Query 024615
Match_columns 265
No_of_seqs 144 out of 1131
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 06:04:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024615.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024615hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02364 L-ascorbate peroxidas 100.0 6.1E-77 1.3E-81 530.8 23.1 249 1-265 1-250 (250)
2 PLN02879 L-ascorbate peroxidas 100.0 1.3E-76 2.9E-81 527.8 22.9 248 1-264 2-249 (251)
3 PLN02608 L-ascorbate peroxidas 100.0 4.1E-75 8.9E-80 526.3 23.0 244 5-264 3-246 (289)
4 cd00691 ascorbate_peroxidase A 100.0 5.5E-71 1.2E-75 494.0 21.3 233 9-264 13-252 (253)
5 PLN03030 cationic peroxidase; 100.0 1.8E-69 3.9E-74 495.8 16.3 229 2-264 31-310 (324)
6 cd00693 secretory_peroxidase H 100.0 6.4E-68 1.4E-72 484.3 18.2 229 2-264 8-285 (298)
7 cd00692 ligninase Ligninase an 100.0 1.3E-62 2.8E-67 452.1 21.9 242 20-264 21-277 (328)
8 cd00649 catalase_peroxidase_1 100.0 1.5E-58 3.2E-63 431.7 18.4 253 11-264 39-397 (409)
9 cd00314 plant_peroxidase_like 100.0 3E-58 6.5E-63 413.0 19.2 239 11-259 2-255 (255)
10 PF00141 peroxidase: Peroxidas 100.0 1.8E-58 3.9E-63 408.9 4.5 198 12-242 1-230 (230)
11 TIGR00198 cat_per_HPI catalase 100.0 1.2E-54 2.6E-59 428.4 18.6 244 15-259 53-397 (716)
12 PRK15061 catalase/hydroperoxid 100.0 1E-52 2.2E-57 412.7 18.3 249 10-259 50-403 (726)
13 cd08201 plant_peroxidase_like_ 100.0 3.2E-51 7E-56 364.6 13.7 209 28-259 37-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 1.3E-48 2.8E-53 351.9 19.0 241 14-261 14-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 6E-43 1.3E-47 345.5 19.1 242 13-261 431-709 (716)
16 PRK15061 catalase/hydroperoxid 100.0 7.1E-42 1.5E-46 336.3 19.6 232 26-261 448-721 (726)
17 COG0376 KatG Catalase (peroxid 100.0 1E-38 2.2E-43 301.7 15.7 247 15-262 68-417 (730)
18 COG0376 KatG Catalase (peroxid 99.8 7.1E-20 1.5E-24 174.2 12.5 232 26-260 458-724 (730)
19 PF08383 Maf_N: Maf N-terminal 34.5 24 0.00051 22.1 1.1 15 147-161 19-34 (35)
20 cd00957 Transaldolase_TalAB Tr 33.0 50 0.0011 30.8 3.6 84 77-163 137-238 (313)
21 PRK12346 transaldolase A; Prov 32.2 50 0.0011 30.9 3.4 86 77-165 138-241 (316)
22 PTZ00411 transaldolase-like pr 29.0 67 0.0015 30.3 3.7 86 77-165 149-252 (333)
23 cd07922 CarBa CarBa is the A s 27.8 31 0.00068 25.7 1.1 30 235-264 19-59 (81)
24 PRK12309 transaldolase/EF-hand 26.2 90 0.0019 30.1 4.1 87 76-165 142-246 (391)
25 PRK05264 transcriptional repre 25.8 45 0.00097 25.5 1.6 32 224-255 34-67 (105)
26 TIGR01911 HesB_rel_seleno HesB 25.3 29 0.00062 26.3 0.5 31 18-58 9-39 (92)
27 cd00490 Met_repressor_MetJ Met 24.9 48 0.001 25.2 1.6 32 224-255 33-66 (103)
28 PRK05269 transaldolase B; Prov 23.7 54 0.0012 30.7 2.0 86 77-165 139-242 (318)
29 cd00439 Transaldolase Transald 23.0 43 0.00094 30.1 1.2 74 76-152 127-208 (252)
30 TIGR00874 talAB transaldolase. 20.6 83 0.0018 29.5 2.6 85 77-164 137-239 (317)
No 1
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=6.1e-77 Score=530.77 Aligned_cols=249 Identities=83% Similarity=1.365 Sum_probs=240.9
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhhhhhcCCchhhHHHHhhcccCcccccCCCCCCCccccChhhhhccccCchHHHHHH
Q 024615 1 MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRL 80 (265)
Q Consensus 1 ~~~~cp~~~~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~ 80 (265)
|+|.||.+.+.+++++++++++|++++.++.++|.+|||+||||++||.....|||||||.+.+|+++++|.+|.+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~~~E~~~~~N~gl~~~~~~ 80 (250)
T PLN02364 1 MTKNYPTVSEDYKKAVEKCRRKLRGLIAEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRFDAEQAHGANSGIHIALRL 80 (250)
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHccccCcCcCCCCCCCCccccccccccCCCccCHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred HHHHHhhCCCCchhHHHHhhhHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHh-cCCChhhhhhh
Q 024615 81 LEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQ-MGLSDKDIVAL 159 (265)
Q Consensus 81 i~~ik~~~~~VS~ADiialaa~~av~~~gGP~~~v~~GR~D~~~~~~~~~lP~~~~~~~~l~~~F~~~-~Gl~~~elVaL 159 (265)
|+.||+++++|||||||+||||+||+++|||.|+|++||+|++++.++++||.|+.++++|++.| ++ +||+++|||||
T Consensus 81 i~~ik~~~~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F-~~~~Gl~~~d~VaL 159 (250)
T PLN02364 81 LDPIREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPPEGRLPDATKGCDHLRDVF-AKQMGLSDKDIVAL 159 (250)
T ss_pred HHHHHHHcCCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccccCCCCCCCcCHHHHHHHH-HHhcCCCHHHheee
Confidence 99999999999999999999999999999999999999999999988889999999999999999 76 69999999999
Q ss_pred cccccccccccCCCCCCCCCCCCCCcccccchhhhhcccCCCcccchhhhhccCcCCcccccccccccCCCChHHHHHHh
Q 024615 160 SGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTYVSLVSLPDMFGCVLELLTGEKDGLLQLPSDKALLDDPVFRPLVEKY 239 (265)
Q Consensus 160 ~GaHTiG~~h~~~~~~~g~~~~tp~~fDN~Yy~~~~~~~~~~~~~~~~~l~~~~~~gl~~l~SD~~L~~d~~t~~~V~~y 239 (265)
+||||||++||.+++|.|+|+.||.+|||+||+ +++.+..+|+++|+||++|+.|++|+++|+.|
T Consensus 160 sGaHTiG~~hc~r~~~~g~~~~tp~~fDn~Yy~---------------~ll~~~~~gll~l~sD~~L~~d~~T~~~v~~~ 224 (250)
T PLN02364 160 SGAHTLGRCHKDRSGFEGAWTSNPLIFDNSYFK---------------ELLSGEKEGLLQLVSDKALLDDPVFRPLVEKY 224 (250)
T ss_pred ecceeeccccCCCCCCCCCCCCCCCccchHHHH---------------HHhcCCcCCCccccchHHHccCchHHHHHHHH
Confidence 999999999999989999999999999999999 88876557999999999999999999999999
Q ss_pred hhChhHHHHHHHHHHHHHHhCCCCCC
Q 024615 240 AADEDAFFADYAEAHLKLSELGFAEA 265 (265)
Q Consensus 240 A~~~~~F~~~F~~Am~Km~~lgv~~~ 265 (265)
|.|++.|+++|++||+||+++|+.++
T Consensus 225 a~~~~~F~~~Fa~Am~Km~~lg~~~~ 250 (250)
T PLN02364 225 AADEDAFFADYAEAHMKLSELGFADA 250 (250)
T ss_pred hhCHHHHHHHHHHHHHHHHccCCCCC
Confidence 99999999999999999999999875
No 2
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=1.3e-76 Score=527.75 Aligned_cols=248 Identities=79% Similarity=1.334 Sum_probs=241.1
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhhhhhcCCchhhHHHHhhcccCcccccCCCCCCCccccChhhhhccccCchHHHHHH
Q 024615 1 MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRL 80 (265)
Q Consensus 1 ~~~~cp~~~~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~ 80 (265)
|.+.||.+.+.+.++++.+|++|++++.++.++|.+|||+||||++||...++|||||||++.+|+++++|.||+.++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~~E~~~~~N~gL~~~~~~ 81 (251)
T PLN02879 2 VKKSYPEVKEEYKKAVQRCKRKLRGLIAEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHPQELAHDANNGLDIAVRL 81 (251)
T ss_pred CcccCCCccHHHHHHHHHHHHHHHHHHhCCCchhHhHHHHHhhhccccCCCCCCCCCeeecChhhccCCCcCChHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred HHHHHhhCCCCchhHHHHhhhHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHhcCCChhhhhhhc
Q 024615 81 LEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS 160 (265)
Q Consensus 81 i~~ik~~~~~VS~ADiialaa~~av~~~gGP~~~v~~GR~D~~~~~~~~~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~ 160 (265)
|++||++++.|||||||+|||++||+.+|||.|+|++||+|+..++++++||.|+.++++|++.| +++||+++|||||+
T Consensus 82 i~~iK~~~~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~~~~lP~p~~~~~~l~~~F-~~~Gl~~~dlVALs 160 (251)
T PLN02879 82 LDPIKELFPILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPEGRLPQATKGVDHLRDVF-GRMGLNDKDIVALS 160 (251)
T ss_pred HHHHHHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCcccCCCCCCCCHHHHHHHH-HHcCCCHHHHeeee
Confidence 99999999999999999999999999999999999999999999988999999999999999999 99999999999999
Q ss_pred ccccccccccCCCCCCCCCCCCCCcccccchhhhhcccCCCcccchhhhhccCcCCcccccccccccCCCChHHHHHHhh
Q 024615 161 GGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTYVSLVSLPDMFGCVLELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYA 240 (265)
Q Consensus 161 GaHTiG~~h~~~~~~~g~~~~tp~~fDN~Yy~~~~~~~~~~~~~~~~~l~~~~~~gl~~l~SD~~L~~d~~t~~~V~~yA 240 (265)
||||||++||.++|+.|+|+.||.+|||+||+ +++.+..+|+++|+||++|+.|++|+++|++||
T Consensus 161 GaHTiG~ah~~r~g~~g~~d~tp~~FDN~Yy~---------------~ll~~~~~gll~L~SD~aL~~D~~t~~~V~~~A 225 (251)
T PLN02879 161 GGHTLGRCHKERSGFEGAWTPNPLIFDNSYFK---------------EILSGEKEGLLQLPTDKALLDDPLFLPFVEKYA 225 (251)
T ss_pred ccccccccccccccCCCCCCCCccceeHHHHH---------------HHHcCCcCCCccchhhHHHhcCCcHHHHHHHHh
Confidence 99999999999999999999999999999999 888765579999999999999999999999999
Q ss_pred hChhHHHHHHHHHHHHHHhCCCCC
Q 024615 241 ADEDAFFADYAEAHLKLSELGFAE 264 (265)
Q Consensus 241 ~~~~~F~~~F~~Am~Km~~lgv~~ 264 (265)
+||++|+++|++||+||++||+.+
T Consensus 226 ~d~~~F~~~Fa~Am~KL~~lg~~~ 249 (251)
T PLN02879 226 ADEDAFFEDYTEAHLKLSELGFAD 249 (251)
T ss_pred hCHHHHHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999976
No 3
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=4.1e-75 Score=526.25 Aligned_cols=244 Identities=69% Similarity=1.160 Sum_probs=235.3
Q ss_pred CCChHHHHHHHHHHHHHHHhhhhhcCCchhhHHHHhhcccCcccccCCCCCCCccccChhhhhccccCchHHHHHHHHHH
Q 024615 5 YPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPF 84 (265)
Q Consensus 5 cp~~~~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~i~~i 84 (265)
.|.+...|-.+|+.+|++|+++++|+.++|.+|||+||||++||.+.+.|||||||++.+|+++++|.||++++++|++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~~E~~~~~N~gL~~g~~vid~i 82 (289)
T PLN02608 3 APVVDAEYLKEIEKARRDLRALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNEEEYSHGANNGLKIAIDLCEPV 82 (289)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecccccCCccccchHHHHHHHHHH
Confidence 58888889999999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred HhhCCCCchhHHHHhhhHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHhcCCChhhhhhhccccc
Q 024615 85 KEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHT 164 (265)
Q Consensus 85 k~~~~~VS~ADiialaa~~av~~~gGP~~~v~~GR~D~~~~~~~~~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~GaHT 164 (265)
|+++|+|||||||+||||+||+++|||.|+|++||+|+++++++++||.|+.+++++++.| +++||+++|||+|+||||
T Consensus 83 K~~~~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~LP~p~~~~~~l~~~F-~~~Gl~~~D~VaLsGAHT 161 (289)
T PLN02608 83 KAKHPKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPEEGRLPDAKKGAKHLRDVF-YRMGLSDKDIVALSGGHT 161 (289)
T ss_pred HHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCccCCCcCCCCCHHHHHHHH-HHcCCCHHHHhhhccccc
Confidence 9999999999999999999999999999999999999999988889999999999999999 999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCcccccchhhhhcccCCCcccchhhhhccCcCCcccccccccccCCCChHHHHHHhhhChh
Q 024615 165 LGRCHKERSGFEGPWTRNPLIFDNSYFTYVSLVSLPDMFGCVLELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADED 244 (265)
Q Consensus 165 iG~~h~~~~~~~g~~~~tp~~fDN~Yy~~~~~~~~~~~~~~~~~l~~~~~~gl~~l~SD~~L~~d~~t~~~V~~yA~~~~ 244 (265)
||++||.+.+|.|+|+.||.+|||+||+ +++.+..+|+++|+||++|+.|++|+++|++||.|++
T Consensus 162 iG~ahc~r~g~~g~~~~Tp~~FDN~Yy~---------------~ll~~~~~gll~L~SD~~L~~d~~T~~~V~~fA~~~~ 226 (289)
T PLN02608 162 LGRAHPERSGFDGPWTKEPLKFDNSYFV---------------ELLKGESEGLLKLPTDKALLEDPEFRPYVELYAKDED 226 (289)
T ss_pred cccccccCCCCCCCCCCCCCccChHHHH---------------HHHcCCcCCccccccCHhhhcChhHHHHHHHHhhCHH
Confidence 9999999888889999999999999999 8887644799888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCC
Q 024615 245 AFFADYAEAHLKLSELGFAE 264 (265)
Q Consensus 245 ~F~~~F~~Am~Km~~lgv~~ 264 (265)
+|+++|++||+||+++||.+
T Consensus 227 ~F~~~Fa~Am~Km~~lgvlt 246 (289)
T PLN02608 227 AFFRDYAESHKKLSELGFTP 246 (289)
T ss_pred HHHHHHHHHHHHHHcCCCCC
Confidence 99999999999999999876
No 4
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=5.5e-71 Score=494.02 Aligned_cols=233 Identities=64% Similarity=1.108 Sum_probs=215.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhcCCchhhHHHHhhcccCcccccCCCCCCCccccChhhhhccccCchHHHHHHHHHHHhhC
Q 024615 9 SEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF 88 (265)
Q Consensus 9 ~~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~i~~ik~~~ 88 (265)
..||+++|+++ +. ++.++|++|||+||||++||++.+.|||||++.+.+|+++++|.+|.+++++|++||+++
T Consensus 13 ~~~V~~~v~~~------~~-~~~~~~~llRl~FHDc~~~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~ 85 (253)
T cd00691 13 LEAARNDIAKL------ID-DKNCAPILVRLAWHDSGTYDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY 85 (253)
T ss_pred HHHHHHHHHHH------HH-cCCcHHHHHHHHHHHHhccccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc
Confidence 34555555555 55 999999999999999999999999999999999889999999999988999999999999
Q ss_pred CCCchhHHHHhhhHHHHHhcCCCCCCCCCCCCCCCCCC---CCCCCCCCCCChHHHHHHHHHhcCCChhhhhhhcccccc
Q 024615 89 PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP---QEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTL 165 (265)
Q Consensus 89 ~~VS~ADiialaa~~av~~~gGP~~~v~~GR~D~~~~~---~~~~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~GaHTi 165 (265)
|+|||||||+||||+||+.+|||.|+|++||+|+.++. ++++||.|+.++++|++.| +++||+++|||+|+|||||
T Consensus 86 ~~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F-~~~Gls~~d~VaLsGaHTi 164 (253)
T cd00691 86 PDISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVF-YRMGFNDQEIVALSGAHTL 164 (253)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHH-HhcCCCHHHHHHhccccee
Confidence 99999999999999999999999999999999999986 5778999999999999999 9999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCcccccchhhhhcccCCCcccchhhhhccCc----CCcccccccccccCCCChHHHHHHhhh
Q 024615 166 GRCHKERSGFEGPWTRNPLIFDNSYFTYVSLVSLPDMFGCVLELLTGEK----DGLLQLPSDKALLDDPVFRPLVEKYAA 241 (265)
Q Consensus 166 G~~h~~~~~~~g~~~~tp~~fDN~Yy~~~~~~~~~~~~~~~~~l~~~~~----~gl~~l~SD~~L~~d~~t~~~V~~yA~ 241 (265)
|++||.++++.|+|+.||.+|||+||+ +++.+++ ++++.|+||++|+.|++|+++|++||+
T Consensus 165 G~a~c~~~~~~g~~~~tp~~FDn~Yy~---------------~ll~~~g~~~~~~~~~L~sD~~L~~d~~t~~~v~~~a~ 229 (253)
T cd00691 165 GRCHKERSGYDGPWTKNPLKFDNSYFK---------------ELLEEDWKLPTPGLLMLPTDKALLEDPKFRPYVELYAK 229 (253)
T ss_pred ecccccCCCCCCCCCCCCCcccHHHHH---------------HHhcCCCccCcCcceechhhHHHHcCccHHHHHHHHhh
Confidence 999998888888999999999999999 8877632 345667899999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHhCCCCC
Q 024615 242 DEDAFFADYAEAHLKLSELGFAE 264 (265)
Q Consensus 242 ~~~~F~~~F~~Am~Km~~lgv~~ 264 (265)
|+++|+++|++||+||+++||..
T Consensus 230 ~~~~F~~~Fa~Am~Km~~l~v~~ 252 (253)
T cd00691 230 DQDAFFKDYAEAHKKLSELGVPF 252 (253)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999975
No 5
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=1.8e-69 Score=495.81 Aligned_cols=229 Identities=28% Similarity=0.420 Sum_probs=208.1
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhhhhhcCCchhhHHHHhhcccCcccccCCCCCCCccccCh---hhhhccccCchHHHH
Q 024615 2 TKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLA---AEQAHSANNGLDIAV 78 (265)
Q Consensus 2 ~~~cp~~~~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgsi~~~---~E~~~~~N~gl~~~~ 78 (265)
.+|||++|+||+++|+++ +.+|+.++|++|||+|||||+ +||||||++. .|+++++|.+| ++|
T Consensus 31 ~~sCP~aE~iV~~~v~~~------~~~d~~~aa~llRL~FHDCfv-------~GCDaSvLl~~~~~Ek~a~~N~~l-~Gf 96 (324)
T PLN03030 31 STTCPQAESIVRKTVQSH------FQSNPAIAPGLLRMHFHDCFV-------RGCDASILIDGSNTEKTALPNLLL-RGY 96 (324)
T ss_pred hCcCCCHHHHHHHHHHHH------HhhCcccchhhhhhhhhhhee-------cCCceEEeeCCCcccccCCCCcCc-chH
Confidence 579999999999999999 999999999999999999998 9999999883 79999999998 599
Q ss_pred HHHHHHHhh----CC-CCchhHHHHhhhHHHHHhcCCCCCCCCCCCCCCCCCC--CCCCCCCCCCChHHHHHHHHHhcCC
Q 024615 79 RLLEPFKEQ----FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP--QEGRLPDAKQGNDHLRQVFGAQMGL 151 (265)
Q Consensus 79 ~~i~~ik~~----~~-~VS~ADiialaa~~av~~~gGP~~~v~~GR~D~~~~~--~~~~lP~~~~~~~~l~~~F~~~~Gl 151 (265)
++|+.||++ || +|||||||++|||+||.++|||.|+|++||+|++++. ..++||.|+.++++|++.| +++||
T Consensus 97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F-~~~Gl 175 (324)
T PLN03030 97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKF-AAKGL 175 (324)
T ss_pred HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHH-HHcCC
Confidence 999999975 88 7999999999999999999999999999999998873 3458999999999999999 99999
Q ss_pred ChhhhhhhcccccccccccCC-----CCCCC-------------------------C-------CCCCCCcccccchhhh
Q 024615 152 SDKDIVALSGGHTLGRCHKER-----SGFEG-------------------------P-------WTRNPLIFDNSYFTYV 194 (265)
Q Consensus 152 ~~~elVaL~GaHTiG~~h~~~-----~~~~g-------------------------~-------~~~tp~~fDN~Yy~~~ 194 (265)
+.+|||+|+||||||++||.. ++|.+ . +..||.+|||+||+
T Consensus 176 ~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~-- 253 (324)
T PLN03030 176 NTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFS-- 253 (324)
T ss_pred CHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHH--
Confidence 999999999999999999962 12211 0 23689999999999
Q ss_pred hcccCCCcccchhhhhccCcCCcccccccccccCCCChHHHHHHhhhCh----hHHHHHHHHHHHHHHhCCCCC
Q 024615 195 SLVSLPDMFGCVLELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADE----DAFFADYAEAHLKLSELGFAE 264 (265)
Q Consensus 195 ~~~~~~~~~~~~~~l~~~~~~gl~~l~SD~~L~~d~~t~~~V~~yA~~~----~~F~~~F~~Am~Km~~lgv~~ 264 (265)
+++.+ +|+|. |||+|+.|++|+++|++||.|+ ++|+++|++||+||++|||.+
T Consensus 254 -------------nll~~--rGlL~--SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlT 310 (324)
T PLN03030 254 -------------NLKNG--RGILE--SDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKT 310 (324)
T ss_pred -------------HHHhc--CCCcC--CchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCC
Confidence 99986 78865 9999999999999999999875 599999999999999999976
No 6
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=6.4e-68 Score=484.26 Aligned_cols=229 Identities=36% Similarity=0.581 Sum_probs=209.2
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhhhhhcCCchhhHHHHhhcccCcccccCCCCCCCccccC------hhhhhccccCchH
Q 024615 2 TKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRL------AAEQAHSANNGLD 75 (265)
Q Consensus 2 ~~~cp~~~~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgsi~~------~~E~~~~~N~gl~ 75 (265)
.++||+||+||+++|+++ +..++.++|++|||+||||++ +||||||++ .+|+++++|.++
T Consensus 8 ~~sCP~~e~iV~~~v~~~------~~~~~~~a~~~lRl~FHDc~v-------~GcDaSill~~~~~~~~E~~~~~N~~l- 73 (298)
T cd00693 8 SKSCPNAESIVRSVVRAA------VKADPRLAAALLRLHFHDCFV-------RGCDASVLLDSTANNTSEKDAPPNLSL- 73 (298)
T ss_pred cCCCCChHHHHHHHHHHH------HHhCCCcCchhhhhhhHhhhc-------cCcceeEEecCCCCCchhccCCCCCCc-
Confidence 579999999999999999 999999999999999999998 999999986 369999999999
Q ss_pred HHHHHHHHHHhh----CC-CCchhHHHHhhhHHHHHhcCCCCCCCCCCCCCCCCCCC--CCCCCCCCCChHHHHHHHHHh
Q 024615 76 IAVRLLEPFKEQ----FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ--EGRLPDAKQGNDHLRQVFGAQ 148 (265)
Q Consensus 76 ~~~~~i~~ik~~----~~-~VS~ADiialaa~~av~~~gGP~~~v~~GR~D~~~~~~--~~~lP~~~~~~~~l~~~F~~~ 148 (265)
++|++|++||++ || .|||||||+||||+||+.+|||.|+|++||+|+..+.+ .++||.|+.+++++++.| ++
T Consensus 74 ~g~~~i~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F-~~ 152 (298)
T cd00693 74 RGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDVGNLPSPFFSVSQLISLF-AS 152 (298)
T ss_pred chhHHHHHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccccCCCCcccCHHHHHHHH-HH
Confidence 599999999975 77 89999999999999999999999999999999987643 368999999999999999 99
Q ss_pred cCCChhhhhhhcccccccccccC----C-CCCCC--------------------CC----------C-CCCCcccccchh
Q 024615 149 MGLSDKDIVALSGGHTLGRCHKE----R-SGFEG--------------------PW----------T-RNPLIFDNSYFT 192 (265)
Q Consensus 149 ~Gl~~~elVaL~GaHTiG~~h~~----~-~~~~g--------------------~~----------~-~tp~~fDN~Yy~ 192 (265)
+||+++|||||+||||||++||. | ++|.| |+ + .||.+|||+||+
T Consensus 153 ~G~~~~d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~ 232 (298)
T cd00693 153 KGLTVTDLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYK 232 (298)
T ss_pred cCCCHHHheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHH
Confidence 99999999999999999999995 2 34422 12 2 789999999999
Q ss_pred hhhcccCCCcccchhhhhccCcCCcccccccccccCCCChHHHHHHhhhChhHHHHHHHHHHHHHHhCCCCC
Q 024615 193 YVSLVSLPDMFGCVLELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 264 (265)
Q Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~gl~~l~SD~~L~~d~~t~~~V~~yA~~~~~F~~~F~~Am~Km~~lgv~~ 264 (265)
+++.+ +|+| +||++|+.|++|+++|++||.||++|+++|++||+||+++||.+
T Consensus 233 ---------------~l~~~--~glL--~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~t 285 (298)
T cd00693 233 ---------------NLLAG--RGLL--TSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLT 285 (298)
T ss_pred ---------------HHHhc--ccCc--cCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCcc
Confidence 88876 6775 59999999999999999999999999999999999999999975
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1.3e-62 Score=452.10 Aligned_cols=242 Identities=31% Similarity=0.475 Sum_probs=205.5
Q ss_pred HHHHhh-hhhcCCc---hhhHHHHhhcccCcccc-----cCCCCCCCccccCh--hhhhccccCchHHHHHHHHHHHhhC
Q 024615 20 KRKLRG-FIAEKNC---APLMLRIAWHSAGTYDV-----KTKTGGPFGTMRLA--AEQAHSANNGLDIAVRLLEPFKEQF 88 (265)
Q Consensus 20 ~~~~~~-~~~~~~~---a~~~lRl~FHDc~~~d~-----s~~~gG~dgsi~~~--~E~~~~~N~gl~~~~~~i~~ik~~~ 88 (265)
+.+|++ +..+..+ |+.+|||+||||++||. ..+.|||||||++. .|+++++|.||+..++.|..+++++
T Consensus 21 ~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~~E~~~~~N~gL~~vvd~lk~~~e~~ 100 (328)
T cd00692 21 LDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDDIETAFHANIGLDEIVEALRPFHQKH 100 (328)
T ss_pred HHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCcccccCCCCCCHHHHHHHHHHHHHhc
Confidence 334443 5555555 56699999999999994 56779999999873 5899999999987777777777776
Q ss_pred CCCchhHHHHhhhHHHHHh-cCCCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHhcCCChhhhhhhcccccccc
Q 024615 89 PTISYADLYQLAGVVGVEV-TGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGR 167 (265)
Q Consensus 89 ~~VS~ADiialaa~~av~~-~gGP~~~v~~GR~D~~~~~~~~~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~GaHTiG~ 167 (265)
+ |||||||+|||++||+. .|||.|+|++||+|++++.++++||.|+.++++|++.| +++||+.+|||+|+||||||+
T Consensus 101 c-VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~~g~LP~p~~sv~~l~~~F-~~~Gf~~~E~VaLsGAHTiG~ 178 (328)
T cd00692 101 N-VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAPDGLVPEPFDSVDKILARF-ADAGFSPDELVALLAAHSVAA 178 (328)
T ss_pred C-cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCcccCCCCCCCCHHHHHHHH-HHcCCCHHHHhhhcccccccc
Confidence 5 99999999999999995 69999999999999999999999999999999999999 999999999999999999999
Q ss_pred cccCCCCCCC-CCCCCCCcccccchhhhhc--ccCCCcccchhhhhccCcCCcccccccccccCCCChHHHHHHhhhChh
Q 024615 168 CHKERSGFEG-PWTRNPLIFDNSYFTYVSL--VSLPDMFGCVLELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADED 244 (265)
Q Consensus 168 ~h~~~~~~~g-~~~~tp~~fDN~Yy~~~~~--~~~~~~~~~~~~l~~~~~~gl~~l~SD~~L~~d~~t~~~V~~yA~~~~ 244 (265)
+|...+.+.| +|+.||.+|||+||+++++ ..+|...+++.+.... .+|+++|+||++|+.|++|+++|++||+||+
T Consensus 179 a~~~Dps~~g~p~D~TP~~FDn~Yf~~ll~~~~~~~g~~~~~~e~~~~-~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~ 257 (328)
T cd00692 179 QDFVDPSIAGTPFDSTPGVFDTQFFIETLLKGTAFPGSGGNQGEVESP-LPGEFRLQSDFLLARDPRTACEWQSFVNNQA 257 (328)
T ss_pred cCCCCCCCCCCCCCCCcchhcHHHHHHHHHcCCCCCCccccccccccC-ccccccccchHHHhcCCcHHHHHHHHhcCHH
Confidence 9976555555 8999999999999997663 2344333332232221 3578889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCC
Q 024615 245 AFFADYAEAHLKLSELGFAE 264 (265)
Q Consensus 245 ~F~~~F~~Am~Km~~lgv~~ 264 (265)
+|+++|++||+||++|||+.
T Consensus 258 ~f~~~Fa~Am~KLs~lgv~~ 277 (328)
T cd00692 258 KMNAAFAAAMLKLSLLGQDN 277 (328)
T ss_pred HHHHHHHHHHHHHHcCCCCc
Confidence 99999999999999999975
No 8
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=1.5e-58 Score=431.71 Aligned_cols=253 Identities=36% Similarity=0.580 Sum_probs=216.7
Q ss_pred HHHHHHHHHHHHHhhhhhcC---------CchhhHHHHhhcccCcccccCCCCCCC-ccccChhhhhccccCchHHHHHH
Q 024615 11 DYKKAVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRL 80 (265)
Q Consensus 11 ~v~~~v~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~~~d~s~~~gG~d-gsi~~~~E~~~~~N~gl~~~~~~ 80 (265)
.=.-.++++|++|++++++. .++|.+|||+||++++||.++++||++ |+|+|.+|.+++.|.||.+++.+
T Consensus 39 ~~~~d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~pe~~~~~N~gL~~a~~~ 118 (409)
T cd00649 39 FKKLDLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFAPLNSWPDNVNLDKARRL 118 (409)
T ss_pred hhhccHHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccccccCcHhhhhHHHHHHH
Confidence 33345788999999999875 699999999999999999999999998 69999999999999999999999
Q ss_pred HHHHHhhCC-CCchhHHHHhhhHHHHHhcCCCCCCCCCCCCCCCCCC---------------------------------
Q 024615 81 LEPFKEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP--------------------------------- 126 (265)
Q Consensus 81 i~~ik~~~~-~VS~ADiialaa~~av~~~gGP~~~v~~GR~D~~~~~--------------------------------- 126 (265)
|++||+++| .||+||+|+||+++||+.+|||.|+|.+||.|+..+.
T Consensus 119 L~pik~k~~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~a~~mg 198 (409)
T cd00649 119 LWPIKQKYGNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLAAVQMG 198 (409)
T ss_pred HHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchhhhhcc
Confidence 999999998 7999999999999999999999999999999996532
Q ss_pred -----CCC--CCCCCCCChHHHHHHHHHhcCCChhhhhhh-cccccccccccCC--------------------------
Q 024615 127 -----QEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKER-------------------------- 172 (265)
Q Consensus 127 -----~~~--~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL-~GaHTiG~~h~~~-------------------------- 172 (265)
+++ .||.|..++.+|++.| .+|||+.+||||| +||||||++||..
T Consensus 199 liyv~Pegp~gLPdP~~sa~~LR~~F-~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg~dP~~~~~~~~gLgw~~~Cp 277 (409)
T cd00649 199 LIYVNPEGPDGNPDPLAAAKDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGPASHVGPEPEAAPIEQQGLGWKNSYG 277 (409)
T ss_pred ccccCCCCCCCCCCCccCHHHHHHHH-HHcCCCHHHHeeeccCCcceeecCcccccccCCCCCCcCHHHHHhhcccccCC
Confidence 233 6999999999999999 9999999999999 5999999999941
Q ss_pred ---------CCCCCCCCCCCCcccccchhhhhc--ccCCC-ccc-chhhhhc-------------cCcCCcccccccccc
Q 024615 173 ---------SGFEGPWTRNPLIFDNSYFTYVSL--VSLPD-MFG-CVLELLT-------------GEKDGLLQLPSDKAL 226 (265)
Q Consensus 173 ---------~~~~g~~~~tp~~fDN~Yy~~~~~--~~~~~-~~~-~~~~l~~-------------~~~~gl~~l~SD~~L 226 (265)
++++|+|+.||.+|||+||+.|+. |.+.. +.| .+|.-.. +.+.++++|+||++|
T Consensus 278 ~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~~~gmL~SD~aL 357 (409)
T cd00649 278 TGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKHAPMMLTTDLAL 357 (409)
T ss_pred CCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCccccccccCcccchhhHhh
Confidence 357789999999999999998776 32221 222 1121110 112366778899999
Q ss_pred cCCCChHHHHHHhhhChhHHHHHHHHHHHHH--HhCCCCC
Q 024615 227 LDDPVFRPLVEKYAADEDAFFADYAEAHLKL--SELGFAE 264 (265)
Q Consensus 227 ~~d~~t~~~V~~yA~~~~~F~~~F~~Am~Km--~~lgv~~ 264 (265)
+.|++++++|++||.|+++|+++|++||.|| ..+|+.+
T Consensus 358 ~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~ 397 (409)
T cd00649 358 RFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKS 397 (409)
T ss_pred hcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchh
Confidence 9999999999999999999999999999999 5777653
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=3e-58 Score=413.03 Aligned_cols=239 Identities=43% Similarity=0.691 Sum_probs=206.5
Q ss_pred HHHHHHHHHHHHHhhhhhcCCchhhHHHHhhcccCcccccC-CCCCCCccccChhhhhccccCchHHHHHHHHHHHhhCC
Q 024615 11 DYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFP 89 (265)
Q Consensus 11 ~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~-~~gG~dgsi~~~~E~~~~~N~gl~~~~~~i~~ik~~~~ 89 (265)
.|++.|++. +.+++.+++++|||+||||++|+... ..|||||||++.+|+++|+|.+|.+++++|++||++++
T Consensus 2 ~v~~~l~~~------~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDL------ITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEPELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHH------HHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccccccCcccccHHHHHHHHHHHHHHcC
Confidence 355666666 66789999999999999999999887 78999999999999999999998889999999999985
Q ss_pred ---CCchhHHHHhhhHHHHHhc--CCCCCCCCCCCCCCC-----CCCCCCCCCCCCCChHHHHHHHHHhcCCChhhhhhh
Q 024615 90 ---TISYADLYQLAGVVGVEVT--GGPDIPFHPGRDDKA-----EPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL 159 (265)
Q Consensus 90 ---~VS~ADiialaa~~av~~~--gGP~~~v~~GR~D~~-----~~~~~~~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL 159 (265)
+|||||||++|+++||+.+ |||.|+|++||+|+. .+.+.+++|.+..+++++++.| .++||+++|||||
T Consensus 76 ~~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F-~~~Gl~~~e~VAL 154 (255)
T cd00314 76 GGNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKF-KRMGLSPSELVAL 154 (255)
T ss_pred CCCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHH-HHcCCCHHHHHhh
Confidence 7999999999999999999 999999999999998 4567788999999999999999 9999999999999
Q ss_pred c-ccccc-cccccCCCCCC--CCCCCCCCcccccchhhhhcccCCCcccchhhhhccCcCCcccccccccccCCCChHHH
Q 024615 160 S-GGHTL-GRCHKERSGFE--GPWTRNPLIFDNSYFTYVSLVSLPDMFGCVLELLTGEKDGLLQLPSDKALLDDPVFRPL 235 (265)
Q Consensus 160 ~-GaHTi-G~~h~~~~~~~--g~~~~tp~~fDN~Yy~~~~~~~~~~~~~~~~~l~~~~~~gl~~l~SD~~L~~d~~t~~~ 235 (265)
+ ||||| |++||...+.. ++|+.||.+|||+||++++...+.+..+.. . ....+++.+|+||+.|+.|++|+++
T Consensus 155 ~~GaHti~G~~~~~~~~~~~~~~~~~tp~~fDN~yy~~l~~~~~~~~~~~~-~--~~~~~~~~~l~sD~~L~~d~~t~~~ 231 (255)
T cd00314 155 SAGAHTLGGKNHGDLLNYEGSGLWTSTPFTFDNAYFKNLLDMNWEWRVGSP-D--PDGVKGPGLLPSDYALLSDSETRAL 231 (255)
T ss_pred ccCCeeccCcccCCCCCcccCCCCCCCCCccchHHHHHHhcCCcccccCCc-c--CCCcccCCCchhhHHHhcCHhHHHH
Confidence 9 99999 99999766544 678999999999999955543222211111 0 0112455667899999999999999
Q ss_pred HHHhhhChhHHHHHHHHHHHHHHh
Q 024615 236 VEKYAADEDAFFADYAEAHLKLSE 259 (265)
Q Consensus 236 V~~yA~~~~~F~~~F~~Am~Km~~ 259 (265)
|++||.|+++|+++|++||+||++
T Consensus 232 v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 232 VERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999974
No 10
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=1.8e-58 Score=408.86 Aligned_cols=198 Identities=42% Similarity=0.727 Sum_probs=171.4
Q ss_pred HHHHHHHHHHHHhhhhhcCCchhhHHHHhhcccCcccccCCCCCCCccccC-hhhhhccccCchHHHHHHHHHHHhh---
Q 024615 12 YKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRL-AAEQAHSANNGLDIAVRLLEPFKEQ--- 87 (265)
Q Consensus 12 v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgsi~~-~~E~~~~~N~gl~~~~~~i~~ik~~--- 87 (265)
||++|+++ +..++.++|++|||+||||++| |||||||++ .+|+++++|.||++++++|++||++
T Consensus 1 Vr~~v~~~------~~~~~~~~~~~lRl~FHDc~~~------~GcDgSil~~~~e~~~~~N~gl~~~~~~i~~ik~~~~~ 68 (230)
T PF00141_consen 1 VRSDVRAA------FKKDPTLAPGLLRLAFHDCFVY------GGCDGSILLFSAEKDAPPNRGLRDGFDVIDPIKAKLEA 68 (230)
T ss_dssp HHHHHHHH------HHHHTTSHHHHHHHHHHHHTTH------TSSSSGGGGSTTGGGSGGGTTHHHHHHHHHHHHHHHCH
T ss_pred CHHHHHHH------HHHCcCccHHHHHHHccccccc------cccccceeccccccccccccCcceeeechhhHHhhhcc
Confidence 56777777 8889999999999999999987 999999976 8899999999998899999999986
Q ss_pred -CC-CCchhHHHHhhhHHHHHhcCCCCCCCCCCCCCCCCCCCCC--CCCCCCCChHHHHHHHHHhcCCChhhhhhhcccc
Q 024615 88 -FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGH 163 (265)
Q Consensus 88 -~~-~VS~ADiialaa~~av~~~gGP~~~v~~GR~D~~~~~~~~--~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~GaH 163 (265)
|| +|||||||++||++||+.+|||.|+|++||+|+.++.+.+ +||.|+.++++|++.| +++||+++|||||+|||
T Consensus 69 ~cp~~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F-~~~Gls~~e~VaLsGaH 147 (230)
T PF00141_consen 69 ACPGVVSCADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGASNLPSPTDSVDQLLAFF-ARKGLSAEEMVALSGAH 147 (230)
T ss_dssp HSTTTS-HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHHHHSSTTTSHHHHHHHHH-HHTT--HHHHHHHHGGG
T ss_pred cccCCCCHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccchhhhhh-hccccchhhhcceeccc
Confidence 67 6999999999999999999999999999999999997643 5999999999999999 99999999999999999
Q ss_pred cccccccCCCC-------------CC-----------CCCCCCCCcccccchhhhhcccCCCcccchhhhhccCcCCccc
Q 024615 164 TLGRCHKERSG-------------FE-----------GPWTRNPLIFDNSYFTYVSLVSLPDMFGCVLELLTGEKDGLLQ 219 (265)
Q Consensus 164 TiG~~h~~~~~-------------~~-----------g~~~~tp~~fDN~Yy~~~~~~~~~~~~~~~~~l~~~~~~gl~~ 219 (265)
|||++||.... |. -+++ ||.+|||+||+ +++.+ +|+|
T Consensus 148 TiG~~~c~~f~rl~~~~dp~~d~~~~~~~C~~~~~~~~~~d-tp~~fDN~Yy~---------------~ll~~--~gll- 208 (230)
T PF00141_consen 148 TIGRAHCSSFSRLYFPPDPTMDPGYAGQNCNSGGDNGVPLD-TPTVFDNSYYK---------------NLLNG--RGLL- 208 (230)
T ss_dssp GSTEESGGCTGGTSCSSGTTSTHHHHHHSSSTSGCTCEESS-STTS-SSHHHH---------------HHHHT--EEEE-
T ss_pred ccccceeccccccccccccccccccceeccCCCcccccccc-CCCcchhHHHH---------------HHhcC--CCcC-
Confidence 99999996211 00 0234 89999999999 88875 6665
Q ss_pred ccccccccCCCChHHHHHHhhhC
Q 024615 220 LPSDKALLDDPVFRPLVEKYAAD 242 (265)
Q Consensus 220 l~SD~~L~~d~~t~~~V~~yA~~ 242 (265)
+||++|+.|++|+++|++||+|
T Consensus 209 -~SD~~L~~d~~t~~~V~~yA~d 230 (230)
T PF00141_consen 209 -PSDQALLNDPETRPIVERYAQD 230 (230)
T ss_dssp -HHHHHHHHSTTHHHHHHHHHHT
T ss_pred -HHHHHHhcCHHHHHHHHHHhcC
Confidence 5999999999999999999986
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.2e-54 Score=428.41 Aligned_cols=244 Identities=36% Similarity=0.610 Sum_probs=209.0
Q ss_pred HHHHHHHHHhhhhhcC---------CchhhHHHHhhcccCcccccCCCCCCC-ccccChhhhhccccCchHHHHHHHHHH
Q 024615 15 AVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPF 84 (265)
Q Consensus 15 ~v~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~~~d~s~~~gG~d-gsi~~~~E~~~~~N~gl~~~~~~i~~i 84 (265)
.++.+|++|+++++++ .++|-+|||+||+++||+.+++.||++ |+|+|.+|.+++.|.+|.+++.+|++|
T Consensus 53 d~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~P~~sw~~N~~Ldka~~lL~pI 132 (716)
T TIGR00198 53 DLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFAPLNSWPDNVNLDKARRLLWPI 132 (716)
T ss_pred cHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecccccCchhhhhHHHHHHHHHHH
Confidence 3556899999999875 689999999999999999999999996 699999999999999999999999999
Q ss_pred HhhCC-CCchhHHHHhhhHHHHHhcCCCCCCCCCCCCCCCCCC-------------------------------------
Q 024615 85 KEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP------------------------------------- 126 (265)
Q Consensus 85 k~~~~-~VS~ADiialaa~~av~~~gGP~~~v~~GR~D~~~~~------------------------------------- 126 (265)
|++|| .|||||||+||+++||+.+|||.|+|.+||+|+..+.
T Consensus 133 k~kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~~~~Gliyvn 212 (716)
T TIGR00198 133 KKKYGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAATEMGLIYVN 212 (716)
T ss_pred HHHCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchhhhccccccC
Confidence 99998 7999999999999999999999999999999995321
Q ss_pred CCC--CCCCCCCChHHHHHHHHHhcCCChhhhhhhc-ccccccccccC--------------------------------
Q 024615 127 QEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLGRCHKE-------------------------------- 171 (265)
Q Consensus 127 ~~~--~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~-GaHTiG~~h~~-------------------------------- 171 (265)
+.+ .+|.|..++.+|++.| .+||||.+|||||+ ||||||++||.
T Consensus 213 peg~~~lPdP~~sa~~Lrd~F-~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rlg~dP~~~~~~~~gLg~~c~~~~g~g~ 291 (716)
T TIGR00198 213 PEGPDGHPDPLCTAQDIRTTF-ARMGMNDEETVALIAGGHTVGKCHGAGPAELIGPDPEGAPIEEQGLGWHNQYGKGVGR 291 (716)
T ss_pred cccccCCCCCCCCHHHHHHHH-HHcCCChHHHeeeecCceeccccCCCcccccCCCCCCcCHHHHHHhcccCCCCCCCCC
Confidence 122 6999999999999999 99999999999995 99999999994
Q ss_pred ---CCCCCCCCCCCCCcccccchhhhhcc--cCCC-ccc-chhhhhc-----------cCcCCcccccccccccCCCChH
Q 024615 172 ---RSGFEGPWTRNPLIFDNSYFTYVSLV--SLPD-MFG-CVLELLT-----------GEKDGLLQLPSDKALLDDPVFR 233 (265)
Q Consensus 172 ---~~~~~g~~~~tp~~fDN~Yy~~~~~~--~~~~-~~~-~~~~l~~-----------~~~~gl~~l~SD~~L~~d~~t~ 233 (265)
.++++|+|+.||.+|||+||++|+.. .+.. +.+ .+|.-.. ..+..+.+|+||++|..|++++
T Consensus 292 dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~~mL~SDlaL~~Dp~~r 371 (716)
T TIGR00198 292 DTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNPIMLDADLALRFDPEFR 371 (716)
T ss_pred CcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccccccccccccCccchhHHhccCccHH
Confidence 13556889999999999999987752 2221 122 1222111 0112355678999999999999
Q ss_pred HHHHHhhhChhHHHHHHHHHHHHHHh
Q 024615 234 PLVEKYAADEDAFFADYAEAHLKLSE 259 (265)
Q Consensus 234 ~~V~~yA~~~~~F~~~F~~Am~Km~~ 259 (265)
++|++||.|++.|+++|++||.||++
T Consensus 372 ~iVe~yA~d~~~F~~dFA~Aw~KL~~ 397 (716)
T TIGR00198 372 KISRRFLREPDYFAEAFAKAWFKLTH 397 (716)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999984
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=1e-52 Score=412.68 Aligned_cols=249 Identities=36% Similarity=0.575 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHHHHhhhhhcC---------CchhhHHHHhhcccCcccccCCCCCCC-ccccChhhhhccccCchHHHHH
Q 024615 10 EDYKKAVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVR 79 (265)
Q Consensus 10 ~~v~~~v~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~~~d~s~~~gG~d-gsi~~~~E~~~~~N~gl~~~~~ 79 (265)
+.=.=.++.+|++|+++++++ .++|-+|||+||+++|||.+++.||++ |+|+|.+|.+++.|.+|.+++.
T Consensus 50 ~~~~ld~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~pe~~w~~N~gL~ka~~ 129 (726)
T PRK15061 50 EFKKLDLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNVNLDKARR 129 (726)
T ss_pred HhchhhHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCcccccchhhhhHHHHHH
Confidence 333345677999999999875 689999999999999999999999997 6999999999999999999999
Q ss_pred HHHHHHhhCC-CCchhHHHHhhhHHHHHhcCCCCCCCCCCCCCCCCCCC-------------------------------
Q 024615 80 LLEPFKEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ------------------------------- 127 (265)
Q Consensus 80 ~i~~ik~~~~-~VS~ADiialaa~~av~~~gGP~~~v~~GR~D~~~~~~------------------------------- 127 (265)
+|++||+++| .||+||+|+||+.+|||.+|||.|+|.+||.|...+..
T Consensus 130 ~L~pik~ky~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl~a~~ 209 (726)
T PRK15061 130 LLWPIKQKYGNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPLAAVQ 209 (726)
T ss_pred HHHHHHHHhCCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccchhhhh
Confidence 9999999998 79999999999999999999999999999999865321
Q ss_pred --------C--CCCCCCCCChHHHHHHHHHhcCCChhhhhhhc-ccccccccccCC------------------------
Q 024615 128 --------E--GRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLGRCHKER------------------------ 172 (265)
Q Consensus 128 --------~--~~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~-GaHTiG~~h~~~------------------------ 172 (265)
+ .-+|+|..++.+|++.| .+|||+.+|||||+ ||||||++||..
T Consensus 210 mgliyvnpegp~glPdP~~sa~~lR~tF-~RMGmnDeEtVALiaGgHT~GkaHca~~~~rlgpdP~~a~~~~qgLgw~~~ 288 (726)
T PRK15061 210 MGLIYVNPEGPNGNPDPLAAARDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGDASHVGPEPEAAPIEEQGLGWKNS 288 (726)
T ss_pred ccceecCCCCCCCCCCcccCHHHHHHHH-HHcCCCHHHheeeccCCceeeeCCCcCcccccCCCCCcCHHHHHhcccccc
Confidence 0 12799999999999999 99999999999995 999999999941
Q ss_pred -----------CCCCCCCCCCCCcccccchhhhhc--ccCCC-ccc-chhhhhc-------------cCcCCcccccccc
Q 024615 173 -----------SGFEGPWTRNPLIFDNSYFTYVSL--VSLPD-MFG-CVLELLT-------------GEKDGLLQLPSDK 224 (265)
Q Consensus 173 -----------~~~~g~~~~tp~~fDN~Yy~~~~~--~~~~~-~~~-~~~~l~~-------------~~~~gl~~l~SD~ 224 (265)
++++|+|+.||.+|||+||+.|+. |.+.. +.| .+|.-.. +.+..+++|+||+
T Consensus 289 c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~~~~~~MLtSD~ 368 (726)
T PRK15061 289 YGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSKKHAPTMLTTDL 368 (726)
T ss_pred CCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCcccccccccCcccccccH
Confidence 356789999999999999998876 33221 222 1221110 1123467788999
Q ss_pred cccCCCChHHHHHHhhhChhHHHHHHHHHHHHHHh
Q 024615 225 ALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSE 259 (265)
Q Consensus 225 ~L~~d~~t~~~V~~yA~~~~~F~~~F~~Am~Km~~ 259 (265)
+|..|+.++++|++|+.|+++|+++|++||.||+.
T Consensus 369 AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~h 403 (726)
T PRK15061 369 ALRFDPEYEKISRRFLENPEEFADAFARAWFKLTH 403 (726)
T ss_pred HhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999954
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=3.2e-51 Score=364.61 Aligned_cols=209 Identities=29% Similarity=0.445 Sum_probs=178.0
Q ss_pred hcCCchhhHHHHhhcccCcccccCCCCCCCccccChhhhhccccCchH--HHHHHHHHHHhhCCCCchhHHHHhhhHHHH
Q 024615 28 AEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLD--IAVRLLEPFKEQFPTISYADLYQLAGVVGV 105 (265)
Q Consensus 28 ~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgsi~~~~E~~~~~N~gl~--~~~~~i~~ik~~~~~VS~ADiialaa~~av 105 (265)
.++.+++.+|||+||||++||...+.|||||||++ |...++|.|+. ..+..++.|+. +.|||||||+|||++||
T Consensus 37 ~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIll--e~~~~En~G~~~n~~l~~~~~i~~--~~VScADiialAa~~AV 112 (264)
T cd08201 37 PGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQY--ELDRPENIGSGFNTTLNFFVNFYS--PRSSMADLIAMGVVTSV 112 (264)
T ss_pred CCccHHHHHHHHHHHhhcCcccCCCCCCCCcceee--cCCChhhccCchhhccccceeecc--CccCHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999998 56788888775 23444444432 47999999999999999
Q ss_pred HhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHhcCCChhhhhhhcc-cccccccccCCC------CCC--
Q 024615 106 EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSG-GHTLGRCHKERS------GFE-- 176 (265)
Q Consensus 106 ~~~gGP~~~v~~GR~D~~~~~~~~~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~G-aHTiG~~h~~~~------~~~-- 176 (265)
+.+|||.|+|++||+|++++.+.+ ||.|+.++++|++.| +++||+++|||+|+| |||||++||..+ ++.
T Consensus 113 ~~~GGP~i~v~~GR~Da~~s~~~g-lP~P~~~v~~l~~~F-a~~Gfs~~DmVaLsggaHTiG~ahc~~f~~~~~~g~~~~ 190 (264)
T cd08201 113 ASCGGPVVPFRAGRIDATEAGQAG-VPEPQTDLGTTTESF-RRQGFSTSEMIALVACGHTLGGVHSEDFPEIVPPGSVPD 190 (264)
T ss_pred HHcCCCeecccccCCCcccccccc-CCCCccCHHHHHHHH-HHcCCChHHHheeecCCeeeeecccccchhhcCCccccC
Confidence 999999999999999999998876 999999999999999 999999999999995 999999999764 443
Q ss_pred C--CCCCCCCcccccchhhhhcccCCCcccchhhhhccCcCCcccc------cccccccCCCChHHHHHHhhhChhHHHH
Q 024615 177 G--PWTRNPLIFDNSYFTYVSLVSLPDMFGCVLELLTGEKDGLLQL------PSDKALLDDPVFRPLVEKYAADEDAFFA 248 (265)
Q Consensus 177 g--~~~~tp~~fDN~Yy~~~~~~~~~~~~~~~~~l~~~~~~gl~~l------~SD~~L~~d~~t~~~V~~yA~~~~~F~~ 248 (265)
+ ||+.||.+|||+||. ++++|.++|+|++ .||..++....= .-++..| +++.|.+
T Consensus 191 ~~~p~dstp~~FDn~~f~---------------E~l~g~~~~~L~~~~~~~~~sd~r~f~~d~n-~t~~~l~-~~~~f~~ 253 (264)
T cd08201 191 TVLQFFDTTIQFDNKVVT---------------EYLSGTTNNPLVVGPNNTTNSDLRIFSSDGN-VTMNELA-SPDTFQK 253 (264)
T ss_pred CCCCCCCCccccchHHHH---------------HHhcCCCCCceeecCCCCccchhhheecCcc-HHHHHhc-ChHHHHH
Confidence 3 899999999999999 7777766677654 588888864432 2345565 7899999
Q ss_pred HHHHHHHHHHh
Q 024615 249 DYAEAHLKLSE 259 (265)
Q Consensus 249 ~F~~Am~Km~~ 259 (265)
..+..+.||.+
T Consensus 254 ~c~~~~~~mi~ 264 (264)
T cd08201 254 TCADILQRMID 264 (264)
T ss_pred HHHHHHHHHhC
Confidence 99999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=1.3e-48 Score=351.91 Aligned_cols=241 Identities=27% Similarity=0.402 Sum_probs=196.7
Q ss_pred HHHHHHHHHHhhhhhcCCchhhHHHHhhcccCcccccCCCCCCCcc-ccChhhhhccccCc--hHHHHHHHHHHHhhCC-
Q 024615 14 KAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSANNG--LDIAVRLLEPFKEQFP- 89 (265)
Q Consensus 14 ~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgs-i~~~~E~~~~~N~g--l~~~~~~i~~ik~~~~- 89 (265)
+.|...|++ ++....+++.+|||+||++++||.+++.||+||+ |++.+|++|+.|.+ |.+++.+|++||+++|
T Consensus 14 ~di~~lk~~---i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 14 ADIAALKAK---ILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLAPQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHH---HHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCccccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 344444333 4555678999999999999999999999999985 99999999999999 9999999999999997
Q ss_pred ------CCchhHHHHhhhHHHHHhcCC-----CCCCCCCCCCCCCCCCC--C---CCCCCCCC------------ChHHH
Q 024615 90 ------TISYADLYQLAGVVGVEVTGG-----PDIPFHPGRDDKAEPPQ--E---GRLPDAKQ------------GNDHL 141 (265)
Q Consensus 90 ------~VS~ADiialaa~~av~~~gG-----P~~~v~~GR~D~~~~~~--~---~~lP~~~~------------~~~~l 141 (265)
.||.||+|+||+.+|||.+|| |.|+|.+||.|+..+.. + .++|.+.. ..+.|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 799999999999999999999 99999999999987532 1 24454322 33679
Q ss_pred HHHHHHhcCCChhhhhhhcccc-cccccccCCCCCCCCCCCCCCcccccchhhhhccc--CCCc-c-cchhhhhccCcCC
Q 024615 142 RQVFGAQMGLSDKDIVALSGGH-TLGRCHKERSGFEGPWTRNPLIFDNSYFTYVSLVS--LPDM-F-GCVLELLTGEKDG 216 (265)
Q Consensus 142 ~~~F~~~~Gl~~~elVaL~GaH-TiG~~h~~~~~~~g~~~~tp~~fDN~Yy~~~~~~~--~~~~-~-~~~~~l~~~~~~g 216 (265)
++.| .++|||+.|||||+||| ++|++|. ++ +.|+||.+|.+|||.||++|+..+ +... . .++.+... +..|
T Consensus 171 rd~f-~rlglsd~EmvaL~Gg~r~lG~~~~-~s-~~G~wT~~p~~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~d-r~~g 246 (297)
T cd08200 171 VDKA-QLLTLTAPEMTVLVGGLRVLGANYG-GS-KHGVFTDRPGVLTNDFFVNLLDMSTEWKPADEDDGLFEGRD-RKTG 246 (297)
T ss_pred HHHH-HhCCCChHHHhheecchhhcccCCC-CC-CCCCCcCCCCccccHHHHHHhcccceeeecCCCCCceeecc-CCCC
Confidence 9999 99999999999999998 7999997 55 469999999999999999776422 1110 1 11111111 1112
Q ss_pred ---cccccccccccCCCChHHHHHHhhhC--hhHHHHHHHHHHHHHHhCC
Q 024615 217 ---LLQLPSDKALLDDPVFRPLVEKYAAD--EDAFFADYAEAHLKLSELG 261 (265)
Q Consensus 217 ---l~~l~SD~~L~~d~~t~~~V~~yA~~--~~~F~~~F~~Am~Km~~lg 261 (265)
++++++|..|..|+++|++|+.||+| +++|++||++||.||.++.
T Consensus 247 ~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klmeld 296 (297)
T cd08200 247 EVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTKVMNLD 296 (297)
T ss_pred ceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhcC
Confidence 34578999999999999999999999 9999999999999999874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=6e-43 Score=345.51 Aligned_cols=242 Identities=26% Similarity=0.393 Sum_probs=195.3
Q ss_pred HHHHHHHHHHHhhhhhcCCchhhHHHHhhcccCcccccCCCCCCCcc-ccChhhhhcccc--CchHHHHHHHHHHHhhCC
Q 024615 13 KKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSAN--NGLDIAVRLLEPFKEQFP 89 (265)
Q Consensus 13 ~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgs-i~~~~E~~~~~N--~gl~~~~~~i~~ik~~~~ 89 (265)
++.|...|. +++.+...++.||||+||++.|||.++++||+||. |++.+|++++.| .+|.+++++|++||+++|
T Consensus 431 ~~di~~lk~---~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~pe~~w~~N~p~gL~~vl~~Le~Ik~~f~ 507 (716)
T TIGR00198 431 EGDIKELKQ---QILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLEPQKNWPVNEPTRLAKVLAVLEKIQAEFA 507 (716)
T ss_pred HHHHHHHHH---HHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecchhcCcccCCHHHHHHHHHHHHHHHHHcC
Confidence 444444433 24566678899999999999999999999999995 999999999999 899999999999999999
Q ss_pred --CCchhHHHHhhhHHHHHhc---CCC--CCCCCCCCCCCCCCC--CCCCCC---C------------CCCChHHHHHHH
Q 024615 90 --TISYADLYQLAGVVGVEVT---GGP--DIPFHPGRDDKAEPP--QEGRLP---D------------AKQGNDHLRQVF 145 (265)
Q Consensus 90 --~VS~ADiialaa~~av~~~---gGP--~~~v~~GR~D~~~~~--~~~~lP---~------------~~~~~~~l~~~F 145 (265)
.||.||+|+||+.+|||.+ ||| .++|.+||.|++... +++..| . .....+.|++.|
T Consensus 508 ~~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~td~~~~~~l~p~adgfRn~~~~~~~~~~~~~l~d~a 587 (716)
T TIGR00198 508 KGPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMTDAESFTPLEPIADGFRNYLKRDYAVTPEELLLDKA 587 (716)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCCCccccccCCCCCcccchhccccccCCHHHHHHHHH
Confidence 8999999999999999998 897 689999999998763 222222 1 112345589999
Q ss_pred HHhcCCChhhhhhhcccc-cccccccCCCCCCCCCCCCCCcccccchhhhhcccCCC--cccchhhhhcc--CcCCc---
Q 024615 146 GAQMGLSDKDIVALSGGH-TLGRCHKERSGFEGPWTRNPLIFDNSYFTYVSLVSLPD--MFGCVLELLTG--EKDGL--- 217 (265)
Q Consensus 146 ~~~~Gl~~~elVaL~GaH-TiG~~h~~~~~~~g~~~~tp~~fDN~Yy~~~~~~~~~~--~~~~~~~l~~~--~~~gl--- 217 (265)
..+|||+.|||||+||| ++|++|.. + +.|+||.+|.+|||.||++|+.....+ .... ...+.+ +..|.
T Consensus 588 -~~lglt~~EmvaL~Gg~r~lG~~~~~-s-~~G~~T~~p~~f~NdfF~~LLd~~~~w~~~~~~-~~~~~~~dr~tg~~~~ 663 (716)
T TIGR00198 588 -QLLTLTAPEMTVLIGGMRVLGANHGG-S-KHGVFTDRVGVLSNDFFVNLLDMAYEWRAADNN-RYLFEGGDRQTGEVKW 663 (716)
T ss_pred -HhCCCChHHHHheecchhhccccCCC-C-CCCCCcCCCCccccHHHHHHhcCCceeeecCCC-CceeeeecCCCCceee
Confidence 99999999999999995 99999983 3 469999999999999999776532111 1110 012222 11233
Q ss_pred ccccccccccCCCChHHHHHHhhhCh--hHHHHHHHHHHHHHHhCC
Q 024615 218 LQLPSDKALLDDPVFRPLVEKYAADE--DAFFADYAEAHLKLSELG 261 (265)
Q Consensus 218 ~~l~SD~~L~~d~~t~~~V~~yA~~~--~~F~~~F~~Am~Km~~lg 261 (265)
+.+++|..|.+|+++|++|+.||+|+ +.|++||++||.|+.++|
T Consensus 664 ~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~Aw~Klm~ld 709 (716)
T TIGR00198 664 TATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVAAWTKVMNLD 709 (716)
T ss_pred ccChhheeeccCHHHHHHHHHHhcccccchHHHHHHHHHHHHHhCC
Confidence 33478999999999999999999997 899999999999999987
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=7.1e-42 Score=336.28 Aligned_cols=232 Identities=28% Similarity=0.421 Sum_probs=191.9
Q ss_pred hhhcCCchhhHHHHhhcccCcccccCCCCCCCcc-ccChhhhhccccC--chHHHHHHHHHHHhhC-------CCCchhH
Q 024615 26 FIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSANN--GLDIAVRLLEPFKEQF-------PTISYAD 95 (265)
Q Consensus 26 ~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgs-i~~~~E~~~~~N~--gl~~~~~~i~~ik~~~-------~~VS~AD 95 (265)
++...-..+.|||++||++.+||.+++.||+||. |++.+|++++.|+ +|.+++++|++||+++ |.||.||
T Consensus 448 i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~~~~~~~~vS~AD 527 (726)
T PRK15061 448 ILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNEPAQLAKVLAVLEGIQAEFNAAQSGGKKVSLAD 527 (726)
T ss_pred HHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecccccCccccCHHHHHHHHHHHHHHHHHHhhccCCCCceeHHH
Confidence 4555667899999999999999999999999985 9999999999999 9999999999999997 6799999
Q ss_pred HHHhhhHHHHHhc---CC--CCCCCCCCCCCCCCCCC--C---CCCCCCC------------CChHHHHHHHHHhcCCCh
Q 024615 96 LYQLAGVVGVEVT---GG--PDIPFHPGRDDKAEPPQ--E---GRLPDAK------------QGNDHLRQVFGAQMGLSD 153 (265)
Q Consensus 96 iialaa~~av~~~---gG--P~~~v~~GR~D~~~~~~--~---~~lP~~~------------~~~~~l~~~F~~~~Gl~~ 153 (265)
+|+||+.+|||.+ || |.|||.+||.|++.... + .++|... ...+.|++.| .++|||+
T Consensus 528 LivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td~esf~~l~P~Adgfrny~~~~~~~~~e~~L~d~a-~~lglt~ 606 (726)
T PRK15061 528 LIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTDVESFAVLEPKADGFRNYLKKGYSVSPEELLVDKA-QLLTLTA 606 (726)
T ss_pred HHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCCcccccccCCCCccccccccccCCCCHHHHHHHHH-HhCCCCh
Confidence 9999999999998 58 99999999999987632 2 2567543 1236699999 9999999
Q ss_pred hhhhhhcccc-cccccccCCCCCCCCCCCCCCcccccchhhhhcccCCC--cccchhhhhcc--CcCC-cc--ccccccc
Q 024615 154 KDIVALSGGH-TLGRCHKERSGFEGPWTRNPLIFDNSYFTYVSLVSLPD--MFGCVLELLTG--EKDG-LL--QLPSDKA 225 (265)
Q Consensus 154 ~elVaL~GaH-TiG~~h~~~~~~~g~~~~tp~~fDN~Yy~~~~~~~~~~--~~~~~~~l~~~--~~~g-l~--~l~SD~~ 225 (265)
.|||||+||| ++|++|. ++ +.|+||.+|.+|||.||++|+.....+ .... ..++.+ ++.| +. .+++|..
T Consensus 607 ~EmvaL~Gg~r~Lg~~~~-~S-~~G~~T~~p~~fsNdfFvnLLdm~~~W~~~~~~-~~~ye~~Dr~tg~~~~~~t~~Dlv 683 (726)
T PRK15061 607 PEMTVLVGGLRVLGANYG-GS-KHGVFTDRPGVLTNDFFVNLLDMGTEWKPTDED-EEVYEGRDRKTGEVKWTATRVDLV 683 (726)
T ss_pred HHHhheecchhhcccCCC-CC-CCCCCcCCCCccccHHHHHHhcCCceeeecCCC-CCceeeccCCCcceeeccChhhee
Confidence 9999999997 7899995 45 469999999999999999776432211 1000 012222 1123 22 2578999
Q ss_pred ccCCCChHHHHHHhhhC--hhHHHHHHHHHHHHHHhCC
Q 024615 226 LLDDPVFRPLVEKYAAD--EDAFFADYAEAHLKLSELG 261 (265)
Q Consensus 226 L~~d~~t~~~V~~yA~~--~~~F~~~F~~Am~Km~~lg 261 (265)
|.+|++.|++|+.||+| +++|++||++||.|+.++|
T Consensus 684 fgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvmeld 721 (726)
T PRK15061 684 FGSNSQLRALAEVYASDDAKEKFVRDFVAAWTKVMNLD 721 (726)
T ss_pred cccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCC
Confidence 99999999999999999 9999999999999999987
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-38 Score=301.67 Aligned_cols=247 Identities=36% Similarity=0.602 Sum_probs=210.8
Q ss_pred HHHHHHHHHhhhhhcC---------CchhhHHHHhhcccCcccccCCCCCCC-ccccChhhhhccccCchHHHHHHHHHH
Q 024615 15 AVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPF 84 (265)
Q Consensus 15 ~v~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~~~d~s~~~gG~d-gsi~~~~E~~~~~N~gl~~~~~~i~~i 84 (265)
.+...|++|+++..+. ..+|.+|||+||-+++|+..++.||.. |..+|.++.++|.|.+|++++.+|.+|
T Consensus 68 D~~Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G~qRFaPlnSWPDN~nLDKarRLLWPI 147 (730)
T COG0376 68 DLAAVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNANLDKARRLLWPI 147 (730)
T ss_pred cHHHHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCCceecccccCCCcccchHHHHHHhhhH
Confidence 4556899999998875 368999999999999999999999987 599999999999999999999999999
Q ss_pred HhhCC-CCchhHHHHhhhHHHHHhcCCCCCCCCCCCCCCCCCCC------------------------------------
Q 024615 85 KEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ------------------------------------ 127 (265)
Q Consensus 85 k~~~~-~VS~ADiialaa~~av~~~gGP~~~v~~GR~D~~~~~~------------------------------------ 127 (265)
|++|+ .||+||+|+|++.+|++.+|++.+.|..||.|-..+..
T Consensus 148 KkKYG~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~PlaavqMGLIYV 227 (730)
T COG0376 148 KKKYGRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQMGLIYV 227 (730)
T ss_pred hHhhcccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhheeeeEEe
Confidence 99999 89999999999999999999999999999999877632
Q ss_pred --C--CCCCCCCCChHHHHHHHHHhcCCChhhhhhhc-ccccccccccCC------------------------------
Q 024615 128 --E--GRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLGRCHKER------------------------------ 172 (265)
Q Consensus 128 --~--~~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~-GaHTiG~~h~~~------------------------------ 172 (265)
+ +..|+|..+..+++..| ++|+++.+|.|||+ ||||+|++|...
T Consensus 228 NPEGpng~PDpl~aA~dIRetF-aRMaMNDeETVALiaGGHtfGKtHGag~a~~vg~ePe~a~ie~qGlGW~~~~g~G~G 306 (730)
T COG0376 228 NPEGPNGNPDPLAAARDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGPASNVGPEPEAAPIEQQGLGWANTYGSGKG 306 (730)
T ss_pred CCCCCCCCCChhhhHHHHHHHH-HHhcCCcHhhhhhhhcccccccccCCCchhhcCCCccccchhhhccccccccCCCcC
Confidence 1 24688888899999999 99999999999997 799999999742
Q ss_pred -----CCCCCCCCCCCCcccccchhhhhc--ccCCC-ccc-chhhhhc-----------c-CcCCcccccccccccCCCC
Q 024615 173 -----SGFEGPWTRNPLIFDNSYFTYVSL--VSLPD-MFG-CVLELLT-----------G-EKDGLLQLPSDKALLDDPV 231 (265)
Q Consensus 173 -----~~~~g~~~~tp~~fDN~Yy~~~~~--~~~~~-~~~-~~~~l~~-----------~-~~~gl~~l~SD~~L~~d~~ 231 (265)
+|.+++|+.+|++|||.||..|+. |.+.. +.+ .+|.-.. . .+..++||.+|.+|..||.
T Consensus 307 ~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~MlttDlaLr~DP~ 386 (730)
T COG0376 307 PDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTTDLALRFDPE 386 (730)
T ss_pred cccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeeccchhhhcChH
Confidence 123567999999999999998886 44443 222 2222111 0 1236788999999999999
Q ss_pred hHHHHHHhhhChhHHHHHHHHHHHHHHhCCC
Q 024615 232 FRPLVEKYAADEDAFFADYAEAHLKLSELGF 262 (265)
Q Consensus 232 t~~~V~~yA~~~~~F~~~F~~Am~Km~~lgv 262 (265)
.+.+.++|..|++.|.+.|++||.||..-..
T Consensus 387 Y~kIs~rf~e~pd~F~~~FArAWfKLtHRDM 417 (730)
T COG0376 387 YEKISRRFLEDPDEFADAFARAWFKLTHRDM 417 (730)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999999999999986544
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.82 E-value=7.1e-20 Score=174.25 Aligned_cols=232 Identities=28% Similarity=0.424 Sum_probs=177.5
Q ss_pred hhhcCCchhhHHHHhhcccCcccccCCCCCCCc-cccChhhhhccccC--chHHHHHHHHHHHhhCC-CCchhHHHHhhh
Q 024615 26 FIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFG-TMRLAAEQAHSANN--GLDIAVRLLEPFKEQFP-TISYADLYQLAG 101 (265)
Q Consensus 26 ~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dg-si~~~~E~~~~~N~--gl~~~~~~i~~ik~~~~-~VS~ADiialaa 101 (265)
|+.+.-..+.++..+|-.+.+|..|++.||+|| .|++.+.++|+.|. .|.+.+.+++.|.+++. .||.||+|+|++
T Consensus 458 IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLaPqkdWevN~P~~l~kvl~~le~iq~~fnkkvSlADlIVL~G 537 (730)
T COG0376 458 ILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNQPAELAKVLAVLEKIQKEFNKKVSLADLIVLGG 537 (730)
T ss_pred HHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeecccccCCCCCHHHHHHHHHHHHHHHHHhcCccchhHheeecc
Confidence 555666788999999999999999999999998 99999999999996 57788999999999987 699999999999
Q ss_pred HHHHHhc---CCC--CCCCCCCCCCCCCCCC------------CC--C-C-CCCCCChH-HHHHHHHHhcCCChhhhhhh
Q 024615 102 VVGVEVT---GGP--DIPFHPGRDDKAEPPQ------------EG--R-L-PDAKQGND-HLRQVFGAQMGLSDKDIVAL 159 (265)
Q Consensus 102 ~~av~~~---gGP--~~~v~~GR~D~~~~~~------------~~--~-l-P~~~~~~~-~l~~~F~~~~Gl~~~elVaL 159 (265)
..||+.+ +|- .+||.+||.|++.... ++ | + .....+.+ -|+++- +..+||..||++|
T Consensus 538 ~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvDkA-qlL~LtapemtVL 616 (730)
T COG0376 538 NAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVDKA-QLLTLTAPEMTVL 616 (730)
T ss_pred hHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHHHH-HHhccCCccceEE
Confidence 9999974 454 6788999999977521 11 0 1 11122333 378888 8999999999999
Q ss_pred cccc-cccccccCCCCCCCCCCCCCCcccccchhhhhcccCCC-cccchhhhhccC--cCCcc---cccccccccCCCCh
Q 024615 160 SGGH-TLGRCHKERSGFEGPWTRNPLIFDNSYFTYVSLVSLPD-MFGCVLELLTGE--KDGLL---QLPSDKALLDDPVF 232 (265)
Q Consensus 160 ~GaH-TiG~~h~~~~~~~g~~~~tp~~fDN~Yy~~~~~~~~~~-~~~~~~~l~~~~--~~gl~---~l~SD~~L~~d~~t 232 (265)
+||. -+|..+.. + -.|.+|..|.++.|.||..|+.+...+ +.....++++|+ +.|-+ ....|..+-+++..
T Consensus 617 iGGlRvLg~n~g~-s-~~GVfT~~pg~LtndFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~L 694 (730)
T COG0376 617 IGGLRVLGANYGG-S-KHGVFTDRPGVLTNDFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSEL 694 (730)
T ss_pred EcceEeeccCCCC-C-ccceeccCcccccchhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHH
Confidence 9987 55554432 1 247889999999999999666543332 122112344432 22322 23479999999999
Q ss_pred HHHHHHhhhC--hhHHHHHHHHHHHHHHhC
Q 024615 233 RPLVEKYAAD--EDAFFADYAEAHLKLSEL 260 (265)
Q Consensus 233 ~~~V~~yA~~--~~~F~~~F~~Am~Km~~l 260 (265)
|++.+-||++ ++.|.+||+.||.|..++
T Consensus 695 RA~aEVYa~dda~ekFv~DFvaaw~kVMn~ 724 (730)
T COG0376 695 RALAEVYASDDAKEKFVKDFVAAWTKVMNL 724 (730)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHhcc
Confidence 9999999986 789999999999998765
No 19
>PF08383 Maf_N: Maf N-terminal region; InterPro: IPR013592 This region is found in various leucine zipper transcription factors of the Maf family. These are implicated in the regulation of insulin gene expression [], in erythroid differentiation [], and in differentiation of the neuroretina [].
Probab=34.50 E-value=24 Score=22.11 Aligned_cols=15 Identities=47% Similarity=0.749 Sum_probs=12.1
Q ss_pred HhcCCChhhhh-hhcc
Q 024615 147 AQMGLSDKDIV-ALSG 161 (265)
Q Consensus 147 ~~~Gl~~~elV-aL~G 161 (265)
...|||++|.| ||+|
T Consensus 19 e~l~LtpEDAvEaLi~ 34 (35)
T PF08383_consen 19 EALGLTPEDAVEALIG 34 (35)
T ss_pred hhcCCCHHHHHHHHhc
Confidence 56789999988 7776
No 20
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.
Probab=33.00 E-value=50 Score=30.83 Aligned_cols=84 Identities=14% Similarity=0.141 Sum_probs=48.2
Q ss_pred HHHHHHHHHhhCCCCchhHHHHhhhHHHHHh--cCCCCCCCCCCCCCCCCCCCCC--CCCC----CCCChHHHHHHHHHh
Q 024615 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVEV--TGGPDIPFHPGRDDKAEPPQEG--RLPD----AKQGNDHLRQVFGAQ 148 (265)
Q Consensus 77 ~~~~i~~ik~~~~~VS~ADiialaa~~av~~--~gGP~~~v~~GR~D~~~~~~~~--~lP~----~~~~~~~l~~~F~~~ 148 (265)
|+..+..++++ .|+|-=.+.+....|+.. +|-..+..+.||.|-..-...+ ..+. +-..+.++.+.| ++
T Consensus 137 Gi~A~~~L~~~--GI~vn~TlvFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~d~Gv~~v~~i~~~~-~~ 213 (313)
T cd00957 137 GIQAAKQLEKE--GIHCNLTLLFSFAQAVACAEAGVTLISPFVGRILDWYKKHSGDKAYTAEEDPGVASVKKIYNYY-KK 213 (313)
T ss_pred HHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEeecchHHHhhhhccccccCCccCCcHHHHHHHHHHHH-HH
Confidence 55555555543 444444444554444443 5777889999999865321111 1111 112456677888 88
Q ss_pred cCCC----------hhhhhhhcccc
Q 024615 149 MGLS----------DKDIVALSGGH 163 (265)
Q Consensus 149 ~Gl~----------~~elVaL~GaH 163 (265)
.|+. ..|+..|.|+|
T Consensus 214 ~~~~T~vmaASfRn~~~v~~laG~d 238 (313)
T cd00957 214 FGYKTKVMGASFRNIGQILALAGCD 238 (313)
T ss_pred cCCCcEEEecccCCHHHHHHHhCCC
Confidence 8864 56777777777
No 21
>PRK12346 transaldolase A; Provisional
Probab=32.19 E-value=50 Score=30.89 Aligned_cols=86 Identities=15% Similarity=0.115 Sum_probs=50.9
Q ss_pred HHHHHHHHHhhCCCCchhHHHHhhhHHHHH--hcCCCCCCCCCCCCCCCCCCC--CCCC-CCCC---CChHHHHHHHHHh
Q 024615 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQ--EGRL-PDAK---QGNDHLRQVFGAQ 148 (265)
Q Consensus 77 ~~~~i~~ik~~~~~VS~ADiialaa~~av~--~~gGP~~~v~~GR~D~~~~~~--~~~l-P~~~---~~~~~l~~~F~~~ 148 (265)
|+..+..++++ .|+|-=.+.+....|+. .+|-..+..+.||.|.+.-.. ...+ |... ..+.++.+.| ++
T Consensus 138 Gi~A~~~L~~~--GI~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~-k~ 214 (316)
T PRK12346 138 GIRAAEELEKE--GINCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYY-KQ 214 (316)
T ss_pred HHHHHHHHHHC--CCceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhccccccccccCCChHHHHHHHHHHH-HH
Confidence 45555555543 45554444555554444 367788999999998753211 1112 1112 2456677888 77
Q ss_pred cCCC----------hhhhhhhcccccc
Q 024615 149 MGLS----------DKDIVALSGGHTL 165 (265)
Q Consensus 149 ~Gl~----------~~elVaL~GaHTi 165 (265)
.|+. ..|+.+|.|+|.+
T Consensus 215 ~~~~T~Vm~ASfRn~~qi~alaG~d~l 241 (316)
T PRK12346 215 HRYETIVMGASFRRTEQILALAGCDRL 241 (316)
T ss_pred cCCCcEEEecccCCHHHHHHHhCCCEE
Confidence 7753 5788888888843
No 22
>PTZ00411 transaldolase-like protein; Provisional
Probab=29.02 E-value=67 Score=30.27 Aligned_cols=86 Identities=14% Similarity=0.130 Sum_probs=48.8
Q ss_pred HHHHHHHHHhhCCCCchhHHHHhhhHHHHH--hcCCCCCCCCCCCCCCCCCCCC---CCCCCCC---CChHHHHHHHHHh
Q 024615 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQE---GRLPDAK---QGNDHLRQVFGAQ 148 (265)
Q Consensus 77 ~~~~i~~ik~~~~~VS~ADiialaa~~av~--~~gGP~~~v~~GR~D~~~~~~~---~~lP~~~---~~~~~l~~~F~~~ 148 (265)
|+..+..++++ .|.|-=.+.+....|+. .+|-..+..+.||.+.+.-.+. ...+... ..+.++...| ++
T Consensus 149 Gi~Aa~~L~~e--GI~~N~TlvFS~~QA~aaaeAGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~-k~ 225 (333)
T PTZ00411 149 GIQAAKALEKE--GIHCNLTLLFSFAQAVACAQAGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYY-KK 225 (333)
T ss_pred HHHHHHHHHHC--CCceeEeEecCHHHHHHHHHcCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHH-HH
Confidence 55555555543 34443333444444433 3577788999999966533211 1112122 2355677788 77
Q ss_pred cCC----------Chhhhhhhcccccc
Q 024615 149 MGL----------SDKDIVALSGGHTL 165 (265)
Q Consensus 149 ~Gl----------~~~elVaL~GaHTi 165 (265)
.|+ +.+|+..|.|+|.+
T Consensus 226 ~g~~T~Im~ASfRn~~qi~~laG~D~l 252 (333)
T PTZ00411 226 HGYKTIVMGASFRNTGEILELAGCDKL 252 (333)
T ss_pred cCCCeEEEecccCCHHHHHHHHCCCEE
Confidence 776 35788888898843
No 23
>cd07922 CarBa CarBa is the A subunit of 2-aminophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. CarBa is the A subunit of 2-aminophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. 2-aminophenol 1,6-dioxygenase is a key enzyme in the carbazole degradation pathway isolated from bacterial strains with carbazole degradation ability. The enzyme is a heterotetramer composed of two A and two B subunits. CarB belongs to the class III extradiol dioxygenase family, composed of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. Although the enzyme was originally isolated as a meta-cleavage enzyme for 2'-aminobiphenyl-2,3-diol involved in carbazole degradation, the enzyme has also shown high specificity for 2,3-dihydroxybiphenyl.
Probab=27.83 E-value=31 Score=25.73 Aligned_cols=30 Identities=27% Similarity=0.578 Sum_probs=21.1
Q ss_pred HHHHhhhChhHHHHHHH-----------HHHHHHHhCCCCC
Q 024615 235 LVEKYAADEDAFFADYA-----------EAHLKLSELGFAE 264 (265)
Q Consensus 235 ~V~~yA~~~~~F~~~F~-----------~Am~Km~~lgv~~ 264 (265)
+-++|..|++.+++.|. .-+.+|..+|+++
T Consensus 19 ~rerF~~DPea~~~~~gLt~eE~~aL~~~D~~~L~~lGvhp 59 (81)
T cd07922 19 LIERFQDDPSAVFEEYGLTPAERAALREGTFGALTSIGVHP 59 (81)
T ss_pred HHHHHHHCHHHHHHHcCCCHHHHHHHHccCHHHHHHcCCCH
Confidence 44667788888887772 3367788888764
No 24
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=26.20 E-value=90 Score=30.08 Aligned_cols=87 Identities=16% Similarity=0.183 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhhCCCCchhHHHHhhhHHHHH--hcCCCCCCCCCCCCCCCCCCCCC--CCCCCCC----ChHHHHHHHHH
Q 024615 76 IAVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQEG--RLPDAKQ----GNDHLRQVFGA 147 (265)
Q Consensus 76 ~~~~~i~~ik~~~~~VS~ADiialaa~~av~--~~gGP~~~v~~GR~D~~~~~~~~--~lP~~~~----~~~~l~~~F~~ 147 (265)
.|+..+..++++ .|.|-=.+.+....|+. .+|-..+..+.||.|.+.-...+ .+|...+ .+.++.+.| +
T Consensus 142 eGi~A~~~L~~~--GI~~n~TlvFS~~QA~aaaeAGa~~ISPfVgRi~dw~~~~~g~~~~~~~~dpGv~~v~~i~~~~-~ 218 (391)
T PRK12309 142 EGIKAAEVLEKE--GIHCNLTLLFGFHQAIACAEAGVTLISPFVGRILDWYKKETGRDSYPGAEDPGVQSVTQIYNYY-K 218 (391)
T ss_pred HHHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEeecchhhhhhhhccCCCccccccchHHHHHHHHHHHH-H
Confidence 355555555543 34444444455444444 35778889999998875432222 1332222 356677788 7
Q ss_pred hcCCC----------hhhhhhhcccccc
Q 024615 148 QMGLS----------DKDIVALSGGHTL 165 (265)
Q Consensus 148 ~~Gl~----------~~elVaL~GaHTi 165 (265)
+.|+. +.++..|+|+|.+
T Consensus 219 ~~~~~T~Im~ASfRn~~~v~~laG~d~~ 246 (391)
T PRK12309 219 KFGYKTEVMGASFRNIGEIIELAGCDLL 246 (391)
T ss_pred hcCCCcEEEecccCCHHHHHHHHCCCee
Confidence 77653 5778888888843
No 25
>PRK05264 transcriptional repressor protein MetJ; Provisional
Probab=25.85 E-value=45 Score=25.55 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=25.7
Q ss_pred ccccCCCChHHHHHH--hhhChhHHHHHHHHHHH
Q 024615 224 KALLDDPVFRPLVEK--YAADEDAFFADYAEAHL 255 (265)
Q Consensus 224 ~~L~~d~~t~~~V~~--yA~~~~~F~~~F~~Am~ 255 (265)
..+++|.+||..|+. .|.|.++..+.|--||.
T Consensus 34 LkiLTdERTRRQvnNLRHATNSELLCEAFLHA~T 67 (105)
T PRK05264 34 LKILTDERTRRQVNNLRHATNSELLCEAFLHAFT 67 (105)
T ss_pred HHHHhhHHHHHHHhhhhhcccHHHHHHHHHHHHc
Confidence 345789999999964 58899998898877774
No 26
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=25.26 E-value=29 Score=26.25 Aligned_cols=31 Identities=19% Similarity=0.401 Sum_probs=20.2
Q ss_pred HHHHHHhhhhhcCCchhhHHHHhhcccCcccccCCCCCCCc
Q 024615 18 KCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFG 58 (265)
Q Consensus 18 ~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dg 58 (265)
+|.++|++++.+....+..||+.+- .|||.|
T Consensus 9 ~A~~~i~~ll~~~~~~~~~LRi~v~----------~gGCsG 39 (92)
T TIGR01911 9 DAYEEFKDFLKENDIDNDVIRIHFA----------GMGCMG 39 (92)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEEe----------CCCccC
Confidence 5667777777654443345888763 378888
No 27
>cd00490 Met_repressor_MetJ Met Repressor, MetJ. MetJ is a bacterial regulatory protein that uses S-adenosylmethionine (SAM) as a corepressor to regulate the production of Methionine. MetJ binds arrays of two to five adjacent copies of an eight base-pair 'metbox' sequence. MetJ forms sufficiently strong interactions with the sugar-phosphate backbone to accomodate sequence variation in natural operators. However, it is very sensitive to particular base changes in the operator. MetJ exists as a homodimer.
Probab=24.86 E-value=48 Score=25.24 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=25.5
Q ss_pred ccccCCCChHHHHHH--hhhChhHHHHHHHHHHH
Q 024615 224 KALLDDPVFRPLVEK--YAADEDAFFADYAEAHL 255 (265)
Q Consensus 224 ~~L~~d~~t~~~V~~--yA~~~~~F~~~F~~Am~ 255 (265)
..+++|.+||..|+. .|.|.++..+.|--||.
T Consensus 33 LkiLTdERTRRQvnnlRHATNSELLCEAFLHAfT 66 (103)
T cd00490 33 LKILTDERTRRQVNNLRHATNSELLCEAFLHAFT 66 (103)
T ss_pred HHHHhhHHHHHHHhhhhhcccHHHHHHHHHHHhc
Confidence 345789999999964 58899988888877764
No 28
>PRK05269 transaldolase B; Provisional
Probab=23.67 E-value=54 Score=30.68 Aligned_cols=86 Identities=15% Similarity=0.115 Sum_probs=47.6
Q ss_pred HHHHHHHHHhhCCCCchhHHHHhhhHHHHH--hcCCCCCCCCCCCCCCCCCCC---CCCCCC---CCCChHHHHHHHHHh
Q 024615 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQ---EGRLPD---AKQGNDHLRQVFGAQ 148 (265)
Q Consensus 77 ~~~~i~~ik~~~~~VS~ADiialaa~~av~--~~gGP~~~v~~GR~D~~~~~~---~~~lP~---~~~~~~~l~~~F~~~ 148 (265)
|+..+..++++ .|.|-=.+.+....|+. .+|-..+..+.||.|...-.. ...-+. +-..+.++.+.| ++
T Consensus 139 Gi~A~~~L~~~--GI~vn~TlvFs~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~-k~ 215 (318)
T PRK05269 139 GIRAAEQLEKE--GINCNLTLLFSFAQARACAEAGVFLISPFVGRILDWYKKNTGKKEYAPAEDPGVVSVTKIYNYY-KK 215 (318)
T ss_pred HHHHHHHHHHc--CCceeEeEecCHHHHHHHHHcCCCEEEeeccHHHHHhhhcccccccCcCCCcHHHHHHHHHHHH-HH
Confidence 55555555543 33433333444433333 357778899999998652211 011111 223466677888 88
Q ss_pred cCCC----------hhhhhhhcccccc
Q 024615 149 MGLS----------DKDIVALSGGHTL 165 (265)
Q Consensus 149 ~Gl~----------~~elVaL~GaHTi 165 (265)
.|+. ..++..|.|+|++
T Consensus 216 ~~~~t~im~ASfrn~~~v~~laG~d~v 242 (318)
T PRK05269 216 HGYKTVVMGASFRNTGQILELAGCDRL 242 (318)
T ss_pred cCCCceEEeeccCCHHHHHHHhCCCeE
Confidence 7764 4566777777754
No 29
>cd00439 Transaldolase Transaldolase. Enzymes found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates.
Probab=22.98 E-value=43 Score=30.13 Aligned_cols=74 Identities=12% Similarity=-0.060 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhhCCCCchhHHHHhhhHHHHH--hcCCCCCCCCCCCCCCCCCCC---CCCCCCCCCC---hHHHHHHHHH
Q 024615 76 IAVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQ---EGRLPDAKQG---NDHLRQVFGA 147 (265)
Q Consensus 76 ~~~~~i~~ik~~~~~VS~ADiialaa~~av~--~~gGP~~~v~~GR~D~~~~~~---~~~lP~~~~~---~~~l~~~F~~ 147 (265)
.|++.+..++++ .|++-=.+.+....|+. .+|-..+.+++||.|...-.. .+.=|..... +.++.+.| +
T Consensus 127 ~Gl~A~~~L~~~--GI~vn~T~vfs~~Qa~~aa~Aga~~ispfvgRid~~~~~~~~~~~~d~~~~~gi~~~~~~~~~~-~ 203 (252)
T cd00439 127 EGIPAIKDLIAA--GISVNVTLIFSIAQYEAVADAGTSVASPFVSRIDTLMDKMLEQIGLDLRGKAGVAQVTLAYKLY-K 203 (252)
T ss_pred HHHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEEeccHHHHHhhhhccccccccccCcHHHHHHHHHHHH-H
Confidence 466777776654 34443344455444443 357778899999998765421 1111111122 33566677 6
Q ss_pred hcCCC
Q 024615 148 QMGLS 152 (265)
Q Consensus 148 ~~Gl~ 152 (265)
..|..
T Consensus 204 ~~~~~ 208 (252)
T cd00439 204 QKFKK 208 (252)
T ss_pred HhCCC
Confidence 66654
No 30
>TIGR00874 talAB transaldolase. This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.
Probab=20.59 E-value=83 Score=29.46 Aligned_cols=85 Identities=15% Similarity=0.158 Sum_probs=47.8
Q ss_pred HHHHHHHHHhhCCCCchhHHHHhhhHHHHH--hcCCCCCCCCCCCCCCCCCCCCC--CC-CC---CCCChHHHHHHHHHh
Q 024615 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQEG--RL-PD---AKQGNDHLRQVFGAQ 148 (265)
Q Consensus 77 ~~~~i~~ik~~~~~VS~ADiialaa~~av~--~~gGP~~~v~~GR~D~~~~~~~~--~l-P~---~~~~~~~l~~~F~~~ 148 (265)
|+..+..++++ .|+|-=.+.+....|+. .+|-..+..+.||.+-+.-...+ .. +. +-..+.++.+.| ++
T Consensus 137 Gi~A~~~L~~~--GI~vN~TliFS~~Qa~aaa~AGa~~ISPFVgRi~dw~~~~~g~~~~~~~~d~Gv~~v~~i~~~~-k~ 213 (317)
T TIGR00874 137 GIRAAEELEKE--GIHCNLTLLFSFVQAIACAEAKVTLISPFVGRILDWYKAATGKKEYSIEEDPGVASVKKIYNYY-KK 213 (317)
T ss_pred HHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEeecchHhHhhhhccCccccccccCchHHHHHHHHHHH-HH
Confidence 55555555543 23332223344333333 35778889999998764321111 11 11 123456677888 88
Q ss_pred cCCC----------hhhhhhhccccc
Q 024615 149 MGLS----------DKDIVALSGGHT 164 (265)
Q Consensus 149 ~Gl~----------~~elVaL~GaHT 164 (265)
.|+. .+|+.+|.|+|.
T Consensus 214 ~g~~T~Im~ASfRn~~qv~~laG~d~ 239 (317)
T TIGR00874 214 HGYPTEVMGASFRNKEEILALAGCDR 239 (317)
T ss_pred cCCCcEEEeeccCCHHHHHHHHCCCe
Confidence 7763 567788888874
Done!