Query 024619
Match_columns 265
No_of_seqs 148 out of 2049
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 11:26:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024619.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024619hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ibj_A CBL, cystathionine beta 100.0 1.7E-35 5.7E-40 265.0 25.9 255 7-261 85-339 (464)
2 3ndn_A O-succinylhomoserine su 100.0 7.2E-36 2.5E-40 263.9 22.4 260 4-263 22-290 (414)
3 3nmy_A Xometc, cystathionine g 100.0 2.2E-35 7.4E-40 259.8 21.8 258 7-264 18-278 (400)
4 3qhx_A Cystathionine gamma-syn 100.0 3.7E-34 1.3E-38 251.5 25.6 256 8-263 17-275 (392)
5 2fq6_A Cystathionine beta-lyas 100.0 6.3E-34 2.2E-38 251.4 23.3 255 8-263 25-292 (415)
6 3cog_A Cystathionine gamma-lya 100.0 1.1E-33 3.6E-38 249.4 24.6 254 8-262 18-275 (403)
7 3ri6_A O-acetylhomoserine sulf 100.0 2.4E-34 8.1E-39 255.1 18.6 256 9-264 27-312 (430)
8 3acz_A Methionine gamma-lyase; 100.0 3.3E-33 1.1E-37 245.2 24.1 257 5-262 2-267 (389)
9 1qgn_A Protein (cystathionine 100.0 9E-33 3.1E-37 245.7 24.6 253 10-263 58-323 (445)
10 1n8p_A Cystathionine gamma-lya 100.0 1.6E-32 5.4E-37 241.2 21.5 252 8-262 7-265 (393)
11 1e5e_A MGL, methionine gamma-l 100.0 2.7E-32 9.1E-37 240.6 21.0 253 9-262 8-272 (404)
12 1cs1_A CGS, protein (cystathio 100.0 8.3E-31 2.8E-35 229.5 26.6 252 9-260 5-258 (386)
13 1gc0_A Methionine gamma-lyase; 100.0 1.9E-31 6.6E-36 234.5 21.5 258 6-263 7-275 (398)
14 2rfv_A Methionine gamma-lyase; 100.0 1.3E-30 4.5E-35 229.1 23.8 251 10-261 10-272 (398)
15 2cb1_A O-acetyl homoserine sul 100.0 1.5E-29 5E-34 223.5 23.2 251 10-261 4-290 (412)
16 2ctz_A O-acetyl-L-homoserine s 100.0 2E-29 6.7E-34 223.4 22.2 254 10-263 4-300 (421)
17 3jzl_A Putative cystathionine 100.0 1.8E-27 6E-32 209.5 20.6 209 55-264 59-294 (409)
18 3i16_A Aluminum resistance pro 100.0 1.4E-27 4.8E-32 210.9 18.7 208 56-264 74-311 (427)
19 1pff_A Methionine gamma-lyase; 100.0 4.6E-28 1.6E-32 207.5 14.9 192 59-251 2-197 (331)
20 3hvy_A Cystathionine beta-lyas 100.0 2.1E-27 7.3E-32 209.8 18.6 215 46-264 68-311 (427)
21 3tqx_A 2-amino-3-ketobutyrate 100.0 5.9E-27 2E-31 205.1 19.0 230 10-248 42-291 (399)
22 3nra_A Aspartate aminotransfer 99.9 2.4E-27 8.2E-32 208.2 16.1 228 12-248 40-299 (407)
23 2w8t_A SPT, serine palmitoyltr 99.9 6.7E-27 2.3E-31 207.3 17.7 225 10-243 63-304 (427)
24 1b5p_A Protein (aspartate amin 99.9 2.3E-26 7.8E-31 201.1 20.4 195 47-247 62-279 (385)
25 3a2b_A Serine palmitoyltransfe 99.9 2E-26 6.9E-31 202.1 17.7 202 10-220 42-259 (398)
26 3dzz_A Putative pyridoxal 5'-p 99.9 4.9E-26 1.7E-30 198.8 20.0 223 10-242 26-276 (391)
27 3kki_A CAI-1 autoinducer synth 99.9 1.3E-26 4.5E-31 204.1 15.7 204 9-221 57-273 (409)
28 2z61_A Probable aspartate amin 99.9 1.4E-25 4.8E-30 194.9 21.9 225 11-249 29-269 (370)
29 1bs0_A Protein (8-amino-7-oxon 99.9 1.2E-25 4E-30 196.3 20.9 228 10-247 38-280 (384)
30 4dq6_A Putative pyridoxal phos 99.9 7.6E-26 2.6E-30 197.6 18.7 221 11-242 32-280 (391)
31 1fc4_A 2-amino-3-ketobutyrate 99.9 7.3E-26 2.5E-30 198.6 17.1 231 9-248 43-293 (401)
32 3kax_A Aminotransferase, class 99.9 2.8E-25 9.7E-30 193.4 20.5 229 11-249 24-279 (383)
33 1o4s_A Aspartate aminotransfer 99.9 5E-25 1.7E-29 192.8 21.7 226 11-248 41-292 (389)
34 1j32_A Aspartate aminotransfer 99.9 3.3E-25 1.1E-29 193.6 19.4 221 11-243 30-278 (388)
35 1gd9_A Aspartate aminotransfer 99.9 5.3E-25 1.8E-29 192.4 19.4 197 47-249 57-280 (389)
36 3jtx_A Aminotransferase; NP_28 99.9 5.1E-25 1.7E-29 192.8 18.3 228 8-247 27-290 (396)
37 3b46_A Aminotransferase BNA3; 99.9 4.6E-25 1.6E-29 196.7 18.1 228 10-247 56-320 (447)
38 3ele_A Amino transferase; RER0 99.9 5.9E-25 2E-29 192.7 18.2 202 11-219 35-266 (398)
39 2x5d_A Probable aminotransfera 99.9 7E-25 2.4E-29 193.3 18.8 227 11-247 37-290 (412)
40 3fdb_A Beta C-S lyase, putativ 99.9 1E-25 3.5E-30 195.9 13.2 228 10-247 22-269 (377)
41 3op7_A Aminotransferase class 99.9 3.3E-25 1.1E-29 192.8 15.5 196 45-248 55-268 (375)
42 3h14_A Aminotransferase, class 99.9 2.4E-24 8.4E-29 188.4 20.9 224 11-248 31-276 (391)
43 3l8a_A METC, putative aminotra 99.9 2.5E-25 8.7E-30 196.7 14.3 224 10-243 60-311 (421)
44 2gb3_A Aspartate aminotransfer 99.9 2.6E-24 8.8E-29 189.5 20.4 225 11-247 43-289 (409)
45 1v2d_A Glutamine aminotransfer 99.9 1.7E-24 5.8E-29 188.7 19.0 188 47-242 55-262 (381)
46 1c7n_A Cystalysin; transferase 99.9 1.3E-24 4.4E-29 190.5 18.4 221 12-243 32-281 (399)
47 3ly1_A Putative histidinol-pho 99.9 7.5E-25 2.6E-29 189.0 16.0 222 10-249 15-258 (354)
48 2o0r_A RV0858C (N-succinyldiam 99.9 3E-24 1E-28 189.1 19.8 188 46-239 55-270 (411)
49 3fvs_A Kynurenine--oxoglutarat 99.9 1.2E-24 4.2E-29 192.0 17.1 225 12-245 29-290 (422)
50 1u08_A Hypothetical aminotrans 99.9 2.1E-24 7.1E-29 188.5 18.2 219 12-242 31-276 (386)
51 3e2y_A Kynurenine-oxoglutarate 99.9 2.3E-24 7.8E-29 189.5 18.5 225 11-245 23-283 (410)
52 2dou_A Probable N-succinyldiam 99.9 4.3E-25 1.5E-29 192.2 13.8 229 11-249 25-277 (376)
53 3dyd_A Tyrosine aminotransfera 99.9 1.2E-24 4.2E-29 192.8 16.9 199 8-217 51-279 (427)
54 1d2f_A MALY protein; aminotran 99.9 3.6E-24 1.2E-28 187.3 19.4 221 12-243 29-277 (390)
55 7aat_A Aspartate aminotransfer 99.9 2.2E-24 7.4E-29 189.3 18.1 198 12-215 29-264 (401)
56 3ezs_A Aminotransferase ASPB; 99.9 1.3E-24 4.4E-29 189.0 16.4 224 12-248 24-277 (376)
57 3ffh_A Histidinol-phosphate am 99.9 7.8E-25 2.7E-29 189.6 14.7 218 12-247 33-268 (363)
58 2r2n_A Kynurenine/alpha-aminoa 99.9 6.7E-24 2.3E-28 187.9 20.9 194 47-247 72-307 (425)
59 1yiz_A Kynurenine aminotransfe 99.9 2.9E-24 9.9E-29 190.2 18.2 222 12-242 38-295 (429)
60 3get_A Histidinol-phosphate am 99.9 3E-25 1E-29 192.4 11.5 222 11-249 30-272 (365)
61 3p1t_A Putative histidinol-pho 99.9 2.8E-24 9.4E-29 184.1 16.5 195 8-220 13-217 (337)
62 4eu1_A Mitochondrial aspartate 99.9 1.8E-23 6.2E-28 184.0 22.1 226 11-245 41-308 (409)
63 2o1b_A Aminotransferase, class 99.9 1.6E-24 5.3E-29 190.7 15.2 227 10-247 46-298 (404)
64 1xi9_A Putative transaminase; 99.9 2.4E-24 8E-29 189.5 15.9 195 47-247 72-295 (406)
65 2dr1_A PH1308 protein, 386AA l 99.9 8E-24 2.7E-28 184.3 19.0 160 55-220 53-226 (386)
66 3aow_A Putative uncharacterize 99.9 1.1E-24 3.7E-29 194.4 13.5 194 47-247 112-333 (448)
67 3ht4_A Aluminum resistance pro 99.9 6E-24 2.1E-28 188.3 17.9 208 55-263 65-299 (431)
68 3ei9_A LL-diaminopimelate amin 99.9 3.1E-24 1.1E-28 190.2 16.0 235 11-248 56-324 (432)
69 1t3i_A Probable cysteine desul 99.9 9.7E-25 3.3E-29 192.2 12.4 163 55-220 72-248 (420)
70 1lc5_A COBD, L-threonine-O-3-p 99.9 7.3E-24 2.5E-28 183.7 17.1 220 11-249 24-262 (364)
71 1fg7_A Histidinol phosphate am 99.9 4E-23 1.4E-27 178.8 21.6 213 12-249 30-259 (356)
72 3lvm_A Cysteine desulfurase; s 99.9 2.6E-24 8.8E-29 189.9 13.5 162 55-220 68-242 (423)
73 3g0t_A Putative aminotransfera 99.9 2E-24 7E-29 191.5 12.8 201 11-221 44-280 (437)
74 3euc_A Histidinol-phosphate am 99.9 8.3E-25 2.8E-29 189.7 9.6 223 11-249 30-271 (367)
75 3hdo_A Histidinol-phosphate am 99.9 1.5E-24 5E-29 187.8 10.7 225 11-248 26-258 (360)
76 3zrp_A Serine-pyruvate aminotr 99.9 2.7E-23 9.2E-28 180.7 18.7 164 55-222 35-209 (384)
77 3t18_A Aminotransferase class 99.9 8.3E-24 2.8E-28 186.4 15.4 230 11-249 37-315 (413)
78 2bwn_A 5-aminolevulinate synth 99.9 2.4E-23 8.3E-28 182.6 18.3 202 10-220 45-264 (401)
79 4f4e_A Aromatic-amino-acid ami 99.9 1.9E-23 6.6E-28 184.6 17.7 196 12-215 50-283 (420)
80 3nyt_A Aminotransferase WBPE; 99.9 2.2E-23 7.6E-28 181.0 17.7 190 54-252 34-247 (367)
81 2zc0_A Alanine glyoxylate tran 99.9 6.4E-24 2.2E-28 186.6 14.4 187 49-242 71-286 (407)
82 1vp4_A Aminotransferase, putat 99.9 4.1E-24 1.4E-28 189.2 13.2 194 47-247 79-304 (425)
83 3rq1_A Aminotransferase class 99.9 2.4E-23 8.1E-28 183.7 17.6 198 46-248 73-315 (418)
84 3cq5_A Histidinol-phosphate am 99.9 2.8E-24 9.7E-29 186.7 11.4 169 47-220 64-250 (369)
85 1bw0_A TAT, protein (tyrosine 99.9 3.9E-23 1.3E-27 182.2 18.1 200 11-218 33-270 (416)
86 2x5f_A Aspartate_tyrosine_phen 99.9 1E-22 3.4E-27 180.4 20.3 225 12-248 48-324 (430)
87 2aeu_A Hypothetical protein MJ 99.9 1.8E-23 6E-28 182.4 15.1 184 56-249 59-253 (374)
88 3tcm_A Alanine aminotransferas 99.9 3.2E-23 1.1E-27 187.3 16.5 179 45-227 126-346 (500)
89 3frk_A QDTB; aminotransferase, 99.9 5.3E-23 1.8E-27 178.8 17.2 165 55-228 36-212 (373)
90 1iay_A ACC synthase 2, 1-amino 99.9 4.7E-22 1.6E-26 176.0 23.5 197 47-249 77-314 (428)
91 3uwc_A Nucleotide-sugar aminot 99.9 1E-22 3.5E-27 176.9 18.6 165 54-227 37-212 (374)
92 3qgu_A LL-diaminopimelate amin 99.9 1E-23 3.4E-28 187.8 12.4 231 10-249 68-337 (449)
93 3ihj_A Alanine aminotransferas 99.9 1.5E-22 5.3E-27 182.7 20.1 180 46-229 122-347 (498)
94 3fsl_A Aromatic-amino-acid ami 99.9 1.2E-22 4.2E-27 177.7 18.9 198 11-215 26-261 (397)
95 3piu_A 1-aminocyclopropane-1-c 99.9 2.8E-22 9.6E-27 177.9 21.1 174 47-225 80-297 (435)
96 1elu_A L-cysteine/L-cystine C- 99.9 8.4E-23 2.9E-27 178.0 17.2 164 55-220 59-238 (390)
97 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.7E-23 6E-28 181.3 12.8 159 55-220 53-227 (371)
98 3meb_A Aspartate aminotransfer 99.9 1.6E-22 5.6E-27 180.2 19.4 230 12-246 50-336 (448)
99 1kmj_A Selenocysteine lyase; p 99.9 6.7E-23 2.3E-27 179.5 16.3 163 55-220 67-243 (406)
100 3isl_A Purine catabolism prote 99.9 3.4E-23 1.2E-27 182.1 14.3 162 55-220 44-216 (416)
101 4hvk_A Probable cysteine desul 99.9 9.1E-24 3.1E-28 183.3 9.9 159 55-218 43-214 (382)
102 1yaa_A Aspartate aminotransfer 99.9 2E-22 6.8E-27 177.5 18.5 196 11-214 29-267 (412)
103 2oga_A Transaminase; PLP-depen 99.9 2.2E-22 7.7E-27 176.6 18.7 187 55-250 63-273 (399)
104 3ftb_A Histidinol-phosphate am 99.9 2.4E-22 8.4E-27 173.6 18.6 221 9-249 24-261 (361)
105 1eg5_A Aminotransferase; PLP-d 99.9 2.2E-22 7.4E-27 175.0 18.1 160 56-219 45-219 (384)
106 1vjo_A Alanine--glyoxylate ami 99.9 4.9E-23 1.7E-27 180.1 13.6 160 55-220 67-239 (393)
107 4eb5_A Probable cysteine desul 99.9 2E-23 6.8E-28 181.5 11.0 159 55-218 43-214 (382)
108 3ppl_A Aspartate aminotransfer 99.9 9.1E-23 3.1E-27 180.6 14.9 193 46-248 71-305 (427)
109 2z9v_A Aspartate aminotransfer 99.9 1.1E-22 3.9E-27 177.5 15.0 161 56-220 43-214 (392)
110 1jg8_A L-ALLO-threonine aldola 99.9 1.1E-22 3.7E-27 175.0 14.6 197 11-220 3-220 (347)
111 3ju7_A Putative PLP-dependent 99.9 1.7E-22 5.8E-27 176.3 15.7 197 55-262 36-262 (377)
112 1b9h_A AHBA synthase, protein 99.9 2.4E-22 8.1E-27 175.6 16.7 156 54-220 37-205 (388)
113 3cai_A Possible aminotransfera 99.9 1.4E-22 4.9E-27 177.8 15.3 161 55-219 69-243 (406)
114 1iug_A Putative aspartate amin 99.9 2.7E-22 9.4E-27 172.4 16.7 158 56-220 35-203 (352)
115 3lws_A Aromatic amino acid bet 99.9 3.7E-23 1.3E-27 178.6 11.3 204 16-229 9-231 (357)
116 2q7w_A Aspartate aminotransfer 99.9 2.7E-22 9.2E-27 175.5 16.6 197 11-215 26-260 (396)
117 3k7y_A Aspartate aminotransfer 99.9 7.6E-22 2.6E-26 173.6 18.6 165 45-215 64-263 (405)
118 3fkd_A L-threonine-O-3-phospha 99.9 9.8E-23 3.4E-27 175.6 12.6 215 10-245 14-238 (350)
119 3vax_A Putative uncharacterize 99.9 1.3E-22 4.6E-27 177.5 13.6 158 55-217 63-235 (400)
120 3nnk_A Ureidoglycine-glyoxylat 99.9 2E-22 6.7E-27 177.0 14.3 162 55-220 46-218 (411)
121 4adb_A Succinylornithine trans 99.9 2.8E-22 9.7E-27 175.9 15.3 227 10-247 38-296 (406)
122 3dr4_A Putative perosamine syn 99.9 1.1E-21 3.8E-26 171.5 18.9 165 54-228 55-231 (391)
123 2huf_A Alanine glyoxylate amin 99.9 2.3E-22 7.8E-27 175.7 14.1 162 55-220 52-224 (393)
124 3asa_A LL-diaminopimelate amin 99.9 2.1E-22 7.3E-27 176.8 13.8 199 11-219 33-254 (400)
125 3nx3_A Acoat, acetylornithine 99.9 3.6E-22 1.2E-26 174.9 15.2 231 10-248 35-294 (395)
126 2ch1_A 3-hydroxykynurenine tra 99.9 2.1E-22 7.4E-27 176.0 13.5 161 56-220 52-223 (396)
127 2zyj_A Alpha-aminodipate amino 99.9 2.5E-22 8.6E-27 176.0 13.5 193 47-248 68-283 (397)
128 3f9t_A TDC, L-tyrosine decarbo 99.9 1.5E-22 5.3E-27 176.4 12.0 161 56-222 70-266 (397)
129 3d6k_A Putative aminotransfera 99.9 3.7E-22 1.3E-26 176.5 14.6 194 46-249 69-304 (422)
130 3b1d_A Betac-S lyase; HET: PLP 99.8 2.1E-24 7.2E-29 189.0 0.0 206 12-227 32-264 (392)
131 3f6t_A Aspartate aminotransfer 99.9 5.1E-22 1.7E-26 180.7 15.6 161 53-218 139-330 (533)
132 2c81_A Glutamine-2-deoxy-scyll 99.9 2.5E-21 8.5E-26 170.9 19.5 169 49-227 34-216 (418)
133 3ruy_A Ornithine aminotransfer 99.9 1.4E-22 4.7E-27 177.3 11.1 230 10-248 35-297 (392)
134 3ez1_A Aminotransferase MOCR f 99.9 3.6E-22 1.2E-26 176.4 13.3 187 47-243 63-293 (423)
135 1ajs_A Aspartate aminotransfer 99.9 1.1E-21 3.6E-26 172.7 16.1 198 11-215 30-272 (412)
136 2eh6_A Acoat, acetylornithine 99.9 2.9E-22 9.8E-27 174.1 11.9 190 55-249 70-287 (375)
137 3f0h_A Aminotransferase; RER07 99.9 8.2E-22 2.8E-26 171.2 14.7 162 55-220 52-224 (376)
138 3kgw_A Alanine-glyoxylate amin 99.9 4.8E-22 1.6E-26 173.3 13.0 162 55-220 56-228 (393)
139 3if2_A Aminotransferase; YP_26 99.9 2.9E-21 1E-25 171.6 18.2 192 47-241 77-314 (444)
140 2bkw_A Alanine-glyoxylate amin 99.9 2.6E-21 8.8E-26 168.3 17.2 161 56-221 39-220 (385)
141 2ord_A Acoat, acetylornithine 99.9 1.6E-22 5.5E-27 177.2 9.4 199 10-220 39-270 (397)
142 1mdo_A ARNB aminotransferase; 99.9 2.2E-21 7.4E-26 169.6 16.2 161 55-225 39-210 (393)
143 2fnu_A Aminotransferase; prote 99.9 6.5E-21 2.2E-25 165.3 19.1 162 55-226 32-206 (375)
144 3bwn_A AT1G70560, L-tryptophan 99.9 3.6E-22 1.2E-26 175.0 11.1 186 45-242 55-258 (391)
145 3g7q_A Valine-pyruvate aminotr 99.9 3E-21 1E-25 169.9 17.0 191 47-242 69-289 (417)
146 1qz9_A Kynureninase; kynurenin 99.9 8.1E-22 2.8E-26 173.5 13.0 163 55-220 71-246 (416)
147 2ay1_A Aroat, aromatic amino a 99.9 7.6E-22 2.6E-26 172.6 12.2 197 11-215 26-257 (394)
148 2po3_A 4-dehydrase; external a 99.9 1.7E-20 5.8E-25 165.9 20.1 163 55-227 52-224 (424)
149 2yrr_A Aminotransferase, class 99.9 1.3E-21 4.4E-26 168.1 12.3 159 56-220 34-204 (353)
150 2pb2_A Acetylornithine/succiny 99.9 1.5E-21 5E-26 172.7 12.9 228 10-248 56-315 (420)
151 1vef_A Acetylornithine/acetyl- 99.9 8.8E-22 3E-26 172.3 10.9 197 11-219 45-271 (395)
152 3a9z_A Selenocysteine lyase; P 99.9 3.6E-22 1.2E-26 176.8 8.2 160 56-219 62-262 (432)
153 1uu1_A Histidinol-phosphate am 99.9 9.2E-22 3.1E-26 168.7 9.3 212 12-248 20-246 (335)
154 1o69_A Aminotransferase; struc 99.9 3.3E-20 1.1E-24 162.6 19.0 162 55-226 32-207 (394)
155 1m32_A 2-aminoethylphosphonate 99.9 3.6E-21 1.2E-25 166.1 12.7 161 55-220 37-211 (366)
156 3mad_A Sphingosine-1-phosphate 99.9 8.1E-21 2.8E-25 172.1 15.1 160 56-221 140-331 (514)
157 3ffr_A Phosphoserine aminotran 99.9 1.3E-20 4.4E-25 162.5 15.6 158 55-221 43-210 (362)
158 3e9k_A Kynureninase; kynurenin 99.8 6.3E-21 2.2E-25 170.6 12.9 164 55-220 111-295 (465)
159 1svv_A Threonine aldolase; str 99.8 2.7E-20 9.3E-25 160.3 16.0 193 12-220 14-233 (359)
160 2zy4_A L-aspartate beta-decarb 99.8 2.3E-20 7.8E-25 170.1 16.1 169 47-218 132-332 (546)
161 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 5.7E-20 2E-24 163.2 18.1 161 55-223 62-240 (437)
162 1v72_A Aldolase; PLP-dependent 99.8 6.3E-20 2.1E-24 157.9 16.6 167 54-227 42-235 (356)
163 1z7d_A Ornithine aminotransfer 99.8 1.4E-20 5E-25 167.0 12.9 226 10-248 64-327 (433)
164 3pj0_A LMO0305 protein; struct 99.8 3.2E-20 1.1E-24 160.2 14.0 168 55-228 48-232 (359)
165 2oat_A Ornithine aminotransfer 99.8 3.2E-20 1.1E-24 165.0 14.1 229 10-248 75-338 (439)
166 2dkj_A Serine hydroxymethyltra 99.8 2.4E-20 8.2E-25 163.6 13.1 160 61-227 75-250 (407)
167 2ez2_A Beta-tyrosinase, tyrosi 99.8 1.1E-19 3.8E-24 162.0 17.6 164 54-226 74-280 (456)
168 3n0l_A Serine hydroxymethyltra 99.8 9.2E-20 3.1E-24 160.3 16.4 166 57-228 73-252 (417)
169 1c4k_A Protein (ornithine deca 99.8 2.5E-19 8.5E-24 167.4 19.0 159 55-219 173-372 (730)
170 3b8x_A WBDK, pyridoxamine 5-ph 99.8 3.5E-19 1.2E-23 155.6 18.8 161 54-224 33-211 (390)
171 3dxv_A Alpha-amino-epsilon-cap 99.8 3.3E-20 1.1E-24 164.7 11.8 201 9-220 41-288 (439)
172 1wyu_B Glycine dehydrogenase s 99.8 5E-20 1.7E-24 165.3 12.9 160 56-220 108-289 (474)
173 3mc6_A Sphingosine-1-phosphate 99.8 2.5E-20 8.6E-25 168.1 10.4 160 56-221 108-299 (497)
174 2x3l_A ORN/Lys/Arg decarboxyla 99.8 1.2E-19 4.2E-24 161.6 14.3 156 54-220 56-229 (446)
175 3ecd_A Serine hydroxymethyltra 99.8 6E-19 2.1E-23 155.4 17.4 165 56-226 78-258 (425)
176 3ke3_A Putative serine-pyruvat 99.8 3E-19 1E-23 155.7 14.9 160 56-220 36-217 (379)
177 2hox_A ALLIIN lyase 1; cystein 99.8 6.3E-20 2.2E-24 162.6 10.5 182 48-242 91-292 (427)
178 2vi8_A Serine hydroxymethyltra 99.8 1.6E-19 5.5E-24 158.2 12.5 159 60-225 74-247 (405)
179 3gbx_A Serine hydroxymethyltra 99.8 2.3E-19 7.8E-24 157.9 13.1 154 57-217 78-246 (420)
180 2eo5_A 419AA long hypothetical 99.8 8E-19 2.7E-23 155.0 16.3 226 11-248 42-325 (419)
181 2dgk_A GAD-beta, GADB, glutama 99.8 6.9E-19 2.4E-23 156.9 15.3 157 56-219 82-279 (452)
182 3vp6_A Glutamate decarboxylase 99.8 3.9E-19 1.3E-23 160.9 13.6 169 46-220 124-334 (511)
183 1sff_A 4-aminobutyrate aminotr 99.8 1.4E-19 4.7E-24 159.8 10.1 201 10-220 40-286 (426)
184 2cy8_A D-phgat, D-phenylglycin 99.8 3.6E-19 1.2E-23 158.7 12.8 199 10-220 56-287 (453)
185 2z67_A O-phosphoseryl-tRNA(SEC 99.8 2.1E-19 7.3E-24 160.4 11.3 161 56-222 134-318 (456)
186 3h7f_A Serine hydroxymethyltra 99.8 9.1E-19 3.1E-23 156.0 14.9 156 58-220 93-265 (447)
187 2vyc_A Biodegradative arginine 99.8 1.3E-18 4.4E-23 163.7 16.3 156 55-218 205-402 (755)
188 3n5m_A Adenosylmethionine-8-am 99.8 6.2E-19 2.1E-23 157.1 12.9 201 10-220 48-303 (452)
189 3a8u_X Omega-amino acid--pyruv 99.8 1.6E-18 5.6E-23 154.2 15.4 203 10-219 49-306 (449)
190 3i4j_A Aminotransferase, class 99.8 3.2E-19 1.1E-23 157.9 10.5 229 10-248 28-311 (430)
191 3n75_A LDC, lysine decarboxyla 99.8 1.9E-18 6.6E-23 160.4 16.0 155 55-218 195-383 (715)
192 1s0a_A Adenosylmethionine-8-am 99.8 1.7E-18 5.9E-23 153.1 14.7 203 11-220 43-293 (429)
193 4h51_A Aspartate aminotransfer 99.8 1.6E-18 5.3E-23 152.9 14.1 201 13-221 46-285 (420)
194 2epj_A Glutamate-1-semialdehyd 99.8 4.9E-19 1.7E-23 157.0 10.8 201 10-220 55-289 (434)
195 3l44_A Glutamate-1-semialdehyd 99.8 2.5E-19 8.4E-24 158.8 8.8 199 9-220 53-288 (434)
196 3fq8_A Glutamate-1-semialdehyd 99.8 5.8E-19 2E-23 156.1 10.9 201 10-220 51-285 (427)
197 4a6r_A Omega transaminase; tra 99.8 1.4E-18 4.9E-23 155.2 13.0 231 10-248 49-337 (459)
198 2a7v_A Serine hydroxymethyltra 99.8 2.3E-18 7.7E-23 154.5 14.0 154 59-218 104-281 (490)
199 1rv3_A Serine hydroxymethyltra 99.8 1E-18 3.5E-23 157.1 11.6 156 57-218 92-271 (483)
200 3gju_A Putative aminotransfera 99.8 1.7E-18 5.8E-23 154.8 12.6 205 9-220 49-309 (460)
201 1ax4_A Tryptophanase; tryptoph 99.8 6E-18 2.1E-22 151.1 16.1 168 48-224 71-288 (467)
202 2jis_A Cysteine sulfinic acid 99.8 1.4E-18 4.9E-23 157.4 12.1 156 57-218 150-343 (515)
203 3dod_A Adenosylmethionine-8-am 99.8 1E-18 3.4E-23 155.7 10.3 203 9-220 42-299 (448)
204 3hbx_A GAD 1, glutamate decarb 99.8 5.7E-18 1.9E-22 153.0 15.1 157 57-219 97-294 (502)
205 2okj_A Glutamate decarboxylase 99.8 2.6E-18 8.9E-23 155.3 12.5 160 57-220 134-331 (504)
206 1zod_A DGD, 2,2-dialkylglycine 99.8 4.4E-18 1.5E-22 150.7 12.9 202 10-220 42-290 (433)
207 3i5t_A Aminotransferase; pyrid 99.8 9.4E-18 3.2E-22 150.6 14.5 231 9-248 52-344 (476)
208 3k28_A Glutamate-1-semialdehyd 99.8 8.6E-19 3E-23 155.2 7.5 199 9-220 51-286 (429)
209 1js3_A DDC;, DOPA decarboxylas 99.8 3.2E-18 1.1E-22 153.9 11.1 158 57-220 115-321 (486)
210 2qma_A Diaminobutyrate-pyruvat 99.8 1.4E-18 4.9E-23 156.7 8.6 203 13-220 95-343 (497)
211 3tfu_A Adenosylmethionine-8-am 99.7 4.6E-18 1.6E-22 151.9 10.9 203 12-220 76-322 (457)
212 2e7u_A Glutamate-1-semialdehyd 99.7 6.5E-18 2.2E-22 149.3 11.6 200 10-220 51-284 (424)
213 2c0r_A PSAT, phosphoserine ami 99.7 2E-18 6.8E-23 149.3 7.9 150 56-220 50-214 (362)
214 3oks_A 4-aminobutyrate transam 99.7 1.3E-17 4.3E-22 148.8 13.2 232 9-248 59-341 (451)
215 3hmu_A Aminotransferase, class 99.7 1.1E-17 3.8E-22 150.0 12.9 232 9-248 53-340 (472)
216 4e77_A Glutamate-1-semialdehyd 99.7 5.5E-18 1.9E-22 150.0 10.7 202 9-220 51-286 (429)
217 4ffc_A 4-aminobutyrate aminotr 99.7 1.6E-17 5.3E-22 148.3 12.0 232 9-248 62-339 (453)
218 1wyu_A Glycine dehydrogenase ( 99.7 2.8E-17 9.4E-22 146.0 12.3 157 56-220 109-279 (438)
219 1w23_A Phosphoserine aminotran 99.7 4E-18 1.4E-22 147.0 6.6 150 56-220 49-213 (360)
220 3k40_A Aromatic-L-amino-acid d 99.7 1E-17 3.6E-22 150.2 8.6 158 57-220 115-320 (475)
221 4e1o_A HDC, histidine decarbox 99.7 4.9E-17 1.7E-21 146.1 12.5 170 45-220 106-327 (481)
222 2yky_A Beta-transaminase; tran 99.5 7.7E-19 2.6E-23 156.6 0.0 201 9-221 98-319 (465)
223 2cjg_A L-lysine-epsilon aminot 99.7 9.9E-17 3.4E-21 142.9 12.1 198 10-220 53-314 (449)
224 2oqx_A Tryptophanase; lyase, p 99.7 3.3E-16 1.1E-20 139.8 14.2 162 48-218 69-281 (467)
225 2fyf_A PSAT, phosphoserine ami 99.7 1.5E-16 5.2E-21 139.3 10.5 156 56-221 79-241 (398)
226 1ohv_A 4-aminobutyrate aminotr 99.6 5.7E-16 1.9E-20 138.8 3.9 191 9-202 61-331 (472)
227 3e77_A Phosphoserine aminotran 99.6 6.9E-15 2.4E-19 127.7 10.0 153 56-219 59-223 (377)
228 3bc8_A O-phosphoseryl-tRNA(SEC 99.6 1.2E-14 4.2E-19 127.9 10.1 160 57-222 100-286 (450)
229 3qm2_A Phosphoserine aminotran 99.6 6.6E-15 2.3E-19 128.3 8.4 153 55-219 72-238 (386)
230 3hl2_A O-phosphoseryl-tRNA(SEC 99.5 3E-14 1E-18 124.5 9.2 154 62-222 124-304 (501)
231 4ao9_A Beta-phenylalanine amin 99.5 2.9E-13 9.8E-18 120.1 10.6 202 8-220 84-305 (454)
232 3m5u_A Phosphoserine aminotran 99.4 3.4E-13 1.2E-17 116.5 8.1 148 56-220 51-211 (361)
233 3ou5_A Serine hydroxymethyltra 99.4 4.3E-12 1.5E-16 110.6 12.1 151 62-218 107-281 (490)
234 4atq_A 4-aminobutyrate transam 99.2 2.8E-10 9.6E-15 101.1 14.0 233 9-249 62-341 (456)
235 4e3q_A Pyruvate transaminase; 99.1 1.8E-09 6.3E-14 96.3 15.4 205 8-220 64-324 (473)
236 4a0g_A Adenosylmethionine-8-am 99.0 2.7E-10 9.1E-15 108.2 7.8 202 12-219 381-682 (831)
237 3ic5_A Putative saccharopine d 88.7 2 6.8E-05 29.2 7.4 90 72-173 7-97 (118)
238 2al1_A Enolase 1, 2-phospho-D- 81.7 3.1 0.00011 36.3 6.6 93 81-174 277-371 (436)
239 3qtp_A Enolase 1; glycolysis, 80.0 3.4 0.00012 36.0 6.1 94 80-174 282-378 (441)
240 3ruf_A WBGU; rossmann fold, UD 79.6 13 0.00044 30.6 9.7 98 72-170 26-143 (351)
241 3dhn_A NAD-dependent epimerase 78.6 13 0.00046 28.3 9.0 91 73-170 6-104 (227)
242 1tks_A 3,4-dihydroxy-2-butanon 78.1 3.9 0.00013 31.5 5.3 43 132-174 152-194 (204)
243 2jl1_A Triphenylmethane reduct 77.8 7 0.00024 31.2 7.3 90 74-170 3-99 (287)
244 2akz_A Gamma enolase, neural; 76.3 4.7 0.00016 35.2 6.0 93 81-174 274-368 (439)
245 3tqp_A Enolase; energy metabol 76.0 7.6 0.00026 33.7 7.3 92 81-174 267-363 (428)
246 1qyd_A Pinoresinol-lariciresin 75.6 12 0.00042 30.1 8.3 96 74-171 7-110 (313)
247 2fym_A Enolase; RNA degradosom 75.5 14 0.00048 32.0 8.9 94 81-176 271-369 (431)
248 3uj2_A Enolase 1; enzyme funct 75.0 8 0.00027 33.8 7.1 92 81-174 293-389 (449)
249 3qvo_A NMRA family protein; st 74.9 15 0.00052 28.4 8.4 91 72-170 24-117 (236)
250 2zcu_A Uncharacterized oxidore 73.9 6.7 0.00023 31.3 6.2 90 74-170 2-96 (286)
251 3e48_A Putative nucleoside-dip 73.6 7.4 0.00025 31.1 6.4 90 74-170 3-98 (289)
252 3dqp_A Oxidoreductase YLBE; al 73.5 21 0.00073 27.0 8.8 89 74-170 3-98 (219)
253 3i6i_A Putative leucoanthocyan 72.2 5.4 0.00018 33.1 5.3 98 73-174 12-116 (346)
254 2g1u_A Hypothetical protein TM 72.0 24 0.00084 25.2 9.2 90 71-170 20-111 (155)
255 3otr_A Enolase; structural gen 69.4 4.4 0.00015 35.3 4.1 94 80-175 284-382 (452)
256 1pjq_A CYSG, siroheme synthase 67.6 10 0.00034 33.2 6.2 93 72-178 14-107 (457)
257 2q5c_A NTRC family transcripti 67.1 39 0.0013 25.6 9.1 128 55-197 14-149 (196)
258 1xgk_A Nitrogen metabolite rep 66.9 26 0.00088 29.2 8.4 93 73-169 7-103 (352)
259 1iuk_A Hypothetical protein TT 66.8 9.6 0.00033 27.3 5.0 106 62-178 4-126 (140)
260 1w6t_A Enolase; bacterial infe 66.0 15 0.0005 32.0 6.9 93 81-175 283-380 (444)
261 2pa6_A Enolase; glycolysis, ly 66.0 16 0.00055 31.6 7.1 92 81-174 271-365 (427)
262 3enk_A UDP-glucose 4-epimerase 66.0 16 0.00055 29.9 6.9 98 73-170 7-121 (341)
263 3sxp_A ADP-L-glycero-D-mannohe 65.8 38 0.0013 27.9 9.3 97 73-173 12-134 (362)
264 2ptz_A Enolase; lyase, glycoly 65.3 8.8 0.0003 33.3 5.3 90 85-175 280-373 (432)
265 2r6j_A Eugenol synthase 1; phe 64.7 16 0.00055 29.6 6.7 93 73-171 13-109 (318)
266 2d59_A Hypothetical protein PH 64.6 31 0.0011 24.6 7.4 105 63-178 14-133 (144)
267 3m2p_A UDP-N-acetylglucosamine 64.4 27 0.00091 28.2 7.9 89 73-171 4-102 (311)
268 3llv_A Exopolyphosphatase-rela 63.8 11 0.00039 26.4 5.0 89 71-169 7-95 (141)
269 3rih_A Short chain dehydrogena 62.4 51 0.0017 26.5 9.2 76 72-147 42-127 (293)
270 2ioj_A Hypothetical protein AF 62.0 26 0.0009 24.8 6.6 49 121-175 55-104 (139)
271 3mio_A DHBP synthase, 3,4-dihy 61.9 18 0.00061 27.9 5.8 38 137-174 156-194 (206)
272 1zk4_A R-specific alcohol dehy 61.7 30 0.001 26.8 7.5 76 72-147 7-90 (251)
273 3qn3_A Enolase; structural gen 61.7 7.2 0.00025 33.8 4.0 94 80-175 264-362 (417)
274 2q1w_A Putative nucleotide sug 61.7 32 0.0011 28.0 8.0 94 73-170 23-129 (333)
275 1y81_A Conserved hypothetical 61.3 30 0.001 24.6 6.7 100 68-178 12-125 (138)
276 3keo_A Redox-sensing transcrip 61.1 13 0.00046 28.8 5.1 113 50-177 60-180 (212)
277 2orv_A Thymidine kinase; TP4A 61.0 16 0.00054 28.9 5.5 91 81-178 35-125 (234)
278 3fwz_A Inner membrane protein 60.6 10 0.00035 26.8 4.2 87 72-168 9-95 (140)
279 1kyq_A Met8P, siroheme biosynt 60.4 12 0.0004 30.4 4.8 33 72-104 15-47 (274)
280 2poz_A Putative dehydratase; o 59.6 34 0.0012 29.0 7.9 114 59-175 187-307 (392)
281 2hmt_A YUAA protein; RCK, KTN, 59.6 33 0.0011 23.6 6.8 90 72-170 8-97 (144)
282 1g57_A DHBP synthase, 3,4-dihy 59.3 22 0.00074 27.7 5.9 36 138-174 166-201 (217)
283 2q1s_A Putative nucleotide sug 59.0 36 0.0012 28.3 8.0 94 73-170 34-143 (377)
284 3r6d_A NAD-dependent epimerase 58.5 18 0.00062 27.5 5.6 89 73-170 7-100 (221)
285 3bzy_B ESCU; auto cleavage pro 58.2 6.5 0.00022 25.6 2.4 21 158-178 29-49 (83)
286 2gl5_A Putative dehydratase pr 58.1 30 0.001 29.6 7.3 114 59-175 206-326 (410)
287 4gqr_A Pancreatic alpha-amylas 57.9 6.9 0.00023 34.1 3.3 83 91-178 7-99 (496)
288 4id9_A Short-chain dehydrogena 57.7 36 0.0012 27.8 7.6 86 73-170 21-118 (347)
289 1xg5_A ARPG836; short chain de 57.1 38 0.0013 26.8 7.5 75 72-147 33-119 (279)
290 4egb_A DTDP-glucose 4,6-dehydr 57.1 18 0.00062 29.6 5.7 98 73-170 26-141 (346)
291 1snn_A DHBP synthase, 3,4-dihy 57.0 18 0.00061 28.4 5.1 42 132-174 171-212 (227)
292 4b79_A PA4098, probable short- 56.8 57 0.0019 25.7 8.2 61 72-137 12-74 (242)
293 3rft_A Uronate dehydrogenase; 56.7 56 0.0019 25.6 8.4 89 73-170 5-103 (267)
294 3ged_A Short-chain dehydrogena 56.1 46 0.0016 26.3 7.7 62 72-137 3-67 (247)
295 4g81_D Putative hexonate dehyd 56.0 28 0.00095 27.7 6.4 69 68-137 5-78 (255)
296 2gdq_A YITF; mandelate racemas 55.6 68 0.0023 27.0 9.2 114 59-175 172-293 (382)
297 1ff9_A Saccharopine reductase; 55.6 39 0.0014 29.3 7.8 97 72-173 5-120 (450)
298 1qyc_A Phenylcoumaran benzylic 55.4 24 0.00081 28.3 6.0 93 74-171 7-107 (308)
299 2c20_A UDP-glucose 4-epimerase 55.1 34 0.0012 27.7 7.0 92 74-170 4-110 (330)
300 3slg_A PBGP3 protein; structur 55.1 17 0.00057 30.3 5.2 97 73-174 26-138 (372)
301 3l77_A Short-chain alcohol deh 54.9 45 0.0015 25.5 7.4 76 73-148 4-89 (235)
302 2yxb_A Coenzyme B12-dependent 54.4 24 0.00081 25.9 5.3 66 102-169 30-97 (161)
303 2pju_A Propionate catabolism o 54.3 29 0.001 27.1 6.1 40 128-174 120-159 (225)
304 1hdo_A Biliverdin IX beta redu 54.0 39 0.0013 24.9 6.8 92 73-170 5-103 (206)
305 3s5o_A 4-hydroxy-2-oxoglutarat 53.9 75 0.0026 25.9 8.8 36 140-176 143-178 (307)
306 1lss_A TRK system potassium up 53.7 25 0.00085 24.2 5.3 89 72-169 6-94 (140)
307 3jva_A Dipeptide epimerase; en 53.6 73 0.0025 26.5 8.9 84 93-178 209-294 (354)
308 2duw_A Putative COA-binding pr 53.4 24 0.00083 25.3 5.2 105 64-179 6-127 (145)
309 2pzm_A Putative nucleotide sug 53.4 51 0.0018 26.7 7.9 95 73-170 22-128 (330)
310 3rwb_A TPLDH, pyridoxal 4-dehy 52.9 50 0.0017 25.6 7.4 79 72-152 7-93 (247)
311 3c1o_A Eugenol synthase; pheny 52.8 26 0.0009 28.3 6.0 93 74-171 7-107 (321)
312 3ecs_A Translation initiation 52.8 96 0.0033 25.5 10.2 98 72-175 123-229 (315)
313 3m1a_A Putative dehydrogenase; 52.3 69 0.0024 25.2 8.3 74 72-147 6-87 (281)
314 3c85_A Putative glutathione-re 52.0 31 0.001 25.4 5.8 88 72-169 41-130 (183)
315 3dii_A Short-chain dehydrogena 51.9 41 0.0014 26.1 6.8 73 72-147 3-83 (247)
316 2vt1_B Surface presentation of 51.4 9.6 0.00033 25.4 2.4 21 158-178 29-49 (93)
317 1y80_A Predicted cobalamin bin 51.3 39 0.0013 25.8 6.4 74 102-177 100-179 (210)
318 3bjs_A Mandelate racemase/muco 51.3 65 0.0022 27.7 8.4 115 59-175 217-338 (428)
319 3dr5_A Putative O-methyltransf 51.1 80 0.0027 24.1 11.6 123 54-183 38-170 (221)
320 1g94_A Alpha-amylase; beta-alp 50.5 9.8 0.00034 33.0 3.0 30 149-178 58-87 (448)
321 1id1_A Putative potassium chan 50.3 63 0.0022 22.8 7.1 91 72-168 5-95 (153)
322 3r0u_A Enzyme of enolase super 50.2 81 0.0028 26.6 8.7 82 94-177 215-298 (379)
323 1sjd_A N-acylamino acid racema 50.1 38 0.0013 28.4 6.6 46 128-175 244-290 (368)
324 3q45_A Mandelate racemase/muco 50.0 52 0.0018 27.6 7.4 113 62-177 175-294 (368)
325 1gy8_A UDP-galactose 4-epimera 49.9 47 0.0016 27.7 7.3 98 73-170 4-136 (397)
326 1uls_A Putative 3-oxoacyl-acyl 49.7 30 0.001 26.9 5.6 71 72-146 6-84 (245)
327 3r1i_A Short-chain type dehydr 49.5 56 0.0019 25.9 7.3 76 72-147 33-117 (276)
328 2gas_A Isoflavone reductase; N 49.5 26 0.00087 28.1 5.3 93 74-171 5-106 (307)
329 3pk0_A Short-chain dehydrogena 49.3 48 0.0017 26.0 6.9 76 72-147 11-96 (262)
330 1r6d_A TDP-glucose-4,6-dehydra 49.2 82 0.0028 25.4 8.5 96 74-170 3-119 (337)
331 3t7y_A YOP proteins translocat 49.1 9.2 0.00031 25.7 2.0 21 158-178 44-64 (97)
332 2x4g_A Nucleoside-diphosphate- 49.1 51 0.0017 26.7 7.2 92 73-170 15-118 (342)
333 3is3_A 17BETA-hydroxysteroid d 48.9 25 0.00087 27.8 5.1 66 72-137 19-88 (270)
334 3dfz_A SIRC, precorrin-2 dehyd 48.8 61 0.0021 25.2 7.1 90 72-176 33-123 (223)
335 3efb_A Probable SOR-operon reg 48.7 65 0.0022 25.7 7.5 20 58-77 14-33 (266)
336 3kts_A Glycerol uptake operon 48.6 30 0.001 26.3 5.1 67 126-197 16-89 (192)
337 3mwd_B ATP-citrate synthase; A 48.5 30 0.001 28.8 5.6 74 100-177 64-139 (334)
338 3e2i_A Thymidine kinase; Zn-bi 48.5 30 0.001 27.0 5.1 92 82-177 45-136 (219)
339 4hnl_A Mandelate racemase/muco 48.4 36 0.0012 29.3 6.3 112 62-175 212-329 (421)
340 1tzz_A Hypothetical protein L1 48.2 68 0.0023 27.1 8.0 114 59-175 198-325 (392)
341 2z1n_A Dehydrogenase; reductas 48.2 51 0.0017 25.8 6.8 66 72-137 8-78 (260)
342 3l4b_C TRKA K+ channel protien 48.1 29 0.00099 26.5 5.2 72 73-148 3-74 (218)
343 2q5c_A NTRC family transcripti 48.1 25 0.00085 26.7 4.7 41 127-174 107-147 (196)
344 3osu_A 3-oxoacyl-[acyl-carrier 48.1 29 0.001 27.0 5.3 76 72-147 5-90 (246)
345 2oz8_A MLL7089 protein; struct 47.9 64 0.0022 27.3 7.8 110 59-175 178-296 (389)
346 3c01_E Surface presentation of 47.7 10 0.00034 25.6 2.0 21 158-178 29-49 (98)
347 4iin_A 3-ketoacyl-acyl carrier 47.7 37 0.0013 26.8 6.0 77 72-148 30-116 (271)
348 4e6p_A Probable sorbitol dehyd 47.6 54 0.0019 25.6 6.9 75 72-148 9-91 (259)
349 1xx6_A Thymidine kinase; NESG, 47.6 35 0.0012 25.8 5.5 91 81-175 24-114 (191)
350 2b4q_A Rhamnolipids biosynthes 47.5 30 0.001 27.6 5.4 74 72-146 30-112 (276)
351 2ps2_A Putative mandelate race 47.5 58 0.002 27.3 7.4 110 62-176 181-297 (371)
352 4dmm_A 3-oxoacyl-[acyl-carrier 47.5 30 0.001 27.4 5.4 76 72-147 29-114 (269)
353 3v2g_A 3-oxoacyl-[acyl-carrier 47.5 32 0.0011 27.3 5.5 76 72-147 32-117 (271)
354 3gk3_A Acetoacetyl-COA reducta 47.3 75 0.0026 24.9 7.7 76 72-147 26-111 (269)
355 1rpn_A GDP-mannose 4,6-dehydra 46.9 60 0.002 26.2 7.3 99 72-170 15-129 (335)
356 1chr_A Chloromuconate cycloiso 46.9 1.3E+02 0.0043 25.2 10.4 81 94-176 215-297 (370)
357 2j9r_A Thymidine kinase; TK1, 46.8 37 0.0013 26.3 5.5 93 81-177 44-136 (214)
358 2e8y_A AMYX protein, pullulana 46.8 8.6 0.0003 35.8 2.2 26 153-178 313-338 (718)
359 1sb8_A WBPP; epimerase, 4-epim 46.8 59 0.002 26.6 7.3 97 73-170 29-145 (352)
360 4aie_A Glucan 1,6-alpha-glucos 46.8 11 0.00038 33.4 2.8 26 153-178 77-102 (549)
361 3tj4_A Mandelate racemase; eno 46.6 96 0.0033 26.0 8.6 83 90-174 220-304 (372)
362 2ya0_A Putative alkaline amylo 46.5 11 0.00039 34.9 3.0 30 150-179 249-278 (714)
363 2wm3_A NMRA-like family domain 46.3 23 0.00078 28.4 4.5 97 73-174 7-112 (299)
364 3gvc_A Oxidoreductase, probabl 46.1 55 0.0019 26.0 6.8 74 72-147 30-111 (277)
365 3guy_A Short-chain dehydrogena 46.1 45 0.0016 25.4 6.1 61 73-137 3-67 (230)
366 3sju_A Keto reductase; short-c 46.1 61 0.0021 25.7 7.1 75 72-147 25-109 (279)
367 3a11_A Translation initiation 46.0 77 0.0026 26.4 7.7 98 72-175 143-249 (338)
368 2c5a_A GDP-mannose-3', 5'-epim 46.0 73 0.0025 26.5 7.8 92 73-170 31-137 (379)
369 4h1h_A LMO1638 protein; MCCF-l 45.9 15 0.00052 30.5 3.4 60 89-148 8-87 (327)
370 3v2h_A D-beta-hydroxybutyrate 45.9 57 0.0019 26.0 6.8 77 72-148 26-113 (281)
371 3p19_A BFPVVD8, putative blue 45.7 45 0.0015 26.4 6.1 71 72-147 17-95 (266)
372 3l6e_A Oxidoreductase, short-c 45.7 61 0.0021 24.9 6.8 74 73-148 5-86 (235)
373 2rdx_A Mandelate racemase/muco 45.7 1.3E+02 0.0046 25.1 10.2 112 59-176 177-295 (379)
374 3imf_A Short chain dehydrogena 45.5 80 0.0027 24.6 7.6 75 72-147 7-91 (257)
375 4fc7_A Peroxisomal 2,4-dienoyl 45.4 67 0.0023 25.4 7.2 76 72-147 28-113 (277)
376 3un1_A Probable oxidoreductase 45.4 70 0.0024 25.1 7.2 68 72-147 29-104 (260)
377 3i4k_A Muconate lactonizing en 45.4 91 0.0031 26.3 8.3 47 128-176 256-303 (383)
378 2bgk_A Rhizome secoisolaricire 45.3 28 0.00096 27.4 4.9 75 72-146 17-99 (278)
379 1lwj_A 4-alpha-glucanotransfer 45.2 12 0.00042 32.3 2.8 27 152-178 66-92 (441)
380 3rkr_A Short chain oxidoreduct 45.0 50 0.0017 25.8 6.3 76 72-147 30-114 (262)
381 2dt5_A AT-rich DNA-binding pro 44.8 42 0.0014 25.9 5.6 105 57-178 64-173 (211)
382 2dh2_A 4F2 cell-surface antige 44.5 14 0.00049 31.8 3.1 28 152-179 78-105 (424)
383 2ox4_A Putative mandelate race 44.4 35 0.0012 29.1 5.5 114 59-175 197-317 (403)
384 4e4u_A Mandalate racemase/muco 44.4 91 0.0031 26.6 8.2 112 61-175 191-309 (412)
385 1ud2_A Amylase, alpha-amylase; 44.3 16 0.00056 31.9 3.5 27 152-178 77-103 (480)
386 3ak4_A NADH-dependent quinucli 44.3 61 0.0021 25.3 6.7 74 72-147 13-94 (263)
387 3bh4_A Alpha-amylase; calcium, 44.2 16 0.00056 31.9 3.5 28 151-178 74-101 (483)
388 2ehd_A Oxidoreductase, oxidore 44.2 1E+02 0.0034 23.4 7.9 73 72-147 6-86 (234)
389 8abp_A L-arabinose-binding pro 44.1 21 0.00073 28.4 4.0 64 106-174 20-87 (306)
390 3ppi_A 3-hydroxyacyl-COA dehyd 44.0 58 0.002 25.7 6.6 64 72-137 31-96 (281)
391 3gd6_A Muconate cycloisomerase 44.0 31 0.0011 29.3 5.1 112 61-176 176-296 (391)
392 1k4i_A 3,4-dihydroxy-2-butanon 44.0 40 0.0014 26.5 5.2 23 152-174 190-212 (233)
393 1wza_A Alpha-amylase A; hydrol 44.0 15 0.0005 32.3 3.1 27 152-178 78-104 (488)
394 1wpc_A Glucan 1,4-alpha-maltoh 43.9 17 0.00057 31.9 3.5 28 151-178 78-105 (485)
395 4dqx_A Probable oxidoreductase 43.9 75 0.0026 25.2 7.3 75 72-148 28-110 (277)
396 3r3h_A O-methyltransferase, SA 43.7 64 0.0022 25.1 6.7 122 55-183 46-177 (242)
397 3u5t_A 3-oxoacyl-[acyl-carrier 43.6 33 0.0011 27.2 5.0 66 72-137 28-97 (267)
398 3ksu_A 3-oxoacyl-acyl carrier 43.5 95 0.0032 24.3 7.8 66 72-137 12-83 (262)
399 3h7a_A Short chain dehydrogena 43.5 69 0.0024 24.9 6.9 66 72-137 8-76 (252)
400 3m9w_A D-xylose-binding peripl 43.5 30 0.001 27.7 4.9 70 100-174 14-88 (313)
401 1ht6_A AMY1, alpha-amylase iso 43.5 14 0.00047 31.6 2.8 26 153-178 66-91 (405)
402 1hvx_A Alpha-amylase; hydrolas 43.5 17 0.00058 32.2 3.5 28 151-178 77-104 (515)
403 3ko8_A NAD-dependent epimerase 43.4 1.1E+02 0.0037 24.3 8.3 89 74-170 3-105 (312)
404 2o56_A Putative mandelate race 43.3 34 0.0012 29.2 5.3 114 59-175 203-323 (407)
405 2o23_A HADH2 protein; HSD17B10 43.2 69 0.0024 24.8 6.9 74 72-147 13-94 (265)
406 1wuf_A Hypothetical protein LI 43.2 37 0.0013 28.8 5.5 47 128-176 263-310 (393)
407 1x1t_A D(-)-3-hydroxybutyrate 43.0 76 0.0026 24.7 7.1 76 72-147 5-91 (260)
408 3dip_A Enolase; structural gen 42.9 1.1E+02 0.0036 26.2 8.4 115 60-177 202-324 (410)
409 1jae_A Alpha-amylase; glycosid 42.8 13 0.00046 32.4 2.7 31 148-178 67-97 (471)
410 4ibo_A Gluconate dehydrogenase 42.8 53 0.0018 26.0 6.1 75 72-147 27-111 (271)
411 3ghf_A Septum site-determining 42.8 77 0.0026 21.9 6.2 54 116-173 14-78 (120)
412 1gcy_A Glucan 1,4-alpha-maltot 42.7 18 0.00061 32.2 3.5 29 150-178 87-115 (527)
413 1mxg_A Alpha amylase; hyperthe 42.6 18 0.00061 31.3 3.4 28 151-178 82-109 (435)
414 2p5y_A UDP-glucose 4-epimerase 42.5 98 0.0033 24.6 7.9 92 74-170 3-109 (311)
415 3ozy_A Putative mandelate race 42.1 1E+02 0.0035 26.0 8.1 114 59-175 183-304 (389)
416 4e5s_A MCCFLIKE protein (BA_56 41.9 26 0.00089 29.2 4.2 60 89-148 8-87 (331)
417 3nyw_A Putative oxidoreductase 41.8 32 0.0011 26.9 4.7 66 72-137 8-79 (250)
418 1ek6_A UDP-galactose 4-epimera 41.7 44 0.0015 27.2 5.7 97 73-170 4-124 (348)
419 3tzq_B Short-chain type dehydr 41.7 51 0.0017 26.0 5.9 74 72-147 12-93 (271)
420 3ezx_A MMCP 1, monomethylamine 41.5 45 0.0015 25.7 5.3 81 94-176 93-184 (215)
421 3tr6_A O-methyltransferase; ce 41.5 1.1E+02 0.0037 22.9 7.9 119 55-183 50-181 (225)
422 3oid_A Enoyl-[acyl-carrier-pro 41.4 73 0.0025 24.9 6.8 75 72-147 5-90 (258)
423 4fgs_A Probable dehydrogenase 41.4 93 0.0032 24.9 7.4 62 72-137 30-95 (273)
424 3f9i_A 3-oxoacyl-[acyl-carrier 41.4 50 0.0017 25.5 5.7 74 72-147 15-92 (249)
425 1vhx_A Putative holliday junct 41.0 55 0.0019 23.6 5.4 53 128-180 43-102 (150)
426 3tla_A MCCF; serine protease, 41.0 48 0.0016 28.1 5.7 59 90-148 40-118 (371)
427 2z1k_A (NEO)pullulanase; hydro 40.9 16 0.00053 31.9 2.8 27 152-178 93-119 (475)
428 3ijr_A Oxidoreductase, short c 40.7 21 0.00073 28.7 3.5 66 72-137 48-117 (291)
429 2guy_A Alpha-amylase A; (beta- 40.7 16 0.00054 31.9 2.8 27 152-178 94-120 (478)
430 3tjr_A Short chain dehydrogena 40.5 65 0.0022 25.9 6.4 76 72-147 32-116 (301)
431 1hxh_A 3BETA/17BETA-hydroxyste 40.4 1.1E+02 0.0037 23.7 7.6 64 72-137 7-72 (253)
432 2wc7_A Alpha amylase, catalyti 40.3 15 0.00051 32.2 2.6 27 152-178 99-125 (488)
433 4ina_A Saccharopine dehydrogen 40.2 85 0.0029 26.7 7.4 76 73-148 4-85 (405)
434 3lyl_A 3-oxoacyl-(acyl-carrier 40.1 70 0.0024 24.6 6.4 75 72-147 6-90 (247)
435 4egf_A L-xylulose reductase; s 40.1 63 0.0022 25.4 6.2 76 72-147 21-106 (266)
436 1yb1_A 17-beta-hydroxysteroid 40.0 1.2E+02 0.0041 23.7 7.9 76 72-147 32-116 (272)
437 3grp_A 3-oxoacyl-(acyl carrier 40.0 60 0.0021 25.6 6.0 74 72-147 28-109 (266)
438 2qgy_A Enolase from the enviro 40.0 71 0.0024 27.0 6.8 116 59-177 182-304 (391)
439 1yxm_A Pecra, peroxisomal tran 39.9 69 0.0024 25.5 6.5 76 72-147 19-108 (303)
440 3o38_A Short chain dehydrogena 39.8 85 0.0029 24.4 6.9 77 72-148 23-110 (266)
441 3b4u_A Dihydrodipicolinate syn 39.8 1.1E+02 0.0037 24.8 7.6 29 140-169 134-162 (294)
442 3fv9_G Mandelate racemase/muco 39.4 1.3E+02 0.0045 25.3 8.4 48 128-177 254-302 (386)
443 3sr3_A Microcin immunity prote 39.4 26 0.0009 29.2 3.9 60 89-148 9-88 (336)
444 2pnf_A 3-oxoacyl-[acyl-carrier 39.1 74 0.0025 24.3 6.4 76 72-147 8-93 (248)
445 3pgx_A Carveol dehydrogenase; 39.0 69 0.0024 25.3 6.3 76 72-147 16-113 (280)
446 3gem_A Short chain dehydrogena 39.0 16 0.00054 29.0 2.4 71 72-146 28-106 (260)
447 1spx_A Short-chain reductase f 39.0 92 0.0032 24.4 7.1 66 72-137 7-78 (278)
448 3jy6_A Transcriptional regulat 38.7 33 0.0011 26.9 4.3 56 110-173 29-89 (276)
449 3edm_A Short chain dehydrogena 38.7 1.1E+02 0.0036 23.9 7.3 66 72-137 9-78 (259)
450 1kko_A 3-methylaspartate ammon 38.7 54 0.0018 28.1 5.8 94 81-176 253-359 (413)
451 3sc6_A DTDP-4-dehydrorhamnose 38.5 45 0.0015 26.3 5.1 81 73-173 7-102 (287)
452 3ezl_A Acetoacetyl-COA reducta 38.4 48 0.0017 25.7 5.2 67 71-137 13-83 (256)
453 3dm5_A SRP54, signal recogniti 38.1 1.8E+02 0.0061 25.2 9.0 124 56-179 75-225 (443)
454 3ioy_A Short-chain dehydrogena 38.1 56 0.0019 26.6 5.7 66 72-137 9-79 (319)
455 3qlj_A Short chain dehydrogena 38.0 1E+02 0.0034 25.0 7.3 66 72-137 28-106 (322)
456 3awd_A GOX2181, putative polyo 38.0 79 0.0027 24.4 6.5 76 72-147 14-98 (260)
457 3kjx_A Transcriptional regulat 38.0 61 0.0021 26.4 6.0 65 102-173 82-151 (344)
458 2ovl_A Putative racemase; stru 37.9 66 0.0022 27.0 6.2 114 59-175 179-299 (371)
459 3rd5_A Mypaa.01249.C; ssgcid, 37.8 33 0.0011 27.4 4.2 70 72-145 17-92 (291)
460 3gi1_A LBP, laminin-binding pr 37.7 50 0.0017 26.7 5.2 69 92-174 178-256 (286)
461 3lf2_A Short chain oxidoreduct 37.7 87 0.003 24.5 6.7 76 72-147 9-95 (265)
462 4gud_A Imidazole glycerol phos 37.6 40 0.0014 25.5 4.5 70 95-172 4-75 (211)
463 1oc2_A DTDP-glucose 4,6-dehydr 37.6 54 0.0018 26.7 5.6 99 73-173 6-121 (348)
464 3faw_A Reticulocyte binding pr 37.6 19 0.00065 34.4 3.0 30 149-178 363-392 (877)
465 3op4_A 3-oxoacyl-[acyl-carrier 37.5 86 0.0029 24.2 6.6 74 72-147 10-91 (248)
466 2qq6_A Mandelate racemase/muco 37.5 38 0.0013 28.9 4.7 114 59-175 198-318 (410)
467 1pq4_A Periplasmic binding pro 37.3 84 0.0029 25.4 6.6 69 92-174 189-265 (291)
468 1cyd_A Carbonyl reductase; sho 37.3 1.3E+02 0.0046 22.7 7.9 73 72-147 8-84 (244)
469 3tfo_A Putative 3-oxoacyl-(acy 37.0 1.2E+02 0.0041 23.8 7.4 75 72-147 5-89 (264)
470 3uug_A Multiple sugar-binding 37.0 25 0.00084 28.5 3.3 68 103-175 18-90 (330)
471 4iiu_A 3-oxoacyl-[acyl-carrier 37.0 62 0.0021 25.3 5.7 76 72-147 27-112 (267)
472 3b1s_B Flagellar biosynthetic 43.2 7.2 0.00025 25.6 0.0 25 158-182 29-53 (87)
473 1zja_A Trehalulose synthase; s 36.9 19 0.00066 32.2 2.8 27 152-178 76-102 (557)
474 2aaa_A Alpha-amylase; glycosid 36.8 18 0.0006 31.7 2.5 27 152-178 94-120 (484)
475 3dz1_A Dihydrodipicolinate syn 36.7 1.7E+02 0.0059 23.8 10.0 48 129-177 124-172 (313)
476 3d3w_A L-xylulose reductase; u 36.7 1.4E+02 0.0047 22.7 8.0 72 72-146 8-83 (244)
477 1ua7_A Alpha-amylase; beta-alp 36.7 17 0.00059 31.2 2.4 28 152-179 71-98 (422)
478 2ya1_A Putative alkaline amylo 36.7 18 0.0006 35.2 2.6 30 150-179 556-585 (1014)
479 1m53_A Isomaltulose synthase; 36.5 20 0.00068 32.2 2.8 27 152-178 89-115 (570)
480 1rvk_A Isomerase/lactonizing e 36.3 72 0.0025 26.8 6.2 114 59-175 188-309 (382)
481 1ry2_A Acetyl-coenzyme A synth 36.2 58 0.002 29.7 6.0 76 90-166 136-213 (663)
482 3a28_C L-2.3-butanediol dehydr 36.2 1.1E+02 0.0036 23.8 6.9 75 73-147 4-89 (258)
483 3dhu_A Alpha-amylase; structur 36.1 23 0.00079 30.6 3.2 26 153-178 81-106 (449)
484 2qde_A Mandelate racemase/muco 36.0 60 0.0021 27.5 5.7 115 60-177 178-299 (397)
485 3i4f_A 3-oxoacyl-[acyl-carrier 35.9 43 0.0015 26.2 4.6 75 72-146 8-92 (264)
486 1uok_A Oligo-1,6-glucosidase; 35.9 21 0.0007 32.0 2.8 26 153-178 76-101 (558)
487 2hq1_A Glucose/ribitol dehydro 35.9 44 0.0015 25.7 4.5 74 72-146 6-90 (247)
488 1h5q_A NADP-dependent mannitol 35.7 1.2E+02 0.0042 23.3 7.3 66 72-137 15-84 (265)
489 2ag5_A DHRS6, dehydrogenase/re 35.7 1.2E+02 0.0039 23.4 7.0 72 72-147 7-82 (246)
490 2uvd_A 3-oxoacyl-(acyl-carrier 35.5 86 0.0029 24.1 6.2 76 72-147 5-90 (246)
491 1fmc_A 7 alpha-hydroxysteroid 35.5 66 0.0022 24.7 5.6 76 72-147 12-96 (255)
492 3u9l_A 3-oxoacyl-[acyl-carrier 35.4 94 0.0032 25.4 6.7 76 72-147 6-95 (324)
493 1vl0_A DTDP-4-dehydrorhamnose 35.4 70 0.0024 25.2 5.8 83 71-173 12-109 (292)
494 1sui_A Caffeoyl-COA O-methyltr 35.1 1.6E+02 0.0053 22.8 9.8 124 55-183 65-197 (247)
495 2z1m_A GDP-D-mannose dehydrata 35.1 1.3E+02 0.0045 24.1 7.6 97 73-169 5-117 (345)
496 2bka_A CC3, TAT-interacting pr 35.0 37 0.0013 26.0 4.0 92 73-170 20-124 (242)
497 2d1y_A Hypothetical protein TT 35.0 1.5E+02 0.0052 22.8 7.7 71 72-147 7-85 (256)
498 3sho_A Transcriptional regulat 34.9 69 0.0023 23.5 5.3 37 136-176 85-123 (187)
499 3hvm_A Agmatine deiminase; hyd 34.9 26 0.00087 29.2 3.0 73 56-128 169-258 (330)
500 2cks_A Endoglucanase E-5; carb 34.9 29 0.00097 28.2 3.4 23 154-176 78-100 (306)
No 1
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=100.00 E-value=1.7e-35 Score=264.95 Aligned_cols=255 Identities=85% Similarity=1.281 Sum_probs=214.2
Q ss_pred CCcceeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCCceEEecchHHHHHHH
Q 024619 7 PGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAV 86 (265)
Q Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~~~ 86 (265)
+..++.+++++...+..+..++|+.++.++........+.+.|++.|++.++++++++++++|.++++++++|++|+.++
T Consensus 85 ~~~~~~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~~~g~~~~~~l~~~la~~~g~~~~i~~~sGt~al~~~ 164 (464)
T 1ibj_A 85 ASVSTLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAV 164 (464)
T ss_dssp CCHHHHHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHH
T ss_pred CCcCCeEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCccccCCCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHH
Confidence 45567789998324788999999999987654433445678899779999999999999999999899999999998755
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHH
Q 024619 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH 166 (265)
Q Consensus 87 ~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~ 166 (265)
..++++||+|++++|.|+++...+...++..|++++.++..|++++++++.+++++|++++|+||||.+.|+++|+++|+
T Consensus 165 l~~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~i~~la~ 244 (464)
T 1ibj_A 165 THLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAH 244 (464)
T ss_dssp HTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred HHHhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCceEEEEeCCCCCCCEeecHHHHHHHHH
Confidence 56889999999999999999866656678889999999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEEeCCcCCCCCcCCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHHHhc
Q 024619 167 AHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 246 (265)
Q Consensus 167 ~~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (265)
++|+++|+||+|+.+....+...+.|+++.|+||+++++.|+++|+++++++.+.+.+.......+..+++..++.+.+.
T Consensus 245 ~~gi~livDea~~~g~~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~a 324 (464)
T 1ibj_A 245 AQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRG 324 (464)
T ss_dssp TTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHH
T ss_pred HcCCEEEEECCCcccccCChhhcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Confidence 99999999999998766556667899999999999988889999999998756656566665556677788888888888
Q ss_pred cCchHhhHHHHhhch
Q 024619 247 VKTMALRVEKQQVCF 261 (265)
Q Consensus 247 l~~~~~~~~~~~~~~ 261 (265)
++.+..++++...++
T Consensus 325 l~~~~~r~~~~~~~~ 339 (464)
T 1ibj_A 325 IKTMALRIEKQQENA 339 (464)
T ss_dssp HTTHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHH
Confidence 887666665554443
No 2
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.2e-36 Score=263.92 Aligned_cols=260 Identities=30% Similarity=0.475 Sum_probs=222.8
Q ss_pred CCCCCcceeEeeccCCCCCCCCCCCCeeeccccccCCC--------CCCCCCccCCCCChhHHHHHHHHHhHhCCCceEE
Q 024619 4 EEEPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSA--------TENGPYDYTRSGNPTRDALESLLAKLDKADRALC 75 (265)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--------~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~ 75 (265)
|...+.++.+++-+...+..|...+|++++.++..+.. .....+.|++.++|.++++++++++++|.+++++
T Consensus 22 ~~~~~~~t~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~~~g~~~~~~ 101 (414)
T 3ndn_A 22 PDGVSQATVGVRGGMLRSGFEETAEAMYLTSGYVYGSAAVAEKSFAGELDHYVYSRYGNPTVSVFEERLRLIEGAPAAFA 101 (414)
T ss_dssp CTTCCHHHHHHHTTCCCCTTCBSSCCBCCCSBBCCSSHHHHHHHHTTSSCCCCBTTTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred cCCCCccceeeecCCCCCCCCCcCCCcccCCceecCChHHHHHHHhCCcCCcCcCCCCChHHHHHHHHHHHHHCCCcEEE
Confidence 44556677888887556778999999999999876553 2345688999999999999999999999999999
Q ss_pred ecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccc
Q 024619 76 FTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQ 154 (265)
Q Consensus 76 ~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~ 154 (265)
+++|++|+. ++..++++||+|++++|.|+++...+...++..|+++++++.+|++++++++.+++++|++++|+||+|.
T Consensus 102 ~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~~t~~v~le~p~NptG~ 181 (414)
T 3ndn_A 102 TASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVPTQAVFFETPSNPMQS 181 (414)
T ss_dssp ESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSSCCSEEEEESSCTTTCC
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCc
Confidence 999999986 6778899999999999999998866655556689999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCC
Q 024619 155 ICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 234 (265)
Q Consensus 155 ~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~ 234 (265)
+.|+++|.++|+++|+++|+|++|+.+....+...+.|+++.|++|++++++.+++|+++.+++.+...+.......+..
T Consensus 182 ~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~ 261 (414)
T 3ndn_A 182 LVDIAAVTELAHAAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPA 261 (414)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCC
T ss_pred cccHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999998776667788899999999999965444889999998876654555555666777
Q ss_pred CChhHHHHHHhccCchHhhHHHHhhchhc
Q 024619 235 LAPFDCWICLRGVKTMALRVEKQQVCFFD 263 (265)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 263 (265)
+++..++..++.++.+..+++++.+|+..
T Consensus 262 ~~~~~a~~~~~~l~~l~~r~~~~~~~a~~ 290 (414)
T 3ndn_A 262 MSAFNAWVLLKGLETLAIRVQHSNASAQR 290 (414)
T ss_dssp CCHHHHHHHHHHGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999988888887777654
No 3
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=100.00 E-value=2.2e-35 Score=259.76 Aligned_cols=258 Identities=43% Similarity=0.680 Sum_probs=224.5
Q ss_pred CCcceeEeeccCCCC-CCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCCceEEecchHHHHHH
Q 024619 7 PGVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA 85 (265)
Q Consensus 7 ~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~~ 85 (265)
.+.++..++-+...+ ..|...+|++++.++..........+.|++.++|..+++++.++++.|.++.+++++|++|+.+
T Consensus 18 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~l~g~~~~~~~~sG~~Ai~~ 97 (400)
T 3nmy_A 18 LSLATLAIHGGQSPDPSTGAVMPPIYATSTYAQSSPGEHQGFEYSRTHNPTRFAYERCVAALEGGTRAFAFASGMAATST 97 (400)
T ss_dssp CCHHHHHHHTTCCCCTTTCBSSCCBCCCSBBBCSBTTBSSSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHH
T ss_pred CCcchheeeCCCCCCCCCCCcCCCccccceeeccCccccCCcccccCCCHHHHHHHHHHHHHhCCCCEEEecCHHHHHHH
Confidence 355677888775444 4899999999999988766555678899999999999999999999999999999999999977
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHhh-cCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHH
Q 024619 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRV-TPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 164 (265)
Q Consensus 86 ~~~~~~~g~~viv~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~ 164 (265)
++.++++||+|+++++.|++....+... ++..|++++.++..|++++++++.+++++|++++|+||+|.+.|+++|.++
T Consensus 98 ~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~l 177 (400)
T 3nmy_A 98 VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVI 177 (400)
T ss_dssp HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCCCHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHH
Confidence 7888999999999999999777665554 566799999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEEeCCcCCCCCcCCCCCCccEEEeccccccccCCCceee-EEEeechhHHHHHHHHHHhccCCCChhHHHHH
Q 024619 165 AHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAG-VLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 243 (265)
Q Consensus 165 a~~~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g~~~G-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (265)
|+++|+++|+|++|+.+....+...+.|+++.|++|+++|++..++| +++..++.+.+.+.......+..+++..++.+
T Consensus 178 a~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~ 257 (400)
T 3nmy_A 178 ARKHGLLTVVDNTFASPMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLA 257 (400)
T ss_dssp HHHTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHH
T ss_pred HHHcCCEEEEECCCcccccCChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 99999999999999977776777889999999999999877666678 67777777777777777788888999999999
Q ss_pred HhccCchHhhHHHHhhchhcc
Q 024619 244 LRGVKTMALRVEKQQVCFFDL 264 (265)
Q Consensus 244 ~~~l~~~~~~~~~~~~~~~~l 264 (265)
++.++.+..+++++.+|+..+
T Consensus 258 l~~l~~l~~r~~~~~~~a~~l 278 (400)
T 3nmy_A 258 LRGLKTLPLRMRAHCENALAL 278 (400)
T ss_dssp HHHHTTHHHHHHHHHHHHHHH
T ss_pred HHhHhHHHHHHHHHHHHHHHH
Confidence 999999988888888877653
No 4
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=100.00 E-value=3.7e-34 Score=251.45 Aligned_cols=256 Identities=43% Similarity=0.697 Sum_probs=220.2
Q ss_pred CcceeEeeccCCCC-CCCCCCCCeeeccccccCCCCCC-CCCccCCCCChhHHHHHHHHHhHhCCCceEEecchHHHHH-
Q 024619 8 GVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSATEN-GPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA- 84 (265)
Q Consensus 8 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~-~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~- 84 (265)
++++..++-+...+ ..|...+|++++.++..+..... ..+.|++.+++..+++++.+++++|.++++++++|++|+.
T Consensus 17 ~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~y~r~~~~~~~~l~~~la~~~g~~~~~~~~sGt~A~~~ 96 (392)
T 3qhx_A 17 GLATRAIHSGYRPDPATGAVNAPIYASSTFAQDGVGGLRGGYEYARTGNPTRTALEAALAAVEDAAFGRAFSSGMAAADC 96 (392)
T ss_dssp CHHHHHHHSSCCCCTTTCBSSCCBCCCSBBCCSSTTCCBTTBCBTTTCCHHHHHHHHHHHHHTTCSEEEEESSHHHHHHH
T ss_pred CcchhheeCCCCCCCCCCCccCCcccCcceEecCcccccCCccccCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHH
Confidence 45667777764333 47899999999998776554332 3688999999999999999999999999999999999986
Q ss_pred HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHH
Q 024619 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 164 (265)
Q Consensus 85 ~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~ 164 (265)
++..++++||+|+++.+.|+++...+...++..|++++.++.+|++++++++.+++++|++++|+||+|.+.|+++|.++
T Consensus 97 al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l 176 (392)
T 3qhx_A 97 ALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQL 176 (392)
T ss_dssp HHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred HHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHH
Confidence 66778999999999999999887777667788899999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEEeCCcCCCCCcCCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHHH
Q 024619 165 AHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 244 (265)
Q Consensus 165 a~~~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (265)
|+++|+++|+|++|+.+....+...+.|+++.|++|++++++++++|+++.++..+.+.+.......+...++..++.++
T Consensus 177 a~~~g~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~ 256 (392)
T 3qhx_A 177 GADSSAKVLVDNTFASPALQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTM 256 (392)
T ss_dssp HHHHTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred HHHcCCEEEEECCCcccccCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 99999999999999988777777889999999999999766558899999987667676777777778888999999999
Q ss_pred hccCchHhhHHHHhhchhc
Q 024619 245 RGVKTMALRVEKQQVCFFD 263 (265)
Q Consensus 245 ~~l~~~~~~~~~~~~~~~~ 263 (265)
+.++.+..++++..+++..
T Consensus 257 ~~l~~l~~~~~~~~~~~~~ 275 (392)
T 3qhx_A 257 RGLKTLVLRMQRHSENAAA 275 (392)
T ss_dssp HHHTTHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHH
Confidence 9999887777777776654
No 5
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=100.00 E-value=6.3e-34 Score=251.43 Aligned_cols=255 Identities=23% Similarity=0.392 Sum_probs=213.7
Q ss_pred CcceeEeeccCCCC-CCCCCCCCeeeccccccCCCC--------C-CCCCccCCCCChhHHHHHHHHHhHhCCCceEEec
Q 024619 8 GVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------E-NGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (265)
Q Consensus 8 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~--------~-~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~ 77 (265)
+.++..++-+...+ ..|...+|++++.++..+... . .+.+.|++.++|.++++++.+++++|.++.++++
T Consensus 25 ~~~t~~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~s 104 (415)
T 2fq6_A 25 KLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVLFP 104 (415)
T ss_dssp CHHHHHHHTTCCHHHHTTBSSCCBCCCSCBCCSSHHHHHHHHHTTTTTSCCCTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CcCceeEeCCCCCCCCCCCEeCCeecccceeeCCHHHHHHhhccccCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeC
Confidence 45566777663333 379999999999998765421 1 3568899999999999999999999999899999
Q ss_pred chHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccc
Q 024619 78 SGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (265)
Q Consensus 78 ~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~ 156 (265)
+|++|+. ++..++++||+|+++.+.|++....+...++..|+++.+++.+|++++++++++++++|++++|+||+|.+.
T Consensus 105 sGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~~tklV~~e~~~NptG~v~ 184 (415)
T 2fq6_A 105 CGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEVH 184 (415)
T ss_dssp SHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCTTEEEEEEESSCTTTCCCC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhccCCcEEEEECCCCCCCEee
Confidence 9999986 667789999999999999999887776667778999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHH--cCCEEEEeCCcCCCCCcCCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCC
Q 024619 157 DIRKIAEMAHA--HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 234 (265)
Q Consensus 157 ~l~~i~~~a~~--~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~ 234 (265)
|+++|+++|++ +|+++++|++|+.+....+...+.|+++.|++|+++++++.++|+++.+++. .+.+.......+..
T Consensus 185 dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~-~~~l~~~~~~~G~~ 263 (415)
T 2fq6_A 185 DVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARC-WEQLRENAYLMGQM 263 (415)
T ss_dssp CHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTT-HHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHhhcCCCEEEEECCCcccccCCccccCCeEEEEeCccccCCCCCceEEEEEeCHHH-HHHHHHHHHhcCCC
Confidence 99999999999 9999999999998876667778899999999999977666668999887754 44455555555667
Q ss_pred CChhHHHHHHhccCchHhhHHHHhhchhc
Q 024619 235 LAPFDCWICLRGVKTMALRVEKQQVCFFD 263 (265)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 263 (265)
+++..++..++.++.+..++++..+|+..
T Consensus 264 ~~~~~a~~~~~~l~~l~~r~~~~~~n~~~ 292 (415)
T 2fq6_A 264 VDADTAYITSRGLRTLGVRLRQHHESSLK 292 (415)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 78888888888888887777777776654
No 6
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=100.00 E-value=1.1e-33 Score=249.38 Aligned_cols=254 Identities=42% Similarity=0.709 Sum_probs=205.4
Q ss_pred CcceeEeeccCCCC-CC-CCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCCceEEecchHHHHH-
Q 024619 8 GVSTLLMNFSNEFD-PY-GALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA- 84 (265)
Q Consensus 8 ~~~~~~~~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~- 84 (265)
+.++..++-+...+ .. |...+|++++.++..+.......+.|++.++|...++++.+++++|.++.+++++|++|+.
T Consensus 18 ~~~t~~~h~g~~~~~~~~~~~~~pi~~stt~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~~~g~~~~i~~~sG~~ai~~ 97 (403)
T 3cog_A 18 HFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEYSRSGNPTRNCLEKAVAALDGAKYCLAFASGLAATVT 97 (403)
T ss_dssp THHHHHHHTTCCGGGSTTCBSSCCBCCCSCBCCC--------------CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHH
T ss_pred CcccEEEeCCCCCCcCCCCCccCCeeccceeecCCccccCCCcccCCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHH
Confidence 45577777763323 35 8999999999987765544445678888888999999999999999989999999998886
Q ss_pred HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHH
Q 024619 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 164 (265)
Q Consensus 85 ~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~ 164 (265)
++. ++++||+|++++|.|++....+...++..|++++.++.+|++++++++.+++++|++++|+||+|.+.|+++|+++
T Consensus 98 ~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~l 176 (403)
T 3cog_A 98 ITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHI 176 (403)
T ss_dssp HHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred HHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHH
Confidence 555 8899999999999999877666666788899999999999999999999999999999999999999999999999
Q ss_pred HHHcC-CEEEEeCCcCCCCCcCCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHH
Q 024619 165 AHAHG-ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 243 (265)
Q Consensus 165 a~~~~-~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (265)
|+++| +++|+|++|+.+....+...+.|+++.|++|++++++++++|+++++++.+.+.+.......+...++..++..
T Consensus 177 a~~~g~~~livD~~~~~~~~~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~ 256 (403)
T 3cog_A 177 VHKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLC 256 (403)
T ss_dssp HTSSSCCEEEEECTTTCTTTCCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred HHHcCCCEEEEECCCcccccCCccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 99999 99999999998877667778899999999999988888789999987656666666666666777888888898
Q ss_pred HhccCchHhhHHHHhhchh
Q 024619 244 LRGVKTMALRVEKQQVCFF 262 (265)
Q Consensus 244 ~~~l~~~~~~~~~~~~~~~ 262 (265)
++.++.+..+++++.+|+.
T Consensus 257 ~~~l~~l~~r~~~~~~n~~ 275 (403)
T 3cog_A 257 NRGLKTLHVRMEKHFKNGM 275 (403)
T ss_dssp HHHHTTHHHHHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHHHH
Confidence 8899888777777666653
No 7
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=100.00 E-value=2.4e-34 Score=255.07 Aligned_cols=256 Identities=33% Similarity=0.468 Sum_probs=190.6
Q ss_pred cceeEeeccCCCC-CCCCCCCCeeeccccccCCCC--------CCCCCccCCCCChhHHHHHHHHHhHhCCCceEEecch
Q 024619 9 VSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (265)
Q Consensus 9 ~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g 79 (265)
.++..++-+...+ ..|...+|++++.++..+... ....+.|++.++|..+++++++++++|.+..+++++|
T Consensus 27 ~~t~~~h~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~~~sG 106 (430)
T 3ri6_A 27 FTTRALHVPKAKRDVHGALRTPVYDNAAFEFENSDEIAQVSLGRALGHVYSRSSNPTVEDLEQRLKNLTGALGVLALGSG 106 (430)
T ss_dssp HHHHHHCCC--------------------------------------------CCHHHHHHHHHHHHHHTCSEEEEESCH
T ss_pred cchhheeCCCCCCCCCCCcCCCcccccccccCCHHHHHHHhhcccCCccccCCCCHHHHHHHHHHHHHHCCCcEEEECCH
Confidence 4566777764333 478999999999988665432 2246789999999999999999999999999999999
Q ss_pred HHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccH
Q 024619 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (265)
Q Consensus 80 ~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l 158 (265)
++|+. ++..++++||+|+++++.|+++...+...++..|++++.++.+|++++++++++++++|++++|+||+|.+.|+
T Consensus 107 ~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl 186 (430)
T 3ri6_A 107 MAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACDETTKLLFLETISNPQLQVADL 186 (430)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCCeecCH
Confidence 99986 77788999999999999999998766556778899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCcCCCCCCccEEEeccccccccCCCceeeEEEeechh-H-----------------
Q 024619 159 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-L----------------- 220 (265)
Q Consensus 159 ~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~-~----------------- 220 (265)
++|.++|+++|+++|+|++|+.+....+...+.|+++.|++|+++|++..++|+++.+... +
T Consensus 187 ~~i~~la~~~g~~livD~a~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~ 266 (430)
T 3ri6_A 187 EALSKVVHAKGIPLVVDTTMTPPYLLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMA 266 (430)
T ss_dssp HHHHHHHHTTTCCEEEECTTSCTTTCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGH
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhh
Confidence 9999999999999999999999888778888999999999999987766678888854331 1
Q ss_pred --HHHHHHHHHhccCCCChhHHHHHHhccCchHhhHHHHhhchhcc
Q 024619 221 --AKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQVCFFDL 264 (265)
Q Consensus 221 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l 264 (265)
...........+..+++..+++.+++++.+..+++++.+|+..+
T Consensus 267 ~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~~l~~r~~~~~~na~~l 312 (430)
T 3ri6_A 267 FLYKARKEVFQNLGPSLSPHNAYLQSLGLETMALRIERSCQNAQEL 312 (430)
T ss_dssp HHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 11122233456777899999999999999999999888887654
No 8
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=100.00 E-value=3.3e-33 Score=245.17 Aligned_cols=257 Identities=35% Similarity=0.600 Sum_probs=211.1
Q ss_pred CCCCcceeEeeccCCCCCCCCCCCCeeeccccccCCC--------CCCCCCccCCCCChhHHHHHHHHHhHhCCCceEEe
Q 024619 5 EEPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSA--------TENGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (265)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--------~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~ 76 (265)
+..+.++..++-+ ..+..|...+|++++.++..+.. .....+.|++.+++..+++++.+++++|.++.+++
T Consensus 2 ~~~~~~t~~~~~~-~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~i~~ 80 (389)
T 3acz_A 2 TAQDITTTLLHPK-GDHVLHSHAYPIFQTSTFCFDSTQQGADLFMGKGEGHIYSRLGNPTVEQFEEMVCSIEGAAGSAAF 80 (389)
T ss_dssp -CCCHHHHHHSCS-SCCSTTBSSCCBCCCSBBCCSSHHHHHHHHTTCSSCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCcceeEEecC-CCCCCCCCCCCcccCCceecCChHHHHHhhcCCCCCcccCCCCChHHHHHHHHHHHHhCCCeEEEe
Confidence 4455667777777 44558999999999999875442 12346889988899999999999999999999999
Q ss_pred cchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCcccc
Q 024619 77 TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI 155 (265)
Q Consensus 77 ~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~ 155 (265)
++|++|+. ++..++++||+|+++++.|+++...+...++..|++++.++..|++++++++.+++++|++++|+||+|.+
T Consensus 81 ~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~ 160 (389)
T 3acz_A 81 GSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKPNTKMVYLESPANPTCKV 160 (389)
T ss_dssp SSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCTTEEEEEEESSCTTTCCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCee
Confidence 99999986 56667899999999999999887666555677899999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCC
Q 024619 156 CDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 235 (265)
Q Consensus 156 ~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~ 235 (265)
.|+++|.++|+++|+++|+|++|+.+....+...+.|+++.|++|+++++++..+|+++.++..+.+.+.......+...
T Consensus 161 ~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 240 (389)
T 3acz_A 161 SDIKGIAVVCHERGARLVVDATFTSPCFLKPLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLM 240 (389)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCC
T ss_pred cCHHHHHHHHHHcCCEEEEECCCccccccCccccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999988766667788999999999999776543349998887344444555544456667
Q ss_pred ChhHHHHHHhccCchHhhHHHHhhchh
Q 024619 236 APFDCWICLRGVKTMALRVEKQQVCFF 262 (265)
Q Consensus 236 ~~~~~~~~~~~l~~~~~~~~~~~~~~~ 262 (265)
++..++..++.++.+..++++..+++.
T Consensus 241 ~~~~~~~~~~~l~~l~~r~~~~~~~~~ 267 (389)
T 3acz_A 241 APMDAFLCARGMKTLPIRMQIHMENGL 267 (389)
T ss_dssp CHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CHHHHHHHHcCccHHHHHHHHHHHHHH
Confidence 888888888999887777666665544
No 9
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=100.00 E-value=9e-33 Score=245.73 Aligned_cols=253 Identities=30% Similarity=0.539 Sum_probs=210.1
Q ss_pred ceeEeeccCCCC---CCCCCCCCeeeccccccCCCC--------CCCCCccCCCCChhHHHHHHHHHhHhCCCceEEecc
Q 024619 10 STLLMNFSNEFD---PYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (265)
Q Consensus 10 ~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~ 78 (265)
++..++-+...+ ..|...+|++++.++..+... ....+.|++.+++..+++++.+++++|.++.+++++
T Consensus 58 ~t~~~~~~~~~~~~~~~~~~~~Pi~~t~t~~~~~~~~~~~~~~~~~~~~~y~r~~~~~~~~l~~~lA~l~g~~~~v~~~s 137 (445)
T 1qgn_A 58 GSVAIHAGERLGRGIVTDAITTPVVNTSAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTLLMAS 137 (445)
T ss_dssp HHHHHHTTTTTCCSSCCSBSSCCBCCCSBBCBSSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHHTCSEEEEESC
T ss_pred ccEEEecCCCCCcCCCCCCcCCCcccCCceecCCHHHHHhhhccccCCccccCCCChHHHHHHHHHHHHhCCCcEEEeCC
Confidence 455666664333 478999999999998765421 234678888899999999999999999999999999
Q ss_pred hHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCc-eEEEEecCCCCccccc
Q 024619 79 GMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWT-KLVWVESPTNPRQQIC 156 (265)
Q Consensus 79 g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~-~~i~~~~~~np~G~~~ 156 (265)
|++|+. ++..++++||+|+++++.|+++...+...++..|+++++++.+|++++++++++++ ++|++++|+||+|.+.
T Consensus 138 G~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~tv~lV~le~p~NptG~v~ 217 (445)
T 1qgn_A 138 GMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFTESPTNPFLRCV 217 (445)
T ss_dssp HHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHSCEEEEEEESSCTTTCCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCCCCEEEEeCCCCCCCccc
Confidence 998886 66778999999999999999887665556778899999999999999999998888 9999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCC
Q 024619 157 DIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 236 (265)
Q Consensus 157 ~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~ 236 (265)
|+++|.++|+++|+++++|++|+.+....+...+.|+++.|++|++++++.+++|+++.+++.+ +.+.......+..++
T Consensus 218 dl~~I~~la~~~g~~livD~a~~~~~~~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~-~~l~~~~~~~g~~~~ 296 (445)
T 1qgn_A 218 DIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLV-SEIRNLHHILGGALN 296 (445)
T ss_dssp CHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHH-HHHHHHHHHHCCCCC
T ss_pred CHHHHHHHHHHcCCEEEEECCCcccccCCccccCCEEEEECCcccccccccceEEEEEECHHHH-HHHHHHHHHhCCCCC
Confidence 9999999999999999999999988776777788999999999999765546789998877544 444455555666778
Q ss_pred hhHHHHHHhccCchHhhHHHHhhchhc
Q 024619 237 PFDCWICLRGVKTMALRVEKQQVCFFD 263 (265)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~~~ 263 (265)
+..++..++.++.+..+++++.+++..
T Consensus 297 ~~~a~~~~~~l~~l~~r~~~~~~~a~~ 323 (445)
T 1qgn_A 297 PNAAYLIIRGMKTLHLRVQQQNSTALR 323 (445)
T ss_dssp HHHHHHHHHHGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 888888889999887777777766543
No 10
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=1.6e-32 Score=241.16 Aligned_cols=252 Identities=40% Similarity=0.651 Sum_probs=205.0
Q ss_pred CcceeEeeccCCCCCCCCCCCCeeeccccccCCCCCC-CCCccCCCCChhHHHHHHHHHhHhCCCceEEecchHHHHH-H
Q 024619 8 GVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATEN-GPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-A 85 (265)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~ 85 (265)
+.++..++-+...+..|...+|++++.++..+..... ..+.|++.+++..+++++.+++++|.++.+++++|++|+. +
T Consensus 7 ~~~t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~la~~~g~~~~i~~~sGt~a~~~a 86 (393)
T 1n8p_A 7 KFATKAIHAGEHVDVHGSVIEPISLSTTFKQSSPANPIGTYEYSRSQNPNRENLERAVAALENAQYGLAFSSGSATTATI 86 (393)
T ss_dssp CHHHHHHHTTCCCCSSCCSSCCBCCCSBCCBSSSSSBSSSCCBTTTCCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHH
T ss_pred CccceEEecCCCccCCCCcCCCcccccceeeccccccccCcceecCCChhHHHHHHHHHHHhCCCcEEEECChHHHHHHH
Confidence 4556677766333467999999999999876553322 4678888888889999999999999999999999999986 5
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHH
Q 024619 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 165 (265)
Q Consensus 86 ~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a 165 (265)
+. ++++||+|+++.|.|++....+...++..|++++.++.+| +++++++.+++++|++++|+||+|.+.|+++|.++|
T Consensus 87 l~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d-~~l~~~i~~~t~lv~~~~~~nptG~~~~l~~i~~la 164 (393)
T 1n8p_A 87 LQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLL-NDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLI 164 (393)
T ss_dssp HH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHH-HHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred HH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCCh-HHHHHhcccCceEEEEECCCCCcceecCHHHHHHHH
Confidence 56 8899999999999998776555456788899999999888 999999998999999999999999999999999999
Q ss_pred HHc----CCEEEEeCCcCCCCCcCCCCCCccEEEeccccccccCCCcee-eEEEeechhHHHHHHHHHHhccCCCChhHH
Q 024619 166 HAH----GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMA-GVLAVKGERLAKELYFLQNAEGSGLAPFDC 240 (265)
Q Consensus 166 ~~~----~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g~~~-G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (265)
+++ |+++|+|++|+.+....+...+.|+++.|+||++ |++|++. |+++.+++.+.+.+.......+..+++..+
T Consensus 165 ~~~~~~~~~~livD~a~~~~~~~~~~~~~~di~~~S~sK~~-g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~ 243 (393)
T 1n8p_A 165 KKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYI-NGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDA 243 (393)
T ss_dssp HHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTT-TCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred HHhCCCCCCEEEEeCCccccccCCHHHcCCeEEEEECcccc-cCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHH
Confidence 999 9999999999977665666678999999999999 5667666 999886555555555555545666677777
Q ss_pred HHHHhccCchHhhHHHHhhchh
Q 024619 241 WICLRGVKTMALRVEKQQVCFF 262 (265)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~~~ 262 (265)
+...+.++.+..++++..++..
T Consensus 244 ~~~~~~l~~~~~~~~~~~~~~~ 265 (393)
T 1n8p_A 244 WLTHRGLKTLHLRVRQAALSAN 265 (393)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHH
T ss_pred HHHHhccchHHHHHHHHHHHHH
Confidence 7777788877666666655544
No 11
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=2.7e-32 Score=240.55 Aligned_cols=253 Identities=34% Similarity=0.584 Sum_probs=201.1
Q ss_pred cceeEeeccCCCCCCCCCCCCeeeccccccCCC--------CCCCCCccCCCCChhHHHHHHHHHhHhCCCceEEecchH
Q 024619 9 VSTLLMNFSNEFDPYGALSTPLYQTATFKQPSA--------TENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGM 80 (265)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--------~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~ 80 (265)
.++..++-+...+..+...+|++++.++..+.. ...+.+.|++.|.+..+++++.+++++|.++.+++++|+
T Consensus 8 ~~t~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~~~~l~~~ia~~~g~~~~i~~~~g~ 87 (404)
T 1e5e_A 8 PATACIHANPQKDQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTEACVATSSGM 87 (404)
T ss_dssp HHHHHHHSSCCCCTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHH
T ss_pred ccceeeecCCCCCCCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccCCcChHHHHHHHHHHHHhCCCcEEEeCChH
Confidence 345566655222245777778888777654432 123567899888899999999999999999899999999
Q ss_pred HHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccHH
Q 024619 81 AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 159 (265)
Q Consensus 81 ~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~ 159 (265)
+|+. ++..++++||+|++++|.|+++...+...++..|++++.++..|++++++++.+++++|++++|+||||.+.|++
T Consensus 88 ~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l~ 167 (404)
T 1e5e_A 88 GAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPNTKIVYFETPANPTLKIIDME 167 (404)
T ss_dssp HHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCcEEEEECCCCCCCcccCHH
Confidence 9986 667789999999999999999887665566778999999999999999999998999999999999999999999
Q ss_pred HHHHHHHH-cCCEEEEeCCcCCCCCcCCCCCCccEEEeccccccccCCCcee-eEEEeechhHHHHHHHHHHhc-cCCCC
Q 024619 160 KIAEMAHA-HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMA-GVLAVKGERLAKELYFLQNAE-GSGLA 236 (265)
Q Consensus 160 ~i~~~a~~-~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g~~~-G~v~~~~~~~~~~~~~~~~~~-~~~~~ 236 (265)
+|+++|++ +|+++|+|++|+.+.+..+...+.|+++.|+||+++++ |.+. |+++++++.+.+.+....... +...+
T Consensus 168 ~i~~la~~~~~~~li~De~~~~~~~~~~~~~~~di~~~S~sK~~~~~-g~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~ 246 (404)
T 1e5e_A 168 RVCKDAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGH-TDVVAGLICGKADLLQQIRMVGIKDITGSVIS 246 (404)
T ss_dssp HHHHHHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCS-SCCCCEEEEECHHHHHHHHHTCCCCCCCCCCC
T ss_pred HHHHHHHhhcCCEEEEECCCchhhhCCccccCCEEEEEcCccccCCC-CCCeEEEEEECHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999 99999999999988765566678999999999999654 5565 999988866542333333333 45677
Q ss_pred hhHHHHHHhccCchHhhHHHHhhchh
Q 024619 237 PFDCWICLRGVKTMALRVEKQQVCFF 262 (265)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~~ 262 (265)
+..++...+.++.+..+.++...+..
T Consensus 247 ~~~~~~~~~~l~~~~~~~~~~~~~~~ 272 (404)
T 1e5e_A 247 PHDAWLITRGLSTLNIRMKAESENAM 272 (404)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHH
Confidence 77888888888877656555555443
No 12
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=8.3e-31 Score=229.47 Aligned_cols=252 Identities=37% Similarity=0.572 Sum_probs=201.6
Q ss_pred cceeEeeccCC-CCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCCceEEecchHHHHH-HH
Q 024619 9 VSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (265)
Q Consensus 9 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~ 86 (265)
.++..++.+.. .+..|...+|++++.++..........+.|++.+++...++++.+++++|.++.+++++|++|+. ++
T Consensus 5 ~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~~ 84 (386)
T 1cs1_A 5 QATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVT 84 (386)
T ss_dssp HHHHHHHTTTTCCTTTCBSSCCBCCCSBBCCSBTTBCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHH
T ss_pred cceeEEecCCCccccCCCCCCCccccceeeccccCCCCCcceeCCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHH
Confidence 34566676632 34579999999999998765544345678888888889999999999999988999999999986 66
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHH
Q 024619 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH 166 (265)
Q Consensus 87 ~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~ 166 (265)
..++++||+|+++.|.|++....+...++..|.+++.++.+|++++++++.+++++|++++++||||.+.|+++|.++|+
T Consensus 85 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~ 164 (386)
T 1cs1_A 85 TVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAR 164 (386)
T ss_dssp HHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHH
T ss_pred HHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhccCCcEEEEeCCCCCCCcccCHHHHHHHHH
Confidence 67789999999999999987665555668889999999999999999999889999999999999999999999999999
Q ss_pred HcCCEEEEeCCcCCCCCcCCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHHHhc
Q 024619 167 AHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 246 (265)
Q Consensus 167 ~~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (265)
++|+++|+||+|+.+....+...+.|+++.|++|++++|.+..+|+++.+++.+.+.+.......+...++..++...+.
T Consensus 165 ~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 244 (386)
T 1cs1_A 165 EVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRG 244 (386)
T ss_dssp HTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHH
T ss_pred HcCCEEEEECCCcccccCCccccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Confidence 99999999999998877656667899999999999976655445999888745555555555544555677777766666
Q ss_pred cCchHhhHHHHhhc
Q 024619 247 VKTMALRVEKQQVC 260 (265)
Q Consensus 247 l~~~~~~~~~~~~~ 260 (265)
++.+..+.+...++
T Consensus 245 l~~~~~~~~~~~~~ 258 (386)
T 1cs1_A 245 LRTLVPRMELAQRN 258 (386)
T ss_dssp HTTHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHH
Confidence 66554444444433
No 13
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=100.00 E-value=1.9e-31 Score=234.54 Aligned_cols=258 Identities=36% Similarity=0.597 Sum_probs=201.1
Q ss_pred CCCcceeEeeccCCC-CCCCCCCCCeeeccccccCCCC--------CCCCCccCCCCChhHHHHHHHHHhHhCCCceEEe
Q 024619 6 EPGVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (265)
Q Consensus 6 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~ 76 (265)
..+.++..++-+... +..+...+|++++.++..+... ....+.|++.+++..+++++.+++++|.++.+++
T Consensus 7 ~~~~~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~~~~i~~ 86 (398)
T 1gc0_A 7 LPGFATRAIHHGYDPQDHGGALVPPVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGEAGLAL 86 (398)
T ss_dssp CCCHHHHHHHTTCCGGGGTTBSSCCBCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCcCceeEeCCCCCCCCCCCcCCCccCCCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 345566777766322 3478888999998887654421 1234667777889999999999999999999999
Q ss_pred cchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCcccc
Q 024619 77 TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI 155 (265)
Q Consensus 77 ~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~ 155 (265)
++|++|+. ++..++++||+|+++.+.|+++...+...++..|++++.++..|++++++++.+++++|++++|+||+|.+
T Consensus 87 ~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~ 166 (398)
T 1gc0_A 87 ASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFESPANPNMHM 166 (398)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCccc
Confidence 99999886 67778899999999999999988776555677899999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHh-ccCC
Q 024619 156 CDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EGSG 234 (265)
Q Consensus 156 ~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~-~~~~ 234 (265)
.|+++|.++|+++|+++|+|++|+.+....+...+.|+++.|++|+++++++-.+|+++.+++.+.......... .+..
T Consensus 167 ~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~ 246 (398)
T 1gc0_A 167 ADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAV 246 (398)
T ss_dssp CCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCC
T ss_pred ccHHHHHHHHHHcCCEEEEECCCcccccCCchhhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCC
Confidence 999999999999999999999999877666667789999999999997665433599988876655444444444 5566
Q ss_pred CChhHHHHHHhccCchHhhHHHHhhchhc
Q 024619 235 LAPFDCWICLRGVKTMALRVEKQQVCFFD 263 (265)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 263 (265)
+++..++...+.++.+..+.++..+++..
T Consensus 247 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 275 (398)
T 1gc0_A 247 LSPHDAALLMRGIKTLNLRMDRHCANAQV 275 (398)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 78888888888888776666666666543
No 14
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.98 E-value=1.3e-30 Score=229.10 Aligned_cols=251 Identities=41% Similarity=0.680 Sum_probs=193.6
Q ss_pred ceeEeeccCCCC-CCCCCCCCeeeccccccCCC--------CCCCCCccCCCCChhHHHHHHHHHhHhCCCceEEecchH
Q 024619 10 STLLMNFSNEFD-PYGALSTPLYQTATFKQPSA--------TENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGM 80 (265)
Q Consensus 10 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~--------~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~ 80 (265)
.+..++-+...| ..+...+|++.+.+...+.. .....+.|++.+.+..+++++++++++|.++.+++++|+
T Consensus 10 ~t~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~i~~~sG~ 89 (398)
T 2rfv_A 10 NTQIVHAGQQPDPSTGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEAGLATASGI 89 (398)
T ss_dssp HHHHHHTTCCCCTTTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHH
T ss_pred ceeEeecCCcCccCCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCCcEEEECCHH
Confidence 445555442222 23455555555555333221 123457787777788999999999999999999999999
Q ss_pred HHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccHH
Q 024619 81 AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 159 (265)
Q Consensus 81 ~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~ 159 (265)
+|+. ++..++++||+|++++|.|+++...+...++..|.+++.++.+|++++++++.+++++|++++|+||||.+.|++
T Consensus 90 ~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~ 169 (398)
T 2rfv_A 90 SAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRPETKVVYIETPANPTLSLVDIE 169 (398)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEEESSBTTTTBCCCHH
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHH
Confidence 9986 677788999999999999999886665555778999999999999999999998999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCcCCCCCcCCCCCCccEEEeccccccccCCCcee-eEEEeechhHHHHHHHHHHhc-cCCCCh
Q 024619 160 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMA-GVLAVKGERLAKELYFLQNAE-GSGLAP 237 (265)
Q Consensus 160 ~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g~~~-G~v~~~~~~~~~~~~~~~~~~-~~~~~~ 237 (265)
+|.++|+++|+++|+|++|+.+....+...+.|+++.|+||++++| |.+. |+++.+++.+........... +...++
T Consensus 170 ~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~-g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (398)
T 2rfv_A 170 TVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGH-GDVIGGIIVGKQEFIDQARFVGLKDITGGCMSP 248 (398)
T ss_dssp HHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCS-SCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCH
T ss_pred HHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCC-CCceEEEEEECHHHHHHHHHHHHHhCCCCCCCH
Confidence 9999999999999999999988876666778999999999999665 4455 999988766543444444444 556777
Q ss_pred hHHHHHHhccCchHhhHHHHhhch
Q 024619 238 FDCWICLRGVKTMALRVEKQQVCF 261 (265)
Q Consensus 238 ~~~~~~~~~l~~~~~~~~~~~~~~ 261 (265)
..++...+.++.+..++++..++.
T Consensus 249 ~~~~~~~~~l~~~~~~~~~~~~~~ 272 (398)
T 2rfv_A 249 FNAWLTLRGVKTLGIRMERHCENA 272 (398)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHH
Confidence 778887788877655555554444
No 15
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.97 E-value=1.5e-29 Score=223.54 Aligned_cols=251 Identities=33% Similarity=0.501 Sum_probs=191.0
Q ss_pred ceeEeeccCCCCCCCCCCCCeeeccccccCCCC-------CCCCCccCCCCChhHHHHHHHHHhHhCCCceEEecchHHH
Q 024619 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSAT-------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAA 82 (265)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~~a 82 (265)
++..++-+...+..|...+|++++.++..+... ....+.|++.+++..+++++++++++|.++++++++|++|
T Consensus 4 ~t~~~~~~~~~~~~~~~~~pi~~s~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~~~~~~gt~a 83 (412)
T 2cb1_A 4 TTLAVLAGLPEDPHGAVGLPIYAVAAYGFKTLEEGQERFATGEGYVYARQKDPTAKALEERLKALEGALEAVVLASGQAA 83 (412)
T ss_dssp HHHHHHTTCCCCTTCCSSCCCCCCSBCCCSSHHHHHHHHHHCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHH
T ss_pred cceeeecCCCcCCCCCcCCCccccceeecCChHHHHHHhccccCcCcCCCCChHHHHHHHHHHHHhCCCcEEEECCHHHH
Confidence 344555553223478888999998766543310 1346788888888999999999999999988899999999
Q ss_pred HH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccHHHH
Q 024619 83 LA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKI 161 (265)
Q Consensus 83 l~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i 161 (265)
+. ++..++++||+|+++.|.|+++...+...++..|++++.++.+ ++++++++.+++++|++++|+||+|.+.|+++|
T Consensus 84 ~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i 162 (412)
T 2cb1_A 84 TFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPE-PEAVREALSAKTRAVFVETVANPALLVPDLEAL 162 (412)
T ss_dssp HHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECSS-HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-HHHHHHHhccCCeEEEEeCCCCCCcccccHHHH
Confidence 86 6677789999999999999887766655578889999999875 999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEEeCCcCCC-CCcCCCCCCccEEEeccccccccCCCceeeEEEeech----------------------
Q 024619 162 AEMAHAHGALLLVDNSIMSP-VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE---------------------- 218 (265)
Q Consensus 162 ~~~a~~~~~~li~D~~~~~~-~~~~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~---------------------- 218 (265)
.++|+++|+++|+|++|+.+ ....+...+.|+++.|++|++++|++..+|+++.++.
T Consensus 163 ~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 242 (412)
T 2cb1_A 163 ATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEA 242 (412)
T ss_dssp HHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHH
T ss_pred HHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhc
Confidence 99999999999999999987 4455666789999999999997765533555554433
Q ss_pred ----hHHHHHHHHH-HhccCCCChhHHHHHHhccCchHhhHHHHhhch
Q 024619 219 ----RLAKELYFLQ-NAEGSGLAPFDCWICLRGVKTMALRVEKQQVCF 261 (265)
Q Consensus 219 ----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 261 (265)
.+....+... ...+..+++..++..+..++.+..+.++..++.
T Consensus 243 ~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~~~~~~~~~~ 290 (412)
T 2cb1_A 243 LRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLETVALRVARMSETA 290 (412)
T ss_dssp HGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGGHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCchHHHHHHHHHHHH
Confidence 1222222221 223345677778888888887765555444433
No 16
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.97 E-value=2e-29 Score=223.36 Aligned_cols=254 Identities=33% Similarity=0.466 Sum_probs=197.7
Q ss_pred ceeEeeccCCCC-CCCCCCCCeeeccccccCCC--------CCCCCCccCCCCChhHHHHHHHHHhHhCCCceEEecchH
Q 024619 10 STLLMNFSNEFD-PYGALSTPLYQTATFKQPSA--------TENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGM 80 (265)
Q Consensus 10 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~--------~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~ 80 (265)
++..++-+...+ ..|...+|++++.++..+.. .....+.|++.+++..+++++.+++++|.++.+++++|+
T Consensus 4 ~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~v~~~sGt 83 (421)
T 2ctz_A 4 ETLQLHAGYEPEPTTLSRQVPIYPTTSYVFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGGKAALATASGH 83 (421)
T ss_dssp HHHHHHTTCCCCTTTCBSSCCBCCCSCBCCSCHHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHHTCSEEEEESSHH
T ss_pred ceeeeeCCCCCCcCCCCccCCeeccceeeeCCHHHHHHhhccccCCCcccCCCChHHHHHHHHHHHHhCCCceEEecCHH
Confidence 344555553223 47899999999998765442 123467788888889999999999999998889999999
Q ss_pred HHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEee-cCCCHHHHHhhcCCCceEEEEecCCCCccccccH
Q 024619 81 AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV-NTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (265)
Q Consensus 81 ~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l 158 (265)
+|+. ++..++++||+|+++.+.|+++...+...++..|++++.+ +.+|++++++++.+++++|++++++||+|.+.|+
T Consensus 84 ~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l 163 (421)
T 2ctz_A 84 AAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEKTRAWWVESIGNPALNIPDL 163 (421)
T ss_dssp HHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhccCCeEEEEECCCCCCCcccCH
Confidence 9986 6667789999999999999998877655557789999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcCCCCCCccEEEeccccccccCCCceeeEEEeech-hH----HHHH--------
Q 024619 159 RKIAEMAHAHGALLLVDNSI-MSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-RL----AKEL-------- 224 (265)
Q Consensus 159 ~~i~~~a~~~~~~li~D~~~-~~~~~~~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~-~~----~~~~-------- 224 (265)
++|.++|+++|+++|+|++| +.+....+...+.|+++.|++|++++|++..+|+++.+++ .+ ...+
T Consensus 164 ~~i~~~a~~~g~~livD~~~~~~g~~~~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~ 243 (421)
T 2ctz_A 164 EALAQAAREKGVALIVDNTFGMGGYLLRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYH 243 (421)
T ss_dssp HHHHHHHHHHTCEEEEECGGGGGGTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGT
T ss_pred HHHHHHHHHcCCEEEEECCcccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhh
Confidence 99999999999999999999 8776556667789999999999997654333455554221 11 0000
Q ss_pred --------------HH----HHHhccCCCChhHHHHHHhccCchHhhHHHHhhchhc
Q 024619 225 --------------YF----LQNAEGSGLAPFDCWICLRGVKTMALRVEKQQVCFFD 263 (265)
Q Consensus 225 --------------~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 263 (265)
.. .....+..+++..++..+++++.+..+.+++.+++..
T Consensus 244 g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~ 300 (421)
T 2ctz_A 244 GLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSLRAERHVENTLH 300 (421)
T ss_dssp TBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred hhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHHHHHHHHHHhHHH
Confidence 00 0122455788888899889999887666666665544
No 17
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.96 E-value=1.8e-27 Score=209.53 Aligned_cols=209 Identities=20% Similarity=0.223 Sum_probs=168.2
Q ss_pred hhHHHHHHHHHhHhCCCceEE---ecchHHHHH-HHHHhcCCCCEEEEcC-CCCCChHHHHH------hhcCCCCeEEEe
Q 024619 55 PTRDALESLLAKLDKADRALC---FTSGMAALA-AVTHLLGTGEEIVAGD-DLYGGTDRLLS------RVTPKTGVVVKR 123 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~---~~~g~~al~-~~~~~~~~g~~viv~~-~~~~~~~~~~~------~~~~~~g~~~~~ 123 (265)
+.++++++.+++++|.+..++ +++|++|+. ++..++++||+|++++ +.|+.+...+. ..++..|+++++
T Consensus 59 ~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~ 138 (409)
T 3jzl_A 59 EGRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSS 138 (409)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEE
T ss_pred hHHHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEE
Confidence 348999999999999998888 789999986 7778899999999998 99998875442 355678999999
Q ss_pred ecC-----CCHHHHHhhcCCCceEEEEec----CCCCccccccHHHHHHHHHH--cCCEEEEeCCcCCCCC-cCCCCCCc
Q 024619 124 VNT-----CDLDEVASAIGPWTKLVWVES----PTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPVL-SRPLELGA 191 (265)
Q Consensus 124 ~~~-----~d~~~l~~~~~~~~~~i~~~~----~~np~G~~~~l~~i~~~a~~--~~~~li~D~~~~~~~~-~~~~~~~~ 191 (265)
++. .|++++++++++++++|++++ |+||+|.+.|+++|+++|++ +|+++++|++|+.+.. ..+...+.
T Consensus 139 v~~~~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~~g~ 218 (409)
T 3jzl_A 139 VPLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEVGA 218 (409)
T ss_dssp CCCCTTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGGGTC
T ss_pred eCCCCCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccccCCccccCC
Confidence 998 699999999999999999999 99999999999999999999 9999999999998873 46777889
Q ss_pred cEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHh--cc--CCCChhHHHHHHhccCchHhhHHHHhhchhcc
Q 024619 192 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--EG--SGLAPFDCWICLRGVKTMALRVEKQQVCFFDL 264 (265)
Q Consensus 192 di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l 264 (265)
|++++|++|+++|+...++|+++++++.+ +.+...... .+ ........+.+++.++.+..+++++.+|+..+
T Consensus 219 Div~~S~sK~lgg~~~~~GG~v~~~~~li-~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~~~~r~~~~~~~a~~l 294 (409)
T 3jzl_A 219 DIIAGSLIKNPGGGLAKTGGYIAGKEALV-DLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARFT 294 (409)
T ss_dssp SEEEEETTSGGGTTTCSSCEEEEECHHHH-HHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEECccccCCccCCceEEEEEeCHHHH-HHHHHHhccccccccccccHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 99999999999765445679998876544 434333221 11 22222235667888888888888888776543
No 18
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.95 E-value=1.4e-27 Score=210.95 Aligned_cols=208 Identities=20% Similarity=0.252 Sum_probs=169.8
Q ss_pred hHHHHHHHHHhHhCCCceEE---ecchHHHHH-HHHHhcCCCCEEEEcC-CCCCChHHHH-------HhhcCCCCeEEEe
Q 024619 56 TRDALESLLAKLDKADRALC---FTSGMAALA-AVTHLLGTGEEIVAGD-DLYGGTDRLL-------SRVTPKTGVVVKR 123 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~---~~~g~~al~-~~~~~~~~g~~viv~~-~~~~~~~~~~-------~~~~~~~g~~~~~ 123 (265)
.++++++.+++++|.+..++ +++|++|+. ++.+++++||+|++++ +.|+.+...+ ...++..|++++.
T Consensus 74 ~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~ 153 (427)
T 3i16_A 74 GRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQ 153 (427)
T ss_dssp HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEE
T ss_pred HHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEE
Confidence 48999999999999998888 899999986 7788999999999998 9998886554 1445667999999
Q ss_pred ecC-----CCHHHHHhhcC--CCceEEEEec----CCCCccccccHHHHHHHHHH--cCCEEEEeCCcCCCC-CcCCCCC
Q 024619 124 VNT-----CDLDEVASAIG--PWTKLVWVES----PTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPV-LSRPLEL 189 (265)
Q Consensus 124 ~~~-----~d~~~l~~~~~--~~~~~i~~~~----~~np~G~~~~l~~i~~~a~~--~~~~li~D~~~~~~~-~~~~~~~ 189 (265)
++. .|+++++++++ +++++|++++ |+||+|.+.|+++|+++|++ +|+++++|++|+.+. ...+...
T Consensus 154 v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~~ 233 (427)
T 3i16_A 154 VDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTDV 233 (427)
T ss_dssp CCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGGG
T ss_pred ecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCCcccc
Confidence 997 58999999998 7899999999 99999999999999999999 999999999999887 4567778
Q ss_pred CccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHH--hccCCCCh-hH-HHHHHhccCchHhhHHHHhhchhcc
Q 024619 190 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAP-FD-CWICLRGVKTMALRVEKQQVCFFDL 264 (265)
Q Consensus 190 ~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~--~~~~~~~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~l 264 (265)
+.|++++|+||+++++...++|+++++++.+ +.+..... ..+..+.+ .. ++.+++.++.+..+++++.+|+..+
T Consensus 234 gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li-~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~~~~~r~~~~~~~a~~l 311 (427)
T 3i16_A 234 GADLIAGSLIKNIGGGIAPTGGYLAGTKDCI-EKTSYRLTVPGIGGECGSTFGVVRSMYQGLFLAPHISMEALKGAILC 311 (427)
T ss_dssp TCSEEEEETTSGGGTTTCCSCEEEEECHHHH-HHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEecCcccCCCCCCceEEEEEECHHHH-HHHHHhcccCccCccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999664435689998876554 43333222 22223333 33 7888999998888888888887643
No 19
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.95 E-value=4.6e-28 Score=207.51 Aligned_cols=192 Identities=35% Similarity=0.593 Sum_probs=154.8
Q ss_pred HHHHHHHhHhCCCceEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC
Q 024619 59 ALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 59 ~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~ 137 (265)
++++.+++++|.++.+++++|++|+. ++..++++||+|++++|+|+++...+...++..|.+++.++..|+++++++++
T Consensus 2 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~ 81 (331)
T 1pff_A 2 ALEGKIAKLEHAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLK 81 (331)
T ss_dssp HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCC
T ss_pred hHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhc
Confidence 68899999999999999999999986 66667899999999999999987665443456799999999999999999999
Q ss_pred CCceEEEEecCCCCccccccHHHHHHHHHH-cCCEEEEeCCcCCCCCcCCCCCCccEEEeccccccccCCCce-eeEEEe
Q 024619 138 PWTKLVWVESPTNPRQQICDIRKIAEMAHA-HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM-AGVLAV 215 (265)
Q Consensus 138 ~~~~~i~~~~~~np~G~~~~l~~i~~~a~~-~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g~~-~G~v~~ 215 (265)
+++++|++++|+||||.+.|+++|.++|++ +|+++|+|++|+.+....+...+.|++++|+||++++| |.+ +|+++.
T Consensus 82 ~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~~~-~~r~~G~~~~ 160 (331)
T 1pff_A 82 PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPLDLGVDIVVHSATKYINGH-TDVVAGLVCS 160 (331)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTSSS-SSCCCEEEEE
T ss_pred CCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChhhcCCcEEEEECccccCCC-CCceEEEEEe
Confidence 899999999999999999999999999999 99999999999977665555678999999999999665 455 789988
Q ss_pred echhHHHHHHHHHHh-ccCCCChhHHHHHHhccCchH
Q 024619 216 KGERLAKELYFLQNA-EGSGLAPFDCWICLRGVKTMA 251 (265)
Q Consensus 216 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~ 251 (265)
+++.+.+.+...... .+...++..++...+.++.+.
T Consensus 161 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 197 (331)
T 1pff_A 161 RADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLD 197 (331)
T ss_dssp CHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchHH
Confidence 773444433333333 344566666665555555443
No 20
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.95 E-value=2.1e-27 Score=209.78 Aligned_cols=215 Identities=21% Similarity=0.236 Sum_probs=172.0
Q ss_pred CCccCCCCChhHHHHHHHHHhHhCCCceEE---ecchHHHHH-HHHHhcCCCCEEEEcC-CCCCChHHHHH-------hh
Q 024619 46 PYDYTRSGNPTRDALESLLAKLDKADRALC---FTSGMAALA-AVTHLLGTGEEIVAGD-DLYGGTDRLLS-------RV 113 (265)
Q Consensus 46 ~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~---~~~g~~al~-~~~~~~~~g~~viv~~-~~~~~~~~~~~-------~~ 113 (265)
.+.|++. .++++++.+++++|++..++ ++||++|+. ++.++++|||+|++++ +.|+.+...+. ..
T Consensus 68 gy~Y~~~---g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~ 144 (427)
T 3hvy_A 68 GYGYNDI---GRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGS 144 (427)
T ss_dssp TTCTTCH---HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCC
T ss_pred CCCCCch---hHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhH
Confidence 3445444 48999999999999998888 799999986 7788999999999998 99988864441 34
Q ss_pred cCCCCeEEEeecC----CCHHHHHhhcC--CCceEEEEec----CCCCccccccHHHHHHHHHH--cCCEEEEeCCcCCC
Q 024619 114 TPKTGVVVKRVNT----CDLDEVASAIG--PWTKLVWVES----PTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSP 181 (265)
Q Consensus 114 ~~~~g~~~~~~~~----~d~~~l~~~~~--~~~~~i~~~~----~~np~G~~~~l~~i~~~a~~--~~~~li~D~~~~~~ 181 (265)
++..|++++.++. .|+++++++++ +++++|++++ |+||+|.+.|+++|+++|++ +|+++++|++|+.+
T Consensus 145 l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~ 224 (427)
T 3hvy_A 145 LREYGVKYKMVDLKDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEF 224 (427)
T ss_dssp TGGGTCEEEECCCBTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTT
T ss_pred HHHcCCEEEEecCCCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCcccc
Confidence 5668999999998 79999999998 8899999999 99999999999999999999 89999999999988
Q ss_pred C-CcCCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHH--hccC--CCChhHHHHHHhccCchHhhHHH
Q 024619 182 V-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGS--GLAPFDCWICLRGVKTMALRVEK 256 (265)
Q Consensus 182 ~-~~~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~l~~~~~~~~~ 256 (265)
. ...+...+.|++++|+||+++|+...++|+++++++.+ +.+..... ..+. ..+...++.+++.++.+..++++
T Consensus 225 ~~~~~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li-~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~~~r~~~ 303 (427)
T 3hvy_A 225 VEEKEPTDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYV-TQATFRVTVPGIGGECGSTFGVMRSLYEGLFMAPHVTIE 303 (427)
T ss_dssp TSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHH-HHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcccCCeEEEECCcccccccccceEEEEEECHHHH-HHHHHHhhcCCcccccCCCHHHHHHHHHhHhHHHHHHHH
Confidence 7 45677788999999999999764335679998876544 43443322 1221 12233478888899888888888
Q ss_pred Hhhchhcc
Q 024619 257 QQVCFFDL 264 (265)
Q Consensus 257 ~~~~~~~l 264 (265)
+.+|+..+
T Consensus 304 ~~~~a~~l 311 (427)
T 3hvy_A 304 AVKGAVFC 311 (427)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877643
No 21
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.95 E-value=5.9e-27 Score=205.14 Aligned_cols=230 Identities=16% Similarity=0.153 Sum_probs=167.7
Q ss_pred ceeEeeccCCCCCCCCCCCCeeeccccccCCCCCC--CCCccCCCCC-hhHHHHHHHHHhHhCCCceEEecchHHHHH-H
Q 024619 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATEN--GPYDYTRSGN-PTRDALESLLAKLDKADRALCFTSGMAALA-A 85 (265)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~y~~~g~-~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~ 85 (265)
+..+++|+ +++++|..++|.+............. ....|. .|. +..+++++.+++++|.++.+++++|++++. +
T Consensus 42 g~~~id~~-~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~-~g~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~ 119 (399)
T 3tqx_A 42 EKEVLNFC-ANNYLGLADHPALIKTAQTVVEQYGFGMASVRFI-CGTQTIHKELEKDISEFLGTDDTILYSSCFDANGGL 119 (399)
T ss_dssp TEEEEECS-SCCTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCC-CCCBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTT
T ss_pred CeeEEEee-ccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcc-ccCchHHHHHHHHHHHHHCCCcEEEECchHHHHHHH
Confidence 35789999 77888865555554433221110111 111121 233 569999999999999999999999998886 7
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC------CceEEEEecCCCCccccccHH
Q 024619 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP------WTKLVWVESPTNPRQQICDIR 159 (265)
Q Consensus 86 ~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~~~np~G~~~~l~ 159 (265)
+..++++||.|+++.|+|+++. ..++..|.+++.++..|++++++.+.+ ++++|++++++||||.+.|++
T Consensus 120 l~~~~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~ 195 (399)
T 3tqx_A 120 FETLLGPEDAIISDELNHASII----DGIRLCKAQRYRYKNNAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLK 195 (399)
T ss_dssp HHHHCCTTCEEEEETTCCHHHH----HHHHSCCSEEEEECTTCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHH
T ss_pred HHHhcCCCCEEEECCcccHHHH----HHHHHcCCceeEeCCCCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHH
Confidence 7788999999999999999886 455678999999998899999888864 899999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCcCCCCCcCC----C-----CCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHH-
Q 024619 160 KIAEMAHAHGALLLVDNSIMSPVLSRP----L-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN- 229 (265)
Q Consensus 160 ~i~~~a~~~~~~li~D~~~~~~~~~~~----~-----~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~- 229 (265)
+|.++|+++|+++|+||+|+.+..... . ..+.|++++|+||+++|++ +|+++.+++.+.........
T Consensus 196 ~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~---gG~~~~~~~~~~~~~~~~~~~ 272 (399)
T 3tqx_A 196 SICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGAS---GGYTSGHKEIIEWLRNRSRPY 272 (399)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSC---CEEEEECHHHHHHHHHHCHHH
T ss_pred HHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCc---eEEEEcCHHHHHHHHHhCcce
Confidence 999999999999999999986654321 1 2267999999999996454 59998877554333222121
Q ss_pred hccCCCChhHHHHHHhccC
Q 024619 230 AEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 230 ~~~~~~~~~~~~~~~~~l~ 248 (265)
......++...+.+...++
T Consensus 273 ~~~~~~~~~~~~~~~~~l~ 291 (399)
T 3tqx_A 273 LFSNTVAPVIVATSLKVLE 291 (399)
T ss_dssp HSSCCCCHHHHHHHHHHHH
T ss_pred eccCCCcHHHHHHHHHHHH
Confidence 2333555555444443333
No 22
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.95 E-value=2.4e-27 Score=208.25 Aligned_cols=228 Identities=19% Similarity=0.142 Sum_probs=167.6
Q ss_pred eEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCC-----CceEEecchHHHHH
Q 024619 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA-----DRALCFTSGMAALA 84 (265)
Q Consensus 12 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~-----~~~i~~~~g~~al~ 84 (265)
.+|+|+ ++++.+..++|.+..+..... .....+.|.+. |.+ .++++++++++++|. +.++++++|++++.
T Consensus 40 ~~id~~-~g~~~~~~~~~~v~~a~~~~~--~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~ 116 (407)
T 3nra_A 40 RPVDFS-HGDVDAHEPTPGAFDLFSAGV--QSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALF 116 (407)
T ss_dssp CCEETT-SCCTTTSCCCTTHHHHHHHHH--HHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred ceeeec-CcCCCCCCCcHHHHHHHHHHH--hcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence 589999 878876555555444322111 11123357665 665 599999999999986 45666666679986
Q ss_pred -HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC-----------CCHHHHHhhcCCCceEEEEecCCCCc
Q 024619 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----------CDLDEVASAIGPWTKLVWVESPTNPR 152 (265)
Q Consensus 85 -~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----------~d~~~l~~~~~~~~~~i~~~~~~np~ 152 (265)
++..++++||+|+++.|+|+++. ..++..|.+++.++. .|++++++++.+++++|++++|+|||
T Consensus 117 ~~~~~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~npt 192 (407)
T 3nra_A 117 LAVAATVARGDKVAIVQPDYFANR----KLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPA 192 (407)
T ss_dssp HHHHTTCCTTCEEEEEESCCTHHH----HHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTT
T ss_pred HHHHHhCCCCCEEEEcCCcccchH----HHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCC
Confidence 66778899999999999999887 444667888888876 28999999998889999999999999
Q ss_pred ccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc-----CC-----CCCCccEEEeccccccccCCCceeeEEEeechh
Q 024619 153 QQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGER 219 (265)
Q Consensus 153 G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~-----~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~ 219 (265)
|.+.+ +++|+++|++||+++|+||+|+.+.+. .. ...+.++++.|+||++ |.+|+++|+++.+++
T Consensus 193 G~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~- 270 (407)
T 3nra_A 193 GVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTE-SLSGYRLGVAFGSRA- 270 (407)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTT-CCGGGCCEEEEECHH-
T ss_pred CcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCccccc-CCCeeeEEEEEcCHH-
Confidence 99988 899999999999999999999864432 11 1245679999999999 667889999988664
Q ss_pred HHHHHHHHHHhccCCCChhHHHHHHhccC
Q 024619 220 LAKELYFLQNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (265)
+.+.+...........++..+..+...++
T Consensus 271 ~~~~l~~~~~~~~~~~~~~~~~a~~~~l~ 299 (407)
T 3nra_A 271 IIARMEKLQAIVSLRAAGYSQAVLRGWFD 299 (407)
T ss_dssp HHHHHHHHHHHHTSSSCHHHHGGGGGTTC
T ss_pred HHHHHHHHHhhhccCCChHHHHHHHHHHh
Confidence 44444444444444555555544444444
No 23
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.95 E-value=6.7e-27 Score=207.32 Aligned_cols=225 Identities=17% Similarity=0.190 Sum_probs=165.6
Q ss_pred ceeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CC-hhHHHHHHHHHhHhCCCceEEecchHHHHH-HH
Q 024619 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GN-PTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (265)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~-~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~ 86 (265)
+..+|+|+ +++|+|..++|.+.................|... |. +...++++.+++++|.++.+++++|++|+. ++
T Consensus 63 g~~~id~~-~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~al 141 (427)
T 2w8t_A 63 GKDTILLG-TYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGTTGAIVFSTGYMANLGII 141 (427)
T ss_dssp TEEEEECS-CCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHH
T ss_pred CceEEEEE-CcccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCCCceEEecCcHHHHHHHH
Confidence 46789999 8888886566655443322111111111122222 54 568999999999999999999999998875 67
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC----CceEEEEecCCCCccccccHHHHH
Q 024619 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP----WTKLVWVESPTNPRQQICDIRKIA 162 (265)
Q Consensus 87 ~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~----~~~~i~~~~~~np~G~~~~l~~i~ 162 (265)
..++++||.|+++.|.|+++...+ +..|.+++.++..|++++++.+.+ ++++|++++++||+|.+.|+++|.
T Consensus 142 ~~l~~~gd~vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~ 217 (427)
T 2w8t_A 142 STLAGKGEYVILDADSHASIYDGC----QQGNAEIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMV 217 (427)
T ss_dssp HHHSCTTCEEEEETTCCHHHHHHH----HHSCSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHHHHH
T ss_pred HHhcCCCCEEEECCcccHHHHHHH----HHcCCeeEEeCCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHH
Confidence 778899999999999999887443 456889999999999999998864 789999999999999999999999
Q ss_pred HHHHHcCCEEEEeCCcCCCCCc---------CCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHH-HHHhcc
Q 024619 163 EMAHAHGALLLVDNSIMSPVLS---------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-LQNAEG 232 (265)
Q Consensus 163 ~~a~~~~~~li~D~~~~~~~~~---------~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~-~~~~~~ 232 (265)
++|+++|+++|+||+|+.+.++ .....+.|++++|+||+++ ++ +|+++++++.+...... ......
T Consensus 218 ~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g-~~---gG~v~~~~~l~~~l~~~~~~~~~~ 293 (427)
T 2w8t_A 218 AVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVG-TV---GGFVVSNHPKFEAVRLACRPYIFT 293 (427)
T ss_dssp HHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC-SC---CEEEEECCTTGGGGGGTCHHHHSS
T ss_pred HHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhc-cC---CCEEEeCHHHHHHHHHhccccccc
Confidence 9999999999999999977654 1122357999999999994 55 48998877544332211 112233
Q ss_pred CCCChhHHHHH
Q 024619 233 SGLAPFDCWIC 243 (265)
Q Consensus 233 ~~~~~~~~~~~ 243 (265)
...++.....+
T Consensus 294 ~~~~~~~~aa~ 304 (427)
T 2w8t_A 294 ASLPPSVVATA 304 (427)
T ss_dssp CCCCHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 44555554443
No 24
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.95 E-value=2.3e-26 Score=201.11 Aligned_cols=195 Identities=22% Similarity=0.307 Sum_probs=147.7
Q ss_pred CccCCC-CCh-hHHHHHHHHHhHhCC----CceEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCe
Q 024619 47 YDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (265)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~ 119 (265)
..|++. |.+ +++++++++.+.+|. ++++++++|++++. ++..++++||+|+++.|+|+.+.. .++..|.
T Consensus 62 ~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~ 137 (385)
T 1b5p_A 62 TKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPE----MVRFAGG 137 (385)
T ss_dssp CSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH----HHHHTTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCC
Confidence 467665 665 589999999887774 24455555569986 677789999999999999998874 4456788
Q ss_pred EEEeecCC-------CHHHHHhhcCCCceEEEEecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc----C
Q 024619 120 VVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----R 185 (265)
Q Consensus 120 ~~~~~~~~-------d~~~l~~~~~~~~~~i~~~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~----~ 185 (265)
+++.++.+ |++++++++.+++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|+...+. .
T Consensus 138 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 217 (385)
T 1b5p_A 138 VVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFS 217 (385)
T ss_dssp EEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCC
T ss_pred EEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCC
Confidence 98888863 789999999888999999999999999965 899999999999999999999865442 1
Q ss_pred CCCC--CccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHHHhcc
Q 024619 186 PLEL--GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV 247 (265)
Q Consensus 186 ~~~~--~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 247 (265)
.... +.+++++|+||++ |++|+|+|+++++++ +.+.+...+.......+...+..+.+.+
T Consensus 218 ~~~~~~~~~i~~~s~SK~~-~~~G~RiG~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l 279 (385)
T 1b5p_A 218 PGRVAPEHTLTVNGAAKAF-AMTGWRIGYACGPKE-VIKAMASVSRQSTTSPDTIAQWATLEAL 279 (385)
T ss_dssp GGGTCTTTEEEEEESTTTT-TCGGGCCEEEECCHH-HHHHHHHHHHTTTCSCCHHHHHHHHHHH
T ss_pred HHHcCCCCEEEEEechhhc-CCcccceEEEEeCHH-HHHHHHHHHhhccCCCCHHHHHHHHHHH
Confidence 1222 5789999999999 667899999998764 4444444444444455555544443333
No 25
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.94 E-value=2e-26 Score=202.07 Aligned_cols=202 Identities=14% Similarity=0.169 Sum_probs=155.1
Q ss_pred ceeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CC-hhHHHHHHHHHhHhCCCceEEecchHHHHH-HH
Q 024619 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GN-PTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (265)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~-~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~ 86 (265)
+..+++|+ +++++|..++|.+.................|... |. +.++++++++++++|.++++++++|++|+. ++
T Consensus 42 g~~~idl~-~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~v~~~~ggt~a~~~~~ 120 (398)
T 3a2b_A 42 GRRVLMFG-SNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGKEAAILFSTGFQSNLGPL 120 (398)
T ss_dssp TEEEEECS-CSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHH
T ss_pred CceEEEee-cccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHH
Confidence 35689999 6666666455554443322111111122234443 55 569999999999999988888888889986 67
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC----CceEEEEecCCCCccccccHHHHH
Q 024619 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP----WTKLVWVESPTNPRQQICDIRKIA 162 (265)
Q Consensus 87 ~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~----~~~~i~~~~~~np~G~~~~l~~i~ 162 (265)
..++++||.|++++|.|+.+.. .++..|.+++.++..|++++++.+.+ ++++|++++++||||.+.++++|.
T Consensus 121 ~~~~~~gd~V~~~~p~~~~~~~----~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~ 196 (398)
T 3a2b_A 121 SCLMGRNDYILLDERDHASIID----GSRLSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELT 196 (398)
T ss_dssp HHSSCTTCEEEEETTCCHHHHH----HHHHSSSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHH
T ss_pred HHHhCCCCEEEECCccCHHHHH----HHHHcCCceEEeCCCCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHH
Confidence 7788999999999999998874 34567899999999999999998865 789999999999999999999999
Q ss_pred HHHHHcCCEEEEeCCcCCCCCc---CCC-C-----CCccEEEeccccccccCCCceeeEEEeechhH
Q 024619 163 EMAHAHGALLLVDNSIMSPVLS---RPL-E-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 163 ~~a~~~~~~li~D~~~~~~~~~---~~~-~-----~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
++|+++|+++|+||+|+.+.+. ... . .+.|++++|+||++ +++| |+++++++.+
T Consensus 197 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~-~~~G---G~~~~~~~~~ 259 (398)
T 3a2b_A 197 SIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSL-ASLG---GFVAGDADVI 259 (398)
T ss_dssp HHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTT-CSSC---EEEEECHHHH
T ss_pred HHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccc-cCCC---cEEEeCHHHH
Confidence 9999999999999999877542 111 1 12589999999999 5665 8888876544
No 26
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.94 E-value=4.9e-26 Score=198.76 Aligned_cols=223 Identities=13% Similarity=0.134 Sum_probs=159.7
Q ss_pred ceeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhC--C--CceEEecchHHHHH-
Q 024619 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--A--DRALCFTSGMAALA- 84 (265)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g--~--~~~i~~~~g~~al~- 84 (265)
+..+|+|+ ..+...+.++.+..+...... ...+.|++.....++++++++++.+| . +.++++++|++++.
T Consensus 26 g~~~i~~~-~~~~~~~~~~~v~~a~~~~~~----~~~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~ 100 (391)
T 3dzz_A 26 KEKELPMW-IAEMDFKIAPEIMASMEEKLK----VAAFGYESVPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISA 100 (391)
T ss_dssp CTTCEECC-SSCCSSCCCHHHHHHHHHHHT----TCCCCCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHH
T ss_pred CCCceecc-ccCCCCCCCHHHHHHHHHHHh----cCcCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHH
Confidence 34789998 444433333333333321111 13456666533569999999999987 3 24555555579986
Q ss_pred HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC--------CCHHHHHhhcC-CCceEEEEecCCCCcccc
Q 024619 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIG-PWTKLVWVESPTNPRQQI 155 (265)
Q Consensus 85 ~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~d~~~l~~~~~-~~~~~i~~~~~~np~G~~ 155 (265)
++..++++||+|+++.|+|+++.. .++..|.+++.++. .|++++++++. +++++|++++|+||||.+
T Consensus 101 ~~~~l~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~ 176 (391)
T 3dzz_A 101 MVRQFTSPGDQILVQEPVYNMFYS----VIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYA 176 (391)
T ss_dssp HHHHHSCTTCEEEECSSCCHHHHH----HHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBC
T ss_pred HHHHhCCCCCeEEECCCCcHHHHH----HHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcc
Confidence 777788999999999999998874 44567899999887 58999999997 789999999999999999
Q ss_pred ---ccHHHHHHHHHHcCCEEEEeCCcCCCCCc-----CCCCCC---cc--EEEeccccccccCCCceeeEEEeechhHHH
Q 024619 156 ---CDIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELG---AD--IVMHSATKFIAGHSDVMAGVLAVKGERLAK 222 (265)
Q Consensus 156 ---~~l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~~~~~---~d--i~~~s~sK~~~g~~g~~~G~v~~~~~~~~~ 222 (265)
.++++|+++|++||+++|+||+|+...+. .....+ .| +++.|+||++ |++|+++|+++++++.+.+
T Consensus 177 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~-g~~G~r~G~~~~~~~~~~~ 255 (391)
T 3dzz_A 177 WSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTF-NLAALHAACAIIPNPDLRA 255 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHH-TCTTTCCEEEECCSHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhc-cccchhheEEEECCHHHHH
Confidence 57899999999999999999999854432 111211 34 9999999999 6678899999988555555
Q ss_pred HHHHHHH-hccCCCChhHHHH
Q 024619 223 ELYFLQN-AEGSGLAPFDCWI 242 (265)
Q Consensus 223 ~~~~~~~-~~~~~~~~~~~~~ 242 (265)
.+..... ......++.....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~a 276 (391)
T 3dzz_A 256 RAEESFFLAGIGEPNLLAIPA 276 (391)
T ss_dssp HHHHHHHHHTCSSCCTTHHHH
T ss_pred HHHHHHHhhccCCCCHHHHHH
Confidence 5544433 2333445444333
No 27
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.94 E-value=1.3e-26 Score=204.11 Aligned_cols=204 Identities=16% Similarity=0.072 Sum_probs=159.3
Q ss_pred cceeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CC-hhHHHHHHHHHhHhCCCceEEecchHHHHH-H
Q 024619 9 VSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GN-PTRDALESLLAKLDKADRALCFTSGMAALA-A 85 (265)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~-~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~ 85 (265)
.+.++++|+ +|+|+|..++|.+.................|... |. +..+++++++++++|.+..+++++|++++. +
T Consensus 57 ~g~~~ld~~-s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~ 135 (409)
T 3kki_A 57 ASPDDIILQ-SNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDECLLSQSGWNANVGL 135 (409)
T ss_dssp CCTTSEECC-CSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCSEEEEESCHHHHHHHH
T ss_pred CCCceEEee-ccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCCeEEEecchHHHHHHH
Confidence 346799999 8999998777766554322211111112222222 44 457889999999999998999999998875 7
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC-CceEEEEecCCCCccccccHHHHHHH
Q 024619 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEM 164 (265)
Q Consensus 86 ~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~ 164 (265)
+..++++||.|++++|.|+++... ++..|.+++.++..|++++++++.+ ++++|++++++||||.+.++++|.++
T Consensus 136 l~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~l 211 (409)
T 3kki_A 136 LQTICQPNTNVYIDFFAHMSLWEG----ARYANAQAHPFMHNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNI 211 (409)
T ss_dssp HHHHCCTTCEEEEETTSCHHHHHH----HHHTTCEEEEECTTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHH
T ss_pred HHHhcCCCCEEEECCCcCHHHHHH----HHHcCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHH
Confidence 788899999999999999988743 3556889999998999999999874 58999999999999999999999999
Q ss_pred HHHcCCEEEEeCCcCCCCCcC---------CCCCCccEEEeccccccccCCCceeeEEEeechhHH
Q 024619 165 AHAHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 221 (265)
Q Consensus 165 a~~~~~~li~D~~~~~~~~~~---------~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~ 221 (265)
|++||+++|+||+|+.+.++. ....+.|+++.|+||++++ + +|+++.+++.+.
T Consensus 212 a~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~-~---gg~v~~~~~~~~ 273 (409)
T 3kki_A 212 SKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAY-R---AGAIWCNNEVNR 273 (409)
T ss_dssp HHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCS-S---CEEEEESSSGGG
T ss_pred HHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCC-C---ceEEEECHHHHH
Confidence 999999999999998765531 1123578999999999954 3 488888776543
No 28
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.94 E-value=1.4e-25 Score=194.89 Aligned_cols=225 Identities=17% Similarity=0.247 Sum_probs=164.4
Q ss_pred eeEeeccCCCCC-CCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCC----CceEEecchHHHH
Q 024619 11 TLLMNFSNEFDP-YGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAAL 83 (265)
Q Consensus 11 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~g~~al 83 (265)
..+++|+ .+.+ ++. +|.+........ ......|+.. |.+ +++++++++.+.+|. ++++++++|++++
T Consensus 29 ~~~i~l~-~~~~~~~~--~~~v~~a~~~~~---~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~ 102 (370)
T 2z61_A 29 KKVIHLE-IGEPDFNT--PKPIVDEGIKSL---KEGKTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGL 102 (370)
T ss_dssp CCCEECC-CCSCSSCC--CHHHHHHHHHHH---HTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHH
T ss_pred CCEEEcc-CCCCCCCC--CHHHHHHHHHHH---HcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHH
Confidence 4578998 4443 332 333332221111 1123467665 564 588888888776552 3566666677998
Q ss_pred H-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccHHHHH
Q 024619 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 162 (265)
Q Consensus 84 ~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~ 162 (265)
. ++..++++||+|++++|+|+++... ++..|.+++.++ .|++++++++.+++++|++++|+||||.+.+++ |.
T Consensus 103 ~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~v~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~-l~ 176 (370)
T 2z61_A 103 FFALSSIIDDGDEVLIQNPCYPCYKNF----IRFLGAKPVFCD-FTVESLEEALSDKTKAIIINSPSNPLGEVIDRE-IY 176 (370)
T ss_dssp HHHHHHHCCTTCEEEEESSCCTHHHHH----HHHTTCEEEEEC-SSHHHHHHHCCSSEEEEEEESSCTTTCCCCCHH-HH
T ss_pred HHHHHHhcCCCCEEEEeCCCchhHHHH----HHHcCCEEEEeC-CCHHHHHHhcccCceEEEEcCCCCCcCcccCHH-HH
Confidence 6 6677889999999999999998744 456788999998 789999999988899999999999999999999 99
Q ss_pred HHHHHcCCEEEEeCCcCCCCCc----CCC----CCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCC
Q 024619 163 EMAHAHGALLLVDNSIMSPVLS----RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 234 (265)
Q Consensus 163 ~~a~~~~~~li~D~~~~~~~~~----~~~----~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~ 234 (265)
++|+++|+++|+||+|+.+.+. ... ..+.|+++.|+||++ |++|+++|+++++++ +.+.+..........
T Consensus 177 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~ 254 (370)
T 2z61_A 177 EFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLY-AMTGWRIGYVISNDE-IIEAILKLQQNLFIS 254 (370)
T ss_dssp HHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTT-TCGGGCCEEEECCHH-HHHHHHHHHHHHTSS
T ss_pred HHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhcc-CCccceEEEEEECHH-HHHHHHHHHhhcccC
Confidence 9999999999999999865542 112 236799999999999 677899999998874 445455554444556
Q ss_pred CChhHHHHHHhccCc
Q 024619 235 LAPFDCWICLRGVKT 249 (265)
Q Consensus 235 ~~~~~~~~~~~~l~~ 249 (265)
.++..+..+.+.++.
T Consensus 255 ~~~~~~~a~~~~l~~ 269 (370)
T 2z61_A 255 APTISQYAALKAFEK 269 (370)
T ss_dssp SCHHHHHHHGGGGSH
T ss_pred CCHHHHHHHHHHHhc
Confidence 666666666666654
No 29
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.94 E-value=1.2e-25 Score=196.25 Aligned_cols=228 Identities=18% Similarity=0.170 Sum_probs=162.4
Q ss_pred ceeEeeccCCCCCCCCCCCCeeeccccccCCCCCC--CCCccCCCCChhHHHHHHHHHhHhCCCceEEecchHHHHH-HH
Q 024619 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATEN--GPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (265)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~ 86 (265)
+..+++|+ ++.++|..++|.+............. ....|.....+...++++.+++++|.++.+++++|++++. ++
T Consensus 38 g~~~id~~-~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~~ 116 (384)
T 1bs0_A 38 DRQYLNFS-SNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSRALLFISGFAANQAVI 116 (384)
T ss_dssp TEEEEECS-CCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHH
T ss_pred CceEEEee-ccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHH
Confidence 45789999 66666754555444432211110010 1111221122568999999999999988999999998885 67
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC---CceEEEEecCCCCccccccHHHHHH
Q 024619 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP---WTKLVWVESPTNPRQQICDIRKIAE 163 (265)
Q Consensus 87 ~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~~~np~G~~~~l~~i~~ 163 (265)
..++++||.|+++.|.|+.+.. .++..|.+++.++..|++++++.+.+ ++++|++++++||||.+.|+++|.+
T Consensus 117 ~~~~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~ 192 (384)
T 1bs0_A 117 AAMMAKEDRIAADRLSHASLLE----AASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQ 192 (384)
T ss_dssp HHHCCTTCEEEEETTCCHHHHH----HHHTSSSEEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHH
T ss_pred HHhCCCCcEEEEcccccHHHHH----HHHHcCCCEEEeCCCCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHH
Confidence 7788999999999999988864 44567999999999999999988864 3789999999999999999999999
Q ss_pred HHHHcCCEEEEeCCcCCCCCc---C----CCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHH--HHhccCC
Q 024619 164 MAHAHGALLLVDNSIMSPVLS---R----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAEGSG 234 (265)
Q Consensus 164 ~a~~~~~~li~D~~~~~~~~~---~----~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~--~~~~~~~ 234 (265)
+|+++|+++|+||+|+.+.+. . ....+.|++++|+||++ +++| |+++++++.+ +.+... .......
T Consensus 193 l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~-~~~G---G~~~~~~~~~-~~l~~~~~~~~~~~~ 267 (384)
T 1bs0_A 193 VTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGF-GVSG---AAVLCSSTVA-DYLLQFARHLIYSTS 267 (384)
T ss_dssp HHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTT-SSCC---EEEEECHHHH-HHHHHHCHHHHSSBC
T ss_pred HHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchh-hccC---cEEEeCHHHH-HHHHHhchhhhcCCC
Confidence 999999999999999877542 1 12235789999999999 4654 8888876544 333322 1222234
Q ss_pred CChhHHHHHHhcc
Q 024619 235 LAPFDCWICLRGV 247 (265)
Q Consensus 235 ~~~~~~~~~~~~l 247 (265)
.++..++.+...+
T Consensus 268 ~~~~~~~~~~~al 280 (384)
T 1bs0_A 268 MPPAQAQALRASL 280 (384)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 5555554444333
No 30
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.94 E-value=7.6e-26 Score=197.56 Aligned_cols=221 Identities=13% Similarity=0.138 Sum_probs=159.0
Q ss_pred eeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhC--CC--ceEEecchHHHHH-H
Q 024619 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--AD--RALCFTSGMAALA-A 85 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g--~~--~~i~~~~g~~al~-~ 85 (265)
..+++|+ .++...+.++.+..+...... ...+.|++...+.++++++++++++| .+ .++++++|++++. +
T Consensus 32 ~~~i~l~-~~~~~~~~~~~v~~a~~~~~~----~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~ 106 (391)
T 4dq6_A 32 NDLLPMW-VADMDFKAAPCIIDSLKNRLE----QEIYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLL 106 (391)
T ss_dssp SCSEECC-SSSCSSCCCHHHHHHHHHHHT----TCCCCCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH
T ss_pred CCceecc-ccCCCCCCCHHHHHHHHHHHh----CCCCCCCCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHH
Confidence 3568998 555433333333333221111 13455665433569999999999988 33 4666666679986 6
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC---------CHHHHHhhcCCCceEEEEecCCCCcccc-
Q 024619 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---------DLDEVASAIGPWTKLVWVESPTNPRQQI- 155 (265)
Q Consensus 86 ~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---------d~~~l~~~~~~~~~~i~~~~~~np~G~~- 155 (265)
+..++++||+|+++.|+|+++.. .++..|.+++.++.+ |++++++++.+ +++|++++|+||||.+
T Consensus 107 ~~~~~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~ 181 (391)
T 4dq6_A 107 INELTKANDKIMIQEPVYSPFNS----VVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVW 181 (391)
T ss_dssp HHHHSCTTCEEEECSSCCTHHHH----HHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCC
T ss_pred HHHhCCCCCEEEEcCCCCHHHHH----HHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCc
Confidence 77788999999999999999874 445678999988865 89999999988 9999999999999999
Q ss_pred --ccHHHHHHHHHHcCCEEEEeCCcCCCCCc-----CCCCC-----CccEEEeccccccccCCCceeeEEEeechhHHHH
Q 024619 156 --CDIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLEL-----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (265)
Q Consensus 156 --~~l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~~~~-----~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~ 223 (265)
.++++|+++|+++|+++|+||+|+...+. ..... +.++++.|+||++ |.+|+++|+++.+++.+.+.
T Consensus 182 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~~~~~ 260 (391)
T 4dq6_A 182 TKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTF-NIAGLQSSYVVLPDEKDYKL 260 (391)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHH-TCGGGCCEEEECCSHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhc-cCcccceEEEEeCCHHHHHH
Confidence 56899999999999999999999864432 11122 3449999999999 66789999999887555555
Q ss_pred HHHHHHhc-cCCCChhHHHH
Q 024619 224 LYFLQNAE-GSGLAPFDCWI 242 (265)
Q Consensus 224 ~~~~~~~~-~~~~~~~~~~~ 242 (265)
+....... ....++..+..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~a 280 (391)
T 4dq6_A 261 LDDAFTRIDIKRNNCFSLVA 280 (391)
T ss_dssp HHHHHHHTTCCCCCHHHHHH
T ss_pred HHHHHHhhcCCCCCHHHHHH
Confidence 55443333 33455544443
No 31
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.94 E-value=7.3e-26 Score=198.63 Aligned_cols=231 Identities=17% Similarity=0.167 Sum_probs=164.8
Q ss_pred cceeEeeccCCCCCCCCCCCCeeeccccccCCCCCCC--CCccCCCCChhHHHHHHHHHhHhCCCceEEecchHHHHH-H
Q 024619 9 VSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENG--PYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-A 85 (265)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~ 85 (265)
.+..+++|+ +++++|..++|.+..+........... ...|.....+...++++.+++++|.++.+++++|++++. +
T Consensus 43 ~g~~~id~~-~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~ 121 (401)
T 1fc4_A 43 DGSHVINFC-ANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGL 121 (401)
T ss_dssp TSCEEEECC-CSCTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTT
T ss_pred CCccEEEee-ccCcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCCCcEEEeCChHHHHHHH
Confidence 346799999 667788644554444321111100110 111211113568999999999999988899999998875 6
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC------CceEEEEecCCCCccccccHH
Q 024619 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP------WTKLVWVESPTNPRQQICDIR 159 (265)
Q Consensus 86 ~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~~~np~G~~~~l~ 159 (265)
+..++++||.|+++.|.|+++. ..++..|.+++.++..|++++++.+.+ ++++|++++|+||||.+.+++
T Consensus 122 ~~~~~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~ 197 (401)
T 1fc4_A 122 FETLLGAEDAIISDALNHASII----DGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLK 197 (401)
T ss_dssp HHHHCCTTCEEEEETTCCHHHH----HHHHTSCSEEEEECTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHH
T ss_pred HHHHcCCCCEEEEcchhHHHHH----HHHHHcCCceEEECCCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHH
Confidence 7778999999999999998775 345678999999998899999988864 789999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCcCCCCCc---------CCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHH--
Q 024619 160 KIAEMAHAHGALLLVDNSIMSPVLS---------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-- 228 (265)
Q Consensus 160 ~i~~~a~~~~~~li~D~~~~~~~~~---------~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~-- 228 (265)
+|.++|+++|+++|+||+|+.+... .....+.|++++|+||+++++. +|+++++++.+ +.+....
T Consensus 198 ~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~---gG~~~~~~~~~-~~l~~~~~~ 273 (401)
T 1fc4_A 198 GVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGAS---GGYTAARKEVV-EWLRQRSRP 273 (401)
T ss_dssp HHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSS---CEEEEECHHHH-HHHHHHCHH
T ss_pred HHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCC---CEEEEcCHHHH-HHHHHhCcC
Confidence 9999999999999999999755542 1122357999999999995554 48888876443 4333322
Q ss_pred HhccCCCChhHHHHHHhccC
Q 024619 229 NAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~l~ 248 (265)
.......++..++.+...++
T Consensus 274 ~~~~~~~~~~~~~a~~~~l~ 293 (401)
T 1fc4_A 274 YLFSNSLAPAIVAASIKVLE 293 (401)
T ss_dssp HHHSCCCCHHHHHHHHHHHH
T ss_pred ceeCCCCCHHHHHHHHHHHH
Confidence 22244556655555444443
No 32
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.94 E-value=2.8e-25 Score=193.39 Aligned_cols=229 Identities=15% Similarity=0.146 Sum_probs=164.2
Q ss_pred eeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhC--CC--ceEEecchHHHHH-H
Q 024619 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--AD--RALCFTSGMAALA-A 85 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g--~~--~~i~~~~g~~al~-~ 85 (265)
..+++|+ .++...+ ++|.+..+..... ....+.|++.....++++++++++.+| .+ .++++++|++++. +
T Consensus 24 ~~~i~l~-~~~~~~~-~~~~v~~a~~~~~---~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~ 98 (383)
T 3kax_A 24 EELIHAW-IADMDFE-VPQPIQTALKKRI---EHPIFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTS 98 (383)
T ss_dssp SCCEECC-CSSCSSC-CCHHHHHHHHHHH---HSCCCCCCCCCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH
T ss_pred CCeeecc-cccCCCC-CCHHHHHHHHHHH---hcCCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHH
Confidence 5789998 5543222 3444333221111 113456666544679999999999988 32 4556666679986 6
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC--------CCHHHHHhhcCCCceEEEEecCCCCcccccc
Q 024619 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (265)
Q Consensus 86 ~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~ 157 (265)
+..++++||+|+++.|+|+++. ..++..|.+++.++. .|++++++++.+++++|++++|+||||.+.+
T Consensus 99 ~~~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~ 174 (383)
T 3kax_A 99 IQAFTKENESVLVQPPIYPPFF----EMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWK 174 (383)
T ss_dssp HHHHCCTTCEEEECSSCCHHHH----HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCC
T ss_pred HHHhCCCCCEEEEcCCCcHHHH----HHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcC
Confidence 7778999999999999999887 444667899998885 3899999999889999999999999999976
Q ss_pred ---HHHHHHHHHHcCCEEEEeCCcCCCCCc-----CCCC-----CCccEEEeccccccccCCCceeeEEEeechhHHHHH
Q 024619 158 ---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (265)
Q Consensus 158 ---l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~~~-----~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~ 224 (265)
+++|+++|+++|+++|+||+|+...+. .... .+.++++.|+||++ +++|+++|+++.+++.+.+.+
T Consensus 175 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~ 253 (383)
T 3kax_A 175 KEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTF-NIAGLQASIIIIPNEKLRQAF 253 (383)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHH-TCGGGCCEEEECCCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhc-cCcchhheEEEeCCHHHHHHH
Confidence 677788899999999999999864432 1111 24569999999999 667899999988665565555
Q ss_pred HHHHHhcc-CCCChhHHHHHHhccCc
Q 024619 225 YFLQNAEG-SGLAPFDCWICLRGVKT 249 (265)
Q Consensus 225 ~~~~~~~~-~~~~~~~~~~~~~~l~~ 249 (265)
.......+ ...++.....+...++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~a~~~~l~~ 279 (383)
T 3kax_A 254 TSIQYRQGFHGLNIFAYTAMQSAYTE 279 (383)
T ss_dssp HHHHHHTTCCCCCHHHHHHHHHHTTT
T ss_pred HHHHhhcccCCCCHHHHHHHHHHHHh
Confidence 55444333 35566655555555543
No 33
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.94 E-value=5e-25 Score=192.83 Aligned_cols=226 Identities=19% Similarity=0.243 Sum_probs=161.0
Q ss_pred eeEeeccCCCCC-CCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCC----CceEEecchHHHH
Q 024619 11 TLLMNFSNEFDP-YGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAAL 83 (265)
Q Consensus 11 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~g~~al 83 (265)
..+++|+ .+.+ ++ .+|.+........ ......|+.. |.+ +++++++++.+.+|. +.++++++|++++
T Consensus 41 ~~~i~l~-~~~~~~~--~~~~v~~a~~~~~---~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al 114 (389)
T 1o4s_A 41 EDVINLT-AGEPDFP--TPEPVVEEAVRFL---QKGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQAL 114 (389)
T ss_dssp CCCEECC-CSSCSSC--CCHHHHHHHHHHH---TTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHH
T ss_pred CCEEEcc-CCCCCCC--CCHHHHHHHHHHH---hcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHH
Confidence 3578998 4443 33 2333333211111 1123467665 564 588888888877774 2455555566898
Q ss_pred H-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-------CHHHHHhhcCCCceEEEEecCCCCcccc
Q 024619 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQI 155 (265)
Q Consensus 84 ~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~~~~~~~~i~~~~~~np~G~~ 155 (265)
. ++..++++||+|++++|+|+++... ++..|.+++.++.+ |++++++++.+++++|++++|+||||.+
T Consensus 115 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~ 190 (389)
T 1o4s_A 115 FNAFMALLDPGDEVIVFSPVWVSYIPQ----IILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVV 190 (389)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCC
T ss_pred HHHHHHhCCCCCEEEEcCCCchhHHHH----HHHcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCC
Confidence 6 6677789999999999999998743 45578888888753 7899999998889999999999999999
Q ss_pred cc---HHHHHHHHHHcCCEEEEeCCcCCCCCc----CCCC----CCccEEEeccccccccCCCceeeEEEeechhHHHHH
Q 024619 156 CD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (265)
Q Consensus 156 ~~---l~~i~~~a~~~~~~li~D~~~~~~~~~----~~~~----~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~ 224 (265)
.+ +++|+++|+++|+++|+||+|+.+.+. .... .+.|+++.|+||++ |++|+++|+++++++ +.+.+
T Consensus 191 ~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~l~~~~~-~~~~l 268 (389)
T 1o4s_A 191 YRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSH-SMTGWRVGYLISSEK-VATAV 268 (389)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTT-TCGGGCCEEEECCHH-HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhc-CCcccceEEEEeCHH-HHHHH
Confidence 76 899999999999999999999866542 1111 46799999999999 677899999998765 44444
Q ss_pred HHHHHhccCCCChhHHHHHHhccC
Q 024619 225 YFLQNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~l~ 248 (265)
...........++..+..+.+.++
T Consensus 269 ~~~~~~~~~~~~~~~~~a~~~~l~ 292 (389)
T 1o4s_A 269 SKIQSHTTSCINTVAQYAALKALE 292 (389)
T ss_dssp HHHHHHHTCSCCHHHHHHHHHHTT
T ss_pred HHHhhhcccCCCHHHHHHHHHHHh
Confidence 444444445556655555555444
No 34
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.93 E-value=3.3e-25 Score=193.62 Aligned_cols=221 Identities=20% Similarity=0.251 Sum_probs=158.1
Q ss_pred eeEeeccCCCCC-CCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCC----CceEEecchHHHH
Q 024619 11 TLLMNFSNEFDP-YGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAAL 83 (265)
Q Consensus 11 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~g~~al 83 (265)
..+++|+ .+++ ++ ++|.+........ ......|+.. |.+ +++++++++.+.+|. +.++++++|++++
T Consensus 30 ~~~i~l~-~~~~~~~--~~~~v~~a~~~~~---~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~ 103 (388)
T 1j32_A 30 IDVCSFS-AGEPDFN--TPKHIVEAAKAAL---EQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSI 103 (388)
T ss_dssp CCCEECC-CSSCSSC--CCHHHHHHHHHHH---HTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHH
T ss_pred CCEEECC-CCCCCCC--CCHHHHHHHHHHH---hcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHH
Confidence 4588998 4444 33 2333332211111 1123467766 665 588899998888774 2345555556998
Q ss_pred H-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-------CHHHHHhhcCCCceEEEEecCCCCcccc
Q 024619 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQI 155 (265)
Q Consensus 84 ~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~~~~~~~~i~~~~~~np~G~~ 155 (265)
. ++..++++||+|++++|+|+++.. .++..|.+++.++.+ |++++++++.+++++|++++|+||||.+
T Consensus 104 ~~~~~~~~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~ 179 (388)
T 1j32_A 104 FNLMLAMIEPGDEVIIPAPFWVSYPE----MVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMV 179 (388)
T ss_dssp HHHHHHHCCTTCEEEEESSCCTHHHH----HHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred HHHHHHhcCCCCEEEEcCCCChhHHH----HHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcC
Confidence 6 667778999999999999999874 345678888888753 7899999998889999999999999999
Q ss_pred cc---HHHHHHHHHHcCCEEEEeCCcCCCCCc-----CCCC-----CCccEEEeccccccccCCCceeeEEEeechhHHH
Q 024619 156 CD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 222 (265)
Q Consensus 156 ~~---l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~~~-----~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~ 222 (265)
.+ +++|+++|+++|+++|+||+|+...+. .... .+.|+++.|+||++ +++|+++|+++++++ +.+
T Consensus 180 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~-~~~G~r~G~~~~~~~-~~~ 257 (388)
T 1j32_A 180 YTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTY-AMTGWRVGFLAGPVP-LVK 257 (388)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTT-TCTTTCCEEEECCHH-HHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhcc-CCcccceEEEEeCHH-HHH
Confidence 54 899999999999999999999865442 1111 34789999999999 677899999998765 444
Q ss_pred HHHHHHHhccCCCChhHHHHH
Q 024619 223 ELYFLQNAEGSGLAPFDCWIC 243 (265)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~ 243 (265)
.+...........++..++.+
T Consensus 258 ~l~~~~~~~~~~~~~~~~~a~ 278 (388)
T 1j32_A 258 AATKIQGHSTSNVCTFAQYGA 278 (388)
T ss_dssp HHHHHHHTTTCSCCHHHHHHH
T ss_pred HHHHHHhhcccCCCHHHHHHH
Confidence 444444444455565554443
No 35
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.93 E-value=5.3e-25 Score=192.40 Aligned_cols=197 Identities=17% Similarity=0.228 Sum_probs=148.5
Q ss_pred CccCCC-CCh-hHHHHHHHHHhHhCC----Cc-eEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCC
Q 024619 47 YDYTRS-GNP-TRDALESLLAKLDKA----DR-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (265)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~----~~-~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g 118 (265)
..|+.. |.+ +++++++++.+.+|. ++ ++++++|++++. ++..++++||+|++++|+|+++... ++..|
T Consensus 57 ~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g 132 (389)
T 1gd9_A 57 THYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPA----VILAG 132 (389)
T ss_dssp CSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHH----HHHHT
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH----HHHCC
Confidence 457665 665 588888888887773 35 666666679986 6666789999999999999998744 35568
Q ss_pred eEEEeecCC-------CHHHHHhhcCCCceEEEEecCCCCccccc---cHHHHHHHHHHcCCEEEEeCCcCCCCCc----
Q 024619 119 VVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (265)
Q Consensus 119 ~~~~~~~~~-------d~~~l~~~~~~~~~~i~~~~~~np~G~~~---~l~~i~~~a~~~~~~li~D~~~~~~~~~---- 184 (265)
.+++.++.+ |++++++++.+++++|++++|+||||.+. ++++|+++|++||+++|+||+|+.+.+.
T Consensus 133 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~ 212 (389)
T 1gd9_A 133 GKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARH 212 (389)
T ss_dssp CEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCC
T ss_pred CEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCC
Confidence 888887743 78999999988899999999999999997 4899999999999999999999876542
Q ss_pred -CCCC----CCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHHHhccCc
Q 024619 185 -RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT 249 (265)
Q Consensus 185 -~~~~----~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 249 (265)
.... .+.|+++.|+||++ +++|+|+|+++++++ +.+.+...........++..+..+...++.
T Consensus 213 ~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 280 (389)
T 1gd9_A 213 YSIASLDGMFERTITVNGFSKTF-AMTGWRLGFVAAPSW-IIERMVKFQMYNATCPVTFIQYAAAKALKD 280 (389)
T ss_dssp CCGGGSTTCGGGEEEEEESTTTT-TCGGGCCEEEECCHH-HHHHHHHHHTTTTCSCCHHHHHHHHHHHTC
T ss_pred CCHhhccCCCCCEEEEecChhhc-CCcccceEEEEECHH-HHHHHHHHHhhhccCCCHHHHHHHHHHHhC
Confidence 1112 35789999999999 677899999998764 444444444433445555555554444543
No 36
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.93 E-value=5.1e-25 Score=192.84 Aligned_cols=228 Identities=19% Similarity=0.203 Sum_probs=162.1
Q ss_pred CcceeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCC-----C-ceEEecch
Q 024619 8 GVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA-----D-RALCFTSG 79 (265)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~-----~-~~i~~~~g 79 (265)
..+..+|+|+ +++..-. .+|.+..+...... ....|++. |.+ +++++++++.+.+|. + .++++++|
T Consensus 27 ~~g~~~i~l~-~~~~~~~-~~~~v~~a~~~~~~----~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~ 100 (396)
T 3jtx_A 27 PEGMEAVPLH-IGEPKHP-TPKVITDALTASLH----ELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGS 100 (396)
T ss_dssp CTTCCCEECS-CCSCCSC-CCHHHHHHHHHTGG----GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSH
T ss_pred ccCCCeEEeC-CcCCCCC-CCHHHHHHHHHHhh----hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCc
Confidence 3456799999 5543222 33433332211111 34567766 665 599999999988773 3 45555555
Q ss_pred HHHHH-HHHHhcCCC-----CEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC------CHHHHHhhcCCCceEEEEec
Q 024619 80 MAALA-AVTHLLGTG-----EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVES 147 (265)
Q Consensus 80 ~~al~-~~~~~~~~g-----~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~------d~~~l~~~~~~~~~~i~~~~ 147 (265)
++++. ++..++++| |+|+++.|+|+++. ..++..|.+++.++.+ |++++++++.+++++|++++
T Consensus 101 ~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~ 176 (396)
T 3jtx_A 101 REALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYE----GATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCS 176 (396)
T ss_dssp HHHHHHHHHHHCCC---CCCCEEEEEESCCHHHH----HHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEES
T ss_pred HHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHH----HHHHHcCCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEEC
Confidence 68986 677788886 79999999999886 3446678899888753 77888888878899999999
Q ss_pred CCCCccccccH---HHHHHHHHHcCCEEEEeCCcCCCCCcC--CC-----------CCCccEEEeccccccccCCCceee
Q 024619 148 PTNPRQQICDI---RKIAEMAHAHGALLLVDNSIMSPVLSR--PL-----------ELGADIVMHSATKFIAGHSDVMAG 211 (265)
Q Consensus 148 ~~np~G~~~~l---~~i~~~a~~~~~~li~D~~~~~~~~~~--~~-----------~~~~di~~~s~sK~~~g~~g~~~G 211 (265)
|+||||.+.+. ++|+++|++||+++|+||+|+...... +. ..+.++++.|+||.+ +.+|+++|
T Consensus 177 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G 255 (396)
T 3jtx_A 177 PNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRS-NVPGLRSG 255 (396)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTS-SCGGGCCE
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEecccccc-CCcccceE
Confidence 99999999764 559999999999999999998644321 11 256789999999988 56789999
Q ss_pred EEEeechhHHHHHHHHHHhccCCCChhHHHHHHhcc
Q 024619 212 VLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV 247 (265)
Q Consensus 212 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 247 (265)
+++.+++ +.+.+...........++..+..+...+
T Consensus 256 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l 290 (396)
T 3jtx_A 256 FVAGDAE-LLKNFLLYRTYHGSAMSIPVQRASIAAW 290 (396)
T ss_dssp EEEECHH-HHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred EEEeCHH-HHHHHHHHHhhcccCCCHHHHHHHHHHh
Confidence 9987654 4454555555555566666555544433
No 37
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=4.6e-25 Score=196.68 Aligned_cols=228 Identities=16% Similarity=0.178 Sum_probs=159.4
Q ss_pred ceeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCCC----ceEEecchHHHH
Q 024619 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKAD----RALCFTSGMAAL 83 (265)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~----~~i~~~~g~~al 83 (265)
+..+|+|+.+...++ ++|.+........ .......|++. |.+ +++++.+++.+.+|.+ +++++++|++|+
T Consensus 56 ~~~~i~l~~g~~~~~--~~~~v~~a~~~~~--~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al 131 (447)
T 3b46_A 56 GRELINLGQGFFSYS--PPQFAIKEAQKAL--DIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGI 131 (447)
T ss_dssp TSCCEECCCCSCSSC--CCHHHHHHHHHHT--TSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHH
T ss_pred CCCeEEccCCCCCCC--CCHHHHHHHHHHH--hCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence 346899983322233 3343333221111 11124568776 775 5889999998887743 345555556998
Q ss_pred H-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC-----------------CCHHHHHhhcCCCceEEEE
Q 024619 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----------------CDLDEVASAIGPWTKLVWV 145 (265)
Q Consensus 84 ~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----------------~d~~~l~~~~~~~~~~i~~ 145 (265)
. ++..++++||+|++++|+|+.+... ++..|.+++.++. .|++++++++.+++++|++
T Consensus 132 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l 207 (447)
T 3b46_A 132 LSCLMGLLNAGDEVIVFEPFFDQYIPN----IELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVII 207 (447)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEE
T ss_pred HHHHHHHcCCCCEEEEeCCCchhHHHH----HHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEE
Confidence 6 7777899999999999999999743 4556778777653 3789999999888999999
Q ss_pred ecCCCCccccc---cHHHHHHHHHHcCCEEEEeCCcCCCCCc----CCC-----CCCccEEEeccccccccCCCceeeEE
Q 024619 146 ESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS----RPL-----ELGADIVMHSATKFIAGHSDVMAGVL 213 (265)
Q Consensus 146 ~~~~np~G~~~---~l~~i~~~a~~~~~~li~D~~~~~~~~~----~~~-----~~~~di~~~s~sK~~~g~~g~~~G~v 213 (265)
++|+||||.+. ++++|+++|++||+++|+||+|+...+. ... ..+.|+++.|+||++ +.+|+|+|++
T Consensus 208 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~-~~~G~riG~~ 286 (447)
T 3b46_A 208 NTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSF-AATGWRIGWV 286 (447)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHT-TCTTSCCEEE
T ss_pred eCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhc-CCcchhhEEE
Confidence 99999999995 5899999999999999999999864432 111 236899999999999 6678999999
Q ss_pred Ee-echhHHHHHHHHHHhccCCCChhHHHHHHhcc
Q 024619 214 AV-KGERLAKELYFLQNAEGSGLAPFDCWICLRGV 247 (265)
Q Consensus 214 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 247 (265)
++ +++ +.+.+...........++..+..+...|
T Consensus 287 ~~~~~~-l~~~l~~~~~~~~~~~~~~~~~a~~~aL 320 (447)
T 3b46_A 287 LSLNAE-LLSYAAKAHTRICFASPSPLQEACANSI 320 (447)
T ss_dssp ECSCHH-HHHHHHHHHHHHTSSCCHHHHHHHHHHH
T ss_pred EeCCHH-HHHHHHHHHhhccCCCChHHHHHHHHHH
Confidence 98 554 4444444444444445554444433333
No 38
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.93 E-value=5.9e-25 Score=192.66 Aligned_cols=202 Identities=17% Similarity=0.220 Sum_probs=149.6
Q ss_pred eeEeeccCCCCCCCCCCCCeeeccccccCCCCCCC-CCccCCC-CCh-hHHHHHHHHHhHhCC--C--ceEEecchHHHH
Q 024619 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENG-PYDYTRS-GNP-TRDALESLLAKLDKA--D--RALCFTSGMAAL 83 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~y~~~-g~~-~~~~l~~~l~~~~g~--~--~~i~~~~g~~al 83 (265)
..+++|+ +++.... ++|.+.............. .+.|++. |.+ +++++++++.+.+|. + .++++++|++++
T Consensus 35 ~~~i~l~-~~~~~~~-~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al 112 (398)
T 3ele_A 35 ENVYDFS-IGNPSIP-APQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASL 112 (398)
T ss_dssp GGCEECC-SCCCCSC-CCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHH
T ss_pred CCeEEee-cCCCCCC-CCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHH
Confidence 4589999 5543332 3444433321111100000 3567665 665 599999999988873 2 455555556998
Q ss_pred H-HHHHhcCCC-CEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC------CHHHHHhhcCCCceEEEEecCCCCcccc
Q 024619 84 A-AVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQI 155 (265)
Q Consensus 84 ~-~~~~~~~~g-~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~------d~~~l~~~~~~~~~~i~~~~~~np~G~~ 155 (265)
. ++..++++| |+|+++.|+|+++.. .++..|.+++.++.+ |++++++++.+++++|++++|+||||.+
T Consensus 113 ~~~~~~l~~~g~d~vl~~~p~~~~~~~----~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~ 188 (398)
T 3ele_A 113 SICFRALTSDAYDEFITIAPYFPEYKV----FVNAAGARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPSGTV 188 (398)
T ss_dssp HHHHHHHCCSTTCEEEEESSCCTHHHH----HHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCC
T ss_pred HHHHHHHcCCCCCEEEEeCCCchhhHH----HHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCC
Confidence 6 677789999 999999999999874 445678999998865 8999999999899999999999999999
Q ss_pred cc---HHHHHHHHHH------cCCEEEEeCCcCCCCCc-----CC-CCCCccEEEeccccccccCCCceeeEEEeechh
Q 024619 156 CD---IRKIAEMAHA------HGALLLVDNSIMSPVLS-----RP-LELGADIVMHSATKFIAGHSDVMAGVLAVKGER 219 (265)
Q Consensus 156 ~~---l~~i~~~a~~------~~~~li~D~~~~~~~~~-----~~-~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~ 219 (265)
.+ +++|+++|++ +|+++|+||+|+...+. .. ...+.++++.|+||++ |.+|+|.|+++++++.
T Consensus 189 ~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~ 266 (398)
T 3ele_A 189 YSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSL-SLPGERIGYVLVPDEV 266 (398)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTS-SCTTTCCEEEECCTTS
T ss_pred CCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcC-CCccceeEEEEEcchh
Confidence 87 6788899999 99999999999864332 11 2335789999999999 6678999999988763
No 39
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.93 E-value=7e-25 Score=193.26 Aligned_cols=227 Identities=14% Similarity=0.144 Sum_probs=154.2
Q ss_pred eeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCC-----CceEEecchHHHH
Q 024619 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA-----DRALCFTSGMAAL 83 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~-----~~~i~~~~g~~al 83 (265)
..+++|+.....++ ++|.+........ .....+.|++. |.+ +++++++++.+.+|. +.++++++|++++
T Consensus 37 ~~~idl~~g~~~~~--~~~~v~~a~~~~~--~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~ 112 (412)
T 2x5d_A 37 EDIIDLSMGNPDGP--TPPHIVEKLCTVA--QREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGL 112 (412)
T ss_dssp CCCEECSSCCCCSC--CCHHHHHHHHHTC-----------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHH
T ss_pred CCEEecCCCCCCCC--CCHHHHHHHHHHH--hCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHH
Confidence 45789983332233 3444433321111 11123467655 665 488888888777774 3566666667998
Q ss_pred H-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-------CHHHHHhhcCCCceEEEEecCCCCcccc
Q 024619 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQI 155 (265)
Q Consensus 84 ~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~~~~~~~~i~~~~~~np~G~~ 155 (265)
. ++..++++||+|+++.|+|+++...+ +..|.+++.++.+ |++++++++.+++++|++++|+||||.+
T Consensus 113 ~~~~~~~~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~ 188 (412)
T 2x5d_A 113 AHLMLATLDHGDTILVPNPSYPIHIYGA----VIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQC 188 (412)
T ss_dssp HHHHHHHCCTTCEEEEEESCCHHHHHHH----HHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCC
T ss_pred HHHHHHhCCCCCEEEEcCCCchhHHHHH----HHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCc
Confidence 6 66778899999999999999887443 4568888888754 4688888888889999999999999999
Q ss_pred cc---HHHHHHHHHHcCCEEEEeCCcCCCCCc-----CCCC----CCccEEEeccccccccCCCceeeEEEeechhHHHH
Q 024619 156 CD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (265)
Q Consensus 156 ~~---l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~~~----~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~ 223 (265)
.+ +++|+++|+++|+++|+||+|+.+.+. .... .+.|+++.|+||++ |++|+++|+++++++. .+.
T Consensus 189 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~-~~~ 266 (412)
T 2x5d_A 189 VELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSY-NMAGWRIGFMVGNPEL-VSA 266 (412)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CC-SCTTSCCEEEEECHHH-HHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCcccc-CCcccceEEEEcCHHH-HHH
Confidence 75 689999999999999999999875531 1111 36789999999999 6678999999986644 444
Q ss_pred HHHHHHhccCCCChhHHHHHHhcc
Q 024619 224 LYFLQNAEGSGLAPFDCWICLRGV 247 (265)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~l 247 (265)
+...........++..+..+...|
T Consensus 267 l~~~~~~~~~~~~~~~~~a~~~~l 290 (412)
T 2x5d_A 267 LARIKSYHDYGTFTPLQVAAIAAL 290 (412)
T ss_dssp HHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred HHHHHhhhccCCCHHHHHHHHHHH
Confidence 444444444555655554433333
No 40
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.93 E-value=1e-25 Score=195.93 Aligned_cols=228 Identities=12% Similarity=0.113 Sum_probs=160.5
Q ss_pred ceeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCC----CceEEecchHHHHH-
Q 024619 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA----DRALCFTSGMAALA- 84 (265)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~----~~~i~~~~g~~al~- 84 (265)
+..+|+|+ +++.... ++|.+..+..... ....+.|++.|...++++++++.+.+|. +.++++++|++++.
T Consensus 22 g~~~idl~-~~~~~~~-~~~~v~~a~~~~~---~~~~~~y~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~ 96 (377)
T 3fdb_A 22 GQGVLPLW-VAESDFS-TCPAVLQAITDAV---QREAFGYQPDGSLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYI 96 (377)
T ss_dssp CTTSEECC-SSCCCSC-CCHHHHHHHHHHH---HTTCCSSCCSSCCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHH
T ss_pred CCCeeeec-ccCCCCC-CCHHHHHHHHHHH---HcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHH
Confidence 35689998 4443222 3333333221111 1124456654545688888888877663 34666666679986
Q ss_pred HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC---CHHHHHhhcCCCceEEEEecCCCCcccccc---H
Q 024619 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---DLDEVASAIGPWTKLVWVESPTNPRQQICD---I 158 (265)
Q Consensus 85 ~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---d~~~l~~~~~~~~~~i~~~~~~np~G~~~~---l 158 (265)
++..++++||+|+++.|+|+++.. .++..|.+++.++.+ |++++++++.++++++++++|+||||.+.+ +
T Consensus 97 ~~~~~~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l 172 (377)
T 3fdb_A 97 AIDHFTPAQSKVIVPTPAYPPFFH----LLSATQREGIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWL 172 (377)
T ss_dssp HHHHHSCTTCCEEEEESCCTHHHH----HHHHHTCCEEEEECTTSCCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHH
T ss_pred HHHHhcCCCCEEEEcCCCcHhHHH----HHHHcCCEEEEccCCCCCCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHH
Confidence 677788999999999999999874 445578889998876 899999999888999999999999999974 7
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCcC-----CC-C---CCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHH
Q 024619 159 RKIAEMAHAHGALLLVDNSIMSPVLSR-----PL-E---LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 229 (265)
Q Consensus 159 ~~i~~~a~~~~~~li~D~~~~~~~~~~-----~~-~---~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~ 229 (265)
++|+++|+++|+++|+||+|+...+.. +. . .+.++++.|+||++ |.+|+++|+++..++.+.+.+.....
T Consensus 173 ~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~~~~~~~~~~~ 251 (377)
T 3fdb_A 173 NELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAW-NIAGLKCAQIIFSNPSDAEHWQQLSP 251 (377)
T ss_dssp HHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTT-TCGGGCCEEEECCSHHHHHHHHHSCH
T ss_pred HHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhc-cCcchhheEEEeCCHHHHHHHHHHHH
Confidence 888888999999999999998643321 11 1 24569999999999 66789999888766566555544443
Q ss_pred hccCCCChhHHHHHHhcc
Q 024619 230 AEGSGLAPFDCWICLRGV 247 (265)
Q Consensus 230 ~~~~~~~~~~~~~~~~~l 247 (265)
......++..+..+...+
T Consensus 252 ~~~~~~~~~~~~a~~~~l 269 (377)
T 3fdb_A 252 VIKDGASTLGLIAAEAAY 269 (377)
T ss_dssp HHHCCCCHHHHHHHHHHH
T ss_pred hhcCCCCHHHHHHHHHHH
Confidence 344556655554433333
No 41
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.93 E-value=3.3e-25 Score=192.79 Aligned_cols=196 Identities=18% Similarity=0.217 Sum_probs=146.7
Q ss_pred CCCccCCCCChhHHHHHHHHHhHhC---CCceEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeE
Q 024619 45 GPYDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (265)
Q Consensus 45 ~~~~y~~~g~~~~~~l~~~l~~~~g---~~~~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~ 120 (265)
..+.|++. +...++++.++++++ .+.++++++|++|+. ++..++++||+|+++.|+|+++. ..++..|.+
T Consensus 55 ~~~~y~~~--~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~~ 128 (375)
T 3op7_A 55 TKLNYGWI--EGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLY----DIPKSLGAE 128 (375)
T ss_dssp SCCSSCCT--TCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHH----HHHHHTTCE
T ss_pred CCcCCCCC--CChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHH----HHHHHcCCE
Confidence 34566665 223456667777652 345777777779986 67788999999999999999887 344567888
Q ss_pred EEeecCC-------CHHHHHhhcCCCceEEEEecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCcC-C---
Q 024619 121 VKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-P--- 186 (265)
Q Consensus 121 ~~~~~~~-------d~~~l~~~~~~~~~~i~~~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~~-~--- 186 (265)
++.++.+ |++++++++.+++++|++++|+||||.+.| +++|+++|++||+++|+||+|+...... +
T Consensus 129 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~ 208 (375)
T 3op7_A 129 VDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSII 208 (375)
T ss_dssp EEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHH
T ss_pred EEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchh
Confidence 8888754 899999999999999999999999999998 9999999999999999999998654431 1
Q ss_pred CCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHHHhccC
Q 024619 187 LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 187 ~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (265)
...+.++++.|+||++ +.+|+++|++++++ .+.+.+...........++..++.+...++
T Consensus 209 ~~~~~~i~~~s~sK~~-~~~G~r~G~v~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (375)
T 3op7_A 209 EVYDKGIAVNSLSKTY-SLPGIRIGWVAANH-QVTDILRDYRDYTMICAGVFDDLVAQLALA 268 (375)
T ss_dssp HHCTTEEEEEESSSSS-SCGGGCCEEEECCH-HHHHHHTTTGGGTTSCCCHHHHHHHHHHHH
T ss_pred hhcCCEEEEeEChhhc-CCcccceEEEEeCH-HHHHHHHHHHhhhccCCCcHHHHHHHHHHh
Confidence 1235679999999999 56689999998854 454544444444444556555555444444
No 42
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.93 E-value=2.4e-24 Score=188.37 Aligned_cols=224 Identities=18% Similarity=0.190 Sum_probs=154.5
Q ss_pred eeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCC----CceEEecchHHHHH
Q 024619 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALA 84 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~g~~al~ 84 (265)
..+|+|+ +++.. ...+|.+....... .......|++. |.+ +++++++++.+.+|. +.++++++|++|+.
T Consensus 31 ~~~i~l~-~g~~~-~~~~~~v~~a~~~~---~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~ 105 (391)
T 3h14_A 31 RRIIHME-VGQPG-TGAPRGAVEALAKS---LETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFL 105 (391)
T ss_dssp CCCEECC-CSSCS-SCSCHHHHHHHHHH---HC----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred CCeEEcc-CCCCC-CCCCHHHHHHHHHH---HhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHH
Confidence 4689998 44422 22234333222111 11134567766 665 588898888887763 24666666679986
Q ss_pred -HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-------CHHHHHhhcCCCceEEEEecCCCCccccc
Q 024619 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (265)
Q Consensus 85 -~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~~~~~~~~i~~~~~~np~G~~~ 156 (265)
++..++++||+|+++.|+|+++.. .++..|.+++.++.+ |+++++++ ++++|++++|+||||.+.
T Consensus 106 ~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---~~~~v~i~~p~nptG~~~ 178 (391)
T 3h14_A 106 LAFTALFDSGDRVGIGAPGYPSYRQ----ILRALGLVPVDLPTAPENRLQPVPADFAGL---DLAGLMVASPANPTGTML 178 (391)
T ss_dssp HHHHHHCCTTCEEEEEESCCHHHHH----HHHHTTCEEEEEECCGGGTTSCCHHHHTTS---CCSEEEEESSCTTTCCCC
T ss_pred HHHHHhcCCCCEEEEcCCCCccHHH----HHHHcCCEEEEeecCcccCCCCCHHHHHhc---CCeEEEECCCCCCCCccC
Confidence 677789999999999999998874 445678899988864 78888776 799999999999999998
Q ss_pred c---HHHHHHHHHHcCCEEEEeCCcCCCCCc----CCCC-CCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHH
Q 024619 157 D---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 228 (265)
Q Consensus 157 ~---l~~i~~~a~~~~~~li~D~~~~~~~~~----~~~~-~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~ 228 (265)
+ +++|+++|+++|+++|+||+|+...+. .... .+.+++++|+||++ |++|+++|+++.+++.+ +.+....
T Consensus 179 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~~-~~~~~~~ 256 (391)
T 3h14_A 179 DHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYF-SMTGWRVGWMVVPEDQV-RVVERIA 256 (391)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTT-CCTTSCCEEEECCGGGH-HHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhcc-CCccceeEEEEeCHHHH-HHHHHHH
Confidence 6 899999999999999999999854432 1112 25679999999999 67789999999877544 4455555
Q ss_pred HhccCCCChhHHHHHHhccC
Q 024619 229 NAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~l~ 248 (265)
.......++..+..+...++
T Consensus 257 ~~~~~~~~~~~~~a~~~~l~ 276 (391)
T 3h14_A 257 QNMFICAPHASQVAALAALD 276 (391)
T ss_dssp HHTTCCCCHHHHHHHHHHTT
T ss_pred hhhccCCCHHHHHHHHHHhC
Confidence 55555566655555444443
No 43
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.93 E-value=2.5e-25 Score=196.73 Aligned_cols=224 Identities=17% Similarity=0.151 Sum_probs=160.5
Q ss_pred ceeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhC--CC--ceEEecchHHHHH-
Q 024619 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--AD--RALCFTSGMAALA- 84 (265)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g--~~--~~i~~~~g~~al~- 84 (265)
...+|+|+ ..+.....+|.+..+...... ...+.|++.....++++++++++.+| .+ .++++++|++|+.
T Consensus 60 g~~~i~~~-~~~~~~~~~~~v~~a~~~~~~----~~~~~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~ 134 (421)
T 3l8a_A 60 NPELLQMW-VADMDFLPVPEIKEAIINYGR----EHIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISI 134 (421)
T ss_dssp CTTCEECC-SSCCCSCCCHHHHHHHHHHHH----HCCSSCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHH
T ss_pred CCCeeecc-cCCCCCCCCHHHHHHHHHHHh----cCCcCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHH
Confidence 34688887 555544444444444321111 13456666554569999999999988 33 3555555568986
Q ss_pred HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC--------CHHHHHhhcC-CCceEEEEecCCCCcccc
Q 024619 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--------DLDEVASAIG-PWTKLVWVESPTNPRQQI 155 (265)
Q Consensus 85 ~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--------d~~~l~~~~~-~~~~~i~~~~~~np~G~~ 155 (265)
++..+.++||+|++..|+|+++.. .++..|.+++.++.. |++++++++. +++++|++++|+||+|.+
T Consensus 135 a~~~~~~~gd~Vi~~~~~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~ 210 (421)
T 3l8a_A 135 ALQAFSEKGDAVLINSPVYYPFAR----TIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRV 210 (421)
T ss_dssp HHHHHSCTEEEEEEEESCCHHHHH----HHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBC
T ss_pred HHHHhcCCCCEEEECCCCcHHHHH----HHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCc
Confidence 677788999999999999998874 345578888888753 8999999997 789999999999999998
Q ss_pred ---ccHHHHHHHHHHcCCEEEEeCCcCCCCCc-----CC-----CCCCccEEEeccccccccCCCceeeEEEeechhHHH
Q 024619 156 ---CDIRKIAEMAHAHGALLLVDNSIMSPVLS-----RP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 222 (265)
Q Consensus 156 ---~~l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~-----~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~ 222 (265)
.++++|.++|++||+++|+||+|+...+. .. ...+.++.+.|+||++ +.+|+++|+++.+++.+.+
T Consensus 211 ~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~~~G~~~~~~~~l~~ 289 (421)
T 3l8a_A 211 WDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTF-NIAGTKNSFAIIQNESLRR 289 (421)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHH-TCGGGCCEEEECCSHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhc-cCchhheEeEEcCCHHHHH
Confidence 56899999999999999999999753321 11 1125669999999999 6667899999988556655
Q ss_pred HHHHHHHhc-cCCCChhHHHHH
Q 024619 223 ELYFLQNAE-GSGLAPFDCWIC 243 (265)
Q Consensus 223 ~~~~~~~~~-~~~~~~~~~~~~ 243 (265)
.+....... ....++..+..+
T Consensus 290 ~~~~~~~~~~~~~~n~~~~~a~ 311 (421)
T 3l8a_A 290 KFQYRQLANNQHEVPTVGMIAT 311 (421)
T ss_dssp HHHHHHHHTTCSCCCHHHHHHH
T ss_pred HHHHHHHhcccCCCCHHHHHHH
Confidence 555444333 234555554443
No 44
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.93 E-value=2.6e-24 Score=189.52 Aligned_cols=225 Identities=19% Similarity=0.243 Sum_probs=159.3
Q ss_pred eeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCC----CceEEecchHHHHH
Q 024619 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALA 84 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~g~~al~ 84 (265)
..+++|+ .+++ +..++|.+.... ... ......|+.. |.. +++++.+++.+.+|. +.++++++|++|+.
T Consensus 43 ~~~i~l~-~~~~-~~~~~~~v~~a~-~~l---~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~ 116 (409)
T 2gb3_A 43 VRIHHLN-IGQP-DLKTPEVFFERI-YEN---KPEVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAIL 116 (409)
T ss_dssp CEEEECS-SCCC-CSCCCTHHHHHH-HHT---CCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHH
T ss_pred CCEEecc-CCCC-CCCCCHHHHHHH-HHH---hcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHH
Confidence 4689998 5554 222344433322 211 1123457665 554 477888888776553 34666666679986
Q ss_pred -HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCC------HHHHHhhcCCCceEEEEecCCCCccccc-
Q 024619 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCD------LDEVASAIGPWTKLVWVESPTNPRQQIC- 156 (265)
Q Consensus 85 -~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d------~~~l~~~~~~~~~~i~~~~~~np~G~~~- 156 (265)
++..++++||+|++++|+|+++.. .++..|.+++.++.++ ++++++++.+++++|++++|+||||.+.
T Consensus 117 ~~~~~~~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~~~~~~v~~~~p~nptG~~~~ 192 (409)
T 2gb3_A 117 FSFAVIANPGDEILVLEPFYANYNA----FAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYG 192 (409)
T ss_dssp HHHHHHCCTTCEEEEEESCCTHHHH----HHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHhCCCCCEEEEcCCCchhHHH----HHHHcCCEEEEeccCCCCCCccHHHHHHhhCcCCeEEEECCCCCCCCCCcC
Confidence 667778999999999999998874 3455788888888653 7888888888899999999999999986
Q ss_pred --cHHHHHHHHHHcCCEEEEeCCcCCCCCc----CCC-C-CCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHH
Q 024619 157 --DIRKIAEMAHAHGALLLVDNSIMSPVLS----RPL-E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 228 (265)
Q Consensus 157 --~l~~i~~~a~~~~~~li~D~~~~~~~~~----~~~-~-~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~ 228 (265)
++++|+++|+++|+++|+||+|+.+.+. ... . .+.|++++|+||++ |++|+++|+++++++.+.+.+....
T Consensus 193 ~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~l~~~l~~~~ 271 (409)
T 2gb3_A 193 KDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKF-SACGARVGCLITRNEELISHAMKLA 271 (409)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTT-TCGGGCCEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhcc-CCccceEEEEEECcHHHHHHHHHHH
Confidence 4899999999999999999999865442 111 1 35799999999999 6678999999988834445444444
Q ss_pred HhccCCCChhHHHHHHhcc
Q 024619 229 NAEGSGLAPFDCWICLRGV 247 (265)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~l 247 (265)
.... ..++..+..+...|
T Consensus 272 ~~~~-~~~~~~~~a~~~~l 289 (409)
T 2gb3_A 272 QGRL-APPLLEQIGSVGLL 289 (409)
T ss_dssp HHSC-CCCHHHHHHHHHHH
T ss_pred hccC-CCCHHHHHHHHHHH
Confidence 4443 55555555544444
No 45
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.93 E-value=1.7e-24 Score=188.73 Aligned_cols=188 Identities=19% Similarity=0.180 Sum_probs=142.2
Q ss_pred CccCCCCChhHHHHHHHHHhHhCCC--ceEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEe
Q 024619 47 YDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKR 123 (265)
Q Consensus 47 ~~y~~~g~~~~~~l~~~l~~~~g~~--~~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (265)
..|+.. ....++++.++++++.+ +++++++|++++. ++..++++||+|++++|+|+++.. .++..|.+++.
T Consensus 55 ~~y~~~--~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~ 128 (381)
T 1v2d_A 55 DQYAPP--AGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLP----DAFLAGAKARL 128 (381)
T ss_dssp CSCCCT--TCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH----HHHHTTCEEEE
T ss_pred cCCCCC--CCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH----HHHHcCCEEEE
Confidence 345554 12456777778888875 5666666679986 667778999999999999999874 44567888888
Q ss_pred ecCC--------CHHHHHhhcCCCceEEEEecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc----CCC-
Q 024619 124 VNTC--------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPL- 187 (265)
Q Consensus 124 ~~~~--------d~~~l~~~~~~~~~~i~~~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~----~~~- 187 (265)
++.+ |++++++++.+++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|+...++ ...
T Consensus 129 v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~ 208 (381)
T 1v2d_A 129 VRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLRE 208 (381)
T ss_dssp EECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHH
T ss_pred EeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHH
Confidence 8764 799999999888999999999999999975 899999999999999999999865432 111
Q ss_pred -CCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHH
Q 024619 188 -ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (265)
Q Consensus 188 -~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (265)
..+.|+++.|+||++ +++|+++|+++++++.+ +.+...........++..+..
T Consensus 209 ~~~~~~~~~~s~sK~~-~~~G~r~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a 262 (381)
T 1v2d_A 209 FAPERTFTVGSAGKRL-EATGYRVGWIVGPKEFM-PRLAGMRQWTSFSAPTPLQAG 262 (381)
T ss_dssp HCTTTEEEEEEHHHHT-TCGGGCCEEEECCTTTH-HHHHHHHHHHTSSCCHHHHHH
T ss_pred hcCCCEEEEeechhhc-CCcccceEEEEeCHHHH-HHHHHHHhhcccCCCcHHHHH
Confidence 347899999999999 66789999999876544 434333333344445444433
No 46
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.93 E-value=1.3e-24 Score=190.53 Aligned_cols=221 Identities=12% Similarity=0.136 Sum_probs=155.7
Q ss_pred eEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCCh-hHHHHHHHHHhHhC--CC--ceEEecchHHHHH-H
Q 024619 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNP-TRDALESLLAKLDK--AD--RALCFTSGMAALA-A 85 (265)
Q Consensus 12 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~-~~~~l~~~l~~~~g--~~--~~i~~~~g~~al~-~ 85 (265)
.+++|+ .++ .+..++|.+........ ......|+.. .+ +++++++++.+.+| .+ .++++++|++|+. +
T Consensus 32 ~~i~l~-~~~-~~~~~~~~v~~a~~~~~---~~~~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~ 105 (399)
T 1c7n_A 32 EVVPLS-VAD-MEFKNPPELIEGLKKYL---DETVLGYTGP-TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNA 105 (399)
T ss_dssp TCCCCC-SSS-CSSCCCHHHHHHHHHHH---HHCCCSSBCC-CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHH
T ss_pred Cceeee-ecC-CCCCCCHHHHHHHHHHH---hcCCCCCCCC-cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHH
Confidence 578887 444 33334444433321111 0123456554 43 58888888887777 33 4555555678986 6
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC--------CCHHHHHhhcC-CCceEEEEecCCCCccccc
Q 024619 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIG-PWTKLVWVESPTNPRQQIC 156 (265)
Q Consensus 86 ~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~d~~~l~~~~~-~~~~~i~~~~~~np~G~~~ 156 (265)
+..++++||+|+++.|+|+++.. .++..|.+++.++. .|++++++++. +++++|++++|+||||.+.
T Consensus 106 ~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~ 181 (399)
T 1c7n_A 106 VREFTKPGDGVIIITPVYYPFFM----AIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVW 181 (399)
T ss_dssp HHHHCCTTCEEEECSSCCTHHHH----HHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCC
T ss_pred HHHhcCCCCEEEEcCCCcHhHHH----HHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCc
Confidence 77788999999999999999874 44567889988875 47899999987 7899999999999999998
Q ss_pred c---HHHHHHHHHHcCCEEEEeCCcCCCCCc-----CCCC-----CCccEEEeccccccccCCCceeeEEEeechhHHHH
Q 024619 157 D---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (265)
Q Consensus 157 ~---l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~~~-----~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~ 223 (265)
+ +++|+++|+++|+++|+||+|+...+. .... .+.++++.|+||++ +++|+++|+++++++.+.+.
T Consensus 182 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~ 260 (399)
T 1c7n_A 182 KKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTF-NIAGMGMSNIIIKNPDIRER 260 (399)
T ss_dssp CHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHH-TCGGGCCEEEECCCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhc-cccchheEEEEECCHHHHHH
Confidence 7 899999999999999999999864431 1111 24679999999999 66789999999876555554
Q ss_pred HHHHHHhccC-CCChhHHHHH
Q 024619 224 LYFLQNAEGS-GLAPFDCWIC 243 (265)
Q Consensus 224 ~~~~~~~~~~-~~~~~~~~~~ 243 (265)
+......... ..++..++.+
T Consensus 261 l~~~~~~~~~~~~~~~~~~a~ 281 (399)
T 1c7n_A 261 FTKSRDATSGMPFTTLGYKAC 281 (399)
T ss_dssp HHHHHHHTTCCCCCHHHHHHH
T ss_pred HHHHHhhcccCCCCHHHHHHH
Confidence 5444444332 3455544443
No 47
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.92 E-value=7.5e-25 Score=189.00 Aligned_cols=222 Identities=15% Similarity=0.180 Sum_probs=158.3
Q ss_pred ceeEeeccCCCC-CCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCC--ceEEecchHHHHH-H
Q 024619 10 STLLMNFSNEFD-PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALA-A 85 (265)
Q Consensus 10 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~--~~i~~~~g~~al~-~ 85 (265)
+..+++|+ +++ .++ ++|.+........ . ....| +.+...++++.+++++|.+ .++++++|++++. +
T Consensus 15 ~~~~i~l~-~~~~~~~--~~~~v~~a~~~~~--~--~~~~y---~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~ 84 (354)
T 3ly1_A 15 TDNPIRIN-FNENPLG--MSPKAQAAARDAV--V--KANRY---AKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAA 84 (354)
T ss_dssp SSSCEECS-SCCCSSC--CCHHHHHHHHHTG--G--GTTSC---CHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHH
T ss_pred CCceEEcc-CCCCCCC--CCHHHHHHHHHHH--h--hCcCC---CCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHH
Confidence 45789999 444 233 3343333321111 1 12334 2345789999999999865 4555555669986 6
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-----CHHHHHhhcC--CCceEEEEecCCCCccccccH
Q 024619 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG--PWTKLVWVESPTNPRQQICDI 158 (265)
Q Consensus 86 ~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~~~--~~~~~i~~~~~~np~G~~~~l 158 (265)
+..++++||+|+++.|+|+++. ..++..|.+++.++.+ |++++++++. +++++|++++|+||||.+.++
T Consensus 85 ~~~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~ 160 (354)
T 3ly1_A 85 IEAYASLEAQLVIPELTYGDGE----HFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPA 160 (354)
T ss_dssp HHHHCCTTCEEEEESSSCTHHH----HHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCH
T ss_pred HHHHhCCCCeEEECCCCchHHH----HHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCH
Confidence 6777899999999999999987 4445679999999977 8999999997 789999999999999999998
Q ss_pred HHHHHHHHH--cCCEEEEeCCcCCCCCc----CCC----CC-CccEEEeccccccccCCCceeeEEEeechhHHHHHHHH
Q 024619 159 RKIAEMAHA--HGALLLVDNSIMSPVLS----RPL----EL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 227 (265)
Q Consensus 159 ~~i~~~a~~--~~~~li~D~~~~~~~~~----~~~----~~-~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~ 227 (265)
+++.++++. +|+++|+||+|+..... ... .. +.+++++|+||++ |.+|+++|+++.+++.+ +.+...
T Consensus 161 ~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~~-~~~~~~ 238 (354)
T 3ly1_A 161 DVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIH-AMAGMRVGYAVAHPTVI-ALMGRY 238 (354)
T ss_dssp HHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTT-CCGGGCCEEEECCHHHH-HHHGGG
T ss_pred HHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhc-cChhhhheeeecCHHHH-HHHHHh
Confidence 888777777 99999999999854432 111 22 6779999999999 66789999998865433 322222
Q ss_pred HHhccCCCChhHHHHHHhccCc
Q 024619 228 QNAEGSGLAPFDCWICLRGVKT 249 (265)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~l~~ 249 (265)
.. ....++.....+...++.
T Consensus 239 ~~--~~~~~~~~~~a~~~~l~~ 258 (354)
T 3ly1_A 239 VA--GEKINFSGVDAALASMND 258 (354)
T ss_dssp TT--CSCCCHHHHHHHHHHTTC
T ss_pred cC--CCCCCHHHHHHHHHHhcC
Confidence 22 245566666655555554
No 48
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.92 E-value=3e-24 Score=189.11 Aligned_cols=188 Identities=20% Similarity=0.204 Sum_probs=142.2
Q ss_pred CCccCCC-CCh-hHHHHHHHHHhHhCC----C-ceEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCC
Q 024619 46 PYDYTRS-GNP-TRDALESLLAKLDKA----D-RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (265)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~-~~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~ 117 (265)
...|+.. |.+ +++++++++.+.+|. + +++++++|++|+. ++..++++||+|++++|+|+++.. .++..
T Consensus 55 ~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~----~~~~~ 130 (411)
T 2o0r_A 55 VNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSP----VVAMA 130 (411)
T ss_dssp CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH----HHHHT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH----HHHHc
Confidence 4567665 554 588888888888773 2 4555555568986 667788999999999999999874 34567
Q ss_pred CeEEEeecC--------CCHHHHHhhcCCCceEEEEecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc--
Q 024619 118 GVVVKRVNT--------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-- 184 (265)
Q Consensus 118 g~~~~~~~~--------~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~-- 184 (265)
|.+++.++. .|++++++++.+++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|+.+.+.
T Consensus 131 g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~ 210 (411)
T 2o0r_A 131 GAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHA 210 (411)
T ss_dssp TCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC
T ss_pred CCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence 888888875 4799999999888999999999999999976 599999999999999999999865431
Q ss_pred ---CCC----CCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhH
Q 024619 185 ---RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 239 (265)
Q Consensus 185 ---~~~----~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (265)
... ..+.|+++.|+||++ +++|+|+|+++++++. .+.+...........++..
T Consensus 211 ~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~-~~~l~~~~~~~~~~~~~~~ 270 (411)
T 2o0r_A 211 RHLPLAGFDGMAERTITISSAAKMF-NCTGWKIGWACGPAEL-IAGVRAAKQYLSYVGGAPF 270 (411)
T ss_dssp CCCCGGGSTTTGGGEEEEEEHHHHT-TCTTTCEEEEECCHHH-HHHHHHHHHHHTSCCCTTH
T ss_pred CCcChhhccCCCCCEEEEeechhhc-CCccceEEEEeeCHHH-HHHHHHHHhhccCCCChHH
Confidence 111 146799999999999 6778999999987644 4444444333333334333
No 49
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.92 E-value=1.2e-24 Score=192.00 Aligned_cols=225 Identities=18% Similarity=0.167 Sum_probs=158.6
Q ss_pred eEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCCC-----ceEEecchHHHHH
Q 024619 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKAD-----RALCFTSGMAALA 84 (265)
Q Consensus 12 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~-----~~i~~~~g~~al~ 84 (265)
.+|+|+ .++. +..++|.+..+...... .....+.|++. |.+ +++++++++.+.+|.+ +++++++|++++.
T Consensus 29 ~~i~l~-~g~~-~~~~~~~v~~a~~~~~~-~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~ 105 (422)
T 3fvs_A 29 DVVNLG-QGFP-DFPPPDFAVEAFQHAVS-GDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALF 105 (422)
T ss_dssp CCEECC-CSSC-SSCCCHHHHHHHHHHHH-SCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHH
T ss_pred CceEeC-CCCC-CCCCCHHHHHHHHHHHh-CCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHH
Confidence 578998 4442 22233433332211111 00013567776 665 5899999999888753 3455555568986
Q ss_pred -HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC-----------------CCHHHHHhhcCCCceEEEEe
Q 024619 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----------------CDLDEVASAIGPWTKLVWVE 146 (265)
Q Consensus 85 -~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----------------~d~~~l~~~~~~~~~~i~~~ 146 (265)
++..++++||+|+++.|+|+++.. .++..|.+++.++. .|++++++++.+++++|+++
T Consensus 106 ~~~~~~~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~ 181 (422)
T 3fvs_A 106 TAFQALVDEGDEVIIIEPFFDCYEP----MTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLN 181 (422)
T ss_dssp HHHHHHCCTTCEEEEEESCCTTHHH----HHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEE
T ss_pred HHHHHHcCCCCEEEEcCCCchhhHH----HHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceEEEEC
Confidence 677788999999999999999874 44557888887764 37899999999899999999
Q ss_pred cCCCCccccc---cHHHHHHHHHHcCCEEEEeCCcCCCCCc-----CC----CCCCccEEEeccccccccCCCceeeEEE
Q 024619 147 SPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS-----RP----LELGADIVMHSATKFIAGHSDVMAGVLA 214 (265)
Q Consensus 147 ~~~np~G~~~---~l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~----~~~~~di~~~s~sK~~~g~~g~~~G~v~ 214 (265)
+|+||||.+. ++++|+++|+++|+++|+||+|+...+. .. ...+.++++.|+||++ |++|++.|+++
T Consensus 182 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G~~~ 260 (422)
T 3fvs_A 182 TPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTF-SATGWKVGWVL 260 (422)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHH-TCGGGCCEEEE
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhcc-CCccceEEEEE
Confidence 9999999998 5899999999999999999999854331 11 1235679999999999 67789999998
Q ss_pred eechhHHHHHHHHHHhccCCCChhHHHHHHh
Q 024619 215 VKGERLAKELYFLQNAEGSGLAPFDCWICLR 245 (265)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (265)
.+++.+ +.+...........++..+..+..
T Consensus 261 ~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~ 290 (422)
T 3fvs_A 261 GPDHIM-KHLRTVHQNSVFHCPTQSQAAVAE 290 (422)
T ss_dssp CCHHHH-HHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred eCHHHH-HHHHHHHhhccCCCCcHHHHHHHH
Confidence 877544 434444444444555555444333
No 50
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.92 E-value=2.1e-24 Score=188.52 Aligned_cols=219 Identities=19% Similarity=0.219 Sum_probs=155.8
Q ss_pred eEeeccCCCCC-CCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCC----C-ceEEecchHHHH
Q 024619 12 LLMNFSNEFDP-YGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA----D-RALCFTSGMAAL 83 (265)
Q Consensus 12 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~-~~i~~~~g~~al 83 (265)
.+++|+ .+.+ ++ ++|.+........ ......|+.. |.+ +++++.+++++.+|. + .++++++|++++
T Consensus 31 ~~i~l~-~~~~~~~--~~~~v~~a~~~~~---~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~ 104 (386)
T 1u08_A 31 QAINLS-QGFPDFD--GPRYLQERLAHHV---AQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEAL 104 (386)
T ss_dssp TCEECC-CSSCSSC--CCHHHHHHHHHHH---HTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHH
T ss_pred CeEEec-CCCCCCC--CCHHHHHHHHHHH---HhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHH
Confidence 478888 4443 23 3343333221111 1123567666 665 588888888887773 2 455555666898
Q ss_pred H-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC------CCHHHHHhhcCCCceEEEEecCCCCccccc
Q 024619 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------CDLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (265)
Q Consensus 84 ~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~~~~~~~~i~~~~~~np~G~~~ 156 (265)
. ++..++++||+|++++|+|+++.. .++..|.+++.++. .|++++++++.+++++|++++|+||||.+.
T Consensus 105 ~~~~~~~~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 180 (386)
T 1u08_A 105 YAAITALVRNGDEVICFDPSYDSYAP----AIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVW 180 (386)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHHH----HHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCC
T ss_pred HHHHHHhCCCCCEEEEeCCCchhHHH----HHHHcCCEEEEeecCcccCcCCHHHHHHhhcccCEEEEEeCCCCCCCccC
Confidence 6 667778999999999999999874 44567888888875 379999999988899999999999999997
Q ss_pred c---HHHHHHHHHHcCCEEEEeCCcCCCCCc-----CCC----CCCccEEEeccccccccCCCceeeEEEeechhHHHHH
Q 024619 157 D---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (265)
Q Consensus 157 ~---l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~~----~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~ 224 (265)
+ +++|+++|+++|+++|+||+|+...+. ... ..+.|+++.|+||++ +++|+|+|+++++++ +.+.+
T Consensus 181 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~-~~~~l 258 (386)
T 1u08_A 181 QQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTY-HMTGWKVGYCVAPAP-ISAEI 258 (386)
T ss_dssp CHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHT-TCGGGCCEEEECCHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhc-CCcccceEEEEcCHH-HHHHH
Confidence 5 799999999999999999999864331 111 236799999999999 667899999998765 44444
Q ss_pred HHHHHhccCCCChhHHHH
Q 024619 225 YFLQNAEGSGLAPFDCWI 242 (265)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~ 242 (265)
...........+...+..
T Consensus 259 ~~~~~~~~~~~~~~~~~a 276 (386)
T 1u08_A 259 RKVHQYLTFSVNTPAQLA 276 (386)
T ss_dssp HHHHHHHTSSCCHHHHHH
T ss_pred HHHHHhhccCCChHHHHH
Confidence 444433344445444333
No 51
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.92 E-value=2.3e-24 Score=189.51 Aligned_cols=225 Identities=20% Similarity=0.191 Sum_probs=157.7
Q ss_pred eeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCC-----CceEEecchHHHH
Q 024619 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA-----DRALCFTSGMAAL 83 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~-----~~~i~~~~g~~al 83 (265)
..+|+|+ .++. +..++|.+..+.... ........|++. |.+ +++++++++.+.+|. +.++++++|++++
T Consensus 23 ~~~i~l~-~~~~-~~~~~~~v~~a~~~~--~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~ 98 (410)
T 3e2y_A 23 PSVVNLG-QGFP-DISPPSYVKEELSKA--AFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSL 98 (410)
T ss_dssp TTSEECS-SCCC-CSCCCHHHHHHHHHH--HTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHH
T ss_pred CCeEEec-CCCC-CCCCCHHHHHHHHHH--HhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHH
Confidence 4679998 4442 222333333322111 111123467766 664 588888888877653 3455555556888
Q ss_pred H-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC----------------CHHHHHhhcCCCceEEEEe
Q 024619 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----------------DLDEVASAIGPWTKLVWVE 146 (265)
Q Consensus 84 ~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----------------d~~~l~~~~~~~~~~i~~~ 146 (265)
. ++..++++||+|+++.|+|+.+.. .++..|.+++.++.+ |++++++++.+++++|+++
T Consensus 99 ~~~~~~~~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~ 174 (410)
T 3e2y_A 99 FNSIQGLVDPGDEVIIMVPFYDCYEP----MVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILN 174 (410)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHHH----HHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEE
T ss_pred HHHHHHhcCCCCEEEEeCCCchhhHH----HHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEe
Confidence 6 677788999999999999999974 445578888887753 8999999998899999999
Q ss_pred cCCCCccccc---cHHHHHHHHHHcCCEEEEeCCcCCCCCc-----CC----CCCCccEEEeccccccccCCCceeeEEE
Q 024619 147 SPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS-----RP----LELGADIVMHSATKFIAGHSDVMAGVLA 214 (265)
Q Consensus 147 ~~~np~G~~~---~l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~----~~~~~di~~~s~sK~~~g~~g~~~G~v~ 214 (265)
+|+||||.+. ++++|+++|+++|+++|+||+|+...+. .. ...+.++++.|+||++ |++|+++|+++
T Consensus 175 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G~~~ 253 (410)
T 3e2y_A 175 TPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTF-SVTGWKLGWSI 253 (410)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHS-SCGGGCCEEEE
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhc-CCCCceEEEEE
Confidence 9999999994 6899999999999999999999754331 11 1224669999999999 66789999998
Q ss_pred eechhHHHHHHHHHHhccCCCChhHHHHHHh
Q 024619 215 VKGERLAKELYFLQNAEGSGLAPFDCWICLR 245 (265)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (265)
.+++.+ +.+...........++..+..+..
T Consensus 254 ~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~ 283 (410)
T 3e2y_A 254 GPAHLI-KHLQTVQQNSFYTCATPLQAALAE 283 (410)
T ss_dssp CCHHHH-HHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred ECHHHH-HHHHHHHHhhccCCChHHHHHHHH
Confidence 877554 434444444445556555544333
No 52
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.92 E-value=4.3e-25 Score=192.18 Aligned_cols=229 Identities=15% Similarity=0.116 Sum_probs=154.4
Q ss_pred eeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCCC-----ceEEecchHHHH
Q 024619 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKAD-----RALCFTSGMAAL 83 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~-----~~i~~~~g~~al 83 (265)
..+++|+.....++ ++|.+........ .....+.|++. |.+ +++++++++.+.+|.+ .++++++|++++
T Consensus 25 ~~~idl~~~~~~~~--~~~~v~~a~~~~~--~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~ 100 (376)
T 2dou_A 25 VGLIDLSIGSTDLP--PPEAPLKALAEAL--NDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGL 100 (376)
T ss_dssp CCCEECSSCCCCCC--CCHHHHHHHHHHT--TCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHH
T ss_pred CCEEeccCCCCCCC--CCHHHHHHHHHHH--hCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHH
Confidence 46899983333334 3344333221111 11123456553 332 3666666666656864 344444556898
Q ss_pred H-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC-----CCHHHHHhhcCCCceEEEEecCCCCcccccc
Q 024619 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----CDLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (265)
Q Consensus 84 ~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~ 157 (265)
. ++..++++||+|+++.|+|+++... ++..|.+++.++. .|++++++++.+++++|++++|+||||.+.+
T Consensus 101 ~~~~~~l~~~gd~vl~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 176 (376)
T 2dou_A 101 AHLLLALTEPEDLLLLPEVAYPSYFGA----ARVASLRTFLIPLREDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVAD 176 (376)
T ss_dssp HHHHHHHCCTTCEEEEESSCCHHHHHH----HHHTTCEEEEECBCTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCC
T ss_pred HHHHHHhcCCCCEEEECCCCcHhHHHH----HHHcCCEEEEeeCCCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCC
Confidence 6 6777888999999999999998743 4557888888875 3678888877777899999999999999976
Q ss_pred ---HHHHHHHHHHcCCEEEEeCCcCCCCCc----CCCC----CCccEEEeccccccccCCCceeeEEEeechhHHHHHHH
Q 024619 158 ---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 226 (265)
Q Consensus 158 ---l~~i~~~a~~~~~~li~D~~~~~~~~~----~~~~----~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~ 226 (265)
+++|+++|+++|+++|+||+|+.+.+. .... .+.++++.|+||++ |.+|+++|+++.+++. .+.+..
T Consensus 177 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~-~~~l~~ 254 (376)
T 2dou_A 177 WGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSY-NLAGFRLGFALGSEEA-LARLER 254 (376)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHH-TCGGGCCEEEEECHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhc-CChhheeEEEecCHHH-HHHHHH
Confidence 688999999999999999999865431 1121 25689999999999 5678999999877644 444444
Q ss_pred HHHhccCCCChhHHHHHHhccCc
Q 024619 227 LQNAEGSGLAPFDCWICLRGVKT 249 (265)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~l~~ 249 (265)
.........++..+..+...++.
T Consensus 255 ~~~~~~~~~~~~~~~a~~~~l~~ 277 (376)
T 2dou_A 255 VKGVIDFNQYAGVLRMGVEALKT 277 (376)
T ss_dssp HHHHHCCCSCHHHHHHHHHHHTS
T ss_pred HHHhcccCCCHHHHHHHHHHHhC
Confidence 44444444565555555444443
No 53
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.92 E-value=1.2e-24 Score=192.78 Aligned_cols=199 Identities=19% Similarity=0.173 Sum_probs=141.0
Q ss_pred CcceeEeeccCCCCCC--CC-CCCCeeeccccccCCCCCCCCCccCCC-CChhHHHHHHHHHhHhC-------CCceEEe
Q 024619 8 GVSTLLMNFSNEFDPY--GA-LSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDK-------ADRALCF 76 (265)
Q Consensus 8 ~~~~~~~~~~~~~~~~--g~-~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g-------~~~~i~~ 76 (265)
.++..+|+|+ ..++. |. .++|.+..+.... ........|.+. |. .++++.++++++ .++++++
T Consensus 51 ~~~~~~i~l~-~g~~~~~g~~~~~~~v~~a~~~~--~~~~~~~~y~~~~g~---~~lr~~la~~~~~~~~~~~~~~v~~t 124 (427)
T 3dyd_A 51 NPNKTMISLS-IGDPTVFGNLPTDPEVTQAMKDA--LDSGKYNGYAPSIGF---LSSREEIASYYHCPEAPLEAKDVILT 124 (427)
T ss_dssp CTTSCCEECC-CSCTTTTSSSCCCHHHHHHHHHH--HHHCCSSSCCCTTCC---HHHHHHHHHHHCBTTBCCCGGGEEEE
T ss_pred cCCCCEEeCC-CcCCCccCCCCCCHHHHHHHHHH--HhcCcCCCCCCCCCc---HHHHHHHHHHHhhcCCCCChHHEEEe
Confidence 3445689998 55543 22 2333333322111 111123466555 54 344444454444 3356666
Q ss_pred cchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-------CHHHHHhhcCCCceEEEEecC
Q 024619 77 TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESP 148 (265)
Q Consensus 77 ~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~~~~~~~~i~~~~~ 148 (265)
++|++|+. ++..++++||+|++++|+|+.+. ..++..|.+++.++.. |++++++++.+++++|++++|
T Consensus 125 ~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p 200 (427)
T 3dyd_A 125 SGCSQAIDLCLAVLANPGQNILVPRPGFSLYK----TLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNP 200 (427)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEEESCCTHHH----HHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEEESS
T ss_pred cCcHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCEEEEECC
Confidence 66779996 67778899999999999999886 4456678888887752 899999999888999999999
Q ss_pred CCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc-----CCCCCC---ccEEEeccccccccCCCceeeEEEeec
Q 024619 149 TNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELG---ADIVMHSATKFIAGHSDVMAGVLAVKG 217 (265)
Q Consensus 149 ~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~~~~~---~di~~~s~sK~~~g~~g~~~G~v~~~~ 217 (265)
+||||.+.+ +++|+++|+++|+++|+||+|+...+. .....+ ..++++|+||.+ +.+|+|+|++++++
T Consensus 201 ~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~-~~~G~riG~~~~~~ 279 (427)
T 3dyd_A 201 SNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRW-LVPGWRLGWILIHD 279 (427)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTS-SCGGGCCEEEEEEC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccC-CCcCcceEEEEecC
Confidence 999999988 999999999999999999999854321 111222 348889999998 56789999999885
No 54
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.92 E-value=3.6e-24 Score=187.27 Aligned_cols=221 Identities=17% Similarity=0.209 Sum_probs=152.2
Q ss_pred eEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCCh-hHHHHHHHHHhHhC--CC--ceEEecchHHHHH-H
Q 024619 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNP-TRDALESLLAKLDK--AD--RALCFTSGMAALA-A 85 (265)
Q Consensus 12 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~-~~~~l~~~l~~~~g--~~--~~i~~~~g~~al~-~ 85 (265)
.+++|+ .++. +..++|.+........ ......|+..... +++++++++.+.+| .+ .++++++|++++. +
T Consensus 29 ~~i~l~-~~~~-~~~~~~~v~~a~~~~~---~~~~~~y~~~~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~ 103 (390)
T 1d2f_A 29 DLLPFT-ISDM-DFATAPCIIEALNQRL---MHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSEL 103 (390)
T ss_dssp -CEECC-SSSC-SSCCCHHHHHHHHHHH---TTCCCCCCCSCCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHH
T ss_pred CeeEee-ecCC-CCCCCHHHHHHHHHHH---hCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHH
Confidence 688998 5554 2224444433321111 1123456554345 67888888877776 33 4555555568986 6
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC--------CCHHHHHhhcCC-CceEEEEecCCCCccccc
Q 024619 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIGP-WTKLVWVESPTNPRQQIC 156 (265)
Q Consensus 86 ~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~d~~~l~~~~~~-~~~~i~~~~~~np~G~~~ 156 (265)
+..++++||+|+++.|+|+++... ++..|.+++.++. .|++++++++.+ ++++|++++|+||||.+.
T Consensus 104 ~~~l~~~gd~vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~ 179 (390)
T 1d2f_A 104 IRQWSETGEGVVIHTPAYDAFYKA----IEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVW 179 (390)
T ss_dssp HHHSSCTTCEEEEEESCCHHHHHH----HHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCC
T ss_pred HHHhcCCCCEEEEcCCCcHHHHHH----HHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCc
Confidence 777789999999999999988744 3556888888875 479999999875 799999999999999997
Q ss_pred c---HHHHHHHHHHcCCEEEEeCCcCCCCCc-----CCCCC--Cc-cEEEeccccccccCCCceeeEEEeechhHHHHHH
Q 024619 157 D---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLEL--GA-DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 225 (265)
Q Consensus 157 ~---l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~~~~--~~-di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~ 225 (265)
+ +++|+++|+++|+++|+||+|+...+. ..... +. |. +.|+||++ |++|+++|+++++++.+.+.+.
T Consensus 180 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~ 257 (390)
T 1d2f_A 180 TCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSF-NIPALTGAYGIIENSSSRDAYL 257 (390)
T ss_dssp CTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHH-TCGGGCCEEEEECSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhh-cccChhheEEEECCHHHHHHHH
Confidence 6 899999999999999999999865432 11122 22 67 99999999 6678999999987555555444
Q ss_pred HHHH-hcc-CCCChhHHHHH
Q 024619 226 FLQN-AEG-SGLAPFDCWIC 243 (265)
Q Consensus 226 ~~~~-~~~-~~~~~~~~~~~ 243 (265)
.... ... ...++..++.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~a~ 277 (390)
T 1d2f_A 258 SALKGRDGLSSPSVLALTAH 277 (390)
T ss_dssp HHHHTTSCCCSCCHHHHHHH
T ss_pred HHHhhhcccCCCCHHHHHHH
Confidence 4433 223 24455544433
No 55
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.92 E-value=2.2e-24 Score=189.31 Aligned_cols=198 Identities=13% Similarity=0.077 Sum_probs=141.1
Q ss_pred eEeeccCCCCCCCC-CCCCeeeccccccCCC-CCCCCCccCCC-CCh-hHHHHHHHHHhHhC----CCceEE--ecchHH
Q 024619 12 LLMNFSNEFDPYGA-LSTPLYQTATFKQPSA-TENGPYDYTRS-GNP-TRDALESLLAKLDK----ADRALC--FTSGMA 81 (265)
Q Consensus 12 ~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~-~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g----~~~~i~--~~~g~~ 81 (265)
.+|+|+ .+.|+.. .++++........... .....+.|.+. |.+ +++++++++...+| .+++++ +++|++
T Consensus 29 ~~i~l~-~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~ 107 (401)
T 7aat_A 29 KKMNLG-VGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTG 107 (401)
T ss_dssp TCEECC-CCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred Cceeee-eeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchH
Confidence 379999 7887433 3444322221100001 11246678776 776 48888888887765 455554 555668
Q ss_pred HHH-HHHHh---cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-------CHHHHHhhc---CCCceEEEEec
Q 024619 82 ALA-AVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAI---GPWTKLVWVES 147 (265)
Q Consensus 82 al~-~~~~~---~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~~---~~~~~~i~~~~ 147 (265)
++. ++..+ +++||+|++++|+|+.+... ++..|.+++.++.+ |++++++.+ .++++++++++
T Consensus 108 al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~ 183 (401)
T 7aat_A 108 SLRVGANFLQRFFKFSRDVYLPKPSWGNHTPI----FRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHAC 183 (401)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEEESCCTTHHHH----HHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESS
T ss_pred HHHHHHHHHHHhccCCCEEEEcCCCchhHHHH----HHHcCCeeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCC
Confidence 886 43333 48999999999999999744 45678888888753 566555544 46789999999
Q ss_pred CCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCcCC-----------CCCCccEEEeccccccccCCCceeeEE
Q 024619 148 PTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSRP-----------LELGADIVMHSATKFIAGHSDVMAGVL 213 (265)
Q Consensus 148 ~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~~~-----------~~~~~di~~~s~sK~~~g~~g~~~G~v 213 (265)
|+||||.+.+ +++|+++|++||+++|+||+|....+... ...+.++++.|+||.+ |++|+|.|++
T Consensus 184 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~RiG~l 262 (401)
T 7aat_A 184 AHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNM-GLYGERAGAF 262 (401)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTS-CCGGGCEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCccc-ccccCceEEE
Confidence 9999998854 78999999999999999999976554311 2235679999999999 7789999998
Q ss_pred Ee
Q 024619 214 AV 215 (265)
Q Consensus 214 ~~ 215 (265)
+.
T Consensus 263 ~~ 264 (401)
T 7aat_A 263 TV 264 (401)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 56
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.92 E-value=1.3e-24 Score=189.00 Aligned_cols=224 Identities=15% Similarity=0.086 Sum_probs=159.7
Q ss_pred eEeeccCCCCC-CCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCC----CceEEecchHHHHH
Q 024619 12 LLMNFSNEFDP-YGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALA 84 (265)
Q Consensus 12 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~g~~al~ 84 (265)
.+|+|+ +++. ++ +||.+..+. . ... .....|++. |.+ +++++++++++.+|. +.++++++|++++.
T Consensus 24 ~~i~l~-~~~~~~~--~~~~v~~a~-~-~~~--~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~ 96 (376)
T 3ezs_A 24 RGLDLG-IGEPQFE--TPKFIQDAL-K-NHT--HSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLF 96 (376)
T ss_dssp CCCBCS-SCCCCSC--CCHHHHHHH-H-TTG--GGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHH
T ss_pred CEEEeC-CCCCCCC--CCHHHHHHH-H-Hhh--hhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHH
Confidence 789998 4443 33 333333322 1 111 234567776 665 599999999988885 24666666679986
Q ss_pred -HHHHhcCC--CCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHH----HHHhhcCCCceEEEEecCCCCcccccc
Q 024619 85 -AVTHLLGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLD----EVASAIGPWTKLVWVESPTNPRQQICD 157 (265)
Q Consensus 85 -~~~~~~~~--g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~----~l~~~~~~~~~~i~~~~~~np~G~~~~ 157 (265)
++..++++ ||+|+++.|+|+++. ..++..|.+++.++.++.+ ++++++.+++++|++++|+||||.+.+
T Consensus 97 ~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~ 172 (376)
T 3ezs_A 97 NFPSFVLFDYQNPTIAYPNPFYQIYE----GAAKFIKAKSLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLS 172 (376)
T ss_dssp HHHHHHTTTCSSCEEEEEESCCTHHH----HHHHHTTCEEEEEECCGGGTSCCCCCHHHHHHCSEEEECSSCTTTCCCCC
T ss_pred HHHHHHcCCCCCCEEEEecCCcHhHH----HHHHHcCCEEEEcccCCCCCcchhHHhhhccCCCEEEEcCCCCCcCCCCC
Confidence 67788899 999999999999887 4456678999998876432 455556567899999999999999976
Q ss_pred ---HHHHHHHHHHcCCEEEEeCCcCCCCCc----CCC---------CCCccEEEeccccccccCCCceeeEEEeechhHH
Q 024619 158 ---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPL---------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 221 (265)
Q Consensus 158 ---l~~i~~~a~~~~~~li~D~~~~~~~~~----~~~---------~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~ 221 (265)
+++|+++|+++|+++|+||+|+..... ... ..+.++++.|+||++ |.+|++.|+++.+++ +.
T Consensus 173 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~-~~ 250 (376)
T 3ezs_A 173 LEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRS-SAPGLRSGFIAGDSR-LL 250 (376)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTT-TCGGGCCEEEEECHH-HH
T ss_pred HHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhcc-CCccceeEEEeeCHH-HH
Confidence 678888899999999999999864432 111 356789999999999 667899999987654 44
Q ss_pred HHHHHHHHhccCCCChhHHHHHHhccC
Q 024619 222 KELYFLQNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (265)
+.+...........++..+..+...++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~a~~~~l~ 277 (376)
T 3ezs_A 251 EKYKAFRAYLGYTSANAIQKASEAAWL 277 (376)
T ss_dssp HHHHHHHTTTCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcCCCChHHHHHHHHHHh
Confidence 545444444455566665555444443
No 57
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.92 E-value=7.8e-25 Score=189.60 Aligned_cols=218 Identities=15% Similarity=0.195 Sum_probs=153.5
Q ss_pred eEeeccCCCCC-CCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCC--ceEEecchHHHHH-HHH
Q 024619 12 LLMNFSNEFDP-YGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALA-AVT 87 (265)
Q Consensus 12 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~--~~i~~~~g~~al~-~~~ 87 (265)
.+|+|+ ++++ ++ ++|.+..+. .. ... ....|+. +...++++.+++++|.+ .++++++|++++. ++.
T Consensus 33 ~~i~l~-~~~~~~~--~~~~v~~a~-~~-~~~--~~~~y~~---~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~ 102 (363)
T 3ffh_A 33 KITKLS-SNENPLG--TSKKVAAIQ-AN-SSV--ETEIYPD---GWASSLRKEVADFYQLEEEELIFTAGVDELIELLTR 102 (363)
T ss_dssp CCEECS-SCSCTTC--CCHHHHHHH-HT-CBS--CCCBC-------CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHH
T ss_pred ceEEcc-CCCCCCC--CCHHHHHHH-HH-HHH--HhhcCCC---cchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHH
Confidence 579999 5533 33 333333322 11 111 2334432 34577888888888864 4556666678986 667
Q ss_pred HhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-----CHHHHHhhcCCCceEEEEecCCCCccccccHHHHH
Q 024619 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 162 (265)
Q Consensus 88 ~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~ 162 (265)
.++++||+|+++.|+|+++. ..++..|.+++.++.+ |++++++++.+++++|++++|+||||.+.|++++.
T Consensus 103 ~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~ 178 (363)
T 3ffh_A 103 VLLDTTTNTVMATPTFVQYR----QNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQ 178 (363)
T ss_dssp HHCSTTCEEEEEESSCHHHH----HHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred HHccCCCEEEEcCCChHHHH----HHHHHcCCEEEEecCCCCCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHH
Confidence 78899999999999998886 4446678999999877 89999999999999999999999999999999999
Q ss_pred HHHHHc--CCEEEEeCCcCCCCCc-------CCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccC
Q 024619 163 EMAHAH--GALLLVDNSIMSPVLS-------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 233 (265)
Q Consensus 163 ~~a~~~--~~~li~D~~~~~~~~~-------~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~ 233 (265)
++++.+ |+++|+||+|+....+ .....+.++++.|+||++ |++|+++|+++.+++.+ +.+.... ...
T Consensus 179 ~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~~-~~l~~~~--~~~ 254 (363)
T 3ffh_A 179 AFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIY-GLASARVGYGIADKEII-RQLNIVR--PPF 254 (363)
T ss_dssp HHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTT-CCSSCCCEEEEECHHHH-HHHHHTC--CSC
T ss_pred HHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhh-cCchhceeeeecCHHHH-HHHHHhC--CCC
Confidence 998888 9999999999843321 112235679999999999 67789999999865443 3333222 233
Q ss_pred CCChhHHHHHHhcc
Q 024619 234 GLAPFDCWICLRGV 247 (265)
Q Consensus 234 ~~~~~~~~~~~~~l 247 (265)
..++..++.+...+
T Consensus 255 ~~~~~~~~~~~~~l 268 (363)
T 3ffh_A 255 NTTSIGQKLAIEAI 268 (363)
T ss_dssp CCBHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh
Confidence 45555555544444
No 58
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.92 E-value=6.7e-24 Score=187.87 Aligned_cols=194 Identities=20% Similarity=0.260 Sum_probs=145.8
Q ss_pred CccCCC-CCh-hHHHHHHHHHhHhCCC----------ceEEecch-HHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHh
Q 024619 47 YDYTRS-GNP-TRDALESLLAKLDKAD----------RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSR 112 (265)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~~----------~~i~~~~g-~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~ 112 (265)
..|++. |.+ +++++++++++.+|.+ +.+++++| ++++. ++..++++||+|++++|+|+.+. .
T Consensus 72 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~ 147 (425)
T 2r2n_A 72 LQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTL----Q 147 (425)
T ss_dssp TSCCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHH----H
T ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH----H
Confidence 568777 886 5999999999988753 35666666 58886 67778999999999999999887 4
Q ss_pred hcCCCCeEEEeecCC----CHHHHHhhcC------------CCceEEEE-ecCCCCccccccH---HHHHHHHHHcCCEE
Q 024619 113 VTPKTGVVVKRVNTC----DLDEVASAIG------------PWTKLVWV-ESPTNPRQQICDI---RKIAEMAHAHGALL 172 (265)
Q Consensus 113 ~~~~~g~~~~~~~~~----d~~~l~~~~~------------~~~~~i~~-~~~~np~G~~~~l---~~i~~~a~~~~~~l 172 (265)
.++..|.+++.++.+ |++++++++. +++++|++ ++|+||||.+.+. ++|+++|++||+++
T Consensus 148 ~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~l 227 (425)
T 2r2n_A 148 SLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLI 227 (425)
T ss_dssp HHGGGTCEEEEECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHcCCEEEEeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEE
Confidence 456788999888753 7888988876 35788866 7899999999864 59999999999999
Q ss_pred EEeCCcCCCCCc-----CCC---CCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHHH
Q 024619 173 LVDNSIMSPVLS-----RPL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 244 (265)
Q Consensus 173 i~D~~~~~~~~~-----~~~---~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (265)
|+||+|+...+. ... ..+.+++++|+||++ + +|+|+|+++++++.+ +.+...........+...+..+.
T Consensus 228 i~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~-~-~GlRiG~~~~~~~l~-~~l~~~~~~~~~~~~~~~q~a~~ 304 (425)
T 2r2n_A 228 IEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKII-S-SGLRIGFLTGPKPLI-ERVILHIQVSTLHPSTFNQLMIS 304 (425)
T ss_dssp EEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTT-C-STTCCEEEEEEHHHH-HHHHHHHHTTTCSSCHHHHHHHH
T ss_pred EEECCcccccCCCCCCCCccccCCCCCEEEEccchhhc-c-CccceEEEecCHHHH-HHHHHHHHHhcCCCCHHHHHHHH
Confidence 999999743221 111 234679999999999 5 789999999887544 44444444444555655554444
Q ss_pred hcc
Q 024619 245 RGV 247 (265)
Q Consensus 245 ~~l 247 (265)
+.|
T Consensus 305 ~~l 307 (425)
T 2r2n_A 305 QLL 307 (425)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 59
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.92 E-value=2.9e-24 Score=190.20 Aligned_cols=222 Identities=19% Similarity=0.214 Sum_probs=155.0
Q ss_pred eEeeccCCCCC-CCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCC----C-ceEEecchHHHH
Q 024619 12 LLMNFSNEFDP-YGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA----D-RALCFTSGMAAL 83 (265)
Q Consensus 12 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~-~~i~~~~g~~al 83 (265)
.+|+|+ .+.+ ++ ++|.+.................|++. |.+ +++++.+++.+.+|. + .++++++|++++
T Consensus 38 ~~i~l~-~~~~~~~--~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~ 114 (429)
T 1yiz_A 38 KPLNLG-QGFPDYH--APKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEAL 114 (429)
T ss_dssp CCEECC-SSSCSSC--CCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHH
T ss_pred CEEEec-CCCCCCC--CCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHH
Confidence 578998 4433 33 33433332211111111123567766 665 588888888887773 2 344555556898
Q ss_pred H-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC---------------CCHHHHHhhcCCCceEEEEec
Q 024619 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---------------CDLDEVASAIGPWTKLVWVES 147 (265)
Q Consensus 84 ~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~---------------~d~~~l~~~~~~~~~~i~~~~ 147 (265)
. ++..++++||+|+++.|+|+.+... ++..|.+++.++. .|++++++++.+++++|++++
T Consensus 115 ~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 190 (429)
T 1yiz_A 115 YATIQGHVDEGDEVIIIEPFFDCYEPM----VKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINT 190 (429)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEES
T ss_pred HHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECC
Confidence 6 6677789999999999999999744 3456888887764 378999999988899999999
Q ss_pred CCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc-----CC--C--CCCccEEEeccccccccCCCceeeEEEe
Q 024619 148 PTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RP--L--ELGADIVMHSATKFIAGHSDVMAGVLAV 215 (265)
Q Consensus 148 ~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~--~--~~~~di~~~s~sK~~~g~~g~~~G~v~~ 215 (265)
|+||||.+.+ +++|+++|++||+++|+||+|+...+. .. . ..+.|+++.|+||++ +++|+|+|++++
T Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~-~~~G~r~G~~~~ 269 (429)
T 1yiz_A 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTF-SLTGWKIGWAYG 269 (429)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHH-TCGGGCCEEEES
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhcc-CCCCcceEEEEe
Confidence 9999999974 899999999999999999999853321 11 1 346799999999999 667899999998
Q ss_pred echhHHHHHHHHHHhccCCCChhHHHH
Q 024619 216 KGERLAKELYFLQNAEGSGLAPFDCWI 242 (265)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (265)
+++ +.+.+...........++..+..
T Consensus 270 ~~~-~~~~l~~~~~~~~~~~~~~~~~a 295 (429)
T 1yiz_A 270 PEA-LLKNLQMVHQNCVYTCATPIQEA 295 (429)
T ss_dssp CHH-HHHHHHHHHHTTTCCCCHHHHHH
T ss_pred CHH-HHHHHHHHHhhcccCCChHHHHH
Confidence 765 44444444433344455444433
No 60
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.92 E-value=3e-25 Score=192.40 Aligned_cols=222 Identities=13% Similarity=0.184 Sum_probs=154.9
Q ss_pred eeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCC--ceEEecchHHHHH-HHH
Q 024619 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALA-AVT 87 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~--~~i~~~~g~~al~-~~~ 87 (265)
..+|+|+...++++ ++|.+..+...... ....|+.... .++++.+++++|.+ .++++++|++++. ++.
T Consensus 30 ~~~i~l~~~~~~~~--~~~~v~~a~~~~~~----~~~~y~~~~~---~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~ 100 (365)
T 3get_A 30 KEVIKLASNENPFG--TPPKAIECLRQNAN----KAHLYPDDSM---IELKSTLAQKYKVQNENIIIGAGSDQVIEFAIH 100 (365)
T ss_dssp SCCEECSSCCCTTC--SCHHHHHHHHHHGG----GTTSCCCTTC---HHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHH
T ss_pred CceEEecCCCCCCC--CCHHHHHHHHHHHH----hhccCCCCCh---HHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH
Confidence 45899993323344 33333332211111 2344544422 57888888888865 4566666678986 677
Q ss_pred HhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC-----CCHHHHHhhcCCCceEEEEecCCCCccccccHHHHH
Q 024619 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 162 (265)
Q Consensus 88 ~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~ 162 (265)
.++++||+|+++.|+|+.+.. .++..|.+++.++. .|++++++++.+++++|++++|+||||.+.+++++.
T Consensus 101 ~l~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~ 176 (365)
T 3get_A 101 SKLNSKNAFLQAGVTFAMYEI----YAKQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEAT 176 (365)
T ss_dssp HHCCTTCEEEECSSCCTHHHH----HHHHHTCEEEECSSSSCCHHHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred HHhCCCCEEEEeCCChHHHHH----HHHHcCCEEEEEecCCCCCCCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHH
Confidence 788999999999999998874 44567899999997 478899999999999999999999999999988888
Q ss_pred HHHH--HcCCEEEEeCCcCCCCC-------cCC----CCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHH
Q 024619 163 EMAH--AHGALLLVDNSIMSPVL-------SRP----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 229 (265)
Q Consensus 163 ~~a~--~~~~~li~D~~~~~~~~-------~~~----~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~ 229 (265)
++++ ++|+++|+||+|+...+ ... ...+.+++++|+||++ |.+|++.|+++++++ +.+.+.....
T Consensus 177 ~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~-~~~~~~~~~~ 254 (365)
T 3get_A 177 EFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLY-GLGGLRIGYGIANAN-IISAFYKLRA 254 (365)
T ss_dssp HHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTT-SCTTTCCEEEEECHH-HHHHHHHHSC
T ss_pred HHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHh-cCcchheEEEEcCHH-HHHHHHHhcC
Confidence 8887 67999999999984331 111 1236789999999999 667899999998554 4343333222
Q ss_pred hccCCCChhHHHHHHhccCc
Q 024619 230 AEGSGLAPFDCWICLRGVKT 249 (265)
Q Consensus 230 ~~~~~~~~~~~~~~~~~l~~ 249 (265)
....++..++.+...++.
T Consensus 255 --~~~~~~~~~~~~~~~l~~ 272 (365)
T 3get_A 255 --PFNVSNLALKAAVAAMDD 272 (365)
T ss_dssp --TTCSCHHHHHHHHHHHTC
T ss_pred --CCCcCHHHHHHHHHHhCC
Confidence 234555555555554443
No 61
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.92 E-value=2.8e-24 Score=184.11 Aligned_cols=195 Identities=15% Similarity=0.171 Sum_probs=143.5
Q ss_pred CcceeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCC-ceEEecchH-HHHHH
Q 024619 8 GVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSGM-AALAA 85 (265)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~-~~i~~~~g~-~al~~ 85 (265)
.....+|+|++..++++ ++|.+......... ....|+ .+...++++.+++++|.+ +.+++++|+ +++.+
T Consensus 13 ~~~~~~i~l~~n~~~~~--~~~~v~~a~~~~~~----~~~~y~---~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~ 83 (337)
T 3p1t_A 13 RAAAQAVCLAFNENPEA--VEPRVQAAIAAAAA----RINRYP---FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDR 83 (337)
T ss_dssp -CCCCCEECSSCCCCSC--CCHHHHHHHHHHGG----GTTSCC---TTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHH
T ss_pred cCCCCceEeeCCCCCCC--CCHHHHHHHHHhhh----hhccCC---CCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHH
Confidence 34456899994335666 33444333211111 133442 356888999999999987 466666665 88875
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-----CHHHHHhhcCCCceEEEEecCCCCccccccHHH
Q 024619 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (265)
Q Consensus 86 ~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~ 160 (265)
+...+ +||+|++++|+|+++. ..++..|.+++.++.+ |++++++. .+++++++++|+||||.+.|+++
T Consensus 84 ~~~~~-~gd~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~~~ 156 (337)
T 3p1t_A 84 ISAEF-SSMRFVTAWPGFDGYR----ARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGE 156 (337)
T ss_dssp HHHHS-TTSEEEEESSSCSHHH----HHHTTSCCEEEEECBCTTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCHHH
T ss_pred HHHhc-CCCeEEEeCCCcHHHH----HHHHHcCCEEEEecCCCCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCHHH
Confidence 55545 9999999999999987 5557789999998854 78888876 46899999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCCcCCCCCc---CCCCCCccEEEeccccccccCCCceeeEEEeechhH
Q 024619 161 IAEMAHAHGALLLVDNSIMSPVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 161 i~~~a~~~~~~li~D~~~~~~~~~---~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
+.++|++++. +|+||+|+..... .....+.+++++|+||++ |++|+++|+++.+++.+
T Consensus 157 l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G~~~~~~~~~ 217 (337)
T 3p1t_A 157 LDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSY-GLAGLRLGALFGPSELI 217 (337)
T ss_dssp HHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTT-CCTTTCCEEEECCHHHH
T ss_pred HHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEeeCchhc-cCcchheEEEEeCHHHH
Confidence 9999999997 5669999742221 122335789999999999 77889999998876544
No 62
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.92 E-value=1.8e-23 Score=184.02 Aligned_cols=226 Identities=15% Similarity=0.139 Sum_probs=153.1
Q ss_pred eeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhC----CCce--EEecchHHH
Q 024619 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDK----ADRA--LCFTSGMAA 82 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g----~~~~--i~~~~g~~a 82 (265)
..+|+|+ +++|++..++|.+..... .. .....+.|.+. |.+ +++++++++....+ .+++ +.+.+|+++
T Consensus 41 ~~~i~l~-~g~~~d~~~~~~v~~a~~-~a--~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga 116 (409)
T 4eu1_A 41 KRKVNLS-IGVYRDDADQPFVLECVK-QA--TLGTNMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGA 116 (409)
T ss_dssp SSCEECC-CSSCCCTTSCCCCCHHHH-TC--CCCSCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHH
T ss_pred cCceeee-eeEEECCCCCEeecHHHH-hc--CccccccCCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHH
Confidence 3579999 888855555554443321 21 33355678766 665 47777776643222 2233 336666677
Q ss_pred HHH----HHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-------CHHHHHhhcC---CCceEEEEecC
Q 024619 83 LAA----VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG---PWTKLVWVESP 148 (265)
Q Consensus 83 l~~----~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~~~---~~~~~i~~~~~ 148 (265)
+.+ +..++++||+|++++|+|+++. ..++..|.+++.++.. |++++++.+. ++++++++++|
T Consensus 117 ~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p 192 (409)
T 4eu1_A 117 LRIGGDLLNRFVANCNRIYGPDVGYPNHE----SIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACA 192 (409)
T ss_dssp HHHHHHHGGGTSSSCCEEEEESSCCTHHH----HHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSS
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCcHhHH----HHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCC
Confidence 643 2345688999999999999997 4445678999998862 7899998884 35677788999
Q ss_pred CCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCcC-----------CCCCCccEEEeccccccccCCCceeeEE-
Q 024619 149 TNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-----------PLELGADIVMHSATKFIAGHSDVMAGVL- 213 (265)
Q Consensus 149 ~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~~-----------~~~~~~di~~~s~sK~~~g~~g~~~G~v- 213 (265)
+||||.+.+ +++|+++|+++|+++|+||+|+...+.. ....+.+++++|+||.+ |.+|+|.|++
T Consensus 193 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~riG~~~ 271 (409)
T 4eu1_A 193 HNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNF-GLYGHRCGALH 271 (409)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTS-SCGGGCCEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccc-cCccCCceEEE
Confidence 999999976 5669999999999999999998654431 01234568999999999 6778999997
Q ss_pred -Eeechh----HHHHHHHHHHhccCCCChhHHHHHHh
Q 024619 214 -AVKGER----LAKELYFLQNAEGSGLAPFDCWICLR 245 (265)
Q Consensus 214 -~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (265)
+..+.. +.+.+...........+...++.+..
T Consensus 272 ~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (409)
T 4eu1_A 272 ISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSS 308 (409)
T ss_dssp EECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHH
Confidence 566554 43434443334444555554444333
No 63
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.92 E-value=1.6e-24 Score=190.73 Aligned_cols=227 Identities=15% Similarity=0.078 Sum_probs=157.0
Q ss_pred ceeEeeccCCCCC-CCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCCC----ceEEec-chHH
Q 024619 10 STLLMNFSNEFDP-YGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKAD----RALCFT-SGMA 81 (265)
Q Consensus 10 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~----~~i~~~-~g~~ 81 (265)
+..+|+|+ ++++ ++ ++|.+........ .......|++. |.+ +++++++++++.+|.+ +.++++ +|++
T Consensus 46 g~~~idl~-~g~~~~~--~~~~v~~a~~~~~--~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~ 120 (404)
T 2o1b_A 46 PLPLINMA-VGIPDGP--TPQGIIDHFQKAL--TIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKN 120 (404)
T ss_dssp SSCCEECC-CCSCSSC--CCHHHHHHHHHHT--TCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHH
T ss_pred CCCEEecC-CcCCCCC--CCHHHHHHHHHHH--hCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHH
Confidence 34589998 4443 33 3343333221111 11113457764 665 5888888888877853 344444 5568
Q ss_pred HHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC------CHHHHHhhcCCCceEEEEecCCCCccc
Q 024619 82 ALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQ 154 (265)
Q Consensus 82 al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~------d~~~l~~~~~~~~~~i~~~~~~np~G~ 154 (265)
++. ++..++++||+|+++.|+|+++... ++..|.+++.++.+ |++++++++.+++++|++++|+||||.
T Consensus 121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~ 196 (404)
T 2o1b_A 121 GLVAVPTCVINPGDYVLLPDPGYTDYLAG----VLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGS 196 (404)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCSSHHHH----HHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCC
T ss_pred HHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHCCCEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCCCc
Confidence 886 6777889999999999999999744 35568888888753 678888877777899999999999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc----CCCCC----CccEEEeccccccccCCCceeeEEEeechhHHHH
Q 024619 155 ICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPLEL----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (265)
Q Consensus 155 ~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~----~~~~~----~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~ 223 (265)
+.+ +++|+++|+++|+++|+||+|+...+. ..... +.++++.|+||++ |.+|+++|+++.+++. .+.
T Consensus 197 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~-~~~ 274 (404)
T 2o1b_A 197 TATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGY-NMSGFRVGFAVGNKDM-IQA 274 (404)
T ss_dssp CCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTT-TCGGGCCEEEEECHHH-HHH
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhc-cCchhheEeEecCHHH-HHH
Confidence 975 789999999999999999999865431 11222 4679999999999 5568999999886654 444
Q ss_pred HHHHHHhccCCCChhHHHHHHhcc
Q 024619 224 LYFLQNAEGSGLAPFDCWICLRGV 247 (265)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~l 247 (265)
+...........++..++.+.+.+
T Consensus 275 l~~~~~~~~~~~~~~~~~a~~~~l 298 (404)
T 2o1b_A 275 LKKYQTHTNAGMFGALQDAAIYAL 298 (404)
T ss_dssp HHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred HHHHHhhccCCCCHHHHHHHHHHH
Confidence 444444444455655555444443
No 64
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.92 E-value=2.4e-24 Score=189.54 Aligned_cols=195 Identities=19% Similarity=0.182 Sum_probs=143.4
Q ss_pred CccCCC-CCh-hHHHHHHHHHhHhCC----CceEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCe
Q 024619 47 YDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (265)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~ 119 (265)
..|+.. |.+ +++++++++.+.+|. +.++++++|++|+. ++..++++||+|++++|+|+++.. .++..|.
T Consensus 72 ~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~----~~~~~g~ 147 (406)
T 1xi9_A 72 NYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTG----LVKFYGG 147 (406)
T ss_dssp CSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH----HHHHTTC
T ss_pred CCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHH----HHHHcCC
Confidence 457665 654 588888888877653 24555555679986 667778999999999999998864 3455788
Q ss_pred EEEeecCC-------CHHHHHhhcCCCceEEEEecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc----C
Q 024619 120 VVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----R 185 (265)
Q Consensus 120 ~~~~~~~~-------d~~~l~~~~~~~~~~i~~~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~----~ 185 (265)
+++.++.+ |++++++++.+++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|+.+.+. .
T Consensus 148 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~ 227 (406)
T 1xi9_A 148 KPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHIS 227 (406)
T ss_dssp EEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCC
T ss_pred EEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCC
Confidence 88887742 789999999888999999999999999875 899999999999999999999875542 1
Q ss_pred CCC--CCc-cEEEeccccccccCCCceeeEEE--eech---hHHHHHHHHHHhccCCCChhHHHHHHhcc
Q 024619 186 PLE--LGA-DIVMHSATKFIAGHSDVMAGVLA--VKGE---RLAKELYFLQNAEGSGLAPFDCWICLRGV 247 (265)
Q Consensus 186 ~~~--~~~-di~~~s~sK~~~g~~g~~~G~v~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 247 (265)
... .+. |++++|+||++ +++|+++|+++ .++. .+.+.+....... ...++..++.+...+
T Consensus 228 ~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l 295 (406)
T 1xi9_A 228 PGSLTKDVPVIVMNGLSKVY-FATGWRLGYMYFVDPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGL 295 (406)
T ss_dssp HHHHCSSSCEEEEEESTTTT-CCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHH
T ss_pred HHHcCCCceEEEEecccccc-CCCccEEEEEEEecCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHH
Confidence 111 356 89999999999 56788999998 6651 3444444444333 444444444433333
No 65
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.92 E-value=8e-24 Score=184.29 Aligned_cols=160 Identities=15% Similarity=0.144 Sum_probs=133.8
Q ss_pred hhHHHHHHHHHhHhCCC--ceE-EecchHHHHH-HHHHhcCCCCEEEEcCCCCCC--hHHHHHhhcCCCCeEEEeecC--
Q 024619 55 PTRDALESLLAKLDKAD--RAL-CFTSGMAALA-AVTHLLGTGEEIVAGDDLYGG--TDRLLSRVTPKTGVVVKRVNT-- 126 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~~i-~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~--~~~~~~~~~~~~g~~~~~~~~-- 126 (265)
+.++++++++++++|.+ +.+ ++++|++|+. ++..++++||+|++++|+|++ +. ..++..|.+++.++.
T Consensus 53 ~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~----~~~~~~g~~~~~v~~~~ 128 (386)
T 2dr1_A 53 KVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKRYK----EVVESNGRKAVVLEYEP 128 (386)
T ss_dssp HHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHHHHHHH----HHHHHTTCEEEEEECCT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCchhHHHH----HHHHHhCCceEEEecCC
Confidence 56999999999999986 545 4556669986 667778999999999999987 43 455667889998886
Q ss_pred ---CCHHHHHhhc--CCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc-CCCCCCccEEEecccc
Q 024619 127 ---CDLDEVASAI--GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATK 200 (265)
Q Consensus 127 ---~d~~~l~~~~--~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~s~sK 200 (265)
.|++++++++ .+++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+... .....+.|++++|+||
T Consensus 129 ~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK 208 (386)
T 2dr1_A 129 GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQK 208 (386)
T ss_dssp TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTS
T ss_pred CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEeccc
Confidence 4899999998 568999999999999999999999999999999999999999987663 3334578999999999
Q ss_pred ccccCCCceeeEEEeechhH
Q 024619 201 FIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 201 ~~~g~~g~~~G~v~~~~~~~ 220 (265)
+++++.| +|+++++++.+
T Consensus 209 ~~~~~~g--~G~~~~~~~~~ 226 (386)
T 2dr1_A 209 AFGVPPG--LAIGAFSERFL 226 (386)
T ss_dssp TTCCCSS--CEEEEECHHHH
T ss_pred cccCCCc--eEEEEECHHHH
Confidence 9977766 59998887544
No 66
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.92 E-value=1.1e-24 Score=194.41 Aligned_cols=194 Identities=15% Similarity=0.131 Sum_probs=143.7
Q ss_pred CccCCC-CCh-hHHHHHHHHHhHhCC--Cc-eEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeE
Q 024619 47 YDYTRS-GNP-TRDALESLLAKLDKA--DR-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (265)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~--~~-~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~ 120 (265)
+.|++. |.+ +++++++++.+.+|. .+ ++++++|++++. ++..++++||+|+++.|+|+++.. .++..|.+
T Consensus 112 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~----~~~~~g~~ 187 (448)
T 3aow_A 112 LQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQ----AFNFYEPQ 187 (448)
T ss_dssp HSCCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH----HHHTTCCE
T ss_pred hCCCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHH----HHHHcCCE
Confidence 567776 665 588888888777786 24 445555568986 677788999999999999998874 44567889
Q ss_pred EEeecCC----CHHHHHhhcC----C--CceEE-EEecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc--
Q 024619 121 VKRVNTC----DLDEVASAIG----P--WTKLV-WVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-- 184 (265)
Q Consensus 121 ~~~~~~~----d~~~l~~~~~----~--~~~~i-~~~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~-- 184 (265)
++.++.+ |++++++++. + ++++| ++++++||||.+.+ +++|+++|+++|++||+||+|+...+.
T Consensus 188 ~~~v~~~~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~ 267 (448)
T 3aow_A 188 YIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGN 267 (448)
T ss_dssp EEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSC
T ss_pred EEEeccCCCCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCC
Confidence 8888763 7899998886 5 78887 46899999999976 579999999999999999999865432
Q ss_pred ---CCC---CCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHHHhcc
Q 024619 185 ---RPL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV 247 (265)
Q Consensus 185 ---~~~---~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 247 (265)
... ..+.++++.|+||++ + +|+|+|+++++++.+ +.+...........++..+..+.+.|
T Consensus 268 ~~~~~~~~~~~~~vi~~~S~SK~~-~-~GlriG~v~~~~~l~-~~l~~~~~~~~~~~~~~~q~a~~~~L 333 (448)
T 3aow_A 268 PEKKIKALDNEGRVIYLGTFSKIL-A-PGFRIGWMVGDPGII-RKMEIAKQSTDLCTNVFGQVVAWRYV 333 (448)
T ss_dssp CCCCTGGGCTTSCEEEEEESTTTT-C-GGGCCEEEEECHHHH-HHHHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred CCcCHHhcCCCCCEEEEccchhhc-c-ccccEEEEEeCHHHH-HHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 111 225689999999999 5 689999999886544 44444443333444555544444333
No 67
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.92 E-value=6e-24 Score=188.34 Aligned_cols=208 Identities=19% Similarity=0.219 Sum_probs=157.1
Q ss_pred hhHHHHHHHHHhHhCCCceEE---ecchHHHHH-HHHHhcCCCCEEEEcC-CCCCChHHHHH------hhcCCCCeEEEe
Q 024619 55 PTRDALESLLAKLDKADRALC---FTSGMAALA-AVTHLLGTGEEIVAGD-DLYGGTDRLLS------RVTPKTGVVVKR 123 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~---~~~g~~al~-~~~~~~~~g~~viv~~-~~~~~~~~~~~------~~~~~~g~~~~~ 123 (265)
+.++++++.+++++|.+..++ +++|++|+. ++.+++++||+|++++ +.|+.+...+. ..++..|++++.
T Consensus 65 ~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~ 144 (431)
T 3ht4_A 65 IGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNA 144 (431)
T ss_dssp HHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEE
T ss_pred hhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEE
Confidence 459999999999999986555 789999986 6777899999999998 99998874432 344567999999
Q ss_pred ecCC-----CHHHHHhhcCCCceEEEEec-CCCCccc---cccHHHHHHHHHH--cCCEEEEeCCcCCCCC-cCCCCCCc
Q 024619 124 VNTC-----DLDEVASAIGPWTKLVWVES-PTNPRQQ---ICDIRKIAEMAHA--HGALLLVDNSIMSPVL-SRPLELGA 191 (265)
Q Consensus 124 ~~~~-----d~~~l~~~~~~~~~~i~~~~-~~np~G~---~~~l~~i~~~a~~--~~~~li~D~~~~~~~~-~~~~~~~~ 191 (265)
++.+ |++++++++.+++++|++++ |+||+|. ..++++|+++|++ +|+++++|++|+.+.. ..+...+.
T Consensus 145 v~~~~~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~~~g~ 224 (431)
T 3ht4_A 145 VPLTEGGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGA 224 (431)
T ss_dssp CCBCTTSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGGGTTC
T ss_pred eCCCCCCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCccccCC
Confidence 9974 99999999999999999995 6666554 4679999999999 9999999999998875 45667789
Q ss_pred cEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccC--C--CChhHHHHHHhccCchHhhHHHHhhchhc
Q 024619 192 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS--G--LAPFDCWICLRGVKTMALRVEKQQVCFFD 263 (265)
Q Consensus 192 di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 263 (265)
|++++|++|+++|..+..+|+++++++.+ +.........+. . .+...++.+++.++.+..+.++..+++..
T Consensus 225 Di~~~S~sK~lgg~~~~~GG~v~~~~~li-~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~ 299 (431)
T 3ht4_A 225 DLMAGSLIKNPGGGIVKTGGYIVGKEQYV-EACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIF 299 (431)
T ss_dssp SEEEEETTSGGGTTTCSSCEEEEECHHHH-HHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEcCccccCCCCCCCceEEEEecHHHH-HHHHHHhccCCcccccCccHHHHHHHHhHhhhHHHHHHHHHHHHHH
Confidence 99999999999764444569998876544 434333332221 1 22222455667777666666666665543
No 68
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.92 E-value=3.1e-24 Score=190.24 Aligned_cols=235 Identities=14% Similarity=0.146 Sum_probs=153.6
Q ss_pred eeEeeccCCCCCCCCCCCCeeeccccccCCC-CCCCCCccCCC-CCh-hHHHHHHHHHhHhCCC-ceEEecchH-HHHHH
Q 024619 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSA-TENGPYDYTRS-GNP-TRDALESLLAKLDKAD-RALCFTSGM-AALAA 85 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~-~~i~~~~g~-~al~~ 85 (265)
..+|+|+ ++++.-+.++.+.++........ ...+.+.|++. |.+ +++++++++.+.++.+ +.+++++|+ +++.+
T Consensus 56 ~~~i~l~-~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~ 134 (432)
T 3ei9_A 56 AQVISLG-IGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISR 134 (432)
T ss_dssp CCCEECS-SCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHH
T ss_pred CCeEEcc-CCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHH
Confidence 3689999 88887544444544433211111 11234567665 654 4777777776555554 455566554 88877
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCC---------eEEEeecCCCHHHHHhhc--CCCceEEEEecCCCCccc
Q 024619 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG---------VVVKRVNTCDLDEVASAI--GPWTKLVWVESPTNPRQQ 154 (265)
Q Consensus 86 ~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g---------~~~~~~~~~d~~~l~~~~--~~~~~~i~~~~~~np~G~ 154 (265)
+..++++||.|++++|+|+++...+.. ....+ .+++.++.++.+.+...+ .+++++|++++|+||||.
T Consensus 135 l~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~NPtG~ 213 (432)
T 3ei9_A 135 LQVMFGSNVTIAVQDPSYPAYVDSSVI-MGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGA 213 (432)
T ss_dssp HHHHHCTTCCEEEEESCCTHHHHHHHH-HTCSCCEETTTTEETTCEEEECCGGGTTSCCGGGCCCCSEEEEESSCTTTCC
T ss_pred HHHHcCCCCEEEEeCCCCHHHHHHHHH-cCCcccccccccccCceEEeccCcccCCcCChhhCCCCCEEEEeCCCCCCCC
Confidence 788899999999999999999866532 23322 245555544222221111 357899999999999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc----CC----CCCCccEEEeccccccccCCCceeeEEEeechhH---
Q 024619 155 ICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RP----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERL--- 220 (265)
Q Consensus 155 ~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~----~~----~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~--- 220 (265)
+.+ +++|+++|++||+++|+||+|+..... .. ...+.++++.|+||++ |.+|+|+|+++++++.+
T Consensus 214 ~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~r~G~~~~~~~~~~~~ 292 (432)
T 3ei9_A 214 AATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYA-GFTGVRLGWTVIPKKLLYSD 292 (432)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHH-CTTTTCCEEEECCTTCBCTT
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhcc-CCcccceEEEEEChHHhhcc
Confidence 975 678888899999999999999854332 11 1124679999999999 67789999999888662
Q ss_pred ----HHHHHHHHHhccCCCChhHHHHHHhccC
Q 024619 221 ----AKELYFLQNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 221 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (265)
...+...........++.....+...++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 324 (432)
T 3ei9_A 293 GFPVAKDFNRIICTCFNGASNISQAGALACLT 324 (432)
T ss_dssp SCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSS
T ss_pred hHHHHHHHHHHhccccCCCCHHHHHHHHHHHh
Confidence 3444444444444455555554444443
No 69
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.92 E-value=9.7e-25 Score=192.16 Aligned_cols=163 Identities=26% Similarity=0.255 Sum_probs=135.7
Q ss_pred hhHHHHHHHHHhHhCC---CceEEecchHHHHH-HHHHh----cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC
Q 024619 55 PTRDALESLLAKLDKA---DRALCFTSGMAALA-AVTHL----LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~---~~~i~~~~g~~al~-~~~~~----~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 126 (265)
+..+++++.+++++|. +.++++++|++|+. ++..+ +++||+|++++|+|++....+...++..|.+++.++.
T Consensus 72 ~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 151 (420)
T 1t3i_A 72 DAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQL 151 (420)
T ss_dssp HHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECB
T ss_pred HHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEecc
Confidence 4578899999999998 45667777779986 66777 7899999999999999654444555667889998886
Q ss_pred -----CCHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc-CCCCCCccEEEecccc
Q 024619 127 -----CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATK 200 (265)
Q Consensus 127 -----~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~s~sK 200 (265)
.|++++++++.+++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+... .....+.|++++|+||
T Consensus 152 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK 231 (420)
T 1t3i_A 152 DEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHK 231 (420)
T ss_dssp CTTSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGG
T ss_pred CCCCCcCHHHHHHhhCCCceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCCCEEEEehhh
Confidence 4899999999989999999999999999999999999999999999999999987654 3334478999999999
Q ss_pred ccccCCCceeeEEEeechhH
Q 024619 201 FIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 201 ~~~g~~g~~~G~v~~~~~~~ 220 (265)
.+ |++| +|+++.+++.+
T Consensus 232 ~~-~~~g--~G~~~~~~~~~ 248 (420)
T 1t3i_A 232 MC-APTG--IGFLYGKEEIL 248 (420)
T ss_dssp TT-SCTT--CEEEEECHHHH
T ss_pred hc-CCCc--eEEEEEchHHH
Confidence 76 6666 68998876443
No 70
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.91 E-value=7.3e-24 Score=183.72 Aligned_cols=220 Identities=15% Similarity=0.137 Sum_probs=149.7
Q ss_pred eeEeeccCCCCC-CCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCC-ceE-EecchHHHHHHHH
Q 024619 11 TLLMNFSNEFDP-YGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RAL-CFTSGMAALAAVT 87 (265)
Q Consensus 11 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~-~~i-~~~~g~~al~~~~ 87 (265)
..+++|+ ++.. ++ ++|.+........ . ....|+.. ...++++.+++++|.+ +.+ ++++|++++.++.
T Consensus 24 ~~~idl~-~~~~~~~--~~~~v~~a~~~~~--~--~~~~y~~~---~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~ 93 (364)
T 1lc5_A 24 DQLLDFS-ANINPLG--MPVSVKRALIDNL--D--CIERYPDA---DYFHLHQALARHHQVPASWILAGNGETESIFTVA 93 (364)
T ss_dssp GGSEECS-SCCCTTC--CCHHHHHHHHHTG--G--GGGSCCCT---TCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHH
T ss_pred cceEEec-cccCCCC--CCHHHHHHHHHHH--H--HhhcCCCC---CHHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHH
Confidence 4589998 4442 33 3344333221111 1 12445433 3567778888888875 444 4455568987444
Q ss_pred HhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCC------HHHHHhhcCCCceEEEEecCCCCcccccc---H
Q 024619 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCD------LDEVASAIGPWTKLVWVESPTNPRQQICD---I 158 (265)
Q Consensus 88 ~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d------~~~l~~~~~~~~~~i~~~~~~np~G~~~~---l 158 (265)
..+ +||+|+++.|+|+++... ++..|.+++.++.+. ++++.+.+.+++++|++++|+||||.+.+ +
T Consensus 94 ~~~-~gd~vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l 168 (364)
T 1lc5_A 94 SGL-KPRRAMIVTPGFAEYGRA----LAQSGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLL 168 (364)
T ss_dssp HHH-CCSEEEEEESCCTHHHHH----HHHTTCEEEEEECCGGGTTCCCTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHH
T ss_pred HHc-CCCeEEEeCCCcHHHHHH----HHHcCCeEEEEeCCcccccchhHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHH
Confidence 444 789999999999998744 455688988888652 35566666678899999999999999987 8
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCc--CC----CCCCccEEEeccccccccCCCceeeEEE-eechhHHHHHHHHHHhc
Q 024619 159 RKIAEMAHAHGALLLVDNSIMSPVLS--RP----LELGADIVMHSATKFIAGHSDVMAGVLA-VKGERLAKELYFLQNAE 231 (265)
Q Consensus 159 ~~i~~~a~~~~~~li~D~~~~~~~~~--~~----~~~~~di~~~s~sK~~~g~~g~~~G~v~-~~~~~~~~~~~~~~~~~ 231 (265)
++|+++|+++|+++|+||+|+.+.+. .. ...+.++++.|+||++ |.+|+++|+++ .+++ +.+.+.... .
T Consensus 169 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~-~~~~l~~~~--~ 244 (364)
T 1lc5_A 169 QAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFY-AIPGLRLGYLVNSDDA-AMARMRRQQ--M 244 (364)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTT-TCTTTCCEEEECCCHH-HHHHHHHHS--C
T ss_pred HHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhh-cCCccceEEEEECCHH-HHHHHHHhC--C
Confidence 99999999999999999999855431 11 2346789999999999 66789999998 6554 434333322 2
Q ss_pred cCCCChhHHHHHHhccCc
Q 024619 232 GSGLAPFDCWICLRGVKT 249 (265)
Q Consensus 232 ~~~~~~~~~~~~~~~l~~ 249 (265)
....++..++.+.+.++.
T Consensus 245 ~~~~~~~~~~~~~~~l~~ 262 (364)
T 1lc5_A 245 PWSVNALAALAGEVALQD 262 (364)
T ss_dssp TTCSCHHHHHHHHHGGGC
T ss_pred CCCCCHHHHHHHHHHHhC
Confidence 345566666666666654
No 71
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.91 E-value=4e-23 Score=178.75 Aligned_cols=213 Identities=17% Similarity=0.174 Sum_probs=150.1
Q ss_pred eEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCC-ceEEecch-HHHHH-HHHH
Q 024619 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSG-MAALA-AVTH 88 (265)
Q Consensus 12 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~-~~i~~~~g-~~al~-~~~~ 88 (265)
.+|+|+...+.+|+ +|.+ + . .....|+..+ ..++++.+++++|.+ +.+++++| ++++. ++..
T Consensus 30 ~~i~l~~~~~~~~~--~~~v-a----~-----~~~~~Y~~~~---~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~ 94 (356)
T 1fg7_A 30 GDVWLNANEYPTAV--EFQL-T----Q-----QTLNRYPECQ---PKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRA 94 (356)
T ss_dssp CSEECSSCCCSSCC--CCCC-C----C-----CCTTSCCCSS---CHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHH
T ss_pred ceEEeeCCCCCCCC--CHhH-h----h-----hhhccCCCcc---HHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHH
Confidence 57899844444554 2333 1 1 1234565543 467778888888876 45666665 58886 6777
Q ss_pred hcCCC-CEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC-----CCHHHHHhhcCCCceEEEEecCCCCccccccH---H
Q 024619 89 LLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----CDLDEVASAIGPWTKLVWVESPTNPRQQICDI---R 159 (265)
Q Consensus 89 ~~~~g-~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l---~ 159 (265)
++++| |+|+++.|+|+.+... ++..|.+++.++. .|++++++++. ++++|++++|+||||.+.+. +
T Consensus 95 ~~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~ 169 (356)
T 1fg7_A 95 FCEPGKDAILYCPPTYGMYSVS----AETIGVECRTVPTLDNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFR 169 (356)
T ss_dssp HCCTTTCEEEECSSSCTHHHHH----HHHHTCEEEECCCCTTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHH
T ss_pred HhCCCCCEEEEeCCChHHHHHH----HHHcCCEEEEeeCCCCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHH
Confidence 88999 9999999999998744 3557889888885 37899999888 89999999999999999875 5
Q ss_pred HHHHHHHHcCCEEEEeCCcCCCCC-cCC----CCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCC
Q 024619 160 KIAEMAHAHGALLLVDNSIMSPVL-SRP----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 234 (265)
Q Consensus 160 ~i~~~a~~~~~~li~D~~~~~~~~-~~~----~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~ 234 (265)
+|+++|+ +|+++|+||+|+.... ... ...+.++++.|+||++ |++|+|.|+++++++. .+.+.... ....
T Consensus 170 ~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~-~~~l~~~~--~~~~ 244 (356)
T 1fg7_A 170 TLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAF-ALAGLRCGFTLANEEV-INLLMKVI--APYP 244 (356)
T ss_dssp HHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTT-CCGGGCCEEEEECHHH-HHHHHHHS--CSSC
T ss_pred HHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhh-cCchhhhEEEEeCHHH-HHHHHHhc--CCCC
Confidence 5566666 8999999999985431 111 2235789999999999 6678999999986644 34333222 2234
Q ss_pred CChhHHHHHHhccCc
Q 024619 235 LAPFDCWICLRGVKT 249 (265)
Q Consensus 235 ~~~~~~~~~~~~l~~ 249 (265)
.++..+..+.+.++.
T Consensus 245 ~~~~~~~a~~~~l~~ 259 (356)
T 1fg7_A 245 LSTPVADIAAQALSP 259 (356)
T ss_dssp SCHHHHHHHHHHTSH
T ss_pred CCHHHHHHHHHHhcC
Confidence 556555555555554
No 72
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.91 E-value=2.6e-24 Score=189.92 Aligned_cols=162 Identities=22% Similarity=0.228 Sum_probs=135.4
Q ss_pred hhHHHHHHHHHhHhCCC--ceEEecchHHHHH-HHHHhc----CCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC
Q 024619 55 PTRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~~i~~~~g~~al~-~~~~~~----~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 127 (265)
+..+++++++++++|.+ .++++++|++|+. ++..+. ++||+|+++.++|+++...+... +..|.+++.++.+
T Consensus 68 ~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~ 146 (423)
T 3lvm_A 68 EAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYLAPQ 146 (423)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHH-HHTTCEEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCCCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHH-HHcCCEEEEeccC
Confidence 35789999999999987 5677777789986 555555 37999999999999987665333 5678999999875
Q ss_pred -----CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc-CCCCCCccEEEeccccc
Q 024619 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (265)
Q Consensus 128 -----d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~s~sK~ 201 (265)
|++++++++.+++++|++++++||||.+.|+++|.++|+++|+++|+||+|+.+... .....+.|++++|+||+
T Consensus 147 ~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~ 226 (423)
T 3lvm_A 147 RNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKI 226 (423)
T ss_dssp TTSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEEEESTTT
T ss_pred CCCccCHHHHHHhcCCCcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEEechHHh
Confidence 899999999999999999999999999999999999999999999999999987763 34455789999999997
Q ss_pred cccCCCceeeEEEeechhH
Q 024619 202 IAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 202 ~~g~~g~~~G~v~~~~~~~ 220 (265)
+ |+.| +|+++++++..
T Consensus 227 ~-g~~g--~G~~~~~~~~~ 242 (423)
T 3lvm_A 227 Y-GPKG--IGALYVRRKPR 242 (423)
T ss_dssp T-SCSS--CEEEEECBTTB
T ss_pred c-CCCC--eEEEEEecccc
Confidence 6 6666 58888876543
No 73
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.91 E-value=2e-24 Score=191.46 Aligned_cols=201 Identities=13% Similarity=0.082 Sum_probs=145.8
Q ss_pred eeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCC-CccCCC-CCh-hHHHHHHHHHhHhCC----CceEEecchHHHH
Q 024619 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGP-YDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAAL 83 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~g~~al 83 (265)
..+|+|+ ++++. ..++|.+........ .... ..|++. |.+ +++++++++.+.+|. ++++++++|++++
T Consensus 44 ~~~i~l~-~~~~~-~~~~~~v~~a~~~~~---~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al 118 (437)
T 3g0t_A 44 TKFCRME-MGVPG-LPAPQIGIETEIQKL---REGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGC 118 (437)
T ss_dssp CCCEECC-CCSCC-SCCCHHHHHHHHHHH---HHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHH
T ss_pred CCEEecc-CcCCC-CCCCHHHHHHHHHHH---hCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHH
Confidence 4689998 55442 223343333221111 1123 567766 654 588888888777653 2455555556998
Q ss_pred H-HHHHhc--CCCC--EEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC------CHHHHHhhc-CCCceEEEEecCCCC
Q 024619 84 A-AVTHLL--GTGE--EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAI-GPWTKLVWVESPTNP 151 (265)
Q Consensus 84 ~-~~~~~~--~~g~--~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~------d~~~l~~~~-~~~~~~i~~~~~~np 151 (265)
. ++..++ ++|| +|+++.|+|+++... ++..|.+++.++.+ |++++++++ .+++++|++++|+||
T Consensus 119 ~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~----~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~np 194 (437)
T 3g0t_A 119 FVSFLVANRTHKNREYGTLFIDPGFNLNKLQ----CRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNP 194 (437)
T ss_dssp HHHHHHHTTSCTTCSCCEEEEESCCHHHHHH----HHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTT
T ss_pred HHHHHHHhcCCCCCccEEEEeCCCcHhHHHH----HHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCC
Confidence 6 667777 9999 999999999988744 45567788888763 789999999 678999999999999
Q ss_pred cccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc-------------CCC-CCCccEEEeccccccccCCCceeeEEE
Q 024619 152 RQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-------------RPL-ELGADIVMHSATKFIAGHSDVMAGVLA 214 (265)
Q Consensus 152 ~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~-------------~~~-~~~~di~~~s~sK~~~g~~g~~~G~v~ 214 (265)
||.+.+ +++|+++|+++|+++|+||+|+...+. ... ..+.++++.|+||++ +++|+++|+++
T Consensus 195 tG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~ 273 (437)
T 3g0t_A 195 TWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAF-SYAGQRIGVLM 273 (437)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTT-SCGGGCCEEEE
T ss_pred CCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCC-CCccceeEEEE
Confidence 999976 788999999999999999999854332 111 246779999999999 66789999999
Q ss_pred eechhHH
Q 024619 215 VKGERLA 221 (265)
Q Consensus 215 ~~~~~~~ 221 (265)
.+++.+.
T Consensus 274 ~~~~~~~ 280 (437)
T 3g0t_A 274 ISGKLYE 280 (437)
T ss_dssp ECHHHHH
T ss_pred ECHHHhh
Confidence 8865443
No 74
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.91 E-value=8.3e-25 Score=189.71 Aligned_cols=223 Identities=17% Similarity=0.190 Sum_probs=153.4
Q ss_pred eeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCC-C--ceEEecchHHHHH-HH
Q 024619 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA-D--RALCFTSGMAALA-AV 86 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~-~--~~i~~~~g~~al~-~~ 86 (265)
..+|+|+ +++.....++.+..+...... ....+.|+. +...++++.+++++|. + .++++++|++++. ++
T Consensus 30 ~~~i~l~-~~~~~~~~~~~v~~a~~~~~~---~~~~~~y~~---~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~ 102 (367)
T 3euc_A 30 HGLVKLD-AMENPYRLPPALRSELAARLG---EVALNRYPV---PSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLA 102 (367)
T ss_dssp TTCEECC-SSCCCCCCCHHHHHHHHHHHH---HHHTTCSCC---CCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHH
T ss_pred CCeeEcc-CCCCCCCCCHHHHHHHHHHhh---hhhhhcCCC---CcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHH
Confidence 4689998 554322223333333221111 001234433 3467888999999988 3 3445445568886 66
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-----CHHHHHhhcCC-CceEEEEecCCCCccccc---c
Q 024619 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP-WTKLVWVESPTNPRQQIC---D 157 (265)
Q Consensus 87 ~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~~~~-~~~~i~~~~~~np~G~~~---~ 157 (265)
..++++||+|+++.|+|+++. ..++..|.+++.++.+ |++++++++.+ ++++|++++|+||||.+. +
T Consensus 103 ~~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~ 178 (367)
T 3euc_A 103 LAAARPGAKVMAPVPGFVMYA----MSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAAD 178 (367)
T ss_dssp HHTCCTTCEEEEEESCSCCSC----HHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHH
T ss_pred HHHcCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHH
Confidence 778899999999999999986 4456789999998854 89999999987 899999999999999995 5
Q ss_pred HHHHHHHHHHc--CCEEEEeCCcCCCCCc----CCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhc
Q 024619 158 IRKIAEMAHAH--GALLLVDNSIMSPVLS----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 231 (265)
Q Consensus 158 l~~i~~~a~~~--~~~li~D~~~~~~~~~----~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~ 231 (265)
+++|+++|++| |+++|+||+|+..... .....+.++++.|+||+ +.+|+++|+++.+++.+ +.+... ..
T Consensus 179 l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~--~~~G~r~G~~~~~~~~~-~~~~~~--~~ 253 (367)
T 3euc_A 179 MEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL--GLAGIRLGYVAGDPQWL-EQLDKV--RP 253 (367)
T ss_dssp HHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT--TSCSCCEEEEEECHHHH-HHHGGG--CC
T ss_pred HHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhh--cccccCceeeeeCHHHH-HHHHHh--CC
Confidence 78889999999 9999999999853321 22234567999999998 56788999999865433 322221 12
Q ss_pred cCCCChhHHHHHHhccCc
Q 024619 232 GSGLAPFDCWICLRGVKT 249 (265)
Q Consensus 232 ~~~~~~~~~~~~~~~l~~ 249 (265)
....++..+..+...++.
T Consensus 254 ~~~~~~~~~~a~~~~l~~ 271 (367)
T 3euc_A 254 PYNVNVLTEATALFALEH 271 (367)
T ss_dssp SSCCCHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHhcC
Confidence 234555555555554443
No 75
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.91 E-value=1.5e-24 Score=187.82 Aligned_cols=225 Identities=14% Similarity=0.141 Sum_probs=148.8
Q ss_pred eeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCC--ceEEecchHHHHH-HHH
Q 024619 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALA-AVT 87 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~--~~i~~~~g~~al~-~~~ 87 (265)
..+|+|+ ++++.-+ ++|.+..+............+.|+..+ ..++++.+++++|.+ .++++++|++++. ++.
T Consensus 26 ~~~i~l~-~~~~~~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~---~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~ 100 (360)
T 3hdo_A 26 ASWIKLN-TNENPYP-PSPEVVKAILEELGPDGAALRIYPSAS---SQKLREVAGELYGFDPSWIIMANGSDEVLNNLIR 100 (360)
T ss_dssp TTSEECS-SCCCSSC-CCHHHHHHHHHHHTTTCGGGGSCCCSS---CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHH
T ss_pred cceeecc-CCCCCCC-CCHHHHHHHHHHHhcccchhhcCCCCc---hHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHH
Confidence 4589999 5554222 333333322111110000133454333 367888888888854 5666666679986 677
Q ss_pred HhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC-CCceEEEEecCCCCccccccHHHHHHHHH
Q 024619 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAH 166 (265)
Q Consensus 88 ~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~~~np~G~~~~l~~i~~~a~ 166 (265)
.++++||+|+++.|+|+++. ..++..|.+++.++.++...+++... .+++++++++|+||||.+.|++++.++|+
T Consensus 101 ~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~ 176 (360)
T 3hdo_A 101 AFAAEGEEIGYVHPSYSYYG----TLAEVQGARVRTFGLTGDFRIAGFPERYEGKVFFLTTPNAPLGPSFPLEYIDELAR 176 (360)
T ss_dssp HHCCTTCEEEEESSSCTHHH----HHHHHHTCEEEEECBCTTSSBTTCCSSBCSSEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred HHhCCCCEEEEcCCChHHHH----HHHHHCCCEEEEeeCCCCCCHHHHHhhcCCCEEEEeCCCCCCCCCcCHHHHHHHHH
Confidence 78899999999999999987 44456789999998764322222222 24679999999999999999999999999
Q ss_pred HcCCEEEEeCCcCCCCCcCC----CCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHH
Q 024619 167 AHGALLLVDNSIMSPVLSRP----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (265)
Q Consensus 167 ~~~~~li~D~~~~~~~~~~~----~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (265)
++|+++|+||+|+....... ...+.++++.|+||++ +.+|+++|+++.+++ +.+.+.... .....++..++.
T Consensus 177 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~-~~~~~~~~~--~~~~~~~~~~~a 252 (360)
T 3hdo_A 177 RCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSY-SLAGMRIGLAIARPE-VIAALDKIR--DHYNLDRLAQAA 252 (360)
T ss_dssp HBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTT-SCTTSCCEEEECCHH-HHHHHHHHS--CSCCSCHHHHHH
T ss_pred HCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhh-cCCccceeeEeeCHH-HHHHHHHhC--CCCCCCHHHHHH
Confidence 99999999999985211111 1235679999999999 667899999988654 434333322 224455555555
Q ss_pred HHhccC
Q 024619 243 CLRGVK 248 (265)
Q Consensus 243 ~~~~l~ 248 (265)
+...++
T Consensus 253 ~~~~l~ 258 (360)
T 3hdo_A 253 CVAALR 258 (360)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 444444
No 76
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.91 E-value=2.7e-23 Score=180.69 Aligned_cols=164 Identities=16% Similarity=0.131 Sum_probs=137.1
Q ss_pred hhHHHHHHHHHhHhCCCc----eEEecchHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC---
Q 024619 55 PTRDALESLLAKLDKADR----ALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~----~i~~~~g~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--- 127 (265)
...+++++++++++|.+. ++++++|++++.++..++++||+|+++++.|++. .+...++..|.+++.++.+
T Consensus 35 ~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~gd~vi~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~ 112 (384)
T 3zrp_A 35 EALAYSLKGLRYVMGASKNYQPLIIPGGGTSAMESVTSLLKPNDKILVVSNGVFGD--RWEQIFKRYPVNVKVLRPSPGD 112 (384)
T ss_dssp HHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHHHGGGGCCTTCEEEEECSSHHHH--HHHHHHTTSSCEEEEECCSTTC
T ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHHHHHhhcCCCCEEEEecCCcchH--HHHHHHHHcCCcEEEecCCCCC
Confidence 458899999999999874 5666667788885567789999999999998653 2335668889999999865
Q ss_pred --CHHHHHhhcCC-CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcC-CCCCCccEEEeccccccc
Q 024619 128 --DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATKFIA 203 (265)
Q Consensus 128 --d~~~l~~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~-~~~~~~di~~~s~sK~~~ 203 (265)
|++++++++.+ ++++|++++++||||.+.|+++|.++|++||+++|+|++|+.+.... ....+.|++++|+||+++
T Consensus 113 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~ 192 (384)
T 3zrp_A 113 YVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKALG 192 (384)
T ss_dssp CCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTSTTC
T ss_pred CCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccCccccccccCCCEEEecCccccc
Confidence 89999999986 89999999999999999999999999999999999999999877643 334578999999999997
Q ss_pred cCCCceeeEEEeechhHHH
Q 024619 204 GHSDVMAGVLAVKGERLAK 222 (265)
Q Consensus 204 g~~g~~~G~v~~~~~~~~~ 222 (265)
++.| +|+++.+++.+..
T Consensus 193 ~~~g--~g~~~~~~~~~~~ 209 (384)
T 3zrp_A 193 SAAG--LGLLLLSPKALSI 209 (384)
T ss_dssp CCSS--EEEEEECHHHHHH
T ss_pred CCCc--eEEEEECHHHHHH
Confidence 7777 6888888765443
No 77
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.91 E-value=8.3e-24 Score=186.36 Aligned_cols=230 Identities=15% Similarity=0.119 Sum_probs=155.6
Q ss_pred eeEeeccCCCCCCCCCCC----CeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCCC---ceEEecchHH
Q 024619 11 TLLMNFSNEFDPYGALST----PLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKAD---RALCFTSGMA 81 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~---~~i~~~~g~~ 81 (265)
..+|+|+ .++|++..++ +.+..+ ... ......+.|.+. |.+ +++++++++....+.+ .++++++|++
T Consensus 37 ~~~i~l~-~g~~~~~~~~~~~~~~v~~a-~~~--~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~ 112 (413)
T 3t18_A 37 EAVINAA-LGTLLDDKGKIIALPSVYDR-LDE--MDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTG 112 (413)
T ss_dssp GGCEECC-SCCCBCTTSCBCCCHHHHHH-HHH--SCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHH
T ss_pred cceEecc-ccCccCCCCCcCChHHHHHH-HHh--cCcccccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHH
Confidence 3689999 7777433222 222221 111 111134567766 776 5999999998887766 5666666679
Q ss_pred HHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC------CHHHHHhhcCC----Cce-EEEEecC-
Q 024619 82 ALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGP----WTK-LVWVESP- 148 (265)
Q Consensus 82 al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~------d~~~l~~~~~~----~~~-~i~~~~~- 148 (265)
|+. ++..++++||+|+++.|+|+.+.. .++..|.+++.++.. |++++++++.+ +++ ++++++|
T Consensus 113 al~~~~~~~~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~ 188 (413)
T 3t18_A 113 AIRSAIFSYLDEGDPLICHDYYWAPYRK----ICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPG 188 (413)
T ss_dssp HHHHHHHHHCCSSCEEEEESSCCTHHHH----HHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSS
T ss_pred HHHHHHHHhcCCCCEEEECCCCcccHHH----HHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCC
Confidence 986 677889999999999999999874 445678899988852 78999988864 677 7888999
Q ss_pred CCCccccccH---HHHHHHHH------HcCCEEEEeCCcCCCCCc-C---C-----CCCCc---cEEEeccccccccCCC
Q 024619 149 TNPRQQICDI---RKIAEMAH------AHGALLLVDNSIMSPVLS-R---P-----LELGA---DIVMHSATKFIAGHSD 207 (265)
Q Consensus 149 ~np~G~~~~l---~~i~~~a~------~~~~~li~D~~~~~~~~~-~---~-----~~~~~---di~~~s~sK~~~g~~g 207 (265)
+||||.+.+. ++|+++|+ ++|+++|+||+|...... . . ...+. +++++|+||.+ +.+|
T Consensus 189 ~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G 267 (413)
T 3t18_A 189 NNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSH-TAYG 267 (413)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHT-TCGG
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccC-CCcC
Confidence 9999999875 55666666 899999999998633221 0 0 11112 38889999999 6678
Q ss_pred ceeeEEEee--chhHHHHHHHHHHhc----cCCCChhHHHHHHhccCc
Q 024619 208 VMAGVLAVK--GERLAKELYFLQNAE----GSGLAPFDCWICLRGVKT 249 (265)
Q Consensus 208 ~~~G~v~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~ 249 (265)
+|+|++++. +..+.+.+...+... ....+...+..+...++.
T Consensus 268 ~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 315 (413)
T 3t18_A 268 LRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERA 315 (413)
T ss_dssp GCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSH
T ss_pred cCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcC
Confidence 999999882 334444444333221 134555555555555543
No 78
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.91 E-value=2.4e-23 Score=182.62 Aligned_cols=202 Identities=19% Similarity=0.154 Sum_probs=147.2
Q ss_pred ceeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CC-hhHHHHHHHHHhHhCCCceEEecchHHHHHHH-
Q 024619 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GN-PTRDALESLLAKLDKADRALCFTSGMAALAAV- 86 (265)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~-~~~~~l~~~l~~~~g~~~~i~~~~g~~al~~~- 86 (265)
+..+++|. +|+++|..++|.+..+..............|... +. +..+++++.+++++|.++.+++++|++++.++
T Consensus 45 g~~~i~~~-~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~sG~~a~~~~~ 123 (401)
T 2bwn_A 45 KQDITVWC-GNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATL 123 (401)
T ss_dssp EEEEEECS-CSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHH
T ss_pred CCcEEEee-CCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEECCcHHHHHHHH
Confidence 35678998 7888776555544433211111001111112111 33 46889999999999988889999998766533
Q ss_pred HHh--cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC----CCceEEEEecCCCCccccccHHH
Q 024619 87 THL--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIRK 160 (265)
Q Consensus 87 ~~~--~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~----~~~~~i~~~~~~np~G~~~~l~~ 160 (265)
..+ ..+||.|+++.|.|+++...+ +..|.+++.++.+|++++++.+. +++++|++++++||||.+.|+++
T Consensus 124 ~~l~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~ 199 (401)
T 2bwn_A 124 STLRVLFPGLIIYSDSLNHASMIEGI----KRNAGPKRIFRHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKE 199 (401)
T ss_dssp HHHHHHSTTCEEEEETTCCHHHHHHH----HHSCCCEEEECTTCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHH
T ss_pred HHHhcCCCCCEEEECchhhHHHHHHH----HHcCCeEEEEcCCCHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHH
Confidence 333 358999999999999887544 45788999999888888888775 57899999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCCcCCCCCcCC-------CC--CCccEEEeccccccccCCCceeeEEEeechhH
Q 024619 161 IAEMAHAHGALLLVDNSIMSPVLSRP-------LE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 161 i~~~a~~~~~~li~D~~~~~~~~~~~-------~~--~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
|.++|+++|+++|+||+|+.+.+... .. .+.|++++|+||+++. + +|+++.+++..
T Consensus 200 i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~-~---GG~~~~~~~~~ 264 (401)
T 2bwn_A 200 ICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGV-F---GGYIAASARMV 264 (401)
T ss_dssp HHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCS-C---CEEEEECHHHH
T ss_pred HHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccC-C---CCEEecCHHHH
Confidence 99999999999999999996654311 01 1358999999999954 3 38887765433
No 79
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.91 E-value=1.9e-23 Score=184.61 Aligned_cols=196 Identities=17% Similarity=0.118 Sum_probs=142.7
Q ss_pred eEeeccCCC---CCCCCCCC-CeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhC----CC--ceEEecch
Q 024619 12 LLMNFSNEF---DPYGALST-PLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDK----AD--RALCFTSG 79 (265)
Q Consensus 12 ~~~~~~~~~---~~~g~~~~-~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g----~~--~~i~~~~g 79 (265)
.+|+|+ .. |..+..++ |.+..+.... ......+.|++. |.+ +++++++++....+ .+ +++++++|
T Consensus 50 ~~i~l~-~G~y~d~~~~~~~~~~v~~a~~~~--~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~ 126 (420)
T 4f4e_A 50 TKVNLG-VGVYTNEDGKIPLLRAVRDAEKAR--VEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGG 126 (420)
T ss_dssp SCEECC-CCSCCCTTSCCCCCHHHHHHHHHH--HHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHH
T ss_pred CcEEee-eeeeECCCCCccCcHHHHHHHHHH--hccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCcc
Confidence 579998 54 44444442 2222221111 111234678776 775 58888888877655 33 34455555
Q ss_pred HHHHH-H--HHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC----C---CHHHHHhhcC---CCceEEEEe
Q 024619 80 MAALA-A--VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----C---DLDEVASAIG---PWTKLVWVE 146 (265)
Q Consensus 80 ~~al~-~--~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~---d~~~l~~~~~---~~~~~i~~~ 146 (265)
++|+. + +..++++||+|++++|+|+++. ..++..|.+++.++. . |++++++.+. +++++++++
T Consensus 127 t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~ 202 (420)
T 4f4e_A 127 TGALKIGADFLRTLNPKAKVAISDPSWENHR----ALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHA 202 (420)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEESCCHHHH----HHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCCcHhHH----HHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeC
Confidence 69986 4 3466899999999999999987 444567888888876 2 7899999887 678999999
Q ss_pred cCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCcC----------CCCCCccEEEeccccccccCCCceeeEE
Q 024619 147 SPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----------PLELGADIVMHSATKFIAGHSDVMAGVL 213 (265)
Q Consensus 147 ~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~~----------~~~~~~di~~~s~sK~~~g~~g~~~G~v 213 (265)
+|+||||.+.+ +++|+++|+++|+++|+||+|+...+.. ....+.++++.|+||.+ +++|+|.|++
T Consensus 203 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~ 281 (420)
T 4f4e_A 203 CCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSF-SLYGERVGAL 281 (420)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTT-TCGGGCEEEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccC-cCcCCCcEEE
Confidence 99999999965 6799999999999999999997554421 11245789999999999 7788999998
Q ss_pred Ee
Q 024619 214 AV 215 (265)
Q Consensus 214 ~~ 215 (265)
+.
T Consensus 282 ~~ 283 (420)
T 4f4e_A 282 SI 283 (420)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 80
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.91 E-value=2.2e-23 Score=181.01 Aligned_cols=190 Identities=20% Similarity=0.207 Sum_probs=149.8
Q ss_pred ChhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHh-cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC----
Q 024619 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (265)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~-~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (265)
.+..+++++.+++++|.+.++++++|++|+. ++..+ +++||+|+++.++|+++... ++..|.+++.++.+
T Consensus 34 ~~~~~~l~~~la~~~~~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~----~~~~G~~~~~~~~~~~~~ 109 (367)
T 3nyt_A 34 GPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAET----VALLGAKPVYVDIDPRTY 109 (367)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHH----HHHTTCEEEEECBCTTTC
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHH----HHHcCCEEEEEecCCccC
Confidence 3678999999999999999999999999986 66777 79999999999999998744 45678999998864
Q ss_pred --CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCCCc--cEEEecc--ccc
Q 024619 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGA--DIVMHSA--TKF 201 (265)
Q Consensus 128 --d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~~--di~~~s~--sK~ 201 (265)
|++++++++.+++++|+ ++||+|...|+++|.++|+++|+++|+|++|+.|........+. |+++.|| +|+
T Consensus 110 ~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~K~ 186 (367)
T 3nyt_A 110 NLDPQLLEAAITPRTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPSAP 186 (367)
T ss_dssp SBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTSSSSEEEEECCTTSS
T ss_pred CcCHHHHHHhcCcCCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCeeccCCCCEEEEECCCCCc
Confidence 89999999998999888 77899999999999999999999999999999876543322233 9999997 899
Q ss_pred cccCCCceeeEEEeechhHHHHHHHHHHh------------ccCCCChhHHHHHHhccCchHh
Q 024619 202 IAGHSDVMAGVLAVKGERLAKELYFLQNA------------EGSGLAPFDCWICLRGVKTMAL 252 (265)
Q Consensus 202 ~~g~~g~~~G~v~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~ 252 (265)
++ +.|. +|+++.+++.+.+........ ....+++..++..+..++.+..
T Consensus 187 l~-~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~ 247 (367)
T 3nyt_A 187 LG-CYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFEE 247 (367)
T ss_dssp SC-CSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTHHH
T ss_pred CC-CcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHHHH
Confidence 94 4344 799988777666655444332 1344666767666666655433
No 81
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.91 E-value=6.4e-24 Score=186.56 Aligned_cols=187 Identities=20% Similarity=0.260 Sum_probs=137.1
Q ss_pred cCCC-CCh-hHHHHHHHHHhHhCC--C-c-eEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEE
Q 024619 49 YTRS-GNP-TRDALESLLAKLDKA--D-R-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVV 121 (265)
Q Consensus 49 y~~~-g~~-~~~~l~~~l~~~~g~--~-~-~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~ 121 (265)
|++. |.+ +++++.+++.+.+|. + + ++++++|++|+. ++..++++||+|+++.|+|+++. ..++..|.++
T Consensus 71 y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~ 146 (407)
T 2zc0_A 71 YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTL----LAFEQLGAKI 146 (407)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHTTTCEE
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHH----HHHHHcCCEE
Confidence 7665 554 477888888776772 2 3 445555569986 66777899999999999999886 4446678898
Q ss_pred EeecCC----CHHHHHhhcC----C--CceEE-EEecCCCCccccccHH---HHHHHHHHcCCEEEEeCCcCCCCCc-C-
Q 024619 122 KRVNTC----DLDEVASAIG----P--WTKLV-WVESPTNPRQQICDIR---KIAEMAHAHGALLLVDNSIMSPVLS-R- 185 (265)
Q Consensus 122 ~~~~~~----d~~~l~~~~~----~--~~~~i-~~~~~~np~G~~~~l~---~i~~~a~~~~~~li~D~~~~~~~~~-~- 185 (265)
+.++.+ |++++++++. + ++++| ++++++||||.+.|.+ +|+++|+++|+++|+||+|+.+.+. .
T Consensus 147 ~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 226 (407)
T 2zc0_A 147 EGVPVDNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGD 226 (407)
T ss_dssp EEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSS
T ss_pred EEcccCCCCCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCC
Confidence 888763 7899998886 5 78887 5789999999998865 9999999999999999999865442 1
Q ss_pred ---CCC---CCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHH
Q 024619 186 ---PLE---LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (265)
Q Consensus 186 ---~~~---~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (265)
... .+.++++.|+||++ + +|+++|++++++ .+.+.+...........++..+..
T Consensus 227 ~~~~~~~~~~~~~i~~~s~sK~~-~-~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 286 (407)
T 2zc0_A 227 IVPLKALDNEGRVIVAGTLSKVL-G-TGFRIGWIIAEG-EILKKVLMQKQPIDFCAPAISQYI 286 (407)
T ss_dssp CCCGGGGCSSCCEEEEEESTTTT-C-TTSCCEEEECCH-HHHHHHHHHHTTTTSSSCHHHHHH
T ss_pred CCChhhcCCCCCEEEEccccccc-C-CCcceEEEecCH-HHHHHHHHHHHhhcCCCCHHHHHH
Confidence 111 24678999999999 4 688999999875 444444444433333345444433
No 82
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.91 E-value=4.1e-24 Score=189.23 Aligned_cols=194 Identities=17% Similarity=0.216 Sum_probs=141.9
Q ss_pred CccCCC-CCh-hHHHHHHHHHhHhC---CC-ceEEecch-HHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCC
Q 024619 47 YDYTRS-GNP-TRDALESLLAKLDK---AD-RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (265)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g---~~-~~i~~~~g-~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g 118 (265)
..|++. |.+ +++++++++.+.+| .+ +.+++++| ++++. ++..++++||+|+++.|+|+++. ..++..|
T Consensus 79 ~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g 154 (425)
T 1vp4_A 79 LQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAI----NAFRQYL 154 (425)
T ss_dssp TSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHTTT
T ss_pred cCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH----HHHHHcC
Confidence 467665 665 58888888877767 33 45555555 58886 67778899999999999999887 4445678
Q ss_pred eEEEeecCC----CHHHHHhhcCC--------CceEE-EEecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCC
Q 024619 119 VVVKRVNTC----DLDEVASAIGP--------WTKLV-WVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPV 182 (265)
Q Consensus 119 ~~~~~~~~~----d~~~l~~~~~~--------~~~~i-~~~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~ 182 (265)
.+++.++.+ |++++++++.+ ++++| ++++|+||||.+.+ +++|+++|+++|+++|+||+|+...
T Consensus 155 ~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~ 234 (425)
T 1vp4_A 155 ANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALR 234 (425)
T ss_dssp CEEEEEEEETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCB
T ss_pred CEEEEeccCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCcccc
Confidence 888888763 78999888765 78888 57999999999975 6789999999999999999998654
Q ss_pred Cc-C---CC----CCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHHHhcc
Q 024619 183 LS-R---PL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV 247 (265)
Q Consensus 183 ~~-~---~~----~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 247 (265)
+. . .. ..+.++++.|+||++ + +|+|+|+++++++. .+.+...........++..++.+.+.|
T Consensus 235 ~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~-~G~r~G~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~a~~~~l 304 (425)
T 1vp4_A 235 YEGETVDPIFKIGGPERVVLLNTFSKVL-A-PGLRIGMVAGSKEF-IRKIVQAKQSADLCSPAITHRLAARYL 304 (425)
T ss_dssp CSSCCCCCHHHHHCTTTEEEEEESTTTT-C-GGGCEEEEECCHHH-HHHHHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred CCCCCCcCHHHhCCCCCEEEEecccccc-c-cccceEEEeeCHHH-HHHHHHHhhhhcCCCCHHHHHHHHHHH
Confidence 31 1 11 225679999999999 5 78999999988644 444444443333344555554443333
No 83
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.91 E-value=2.4e-23 Score=183.71 Aligned_cols=198 Identities=15% Similarity=0.165 Sum_probs=142.1
Q ss_pred CCccCCC-CCh-hHHHHHHHHHhHhCCC---ceEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCe
Q 024619 46 PYDYTRS-GNP-TRDALESLLAKLDKAD---RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (265)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~~---~~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~ 119 (265)
.+.|++. |.+ +++++++++....+.+ .++++++|++|+. ++..++++||+|++++|+|+.+. ..++..|.
T Consensus 73 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~ 148 (418)
T 3rq1_A 73 HVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYR----VICSDTGR 148 (418)
T ss_dssp HHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHH----HHHHHTTC
T ss_pred cCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHH----HHHHHcCC
Confidence 4568777 776 4999999998888777 6666666679986 77788999999999999999987 44566889
Q ss_pred EEEeecCC------CHHHHHhhcCC----Cce-EEEEecC-CCCccccccH---HHHHHHHH------HcCCEEEEeCCc
Q 024619 120 VVKRVNTC------DLDEVASAIGP----WTK-LVWVESP-TNPRQQICDI---RKIAEMAH------AHGALLLVDNSI 178 (265)
Q Consensus 120 ~~~~~~~~------d~~~l~~~~~~----~~~-~i~~~~~-~np~G~~~~l---~~i~~~a~------~~~~~li~D~~~ 178 (265)
+++.++.. |++++++++.+ +++ ++++++| +||||.+.+. ++|+++|+ ++|+++|+||+|
T Consensus 149 ~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y 228 (418)
T 3rq1_A 149 TLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAY 228 (418)
T ss_dssp EEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTT
T ss_pred EEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccc
Confidence 99988852 78999888864 566 8889999 9999999874 56666676 899999999999
Q ss_pred CCCCCc---------CCCCCCc---cEEEeccccccccCCCceeeEEEe--echhHHHHHHHHHHh----ccCCCChhHH
Q 024619 179 MSPVLS---------RPLELGA---DIVMHSATKFIAGHSDVMAGVLAV--KGERLAKELYFLQNA----EGSGLAPFDC 240 (265)
Q Consensus 179 ~~~~~~---------~~~~~~~---di~~~s~sK~~~g~~g~~~G~v~~--~~~~~~~~~~~~~~~----~~~~~~~~~~ 240 (265)
...... ....... .++++|+||.+ |.+|+|+|++++ +++.+.+.+...... .....+...+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (418)
T 3rq1_A 229 LDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGF-TMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAM 307 (418)
T ss_dssp GGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTT-TCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHH
T ss_pred ccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCC-cCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHH
Confidence 633221 0111122 38889999999 677899999988 233444444333322 1234555555
Q ss_pred HHHHhccC
Q 024619 241 WICLRGVK 248 (265)
Q Consensus 241 ~~~~~~l~ 248 (265)
..+...++
T Consensus 308 ~a~~~~l~ 315 (418)
T 3rq1_A 308 RTMANIVA 315 (418)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhC
Confidence 44444443
No 84
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.91 E-value=2.8e-24 Score=186.70 Aligned_cols=169 Identities=16% Similarity=0.216 Sum_probs=131.1
Q ss_pred CccCCC-CChhHHHHHHHHHhHhCC--C-ceEEecch-HHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeE
Q 024619 47 YDYTRS-GNPTRDALESLLAKLDKA--D-RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (265)
Q Consensus 47 ~~y~~~-g~~~~~~l~~~l~~~~g~--~-~~i~~~~g-~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~ 120 (265)
..|+.. +..+++++++++.+.+|. + +.+++++| ++++. ++..++++||+|++++|+|+++.. .++..|.+
T Consensus 64 ~~y~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~~~gd~Vl~~~~~y~~~~~----~~~~~g~~ 139 (369)
T 3cq5_A 64 NRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPI----LAKGTHTE 139 (369)
T ss_dssp TSCCCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCSTTCEEEEEESSCTHHHH----HHHHTTCE
T ss_pred ccCCCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhcCCCCEEEEcCCChHHHHH----HHHHcCCE
Confidence 456554 323467777777666543 2 45566665 58885 677788999999999999998874 44557888
Q ss_pred EEeecCC-----CHHHHHhhcCC-CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc-CCC----CC
Q 024619 121 VKRVNTC-----DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPL----EL 189 (265)
Q Consensus 121 ~~~~~~~-----d~~~l~~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~-~~~----~~ 189 (265)
++.++.+ |++++++++.+ ++++|++++|+||||.+.|++++.++++.+++++|+||+|+.+... ... ..
T Consensus 140 ~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 219 (369)
T 3cq5_A 140 FIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKY 219 (369)
T ss_dssp EEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTC
T ss_pred EEEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhC
Confidence 8888743 78999998876 8999999999999999999999999999999999999999865532 111 23
Q ss_pred C-ccEEEeccccccccCCCceeeEEEeechhH
Q 024619 190 G-ADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 190 ~-~di~~~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
+ .++++.|+||++ +.+|+++|+++++++.+
T Consensus 220 ~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~ 250 (369)
T 3cq5_A 220 PTKLVVSRTMSKAF-DFAGGRLGYFVANPAFI 250 (369)
T ss_dssp TTTEEEEEESSSTT-SCGGGCCEEEEECTHHH
T ss_pred CCCEEEEEechHhc-CCcccceEEEEeCHHHH
Confidence 4 679999999999 55689999999886543
No 85
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.91 E-value=3.9e-23 Score=182.16 Aligned_cols=200 Identities=18% Similarity=0.205 Sum_probs=142.6
Q ss_pred eeEeeccCCCCC---CCCCCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhH------h----CCCceEE
Q 024619 11 TLLMNFSNEFDP---YGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKL------D----KADRALC 75 (265)
Q Consensus 11 ~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~------~----g~~~~i~ 75 (265)
..+++|+ .+++ ....++|.+........ .......|++. |.+ +++++++++.+. . ..+.+++
T Consensus 33 ~~~i~l~-~g~p~~~~~~~~~~~v~~a~~~~~--~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~ 109 (416)
T 1bw0_A 33 KPIIKLS-VGDPTLDKNLLTSAAQIKKLKEAI--DSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVL 109 (416)
T ss_dssp SCCEECC-CCCTTTTSCSCCCHHHHHHHHHHH--HTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEE
T ss_pred CCeEEec-CcCCCcccCCCCCHHHHHHHHHHh--hCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEE
Confidence 4688998 5443 23334444433321111 11123467665 554 477777777632 1 2334555
Q ss_pred ecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC-------CCHHHHHhhcCCCceEEEEec
Q 024619 76 FTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------CDLDEVASAIGPWTKLVWVES 147 (265)
Q Consensus 76 ~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~i~~~~ 147 (265)
+++|++++. ++..++++||+|+++.|+|+++.. .++..|.+++.++. .|++++++++.+++++|++++
T Consensus 110 ~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~ 185 (416)
T 1bw0_A 110 CSGGSHGILMAITAICDAGDYALVPQPGFPHYET----VCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTN 185 (416)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH----HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEES
T ss_pred eCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHH----HHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeC
Confidence 556668986 677788999999999999999874 44567888888764 378999999988899999999
Q ss_pred CCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc---------CCCC---CCccEEEeccccccccCCCceeeE
Q 024619 148 PTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---------RPLE---LGADIVMHSATKFIAGHSDVMAGV 212 (265)
Q Consensus 148 ~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~---------~~~~---~~~di~~~s~sK~~~g~~g~~~G~ 212 (265)
|+||||.+.+ +++|+++|+++|+++|+||+|+...+. .... .+.+++++|+||++ +.+|+|+|+
T Consensus 186 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Glr~G~ 264 (416)
T 1bw0_A 186 PSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNL-VVPGWRLGW 264 (416)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTT-SCGGGCCEE
T ss_pred CCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhC-CCCCceEEE
Confidence 9999999988 899999999999999999999863221 1111 12468899999998 557899999
Q ss_pred EEeech
Q 024619 213 LAVKGE 218 (265)
Q Consensus 213 v~~~~~ 218 (265)
++++++
T Consensus 265 ~~~~~~ 270 (416)
T 1bw0_A 265 LLYVDP 270 (416)
T ss_dssp EEEECT
T ss_pred EEeeCc
Confidence 998875
No 86
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.90 E-value=1e-22 Score=180.43 Aligned_cols=225 Identities=13% Similarity=0.091 Sum_probs=156.5
Q ss_pred eEeeccCCCCC--CCCCCCCee---eccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHh-CCC--c---eEEecc
Q 024619 12 LLMNFSNEFDP--YGALSTPLY---QTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLD-KAD--R---ALCFTS 78 (265)
Q Consensus 12 ~~~~~~~~~~~--~g~~~~~~~---~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~-g~~--~---~i~~~~ 78 (265)
.+++|+ .+++ +|. +|.+ ++.. ..........|++. |.+ +++++++++.+.. +.+ + ++++++
T Consensus 48 ~~i~l~-~g~~~~~~~--~~~~~~~~a~~---~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g 121 (430)
T 2x5f_A 48 TTYNAT-IGMATNKDG--KMFASSLDAMF---NDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNA 121 (430)
T ss_dssp CSEECC-CSSCEETTE--ECCCHHHHTTB---SSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESH
T ss_pred CcEEee-eeeccCCCC--chhhHHHHHHH---HhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCC
Confidence 578998 5555 453 3333 2221 11111134567766 664 4777777765543 443 4 455555
Q ss_pred hHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCC-CCeEEEeecCC------CHHHHHhhcCC---CceEEEEec
Q 024619 79 GMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK-TGVVVKRVNTC------DLDEVASAIGP---WTKLVWVES 147 (265)
Q Consensus 79 g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~------d~~~l~~~~~~---~~~~i~~~~ 147 (265)
|++|+. ++..++++||+|++++|+|+++. ..++. .|.+++.++.+ |++++++++.+ ++++|++++
T Consensus 122 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~ 197 (430)
T 2x5f_A 122 LTHGLSLVGDLFVNQDDTILLPEHNWGNYK----LVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNY 197 (430)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESSCCTHHH----HHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECS
T ss_pred chHHHHHHHHHHhCCCCEEEEcCCcCccHH----HHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcC
Confidence 569986 67778899999999999999986 44566 88999888752 68889888865 789999999
Q ss_pred CCCCcccccc---HHHHHHHHHH-----cCCEEEEeCCcCCCCCc----CC-C----C-CCc---cEEEeccccccccCC
Q 024619 148 PTNPRQQICD---IRKIAEMAHA-----HGALLLVDNSIMSPVLS----RP-L----E-LGA---DIVMHSATKFIAGHS 206 (265)
Q Consensus 148 ~~np~G~~~~---l~~i~~~a~~-----~~~~li~D~~~~~~~~~----~~-~----~-~~~---di~~~s~sK~~~g~~ 206 (265)
|+||||.+.+ +++|+++|++ +|+++|+||+|+...+. .+ . . .+. ++++.|+||++ |++
T Consensus 198 p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~ 276 (430)
T 2x5f_A 198 PNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEF-FAW 276 (430)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHT-TCG
T ss_pred CCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCC-CCC
Confidence 9999999987 8999999999 99999999999864432 11 1 1 345 78999999999 666
Q ss_pred CceeeEEEe---echhHHHHHHHHHHh----ccCCCChhHHHHHHhccC
Q 024619 207 DVMAGVLAV---KGERLAKELYFLQNA----EGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 207 g~~~G~v~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~ 248 (265)
|+|+|++++ +++ +.+.+...... .....++..++.+.+.|+
T Consensus 277 G~riG~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 324 (430)
T 2x5f_A 277 GFRVGFMTFGTSDQT-TKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLK 324 (430)
T ss_dssp GGCCEEEEEBCCCHH-HHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred CCCeEEEEEecCCHH-HHHHHHHHHhhhhhcccCCCChHHHHHHHHHHc
Confidence 899999998 554 44444443333 344566666555555554
No 87
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.90 E-value=1.8e-23 Score=182.35 Aligned_cols=184 Identities=18% Similarity=0.206 Sum_probs=141.2
Q ss_pred hHHHHHHHHHhHhCC---CceEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHH
Q 024619 56 TRDALESLLAKLDKA---DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDE 131 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~---~~~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~ 131 (265)
..+++++.+++++|. ++++++++|++++. ++..+ +||+|+++.|+|+++...+. .++..|++++.+ .|+++
T Consensus 59 ~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~-~~~~~g~~~~~v--~d~~~ 133 (374)
T 2aeu_A 59 FAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL--KPKKVIHYLPELPGHPSIER-SCKIVNAKYFES--DKVGE 133 (374)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHH-HHHHTTCEEEEE--SCHHH
T ss_pred HHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHH-HHHHcCcEEEEe--CCHHH
Confidence 356788888888998 56788888889986 55555 99999999999988654443 556678999888 68999
Q ss_pred HHhhcCCCceE-EEEecCCCCcc-ccccHHHHHHHHHHcCCEEEEeCCcCCCCC---cC--CCCCCccEEEecccccccc
Q 024619 132 VASAIGPWTKL-VWVESPTNPRQ-QICDIRKIAEMAHAHGALLLVDNSIMSPVL---SR--PLELGADIVMHSATKFIAG 204 (265)
Q Consensus 132 l~~~~~~~~~~-i~~~~~~np~G-~~~~l~~i~~~a~~~~~~li~D~~~~~~~~---~~--~~~~~~di~~~s~sK~~~g 204 (265)
++++ .+++++ |++++|+|||| ...++++|.++|+++|+++|+||+|+.+.. .. +...+.|++++|+||+++|
T Consensus 134 l~~~-~~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g 212 (374)
T 2aeu_A 134 ILNK-IDKDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEG 212 (374)
T ss_dssp HHTT-CCTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSS
T ss_pred HHhc-CCCccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccC
Confidence 9998 778999 99999999999 888999999999999999999999876531 11 3345789999999999855
Q ss_pred CCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHHHhccCc
Q 024619 205 HSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT 249 (265)
Q Consensus 205 ~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 249 (265)
.++|+++++++.+ +.+.......+...++..++.+...++.
T Consensus 213 ---~~~G~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~a~~~al~~ 253 (374)
T 2aeu_A 213 ---PRGGLLAGKKELV-DKIYIEGTKFGLEAQPPLLAGIYRALKN 253 (374)
T ss_dssp ---CSCEEEEEEHHHH-HHHHHHHHTTTCBCCHHHHHHHHHHHHH
T ss_pred ---cceEEEEECHHHH-HHHHHhhccccCCCCHHHHHHHHHHHHH
Confidence 3579998877544 4444444444455666666655555543
No 88
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.90 E-value=3.2e-23 Score=187.25 Aligned_cols=179 Identities=17% Similarity=0.189 Sum_probs=136.3
Q ss_pred CCCccCCC-CCh-hHHHHHHHHHhHhCC----CceEEecchHHHHH-HHHHhc-CCCCEEEEcCCCCCChHHHHHhhcCC
Q 024619 45 GPYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLL-GTGEEIVAGDDLYGGTDRLLSRVTPK 116 (265)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~g~~al~-~~~~~~-~~g~~viv~~~~~~~~~~~~~~~~~~ 116 (265)
....|+.. |.+ +++++++++.+.+|. ++++++++|++++. ++..++ ++||.|+++.|+|+.+.. .++.
T Consensus 126 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~----~~~~ 201 (500)
T 3tcm_A 126 ATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSA----SIAL 201 (500)
T ss_dssp CSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHH----HHHH
T ss_pred cCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHH----HHHH
Confidence 45678877 775 599999999888763 35666666679986 666677 799999999999999874 4456
Q ss_pred CCeEEEeecC-------CCHHHHHhhcCC------CceEEEEecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCC
Q 024619 117 TGVVVKRVNT-------CDLDEVASAIGP------WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMS 180 (265)
Q Consensus 117 ~g~~~~~~~~-------~d~~~l~~~~~~------~~~~i~~~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~ 180 (265)
.|.+++.+++ .|++++++++.+ ++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|+.
T Consensus 202 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~ 281 (500)
T 3tcm_A 202 HGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQE 281 (500)
T ss_dssp TTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred cCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccc
Confidence 7888888873 378999998875 7899999999999999965 67888889999999999999987
Q ss_pred CCCcC-----C-----------CCCCccEEEeccccccccCCCceeeEEEee--chhHHHHHHHH
Q 024619 181 PVLSR-----P-----------LELGADIVMHSATKFIAGHSDVMAGVLAVK--GERLAKELYFL 227 (265)
Q Consensus 181 ~~~~~-----~-----------~~~~~di~~~s~sK~~~g~~g~~~G~v~~~--~~~~~~~~~~~ 227 (265)
..+.. . ......+++.|+||.+.|.+|+|+|++++. ++.+.+.+...
T Consensus 282 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~ 346 (500)
T 3tcm_A 282 NIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKI 346 (500)
T ss_dssp CBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHH
T ss_pred cccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHH
Confidence 55421 1 011124888999999867788999999872 33444444333
No 89
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.90 E-value=5.3e-23 Score=178.84 Aligned_cols=165 Identities=20% Similarity=0.220 Sum_probs=136.4
Q ss_pred hhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHh-cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-----
Q 024619 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~-~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (265)
+..+++++.+++++|.++++++++|++|+. ++..+ +++||+|+++.++|+++... ++..|.+++.++.+
T Consensus 36 ~~~~~l~~~la~~~~~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~ 111 (373)
T 3frk_A 36 DEDKKFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALA----VSYTGAKPIFVEPDIRTYN 111 (373)
T ss_dssp HHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHH----HHHHSCEEEEECEETTTTE
T ss_pred chHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHH----HHHcCCEEEEEeccccccC
Confidence 678999999999999999999999999986 67777 89999999999999998744 45568899888865
Q ss_pred -CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCCC--ccEEEeccc--ccc
Q 024619 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSAT--KFI 202 (265)
Q Consensus 128 -d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~--~di~~~s~s--K~~ 202 (265)
|++++++++.+++++|+ ++||+|.+.|+++|.++|+++|+++|+|++|+.|........+ .|+++.||+ |++
T Consensus 112 ~d~~~l~~~l~~~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~l 188 (373)
T 3frk_A 112 IDPSLIESAITEKTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGMKVGSLGDAAGFSFYPAKNL 188 (373)
T ss_dssp ECGGGTGGGCCTTEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSS
T ss_pred cCHHHHHHhcCCCCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCEeccccccEEEEeCcCCCcc
Confidence 89999999998999888 6779999999999999999999999999999987654333333 689999977 999
Q ss_pred ccCCCceeeEEEeechhHHHHHHHHH
Q 024619 203 AGHSDVMAGVLAVKGERLAKELYFLQ 228 (265)
Q Consensus 203 ~g~~g~~~G~v~~~~~~~~~~~~~~~ 228 (265)
++ .|. +|+++.++..+.+......
T Consensus 189 ~~-~g~-gg~~~~~~~~~~~~~~~~~ 212 (373)
T 3frk_A 189 GS-LGD-GGAVVTNDKDLAEKIKALS 212 (373)
T ss_dssp CC-SSS-CEEEEESCHHHHHHHHHHH
T ss_pred Cc-cce-eEEEEeCCHHHHHHHHHHH
Confidence 54 232 7899888776655555444
No 90
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.90 E-value=4.7e-22 Score=175.99 Aligned_cols=197 Identities=15% Similarity=0.183 Sum_probs=142.9
Q ss_pred CccCCC-CCh-hHHHHHHHHHhHhC----C--CceEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCC
Q 024619 47 YDYTRS-GNP-TRDALESLLAKLDK----A--DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (265)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g----~--~~~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~ 117 (265)
..|++. |.+ +++++++++.+.+| . +.+++++++++++. ++..++++||+|++++|+|+++.. ......
T Consensus 77 ~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~---~~~~~~ 153 (428)
T 1iay_A 77 ANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNR---DLRWRT 153 (428)
T ss_dssp HHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHH---HTTTTT
T ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHH---HHHHhc
Confidence 457665 554 47778888777655 2 34445545558886 677788999999999999999862 234567
Q ss_pred CeEEEeecCC-------CHHHHHhhcC------CCceEEEEecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCC
Q 024619 118 GVVVKRVNTC-------DLDEVASAIG------PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSP 181 (265)
Q Consensus 118 g~~~~~~~~~-------d~~~l~~~~~------~~~~~i~~~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~ 181 (265)
|.+++.++.+ |++++++++. +++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|+..
T Consensus 154 g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 233 (428)
T 1iay_A 154 GVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAAT 233 (428)
T ss_dssp CCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGG
T ss_pred CCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEecccccc
Confidence 8999988753 7888988875 36899999999999999988 899999999999999999999864
Q ss_pred CCc-----CCC--CCC-------cc--EEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHHHh
Q 024619 182 VLS-----RPL--ELG-------AD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 245 (265)
Q Consensus 182 ~~~-----~~~--~~~-------~d--i~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (265)
.+. ... ..+ .| +++.|+||++ |.+|+|.|+++++++.+.+.+..... ....++..+..+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~-g~~Glr~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~ 310 (428)
T 1iay_A 234 VFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDM-GLPGFRVGIIYSFNDDVVNCARKMSS--FGLVSTQTQYFLAA 310 (428)
T ss_dssp CCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTS-SCGGGCEEEEEESCHHHHHHHHHHHT--TSCCCHHHHHHHHH
T ss_pred ccCCCCccCHHHhccccccccCCCCcEEEEecchhhc-CCCCceEEEEEeCCHHHHHHHHHHHh--cccCCHHHHHHHHH
Confidence 321 111 111 45 8999999999 66789999999865555554443322 23455555555555
Q ss_pred ccCc
Q 024619 246 GVKT 249 (265)
Q Consensus 246 ~l~~ 249 (265)
.++.
T Consensus 311 ~l~~ 314 (428)
T 1iay_A 311 MLSD 314 (428)
T ss_dssp HTTC
T ss_pred HhcC
Confidence 5554
No 91
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.90 E-value=1e-22 Score=176.86 Aligned_cols=165 Identities=21% Similarity=0.260 Sum_probs=136.8
Q ss_pred ChhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHh-cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC----
Q 024619 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (265)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~-~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (265)
.+...++++.+++++|.++.+++++|++|+. ++..+ +++||+|+++.|+|+++.. .++..|.+++.++.+
T Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~ 112 (374)
T 3uwc_A 37 GAELEKFEKRFAALHNAPHAIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIASVG----AIVQAGATPVLVDSENGYV 112 (374)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHH----HHHHTTCEEEEECBCTTSS
T ss_pred ChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHH----HHHHcCCEEEEEecCCCCC
Confidence 3678999999999999999999999999986 67777 8999999999999998874 446678999999876
Q ss_pred -CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCC--CccEEEeccc--ccc
Q 024619 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLEL--GADIVMHSAT--KFI 202 (265)
Q Consensus 128 -d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~--~~di~~~s~s--K~~ 202 (265)
|++++++++.+++++|+ ++||||.+.|+++|.++|+++|+++|+|++|+.+........ ..|+++.|+| |++
T Consensus 113 ~d~~~l~~~~~~~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~~~d~~~~s~~~~K~l 189 (374)
T 3uwc_A 113 IDPEKIEAAITDKTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDKFVGSWGQFACFSLHPLKNL 189 (374)
T ss_dssp BCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECSSSSSS
T ss_pred cCHHHHHHhCCCCceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeeccccccEEEEeCCCCCcC
Confidence 89999999988888888 889999999999999999999999999999998764322222 2699999977 999
Q ss_pred ccCCCceeeEEEeechhHHHHHHHH
Q 024619 203 AGHSDVMAGVLAVKGERLAKELYFL 227 (265)
Q Consensus 203 ~g~~g~~~G~v~~~~~~~~~~~~~~ 227 (265)
+ +.|. +|+++.++..+.+.....
T Consensus 190 ~-~~g~-~g~~~~~~~~~~~~~~~~ 212 (374)
T 3uwc_A 190 N-VWSD-AGVIITHSDEYAEKLRLY 212 (374)
T ss_dssp C-CSSC-CEEEEESCHHHHHHHHHH
T ss_pred C-ccce-eEEEEeCCHHHHHHHHHH
Confidence 5 4333 788888876665555444
No 92
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.90 E-value=1e-23 Score=187.85 Aligned_cols=231 Identities=14% Similarity=0.146 Sum_probs=148.4
Q ss_pred ceeEeeccCCCCCCCCCCCCeeecc-ccccCCCC-CCCCCccCCC-CCh-hHHHHHHHHHhHh--CCC-ceEEecch-HH
Q 024619 10 STLLMNFSNEFDPYGALSTPLYQTA-TFKQPSAT-ENGPYDYTRS-GNP-TRDALESLLAKLD--KAD-RALCFTSG-MA 81 (265)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~-~~~~~~y~~~-g~~-~~~~l~~~l~~~~--g~~-~~i~~~~g-~~ 81 (265)
+..+|+|+ +++ .+...+|.+..+ ........ ....+.|++. |.+ +++++++++. + +.+ +.+++++| ++
T Consensus 68 ~~~~i~l~-~g~-~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~i~~t~G~~~ 143 (449)
T 3qgu_A 68 DAKIISLG-IGD-TTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAADEIFISDGSKC 143 (449)
T ss_dssp TCCCEECS-SCC-CCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGGEEEESCHHH
T ss_pred CCCEEEee-CCC-CCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHHEEEccCHHH
Confidence 34689999 554 333344433332 21111110 1234567665 554 3555555554 2 333 45555555 58
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeE----------EEeecCCCHHHHHhhcC--CCceEEEEecCC
Q 024619 82 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV----------VKRVNTCDLDEVASAIG--PWTKLVWVESPT 149 (265)
Q Consensus 82 al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~----------~~~~~~~d~~~l~~~~~--~~~~~i~~~~~~ 149 (265)
++.++..++++||+|++++|+|+++...+ +..|.+ ++.++.++.+.+...+. +++++|++++|+
T Consensus 144 al~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p~ 219 (449)
T 3qgu_A 144 DIARIQMMFGSKPTVAVQDPSYPVYVDTS----VMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPN 219 (449)
T ss_dssp HHHHHHHHHCSSSCEEEEESCCTHHHHHH----HHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGCCCCSEEEEESSC
T ss_pred HHHHHHHHhCCCCEEEEcCCCChhHHHHH----HHcCCcccccccccceeEEEecccccCCcCChhHcCCCCEEEEeCCC
Confidence 88755888999999999999999997554 344555 67777654323322222 578999999999
Q ss_pred CCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc-----CCC----CCCccEEEeccccccccCCCceeeEEEeec
Q 024619 150 NPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKG 217 (265)
Q Consensus 150 np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~~----~~~~di~~~s~sK~~~g~~g~~~G~v~~~~ 217 (265)
||||.+.+ +++|+++|+++|+++|+||+|+..... ... ..+.++++.|+||++ |.+|+|+|++++++
T Consensus 220 NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~ 298 (449)
T 3qgu_A 220 NPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYA-GFTGVRLGWTVVPK 298 (449)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGG-TCTTCCCEEEECCT
T ss_pred CCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhc-CCccceeEEEecCH
Confidence 99999975 788999999999999999999864332 111 135679999999999 67789999999887
Q ss_pred hhHHH-------HHHHHHHhccCCCChhHHHHHHhccCc
Q 024619 218 ERLAK-------ELYFLQNAEGSGLAPFDCWICLRGVKT 249 (265)
Q Consensus 218 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~ 249 (265)
+.+.. .............++..+..+...++.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 337 (449)
T 3qgu_A 299 ALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQP 337 (449)
T ss_dssp TCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSH
T ss_pred HHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhh
Confidence 65431 333333444445566655555555543
No 93
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.90 E-value=1.5e-22 Score=182.70 Aligned_cols=180 Identities=18% Similarity=0.208 Sum_probs=133.8
Q ss_pred CCccCCC-CCh-hHHHHHHHHHhHhC-C----CceEEecchHHHHH-HHHHhcCCCC----EEEEcCCCCCChHHHHHhh
Q 024619 46 PYDYTRS-GNP-TRDALESLLAKLDK-A----DRALCFTSGMAALA-AVTHLLGTGE----EIVAGDDLYGGTDRLLSRV 113 (265)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g-~----~~~i~~~~g~~al~-~~~~~~~~g~----~viv~~~~~~~~~~~~~~~ 113 (265)
...|+.. |.+ +++++++++.+..| . +++++++++++++. ++..++++|| .|+++.|.|+.+.. .
T Consensus 122 ~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~----~ 197 (498)
T 3ihj_A 122 LGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSA----V 197 (498)
T ss_dssp ------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHH----H
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHH----H
Confidence 4568777 875 69999999998875 3 34555555568886 6677888875 99999999999874 4
Q ss_pred cCCCCeEEEeecCC-------CHHHHHhhcCC-----CceEEEEecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCc
Q 024619 114 TPKTGVVVKRVNTC-------DLDEVASAIGP-----WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 114 ~~~~g~~~~~~~~~-------d~~~l~~~~~~-----~~~~i~~~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~ 178 (265)
++..|.+++.++++ |++++++++.+ ++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|
T Consensus 198 ~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y 277 (498)
T 3ihj_A 198 ISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVY 277 (498)
T ss_dssp HHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred HHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCc
Confidence 45678888888765 88999998865 5899999999999999965 678999999999999999999
Q ss_pred CCCCCcCC---C---C-----------CCccEEEeccccccccCCCceeeEEEe--echhHHHHHHHHHH
Q 024619 179 MSPVLSRP---L---E-----------LGADIVMHSATKFIAGHSDVMAGVLAV--KGERLAKELYFLQN 229 (265)
Q Consensus 179 ~~~~~~~~---~---~-----------~~~di~~~s~sK~~~g~~g~~~G~v~~--~~~~~~~~~~~~~~ 229 (265)
+...+... . . ....++++|+||.+.|.+|+|+||++. .+..+.+.+.....
T Consensus 278 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~ 347 (498)
T 3ihj_A 278 QDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLS 347 (498)
T ss_dssp TTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHH
T ss_pred cccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHh
Confidence 87655311 0 0 012478999999997778999999984 44455554444443
No 94
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.90 E-value=1.2e-22 Score=177.73 Aligned_cols=198 Identities=15% Similarity=0.100 Sum_probs=142.4
Q ss_pred eeEeeccCCC---CCCCCCCC-CeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhC----CC--ceEEecc
Q 024619 11 TLLMNFSNEF---DPYGALST-PLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDK----AD--RALCFTS 78 (265)
Q Consensus 11 ~~~~~~~~~~---~~~g~~~~-~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g----~~--~~i~~~~ 78 (265)
..+++|+ .. |+.+..+. |.+..+.... .......+.|++. |.+ +++++++++....+ .+ .++++++
T Consensus 26 ~~~i~l~-~g~y~d~~~~~~~~~~v~~a~~~~-~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g 103 (397)
T 3fsl_A 26 SDKVNLS-IGLYYNEDGIIPQLQAVAEAEARL-NAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLG 103 (397)
T ss_dssp SCCEECS-SCCCCCTTSCCCCCHHHHHHHHHH-HHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESH
T ss_pred CCeEEEe-eeEEECCCCCccCcHHHHHHHHhh-ccCccccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCC
Confidence 3589999 55 44444432 2222221110 1112234577775 765 58888888877655 33 3445555
Q ss_pred hHHHHH-H--HHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC----C---CHHHHHhhcC---CCceEEEE
Q 024619 79 GMAALA-A--VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----C---DLDEVASAIG---PWTKLVWV 145 (265)
Q Consensus 79 g~~al~-~--~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~---d~~~l~~~~~---~~~~~i~~ 145 (265)
|++++. + +..++++||+|+++.|+|+++. ..++..|.+++.++. . |++++++++. ++++++++
T Consensus 104 ~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~ 179 (397)
T 3fsl_A 104 GSGALKVGADFLKRYFPESGVWVSDPTWENHV----AIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLH 179 (397)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEESSCCHHHH----HHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEEC
T ss_pred cHHHHHHHHHHHHhcCCCCeEEEeCCCchhHH----HHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEe
Confidence 568886 4 3456899999999999999886 444567888888887 2 8999999987 67889999
Q ss_pred ecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCcC----------CCCCCccEEEeccccccccCCCceeeE
Q 024619 146 ESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----------PLELGADIVMHSATKFIAGHSDVMAGV 212 (265)
Q Consensus 146 ~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~~----------~~~~~~di~~~s~sK~~~g~~g~~~G~ 212 (265)
++|+||||.+.+ +++|+++|+++|+++|+||+|+...... ....+.++++.|+||.+ |++|+|.|+
T Consensus 180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~riG~ 258 (397)
T 3fsl_A 180 PCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIF-SLYGERVGG 258 (397)
T ss_dssp SSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTT-TCGGGCCEE
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccc-cCcCCCeeE
Confidence 999999999954 6799999999999999999998655430 11345679999999999 778999999
Q ss_pred EEe
Q 024619 213 LAV 215 (265)
Q Consensus 213 v~~ 215 (265)
++.
T Consensus 259 ~~~ 261 (397)
T 3fsl_A 259 LSV 261 (397)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
No 95
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.90 E-value=2.8e-22 Score=177.86 Aligned_cols=174 Identities=18% Similarity=0.241 Sum_probs=133.8
Q ss_pred CccCCC-CCh-hHHHHHHHHHhHhC------CCceEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcC-C
Q 024619 47 YDYTRS-GNP-TRDALESLLAKLDK------ADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-K 116 (265)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g------~~~~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~-~ 116 (265)
..|.+. |.+ +++++++++.+..+ .+.++++++|++|+. ++..++++||.|+++.|+|+++. ..++ .
T Consensus 80 ~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~ 155 (435)
T 3piu_A 80 ALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFD----RDLKWR 155 (435)
T ss_dssp HHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHH----HHTTTT
T ss_pred cccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHH----HHHHHh
Confidence 356666 654 47777777765544 345666666679986 67778899999999999999987 3345 6
Q ss_pred CCeEEEeecCC-------CHHHHHhhcCC------CceEEEEecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCC
Q 024619 117 TGVVVKRVNTC-------DLDEVASAIGP------WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMS 180 (265)
Q Consensus 117 ~g~~~~~~~~~-------d~~~l~~~~~~------~~~~i~~~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~ 180 (265)
.|.+++.++.+ |++++++++.+ ++++|++++|+||||.+.+ +++|+++|++||+++|+||+|+.
T Consensus 156 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~ 235 (435)
T 3piu_A 156 TGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSG 235 (435)
T ss_dssp TCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGG
T ss_pred cCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccc
Confidence 89999988864 78999988864 7899999999999999965 58899999999999999999976
Q ss_pred CCCcCC---------CC---------CCccEEEeccccccccCCCceeeEEEeechhHHHHHH
Q 024619 181 PVLSRP---------LE---------LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 225 (265)
Q Consensus 181 ~~~~~~---------~~---------~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~ 225 (265)
+.+... .+ .+.++++.|+||++ |.+|+++|+++++++.+.....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~-g~~G~r~G~~~~~~~~~~~~~~ 297 (435)
T 3piu_A 236 TAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL-GLPGFRVGAIYSNDDMVVAAAT 297 (435)
T ss_dssp GCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSS-CCGGGCEEEEEESCHHHHHHHH
T ss_pred cccCCCCCcCHHHhccccccccccCCCCCEEEEEeeeccc-CCCceeEEEEEeCCHHHHHHHH
Confidence 443210 01 33459999999999 6678999999987666655443
No 96
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.90 E-value=8.4e-23 Score=178.04 Aligned_cols=164 Identities=20% Similarity=0.213 Sum_probs=136.6
Q ss_pred hhHHHHHHHHHhHhCCC--ceEEecchHHHHH-HHHHh-cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC---
Q 024619 55 PTRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~~i~~~~g~~al~-~~~~~-~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--- 127 (265)
+...++++.+++++|.+ .++++++|++++. ++..+ +++||+|+++.|+|+++...+...++..|.+++.++.+
T Consensus 59 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 138 (390)
T 1elu_A 59 QLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATL 138 (390)
T ss_dssp HHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGS
T ss_pred HHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCC
Confidence 45788999999999977 4666667779986 66677 78999999999999998766545556678899988863
Q ss_pred ----CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHH----HcCCEEEEeCCcCCCCCcCC-CCCCccEEEecc
Q 024619 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH----AHGALLLVDNSIMSPVLSRP-LELGADIVMHSA 198 (265)
Q Consensus 128 ----d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~----~~~~~li~D~~~~~~~~~~~-~~~~~di~~~s~ 198 (265)
|++++++.+.+++++|++++++||||.+.|+++|.++|+ ++|+++|+|++|+.+..... ...+.|++++|+
T Consensus 139 ~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~ 218 (390)
T 1elu_A 139 NQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTG 218 (390)
T ss_dssp SSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEES
T ss_pred CccchHHHHHHhcCCCceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCCCEEEccc
Confidence 689999999889999999999999999999999999999 99999999999997765422 245689999999
Q ss_pred ccccccCCCceeeEEEeechhH
Q 024619 199 TKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 199 sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
||++.++.| .|+++++++.+
T Consensus 219 ~K~~~~~~g--~G~~~~~~~~~ 238 (390)
T 1elu_A 219 HKWFAGPAG--VGGLYIHGDCL 238 (390)
T ss_dssp SSTTCCCTT--CEEEEECTTTG
T ss_pred cccccCCCc--eEEEEECHHhH
Confidence 997777766 59998887544
No 97
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.90 E-value=1.7e-23 Score=181.32 Aligned_cols=159 Identities=21% Similarity=0.226 Sum_probs=134.5
Q ss_pred hhHHHHHHH-HHhHhCCCceEEecch-HHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec--CC--
Q 024619 55 PTRDALESL-LAKLDKADRALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN--TC-- 127 (265)
Q Consensus 55 ~~~~~l~~~-l~~~~g~~~~i~~~~g-~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~-- 127 (265)
+..+++++. +++++|.+ .+++++| ++|+. ++..++++||+|++++|+|+++... ++..|.+++.++ .+
T Consensus 53 ~~~~~l~~~~la~~~~~~-~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~~ 127 (371)
T 2e7j_A 53 PPIHDFIHNQLPKFLGCD-VARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVA----AERAGLNIALVPKTDYPD 127 (371)
T ss_dssp CCHHHHHHTHHHHHTTSS-EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH----HHHTTCEEEEECCCCTTT
T ss_pred HHHHHHHHHHHHHHcCCC-EEEEeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHH----HHHcCCeEEEeecccCCC
Confidence 568899999 99999988 6666655 68986 6777789999999999999988744 466789999998 65
Q ss_pred ---CHHHHHhhcC-----CCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc-CCCCCCccEEEecc
Q 024619 128 ---DLDEVASAIG-----PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSA 198 (265)
Q Consensus 128 ---d~~~l~~~~~-----~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~s~ 198 (265)
|++++++++. +++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+..+ .....+.|++++|+
T Consensus 128 ~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~ 207 (371)
T 2e7j_A 128 YAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSG 207 (371)
T ss_dssp CCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEH
T ss_pred CCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcCCCEEEecC
Confidence 8999999887 68999999999999999999999999999999999999999987764 23344689999999
Q ss_pred ccccccCCCceeeEEEeechhH
Q 024619 199 TKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 199 sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
||+++++. ++|+++++++.+
T Consensus 208 sK~~~~~~--~~G~~~~~~~~~ 227 (371)
T 2e7j_A 208 HKSMAASG--PIGVMGMKEEWA 227 (371)
T ss_dssp HHHSSCCS--SCEEEEECTTTT
T ss_pred CcCCCCCC--CcEEEEEechhh
Confidence 99997654 579999887643
No 98
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.90 E-value=1.6e-22 Score=180.25 Aligned_cols=230 Identities=14% Similarity=0.060 Sum_probs=153.4
Q ss_pred eEeeccCCCCCCC-CCCCCeeeccccccCCC---CCCCCCccCCC-CCh-hHHHHHHHHHhHhCCC-------ceEE--e
Q 024619 12 LLMNFSNEFDPYG-ALSTPLYQTATFKQPSA---TENGPYDYTRS-GNP-TRDALESLLAKLDKAD-------RALC--F 76 (265)
Q Consensus 12 ~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~---~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~-------~~i~--~ 76 (265)
..|+|+ ...|+. ..++++..+........ .......|.+. |.+ +++++++++. |.+ .+++ +
T Consensus 50 ~~i~l~-~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~---g~~~~~~~~~~i~~~~t 125 (448)
T 3meb_A 50 KKVNLG-VGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLMF---GKDSKAAQEGRIASCQS 125 (448)
T ss_dssp TCEEES-SCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHHH---CTTCHHHHTTCEEEEEE
T ss_pred CeEEee-cccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHhc---CCCccccCcCcEEEEEC
Confidence 369999 888844 44555555433221111 12345677766 765 3666666662 443 4555 6
Q ss_pred cchHHHHHH---HHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC---C-----CHHHHHhhcC---CCceE
Q 024619 77 TSGMAALAA---VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---C-----DLDEVASAIG---PWTKL 142 (265)
Q Consensus 77 ~~g~~al~~---~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~-----d~~~l~~~~~---~~~~~ 142 (265)
++|++|+.. +..++.+||+|++++|+|+.+...+...++..|.+++.++. + |++++++++. +++++
T Consensus 126 ~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~ 205 (448)
T 3meb_A 126 LSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIF 205 (448)
T ss_dssp SHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEE
T ss_pred CcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEE
Confidence 666788843 45678899999999999999975543222377888888775 2 7899998886 45788
Q ss_pred EEEecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCcCC-----------CCCCccEEEeccccccccCCCc
Q 024619 143 VWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSRP-----------LELGADIVMHSATKFIAGHSDV 208 (265)
Q Consensus 143 i~~~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~~~-----------~~~~~di~~~s~sK~~~g~~g~ 208 (265)
+++++|+||||.+.+ +++|+++|+++|+++|+||+|........ .....++++.|+||.+ |++|+
T Consensus 206 v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~ 284 (448)
T 3meb_A 206 LFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNF-GLYGE 284 (448)
T ss_dssp EEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTS-CCGGG
T ss_pred EEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccC-CCccc
Confidence 899999999999976 56699999999999999999985444310 1123568899999999 67889
Q ss_pred eeeEE--Ee--------ech----hHHHHHHHHHHhccCCCChhHHHHHHhc
Q 024619 209 MAGVL--AV--------KGE----RLAKELYFLQNAEGSGLAPFDCWICLRG 246 (265)
Q Consensus 209 ~~G~v--~~--------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (265)
|.|++ ++ ++. .+...+...........+...+..+...
T Consensus 285 RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~ 336 (448)
T 3meb_A 285 RIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVI 336 (448)
T ss_dssp CCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHH
T ss_pred cceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHH
Confidence 99998 66 443 3333333333444444554444443333
No 99
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.90 E-value=6.7e-23 Score=179.46 Aligned_cols=163 Identities=16% Similarity=0.206 Sum_probs=134.8
Q ss_pred hhHHHHHHHHHhHhCC---CceEEecchHHHHH-HHHHh----cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC
Q 024619 55 PTRDALESLLAKLDKA---DRALCFTSGMAALA-AVTHL----LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~---~~~i~~~~g~~al~-~~~~~----~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 126 (265)
+..+++++.+++++|. +.++++++|++|+. ++..+ +++||+|++++|+|++....+...++..|.+++.++.
T Consensus 67 ~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 146 (406)
T 1kmj_A 67 EKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPL 146 (406)
T ss_dssp HHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECB
T ss_pred HHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEec
Confidence 3478899999999998 24555566679986 66777 7899999999999998765555556667889988886
Q ss_pred C-----CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc-CCCCCCccEEEecccc
Q 024619 127 C-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATK 200 (265)
Q Consensus 127 ~-----d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~s~sK 200 (265)
+ |++++++++.+++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+... .....+.|++++|+||
T Consensus 147 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K 226 (406)
T 1kmj_A 147 NPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHK 226 (406)
T ss_dssp CTTSCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGG
T ss_pred CCCCCcCHHHHHHHhccCCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEEchh
Confidence 4 789999999989999999999999999999999999999999999999999987653 2223468999999999
Q ss_pred ccccCCCceeeEEEeechhH
Q 024619 201 FIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 201 ~~~g~~g~~~G~v~~~~~~~ 220 (265)
++ |++| +|+++++++.+
T Consensus 227 ~~-g~~G--~G~~~~~~~~~ 243 (406)
T 1kmj_A 227 LY-GPTG--IGILYVKEALL 243 (406)
T ss_dssp TT-SCTT--CEEEEECHHHH
T ss_pred cc-CCCC--cEEEEEeHHHH
Confidence 98 7777 59998876443
No 100
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.90 E-value=3.4e-23 Score=182.15 Aligned_cols=162 Identities=14% Similarity=0.130 Sum_probs=135.0
Q ss_pred hhHHHHHHHHHhHhCCCc--eE-EecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC---
Q 024619 55 PTRDALESLLAKLDKADR--AL-CFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~--~i-~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--- 127 (265)
+..+++++++++++|.+. .+ ++++|++++. ++..++++||+|++++|.|++.. +...++..|.+++.++.+
T Consensus 44 ~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 121 (416)
T 3isl_A 44 GIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYL--LTEIAERYGANVHMLECEWGT 121 (416)
T ss_dssp HHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHH--HHHHHHhcCCeeEEEecCCCC
Confidence 458899999999999873 33 4456668886 67778999999999999997622 235567789999999876
Q ss_pred --CHHHHHhhcC-CCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc-CCCCCCccEEEeccccccc
Q 024619 128 --DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (265)
Q Consensus 128 --d~~~l~~~~~-~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~s~sK~~~ 203 (265)
|++++++++. +++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+... .....+.|++++|++|++.
T Consensus 122 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l~ 201 (416)
T 3isl_A 122 VFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLS 201 (416)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTC
T ss_pred CCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCccccC
Confidence 8999999997 68999999999999999999999999999999999999999987764 3344578999999999977
Q ss_pred cCCCceeeEEEeechhH
Q 024619 204 GHSDVMAGVLAVKGERL 220 (265)
Q Consensus 204 g~~g~~~G~v~~~~~~~ 220 (265)
++.| .|+++.+++.+
T Consensus 202 g~~g--~g~~~~~~~~~ 216 (416)
T 3isl_A 202 VPSG--MAPITYNERVA 216 (416)
T ss_dssp CCSS--EEEEEECHHHH
T ss_pred CCCC--eEEEEECHHHH
Confidence 8877 58888877654
No 101
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.90 E-value=9.1e-24 Score=183.30 Aligned_cols=159 Identities=19% Similarity=0.189 Sum_probs=131.6
Q ss_pred hhHHHHHHHHHhHhCCC-c-eEEecchHHHHH-HHHHhc----CCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC
Q 024619 55 PTRDALESLLAKLDKAD-R-ALCFTSGMAALA-AVTHLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~-~-~i~~~~g~~al~-~~~~~~----~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 127 (265)
+..+++++++++++|.+ + ++++++|++++. ++..+. ++||+|+++++.|+++...+. .++..|++++.++.+
T Consensus 43 ~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~ 121 (382)
T 4hvk_A 43 EAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQGFEVEYIPVG 121 (382)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHHHTTCEEEEECBC
T ss_pred HHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHH-HHHhcCCEEEEeccC
Confidence 45889999999999987 3 555555568886 566666 899999999999999887653 335578999999865
Q ss_pred -----CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCC-CCCCccEEEeccccc
Q 024619 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP-LELGADIVMHSATKF 201 (265)
Q Consensus 128 -----d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~-~~~~~di~~~s~sK~ 201 (265)
|++++++++.+++++|++++++||||.+.|+++|.++|+++|+ +|+|++|+.+..... ...+.|++++|+||+
T Consensus 122 ~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~ 200 (382)
T 4hvk_A 122 KYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKIGADMLTISSNDI 200 (382)
T ss_dssp TTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHTCSEEEEESGGG
T ss_pred CCCCcCHHHHHHHhccCceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcCCCEEEEeHHHh
Confidence 8999999999999999999999999999999999999999999 999999988766432 234789999999997
Q ss_pred cccCCCceeeEEEeech
Q 024619 202 IAGHSDVMAGVLAVKGE 218 (265)
Q Consensus 202 ~~g~~g~~~G~v~~~~~ 218 (265)
+ |+.| .|+++++++
T Consensus 201 ~-g~~g--~g~~~~~~~ 214 (382)
T 4hvk_A 201 Y-GPKG--VGALWIRKE 214 (382)
T ss_dssp T-SCTT--CEEEEEETT
T ss_pred c-CCCc--eEEEEEcCc
Confidence 6 6766 477777664
No 102
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.90 E-value=2e-22 Score=177.48 Aligned_cols=196 Identities=14% Similarity=0.098 Sum_probs=136.2
Q ss_pred eeEeeccCCCCCCCC---C-CCCeeeccccc-cCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhC----CCceEE--ec
Q 024619 11 TLLMNFSNEFDPYGA---L-STPLYQTATFK-QPSATENGPYDYTRS-GNP-TRDALESLLAKLDK----ADRALC--FT 77 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~---~-~~~~~~~~~~~-~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g----~~~~i~--~~ 77 (265)
..+++|+ .++|+.. . ++|.+...... .. .....+.|++. |.+ +++++++++...+| .+++++ ++
T Consensus 29 ~~~i~l~-~g~~~d~~~~~~~~~~v~~a~~~~~~--~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~ 105 (412)
T 1yaa_A 29 ATKVDLG-IGAYRDDNGKPWVLPSVKAAEKLIHN--DSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSL 105 (412)
T ss_dssp SSCEECS-SCCCBCTTSCBCCCHHHHHHHHHHHT--CTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEE
T ss_pred CCeEEEe-eeeeeCCCCCCCCcHHHHHHHHhhhc--CcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEecc
Confidence 4579999 7776332 2 22333332211 11 11123467655 665 47888888766544 445555 66
Q ss_pred chHHHHHHH---HHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC-------CCHHHHHhhcCCC---ceEEE
Q 024619 78 SGMAALAAV---THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------CDLDEVASAIGPW---TKLVW 144 (265)
Q Consensus 78 ~g~~al~~~---~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~---~~~i~ 144 (265)
+|++|+.++ ...+++||+|++++|+|+++.. .++..|.+++.++. .|++++++++.++ +.+++
T Consensus 106 g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 181 (412)
T 1yaa_A 106 SGTGALHISAKFFSKFFPDKLVYLSKPTWANHMA----IFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVL 181 (412)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHH----HHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEE
T ss_pred chHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHH----HHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEE
Confidence 667888643 4556899999999999999974 44567888888876 2789998887532 45556
Q ss_pred EecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCcC------CC-----CCC---ccEEEeccccccccCCC
Q 024619 145 VESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR------PL-----ELG---ADIVMHSATKFIAGHSD 207 (265)
Q Consensus 145 ~~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~~------~~-----~~~---~di~~~s~sK~~~g~~g 207 (265)
+++|+||||.+.+ +++|+++|+++|+++|+||+|+...+.. +. ... .+++++|+||.+ |++|
T Consensus 182 ~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G 260 (412)
T 1yaa_A 182 HSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNA-GMYG 260 (412)
T ss_dssp ECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTS-CCGG
T ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCC-CCcC
Confidence 6999999999965 6789999999999999999996433221 11 122 579999999999 6889
Q ss_pred ceeeEEE
Q 024619 208 VMAGVLA 214 (265)
Q Consensus 208 ~~~G~v~ 214 (265)
+|.|+++
T Consensus 261 lriG~~~ 267 (412)
T 1yaa_A 261 ERVGCFH 267 (412)
T ss_dssp GCEEEEE
T ss_pred CcceEEE
Confidence 9999998
No 103
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.90 E-value=2.2e-22 Score=176.61 Aligned_cols=187 Identities=24% Similarity=0.309 Sum_probs=144.4
Q ss_pred hhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHh-cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-----
Q 024619 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~-~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (265)
+...++++.+++++|.++.+++++|++|+. ++..+ +++||+|+++.|+|+++.. .++..|.+++.++.+
T Consensus 63 ~~~~~l~~~la~~~~~~~~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~ 138 (399)
T 2oga_A 63 PELEGFEAEFAAYCETDHAVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIASWL----AVSATGATPVPVEPHEDHPT 138 (399)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHH----HHHHTTCEEEEECBCSSSSS
T ss_pred hhHHHHHHHHHHHHCCCeEEEecCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHH----HHHHCCCEEEEEecCCCCCC
Confidence 668899999999999988999999999986 66777 7899999999999999874 345578898888753
Q ss_pred -CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCCC--ccEEEecc--cccc
Q 024619 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSA--TKFI 202 (265)
Q Consensus 128 -d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~--~di~~~s~--sK~~ 202 (265)
|++++++++.+++++|+ ++||||.+.|+++|.++|+++|+++|+|++|+.+........+ .|+++.|+ +|++
T Consensus 139 ~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~~~sK~~ 215 (399)
T 2oga_A 139 LDPLLVEKAITPRTRALL---PVHLYGHPADMDALRELADRHGLHIVEDAAQAHGARYRGRRIGAGSSVAAFSFYPGKNL 215 (399)
T ss_dssp BCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTEETTCTTCEEEEECCTTSSS
T ss_pred cCHHHHHHhcCCCCeEEE---EeCCcCCccCHHHHHHHHHHcCCEEEEECcccccCccCCeecccccCEEEEeCCCCccC
Confidence 78999999988888887 5689999999999999999999999999999877533222223 58999999 6999
Q ss_pred ccCCCceeeEEEeechhHHHHHHHHHHhc------------cCCCChhHHHHHHhccCch
Q 024619 203 AGHSDVMAGVLAVKGERLAKELYFLQNAE------------GSGLAPFDCWICLRGVKTM 250 (265)
Q Consensus 203 ~g~~g~~~G~v~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~~ 250 (265)
+++| ++|+++.+++.+.+.+....... ...+++..++.+...++.+
T Consensus 216 -~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~ 273 (399)
T 2oga_A 216 -GCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHL 273 (399)
T ss_dssp -CCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTH
T ss_pred -CcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHH
Confidence 5656 78999887555555444443321 1234566666555555544
No 104
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.89 E-value=2.4e-22 Score=173.56 Aligned_cols=221 Identities=14% Similarity=0.173 Sum_probs=149.4
Q ss_pred cceeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCC--ceEEecchHHHHHHH
Q 024619 9 VSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALAAV 86 (265)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~--~~i~~~~g~~al~~~ 86 (265)
.+..+|+|+...++++ ++|.+......... ....|+. +...++++.++++++.+ .++++++|++++.++
T Consensus 24 ~~~~~idl~~~~~~~~--~~~~v~~a~~~~~~----~~~~y~~---~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~ 94 (361)
T 3ftb_A 24 KGRELLDYSSNINPLG--IPKSFLNNIDEGIK----NLGVYPD---VNYRRLNKSIENYLKLKDIGIVLGNGASEIIELS 94 (361)
T ss_dssp ----CEETTCCCCTTC--SCHHHHTTHHHHHH----GGGSCCC---TTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHH
T ss_pred CCCCEEEecCCCCCCC--CCHHHHHHHHHHHH----HhcCCCC---ccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHH
Confidence 3457899994334444 23333332211111 1234432 33577888888888864 355555566999765
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-----CHHHHHhhcCCCceEEEEecCCCCcccccc---H
Q 024619 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICD---I 158 (265)
Q Consensus 87 ~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~~~~~~~~i~~~~~~np~G~~~~---l 158 (265)
...+ |+|+++.|+|+++.. .++..|.+++.++.+ +++++++++.+ +++|++++|+||||.+.+ +
T Consensus 95 ~~~~---d~vi~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l 166 (361)
T 3ftb_A 95 ISLF---EKILIIVPSYAEYEI----NAKKHGVSVVFSYLDENMCIDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKF 166 (361)
T ss_dssp HTTC---SEEEEEESCCTHHHH----HHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHHHH
T ss_pred HHHc---CcEEEecCChHHHHH----HHHHcCCeEEEeecCcccCCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHH
Confidence 5555 999999999999874 445578999988854 56899999988 999999999999999975 6
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCc-------CCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhc
Q 024619 159 RKIAEMAHAHGALLLVDNSIMSPVLS-------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 231 (265)
Q Consensus 159 ~~i~~~a~~~~~~li~D~~~~~~~~~-------~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~ 231 (265)
++|+++|++||+++|+||+|+..... .....+.++++.|+||++ +++|+++|+++..++.+.+.+.... .
T Consensus 167 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~g~~~~~~~~~~~~~~~~~--~ 243 (361)
T 3ftb_A 167 IHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFF-AMPGIRFGYGITNNKEIAAKIKAKQ--N 243 (361)
T ss_dssp HHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTT-SCGGGCCEEEEESCHHHHHHHHTTS--C
T ss_pred HHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhc-CCCCcceeEEEeCCHHHHHHHHhhC--C
Confidence 78888999999999999999754431 112335668999999999 6678999999845555544333222 2
Q ss_pred cCCCChhHHHHHHhccCc
Q 024619 232 GSGLAPFDCWICLRGVKT 249 (265)
Q Consensus 232 ~~~~~~~~~~~~~~~l~~ 249 (265)
....++.....+...++.
T Consensus 244 ~~~~~~~~~~~~~~~l~~ 261 (361)
T 3ftb_A 244 PWNINCFAEMAAINCLKD 261 (361)
T ss_dssp TTCSCHHHHHHHHHTSSC
T ss_pred CCCCCHHHHHHHHHHhcC
Confidence 235566666666666664
No 105
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.89 E-value=2.2e-22 Score=174.96 Aligned_cols=160 Identities=16% Similarity=0.152 Sum_probs=131.9
Q ss_pred hHHHHHHHHHhHhCCC--ceEEecchHHHHH-HHHHhc----CCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC--
Q 024619 56 TRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-- 126 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~g~~al~-~~~~~~----~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~-- 126 (265)
..+++++.+++++|.+ .++++++|++++. ++..+. ++||+|++++|+|+++...+. .++..|.+++.++.
T Consensus 45 ~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~ 123 (384)
T 1eg5_A 45 HMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMK-YLSMKGFKVKYVPVDS 123 (384)
T ss_dssp HHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHH-HHHHTTCEEEECCBCT
T ss_pred HHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHH-HHHhcCCEEEEEccCC
Confidence 4788999999999976 4666666679986 566666 799999999999998865542 33556889999886
Q ss_pred ---CCHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcC--CEEEEeCCcCCCCCc-CCCCCCccEEEecccc
Q 024619 127 ---CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG--ALLLVDNSIMSPVLS-RPLELGADIVMHSATK 200 (265)
Q Consensus 127 ---~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~--~~li~D~~~~~~~~~-~~~~~~~di~~~s~sK 200 (265)
.|++++++++.+++++|++++++||||.+.|+++|.++|+++| +++|+||+|+.+... .....+.|++++|+||
T Consensus 124 ~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK 203 (384)
T 1eg5_A 124 RGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHK 203 (384)
T ss_dssp TSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGG
T ss_pred CCccCHHHHHHHhCCCCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEecHHH
Confidence 3899999999889999999999999999999999999999999 999999999866543 2223468999999999
Q ss_pred ccccCCCceeeEEEeechh
Q 024619 201 FIAGHSDVMAGVLAVKGER 219 (265)
Q Consensus 201 ~~~g~~g~~~G~v~~~~~~ 219 (265)
++ |++| .|+++++++.
T Consensus 204 ~~-g~~G--~G~~~~~~~~ 219 (384)
T 1eg5_A 204 FH-GPKG--VGITYIRKGV 219 (384)
T ss_dssp GT-SCTT--CEEEEECTTS
T ss_pred hc-CCCc--eEEEEEcCCC
Confidence 87 6777 4898888753
No 106
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.89 E-value=4.9e-23 Score=180.05 Aligned_cols=160 Identities=17% Similarity=0.253 Sum_probs=132.4
Q ss_pred hhHHHHHHHHHhHhCCC-c-eEEe-cchHHHHH-HHHHhcCCCCEEEEcCCCCCC--hHHHHHhhcCCCCeEEEeecC--
Q 024619 55 PTRDALESLLAKLDKAD-R-ALCF-TSGMAALA-AVTHLLGTGEEIVAGDDLYGG--TDRLLSRVTPKTGVVVKRVNT-- 126 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~-~-~i~~-~~g~~al~-~~~~~~~~g~~viv~~~~~~~--~~~~~~~~~~~~g~~~~~~~~-- 126 (265)
+.++++++++++++|.+ + .+++ ++|++|+. ++..++++||+|++++|+|++ +. ..++..|.+++.++.
T Consensus 67 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~~~g~~~~~v~~~~ 142 (393)
T 1vjo_A 67 ALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGNRLV----DMAGRYGADVRTISKPW 142 (393)
T ss_dssp HHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHH----HHHHHTTCEEEEEECCT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCChhHHHHH----HHHHHcCCceEEEecCC
Confidence 46899999999999986 4 4544 55568986 677788999999999999987 54 445667889988885
Q ss_pred ---CCHHHHHhhcCC-CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc-CCCCCCccEEEeccccc
Q 024619 127 ---CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (265)
Q Consensus 127 ---~d~~~l~~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~s~sK~ 201 (265)
.|++++++++.+ ++++|++++|+||||.+.|+++|.++|+++|+++|+||+|+.+... .....+.|++++|+||+
T Consensus 143 ~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~ 222 (393)
T 1vjo_A 143 GEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKG 222 (393)
T ss_dssp TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSST
T ss_pred CCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCccc
Confidence 489999999887 8999999999999999999999999999999999999999966543 22234689999999999
Q ss_pred cccCCCceeeEEEeechhH
Q 024619 202 IAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 202 ~~g~~g~~~G~v~~~~~~~ 220 (265)
+++++ +.|+++++++.+
T Consensus 223 l~~~~--~~G~l~~~~~~~ 239 (393)
T 1vjo_A 223 LGCSP--GASPFTMSSRAI 239 (393)
T ss_dssp TCSCS--SCEEEEECHHHH
T ss_pred ccCCC--ceEEEEECHHHH
Confidence 97765 469998887644
No 107
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.89 E-value=2e-23 Score=181.53 Aligned_cols=159 Identities=19% Similarity=0.202 Sum_probs=130.9
Q ss_pred hhHHHHHHHHHhHhCCC--ceEEecchHHHHH-HHHHhc----CCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC-
Q 024619 55 PTRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT- 126 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~~i~~~~g~~al~-~~~~~~----~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~- 126 (265)
+..+++++++++++|.+ .++++++|++|+. ++..+. ++||+|++++|+|+++...+. .++..|++++.++.
T Consensus 43 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~ 121 (382)
T 4eb5_A 43 EAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQGFEVEYIPVG 121 (382)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHTTTTCEEEEECBC
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHH-HHHhCCcEEEEeccC
Confidence 45889999999999986 4555556679986 566666 899999999999998876653 34567999999986
Q ss_pred ----CCHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCC-CCCCccEEEeccccc
Q 024619 127 ----CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP-LELGADIVMHSATKF 201 (265)
Q Consensus 127 ----~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~-~~~~~di~~~s~sK~ 201 (265)
.|++++++++.+++++|++++++||||.+.|+++|.++|+++|++ |+|++|+.+..... ...+.|++++|+||+
T Consensus 122 ~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~~s~sK~ 200 (382)
T 4eb5_A 122 KYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLTISSNDI 200 (382)
T ss_dssp TTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEEEETGGG
T ss_pred CCCccCHHHHHHHhcCCCeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCccccCCCEEEeehHHh
Confidence 389999999988899999999999999999999999999999999 99999997654321 223689999999998
Q ss_pred cccCCCceeeEEEeech
Q 024619 202 IAGHSDVMAGVLAVKGE 218 (265)
Q Consensus 202 ~~g~~g~~~G~v~~~~~ 218 (265)
+ |++|+ |+++++++
T Consensus 201 ~-g~~g~--G~~~~~~~ 214 (382)
T 4eb5_A 201 Y-GPKGV--GALWIRKE 214 (382)
T ss_dssp T-CCSSC--EEEEEETT
T ss_pred c-CCCce--EEEEEccc
Confidence 6 67774 77777765
No 108
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.89 E-value=9.1e-23 Score=180.60 Aligned_cols=193 Identities=15% Similarity=0.078 Sum_probs=138.0
Q ss_pred CCccCCC-CChhHHHHHHHHHhHhCCC-ceEEecch-HHHH--H-HHHHhcC--C----------CCEEEEcCCCCCChH
Q 024619 46 PYDYTRS-GNPTRDALESLLAKLDKAD-RALCFTSG-MAAL--A-AVTHLLG--T----------GEEIVAGDDLYGGTD 107 (265)
Q Consensus 46 ~~~y~~~-g~~~~~~l~~~l~~~~g~~-~~i~~~~g-~~al--~-~~~~~~~--~----------g~~viv~~~~~~~~~ 107 (265)
.+.|++. |.+ ++++.++++++.+ +.+++++| ++++ . ++..+++ + ||+|++++|+|+.+.
T Consensus 71 ~~~Y~~~~g~~---~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~ 147 (427)
T 3ppl_A 71 VRNYGGLDGIV---DIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHF 147 (427)
T ss_dssp TTSSCCSSCCH---HHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHH
T ss_pred hcCCCCCCCcH---HHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHH
Confidence 4667665 554 4445555555665 45555555 5888 3 5566666 6 899999999999887
Q ss_pred HHHHhhcCCCCeEEEeecCC----CHHHHHhhcC-CCceEEEEe-cCCCCccccccHH---HHHHHH-HHcCCEEEEeCC
Q 024619 108 RLLSRVTPKTGVVVKRVNTC----DLDEVASAIG-PWTKLVWVE-SPTNPRQQICDIR---KIAEMA-HAHGALLLVDNS 177 (265)
Q Consensus 108 ~~~~~~~~~~g~~~~~~~~~----d~~~l~~~~~-~~~~~i~~~-~~~np~G~~~~l~---~i~~~a-~~~~~~li~D~~ 177 (265)
..++..|.+++.++.+ |++++++++. +++++|+++ +++||||.+.+.+ +|+++| +++|+++|+||+
T Consensus 148 ----~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~ 223 (427)
T 3ppl_A 148 ----SITERFGFEMISVPMNEDGPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNA 223 (427)
T ss_dssp ----HHHHHTTCEEEEEEEETTEECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECT
T ss_pred ----HHHHHcCCEEEEeCCCCCCCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECC
Confidence 4446678898888764 8999999995 678988865 8999999998765 899999 999999999999
Q ss_pred cCCCCCcC-------C-------CCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHH
Q 024619 178 IMSPVLSR-------P-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 243 (265)
Q Consensus 178 ~~~~~~~~-------~-------~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (265)
|+...+.. . ...+.+++++|+||++ + +|+|+|+++.+++ +...+...........+...+..+
T Consensus 224 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~-~G~r~G~~~~~~~-l~~~~~~~~~~~~~~~~~~~q~~~ 300 (427)
T 3ppl_A 224 YAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKIT-L-AGAGVSFFLTSAE-NRKWYTGHAGIRGIGPNKVNQLAH 300 (427)
T ss_dssp TTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTS-C-TTSSCEEEECCHH-HHHHHHHHHHHHCSCCCHHHHHHH
T ss_pred CcccccCCCCCCccchhhhhhccCCCCcEEEEechhhcc-C-cCccEEEEEcCHH-HHHHHHHHhhcccCCCCHHHHHHH
Confidence 98643321 1 1346789999999983 4 4799999988765 444455555555555665555544
Q ss_pred HhccC
Q 024619 244 LRGVK 248 (265)
Q Consensus 244 ~~~l~ 248 (265)
...++
T Consensus 301 ~~~l~ 305 (427)
T 3ppl_A 301 ARYFG 305 (427)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 44443
No 109
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.89 E-value=1.1e-22 Score=177.54 Aligned_cols=161 Identities=17% Similarity=0.198 Sum_probs=131.1
Q ss_pred hHHHHHHHHHhHhCCC-c-eEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-----
Q 024619 56 TRDALESLLAKLDKAD-R-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~-~-~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (265)
..+++++.+++++|.+ + ++++++|++++. ++..++++||+|++++|+|+++. +...++..|.+++.++.+
T Consensus 43 ~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~ 120 (392)
T 2z9v_A 43 LYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVLNLASGVYGKG--FGYWAKRYSPHLLEIEVPYNEAI 120 (392)
T ss_dssp HHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEESSHHHHH--HHHHHHHHCSCEEEEECCTTSCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEecCCcccHH--HHHHHHHcCCceEEeeCCCCCCC
Confidence 4789999999999976 4 555566678986 66777899999999999998763 224445567788887753
Q ss_pred CHHHHHhhc--CCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcC-CCCCCccEEEecccccccc
Q 024619 128 DLDEVASAI--GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATKFIAG 204 (265)
Q Consensus 128 d~~~l~~~~--~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~-~~~~~~di~~~s~sK~~~g 204 (265)
|++++++++ .+++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+.... ....+.|++++|+||++.+
T Consensus 121 d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~ 200 (392)
T 2z9v_A 121 DPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGA 200 (392)
T ss_dssp CHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTCC
T ss_pred CHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccccceEEEecCcccccC
Confidence 799999988 4689999999999999999999999999999999999999998766542 2334689999999998878
Q ss_pred CCCceeeEEEeechhH
Q 024619 205 HSDVMAGVLAVKGERL 220 (265)
Q Consensus 205 ~~g~~~G~v~~~~~~~ 220 (265)
++|+ |+++++++.+
T Consensus 201 ~~g~--G~l~~~~~~~ 214 (392)
T 2z9v_A 201 PPGL--TMMGVSERAW 214 (392)
T ss_dssp CSCC--EEEEECHHHH
T ss_pred CCce--eEEEECHHHH
Confidence 8875 8888877544
No 110
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.89 E-value=1.1e-22 Score=174.99 Aligned_cols=197 Identities=22% Similarity=0.231 Sum_probs=135.0
Q ss_pred eeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHh
Q 024619 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL 89 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~ 89 (265)
+.+|+|+ ++-... ++|.+.... .... .....|.+ .+...++++.+++++|.++.+++++|++++. ++..+
T Consensus 3 ~~~i~~~-~~~~~~--p~~~~~~a~-~~~~---~~~~~y~~--~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~~~~~~ 73 (347)
T 1jg8_A 3 HMMIDLR-SDTVTK--PTEEMRKAM-AQAE---VGDDVYGE--DPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAH 73 (347)
T ss_dssp --CEECS-CGGGCC--CCHHHHHHH-HTCC---CCCGGGTC--CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHH
T ss_pred ceEEEec-cccCCC--CCHHHHHHH-hcCC---CCCcccCC--ChHHHHHHHHHHHHhCCceEEEecCcHHHHHHHHHHh
Confidence 5678888 443332 333333322 1111 11234544 3668899999999999998999999998875 66777
Q ss_pred cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC----CCHHHHHhhcCC------CceEEEEecCCCCc-ccccc-
Q 024619 90 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----CDLDEVASAIGP------WTKLVWVESPTNPR-QQICD- 157 (265)
Q Consensus 90 ~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~d~~~l~~~~~~------~~~~i~~~~~~np~-G~~~~- 157 (265)
+++||+|++++|+|.+..... ..++..|++++.+.. .|++++++++.+ ++++|++++|+||| |.+.+
T Consensus 74 ~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~ 152 (347)
T 1jg8_A 74 TQRGDEVILEADSHIFWYEVG-AMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPL 152 (347)
T ss_dssp CCTTCEEEEETTCHHHHSSTT-HHHHHTCCEEEEECEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCH
T ss_pred cCCCCEEEEcCcchhhhcccc-chhhccCeEEEEecCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcH
Confidence 899999999999986532100 123446788877721 289999999874 68999999999999 99865
Q ss_pred --HHHHHHHHHHcCCEEEEeCCcCCCCC---c-C--CCCCCccEEEeccccccccCCCceeeEEEeechhH
Q 024619 158 --IRKIAEMAHAHGALLLVDNSIMSPVL---S-R--PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 158 --l~~i~~~a~~~~~~li~D~~~~~~~~---~-~--~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
+++|+++|+++|+++++|++|..+.. + . ....+.|.++.|+||+++++ .+++++.+++.+
T Consensus 153 ~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~---~G~~~~~~~~~~ 220 (347)
T 1jg8_A 153 ENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAP---VGSVVVGDRDFI 220 (347)
T ss_dssp HHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCS---SCEEEEECHHHH
T ss_pred HHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCC---ceEEEEcCHHHH
Confidence 57899999999999999998753211 1 1 11225778888999999654 244565555433
No 111
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.89 E-value=1.7e-22 Score=176.33 Aligned_cols=197 Identities=12% Similarity=0.095 Sum_probs=154.8
Q ss_pred hhHHHHHHHH-HhHhC-CCceEEecchHHHHH-HHHHh-cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC---
Q 024619 55 PTRDALESLL-AKLDK-ADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (265)
Q Consensus 55 ~~~~~l~~~l-~~~~g-~~~~i~~~~g~~al~-~~~~~-~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--- 127 (265)
+..+++++.+ ++++| .++++++++|++|+. ++..+ +++||+|+++.++|+++... ++..|++++.++++
T Consensus 36 ~~~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~~~----~~~~G~~~~~v~~~~~~ 111 (377)
T 3ju7_A 36 PINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATPLA----AIWCGLEPYFIDISIDD 111 (377)
T ss_dssp HHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHHHH----HHHTTCEEEEECBCTTT
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHH----HHHcCCEEEEEecCCcc
Confidence 6789999999 99999 778999999999986 66777 89999999999999998743 45679999998864
Q ss_pred ---CHHHHHhhc-CCC--ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCC---CccEEEecc
Q 024619 128 ---DLDEVASAI-GPW--TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLEL---GADIVMHSA 198 (265)
Q Consensus 128 ---d~~~l~~~~-~~~--~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~---~~di~~~s~ 198 (265)
|++++++++ .++ +++|+ ++||+|.+.|+++|.++|+ +|+++|+|++|+.|........ ..|+.+.|+
T Consensus 112 ~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~ 187 (377)
T 3ju7_A 112 WYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSF 187 (377)
T ss_dssp CSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEEC
T ss_pred CCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEEC
Confidence 899999988 556 88887 6788999999999999999 9999999999998865322222 246766665
Q ss_pred --ccccccCCCceeeEEEeechhHHHHHHHHHHhc------------cCCCChhHHHHHHhccCchHhhHHHHhhchh
Q 024619 199 --TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE------------GSGLAPFDCWICLRGVKTMALRVEKQQVCFF 262 (265)
Q Consensus 199 --sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 262 (265)
+|++++ | .+|+++.+++.+.+....+.... ...+++..+++.+.+++.+..+.++.++++.
T Consensus 188 ~~~K~l~~--g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l~~~~~~~~~~~~ 262 (377)
T 3ju7_A 188 HATKPFGI--G-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKWDDKLKERTRISE 262 (377)
T ss_dssp BTTSSSCC--B-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCCcCCC--C-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 699964 3 37999888877766655554422 3457778888888888877666666665554
No 112
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.89 E-value=2.4e-22 Score=175.55 Aligned_cols=156 Identities=23% Similarity=0.315 Sum_probs=128.6
Q ss_pred ChhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHh-cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC----
Q 024619 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (265)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~-~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (265)
.+..+++++.+++++|.++.+++++|++|+. ++..+ +++||+|+++.|+|+++.. .++..|.+++.++++
T Consensus 37 ~~~~~~l~~~la~~~~~~~~i~~~sGt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~----~~~~~g~~~~~v~~~~~~~ 112 (388)
T 1b9h_A 37 GDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQ----AAQRLGAVTVPVDVDAATY 112 (388)
T ss_dssp CSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHH----HHHHTTCEEEEECBCTTTC
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHHHHH----HHHHcCCEEEEEecCCCcC
Confidence 3678899999999999998999999999986 66777 7899999999999999974 345678899888753
Q ss_pred --CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcC---CCCCCccEEEeccc--c
Q 024619 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR---PLELGADIVMHSAT--K 200 (265)
Q Consensus 128 --d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~---~~~~~~di~~~s~s--K 200 (265)
|++++++++.+++++|+ |+||||.+.++++|.++|+++|+++|+|++|+.|.... ....+ |+.+.||| |
T Consensus 113 ~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~-~i~~~S~s~~K 188 (388)
T 1b9h_A 113 NLDPEAVAAAVTPRTKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELD-SIATFSFQNGK 188 (388)
T ss_dssp CBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGGSS-SCEEEECCTTS
T ss_pred CCCHHHHHHhcCcCceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCeeccccc-ceEEEEccCCC
Confidence 79999999988888877 89999999999999999999999999999999766431 11222 67777877 7
Q ss_pred ccccCCCceeeEEEeechhH
Q 024619 201 FIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 201 ~~~g~~g~~~G~v~~~~~~~ 220 (265)
+++|+ ++|+++.+++.+
T Consensus 189 ~l~g~---~~G~~~~~~~~~ 205 (388)
T 1b9h_A 189 LMTAG---EGGAVVFPDGET 205 (388)
T ss_dssp SSCSS---SCEEEEECTTCH
T ss_pred cccCC---CeEEEEECCHHH
Confidence 77442 579998887644
No 113
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.89 E-value=1.4e-22 Score=177.82 Aligned_cols=161 Identities=24% Similarity=0.212 Sum_probs=131.9
Q ss_pred hhHHHHHHHHHhHhCCC-c-eEEecchHHHHH-HHHHh---cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-
Q 024619 55 PTRDALESLLAKLDKAD-R-ALCFTSGMAALA-AVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~-~-~i~~~~g~~al~-~~~~~---~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~- 127 (265)
+..+++++.+++++|.+ + ++++++|++++. ++..+ +++||+|+++.|+|+++...+...++..|.+++.++.+
T Consensus 69 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~ 148 (406)
T 3cai_A 69 AVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDI 148 (406)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCT
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCc
Confidence 45889999999999987 4 445555568886 44555 68999999999999988766644445568899999875
Q ss_pred -----CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc-CCCCCCccEEEeccccc
Q 024619 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (265)
Q Consensus 128 -----d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~s~sK~ 201 (265)
|++++++++.+++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+... .....+.|++++|+||+
T Consensus 149 ~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~ 228 (406)
T 3cai_A 149 ETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAW 228 (406)
T ss_dssp TTCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCCSEEEEEGGGG
T ss_pred ccCCcCHHHHHHHhCCCceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhcCCCEEEeehhhh
Confidence 899999999989999999999999999999999999999999999999999977653 22334789999999998
Q ss_pred cccCCCceee-EEEeechh
Q 024619 202 IAGHSDVMAG-VLAVKGER 219 (265)
Q Consensus 202 ~~g~~g~~~G-~v~~~~~~ 219 (265)
+ ||. +| +++++++.
T Consensus 229 ~-g~~---~G~~~~~~~~~ 243 (406)
T 3cai_A 229 G-GPP---IGAMVFRDPSV 243 (406)
T ss_dssp T-SCS---CEEEEESCHHH
T ss_pred c-CCC---cCeEEEEehHH
Confidence 7 553 56 99887643
No 114
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.89 E-value=2.7e-22 Score=172.44 Aligned_cols=158 Identities=16% Similarity=0.136 Sum_probs=127.9
Q ss_pred hHHHHHHHHHhHhCCC--ceEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-----
Q 024619 56 TRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (265)
..+++++++++++|.+ .++++++|++++. ++..++++||+|++++|+|+++. +...++..|.+++.++.+
T Consensus 35 ~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~ 112 (352)
T 1iug_A 35 VFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSER--FYEIALEAGLVVERLDYPYGDTP 112 (352)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTCCC
T ss_pred HHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCCCCC
Confidence 4789999999999987 3555556679986 67777899999999999998875 224445678899888763
Q ss_pred CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHc--CCEEEEeCCcCCCCCcC-CCCCCccEEEecccccccc
Q 024619 128 DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVLSR-PLELGADIVMHSATKFIAG 204 (265)
Q Consensus 128 d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~--~~~li~D~~~~~~~~~~-~~~~~~di~~~s~sK~~~g 204 (265)
|++++++ +++++|++++++||||.+.|+++|.++|+++ |+++|+|++|+.+.... ....+.|++++|+||++.+
T Consensus 113 d~~~l~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~ 189 (352)
T 1iug_A 113 RPEDVAK---EGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMC 189 (352)
T ss_dssp CTTTSCC---SSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCC
T ss_pred CHHHHhc---cCCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccccC
Confidence 5666665 6789999999999999999999999999999 99999999998765532 2234689999999998878
Q ss_pred CCCceeeEEEeechhH
Q 024619 205 HSDVMAGVLAVKGERL 220 (265)
Q Consensus 205 ~~g~~~G~v~~~~~~~ 220 (265)
+.| .|+++++++.+
T Consensus 190 ~~g--~G~~~~~~~~~ 203 (352)
T 1iug_A 190 PPG--LGFVALSPRAL 203 (352)
T ss_dssp CSC--EEEEEECHHHH
T ss_pred CCc--eeEEEECHHHH
Confidence 877 48888877654
No 115
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.89 E-value=3.7e-23 Score=178.62 Aligned_cols=204 Identities=15% Similarity=0.074 Sum_probs=143.0
Q ss_pred ccCCCCCCCCCCCCeeeccccccCCCC--CCCCCccCCCCChhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHhcCC
Q 024619 16 FSNEFDPYGALSTPLYQTATFKQPSAT--ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGT 92 (265)
Q Consensus 16 ~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~~~~ 92 (265)
|+ +|||+|+.++|.+........... ......|+.. +...++++++++++|.+..+++++|++++. ++..+.++
T Consensus 9 ~~-~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~y~~~--~~~~~l~~~la~~~~~~~~i~~~~G~~a~~~al~~~~~~ 85 (357)
T 3lws_A 9 FQ-QTTGQISGHGKRNVGVLKTAFAAVADEMASDQYGTG--AIIEPFEQKFADVLGMDDAVFFPSGTMAQQVALRIWSDE 85 (357)
T ss_dssp HH-TCSEESSBSSCCBHHHHHHHHTTSCTTCBCEETTEE--TTHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHH
T ss_pred HH-hhcccccCCCCCCHHHHHHHHHHhhcccCcccccCC--hHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHHhhc
Confidence 66 899999999998875432221111 1122334432 568899999999999998888899998875 67777888
Q ss_pred CC--EEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC----CHHHHHhhcCCCceEEEEecCCCCc-ccccc---HHHHH
Q 024619 93 GE--EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPWTKLVWVESPTNPR-QQICD---IRKIA 162 (265)
Q Consensus 93 g~--~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----d~~~l~~~~~~~~~~i~~~~~~np~-G~~~~---l~~i~ 162 (265)
|| .|+++.+.|...... .......|++++.++.+ |+++++++. ++++|++++|+||+ |.+.+ +++|+
T Consensus 86 gd~~~vi~~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~ 162 (357)
T 3lws_A 86 TDNRTVAYHPLCHLEIHEQ-DGLKELHPIETILVGAADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETIS 162 (357)
T ss_dssp HTCCEEEECTTCHHHHSST-THHHHHSSCEEEECSCTTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHH
T ss_pred CCCcEEEecccceeeeecc-chhhhccCcEEEEecCCCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHH
Confidence 88 677766655433210 01123358888888753 889998873 48999999999998 88864 89999
Q ss_pred HHHHHcCCEEEEeCCcCC---CCCcC---CCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHH
Q 024619 163 EMAHAHGALLLVDNSIMS---PVLSR---PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 229 (265)
Q Consensus 163 ~~a~~~~~~li~D~~~~~---~~~~~---~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~ 229 (265)
++|++||+++|+|++|.. +..+. ......|+++.|+||++++|.| |+++.+++. .+.......
T Consensus 163 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g---g~~~~~~~~-~~~~~~~~~ 231 (357)
T 3lws_A 163 RYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAG---AILAGPAAF-CQTARIWKR 231 (357)
T ss_dssp HHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSC---EEEEECHHH-HHHHHHHHH
T ss_pred HHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCce---EEEEcCHHH-HHHHHHHHH
Confidence 999999999999999862 11111 1123468889999999977764 888776644 444443433
No 116
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.89 E-value=2.7e-22 Score=175.51 Aligned_cols=197 Identities=16% Similarity=0.089 Sum_probs=137.2
Q ss_pred eeEeeccCCCCCCCC----CCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhC----CCceEE--ecc
Q 024619 11 TLLMNFSNEFDPYGA----LSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDK----ADRALC--FTS 78 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g----~~~~i~--~~~ 78 (265)
..+++|+ .++|+.+ .++|.+....... ......+.|++. |.+ +++++++++....+ .+++++ +++
T Consensus 26 ~~~i~l~-~g~~~~~~~~~~~~~~v~~a~~~~--~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g 102 (396)
T 2q7w_A 26 PGKINLG-IGVYKDETGKTPVLTSVKKAEQYL--LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPG 102 (396)
T ss_dssp --CEESS-CCSCCCTTSCCCCCHHHHHHHHHH--HHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESH
T ss_pred CCceecc-cccccCCCCCccCcHHHHHHHHhh--cCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEeccc
Confidence 4689999 7775433 2233333322111 000123467555 664 47777777755432 445555 666
Q ss_pred hHHHHH-HHHHh--cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC---C----CHHHHHhhcCC---CceEEEE
Q 024619 79 GMAALA-AVTHL--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---C----DLDEVASAIGP---WTKLVWV 145 (265)
Q Consensus 79 g~~al~-~~~~~--~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~----d~~~l~~~~~~---~~~~i~~ 145 (265)
|++|+. ++..+ +.+||+|+++.|+|+++.. .++..|.+++.++. + |++++++++.+ +++++++
T Consensus 103 ~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~ 178 (396)
T 2q7w_A 103 GTGALRVAADFLAKNTSVKRVWVSNPSWPNHKS----VFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFH 178 (396)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHH----HHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEE
T ss_pred chhhHHHHHHHHHHhCCCCEEEEcCCCchhHHH----HHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEe
Confidence 678986 44333 5799999999999999874 44557889888887 3 79999998864 4778889
Q ss_pred ecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc------CC--C--CCCccEEEeccccccccCCCceeeE
Q 024619 146 ESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS------RP--L--ELGADIVMHSATKFIAGHSDVMAGV 212 (265)
Q Consensus 146 ~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~------~~--~--~~~~di~~~s~sK~~~g~~g~~~G~ 212 (265)
++|+||||.+.+ +++|+++|+++|+++|+||+|+..... .. . ..+.++++.|+||++ |++|+|+|+
T Consensus 179 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~riG~ 257 (396)
T 2q7w_A 179 GCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNF-GLYNERVGA 257 (396)
T ss_dssp CSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTT-TCGGGCCEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccc-cccccccce
Confidence 999999999965 678999999999999999999864432 01 1 124579999999999 778899999
Q ss_pred EEe
Q 024619 213 LAV 215 (265)
Q Consensus 213 v~~ 215 (265)
+++
T Consensus 258 ~~~ 260 (396)
T 2q7w_A 258 CTL 260 (396)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
No 117
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.89 E-value=7.6e-22 Score=173.61 Aligned_cols=165 Identities=16% Similarity=0.109 Sum_probs=127.5
Q ss_pred CCCccCCC-CCh-hHHHHHHHHHhHhCC----Cc-eEEecc-hHHHHH-HHHHhcC--CCCEEEEcCCCCCChHHHHHhh
Q 024619 45 GPYDYTRS-GNP-TRDALESLLAKLDKA----DR-ALCFTS-GMAALA-AVTHLLG--TGEEIVAGDDLYGGTDRLLSRV 113 (265)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~-~i~~~~-g~~al~-~~~~~~~--~g~~viv~~~~~~~~~~~~~~~ 113 (265)
..+.|++. |.+ +++++.+++.+..+. +. .++++. |++|+. ++..+.+ + |+|++++|+|+.+. ..
T Consensus 64 ~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~----~~ 138 (405)
T 3k7y_A 64 KEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHV----NM 138 (405)
T ss_dssp CCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHH----HH
T ss_pred CCCCCCCCCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHH----HH
Confidence 46789887 987 599999999766543 22 244454 458886 5566666 8 99999999999997 55
Q ss_pred cCCCCeEEEeecCC-------CHHHHHhhcC--CCceEEEEecC-CCCcccccc---HHHHHHHHHHcCCEEEEeCCcCC
Q 024619 114 TPKTGVVVKRVNTC-------DLDEVASAIG--PWTKLVWVESP-TNPRQQICD---IRKIAEMAHAHGALLLVDNSIMS 180 (265)
Q Consensus 114 ~~~~g~~~~~~~~~-------d~~~l~~~~~--~~~~~i~~~~~-~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~ 180 (265)
++..|.+++.+++. |++++++++. ++++++++++| |||||.+.+ +++|+++|++||+++|+||+|..
T Consensus 139 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~ 218 (405)
T 3k7y_A 139 IESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQG 218 (405)
T ss_dssp HHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTT
T ss_pred HHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCccc
Confidence 57889999998761 7899998885 35678888665 899999965 68899999999999999999975
Q ss_pred CCCcC------C-----CCCCccEEEeccccccccCCCceeeEEEe
Q 024619 181 PVLSR------P-----LELGADIVMHSATKFIAGHSDVMAGVLAV 215 (265)
Q Consensus 181 ~~~~~------~-----~~~~~di~~~s~sK~~~g~~g~~~G~v~~ 215 (265)
-.+.. + ...+..+++.||||.| +.+|+|.|++++
T Consensus 219 l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~l~GlRiG~~~~ 263 (405)
T 3k7y_A 219 FGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNM-SLYGERAGALHI 263 (405)
T ss_dssp TSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTS-CCTTTTEEEEEE
T ss_pred ccCCCcccchHHHHHHHhcCCcEEEEeeCCccC-CCccccceEEEE
Confidence 43321 0 1124679999999999 778999999864
No 118
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.89 E-value=9.8e-23 Score=175.61 Aligned_cols=215 Identities=15% Similarity=0.167 Sum_probs=142.8
Q ss_pred ceeEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCC-ceEEe-cchHHHHHHHH
Q 024619 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCF-TSGMAALAAVT 87 (265)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~-~~i~~-~~g~~al~~~~ 87 (265)
+..+++|+...++++ ++|.+....... . .....|+.. ...++++.+++++|.+ +.+++ ++|++++.++.
T Consensus 14 g~~~id~~~~~~~~~--~~~~v~~a~~~~--~--~~~~~y~~~---~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~ 84 (350)
T 3fkd_A 14 SSEIVNFSTTVWTDG--DKDHLEKHLVEN--L--NCIRHYPEP---DAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIA 84 (350)
T ss_dssp --CCEECSCCSCCCS--CCHHHHHHHHHT--G--GGGGSCCCT---TCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHH
T ss_pred cccEEEccCCCCCCC--CCHHHHHHHHHh--H--hHHhcCCCC---cHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHH
Confidence 367999993334455 334333322111 1 123445443 2257888999999876 44444 55568987544
Q ss_pred HhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC-CCHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHH
Q 024619 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH 166 (265)
Q Consensus 88 ~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~ 166 (265)
..+. ||+|+++.|+|+.+. ..++..|.+++.++. ++.+.+.. +++++|++++|+||||.+.+++++.++++
T Consensus 85 ~~l~-gd~Vi~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~l~~ 156 (350)
T 3fkd_A 85 QAFR-GSRSLIAIPSFAEYE----DACRMYEHEVCFYPSNEDIGEADF---SNMDFCWLCNPNNPDGRLLQRTEILRLLN 156 (350)
T ss_dssp HHTT-TCEEEEEESCCHHHH----HHHHHTTCEEEEEETTSCGGGSCC---TTCSEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred HHHC-CCEEEEeCCCcHHHH----HHHHHcCCeEEEEecCCccccCcc---CCCCEEEEeCCCCCcCCCCCHHHHHHHHH
Confidence 4433 999999999999887 444667999999998 55444322 67999999999999999999999999998
Q ss_pred HcC-CEEEEeCCcCCCCCcC------CCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhH
Q 024619 167 AHG-ALLLVDNSIMSPVLSR------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 239 (265)
Q Consensus 167 ~~~-~~li~D~~~~~~~~~~------~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (265)
.++ .++|+||+|+...... ....+.++++.|+||++ +.+|+++|+++.+++ +.+.+.... .....++..
T Consensus 157 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~~~~~~~-~~~~~~~~~--~~~~~~~~~ 232 (350)
T 3fkd_A 157 DHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAY-GIPGLRIGYIVANKD-FMKRVAAFS--TPWAVNALA 232 (350)
T ss_dssp HCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHH-SCGGGCCEEEECCHH-HHHHHHTTC--CTTCSCHHH
T ss_pred hCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhc-cCcchheEeEEeCHH-HHHHHHHhC--CCCCCCHHH
Confidence 876 7999999997544321 11335679999999999 667899999998554 434332221 223455555
Q ss_pred HHHHHh
Q 024619 240 CWICLR 245 (265)
Q Consensus 240 ~~~~~~ 245 (265)
++.+.+
T Consensus 233 ~~~~~~ 238 (350)
T 3fkd_A 233 IEAAKF 238 (350)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444333
No 119
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.88 E-value=1.3e-22 Score=177.54 Aligned_cols=158 Identities=18% Similarity=0.135 Sum_probs=131.5
Q ss_pred hhHHHHHHHHHhHhCCC--ceEEecchHHHHH-HHHHhc----CCCC-EEEEcCCCCCChHHHHHhhcCCCCeEEEeecC
Q 024619 55 PTRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL----GTGE-EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~~i~~~~g~~al~-~~~~~~----~~g~-~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 126 (265)
+..+++++++++++|.+ .++++++|++|+. ++..++ ++|| +|+++.++|+++...+... +..|.+++.++.
T Consensus 63 ~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~-~~~g~~~~~v~~ 141 (400)
T 3vax_A 63 RGVERAREYLASTVSAEPDELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHL-AGRGFEVDFLTP 141 (400)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHH-HTTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHH-HhcCCeEEEEcc
Confidence 45889999999999987 4555556679986 566666 8999 9999999999988776443 567999999987
Q ss_pred C-----CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcC-CCCCCccEEEecccc
Q 024619 127 C-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATK 200 (265)
Q Consensus 127 ~-----d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~-~~~~~~di~~~s~sK 200 (265)
+ |++++++++.+++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+.... .... .|++++|++|
T Consensus 142 ~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~-~d~~~~s~~K 220 (400)
T 3vax_A 142 GPSGRISVEGVMERLRPDTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP-IDMISISGHK 220 (400)
T ss_dssp CTTCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC-CSEEEEETGG
T ss_pred CCCCCcCHHHHHHhcCCCceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc-CcEEEEeHHH
Confidence 5 8999999999999999999999999999999999999999999999999999776542 2233 8999999999
Q ss_pred ccccCCCceeeEEE-eec
Q 024619 201 FIAGHSDVMAGVLA-VKG 217 (265)
Q Consensus 201 ~~~g~~g~~~G~v~-~~~ 217 (265)
++ |+.|+ |+++ +++
T Consensus 221 ~~-g~~g~--g~~~~~~~ 235 (400)
T 3vax_A 221 IG-APKGV--GALVTRRR 235 (400)
T ss_dssp GT-SCSSC--EEEEECBC
T ss_pred hC-CCCce--EEEEEecc
Confidence 65 67664 7776 666
No 120
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.88 E-value=2e-22 Score=177.02 Aligned_cols=162 Identities=12% Similarity=0.141 Sum_probs=133.8
Q ss_pred hhHHHHHHHHHhHhCCCc--eEEe-cchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC---
Q 024619 55 PTRDALESLLAKLDKADR--ALCF-TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~--~i~~-~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--- 127 (265)
...+++++++++++|.+. .+++ ++|++++. ++..++++||+|+++.|+|++.. +...++..|.+++.++.+
T Consensus 46 ~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 123 (411)
T 3nnk_A 46 HYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHL--LCEIARRCRAEVHTIEVPWGE 123 (411)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHH--HHHHHHHcCCeEEEEecCCCC
Confidence 457899999999998773 2444 45678886 77778999999999999997621 125556778999998866
Q ss_pred --CHHHHHhhcCC-CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc-CCCCCCccEEEeccccccc
Q 024619 128 --DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (265)
Q Consensus 128 --d~~~l~~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~s~sK~~~ 203 (265)
|++++++++.+ ++++|++++++||||.+.|+++|.++|++||+++|+|++|+.+... .....+.|+++.|++|++.
T Consensus 124 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~ 203 (411)
T 3nnk_A 124 VFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLG 203 (411)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTC
T ss_pred CCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccC
Confidence 89999999975 8999999999999999999999999999999999999999877654 3345578999999999977
Q ss_pred cCCCceeeEEEeechhH
Q 024619 204 GHSDVMAGVLAVKGERL 220 (265)
Q Consensus 204 g~~g~~~G~v~~~~~~~ 220 (265)
++.| .|+++.+++.+
T Consensus 204 ~~~g--~g~~~~~~~~~ 218 (411)
T 3nnk_A 204 GPSG--TSPITLSARME 218 (411)
T ss_dssp CCSS--EEEEEECHHHH
T ss_pred CCCc--eEEEEECHHHH
Confidence 8776 58888877544
No 121
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.88 E-value=2.8e-22 Score=175.90 Aligned_cols=227 Identities=16% Similarity=0.137 Sum_probs=154.1
Q ss_pred ceeEeeccCCC---CCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCCceEEecchHHHHH-H
Q 024619 10 STLLMNFSNEF---DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-A 85 (265)
Q Consensus 10 ~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~ 85 (265)
+.++++|+ ++ +++|..+|.+..+..-.... ..+.+.....+..+++++++++++|.+.++++++|++|+. +
T Consensus 38 g~~~lD~~-~~~~~~~lg~~~p~v~~a~~~~~~~----~~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~~a~~~a 112 (406)
T 4adb_A 38 GKEYIDFA-GGIAVNALGHAHPELREALNEQASK----FWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAA 112 (406)
T ss_dssp CCEEEESS-HHHHTCTTCBTCHHHHHHHHHHHTT----CSCCCTTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHH
T ss_pred CCEEEECC-CchhhcccCCCCHHHHHHHHHHHHh----cccccCCcCCHHHHHHHHHHHhhCCCCeEEEeCcHHHHHHHH
Confidence 45689998 55 88998554444443221211 1111122245679999999999999998888888899986 5
Q ss_pred HHHhcC-------CC-CEEEEcCCCCCChHHHHHhhcC---------CCCeEEEeecCCCHHHHHhhcCCCceEEEEecC
Q 024619 86 VTHLLG-------TG-EEIVAGDDLYGGTDRLLSRVTP---------KTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (265)
Q Consensus 86 ~~~~~~-------~g-~~viv~~~~~~~~~~~~~~~~~---------~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~ 148 (265)
+..+.. +| |+|++.+|.|+.+......... ..+..+..++.+|++++++++.+++++|+++ |
T Consensus 113 l~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~-p 191 (406)
T 4adb_A 113 LKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALIDDSTCAVIVE-P 191 (406)
T ss_dssp HHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHHHHHTTCSTTEEEEEEC-S
T ss_pred HHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHHHHHHHhcCCeEEEEEe-C
Confidence 555543 55 9999999999988544322221 1224566777889999999999899999999 8
Q ss_pred CCCccccc-----cHHHHHHHHHHcCCEEEEeCCcC-CCCCcCC-----CCCCccEEEeccccccccCCCceeeEEEeec
Q 024619 149 TNPRQQIC-----DIRKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKG 217 (265)
Q Consensus 149 ~np~G~~~-----~l~~i~~~a~~~~~~li~D~~~~-~~~~~~~-----~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~ 217 (265)
+||+|.+. ++++|.++|++||+++|+||+|+ .+..+.+ .....|++ |+||+++ +|+++|+++.++
T Consensus 192 ~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~--~G~r~G~~~~~~ 267 (406)
T 4adb_A 192 IQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL--TTAKALG--GGFPVGALLATE 267 (406)
T ss_dssp EETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG--TTSCCEEEEECH
T ss_pred CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE--Eechhhc--CCCCeEEEEEcH
Confidence 99999764 68999999999999999999996 2222211 12345666 6799995 578999998876
Q ss_pred hhHHHHHHHHHHhccCCCChhHHHHHHhcc
Q 024619 218 ERLAKELYFLQNAEGSGLAPFDCWICLRGV 247 (265)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 247 (265)
+.+ +.+...........++..+..+...+
T Consensus 268 ~~~-~~~~~~~~~~~~~~~~~~~~a~~~~l 296 (406)
T 4adb_A 268 ECA-RVMTVGTHGTTYGGNPLASAVAGKVL 296 (406)
T ss_dssp HHH-HTCCTTSSCCSSTTCHHHHHHHHHHH
T ss_pred HHH-hhhccCCcCCCCCCCHHHHHHHHHHH
Confidence 543 32222222233445555555544433
No 122
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.88 E-value=1.1e-21 Score=171.51 Aligned_cols=165 Identities=22% Similarity=0.298 Sum_probs=134.1
Q ss_pred ChhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHh-cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC----
Q 024619 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (265)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~-~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (265)
.+...++++.+++++|.++.+++++|++|+. ++..+ +++||+|+++.|+|+++...+ +..|.+++.++.+
T Consensus 55 ~~~~~~l~~~la~~~~~~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~ 130 (391)
T 3dr4_A 55 GRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSV----TYCGATPVLVDNDPRTF 130 (391)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHHHH----HHTTCEEEEECBCTTTC
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHHHHHHH----HHCCCEEEEEecCcccc
Confidence 3678999999999999999999999999986 67777 899999999999999997443 5678899988865
Q ss_pred --CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCC--CCCccEEEeccc--cc
Q 024619 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL--ELGADIVMHSAT--KF 201 (265)
Q Consensus 128 --d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~--~~~~di~~~s~s--K~ 201 (265)
|++++++++.+++++|+ ++||||.+.|+++|.++|+++|+++|+|++|+.|...... ..-.|+.+.|++ |+
T Consensus 131 ~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~ 207 (391)
T 3dr4_A 131 NLDAAKLEALITPRTKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAI 207 (391)
T ss_dssp SBCGGGSGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTTSS
T ss_pred CcCHHHHHHhcCCCceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCCCCc
Confidence 78999999988899888 5689999999999999999999999999999987653222 112377777855 99
Q ss_pred cccCCCceeeEEEeechhHHHHHHHHH
Q 024619 202 IAGHSDVMAGVLAVKGERLAKELYFLQ 228 (265)
Q Consensus 202 ~~g~~g~~~G~v~~~~~~~~~~~~~~~ 228 (265)
++++ ++|+++.+++.+.+......
T Consensus 208 l~~g---~gg~~~~~~~~~~~~~~~~~ 231 (391)
T 3dr4_A 208 ITTG---EGGMITTNDDDLAAKMRLLR 231 (391)
T ss_dssp SCCB---SCEEEEESCHHHHHHHHHHH
T ss_pred CCcC---CeEEEEECCHHHHHHHHHHH
Confidence 9542 37888888776666555444
No 123
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.88 E-value=2.3e-22 Score=175.70 Aligned_cols=162 Identities=16% Similarity=0.260 Sum_probs=132.4
Q ss_pred hhHHHHHHHHHhHhCCCc--eEEe-cchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC----
Q 024619 55 PTRDALESLLAKLDKADR--ALCF-TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---- 126 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~--~i~~-~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~---- 126 (265)
+..+++++++++++|.+. .+++ ++|++|+. ++..++++||+|++++|+|+++. +...++..|.+++.++.
T Consensus 52 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 129 (393)
T 2huf_A 52 KIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDR--SADMATRYGADVRVVKSKVGQ 129 (393)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEEEEECCCcchHH--HHHHHHHcCCeeEEEeCCCCC
Confidence 458899999999999863 4555 55669986 66777899999999999998753 22444567889888885
Q ss_pred -CCHHHHHhhcCC-CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcC-CCCCCccEEEeccccccc
Q 024619 127 -CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATKFIA 203 (265)
Q Consensus 127 -~d~~~l~~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~-~~~~~~di~~~s~sK~~~ 203 (265)
.|++++++++.+ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+.... ....+.|++++|+||+++
T Consensus 130 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~sK~l~ 209 (393)
T 2huf_A 130 SLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQKVLG 209 (393)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECCSSSTTC
T ss_pred CCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcCccEEEECCCcccc
Confidence 489999999877 89999999999999999999999999999999999999998765432 224478999999999987
Q ss_pred cCCCceeeEEEeechhH
Q 024619 204 GHSDVMAGVLAVKGERL 220 (265)
Q Consensus 204 g~~g~~~G~v~~~~~~~ 220 (265)
|++|+ |+++++++.+
T Consensus 210 g~~G~--G~~~~~~~~~ 224 (393)
T 2huf_A 210 APPGI--TPVSFSHRAV 224 (393)
T ss_dssp CCSSC--EEEEECHHHH
T ss_pred cCCCe--EEEEECHHHH
Confidence 88886 8888876443
No 124
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.88 E-value=2.1e-22 Score=176.76 Aligned_cols=199 Identities=17% Similarity=0.190 Sum_probs=129.3
Q ss_pred eeEeeccCCCCCCCCCCCCeeeccccc-cCCCC-CCCCCccCCC-CChhHHHHHHHHHhH--hC-CC-ceEEec-chHHH
Q 024619 11 TLLMNFSNEFDPYGALSTPLYQTATFK-QPSAT-ENGPYDYTRS-GNPTRDALESLLAKL--DK-AD-RALCFT-SGMAA 82 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~-~~~~~~y~~~-g~~~~~~l~~~l~~~--~g-~~-~~i~~~-~g~~a 82 (265)
..+++|+ .+++. ..++|.+...... ..... ....+.|++. |. .++++.++++ +| .+ +.++++ +++++
T Consensus 33 ~~~i~l~-~~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~---~~lr~~la~~l~~g~~~~~~v~~~~G~~~a 107 (400)
T 3asa_A 33 HTVINLS-IGDTT-QPLNASVAEAFASSIARLSSPTTCRGYGPDFGL---PALRQKLSEDFYRGFVDAKEIFISDGAKVD 107 (400)
T ss_dssp SCCEECS-SCCCC-CCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCC---HHHHHHHHHTTSTTSSCGGGEEEESCHHHH
T ss_pred CceEecc-CCCCC-CCCCHHHHHHHHHHHhcccccccccCCCCCCCC---HHHHHHHHHHHHcCCCCHHHEEEccChHHH
Confidence 4678998 55542 2233333322111 11100 1123456654 44 3455555555 46 33 444445 44588
Q ss_pred HHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeE-EEeecCCCHHHHHhhcC--CCceEEEEecCCCCcccccc--
Q 024619 83 LAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV-VKRVNTCDLDEVASAIG--PWTKLVWVESPTNPRQQICD-- 157 (265)
Q Consensus 83 l~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~d~~~l~~~~~--~~~~~i~~~~~~np~G~~~~-- 157 (265)
+.++..++++||+|++++|+|+++... ++..|.+ ++.++.++.+.+...+. +++++|++++|+||||.+.+
T Consensus 108 l~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~nptG~~~~~~ 183 (400)
T 3asa_A 108 LFRLLSFFGPNQTVAIQDPSYPAYLDI----ARLTGAKEIIALPCLQENAFFPEFPEDTHIDILCLCSPNNPTGTVLNKD 183 (400)
T ss_dssp HHHHHHHHCSSCEEEEEESCCHHHHHH----HHHTTCSEEEEEECCGGGTTCCCCCTTCCCSEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHHcCCCCEEEECCCCcHHHHHH----HHHcCCcceEecccchhcCcccChhhccCccEEEEeCCCCCCCCcCCHH
Confidence 876667788999999999999988743 3446776 77777642212211121 57899999999999999976
Q ss_pred -HHHHHHHHHHcCCEEEEeCCcCCCCCc-----CCCC----CCccEEEeccccccccCCCceeeEEEeechh
Q 024619 158 -IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGER 219 (265)
Q Consensus 158 -l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~~~----~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~ 219 (265)
+++|+++|+++|+++|+||+|+..... .... .+.++++.|+||++ |++|+|+|+++++++.
T Consensus 184 ~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~GlriG~~~~~~~~ 254 (400)
T 3asa_A 184 QLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPL-GFAGIRLGWTVIPQEL 254 (400)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGG-TTTTCCCEEEECCTTC
T ss_pred HHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhc-CCcchheeEEeeChhh
Confidence 678999999999999999999832211 1112 23469999999999 6678999999988765
No 125
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.88 E-value=3.6e-22 Score=174.86 Aligned_cols=231 Identities=14% Similarity=0.082 Sum_probs=157.9
Q ss_pred ceeEeeccCC--CCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCCceEEecchHHHHH-HH
Q 024619 10 STLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (265)
Q Consensus 10 ~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~ 86 (265)
+.++++|++. ..++|..+|.+..+..-.... ..+.|.....+..+++++++++++|.+.++++++|++|+. ++
T Consensus 35 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~----~~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~ea~~~al 110 (395)
T 3nx3_A 35 AKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDK----LLHTSNLYYNENIAAAAKNLAKASALERVFFTNSGTESIEGAM 110 (395)
T ss_dssp CCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTT----CSCCCTTSBCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHH
T ss_pred CCEEEECCCcHHhccCCCCCHHHHHHHHHHHHh----ccccccccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHH
Confidence 4578999833 367888665555554322221 2233333345789999999999999888888889999986 44
Q ss_pred HHhc-------CCCCEEEEcCCCCCChHHHHHh---------hcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCC
Q 024619 87 THLL-------GTGEEIVAGDDLYGGTDRLLSR---------VTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (265)
Q Consensus 87 ~~~~-------~~g~~viv~~~~~~~~~~~~~~---------~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~n 150 (265)
..+. .++++|++.+|.|+++...... .....+.++..++.+|++++++++.+++++|++++++|
T Consensus 111 ~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~ 190 (395)
T 3nx3_A 111 KTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISSVEKLVNEKTCAIILESVQG 190 (395)
T ss_dssp HHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTTCHHHHHTTCCTTEEEEEEESEEC
T ss_pred HHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCCCHHHHHHhccCCeEEEEEeCccC
Confidence 4443 4579999999999877532211 12233456777888899999999998899999999999
Q ss_pred Ccccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcC-----CCCCCccEEEeccccccccCCCceeeEEEeechhH
Q 024619 151 PRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 151 p~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~-----~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
++|.+.+ +++|.++|++||+++|+||+|. .+..+. ......|++ |+||.+++ |+++|+++++++.+
T Consensus 191 ~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~--G~~~G~~~~~~~~~ 266 (395)
T 3nx3_A 191 EGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIM--TSAKALGC--GLSVGAFVINQKVA 266 (395)
T ss_dssp TTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGTT--TSCCEEEEECHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEE--EecccccC--CCceEEEEEchhhh
Confidence 9999876 9999999999999999999987 332221 112234555 67899953 68899998877652
Q ss_pred HHHHHHHHHhccCCCChhHHHHHHhccC
Q 024619 221 AKELYFLQNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (265)
.+.+...........++..++.....++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~aa~aal~ 294 (395)
T 3nx3_A 267 SNSLEAGDHGSTYGGNPLVCAGVNAVFE 294 (395)
T ss_dssp HHHSCTTCCSSCBSCCHHHHHHHHHHHH
T ss_pred hhhcCCcccCCCCCCCHHHHHHHHHHHH
Confidence 3333222222334455655555444443
No 126
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.88 E-value=2.1e-22 Score=176.02 Aligned_cols=161 Identities=17% Similarity=0.275 Sum_probs=131.1
Q ss_pred hHHHHHHHHHhHhCCC-c-eEEec-chHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC-----
Q 024619 56 TRDALESLLAKLDKAD-R-ALCFT-SGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----- 126 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~-~-~i~~~-~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~----- 126 (265)
..+++++.+++++|.+ + .++++ +|++++. ++..++++||+|++++|+|+++. +...++..|.+++.++.
T Consensus 52 ~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~ 129 (396)
T 2ch1_A 52 TMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAER--AVEMSERYGADVRTIEGPPDRP 129 (396)
T ss_dssp HHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTSC
T ss_pred HHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHH--HHHHHHHcCCceEEecCCCCCC
Confidence 4789999999999987 3 45555 5568886 67777899999999999998873 22345667889988884
Q ss_pred CCHHHHHhhcCC-CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc-CCCCCCccEEEecccccccc
Q 024619 127 CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAG 204 (265)
Q Consensus 127 ~d~~~l~~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~s~sK~~~g 204 (265)
.|++++++++.+ ++++|++++|+||||.+.|+++|.++|+++|+++|+||+|+.+... .....+.|+++.|++|++++
T Consensus 130 ~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~ 209 (396)
T 2ch1_A 130 FSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGA 209 (396)
T ss_dssp CCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCC
T ss_pred CCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEcCCccccC
Confidence 489999999876 8999999999999999999999999999999999999999976543 22344679999999999988
Q ss_pred CCCceeeEEEeechhH
Q 024619 205 HSDVMAGVLAVKGERL 220 (265)
Q Consensus 205 ~~g~~~G~v~~~~~~~ 220 (265)
++|+ |+++.+++.+
T Consensus 210 ~~g~--g~~~~~~~~~ 223 (396)
T 2ch1_A 210 PPGI--TPISISPKAL 223 (396)
T ss_dssp CSSC--EEEEECHHHH
T ss_pred CCCe--EEEEECHHHH
Confidence 8875 8888877543
No 127
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.88 E-value=2.5e-22 Score=175.99 Aligned_cols=193 Identities=16% Similarity=0.203 Sum_probs=136.9
Q ss_pred CccCCCCChhHHHHHHHHHhHhCCC-ceEEecch-HHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEe
Q 024619 47 YDYTRSGNPTRDALESLLAKLDKAD-RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKR 123 (265)
Q Consensus 47 ~~y~~~g~~~~~~l~~~l~~~~g~~-~~i~~~~g-~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (265)
..|++. ....++++.+++++|.+ +.+++++| ++++. ++..++++||+|+++.|+|+++.. .++..|.+++.
T Consensus 68 ~~y~~~--~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~ 141 (397)
T 2zyj_A 68 LQYSPT--EGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQ----AFRLQGPRFLT 141 (397)
T ss_dssp TSCCCT--TCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH----HHHTTCCEEEE
T ss_pred hCCCCC--CCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH----HHHHcCCEEEe
Confidence 355544 22455666666666764 44555555 58886 677778999999999999998874 44567888888
Q ss_pred ecCC----CHHHHHhhcCC-CceEE-EEecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc-C----CCCC
Q 024619 124 VNTC----DLDEVASAIGP-WTKLV-WVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-R----PLEL 189 (265)
Q Consensus 124 ~~~~----d~~~l~~~~~~-~~~~i-~~~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~-~----~~~~ 189 (265)
++.+ |++++++++.+ ++++| ++++|+||||.+.+ +++|+++|+++|+++|+||+|+.+.+. . ....
T Consensus 142 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 221 (397)
T 2zyj_A 142 VPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFEL 221 (397)
T ss_dssp EEEETTEECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHH
T ss_pred cCcCCCCCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhh
Confidence 8753 78999988875 78887 57999999999976 459999999999999999999875442 1 1112
Q ss_pred ------CccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHHHhccC
Q 024619 190 ------GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 190 ------~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (265)
+.++++.|+||++ + +|+++|+++++++ +.+.+...........++..+..+.+.++
T Consensus 222 ~~~~~~~~~i~~~s~sK~~-~-~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~ 283 (397)
T 2zyj_A 222 AREAGYPGVIYLGSFSKVL-S-PGLRVAFAVAHPE-ALQKLVQAKQGADLHTPMLNQMLVHELLK 283 (397)
T ss_dssp HHHHTCCCEEEEEESTTTT-C-GGGCCEEEECCHH-HHHHHHHHHHHHHSSCCHHHHHHHHHHHT
T ss_pred CcccCCCeEEEEecccccc-c-ccceeEEEecCHH-HHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence 3459999999999 5 7899999998764 44444443333333445555554444444
No 128
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.88 E-value=1.5e-22 Score=176.40 Aligned_cols=161 Identities=14% Similarity=0.065 Sum_probs=130.0
Q ss_pred hHHHHHHHHHhHhCCC--ceEEecchHHHHH-HHHHhcCC-------------CCEEEEcCCCCCChHHHHHhhcCCCCe
Q 024619 56 TRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLLGT-------------GEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~g~~al~-~~~~~~~~-------------g~~viv~~~~~~~~~~~~~~~~~~~g~ 119 (265)
..+++++++++++|.+ +++++++|++|+. ++..+..+ ||+|+++.|+|+++... ++..|.
T Consensus 70 ~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~ 145 (397)
T 3f9t_A 70 LEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKG----REMMDL 145 (397)
T ss_dssp HHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHH----HHHHTC
T ss_pred HHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHH----HHHcCc
Confidence 4788999999999876 3467777778885 66666554 99999999999998744 455688
Q ss_pred EEEeecCC-----CHHHHHhhcCC-CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcC--------
Q 024619 120 VVKRVNTC-----DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-------- 185 (265)
Q Consensus 120 ~~~~~~~~-----d~~~l~~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~-------- 185 (265)
+++.++.+ |++++++++.+ ++++|++++|+||||.+.|+++|.++|++||+++|+||+|+.+.++.
T Consensus 146 ~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~ 225 (397)
T 3f9t_A 146 EYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKK 225 (397)
T ss_dssp EEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCT
T ss_pred eeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccc
Confidence 99999876 89999999987 89999999999999999999999999999999999999998544310
Q ss_pred ----CCCC--CccEEEeccccccccCCCceeeEEEeechhHHH
Q 024619 186 ----PLEL--GADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 222 (265)
Q Consensus 186 ----~~~~--~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~ 222 (265)
+... +.|+++.|++|+++++. ++|+++.+++.+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~s~~K~~~~~~--~~g~~~~~~~~~~~ 266 (397)
T 3f9t_A 226 GVNYKFDFSLGVDSITIDPHKMGHCPI--PSGGILFKDIGYKR 266 (397)
T ss_dssp TCCCCCSGGGTCSEEECCTTTTTCCCS--SCEEEEESSGGGGG
T ss_pred cccccccccccCCeEEEccccccCCCC--CceEEEEeCHHHHH
Confidence 1111 78999999999986554 46888777765543
No 129
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.88 E-value=3.7e-22 Score=176.50 Aligned_cols=194 Identities=16% Similarity=0.080 Sum_probs=134.9
Q ss_pred CCccCCC-CChhHHHHHHHHHhHhCCC-ceEEecch-HHHH--HHH-HHhcCC------------CCEEEEcCCCCCChH
Q 024619 46 PYDYTRS-GNPTRDALESLLAKLDKAD-RALCFTSG-MAAL--AAV-THLLGT------------GEEIVAGDDLYGGTD 107 (265)
Q Consensus 46 ~~~y~~~-g~~~~~~l~~~l~~~~g~~-~~i~~~~g-~~al--~~~-~~~~~~------------g~~viv~~~~~~~~~ 107 (265)
.+.|++. |.+ ++++.++++++.+ +.+++++| ++++ .++ ..+..+ +|+|++++|+|+.+.
T Consensus 69 ~~~Y~~~~G~~---~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~ 145 (422)
T 3d6k_A 69 CRNYGGLLGIA---DIRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHF 145 (422)
T ss_dssp TTSSCCSSCCH---HHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHH
T ss_pred hhCCCCCCCCH---HHHHHHHHHhCCChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHH
Confidence 4567766 554 3444555555665 45666665 5776 443 445555 347999999999987
Q ss_pred HHHHhhcCCCCeEEEeecC----CCHHHHHhhcCC-CceEEE-EecCCCCccccccHH---HHHHHHH-HcCCEEEEeCC
Q 024619 108 RLLSRVTPKTGVVVKRVNT----CDLDEVASAIGP-WTKLVW-VESPTNPRQQICDIR---KIAEMAH-AHGALLLVDNS 177 (265)
Q Consensus 108 ~~~~~~~~~~g~~~~~~~~----~d~~~l~~~~~~-~~~~i~-~~~~~np~G~~~~l~---~i~~~a~-~~~~~li~D~~ 177 (265)
. .++..|.+++.++. .|++++++++.+ ++++|+ +++|+||||.+.+.+ +|+++|+ ++|+++|+||+
T Consensus 146 ~----~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~ 221 (422)
T 3d6k_A 146 T----ITEHFGFEMINVPMTDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNA 221 (422)
T ss_dssp H----HHHHHTCEEEEEEEETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECT
T ss_pred H----HHHHcCCEEEecCCCCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECC
Confidence 4 44556888888876 379999998875 789888 689999999998765 8888888 99999999999
Q ss_pred cCCCCC-c------CC-------CCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHH
Q 024619 178 IMSPVL-S------RP-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 243 (265)
Q Consensus 178 ~~~~~~-~------~~-------~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (265)
|+...+ . .. ...+.++++.|+||+ ++ +|+|+|+++++++. .+.+...........+...+..+
T Consensus 222 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~-~GlriG~~~~~~~l-~~~l~~~~~~~~~~~~~~~q~a~ 298 (422)
T 3d6k_A 222 YALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-TH-AGSGVSFFASSKEN-IEWYASHANVRGIGPNKLNQLAH 298 (422)
T ss_dssp TTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SC-TTSSCEEEECCHHH-HHHHHHHHHHHCSCCCHHHHHHH
T ss_pred ccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cC-cccceEEEEeCHHH-HHHHHHHHHhhcCCCCHHHHHHH
Confidence 974211 1 11 134678999999998 35 48999999987654 44455555544555666655555
Q ss_pred HhccCc
Q 024619 244 LRGVKT 249 (265)
Q Consensus 244 ~~~l~~ 249 (265)
...++.
T Consensus 299 ~~~l~~ 304 (422)
T 3d6k_A 299 AQFFGD 304 (422)
T ss_dssp HHHHCS
T ss_pred HHHHhC
Confidence 444443
No 130
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.80 E-value=2.1e-24 Score=188.99 Aligned_cols=206 Identities=16% Similarity=0.166 Sum_probs=146.8
Q ss_pred eEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhC--C--CceEEecchHHHHH-HH
Q 024619 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--A--DRALCFTSGMAALA-AV 86 (265)
Q Consensus 12 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g--~--~~~i~~~~g~~al~-~~ 86 (265)
.+++|+ .+++ +..++|.+..+... . .....+.|+..-..+++++++++.+.+| . +.++++++|++++. ++
T Consensus 32 ~~i~l~-~~~~-~~~~~~~v~~a~~~--~-~~~~~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~ 106 (392)
T 3b1d_A 32 QLLPAW-IADM-DFEVMPEVKQAIHD--Y-AEQLVYGYTYASDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAI 106 (392)
Confidence 688898 5665 33344444443211 1 1123455655422357788888877766 2 34455555568886 66
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC--------CCHHHHHhhcC-CCceEEEEecCCCCcccccc
Q 024619 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIG-PWTKLVWVESPTNPRQQICD 157 (265)
Q Consensus 87 ~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~d~~~l~~~~~-~~~~~i~~~~~~np~G~~~~ 157 (265)
..++++||+|+++.|+|+++. ..++..|.+++.++. .|++++++.+. +++++|++++|+||||.+.+
T Consensus 107 ~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 182 (392)
T 3b1d_A 107 QAFTKEGEAVLINSPVYPPFA----RSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWE 182 (392)
Confidence 777899999999999999986 455677888888775 36788888887 67899999999999999975
Q ss_pred ---HHHHHHHHHHcCCEEEEeCCcCCCCCc-----CCC---C--CCccEEEeccccccccCCCceeeEEEeechhHHHHH
Q 024619 158 ---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPL---E--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (265)
Q Consensus 158 ---l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~~---~--~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~ 224 (265)
+++|+++|+++|+++|+||+|+...+. ... . .+.++++.|+||++ +.+|+++|+++++++.+.+.+
T Consensus 183 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~ 261 (392)
T 3b1d_A 183 REVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTF-NIAGTKNSYAIIENPTLCAQF 261 (392)
Confidence 899999999999999999999864331 111 1 45679999999999 667799999998765444434
Q ss_pred HHH
Q 024619 225 YFL 227 (265)
Q Consensus 225 ~~~ 227 (265)
...
T Consensus 262 ~~~ 264 (392)
T 3b1d_A 262 KHQ 264 (392)
Confidence 333
No 131
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.88 E-value=5.1e-22 Score=180.70 Aligned_cols=161 Identities=20% Similarity=0.253 Sum_probs=127.4
Q ss_pred CCh-hHHHHHHHHHhHhCC------CceEEec-chHHHHH-HHHH-----hcCCCCEEEEcCCCCCChHHHHHhhcCCCC
Q 024619 53 GNP-TRDALESLLAKLDKA------DRALCFT-SGMAALA-AVTH-----LLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (265)
Q Consensus 53 g~~-~~~~l~~~l~~~~g~------~~~i~~~-~g~~al~-~~~~-----~~~~g~~viv~~~~~~~~~~~~~~~~~~~g 118 (265)
|.+ .++++++++.+.++. ++.++++ +|++++. ++.. ++++||+|++++|+|+++. ..++..|
T Consensus 139 g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~----~~~~~~g 214 (533)
T 3f6t_A 139 CLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYL----RIPELKD 214 (533)
T ss_dssp CCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHH----TSGGGGG
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHH----HHHHHcC
Confidence 665 588899998777333 2345445 4568886 5555 7899999999999999886 5566778
Q ss_pred eEEEeecCC---------CHHHHHhhcCCCceEEEEecCCCCccccccH---HHHHHHHH-HcCCEEEEeCCcCCCCCcC
Q 024619 119 VVVKRVNTC---------DLDEVASAIGPWTKLVWVESPTNPRQQICDI---RKIAEMAH-AHGALLLVDNSIMSPVLSR 185 (265)
Q Consensus 119 ~~~~~~~~~---------d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l---~~i~~~a~-~~~~~li~D~~~~~~~~~~ 185 (265)
.+++.++++ |++++++++.+++++|++++|+||||.+.+. ++|+++|+ ++|+++|+||+|+......
T Consensus 215 ~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~ 294 (533)
T 3f6t_A 215 YELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF 294 (533)
T ss_dssp SEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTC
T ss_pred CeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCc
Confidence 888888753 7999999999999999999999999999775 58888998 5899999999998543321
Q ss_pred ----CCCCCccEEEeccccccccCCCceeeEEEeech
Q 024619 186 ----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (265)
Q Consensus 186 ----~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~ 218 (265)
....+.+++++|+||.+ |++|+|+|+++++++
T Consensus 295 ~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~l~~~~~ 330 (533)
T 3f6t_A 295 KSIYSVVPYNTMLVYSYSKLF-GCTGWRLGVIALNEK 330 (533)
T ss_dssp CCHHHHSGGGEEEEEESHHHH-TCGGGCEEEEEEESS
T ss_pred cCHhhcCCCCEEEEecCcccC-CCcccceEEEEECcH
Confidence 11225679999999999 678999999999886
No 132
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.88 E-value=2.5e-21 Score=170.88 Aligned_cols=169 Identities=20% Similarity=0.210 Sum_probs=135.0
Q ss_pred cCCC-CCh-hHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHh-cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEee
Q 024619 49 YTRS-GNP-TRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 124 (265)
Q Consensus 49 y~~~-g~~-~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~-~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~ 124 (265)
|++. |.+ .++++++.+++++|.++.+++++|++|+. ++..+ +++||+|+++.|+|+++...+ +..|.+++.+
T Consensus 34 ~~~~~g~~~l~~~l~~~la~~~g~~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~ 109 (418)
T 2c81_A 34 SGYWTGEESMERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIATATAV----LNVNALPVFV 109 (418)
T ss_dssp TSBCCSSCCHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH----HHTTCEEEEE
T ss_pred cCcccCCHHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHhHHHHH----HHcCCEEEEE
Confidence 5554 665 59999999999999998999999999986 66777 789999999999999997443 5678899888
Q ss_pred cCC------CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCC-Cc-CCCCCCccEEEe
Q 024619 125 NTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-LS-RPLELGADIVMH 196 (265)
Q Consensus 125 ~~~------d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~-~~-~~~~~~~di~~~ 196 (265)
+.+ |++++++++.+++++|+++ ||+|...++++|.++|+++|+++|+|++|+.+. +. .....-.|+.+.
T Consensus 110 ~~~~~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~ 186 (418)
T 2c81_A 110 DVEADTYCIDPQLIKSAITDKTKAIIPV---HLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAF 186 (418)
T ss_dssp CBCTTTCSBCHHHHGGGCCTTEEEECCB---CCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEE
T ss_pred ecCCCCCCcCHHHHHHhhCCCCeEEEEe---CCcCCcccHHHHHHHHHHCCCEEEEECcccccCccCCEecccccceEEE
Confidence 764 7999999998889988864 589999999999999999999999999999876 32 111112367777
Q ss_pred cc--ccccccCCCceeeEEEeechhHHHHHHHH
Q 024619 197 SA--TKFIAGHSDVMAGVLAVKGERLAKELYFL 227 (265)
Q Consensus 197 s~--sK~~~g~~g~~~G~v~~~~~~~~~~~~~~ 227 (265)
|+ +|++ ++ | ++|+++.+++.+.+.+...
T Consensus 187 s~s~~K~~-~~-g-~~g~~~~~~~~l~~~~~~~ 216 (418)
T 2c81_A 187 SCQQGKVL-TA-G-EGGIIVTKNPRLFELIQQL 216 (418)
T ss_dssp ECCTTSSS-CS-S-SCEEEEESCHHHHHHHHHH
T ss_pred eccCCccc-CC-C-CeEEEEECCHHHHHHHHHH
Confidence 77 9999 45 5 6899988655554444433
No 133
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.88 E-value=1.4e-22 Score=177.30 Aligned_cols=230 Identities=13% Similarity=0.113 Sum_probs=150.6
Q ss_pred ceeEeeccCCC--CCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCCceEEecchHHHHH-HH
Q 024619 10 STLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (265)
Q Consensus 10 ~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~ 86 (265)
+.++++|++.. ..+|..+|.+..+..-.... ..+.+.....+..+++++++++++|.+.++++++|++|+. ++
T Consensus 35 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~----~~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~~gt~a~~~al 110 (392)
T 3ruy_A 35 GNRYMDLLSAYSAVNQGHRHPKIINALIDQANR----VTLTSRAFHSDQLGPWYEKVAKLTNKEMVLPMNTGAEAVETAI 110 (392)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTT----CSCCCTTSEETTHHHHHHHHHHHHTCSEEEEESSHHHHHHHHH
T ss_pred CCEEEEcCCChhhhccCCCCHHHHHHHHHHHHh----ccccccccCCHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHH
Confidence 45788887321 22555444444443222211 1111111233579999999999999888888899999986 55
Q ss_pred HHhcCC----------CCEEEEcCCCCCChHHHHHhhcCCC---------CeEEEeecCCCHHHHHhhcCCCceEEEEec
Q 024619 87 THLLGT----------GEEIVAGDDLYGGTDRLLSRVTPKT---------GVVVKRVNTCDLDEVASAIGPWTKLVWVES 147 (265)
Q Consensus 87 ~~~~~~----------g~~viv~~~~~~~~~~~~~~~~~~~---------g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~ 147 (265)
..+..+ +|+|++..++|++............ ...+..++..|++++++++.+++++|++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 190 (392)
T 3ruy_A 111 KTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGDLEALKAAITPNTAAFILEP 190 (392)
T ss_dssp HHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTTCHHHHHHHCCTTEEEEEECS
T ss_pred HHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcccHHHHHHHhccCeEEEEEeC
Confidence 544432 6799999999987754432221110 113556677799999999998999999999
Q ss_pred CCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcC-----CCCCCccEEEeccccccccCCC-ceeeEEEee
Q 024619 148 PTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSD-VMAGVLAVK 216 (265)
Q Consensus 148 ~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~-----~~~~~~di~~~s~sK~~~g~~g-~~~G~v~~~ 216 (265)
++||||.+.| +++|.++|++||+++|+||+|+ .+..+. ......|++ ++||+++| | +++|+++++
T Consensus 191 ~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--~~SK~l~g--G~~~~G~~~~~ 266 (392)
T 3ruy_A 191 IQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMY--ILGKALGG--GVFPISCAAAN 266 (392)
T ss_dssp SBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT--TTSCCEEEEEC
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEE--EEchhhhC--ChhhhEEEEEC
Confidence 9999999998 9999999999999999999995 222221 112345766 56799854 5 788999887
Q ss_pred chhHHHHHHHHHHhccCCCChhHHHHHHhccC
Q 024619 217 GERLAKELYFLQNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (265)
++.+ +.+...........++..++.+...++
T Consensus 267 ~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~l~ 297 (392)
T 3ruy_A 267 RDIL-GVFEPGSHGSTFGGNPLACAVSIAALE 297 (392)
T ss_dssp HHHH-TTCCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred HHHH-hhhccCCcCCCCCCCHHHHHHHHHHHH
Confidence 6443 322222233334555555555444443
No 134
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.88 E-value=3.6e-22 Score=176.42 Aligned_cols=187 Identities=16% Similarity=0.106 Sum_probs=135.0
Q ss_pred Ccc-CCC-CChhHHHHHHHHHhHhCCC-ceEEecch-HHHHH---HHHHhcC--C---------CCEEEEcCCCCCChHH
Q 024619 47 YDY-TRS-GNPTRDALESLLAKLDKAD-RALCFTSG-MAALA---AVTHLLG--T---------GEEIVAGDDLYGGTDR 108 (265)
Q Consensus 47 ~~y-~~~-g~~~~~~l~~~l~~~~g~~-~~i~~~~g-~~al~---~~~~~~~--~---------g~~viv~~~~~~~~~~ 108 (265)
+.| ++. |. .++++.++++++.+ +.+++++| ++++. ++..+++ + ||+|++++|+|+.+..
T Consensus 63 ~~Yp~~~~g~---~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~ 139 (423)
T 3ez1_A 63 RNYPGGVAGL---PSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFL 139 (423)
T ss_dssp TSSCSCTTCC---HHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHH
T ss_pred hCCCCCCCCh---HHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHH
Confidence 567 554 44 45556666667765 45555555 58884 5566677 7 5999999999998874
Q ss_pred HHHhhcCCCCeEEEeecCC----CHHHHHhhc--CCCceEEEE-ecCCCCccccccHH---HHHHHH-HHcCCEEEEeCC
Q 024619 109 LLSRVTPKTGVVVKRVNTC----DLDEVASAI--GPWTKLVWV-ESPTNPRQQICDIR---KIAEMA-HAHGALLLVDNS 177 (265)
Q Consensus 109 ~~~~~~~~~g~~~~~~~~~----d~~~l~~~~--~~~~~~i~~-~~~~np~G~~~~l~---~i~~~a-~~~~~~li~D~~ 177 (265)
.++..|.+++.++.+ |++++++++ .+++++|++ ++|+||||.+.+.+ +|+++| +++|+++|+||+
T Consensus 140 ----~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~ 215 (423)
T 3ez1_A 140 ----LLQTLGFELLTVDMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDA 215 (423)
T ss_dssp ----HHHHHTCEEEEEEEETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECT
T ss_pred ----HHHHcCCEEEeccCCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECC
Confidence 445678888888764 899999998 578999875 58999999998765 888888 999999999999
Q ss_pred cCCCCCcC--------C-------CCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHH
Q 024619 178 IMSPVLSR--------P-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (265)
Q Consensus 178 ~~~~~~~~--------~-------~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (265)
|+...+.. . ...+.++++.|+||++ + +|+++|+++.+++ +.+.+...........+...+..
T Consensus 216 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~-~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a 292 (423)
T 3ez1_A 216 YRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKIT-F-AGAGLGFVASSED-NIRWLSKYLGAQSIGPNKVEQAR 292 (423)
T ss_dssp TSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTS-C-SSSSCEEEEECHH-HHHHHHHHHHHSCSCCCHHHHHH
T ss_pred cchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhc-c-CCcceEEEEeCHH-HHHHHHHHHhhhccCCCHHHHHH
Confidence 98432211 1 1346789999999984 4 4789999988775 44545555555555566555444
Q ss_pred H
Q 024619 243 C 243 (265)
Q Consensus 243 ~ 243 (265)
+
T Consensus 293 ~ 293 (423)
T 3ez1_A 293 H 293 (423)
T ss_dssp H
T ss_pred H
Confidence 3
No 135
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.88 E-value=1.1e-21 Score=172.73 Aligned_cols=198 Identities=15% Similarity=0.084 Sum_probs=136.6
Q ss_pred eeEeeccCCCCCCCC----CCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHhC----CCceEE--ecc
Q 024619 11 TLLMNFSNEFDPYGA----LSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDK----ADRALC--FTS 78 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g----~~~~i~--~~~ 78 (265)
..+++|+ .++|+.+ .++|.+......... .....+.|++. |.+ +++++.+++...+| .+++++ +++
T Consensus 30 ~~~i~l~-~g~~~~~~~~~~~~~~v~~a~~~~~~-~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~g 107 (412)
T 1ajs_A 30 PRKVNLG-VGAYRTDDCQPWVLPVVRKVEQRIAN-NSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLG 107 (412)
T ss_dssp TTCEECC-SCCCCCTTSCCCCCHHHHHHHHHHHT-CTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEH
T ss_pred CCceeec-cceecCCCCCccccHHHHHHHHHhhh-ChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCC
Confidence 4578999 6665332 222333333211110 11134567655 654 47777777655433 345666 666
Q ss_pred hHHHHHHH---HHhcCCC-----CEEEEcCCCCCChHHHHHhhcCCCCeE-EEeecC---C----CHHHHHhhcCC---C
Q 024619 79 GMAALAAV---THLLGTG-----EEIVAGDDLYGGTDRLLSRVTPKTGVV-VKRVNT---C----DLDEVASAIGP---W 139 (265)
Q Consensus 79 g~~al~~~---~~~~~~g-----~~viv~~~~~~~~~~~~~~~~~~~g~~-~~~~~~---~----d~~~l~~~~~~---~ 139 (265)
|++|+.++ ..++++| |+|+++.|+|+++... ++..|.+ ++.++. + |++++++++.+ +
T Consensus 108 g~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 183 (412)
T 1ajs_A 108 GTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGV----FTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEF 183 (412)
T ss_dssp HHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHH----HHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTT
T ss_pred cHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHH----HHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCC
Confidence 67998633 3457899 9999999999998744 4556777 777775 2 78999888753 6
Q ss_pred ceEEEEecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc----C---C--C--CCCccEEEeccccccccC
Q 024619 140 TKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----R---P--L--ELGADIVMHSATKFIAGH 205 (265)
Q Consensus 140 ~~~i~~~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~----~---~--~--~~~~di~~~s~sK~~~g~ 205 (265)
++++++++|+||||.+.+ +++|+++|+++|+++|+||+|...... . . . ..+.++++.|+||.+ |+
T Consensus 184 ~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~ 262 (412)
T 1ajs_A 184 SIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNF-GL 262 (412)
T ss_dssp CEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTS-CC
T ss_pred cEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEeccccc-CC
Confidence 788889999999999964 678999999999999999998744332 1 1 1 123459999999999 67
Q ss_pred CCceeeEEEe
Q 024619 206 SDVMAGVLAV 215 (265)
Q Consensus 206 ~g~~~G~v~~ 215 (265)
+|+|.|++++
T Consensus 263 ~G~riG~~~~ 272 (412)
T 1ajs_A 263 YNERVGNLTV 272 (412)
T ss_dssp GGGCEEEEEE
T ss_pred CCcceEEEEE
Confidence 8899999998
No 136
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.87 E-value=2.9e-22 Score=174.09 Aligned_cols=190 Identities=16% Similarity=0.177 Sum_probs=132.9
Q ss_pred hhHHHHHHHHHhHhCC-CceEEecchHHHHH-HHHH---hc---CCC-CEEEEcCCCCCChHHHHHhhcCC----CCeE-
Q 024619 55 PTRDALESLLAKLDKA-DRALCFTSGMAALA-AVTH---LL---GTG-EEIVAGDDLYGGTDRLLSRVTPK----TGVV- 120 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~-~~~i~~~~g~~al~-~~~~---~~---~~g-~~viv~~~~~~~~~~~~~~~~~~----~g~~- 120 (265)
+...++++.+++++|. ++++++++|++|+. ++.. +. ++| |+|++.+|+|+.+...+...... .+..
T Consensus 70 ~~~~~l~~~la~~~g~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 149 (375)
T 2eh6_A 70 PWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEP 149 (375)
T ss_dssp HHHHHHHHHHHHTSSSCEEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCS
T ss_pred HHHHHHHHHHHhhcCCCCeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCC
Confidence 5578899999999998 66777777789986 4432 35 788 99999999998876543222111 1222
Q ss_pred ----EEeecCCCHHHHHhhcCCCceEEEEecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcC---CCC
Q 024619 121 ----VKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR---PLE 188 (265)
Q Consensus 121 ----~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~---~~~ 188 (265)
+..++..|++++++++.+++++|++++++||||.+.+ +++|.++|+++|+++|+||+|+ .+..+. ...
T Consensus 150 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 229 (375)
T 2eh6_A 150 LVPGFSYAKLNDIDSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQH 229 (375)
T ss_dssp CCSSEEEECTTCHHHHHTTCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGG
T ss_pred CCCCceeCCCchHHHHHHHhcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhh
Confidence 5666677999999999889999999999999999987 9999999999999999999998 333221 122
Q ss_pred CC--ccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHHHhccCc
Q 024619 189 LG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT 249 (265)
Q Consensus 189 ~~--~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 249 (265)
.+ .|++ |+||++++ |++.|+++++++.+ +.+...........++..+..+...|+.
T Consensus 230 ~~~~~d~~--s~SK~~~~--g~~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (375)
T 2eh6_A 230 FNLKPDVI--ALAKGLGG--GVPIGAILAREEVA-QSFTPGSHGSTFGGNPLACRAGTVVVDE 287 (375)
T ss_dssp GTCCCSEE--EECGGGGT--TSCCEEEEEEHHHH-TTCCTTSCCCSSTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEE--EEcccccC--CCCeEEEEEcHHHH-hhhcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 23 6776 67799953 57889998877533 3222111122233455555544444443
No 137
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.87 E-value=8.2e-22 Score=171.17 Aligned_cols=162 Identities=14% Similarity=0.122 Sum_probs=130.3
Q ss_pred hhHHHHHHHHHhHhCCC---ceEEec-chHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC--
Q 024619 55 PTRDALESLLAKLDKAD---RALCFT-SGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~---~~i~~~-~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (265)
+..+++++++++++|.+ +.++++ +|++++. ++..++++||+|++..|.|.+.. +...++..|.+++.++.+
T Consensus 52 ~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 129 (376)
T 3f0h_A 52 STMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHR--FVQLCEIHEIPYVALKLEHG 129 (376)
T ss_dssp HHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEESSHHHHH--HHHHHHHTTCCEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeCCCC
Confidence 45889999999999876 355545 4579986 67778999999999988776543 223455667788777643
Q ss_pred ---CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcC-CCCCCccEEEeccccccc
Q 024619 128 ---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATKFIA 203 (265)
Q Consensus 128 ---d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~-~~~~~~di~~~s~sK~~~ 203 (265)
|++++++++.+++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+.... ....+.|+++.|++|+++
T Consensus 130 ~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l~ 209 (376)
T 3f0h_A 130 KKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVLA 209 (376)
T ss_dssp CCCCHHHHHTTTTSCCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTTC
T ss_pred CCCCHHHHHHhhccCceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCccccccccCccEEEecCccccc
Confidence 8999999888899999999999999999999999999999999999999998776542 223468999999999997
Q ss_pred cCCCceeeEEEeechhH
Q 024619 204 GHSDVMAGVLAVKGERL 220 (265)
Q Consensus 204 g~~g~~~G~v~~~~~~~ 220 (265)
+++|+ |+++.+++.+
T Consensus 210 ~~~G~--g~~~~~~~~~ 224 (376)
T 3f0h_A 210 CPPGI--SVIVLAPRGV 224 (376)
T ss_dssp CCSSC--EEEEECHHHH
T ss_pred CCCce--EEEEECHHHH
Confidence 68874 7777776544
No 138
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.87 E-value=4.8e-22 Score=173.29 Aligned_cols=162 Identities=17% Similarity=0.234 Sum_probs=131.8
Q ss_pred hhHHHHHHHHHhHhCCC--c-eEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC----
Q 024619 55 PTRDALESLLAKLDKAD--R-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---- 126 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~-~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~---- 126 (265)
+..+++++++++++|.+ + ++++++|++++. ++..++++||+|+++.+.|.+.. +...++..|.+++.++.
T Consensus 56 ~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~ 133 (393)
T 3kgw_A 56 QIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMR--AAEIADRIGARVHQMIKKPGE 133 (393)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCCC
Confidence 45788999999999876 2 445566678886 77778999999999988774321 23555677889888875
Q ss_pred -CCHHHHHhhcCC-CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcC-CCCCCccEEEeccccccc
Q 024619 127 -CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATKFIA 203 (265)
Q Consensus 127 -~d~~~l~~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~-~~~~~~di~~~s~sK~~~ 203 (265)
.|++++++++.+ ++++|++++++||||.+.|+++|.++|++||+++|+||+|+.+.... ....+.|+++.|+||+++
T Consensus 134 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~~ 213 (393)
T 3kgw_A 134 HYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLN 213 (393)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTTC
T ss_pred CCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCccccc
Confidence 389999999987 89999999999999999999999999999999999999998765542 344578999999999987
Q ss_pred cCCCceeeEEEeechhH
Q 024619 204 GHSDVMAGVLAVKGERL 220 (265)
Q Consensus 204 g~~g~~~G~v~~~~~~~ 220 (265)
++.| .|+++++++.+
T Consensus 214 ~~~g--~g~~~~~~~~~ 228 (393)
T 3kgw_A 214 APPG--ISLISFNDKAK 228 (393)
T ss_dssp CCSS--CEEEEECHHHH
T ss_pred CCCc--eeEEEECHHHH
Confidence 7777 58888877554
No 139
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.87 E-value=2.9e-21 Score=171.61 Aligned_cols=192 Identities=15% Similarity=0.174 Sum_probs=138.2
Q ss_pred CccCCC-CCh-hHHHHHHHHHhHhCC----CceEEecchHHHHH-HHHHhcCCCC--------------EEEEc-CCCCC
Q 024619 47 YDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGE--------------EIVAG-DDLYG 104 (265)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~g~~al~-~~~~~~~~g~--------------~viv~-~~~~~ 104 (265)
+.|.+. |.+ +++++++++.+.+|. ++++++++|++|+. ++..++++|| +|++. .|+|+
T Consensus 77 ~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~ 156 (444)
T 3if2_A 77 ANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYI 156 (444)
T ss_dssp HSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCG
T ss_pred hccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCcc
Confidence 567766 665 588888888877653 34666666679986 6677788888 78775 99998
Q ss_pred ChHHHHH--hhcCCCCeEEEeecC----------CCHHHHHhh---cCCCceEEEEecCCCCcccccc---HHHHHHHHH
Q 024619 105 GTDRLLS--RVTPKTGVVVKRVNT----------CDLDEVASA---IGPWTKLVWVESPTNPRQQICD---IRKIAEMAH 166 (265)
Q Consensus 105 ~~~~~~~--~~~~~~g~~~~~~~~----------~d~~~l~~~---~~~~~~~i~~~~~~np~G~~~~---l~~i~~~a~ 166 (265)
.+..... ......|.+++.++. .|+++++++ +.+++++|++++|+||||.+.+ +++|+++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~ 236 (444)
T 3if2_A 157 GYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAK 236 (444)
T ss_dssp GGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred chhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHH
Confidence 8852110 023446777777663 389999988 6788999999999999999988 899999999
Q ss_pred HcCCEEEEeCCcCCCCCc------CCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHH
Q 024619 167 AHGALLLVDNSIMSPVLS------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDC 240 (265)
Q Consensus 167 ~~~~~li~D~~~~~~~~~------~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (265)
+||+++|+||+|+.+... .+...+.+++++|+||+ +.+|+++|+++.+++.+ ..+...........++..+
T Consensus 237 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~--~~~G~r~G~~~~~~~l~-~~~~~~~~~~~~~~~~~~~ 313 (444)
T 3if2_A 237 RYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI--GLPGMRTGIIVADAKVI-EAVSAMNAVVNLAPTRFGA 313 (444)
T ss_dssp HTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT--TCGGGCCEEEECCHHHH-HHHHHHHHHHHSSCCCHHH
T ss_pred HCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhc--cCCCCceEEEEECHHHH-HHHHHHHHhccCCCChHHH
Confidence 999999999999853221 11234678999999995 55689999998766544 4444444444444444443
Q ss_pred H
Q 024619 241 W 241 (265)
Q Consensus 241 ~ 241 (265)
.
T Consensus 314 ~ 314 (444)
T 3if2_A 314 A 314 (444)
T ss_dssp H
T ss_pred H
Confidence 3
No 140
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.87 E-value=2.6e-21 Score=168.33 Aligned_cols=161 Identities=11% Similarity=0.118 Sum_probs=126.2
Q ss_pred hHHHHHHHHHhHhCC------CceEEecchHHHHH-HHHHhc---CCCCEEEEc-CCCCCChHHHHHhhcCCCCeEEEee
Q 024619 56 TRDALESLLAKLDKA------DRALCFTSGMAALA-AVTHLL---GTGEEIVAG-DDLYGGTDRLLSRVTPKTGVVVKRV 124 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~------~~~i~~~~g~~al~-~~~~~~---~~g~~viv~-~~~~~~~~~~~~~~~~~~g~~~~~~ 124 (265)
...+++++++++++. +.++++++|++++. ++..+. ++||+|++. .+.|+.+. ...++..|.+++.+
T Consensus 39 ~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~---~~~~~~~g~~~~~v 115 (385)
T 2bkw_A 39 IFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRF---ADCLRSYGAQVDVV 115 (385)
T ss_dssp HHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHH---HHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHH---HHHHHHcCCceEEE
Confidence 356677788887765 24556666679986 666676 899999877 44554442 13445678899998
Q ss_pred cC------CCHHHHHhhcCC-CceEEEEecCCCCccccccHHHHHHHHHHc--CCEEEEeCCcCCCCCc-CCCCCCccEE
Q 024619 125 NT------CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVLS-RPLELGADIV 194 (265)
Q Consensus 125 ~~------~d~~~l~~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~--~~~li~D~~~~~~~~~-~~~~~~~di~ 194 (265)
+. .|++++++++.+ ++++|++++++||||.+.|+++|.++|+++ |+++|+|++|+.+... .....+.|++
T Consensus 116 ~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~ 195 (385)
T 2bkw_A 116 RPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFA 195 (385)
T ss_dssp CCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEE
T ss_pred ecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEE
Confidence 87 388999998876 799999999999999999999999999999 9999999999877653 2334578999
Q ss_pred EeccccccccCCCceeeEEEeechhHH
Q 024619 195 MHSATKFIAGHSDVMAGVLAVKGERLA 221 (265)
Q Consensus 195 ~~s~sK~~~g~~g~~~G~v~~~~~~~~ 221 (265)
++|+||+++|++|+ |+++++++.+.
T Consensus 196 ~~s~~K~~~~~~G~--G~~~~~~~~~~ 220 (385)
T 2bkw_A 196 LTASQKAIGAPAGL--SISLCSSRFMD 220 (385)
T ss_dssp EEESSSTTCCCSCE--EEEEECHHHHH
T ss_pred EecCccccccCCcc--eEEEEcHHHHH
Confidence 99999998888885 88888876543
No 141
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.87 E-value=1.6e-22 Score=177.25 Aligned_cols=199 Identities=13% Similarity=0.118 Sum_probs=139.2
Q ss_pred ceeEeeccCCC---CCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCCCceEEecchHHHHH-H
Q 024619 10 STLLMNFSNEF---DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-A 85 (265)
Q Consensus 10 ~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~ 85 (265)
+..+++|+ ++ +++|..++.+..+..-.... .......| ..+..+++++.+++++|.+.++++++|++|+. +
T Consensus 39 g~~~ld~~-~~~~~~~lg~~~~~v~~a~~~~~~~-~~~~~~~~---~~~~~~~l~~~la~~~g~~~v~~~~gg~~a~~~a 113 (397)
T 2ord_A 39 GNAYLDFT-SGIAVNVLGHSHPRLVEAIKDQAEK-LIHCSNLF---WNRPQMELAELLSKNTFGGKVFFANTGTEANEAA 113 (397)
T ss_dssp CCEEEESS-HHHHTCTTCBTCHHHHHHHHHHHHH-CSCCCTTS---EEHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHH
T ss_pred CCEEEECC-ccccccccCCCCHHHHHHHHHHHHh-cccCcccc---CCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHH
Confidence 35688997 54 88888444444443211111 11111111 23579999999999999888888888999986 4
Q ss_pred HHHhcC------C-CCEEEEcCCCCCChHHHHHhhcCCCCeE------------EEeecCCCHHHHHhhcCCCceEEEEe
Q 024619 86 VTHLLG------T-GEEIVAGDDLYGGTDRLLSRVTPKTGVV------------VKRVNTCDLDEVASAIGPWTKLVWVE 146 (265)
Q Consensus 86 ~~~~~~------~-g~~viv~~~~~~~~~~~~~~~~~~~g~~------------~~~~~~~d~~~l~~~~~~~~~~i~~~ 146 (265)
+..+.. + ++.|++.+|.|++.... .++..|.+ +..++..|++++++++.+++++|+++
T Consensus 114 l~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~---~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~ 190 (397)
T 2ord_A 114 IKIARKYGKKKSEKKYRILSAHNSFHGRTLG---SLTATGQPKYQKPFEPLVPGFEYFEFNNVEDLRRKMSEDVCAVFLE 190 (397)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEBTCCCCSSHH---HHHHSBCHHHHGGGCSCCTTEEEECTTCHHHHHHHCCTTEEEEEEC
T ss_pred HHHHHHHhhcCCCCCceEEEEcCCcCCCchh---hhhccCChhhccccCCCCCCeeEecCCCHHHHHHHhhcCeEEEEEe
Confidence 554442 5 47899999999765431 12223333 66777789999999998899999999
Q ss_pred cCCCCccc-c---ccHHHHHHHHHHcCCEEEEeCCcCCC-CCcCCC-----CCCccEEEeccccccccCCCceeeEEEee
Q 024619 147 SPTNPRQQ-I---CDIRKIAEMAHAHGALLLVDNSIMSP-VLSRPL-----ELGADIVMHSATKFIAGHSDVMAGVLAVK 216 (265)
Q Consensus 147 ~~~np~G~-~---~~l~~i~~~a~~~~~~li~D~~~~~~-~~~~~~-----~~~~di~~~s~sK~~~g~~g~~~G~v~~~ 216 (265)
+|+||||. + .++++|.++|+++|+++|+||+|+.. ..+.+. ....|++ |+||+++ +|++.|+++++
T Consensus 191 ~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~--~G~r~G~~~~~ 266 (397)
T 2ord_A 191 PIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL--TTAKGLG--GGVPIGAVIVN 266 (397)
T ss_dssp SEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG--TTSCCEEEEEC
T ss_pred cccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCee--eeccccC--CCcCeEEEEEc
Confidence 99999999 3 56899999999999999999999721 111111 1236765 7799995 46889999988
Q ss_pred chhH
Q 024619 217 GERL 220 (265)
Q Consensus 217 ~~~~ 220 (265)
++.+
T Consensus 267 ~~~~ 270 (397)
T 2ord_A 267 ERAN 270 (397)
T ss_dssp STTC
T ss_pred hHhc
Confidence 7643
No 142
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.87 E-value=2.2e-21 Score=169.56 Aligned_cols=161 Identities=19% Similarity=0.258 Sum_probs=131.7
Q ss_pred hhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHh-cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-----
Q 024619 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~-~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (265)
+...++++.+++++|.++++++++|++|+. ++..+ +++||+|+++.|+|+++... ++..|++++.++.+
T Consensus 39 ~~~~~l~~~la~~~~~~~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~~~ 114 (393)
T 1mdo_A 39 PKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNM----IVLLGANPVMVDVDRDTLM 114 (393)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHH----HHHTTCEEEEECBCTTTCC
T ss_pred hHHHHHHHHHHHHhCCCcEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHhHHHH----HHHCCCEEEEEeccCCcCC
Confidence 668899999999999988888888999986 66777 89999999999999988743 45678899888753
Q ss_pred -CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCCC-ccEEEeccc--cccc
Q 024619 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG-ADIVMHSAT--KFIA 203 (265)
Q Consensus 128 -d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~-~di~~~s~s--K~~~ 203 (265)
|++++++++.+++++|+++ ||+|.+.++++|.++|+++|+++|+|++|+.|........+ .|+++.|+| |+++
T Consensus 115 ~d~~~l~~~l~~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K~l~ 191 (393)
T 1mdo_A 115 VTPEHIEAAITPQTKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIKNIT 191 (393)
T ss_dssp BCHHHHHHHCCTTEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEETTSSSEEEEECCTTSSSC
T ss_pred CCHHHHHHhcCCCceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECCeecCCCCeEEEeCCCCCccc
Confidence 7899999998889998875 47999999999999999999999999999987543222234 899999999 8884
Q ss_pred cCCCceeeEEEeechhHHHHHH
Q 024619 204 GHSDVMAGVLAVKGERLAKELY 225 (265)
Q Consensus 204 g~~g~~~G~v~~~~~~~~~~~~ 225 (265)
+ | ++|+++.+++.+.+.+.
T Consensus 192 ~--~-~~g~~~~~~~~~~~~l~ 210 (393)
T 1mdo_A 192 C--A-EGGIVVTDNPQFADKLR 210 (393)
T ss_dssp S--S-SCEEEEESCHHHHHHHH
T ss_pred c--c-cceEEEeCCHHHHHHHH
Confidence 3 2 58999887555544443
No 143
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.87 E-value=6.5e-21 Score=165.30 Aligned_cols=162 Identities=17% Similarity=0.124 Sum_probs=127.7
Q ss_pred hhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHh---cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC---
Q 024619 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~---~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--- 127 (265)
+..+++++.+++++|.+.++++++|++|+. ++..+ +++||+|+++.|+|+++...+ +..|++++.++.+
T Consensus 32 ~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~ 107 (375)
T 2fnu_A 32 KRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANML----LESGYTPVFAGIKNDG 107 (375)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHHH----HHTTCEEEECCBCTTS
T ss_pred hHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHHHHH----HHCCCEEEEeccCCCC
Confidence 568899999999999987888888889986 67777 789999999999999997544 4478999998864
Q ss_pred --CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCC--CCCCccEEEeccc--cc
Q 024619 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP--LELGADIVMHSAT--KF 201 (265)
Q Consensus 128 --d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~--~~~~~di~~~s~s--K~ 201 (265)
|++++++++.+++++|+++++ +|.+.|+++|.++|+++|+++|+|++|+.+..... ...-.|+.+.|+| |+
T Consensus 108 ~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~ 184 (375)
T 2fnu_A 108 NIDELALEKLINERTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKP 184 (375)
T ss_dssp SBCGGGSGGGCCTTEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSS
T ss_pred CCCHHHHHhhcCcCceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCCCC
Confidence 789999999888999888776 99999999999999999999999999998765322 1111378888888 99
Q ss_pred cccCCCceeeEEEeechhHHHHHHH
Q 024619 202 IAGHSDVMAGVLAVKGERLAKELYF 226 (265)
Q Consensus 202 ~~g~~g~~~G~v~~~~~~~~~~~~~ 226 (265)
+ ++ |+ +++++.+++.+.+.+..
T Consensus 185 ~-~~-g~-g~~~~~~~~~~~~~~~~ 206 (375)
T 2fnu_A 185 I-TT-AE-GGAVVTNDSELHEKMKL 206 (375)
T ss_dssp S-CC-SS-CEEEEESCHHHHHHHHH
T ss_pred c-cc-cC-ceEEEeCCHHHHHHHHH
Confidence 9 55 53 44444344545444433
No 144
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.87 E-value=3.6e-22 Score=175.00 Aligned_cols=186 Identities=18% Similarity=0.159 Sum_probs=125.9
Q ss_pred CCCccCCC-CC-----h-hHHHHHHHHHhHhC----CCceEEecchH-HHHH-HHHHhcCCCC----EEEEcCCCCCChH
Q 024619 45 GPYDYTRS-GN-----P-TRDALESLLAKLDK----ADRALCFTSGM-AALA-AVTHLLGTGE----EIVAGDDLYGGTD 107 (265)
Q Consensus 45 ~~~~y~~~-g~-----~-~~~~l~~~l~~~~g----~~~~i~~~~g~-~al~-~~~~~~~~g~----~viv~~~~~~~~~ 107 (265)
....|++. |. + +++++++++. ..| .++.+++++|+ +++. ++..++++|| +|++++|+|+.+.
T Consensus 55 ~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~ 133 (391)
T 3bwn_A 55 LMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYV 133 (391)
T ss_dssp TCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHH
T ss_pred hhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHH
Confidence 44668777 65 4 3666666655 333 33467677775 8886 6777889999 9999999999987
Q ss_pred HHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcC-C
Q 024619 108 RLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-P 186 (265)
Q Consensus 108 ~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~-~ 186 (265)
. .++..|.+++.++.+ .+.++ .+++++|++++|+||||.+.+ +|++.++.+++++|+||+|..+.... .
T Consensus 134 ~----~~~~~g~~~~~~~~d-~~~l~---~~~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~~~~~l~ 203 (391)
T 3bwn_A 134 E----ETTYVRSGMYKWEGD-AWGFD---KKGPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWPHYTPIT 203 (391)
T ss_dssp H----HHHTTCBTTEEEEEE-STTCC---CCSCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCSTTTSCCC
T ss_pred H----HHHHcCCeEEEecCC-HHHcC---CCCCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCCCCCccc
Confidence 4 445667777766643 23332 357899999999999999986 45552233349999999998543211 1
Q ss_pred CCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHH
Q 024619 187 LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (265)
Q Consensus 187 ~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (265)
...+.+++++|+||.+ |++|+|.|++++.++.+.+.+...+.......+...+..
T Consensus 204 ~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a 258 (391)
T 3bwn_A 204 RRQDHDIMLFTFSKIT-GHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVR 258 (391)
T ss_dssp CCBCCSEEEEEHHHHH-SCGGGCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred cCCCCeEEEEechhhc-CCCccceEEEEecCHHHHHHHHHHhcccccCCCHHHHHH
Confidence 1346789999999999 788999999987444455555555544345556554443
No 145
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.87 E-value=3e-21 Score=169.91 Aligned_cols=191 Identities=18% Similarity=0.215 Sum_probs=132.8
Q ss_pred CccCCC-CCh-hHHHHHHHHHhHhCC----CceEEecchHHHHH-HHHHhcCCCC-----EEEEc-CCCCCChHHHHHh-
Q 024619 47 YDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGE-----EIVAG-DDLYGGTDRLLSR- 112 (265)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~g~~al~-~~~~~~~~g~-----~viv~-~~~~~~~~~~~~~- 112 (265)
+.|++. |.+ +++++++++.+.+|. ++++++++|++|+. ++..++++|| +|+++ .|+|+.+...+..
T Consensus 69 ~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~ 148 (417)
T 3g7q_A 69 CNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLED 148 (417)
T ss_dssp HSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----
T ss_pred eccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccch
Confidence 367766 664 588888888777653 24555556669996 6677888887 89997 9999888633211
Q ss_pred -hcCCCCeEEEeecC------CCHHHHHhhcCCCceEEEEecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCC
Q 024619 113 -VTPKTGVVVKRVNT------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPV 182 (265)
Q Consensus 113 -~~~~~g~~~~~~~~------~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~ 182 (265)
.....+..+..++. .|+++++ +.+++++|++++|+||||.+.+ +++|+++|++||+++|+||+|+...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~ 226 (417)
T 3g7q_A 149 DLFVSARPNIELLPEGQFKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPF 226 (417)
T ss_dssp CCEEECCCEEEEEGGGEEEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTT
T ss_pred hhhccccCcccccCCcccccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccc
Confidence 11223445555543 2778877 6778999999999999999987 8999999999999999999998532
Q ss_pred Cc------CCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHH
Q 024619 183 LS------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (265)
Q Consensus 183 ~~------~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (265)
.. .+...+.++++.|+|| + +.+|+++|+++.+++ +.+.+...........++..+..
T Consensus 227 ~~~~~~~~~~~~~~~~i~~~s~sK-~-~~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 289 (417)
T 3g7q_A 227 PGIIFSEARPLWNPNIILCMSLSK-L-GLPGSRCGIIIANDK-TITAIANMNGIISLAPGGMGPAM 289 (417)
T ss_dssp TCCBCSCCCCCCCTTEEEEEESGG-G-TCTTSCCEEEECCHH-HHHHHHHHHHHHCCCCCSHHHHH
T ss_pred ccccccccccCCCCCEEEEEechh-c-cCCCcceEEEEeCHH-HHHHHHHhhcceeeCCCcHHHHH
Confidence 11 1223467899999999 5 567899999988664 44545555554444445444433
No 146
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.87 E-value=8.1e-22 Score=173.53 Aligned_cols=163 Identities=18% Similarity=0.213 Sum_probs=126.9
Q ss_pred hhHHHHHHHHHhHhCCC--ceEEecchHHHHH-HHHHhc------CCCCE-EEEcCCCCCChHHHHHhhcCCC--CeEEE
Q 024619 55 PTRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL------GTGEE-IVAGDDLYGGTDRLLSRVTPKT--GVVVK 122 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~~i~~~~g~~al~-~~~~~~------~~g~~-viv~~~~~~~~~~~~~~~~~~~--g~~~~ 122 (265)
+..+++++.+++++|.+ .++++++|++++. ++..++ ++||+ |+++.+.|+++...+...++.. |.+++
T Consensus 71 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~ 150 (416)
T 1qz9_A 71 DLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLR 150 (416)
T ss_dssp GHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEE
Confidence 45889999999999986 4555555568885 556555 89987 5556667776655443333333 88999
Q ss_pred eecCCCHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCC-CCCccEEEeccccc
Q 024619 123 RVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL-ELGADIVMHSATKF 201 (265)
Q Consensus 123 ~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~-~~~~di~~~s~sK~ 201 (265)
.++. ++++++++.+++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.|...... ..+.|++++|++|+
T Consensus 151 ~v~~--~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~ 228 (416)
T 1qz9_A 151 LVDS--PEELPQAIDQDTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKY 228 (416)
T ss_dssp EESS--GGGHHHHCSTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSST
T ss_pred EeCc--HHHHHHHhCCCceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCccc
Confidence 9987 88999999888999999999999999999999999999999999999999977654222 34689999999999
Q ss_pred cccCCCceeeEEEeechhH
Q 024619 202 IAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 202 ~~g~~g~~~G~v~~~~~~~ 220 (265)
+.+++++ .|+++.+++.+
T Consensus 229 l~~g~~~-~g~l~~~~~~~ 246 (416)
T 1qz9_A 229 LNGGPGS-QAFVWVSPQLC 246 (416)
T ss_dssp TCCCTTC-CCEEEECTTTT
T ss_pred CCCCCCC-eEEEEECHHHH
Confidence 8655543 38988887643
No 147
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.87 E-value=7.6e-22 Score=172.61 Aligned_cols=197 Identities=15% Similarity=0.124 Sum_probs=134.1
Q ss_pred eeEeeccCCCCCCCC----CCCCeeeccccccCCCCCCCCCccCCC-CCh-hHHHHHHHHHhHh-CCCceEE--ecchHH
Q 024619 11 TLLMNFSNEFDPYGA----LSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLD-KADRALC--FTSGMA 81 (265)
Q Consensus 11 ~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~-g~~~~i~--~~~g~~ 81 (265)
..+++|+ .++|..+ .++|.+..+..... .....+.|++. |.+ +++++++++.... ..+.+++ +++|++
T Consensus 26 ~~~i~l~-~g~~~~~~~~~~~~~~v~~a~~~~~--~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~ 102 (394)
T 2ay1_A 26 QGKIDLG-VGVYKDATGHTPIMRAVHAAEQRML--ETETTKTYAGLSGEPEFQKAMGELILGDGLKSETTATLATVGGTG 102 (394)
T ss_dssp TTCEECC-CCSCCCTTSCCCCCHHHHHHHHHHH--HHCCCCCCCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHH
T ss_pred ccccccc-cceeeCCCCCccCcHHHHHHHHHhc--CCcccCCCCCCCCcHHHHHHHHHHHhCCCCCcccEEEEecCCchh
Confidence 3579999 7776432 22343433321110 00134567665 554 4666666663321 2234555 666678
Q ss_pred HHH-HHHHh--cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC---C----CHHHHHhhcCC---CceEEEEecC
Q 024619 82 ALA-AVTHL--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---C----DLDEVASAIGP---WTKLVWVESP 148 (265)
Q Consensus 82 al~-~~~~~--~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~----d~~~l~~~~~~---~~~~i~~~~~ 148 (265)
|+. ++..+ +.+||+|+++.|+|+++... ++..|.+++.++. + |++++++++.+ +++++++++|
T Consensus 103 a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~ 178 (394)
T 2ay1_A 103 ALRQALELARMANPDLRVFVSDPTWPNHVSI----MNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCC 178 (394)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEESCCHHHHHH----HHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSS
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCC
Confidence 986 44444 34999999999999998744 3456778888876 3 78999888753 3677888999
Q ss_pred CCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc------CC--C-C-CCccEEEeccccccccCCCceeeEEEe
Q 024619 149 TNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS------RP--L-E-LGADIVMHSATKFIAGHSDVMAGVLAV 215 (265)
Q Consensus 149 ~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~------~~--~-~-~~~di~~~s~sK~~~g~~g~~~G~v~~ 215 (265)
+||||.+.+ +++|+++|+++|+++|+||+|+..... .. . . .+.+++++|+||++ |++|+|.|++++
T Consensus 179 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~riG~~~~ 257 (394)
T 2ay1_A 179 HNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNF-GIYRERTGCLLA 257 (394)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTT-TCGGGCEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCC-cCcCCccceEEE
Confidence 999999975 678999999999999999999865432 01 1 1 23468899999999 677899999987
No 148
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.86 E-value=1.7e-20 Score=165.91 Aligned_cols=163 Identities=21% Similarity=0.218 Sum_probs=128.5
Q ss_pred hhHHHHHHHHHhHhCCCceEEecchHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC------C
Q 024619 55 PTRDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------D 128 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~g~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~------d 128 (265)
+...++++.+++++|.++++++++|++++.++...+.+||+|++++|+|+++... ++..|.+++.++.+ |
T Consensus 52 ~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~l~~l~~gd~Vlv~~~~~~~~~~~----~~~~G~~~~~v~~~~~~~~~d 127 (424)
T 2po3_A 52 PLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAGLTGEVIMPSMTFAATPHA----LRWIGLTPVFADIDPDTGNLD 127 (424)
T ss_dssp HHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHHTCCSEEEEESSSCTHHHHH----HHHTTCEEEEECBCTTTSSBC
T ss_pred HHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCEEEECCCccHHHHHH----HHHcCCEEEEEecCCCcCCcC
Confidence 5688999999999999888888888899974444445789999999999998743 45578899988754 7
Q ss_pred HHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcC--CCCCCccEEEeccc--ccccc
Q 024619 129 LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR--PLELGADIVMHSAT--KFIAG 204 (265)
Q Consensus 129 ~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~--~~~~~~di~~~s~s--K~~~g 204 (265)
++++++++.+++++|++++ |+|...++++|.++|+++|+++|+|++|+.+.... +.....|++++|+| |++++
T Consensus 128 ~~~l~~~i~~~~~~v~~~~---~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K~l~~ 204 (424)
T 2po3_A 128 PDQVAAAVTPRTSAVVGVH---LWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKAVNA 204 (424)
T ss_dssp HHHHGGGCCTTEEEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCC
T ss_pred HHHHHHhhCcCCcEEEEEC---CCCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCeecccccCEEEEeCCCCCCccC
Confidence 8999999988899998864 79999999999999999999999999999655321 22222579999998 77743
Q ss_pred CCCceeeEEEeechhHHHHHHHH
Q 024619 205 HSDVMAGVLAVKGERLAKELYFL 227 (265)
Q Consensus 205 ~~g~~~G~v~~~~~~~~~~~~~~ 227 (265)
.++|+++.+++.+.+.+...
T Consensus 205 ---~~~G~~v~~~~~l~~~l~~~ 224 (424)
T 2po3_A 205 ---FEGGAVVTDDADLAARIRAL 224 (424)
T ss_dssp ---SSCEEEEESCHHHHHHHHHH
T ss_pred ---CCCeEEEeCCHHHHHHHHHH
Confidence 46899988854554444433
No 149
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.86 E-value=1.3e-21 Score=168.07 Aligned_cols=159 Identities=16% Similarity=0.165 Sum_probs=127.6
Q ss_pred hHHHHHHHHHhHhCCC---ceEEec-chHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC----
Q 024619 56 TRDALESLLAKLDKAD---RALCFT-SGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---- 126 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~---~~i~~~-~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~---- 126 (265)
..+++++++++++|.+ +.++++ +|++|+. ++..+++ |+|+++++.|+++ .+...++..|.+++.++.
T Consensus 34 ~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~ 109 (353)
T 2yrr_A 34 VNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVNGAFSQ--RVAEMAALHGLDPEVLDFPPGE 109 (353)
T ss_dssp HHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEECSHHHH--HHHHHHHHTTCCEEEEECCTTS
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcCCCchH--HHHHHHHHcCCceEEEeCCCCC
Confidence 4889999999999974 445554 5568987 4555555 8999999999876 223455667888888875
Q ss_pred -CCHHHHHhhcCC-CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCC-CCCCccEEEeccccccc
Q 024619 127 -CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP-LELGADIVMHSATKFIA 203 (265)
Q Consensus 127 -~d~~~l~~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~-~~~~~di~~~s~sK~~~ 203 (265)
.|++++++.+.+ ++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+..... ...+.|+++.|++|++.
T Consensus 110 ~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~ 189 (353)
T 2yrr_A 110 PVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLS 189 (353)
T ss_dssp CCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTC
T ss_pred CCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCcccccccccccccCceEEEecCccccc
Confidence 478999998877 899999999999999999999999999999999999999987654322 22367999999999887
Q ss_pred cCCCceeeEEEeechhH
Q 024619 204 GHSDVMAGVLAVKGERL 220 (265)
Q Consensus 204 g~~g~~~G~v~~~~~~~ 220 (265)
+++| .|+++++++.+
T Consensus 190 ~~~g--~G~~~~~~~~~ 204 (353)
T 2yrr_A 190 APPG--LAPIAASLEAR 204 (353)
T ss_dssp CCSS--CEEEEECHHHH
T ss_pred CCCc--eEEEEECHHHH
Confidence 8777 48998887654
No 150
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.86 E-value=1.5e-21 Score=172.68 Aligned_cols=228 Identities=17% Similarity=0.150 Sum_probs=150.8
Q ss_pred ceeEeeccCCC---CCCCCCCCCeeeccccccCCCCCCCCCccCCC-CChhHHHHHHHHHhHhCCCceEEecchHHHHH-
Q 024619 10 STLLMNFSNEF---DPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDKADRALCFTSGMAALA- 84 (265)
Q Consensus 10 ~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~- 84 (265)
+..+++|+ ++ +++|..+|.+..+..-.... ... +++. ..+.++++++++++++|.+.++++++|++|+.
T Consensus 56 g~~~lD~~-~~~~~~~lG~~~p~v~~ai~~~~~~-~~~----~~~~~~~~~~~~l~~~la~~~g~~~v~~~~ggteA~~~ 129 (420)
T 2pb2_A 56 GKEYIDFA-GGIAVTALGHCHPALVEALKSQGET-LWH----TSNVFTNEPALRLGRKLIDATFAERVLFMNSGTEANET 129 (420)
T ss_dssp CCEEEESS-HHHHTCTTCBTCHHHHHHHHHHHTT-CCC----CCTTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHH
T ss_pred CCEEEEcc-ccccccccCCCCHHHHHHHHHHHHh-ccc----ccCccCCHHHHHHHHHHHhhCCCCeEEEeCCHHHHHHH
Confidence 45788997 44 78888554444443322221 111 1112 34679999999999999888888888999986
Q ss_pred HHHHhcC-------CC-CEEEEcCCCCCChHHHHHhhcCC---------CCeEEEeecCCCHHHHHhhcCCCceEEEEec
Q 024619 85 AVTHLLG-------TG-EEIVAGDDLYGGTDRLLSRVTPK---------TGVVVKRVNTCDLDEVASAIGPWTKLVWVES 147 (265)
Q Consensus 85 ~~~~~~~-------~g-~~viv~~~~~~~~~~~~~~~~~~---------~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~ 147 (265)
++..+.. +| ++|++.+|+|+++.......... ....+..++..|++++++++.+++++|++++
T Consensus 130 al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~le~~i~~~~~~vi~~p 209 (420)
T 2pb2_A 130 AFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEP 209 (420)
T ss_dssp HHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTTCHHHHHHHCCTTEEEEEECS
T ss_pred HHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCCCHHHHHHHhccCceEEEEeC
Confidence 5555543 67 58999999998775332222111 0112566777799999999998999999999
Q ss_pred CCCCcccc----ccHHHHHHHHHHcCCEEEEeCCcCC-CCCcCC-----CCCCccEEEeccccccccCCCceeeEEEeec
Q 024619 148 PTNPRQQI----CDIRKIAEMAHAHGALLLVDNSIMS-PVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKG 217 (265)
Q Consensus 148 ~~np~G~~----~~l~~i~~~a~~~~~~li~D~~~~~-~~~~~~-----~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~ 217 (265)
++|++|.+ .++++|.++|++||+++|+||+|.. +..+.. .....|++ |++|+++ +|++.|++++++
T Consensus 210 ~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii--t~sK~l~--~G~~iG~~~~~~ 285 (420)
T 2pb2_A 210 IQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL--TSAKALG--GGFPVSAMLTTQ 285 (420)
T ss_dssp EETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG--TTSCCEEEEECH
T ss_pred CcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE--Eeccccc--CCCceEEEEEhH
Confidence 99988863 4689999999999999999999952 211211 12346776 6899995 468899999887
Q ss_pred hhHHHHHHHHHHhccCCCChhHHHHHHhccC
Q 024619 218 ERLAKELYFLQNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (265)
+ +.+.+...........++..++.+...|+
T Consensus 286 ~-l~~~l~~~~~~~t~~~~~~~~aa~~a~L~ 315 (420)
T 2pb2_A 286 E-IASAFHVGSHGSTYGGNPLACAVAGAAFD 315 (420)
T ss_dssp H-HHTTCC----CCEECCCHHHHHHHHHHHH
T ss_pred H-HHHhhcCCCcCcccCcCHHHHHHHHHHHH
Confidence 5 33333222223334556666555444443
No 151
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.86 E-value=8.8e-22 Score=172.34 Aligned_cols=197 Identities=18% Similarity=0.164 Sum_probs=135.6
Q ss_pred eeEeeccCCC---CCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCC--CceEEecchHHHHH-
Q 024619 11 TLLMNFSNEF---DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA--DRALCFTSGMAALA- 84 (265)
Q Consensus 11 ~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~--~~~i~~~~g~~al~- 84 (265)
..+++|+ ++ +++|..++.+..+..-.... .......| ..+..+++++.++++++. +.++++++|++|+.
T Consensus 45 ~~~ld~~-~~~~~~~~g~~~~~v~~a~~~~~~~-~~~~~~~~---~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~ 119 (395)
T 1vef_A 45 NEYIDCV-GGYGVANLGHGNPEVVEAVKRQAET-LMAMPQTL---PTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEA 119 (395)
T ss_dssp CEEEESS-HHHHTCTTCBTCHHHHHHHHHHHHH-CCCCCTTS---CCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHH
T ss_pred CEEEEcc-CccccccCCCCCHHHHHHHHHHHHh-CCCCcccc---CCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHH
Confidence 4678887 44 67777444444443211111 11111112 346799999999999954 45777777889986
Q ss_pred HHHHhc--CCCCEEEEcCCCCCChHHHHHhhcCCCCeE------------EEeecCCCHHHHHhhcCCCceEEEEecCCC
Q 024619 85 AVTHLL--GTGEEIVAGDDLYGGTDRLLSRVTPKTGVV------------VKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (265)
Q Consensus 85 ~~~~~~--~~g~~viv~~~~~~~~~~~~~~~~~~~g~~------------~~~~~~~d~~~l~~~~~~~~~~i~~~~~~n 150 (265)
++..+. .+|+.|++.+|.|++....+ ++..|.+ +..++..|++++++++.+++++|++++++|
T Consensus 120 al~~~~~~~~~~~vi~~~~~y~~~~~~~---~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~ 196 (395)
T 1vef_A 120 ALKFARAHTGRKKFVAAMRGFSGRTMGS---LSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPVQG 196 (395)
T ss_dssp HHHHHHHHHSCCEEEEETTCCCCSSHHH---HHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSEET
T ss_pred HHHHHHHHhCCCeEEEEcCCcCCCchhh---hhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCccC
Confidence 444442 67899999999997654221 1222332 555666799999999988899999988889
Q ss_pred Ccccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcCC-----CCCCccEEEeccccccccCCCceeeEEEeechh
Q 024619 151 PRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGER 219 (265)
Q Consensus 151 p~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~~-----~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~ 219 (265)
|||.+.+ +++|.++|++||+++|+||+|+ .+..+.. .....|++ |+||++++ |++.|+++++++.
T Consensus 197 ~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~--g~~~G~~~~~~~~ 271 (395)
T 1vef_A 197 EGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--TLAKALGG--GVPLGVAVMREEV 271 (395)
T ss_dssp TTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGT--TSSCEEEEEEHHH
T ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE--EEcccccC--CCceEEEEehHHH
Confidence 9999887 9999999999999999999998 2211211 12346766 78999954 5788999888753
No 152
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.86 E-value=3.6e-22 Score=176.80 Aligned_cols=160 Identities=19% Similarity=0.193 Sum_probs=116.0
Q ss_pred hHHHHHHHHHhHhCCC--ceEEecchHHHHH-HHHHhc--------CCCCEEEEcCCCCCCh-------------HHHHH
Q 024619 56 TRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL--------GTGEEIVAGDDLYGGT-------------DRLLS 111 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~g~~al~-~~~~~~--------~~g~~viv~~~~~~~~-------------~~~~~ 111 (265)
..+++++++++++|.+ +++++++|++++. ++..++ ++||+|++..|+|+.+ ...+.
T Consensus 62 ~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~ 141 (432)
T 3a9z_A 62 IINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLE 141 (432)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHH
Confidence 4689999999999986 3555555568886 555554 5899888888888654 22333
Q ss_pred hhcCCCCeEEEeecCC------CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcC----------CEEEEe
Q 024619 112 RVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG----------ALLLVD 175 (265)
Q Consensus 112 ~~~~~~g~~~~~~~~~------d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~----------~~li~D 175 (265)
..++..|.+++.++.+ |++++++++.+++++|++++|+||||.+.|+++|.++|+++| +++|+|
T Consensus 142 ~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livD 221 (432)
T 3a9z_A 142 HLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTD 221 (432)
T ss_dssp HHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEE
T ss_pred HHHHhcCcEEEEEecCcccCCcCHHHHHHhccCCceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEE
Confidence 4456678999988863 789999999989999999999999999999999999999999 999999
Q ss_pred CCcCCCCCcCC-CCCCccEEEeccccccccCCCceeeEEEeechh
Q 024619 176 NSIMSPVLSRP-LELGADIVMHSATKFIAGHSDVMAGVLAVKGER 219 (265)
Q Consensus 176 ~~~~~~~~~~~-~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~ 219 (265)
++|+.+..... ...+.|+++.|+||++ |+. +|+++++++.
T Consensus 222 ea~~~~~~~~~~~~~~~d~~~~s~~K~~-g~~---~G~~~~~~~~ 262 (432)
T 3a9z_A 222 AAQALGKRRVDVEDLGVDFLTIVGHKFY-GPR---IGALYVRGVG 262 (432)
T ss_dssp CTTTTTTSCCCHHHHCCSEEEEEGGGTT-CCS---CEEEEETTBT
T ss_pred chhhhCCcccChhhcCCCEEEEehhHhc-CCc---ceEEEEcccc
Confidence 99987754322 2346899999999987 553 6999888654
No 153
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.85 E-value=9.2e-22 Score=168.67 Aligned_cols=212 Identities=8% Similarity=0.034 Sum_probs=137.9
Q ss_pred eEeeccCCCCC-CCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhC---CC-c-eEEecchHHHHHH
Q 024619 12 LLMNFSNEFDP-YGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK---AD-R-ALCFTSGMAALAA 85 (265)
Q Consensus 12 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g---~~-~-~i~~~~g~~al~~ 85 (265)
.+++|+ .+.. ++ ++|.+..+..... .......|+..+ ..++++.++++++ .+ + ++++++|++++.+
T Consensus 20 ~~i~l~-~~~~~~~--~~~~v~~a~~~~~--~~~~~~~y~~~~---~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~ 91 (335)
T 1uu1_A 20 DKTYLA-LNENPFP--FPEDLVDEVFRRL--NSDALRIYYDSP---DEELIEKILSYLDTDFLSKNNVSVGNGADEIIYV 91 (335)
T ss_dssp CSEEES-SCCCSSC--CCHHHHHHHHHTC--CGGGGGSCCCSS---CHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHH
T ss_pred cceECC-CCCCCCC--CCHHHHHHHHHHh--hhhhhhcCCCCc---hHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHH
Confidence 578998 4444 33 3333333221111 111234454433 5667777777777 44 4 4455555689875
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-----CHHHHHhhcCCCceEEEEecCCCCccccccHHH
Q 024619 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (265)
Q Consensus 86 ~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~ 160 (265)
+...+ ||+|+++ |+|+++.. .++..|.+++.++.+ |++++ +++++|++++|+||||.+.+.++
T Consensus 92 ~~~~~--gd~Vl~~-p~y~~~~~----~~~~~g~~~~~v~~~~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~ 159 (335)
T 1uu1_A 92 MMLMF--DRSVFFP-PTYSCYRI----FAKAVGAKFLEVPLTKDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREE 159 (335)
T ss_dssp HHHHS--SEEEECS-SSCHHHHH----HHHHHTCEEEECCCCTTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHH
T ss_pred HHHHh--CCcEEEC-CCcHHHHH----HHHHcCCeEEEeccCCCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHH
Confidence 54444 8999999 99998874 345578899888864 33333 57899999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCCcCCCCC----cCCCCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCC
Q 024619 161 IAEMAHAHGALLLVDNSIMSPVL----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 236 (265)
Q Consensus 161 i~~~a~~~~~~li~D~~~~~~~~----~~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~ 236 (265)
+.++++..| ++|+||+|+.... ......+.++++.|+||++ |++|+|+|+++++++ +.+.+.... .....+
T Consensus 160 l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~-~~~~l~~~~--~~~~~~ 234 (335)
T 1uu1_A 160 IERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAF-SLAAQRVGYVVASEK-FIDAYNRVR--LPFNVS 234 (335)
T ss_dssp HHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTT-TCGGGCCEEEEECHH-HHHHHHHHS--CTTCSC
T ss_pred HHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhc-CCcccCeEEEEeCHH-HHHHHHHhc--CCCCcC
Confidence 999999888 9999999974221 1112345789999999999 667899999998654 334333322 223455
Q ss_pred hhHHHHHHhccC
Q 024619 237 PFDCWICLRGVK 248 (265)
Q Consensus 237 ~~~~~~~~~~l~ 248 (265)
+..+..+.+.++
T Consensus 235 ~~~~~~~~~~l~ 246 (335)
T 1uu1_A 235 YVSQMFAKVALD 246 (335)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC
Confidence 555544444443
No 154
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.85 E-value=3.3e-20 Score=162.57 Aligned_cols=162 Identities=16% Similarity=0.134 Sum_probs=129.3
Q ss_pred hhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHh-cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-----
Q 024619 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~-~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (265)
+...++++.+++++|.+.++++++|++|+. ++..+ +++||+|+++.|+|+++...+ +..|.+++.++.+
T Consensus 32 ~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~~~~~~ 107 (394)
T 1o69_A 32 EFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPI----CYLKAKPVFIDCDETYNI 107 (394)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHH----HHTTCEEEEECBCTTSSB
T ss_pred hHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHH----HHcCCEEEEEEeCCCCCc
Confidence 678999999999999988888888889986 66777 899999999999999997554 4478899888854
Q ss_pred CHHHHHhhcCC---CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCC---C-CCccEEEecccc
Q 024619 128 DLDEVASAIGP---WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL---E-LGADIVMHSATK 200 (265)
Q Consensus 128 d~~~l~~~~~~---~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~---~-~~~di~~~s~sK 200 (265)
|++++++++.+ ++++|++++ |+|...++++|.++|+++|+++|+|++|+.+...... . .+.|+..+|.+|
T Consensus 108 d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K 184 (394)
T 1o69_A 108 DVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNK 184 (394)
T ss_dssp CHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTS
T ss_pred CHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCc
Confidence 78999988865 789999885 7999999999999999999999999999966543211 1 246677777789
Q ss_pred ccccCCCceeeEEEeechhHHHHHHH
Q 024619 201 FIAGHSDVMAGVLAVKGERLAKELYF 226 (265)
Q Consensus 201 ~~~g~~g~~~G~v~~~~~~~~~~~~~ 226 (265)
.++ +. ++|+++++++.+.+.+..
T Consensus 185 ~l~-~~--~~G~~~~~~~~l~~~l~~ 207 (394)
T 1o69_A 185 IIT-TS--GGGMLIGKNKEKIEKARF 207 (394)
T ss_dssp SSC-CS--SCEEEEESCHHHHHHHHH
T ss_pred cCC-CC--CceEEEECCHHHHHHHHH
Confidence 884 33 479999875555444433
No 155
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.85 E-value=3.6e-21 Score=166.06 Aligned_cols=161 Identities=17% Similarity=0.232 Sum_probs=126.5
Q ss_pred hhHHHHHHHHHhHhCCC----ceEEecchHHHHH-HHHHhcCCCCEEEEcC-CCCCChHHHHHhhcCCCCeEEEeecC--
Q 024619 55 PTRDALESLLAKLDKAD----RALCFTSGMAALA-AVTHLLGTGEEIVAGD-DLYGGTDRLLSRVTPKTGVVVKRVNT-- 126 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~----~~i~~~~g~~al~-~~~~~~~~g~~viv~~-~~~~~~~~~~~~~~~~~g~~~~~~~~-- 126 (265)
+..+++++.+++++|.+ .++++++|++|+. ++..++++||+|++.+ +.|+... ...++..|.+++.++.
T Consensus 37 ~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vi~~~~~~~~~~~---~~~~~~~g~~~~~v~~~~ 113 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARM---VEMAGLMGIAHHAYDCGE 113 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHHHHHH---HHHHHHHTCCEEEEECCT
T ss_pred HHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcCCCCeEEEEeCCCccHHH---HHHHHHhCCceEEEeCCC
Confidence 45788999999999843 3666667779986 6777788999988765 5554322 2344556778887775
Q ss_pred ---CCHHHHHhhcCC--CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCC-CCCCccEEEecccc
Q 024619 127 ---CDLDEVASAIGP--WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP-LELGADIVMHSATK 200 (265)
Q Consensus 127 ---~d~~~l~~~~~~--~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~-~~~~~di~~~s~sK 200 (265)
.|++++++++.+ ++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+..... ...+.|++++|+||
T Consensus 114 ~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K 193 (366)
T 1m32_A 114 VARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANK 193 (366)
T ss_dssp TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSS
T ss_pred CCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCcc
Confidence 478999988864 588999999999999999999999999999999999999997765422 23468999999999
Q ss_pred ccccCCCceeeEEEeechhH
Q 024619 201 FIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 201 ~~~g~~g~~~G~v~~~~~~~ 220 (265)
+++++.|+ |+++++++.+
T Consensus 194 ~~~~~~g~--G~~~~~~~~~ 211 (366)
T 1m32_A 194 CIQGVPGF--AFVIAREQKL 211 (366)
T ss_dssp TTCCCSSE--EEEEEEHHHH
T ss_pred cccCCCce--EEEEECHHHH
Confidence 98777764 9998887544
No 156
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.85 E-value=8.1e-21 Score=172.09 Aligned_cols=160 Identities=21% Similarity=0.183 Sum_probs=131.5
Q ss_pred hHHHHHHHHHhHhCCC----ce--EEecchHHHHH-HHHHhcCCC--------CEEEEcCCCCCChHHHHHhhcCCCCeE
Q 024619 56 TRDALESLLAKLDKAD----RA--LCFTSGMAALA-AVTHLLGTG--------EEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~----~~--i~~~~g~~al~-~~~~~~~~g--------~~viv~~~~~~~~~~~~~~~~~~~g~~ 120 (265)
..+++++++++++|.+ .+ +++++|++|+. ++..+.++| |+|+++.++|+++. ..++..|++
T Consensus 140 le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~----~~~~~~G~~ 215 (514)
T 3mad_A 140 FEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFD----KAAQYFGIK 215 (514)
T ss_dssp HHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHH----HHHHHHTCE
T ss_pred HHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHH----HHHHHcCCe
Confidence 3667788889999876 34 77777789986 666666665 89999999999987 444567899
Q ss_pred EEeecCC-----CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCC------------
Q 024619 121 VKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL------------ 183 (265)
Q Consensus 121 ~~~~~~~-----d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~------------ 183 (265)
++.++.+ |++++++++.+++++|++++++||+|.+.|+++|.++|++||+++|+|++|+.+..
T Consensus 216 v~~v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~ 295 (514)
T 3mad_A 216 LVRTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPP 295 (514)
T ss_dssp EEEECBCTTSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCC
T ss_pred eEEeeeCCCCCCCHHHHHHHhccCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCc
Confidence 9999876 89999999999999999999999999999999999999999999999999986533
Q ss_pred cCCCCCCccEEEeccccccccCCCceeeEEEeechhHH
Q 024619 184 SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 221 (265)
Q Consensus 184 ~~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~ 221 (265)
......+.|+++.|++|++.++.+ +|+++.+++.+.
T Consensus 296 ~~~~~~g~d~~~~s~~K~l~~~~~--~g~~~~~~~~~~ 331 (514)
T 3mad_A 296 FDFRLEGVTSVSADTHKYGYGAKG--TSVILYRRPDLL 331 (514)
T ss_dssp CSTTSTTCCEEEECTTTTTCCCSS--CEEEEESSHHHH
T ss_pred ccccCCCCcEEEECchhccCCCCC--eEEEEEeCHHHh
Confidence 112344789999999999766655 588888876553
No 157
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.85 E-value=1.3e-20 Score=162.49 Aligned_cols=158 Identities=11% Similarity=0.114 Sum_probs=122.8
Q ss_pred hhHHHHHHHHHhHhCCC--c-eEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC---
Q 024619 55 PTRDALESLLAKLDKAD--R-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~-~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--- 127 (265)
...+++++++++++|.+ + ++++++|++++. ++.++.++ +.+++..+.|. . .+...++..|++++.++.+
T Consensus 43 ~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~~~~~-~--~~~~~~~~~g~~~~~v~~~~~~ 118 (362)
T 3ffr_A 43 EVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVEK-KSFHCVNGSFS-K--RFYEFAGELGREAYKEEAAFGK 118 (362)
T ss_dssp HHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCSS-EEEEEECSHHH-H--HHHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccCC-cEEEEcCcHHH-H--HHHHHHHHhCCCeEEEecCCCC
Confidence 35888999999999873 3 556666679986 66778877 54555555554 1 2224556678899888754
Q ss_pred --CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHc-CCEEEEeCCcCCCCCcCCCCCCccEEEecccccccc
Q 024619 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH-GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 204 (265)
Q Consensus 128 --d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~-~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~g 204 (265)
|+++++ +.+++++|++++|+||||.+.|+++|.++|++| |+++|+|++|+.+........ .|++++|+||++++
T Consensus 119 ~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~~-~d~~~~s~~K~~~~ 195 (362)
T 3ffr_A 119 GFYPADIT--VPADAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWTK-IDSVFFSVQKCFGL 195 (362)
T ss_dssp CCCGGGCC--CCTTCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTTS-CSEEEEETTSTTCC
T ss_pred CCCHHHHh--ccCCccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccChhH-CcEEEEecccccCC
Confidence 788887 678899999999999999999999999999999 999999999998775433333 89999999999976
Q ss_pred CCCceeeEEEeechhHH
Q 024619 205 HSDVMAGVLAVKGERLA 221 (265)
Q Consensus 205 ~~g~~~G~v~~~~~~~~ 221 (265)
++|+ |+++.+++.+.
T Consensus 196 ~~G~--g~~~~~~~~~~ 210 (362)
T 3ffr_A 196 PAGL--GVWILNDRVIE 210 (362)
T ss_dssp CSCC--EEEEEEHHHHH
T ss_pred CCce--EEEEECHHHHH
Confidence 8884 77877775543
No 158
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.85 E-value=6.3e-21 Score=170.63 Aligned_cols=164 Identities=10% Similarity=0.140 Sum_probs=129.8
Q ss_pred hhHHHHHHHHHhHhCCC-ceEEecch-HHHHH-HHHHhcCCCC---EEEEcCCCCCChHHHHHhhcCCCCeEE-----Ee
Q 024619 55 PTRDALESLLAKLDKAD-RALCFTSG-MAALA-AVTHLLGTGE---EIVAGDDLYGGTDRLLSRVTPKTGVVV-----KR 123 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~-~~i~~~~g-~~al~-~~~~~~~~g~---~viv~~~~~~~~~~~~~~~~~~~g~~~-----~~ 123 (265)
...+++++++++++|.+ +.+++++| ++++. ++.+++++|+ +|+++.|+|++....+...++..|.++ ..
T Consensus 111 ~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~ 190 (465)
T 3e9k_A 111 TGDESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMI 190 (465)
T ss_dssp GTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEE
T ss_pred HhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEE
Confidence 34788999999999987 45555555 58887 6677777655 499999999998776666667777764 22
Q ss_pred ecC-----CCHHHHHhhcC---CCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCC-CCCCccEE
Q 024619 124 VNT-----CDLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP-LELGADIV 194 (265)
Q Consensus 124 ~~~-----~d~~~l~~~~~---~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~-~~~~~di~ 194 (265)
.+. .|++++++++. +++++|++++++||||.+.|+++|.++|+++|+++++|++|+.|..... ...+.|++
T Consensus 191 ~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~ 270 (465)
T 3e9k_A 191 KPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFA 270 (465)
T ss_dssp CCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEE
T ss_pred ecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEE
Confidence 232 27999999985 6799999999999999999999999999999999999999998877533 24578999
Q ss_pred Eeccccccc-cCCCceeeEEEeechhH
Q 024619 195 MHSATKFIA-GHSDVMAGVLAVKGERL 220 (265)
Q Consensus 195 ~~s~sK~~~-g~~g~~~G~v~~~~~~~ 220 (265)
++|++|+++ ||.| .|+++.+++..
T Consensus 271 ~~s~~K~l~~gp~~--~g~l~~~~~~~ 295 (465)
T 3e9k_A 271 CWCSYKYLNAGAGG--IAGAFIHEKHA 295 (465)
T ss_dssp EECSSSTTCCCTTC--CCEEEECGGGT
T ss_pred EECcccccccCCCc--eEEEEEcHHHH
Confidence 999999995 5554 47777776543
No 159
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.84 E-value=2.7e-20 Score=160.25 Aligned_cols=193 Identities=16% Similarity=0.129 Sum_probs=140.2
Q ss_pred eEeeccCCCCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CC-hhHHHHHHHHHhHhCCC--ceEEecchHHHHH-HH
Q 024619 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GN-PTRDALESLLAKLDKAD--RALCFTSGMAALA-AV 86 (265)
Q Consensus 12 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~-~~~~~l~~~l~~~~g~~--~~i~~~~g~~al~-~~ 86 (265)
.++.|+ + ++.+..++.+..+.. .... .|... |. +.++++++++++++|.+ .++++++|++++. ++
T Consensus 14 ~~i~l~-~-~~~~~~~~~v~~a~~-~~~~-------~~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~ 83 (359)
T 1svv_A 14 KPYSFV-N-DYSVGMHPKILDLMA-RDNM-------TQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIAC 83 (359)
T ss_dssp -CEECS-C-SCSSCCCHHHHHHHH-HHTT-------CCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHH
T ss_pred eeEEec-C-CCcCCCCHHHHHHHH-HHHh-------hccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHH
Confidence 478998 4 666644443433332 1111 24333 44 56999999999999876 3556666779986 67
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC----CHHHHHhhcCCC-------ceEEEEecCCCCcccc
Q 024619 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPW-------TKLVWVESPTNPRQQI 155 (265)
Q Consensus 87 ~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----d~~~l~~~~~~~-------~~~i~~~~~~np~G~~ 155 (265)
..+.++||+|++++|+|+++... ..++..|.+++.++.+ |++++++.+.++ +++|++++| ||||.+
T Consensus 84 ~~~~~~gd~vl~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~ 160 (359)
T 1svv_A 84 SLALRPWEAVIATQLGHISTHET--GAIEATGHKVVTAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQ 160 (359)
T ss_dssp HHHCCTTEEEEEETTSHHHHSST--THHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCC
T ss_pred HHHhCCCCEEEEcccchHHHHHH--HHHhcCCCeeEEEeCCCCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCcee
Confidence 77889999999999999887531 0245578888888865 589999888654 899999999 799999
Q ss_pred cc---HHHHHHHHHHcCCEEEEeCCc---CCCCCcCCCC-----CCccEEEeccccccccCCCceeeEEEeechhH
Q 024619 156 CD---IRKIAEMAHAHGALLLVDNSI---MSPVLSRPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 156 ~~---l~~i~~~a~~~~~~li~D~~~---~~~~~~~~~~-----~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
.+ +++|.++|+++|+++|+||+| +.+..+.... ...|+++.|++|+. ++.| .|+++.+++.+
T Consensus 161 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g-~~~~--~g~l~~~~~~~ 233 (359)
T 1svv_A 161 YTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAG-GMFG--EALIILNDALK 233 (359)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTT-CSSC--EEEEECSGGGC
T ss_pred cCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCC-CCCc--eEEEEEcccHH
Confidence 87 899999999999999999998 4343332111 35789999999974 6654 48888776544
No 160
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.84 E-value=2.3e-20 Score=170.09 Aligned_cols=169 Identities=17% Similarity=0.220 Sum_probs=128.1
Q ss_pred CccCCC-CCh-hHHHHHHHH-HhHhCC------CceEEecchH-HHHH-HHHH-----hcCCCCEEEEcCCCCCChHHHH
Q 024619 47 YDYTRS-GNP-TRDALESLL-AKLDKA------DRALCFTSGM-AALA-AVTH-----LLGTGEEIVAGDDLYGGTDRLL 110 (265)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l-~~~~g~------~~~i~~~~g~-~al~-~~~~-----~~~~g~~viv~~~~~~~~~~~~ 110 (265)
..|++. |.+ +++++.+.+ .+.++. ++.+++++|+ +++. ++.. ++++||.|++++|+|+.+....
T Consensus 132 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~ 211 (546)
T 2zy4_A 132 CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIP 211 (546)
T ss_dssp CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHH
Confidence 468777 664 687766655 444321 2466666665 8886 4444 4789999999999999987432
Q ss_pred HhhcCCCCeEEEeecC-------CCHHHHHhhcCCCceEEEEecCCCCcccccc---HHHHHHHH--HHcCCEEEEeCCc
Q 024619 111 SRVTPKTGVVVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMA--HAHGALLLVDNSI 178 (265)
Q Consensus 111 ~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~---l~~i~~~a--~~~~~~li~D~~~ 178 (265)
.....|.+++.++. .|++++++.+.+++++|++++|+||||.+.+ +++|+++| +++|++||+||+|
T Consensus 212 --~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y 289 (546)
T 2zy4_A 212 --ELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY 289 (546)
T ss_dssp --HSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTT
T ss_pred --HHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcc
Confidence 23455788888875 4789999888888999999999999999976 67789998 7889999999999
Q ss_pred CCCCCc--CCC--CCCccEEEeccccccccCCCceeeEEEeech
Q 024619 179 MSPVLS--RPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (265)
Q Consensus 179 ~~~~~~--~~~--~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~ 218 (265)
+..... ... ..+.++++.|+||++ |.+|+|+|+++++++
T Consensus 290 ~~~~~~~~s~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~~ 332 (546)
T 2zy4_A 290 GTFADDFQSLFAICPENTLLVYSFSKYF-GATGWRLGVVAAHQQ 332 (546)
T ss_dssp GGGSTTCCCHHHHCGGGEEEEEESTTTT-TCGGGCEEEEEEESS
T ss_pred hhhcccCcCHHHhCCCCEEEEEeCcccc-CCCCcceEEEEECCH
Confidence 854432 111 125789999999999 677899999998875
No 161
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.84 E-value=5.7e-20 Score=163.21 Aligned_cols=161 Identities=19% Similarity=0.127 Sum_probs=129.9
Q ss_pred hhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHh---------cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEee
Q 024619 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL---------LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 124 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~---------~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~ 124 (265)
+..+++++.+++++|.++++++++|++|+. ++..+ +++||+|+++.++|+++...+ +..|.+++.+
T Consensus 62 ~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~----~~~g~~~~~v 137 (437)
T 3bb8_A 62 RFNDAFEKKLGEYLGVPYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPT----IQNGLIPVFV 137 (437)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHH----HHTTCEEEEC
T ss_pred hHHHHHHHHHHHHHCCCcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEE
Confidence 578999999999999998999999998886 66666 789999999999999997554 4578899888
Q ss_pred cCC------CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCCC--ccEEEe
Q 024619 125 NTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMH 196 (265)
Q Consensus 125 ~~~------d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~--~di~~~ 196 (265)
+.+ |++++++++.+++++|++++ ++|...++++|.++|+++|+++|+|++|+.+........+ .|+++.
T Consensus 138 ~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~ 214 (437)
T 3bb8_A 138 DVDIPTYNVNASLIEAAVSDKTKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYDGKMAGTFGDIGTV 214 (437)
T ss_dssp CEETTTTEECGGGHHHHCCTTEEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEE
T ss_pred eccCccCCcCHHHHHHhcCCCCeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECccccCceECCeecccccCEEEE
Confidence 754 79999999988899999874 3566689999999999999999999999977654333333 689889
Q ss_pred ccccccccCCCceeeEEEeechhHHHH
Q 024619 197 SATKFIAGHSDVMAGVLAVKGERLAKE 223 (265)
Q Consensus 197 s~sK~~~g~~g~~~G~v~~~~~~~~~~ 223 (265)
|++|...- +|.++|+++.+++.+...
T Consensus 215 s~~~~k~l-~~g~gg~~~~~~~~~~~~ 240 (437)
T 3bb8_A 215 SFYPAKHI-TMGEGGAVFTQSAELKSI 240 (437)
T ss_dssp ECSTTSSS-CCSSCEEEEESCHHHHHH
T ss_pred ECcCCcCC-CCCCeEEEEeCCHHHHHH
Confidence 88665532 345689998887665543
No 162
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.84 E-value=6.3e-20 Score=157.91 Aligned_cols=167 Identities=14% Similarity=0.124 Sum_probs=123.4
Q ss_pred ChhHHHHHHHHHhHhCCCc-eEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCC--CeEEEeecCC--
Q 024619 54 NPTRDALESLLAKLDKADR-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTC-- 127 (265)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~-~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~-- 127 (265)
.+..+++++++++++|.+. ++++++|++++. ++..+.++||+|+++.|.|.+.... ..+... |.+++.++.+
T Consensus 42 ~~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~~~~~~gd~vi~~~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 119 (356)
T 1v72_A 42 DELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDEC--GAPEFFSNGAKLMTVDGPAA 119 (356)
T ss_dssp SHHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHHTSCCTTEEEEECTTSHHHHSST--THHHHHTTSCEEEECCCGGG
T ss_pred chHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHHHhcCCCCEEEEcCccchhhhhc--hHHHHHhCCcEEEEecCCCC
Confidence 3678999999999999655 577778888886 6677788999999999988665311 002333 8899988865
Q ss_pred --CHHHHHh-hcCC-------CceEEEEecCCCCcccc---ccHHHHHHHHHHcCCEEEEeCCcCCCC------CcCCC-
Q 024619 128 --DLDEVAS-AIGP-------WTKLVWVESPTNPRQQI---CDIRKIAEMAHAHGALLLVDNSIMSPV------LSRPL- 187 (265)
Q Consensus 128 --d~~~l~~-~~~~-------~~~~i~~~~~~np~G~~---~~l~~i~~~a~~~~~~li~D~~~~~~~------~~~~~- 187 (265)
|++++++ ++.+ ++++|++++|+| ||.+ .++++|.++|++||+++|+|++|+.+. .....
T Consensus 120 ~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 198 (356)
T 1v72_A 120 KLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMT 198 (356)
T ss_dssp CCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTT
T ss_pred eEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhh
Confidence 8999999 8875 689999999987 9995 568999999999999999999986421 11111
Q ss_pred -CCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHH
Q 024619 188 -ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 227 (265)
Q Consensus 188 -~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~ 227 (265)
..+.|+++.|+||+ ++|.| +|+++.+++.+ +.....
T Consensus 199 ~~~~~d~~~~s~sK~-g~~~G--~g~~~~~~~~~-~~~~~~ 235 (356)
T 1v72_A 199 WKAGVDALSFGATKN-GVLAA--EAIVLFNTSLA-TEMSYR 235 (356)
T ss_dssp GGGTCCEEEECCGGG-TCSSC--EEEEESSGGGH-HHHHHH
T ss_pred hhhcCCEEEEecccC-CCcCc--cEEEEECHHHH-hhHHHH
Confidence 13678899999999 45543 26887765444 433333
No 163
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.84 E-value=1.4e-20 Score=166.96 Aligned_cols=226 Identities=13% Similarity=0.146 Sum_probs=141.9
Q ss_pred ceeEeeccCCCCC--CCCCCCCeeeccccccCCCCCCCCCccCCC-CChhHHHHHHHHHhHhCCCceEEecchHHHHH-H
Q 024619 10 STLLMNFSNEFDP--YGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDKADRALCFTSGMAALA-A 85 (265)
Q Consensus 10 ~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~ 85 (265)
+.++++|.+++++ +|..+|.+..+..-.... . . .+++. ..+...++++.+++++|.+.++++++|++|+. +
T Consensus 64 G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~-~--~--~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~a 138 (433)
T 1z7d_A 64 DKRYYDFLSAYSSVNQGHCHPNILNAMINQAKN-L--T--ICSRAFFSVPLGICERYLTNLLGYDKVLMMNTGAEANETA 138 (433)
T ss_dssp CCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTT-C--S--CCCTTSEEHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHH
T ss_pred CCEEEEcccchhhcccCCCCHHHHHHHHHHHHh-C--C--CccCCcCCHHHHHHHHHHHhhcCCCeEEEeCCHHHHHHHH
Confidence 4578899743443 454455555443322221 1 1 12222 23568999999999999888889999999986 4
Q ss_pred HHHhc---------CCC-CEEEEcCCCCCChHHHHHhhcCCCC------------eEEEeecCCCHHHHHhhc-CCCceE
Q 024619 86 VTHLL---------GTG-EEIVAGDDLYGGTDRLLSRVTPKTG------------VVVKRVNTCDLDEVASAI-GPWTKL 142 (265)
Q Consensus 86 ~~~~~---------~~g-~~viv~~~~~~~~~~~~~~~~~~~g------------~~~~~~~~~d~~~l~~~~-~~~~~~ 142 (265)
+..+. .+| ++|++.+|+|+++.... ....| ..+..++..|++++++++ .+++++
T Consensus 139 l~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~---~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~ 215 (433)
T 1z7d_A 139 YKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGC---ISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKDPNVCA 215 (433)
T ss_dssp HHHHHHHHHHTSCCCTTCCEEEEETTC-----------------------------CEEEECTTCHHHHHHHHTSTTEEE
T ss_pred HHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhh---hcccCCccccccCCCCCCCeEEeCCCCHHHHHHHhCCCCEEE
Confidence 44332 467 99999999998765321 11112 345667778999999999 577899
Q ss_pred EEEecCCCCccccc----cHHHHHHHHHHcCCEEEEeCCcCC-CCCcC-----CCCCCccEEEeccccccccCCC-ceee
Q 024619 143 VWVESPTNPRQQIC----DIRKIAEMAHAHGALLLVDNSIMS-PVLSR-----PLELGADIVMHSATKFIAGHSD-VMAG 211 (265)
Q Consensus 143 i~~~~~~np~G~~~----~l~~i~~~a~~~~~~li~D~~~~~-~~~~~-----~~~~~~di~~~s~sK~~~g~~g-~~~G 211 (265)
|++++.+|++|.+. ++++|.++|++||+++|+||+|.. +..+. ......|++ |++|+++ +| +++|
T Consensus 216 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~--~G~~~~G 291 (433)
T 1z7d_A 216 FIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI--LLGKALS--GGHYPIS 291 (433)
T ss_dssp EEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG--TTSSCCE
T ss_pred EEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEE--EECcccc--CCCCCeE
Confidence 99888888899875 799999999999999999999962 22121 112346776 7899995 46 7899
Q ss_pred EEEeechhHHHHHHHHHHhccCCCChhHHHHHHhccC
Q 024619 212 VLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 212 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (265)
+++++++.+ +.+...........++..++.....++
T Consensus 292 ~v~~~~~~~-~~l~~~~~~~t~~~~~~~~aaa~aal~ 327 (433)
T 1z7d_A 292 AVLANDDIM-LVIKPGEHGSTYGGNPLAASICVEALN 327 (433)
T ss_dssp EEEECHHHH-TTCCTTCCCCTTTTCHHHHHHHHHHHH
T ss_pred EEEECHHHH-hhhccccccccCCCCHHHHHHHHHHHH
Confidence 999877533 322211112223445555554444443
No 164
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.83 E-value=3.2e-20 Score=160.21 Aligned_cols=168 Identities=20% Similarity=0.170 Sum_probs=121.7
Q ss_pred hhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHhcCCCCE--EEEcCCCCCChHHHHHhhcCCCCeEEEeecCC----
Q 024619 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEE--IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~~~~g~~--viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (265)
+..+++++++++++|.+..+++++|++|+. ++..++++||. |+++.+.|.... .........|.+++.++.+
T Consensus 48 ~~~~~l~~~la~~~~~~~~i~~~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~ 126 (359)
T 3pj0_A 48 AVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIH-EQDGLKELQQITPLLLGTANQLL 126 (359)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHS-STTHHHHHHCCEEEECSCTTSCC
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHHhcCCCcEEEEeccceeeeh-hcchHHHhcCceEEecCCcCCCc
Confidence 678999999999999998888899998885 67777888886 555545443221 0001113358899888864
Q ss_pred CHHHHHhhcCCCceEEEEecCCCCc-cccccH---HHHHHHHHHcCCEEEEeCCcCCCCC---c---CCCCCCccEEEec
Q 024619 128 DLDEVASAIGPWTKLVWVESPTNPR-QQICDI---RKIAEMAHAHGALLLVDNSIMSPVL---S---RPLELGADIVMHS 197 (265)
Q Consensus 128 d~~~l~~~~~~~~~~i~~~~~~np~-G~~~~l---~~i~~~a~~~~~~li~D~~~~~~~~---~---~~~~~~~di~~~s 197 (265)
|+++++++ .+++++|++++|+||+ |.+.+. ++|+++|++||+++|+|++|..+.. . .....+.|+++.|
T Consensus 127 d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s 205 (359)
T 3pj0_A 127 TIDDIKSL-REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVS 205 (359)
T ss_dssp CHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEE
T ss_pred CHHHHHhc-cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEe
Confidence 89999988 7789999999999998 688764 5569999999999999999865432 1 1112457899999
Q ss_pred cccccccCCCceeeEEEeechhHHHHHHHHH
Q 024619 198 ATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 228 (265)
Q Consensus 198 ~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~ 228 (265)
+||+++++. +|+++.+++ +.+......
T Consensus 206 ~sK~~~~~~---gg~~~~~~~-l~~~~~~~~ 232 (359)
T 3pj0_A 206 FYKGIGGIA---GAILAGNDD-FVQEAKIWK 232 (359)
T ss_dssp SSSTTCCSS---CEEEEECHH-HHHHHHHHH
T ss_pred ccccCCCcc---eEEEECCHH-HHHHHHHHH
Confidence 999997663 377766654 444444433
No 165
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.83 E-value=3.2e-20 Score=165.05 Aligned_cols=229 Identities=14% Similarity=0.137 Sum_probs=148.2
Q ss_pred ceeEeeccCCCCC--CCCCCCCeeeccccccCCCCCCCCCccCCC-CChhHHHHHHHHHhHhCCCceEEecchHHHHH-H
Q 024619 10 STLLMNFSNEFDP--YGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDKADRALCFTSGMAALA-A 85 (265)
Q Consensus 10 ~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~ 85 (265)
+..+++|.+++++ +|..+|.+..+..-.... .. .+++. ..+...++++++++++|.+.++++++|++|+. +
T Consensus 75 g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~----~~-~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~a 149 (439)
T 2oat_A 75 GRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDK----LT-LTSRAFYNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETA 149 (439)
T ss_dssp CCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTT----CS-CCCTTSEESSHHHHHHHHHHHHTCSEEEEESSHHHHHHHH
T ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHHh----cC-cccCccCCHHHHHHHHHHHHhcCCCEEEEeCCHHHHHHHH
Confidence 4578999854555 444455455443322221 11 12222 23568999999999999888888899999986 4
Q ss_pred HHHhc---------CCC-CEEEEcCCCCCChHHHHHhhcCC------C---CeEEEeecCCCHHHHHhhcC-CCceEEEE
Q 024619 86 VTHLL---------GTG-EEIVAGDDLYGGTDRLLSRVTPK------T---GVVVKRVNTCDLDEVASAIG-PWTKLVWV 145 (265)
Q Consensus 86 ~~~~~---------~~g-~~viv~~~~~~~~~~~~~~~~~~------~---g~~~~~~~~~d~~~l~~~~~-~~~~~i~~ 145 (265)
+..+. .+| ++|++.+|.|++........... . ..++..++..|++++++++. +++++|++
T Consensus 150 l~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ 229 (439)
T 2oat_A 150 CKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQDPNVAAFMV 229 (439)
T ss_dssp HHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSSCHHHHHHHTTSTTEEEEEE
T ss_pred HHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEE
Confidence 44433 356 89999999998764322121110 0 03566777789999999994 67888988
Q ss_pred ecCCCCccccc----cHHHHHHHHHHcCCEEEEeCCcC-CCCCcC-----CCCCCccEEEeccccccccCCC-ceeeEEE
Q 024619 146 ESPTNPRQQIC----DIRKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSD-VMAGVLA 214 (265)
Q Consensus 146 ~~~~np~G~~~----~l~~i~~~a~~~~~~li~D~~~~-~~~~~~-----~~~~~~di~~~s~sK~~~g~~g-~~~G~v~ 214 (265)
++.++++|.+. ++++|.++|++||+++|+||+|. .+..+. ......|++ |++|++++ | +++|+++
T Consensus 230 ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~--t~sK~l~~--G~~~~G~v~ 305 (439)
T 2oat_A 230 EPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV--LLGKALSG--GLYPVSAVL 305 (439)
T ss_dssp CSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT--TSSCCEEEE
T ss_pred ECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEE--EecccccC--CCCCeEEEE
Confidence 88888899875 79999999999999999999995 221121 112346766 88999953 6 7889999
Q ss_pred eechhHHHHHHHHHHhccCCCChhHHHHHHhccC
Q 024619 215 VKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (265)
++++.+ +.+...........++..++.....++
T Consensus 306 ~~~~~~-~~l~~~~~~~t~~~~~~~~aaa~aal~ 338 (439)
T 2oat_A 306 CDDDIM-LTIKPGEHGSTYGGNPLGCRVAIAALE 338 (439)
T ss_dssp ECHHHH-TTSCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred ECHHHH-hccCCCCcccCCCcCHHHHHHHHHHHH
Confidence 887533 322211122233445555554444443
No 166
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.83 E-value=2.4e-20 Score=163.57 Aligned_cols=160 Identities=23% Similarity=0.244 Sum_probs=119.2
Q ss_pred HHHHHhHhCCCce-EEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCe--EEEeecC------CCHH
Q 024619 61 ESLLAKLDKADRA-LCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNT------CDLD 130 (265)
Q Consensus 61 ~~~l~~~~g~~~~-i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~--~~~~~~~------~d~~ 130 (265)
++++++++|.+.. +++++|++|+. ++..++++||+|++++|+|+++.... ..++..|. .++.++. .|++
T Consensus 75 r~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~d~~ 153 (407)
T 2dkj_A 75 IERAKALFGAAWANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHG-SRVNFSGKLYKVVSYGVRPDTELIDLE 153 (407)
T ss_dssp HHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGT-CTTSHHHHHSEEEEECCCTTTSSCCHH
T ss_pred HHHHHHHhCCCcceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchH-HHHHhcCceEEEEecCCCcccCccCHH
Confidence 3589999998854 67789998886 66777899999999999998883111 22333444 4555532 3789
Q ss_pred HHHhhcCC-CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc-----CCCCCCccEEEecccccccc
Q 024619 131 EVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVMHSATKFIAG 204 (265)
Q Consensus 131 ~l~~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~~~~~~di~~~s~sK~~~g 204 (265)
++++++.+ ++++|++++|+|| .+.|+++|.++|+++|+++|+||+|+.|... .... ..|++++|+||+++|
T Consensus 154 ~l~~~l~~~~~~~v~~~~p~~~--~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l~g 230 (407)
T 2dkj_A 154 EVRRLALEHRPKVIVAGASAYP--RFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP-YAHVVTSTTHKTLRG 230 (407)
T ss_dssp HHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT-TCSEEEEESSGGGCC
T ss_pred HHHHHHhhcCCeEEEEeccccC--CCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccc-cccEEEEeccccCCC
Confidence 99998874 8999999889997 6789999999999999999999999874432 1122 379999999998865
Q ss_pred CCCceeeEEEeechhHHHHHHHH
Q 024619 205 HSDVMAGVLAVKGERLAKELYFL 227 (265)
Q Consensus 205 ~~g~~~G~v~~~~~~~~~~~~~~ 227 (265)
+ ++|+++++++.+.+.+...
T Consensus 231 ~---~~G~~~~~~~~~~~~l~~~ 250 (407)
T 2dkj_A 231 P---RGGLILSNDPELGKRIDKL 250 (407)
T ss_dssp C---SCEEEEESCHHHHHHHHHH
T ss_pred C---CceEEEECCHHHHHHHHhh
Confidence 4 4699988844444444333
No 167
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.83 E-value=1.1e-19 Score=162.00 Aligned_cols=164 Identities=17% Similarity=0.161 Sum_probs=125.9
Q ss_pred ChhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHhcCCCCEEEEcCCCC-CChHHHHHhhcCCCCeEEEeecCC----
Q 024619 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLY-GGTDRLLSRVTPKTGVVVKRVNTC---- 127 (265)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (265)
.+...++++.+++++|.++++++++|++|+. ++..++++|| +++.|+| +.+. ..++..|.+++.++.+
T Consensus 74 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~----~~~~~~G~~~~~v~~~~~~~ 147 (456)
T 2ez2_A 74 SENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTR----YHQEKNGAVFVDIVRDEAHD 147 (456)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHH----HHHHHTTCEEEECBCGGGGC
T ss_pred ChhHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhH----HHHHHcCCEEEEeccccccc
Confidence 3668889999999999998999999999986 6777789999 7778898 5544 3345678888887643
Q ss_pred -----------CHHHHHhhcCCCc----eEEEEecCCC-Ccccccc---HHHHHHHHHHcCCEEEEeCCcCCC-------
Q 024619 128 -----------DLDEVASAIGPWT----KLVWVESPTN-PRQQICD---IRKIAEMAHAHGALLLVDNSIMSP------- 181 (265)
Q Consensus 128 -----------d~~~l~~~~~~~~----~~i~~~~~~n-p~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~------- 181 (265)
|++++++++.+++ ++|++++|+| |||.+.+ +++|+++|++||+++|+||+|+.|
T Consensus 148 ~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~ 227 (456)
T 2ez2_A 148 AGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKE 227 (456)
T ss_dssp TTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHH
T ss_pred ccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccc
Confidence 7899998886554 8999999999 9999876 999999999999999999999864
Q ss_pred --C-C-cCC-------CCCCccEEEeccccccccCCCceeeEEEeechhHHHHHHH
Q 024619 182 --V-L-SRP-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 226 (265)
Q Consensus 182 --~-~-~~~-------~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~ 226 (265)
. + +.. .....|+++.|++|++ ++ | ++|+++.+++.+.+.+..
T Consensus 228 ~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~-~~-~-~gG~~~~~~~~~~~~~~~ 280 (456)
T 2ez2_A 228 QEQGFENKSIAEIVHEMFSYADGCTMSGKKDC-LV-N-IGGFLCMNDDEMFSSAKE 280 (456)
T ss_dssp HSTTCTTSCHHHHHHHHHTTCSEEEEETTTTT-CC-S-SCEEEEESCHHHHHHHHH
T ss_pred cccccCCcchhhhhhhhcccCCEEEEeCcccC-CC-C-ceeEEEECCHHHHHHHHH
Confidence 1 2 221 1123688888889986 43 3 479998855455444433
No 168
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.83 E-value=9.2e-20 Score=160.34 Aligned_cols=166 Identities=20% Similarity=0.211 Sum_probs=117.4
Q ss_pred HHHHHHHHHhHhCCCc-eEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhh-cCCCCeEEEeecC-----CC
Q 024619 57 RDALESLLAKLDKADR-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRV-TPKTGVVVKRVNT-----CD 128 (265)
Q Consensus 57 ~~~l~~~l~~~~g~~~-~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~-~~~~g~~~~~~~~-----~d 128 (265)
.+.+++.+++++|.+. .+++++|++|+. ++..++++||+|++++|+|+++...+... ....+..++.++. .|
T Consensus 73 ~~~~~~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 152 (417)
T 3n0l_A 73 ETLAIERCKKLFNCKFANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRID 152 (417)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCC
T ss_pred HHHHHHHHHHHhCCCCcceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcC
Confidence 3345568899999885 488899998886 67788999999999999998765322111 1123455555554 48
Q ss_pred HHHHHhhcC-CCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCC-----cCCCCCCccEEEecccccc
Q 024619 129 LDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFI 202 (265)
Q Consensus 129 ~~~l~~~~~-~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~-----~~~~~~~~di~~~s~sK~~ 202 (265)
++++++++. +++++|++++++| |.+.++++|.++|++||+++|+|++|+.+.. ..... +.|++++|+||++
T Consensus 153 ~~~l~~~i~~~~~~~v~~~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l 229 (417)
T 3n0l_A 153 YEKVREIAKKEKPKLIVCGASAY--ARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-YAHVVSSTTHKTL 229 (417)
T ss_dssp HHHHHHHHHHHCCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-TCSEEEEESSTTT
T ss_pred HHHHHHHHHhcCCeEEEECCccc--CccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-cceEEEeeCcccc
Confidence 999999987 6899999888775 8899999999999999999999999865543 21222 4799999999999
Q ss_pred ccCCCceeeEEEeechhHHHHHHHHH
Q 024619 203 AGHSDVMAGVLAVKGERLAKELYFLQ 228 (265)
Q Consensus 203 ~g~~g~~~G~v~~~~~~~~~~~~~~~ 228 (265)
.|+ ++|+++++++.+.+.+....
T Consensus 230 ~g~---~~G~~~~~~~~~~~~~~~~~ 252 (417)
T 3n0l_A 230 RGP---RGGIIMTNDEELAKKINSAI 252 (417)
T ss_dssp CSC---SCEEEEESCHHHHHHHHHHH
T ss_pred CCC---CeeEEEECCHHHHHHHhhhh
Confidence 554 46999888555555444433
No 169
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.83 E-value=2.5e-19 Score=167.43 Aligned_cols=159 Identities=16% Similarity=0.125 Sum_probs=128.2
Q ss_pred hhHHHHHHHHHhHhCCCceEEecchH-HHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC------
Q 024619 55 PTRDALESLLAKLDKADRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------ 126 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~g~-~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~------ 126 (265)
...+++++.+++++|++..+++++|+ +++. ++.+++++||+|+++.++|.++... +++..|+++++++.
T Consensus 173 ~~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~---~~~l~Ga~~v~v~~~~~~~~ 249 (730)
T 1c4k_A 173 GPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNS---ALAMAGGRPVYLQTNRNPYG 249 (730)
T ss_dssp THHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH---HTTTTCCEEEEECEEECTTC
T ss_pred HHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHH---HHHHCCCEEEEEeCCccccC
Confidence 45899999999999999888888887 7775 7788899999999999999888632 26778999888763
Q ss_pred ----CCHHHH-----HhhcCCC------c----eEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCC-c--
Q 024619 127 ----CDLDEV-----ASAIGPW------T----KLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL-S-- 184 (265)
Q Consensus 127 ----~d~~~l-----~~~~~~~------~----~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~-~-- 184 (265)
.|++++ ++++.++ + ++|++++| |++|.+.|+++|+++|+++|+++++|++|+.+.. .
T Consensus 250 i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~ 328 (730)
T 1c4k_A 250 FIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPM 328 (730)
T ss_dssp CEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGG
T ss_pred ccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCcc
Confidence 267777 8888755 4 89999998 6899999999999999999999999999975321 1
Q ss_pred ----CCCCC---Ccc----EEEeccccccccCCCceeeEEEeechh
Q 024619 185 ----RPLEL---GAD----IVMHSATKFIAGHSDVMAGVLAVKGER 219 (265)
Q Consensus 185 ----~~~~~---~~d----i~~~s~sK~~~g~~g~~~G~v~~~~~~ 219 (265)
.+... +.| ++++|+||+++|+.+ +|+++.+++.
T Consensus 329 ~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~--gg~I~v~~~~ 372 (730)
T 1c4k_A 329 MRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQ--TSQIHKKDSH 372 (730)
T ss_dssp GGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTT--CEEEEEECGG
T ss_pred cCCcCcccccccCCCCCCEEEEECCCCCCCCCCC--EEEEEecchh
Confidence 12322 566 999999999977654 5788776654
No 170
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.83 E-value=3.5e-19 Score=155.64 Aligned_cols=161 Identities=21% Similarity=0.193 Sum_probs=127.2
Q ss_pred ChhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHh-------cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec
Q 024619 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-------LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN 125 (265)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~-------~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~ 125 (265)
.+..+++++.+++++|.++.+++++|++|+. ++..+ +++||+|+++.++|+++...+ +..|.+++.++
T Consensus 33 ~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~----~~~g~~~~~~~ 108 (390)
T 3b8x_A 33 GEYVKQYETQFAKTFGSKYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPL----QQYGLRVKFVD 108 (390)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHH----HHTTCEEEEEC
T ss_pred ChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEEe
Confidence 3678999999999999999999999998886 66677 788999999999999987544 45788998887
Q ss_pred CC------CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCCCc--cEEEec
Q 024619 126 TC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGA--DIVMHS 197 (265)
Q Consensus 126 ~~------d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~~--di~~~s 197 (265)
.+ |++++++++.+++++|++++ ++|...|+++|.++|+++|+++|+|++|+.|........+. |+.++|
T Consensus 109 ~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~g~~~~~~~~s 185 (390)
T 3b8x_A 109 IDINTLNIDIESLKEAVTDSTKAILTVN---LLGNPNNFDEINKIIGGRDIILLEDNCESMGATFNNKCAGTFGLMGTFS 185 (390)
T ss_dssp BCTTTCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETTEETTSSSSEEEEE
T ss_pred cCccccCcCHHHHHHHhCcCCeEEEEEC---CccChhhHHHHHHHHHHcCCEEEEECcCcccCEECCcccccccceEEEE
Confidence 64 89999999988899999874 57778999999999999999999999999876654333444 555544
Q ss_pred c--ccccccCCCceeeEEEeechhHHHHH
Q 024619 198 A--TKFIAGHSDVMAGVLAVKGERLAKEL 224 (265)
Q Consensus 198 ~--sK~~~g~~g~~~G~v~~~~~~~~~~~ 224 (265)
+ +|.+.++ ++|+++.++..+.+..
T Consensus 186 ~~~~k~~~~g---~gG~~~~~~~~l~~~~ 211 (390)
T 3b8x_A 186 SFYSNHIATM---EGGCIVTDDEEIYHIL 211 (390)
T ss_dssp CCTTSSSCSS---SCEEEEESCHHHHHHH
T ss_pred ccCCCCCccC---CceEEEeCCHHHHHHH
Confidence 3 4555332 3689988775554433
No 171
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.82 E-value=3.3e-20 Score=164.71 Aligned_cols=201 Identities=15% Similarity=0.083 Sum_probs=135.0
Q ss_pred cceeEeeccCCCCC---CCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHh--CC-CceEEecchHHH
Q 024619 9 VSTLLMNFSNEFDP---YGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD--KA-DRALCFTSGMAA 82 (265)
Q Consensus 9 ~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~--g~-~~~i~~~~g~~a 82 (265)
.+.++++|+ ++.+ +|..+|.+..+....... ...+.+.....+.++++++++++++ +. +.++++++|++|
T Consensus 41 ~g~~~lD~~-~~~~~~~lG~~~p~v~~a~~~~~~~---~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea 116 (439)
T 3dxv_A 41 NGRELIDLS-GAWGAASLGYGHPAIVAAVSAAAAN---PAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDA 116 (439)
T ss_dssp TSCEEEESS-TTTTTCTTCBSCHHHHHHHHHHHHS---CSCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHH
T ss_pred CCCEEEECC-CchhhccCCCCCHHHHHHHHHHHHh---ccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHH
Confidence 346789999 6766 887554444443222111 1122222222356999999999998 55 468888888899
Q ss_pred HH-HHHHh--cCCCCEEEEcCCCCCChHHHHHhhcCCCCeE--------------EEeecCC----------CHHHHHhh
Q 024619 83 LA-AVTHL--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV--------------VKRVNTC----------DLDEVASA 135 (265)
Q Consensus 83 l~-~~~~~--~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~--------------~~~~~~~----------d~~~l~~~ 135 (265)
+. ++..+ ..+++.|++.++.|++..... ....+.. +..++.+ |+++++++
T Consensus 117 ~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 193 (439)
T 3dxv_A 117 NEAAYRAIVKATGRSGVIAFAGAYHGCTVGS---MAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEK 193 (439)
T ss_dssp HHHHHHHHHHHHSCCEEEEETTCCCCSSHHH---HCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEECCCCCCCcHHH---HhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHH
Confidence 86 44443 346778888888887765332 1222211 2334443 58999998
Q ss_pred c----CCCceEEEEecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-CCCcC-----CCCCCccEEEeccccc
Q 024619 136 I----GPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSR-----PLELGADIVMHSATKF 201 (265)
Q Consensus 136 ~----~~~~~~i~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~~-~~~~~-----~~~~~~di~~~s~sK~ 201 (265)
+ .+++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+. +..+. ......|++ |+||.
T Consensus 194 l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~--s~sK~ 271 (439)
T 3dxv_A 194 LAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDIL--VLGKG 271 (439)
T ss_dssp HHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEE--EECGG
T ss_pred HHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEE--EEcch
Confidence 8 567889999999999999987 99999999999999999999962 21111 112345666 88999
Q ss_pred cccCCCceeeEEEeechhH
Q 024619 202 IAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 202 ~~g~~g~~~G~v~~~~~~~ 220 (265)
++ + |+++|+++++++.+
T Consensus 272 ~~-~-G~riG~~~~~~~~~ 288 (439)
T 3dxv_A 272 LG-G-GLPLSAVIAPAEIL 288 (439)
T ss_dssp GG-T-TSCCEEEEEEHHHH
T ss_pred hc-C-CcceEEEEECHHHH
Confidence 95 3 78999998876543
No 172
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.82 E-value=5e-20 Score=165.30 Aligned_cols=160 Identities=19% Similarity=0.276 Sum_probs=129.8
Q ss_pred hHHHHHHHHHhHhCCCceEEe-cchHHHHH-HHHHh----cCCCC-----EEEEcCCCCCChHHHHHhhcCCCCeEEEee
Q 024619 56 TRDALESLLAKLDKADRALCF-TSGMAALA-AVTHL----LGTGE-----EIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 124 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~-~~g~~al~-~~~~~----~~~g~-----~viv~~~~~~~~~~~~~~~~~~~g~~~~~~ 124 (265)
.++++++++++++|.+..+++ ++|++++. +++.+ .++|| +|+++++.|+++. ..++..|++++.+
T Consensus 108 l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~----~~~~~~G~~vv~v 183 (474)
T 1wyu_B 108 LMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNP----ATASMAGYQVREI 183 (474)
T ss_dssp HHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHH----HHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhH----HHHHHCCCEEEEe
Confidence 488999999999999865545 55668875 34333 35787 9999999999887 3446678999999
Q ss_pred cCC-----CHHHHHhhcCCCceEEEEecCCCCcccc-ccHHHHHHHHHHcCCEEEEeCCcCCCCCc--CCCCCCccEEEe
Q 024619 125 NTC-----DLDEVASAIGPWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIMSPVLS--RPLELGADIVMH 196 (265)
Q Consensus 125 ~~~-----d~~~l~~~~~~~~~~i~~~~~~np~G~~-~~l~~i~~~a~~~~~~li~D~~~~~~~~~--~~~~~~~di~~~ 196 (265)
+.+ |++++++++.+++++|++++| ||+|.+ .++++|+++|+++|+++|+|++|+.+.++ .+...+.|+++.
T Consensus 184 ~~~~~~~~d~~~L~~~i~~~t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~~ 262 (474)
T 1wyu_B 184 PSGPEGEVDLEALKRELGPHVAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHL 262 (474)
T ss_dssp CBCTTSSBCHHHHHHHCSTTEEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEEC
T ss_pred cCCCCCCcCHHHHHHhhCCCceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEEE
Confidence 875 899999999989999999998 689998 69999999999999999999999766542 233457899999
Q ss_pred ccccccccCC---CceeeEEEeechhH
Q 024619 197 SATKFIAGHS---DVMAGVLAVKGERL 220 (265)
Q Consensus 197 s~sK~~~g~~---g~~~G~v~~~~~~~ 220 (265)
|+||++++|. |.++|+++++++.+
T Consensus 263 s~~K~~~~p~g~gG~~~G~~~~~~~l~ 289 (474)
T 1wyu_B 263 NLHKTFTVPHGGGGPGSGPVGVKAHLA 289 (474)
T ss_dssp CTTTTTCCCCTTSCCCCCCEEECGGGG
T ss_pred eCccccccCCCCCCCCeEEEEEcHHHH
Confidence 9999997663 35689999988654
No 173
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.82 E-value=2.5e-20 Score=168.08 Aligned_cols=160 Identities=21% Similarity=0.192 Sum_probs=129.0
Q ss_pred hHHHHHHHHHhHhCCC----ceEEecchHHHHH-HHHHhcC-----CC---CEEEEcCCCCCChHHHHHhhcCCCCeEEE
Q 024619 56 TRDALESLLAKLDKAD----RALCFTSGMAALA-AVTHLLG-----TG---EEIVAGDDLYGGTDRLLSRVTPKTGVVVK 122 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~----~~i~~~~g~~al~-~~~~~~~-----~g---~~viv~~~~~~~~~~~~~~~~~~~g~~~~ 122 (265)
..+++++++++++|.+ ..+++++|++|+. ++..+.+ +| ++|+++.+.|+++. ..++..|++++
T Consensus 108 l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~----~~~~~~G~~~~ 183 (497)
T 3mc6_A 108 MESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFD----KAAYYFGMKLR 183 (497)
T ss_dssp HHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHH----HHHHHSCCEEE
T ss_pred HHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHH----HHHHHcCCeEE
Confidence 3678889999999876 4666667778885 5565543 45 89999999999886 44566789999
Q ss_pred eecCC------CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCC-----------C--
Q 024619 123 RVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-----------L-- 183 (265)
Q Consensus 123 ~~~~~------d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~-----------~-- 183 (265)
.++.+ |++++++++.+++++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+. .
T Consensus 184 ~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~ 263 (497)
T 3mc6_A 184 HVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPL 263 (497)
T ss_dssp EECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCC
T ss_pred EEecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCcc
Confidence 88754 5899999999999999999999999999999999999999999999999997322 1
Q ss_pred cCCCCCCccEEEeccccccccCCCceeeEEEeechhHH
Q 024619 184 SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 221 (265)
Q Consensus 184 ~~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~ 221 (265)
......+.|+++.|++|++.++.+ +|+++++++.+.
T Consensus 264 ~~~~~~g~d~~~~s~~K~l~~~~~--~g~~~~~~~~~~ 299 (497)
T 3mc6_A 264 LDFRVPGVTSISCDTHKYGFAPKG--SSVIMYRNSDLR 299 (497)
T ss_dssp CSTTSTTCCEEEEETTTTTCCCSS--CEEEECSSHHHH
T ss_pred ccccCCCCcEEEECchhhcCCCCC--ceeEEecCHHHH
Confidence 123345789999999999877765 588888876554
No 174
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.82 E-value=1.2e-19 Score=161.58 Aligned_cols=156 Identities=14% Similarity=0.131 Sum_probs=119.3
Q ss_pred ChhHHHHHHHHHhHhCCCceEEecchH-HHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC--C--
Q 024619 54 NPTRDALESLLAKLDKADRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--C-- 127 (265)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~g~-~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~-- 127 (265)
....+++++.+++ +|.++.+++++|+ +++. ++.+++++||+|++++++|+++...+ ...|+++++++. +
T Consensus 56 ~~~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~----~~~G~~~~~v~~~~~~~ 130 (446)
T 2x3l_A 56 EEVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHAL----DISQQEGHFIETHQSPL 130 (446)
T ss_dssp SSHHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHH----HHHTCCEEECEEEECTT
T ss_pred chHHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHH----HHcCCeEEEEeCeeccc
Confidence 3568899999999 9988777777775 8886 67778899999999999999987554 336777777765 3
Q ss_pred -------CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCC-C----cCCCCCCccEEE
Q 024619 128 -------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-L----SRPLELGADIVM 195 (265)
Q Consensus 128 -------d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~-~----~~~~~~~~di~~ 195 (265)
|++++ +.+++++|++++ .|++|.+.|+++|+++|+++|+++++||+|+... + ......+.|+++
T Consensus 131 ~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~g~Di~~ 206 (446)
T 2x3l_A 131 TNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYVV 206 (446)
T ss_dssp TSSEEEEEC----------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGGTCSEEE
T ss_pred cCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHcCCCEEE
Confidence 34555 456789999999 5669999999999999999999999999998621 1 123344689999
Q ss_pred eccccccccCCCceeeEEEeechhH
Q 024619 196 HSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 196 ~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
.|+||++.++.| +|+++++++.+
T Consensus 207 ~S~~K~l~~~~g--~g~l~~~~~~i 229 (446)
T 2x3l_A 207 QSFHKTLPALTM--GSVLYIHKNAP 229 (446)
T ss_dssp ECHHHHSSSCTT--CEEEEEETTCT
T ss_pred ECCccccccccc--cEEEEEcCCcC
Confidence 999998877766 59998887654
No 175
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.81 E-value=6e-19 Score=155.38 Aligned_cols=165 Identities=21% Similarity=0.242 Sum_probs=115.0
Q ss_pred hHHHH-HHHHHhHhCCCce-EEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhh-cCCCCeEEEeecCC----
Q 024619 56 TRDAL-ESLLAKLDKADRA-LCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRV-TPKTGVVVKRVNTC---- 127 (265)
Q Consensus 56 ~~~~l-~~~l~~~~g~~~~-i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~---- 127 (265)
..+++ ++.+++++|.+.. +++++|++|+. ++..++++||+|++++|+|++........ ....+.+++.++.+
T Consensus 78 ~~~~~a~~~~~~~~~~~~~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 157 (425)
T 3ecd_A 78 EVEALAIERVKRLFNAGHANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTM 157 (425)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCTTTS
T ss_pred HHHHHHHHHHHHHhCCCCceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccC
Confidence 44444 4888999999866 45888888885 67778999999999999998732111111 12223355566544
Q ss_pred --CHHHHHhhcC-CCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc-----CCCCCCccEEEeccc
Q 024619 128 --DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVMHSAT 199 (265)
Q Consensus 128 --d~~~l~~~~~-~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~~~~~~di~~~s~s 199 (265)
|++++++++. +++++|++++|+|| ...++++|.++|++||+++|+||+|+.+... .... ..|++++|+|
T Consensus 158 ~~d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~-~~di~~~s~s 234 (425)
T 3ecd_A 158 LIDYDQVEALAQQHKPSLIIAGFSAYP--RKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVE-HAHVVTSTTH 234 (425)
T ss_dssp SCCHHHHHHHHHHHCCSEEEEECSCCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG-TCSEEEEESS
T ss_pred ccCHHHHHHHHhhcCCcEEEEccccCC--CcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchh-cCcEEEecCC
Confidence 8999999886 58999999988884 5789999999999999999999997655432 1222 3789999999
Q ss_pred cccccCCCceeeEEEeechhHHHHHHH
Q 024619 200 KFIAGHSDVMAGVLAVKGERLAKELYF 226 (265)
Q Consensus 200 K~~~g~~g~~~G~v~~~~~~~~~~~~~ 226 (265)
|+++|+ ++|+++.+++.+.+....
T Consensus 235 K~l~g~---~~g~~~~~~~~~~~~~~~ 258 (425)
T 3ecd_A 235 KTLRGP---RGGFVLTNDEEIAKKINS 258 (425)
T ss_dssp GGGCCC---SCEEEEESCHHHHHHHHH
T ss_pred cccCCC---CcEEEEeCCHHHHHHHHh
Confidence 999554 479998886655554443
No 176
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.81 E-value=3e-19 Score=155.69 Aligned_cols=160 Identities=19% Similarity=0.237 Sum_probs=126.3
Q ss_pred hHHHHHHHHHhHhCCCceEEe-cchHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCC--eEEEeec-------
Q 024619 56 TRDALESLLAKLDKADRALCF-TSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVN------- 125 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~-~~g~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g--~~~~~~~------- 125 (265)
..+++++.+++++|.++.+++ ++|++|+.++..++++||+|++.++.|+++. +...++..| .+++.++
T Consensus 36 ~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~~~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~g~~ 113 (379)
T 3ke3_A 36 VMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVARQLTIDEDCLIIRNGWFSYR--WTQILEKGKFAKSSTVLTAERTEDT 113 (379)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHHHCTTCEEEEEECSHHHHH--HHHHHHHHCCSSEEEEEECEESSCC
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHHhCCCCCeEEEEeCCchhHH--HHHHHHHhCCCCceEEEeccccccc
Confidence 578899999999998865555 5677998755567789999999999887653 223333333 3555553
Q ss_pred -------CCCHHHHHhhcC-CCceEEEEecCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCc-CCCCCCccE
Q 024619 126 -------TCDLDEVASAIG-PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADI 193 (265)
Q Consensus 126 -------~~d~~~l~~~~~-~~~~~i~~~~~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~-~~~~~~~di 193 (265)
..|++++++++. +++++|++++++|++|.+.| +++|.++|+++|+++++|++++ |... .....+.|+
T Consensus 114 ~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~~~~~~~~~~d~ 192 (379)
T 3ke3_A 114 EAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCVWLDMKELGIDV 192 (379)
T ss_dssp SSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTCCCCHHHHTCSE
T ss_pred cccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccccccccCCCE
Confidence 358899999885 57999999999999999999 9999999999999999999998 6543 223447899
Q ss_pred EEeccccccccCCCceeeEEEeechhH
Q 024619 194 VMHSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 194 ~~~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
+++|++|++++|+| +|+++.+++.+
T Consensus 193 ~~~s~~K~l~~~~g--~g~~~~~~~~~ 217 (379)
T 3ke3_A 193 LISAPQKGWSSTPC--AGLVMLSAAAI 217 (379)
T ss_dssp EEECTTTTTCSCCC--EEEEEECHHHH
T ss_pred EEecchhhcCCCCc--eEEEEECHHHH
Confidence 99999999988877 58888877544
No 177
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.81 E-value=6.3e-20 Score=162.57 Aligned_cols=182 Identities=18% Similarity=0.173 Sum_probs=127.3
Q ss_pred ccCCC--C---Ch-hHHHHHHHHHhHhC--CC-ceEEecch-HHHHH-HHHHh--------cCCCCEEEEcCCCCCChHH
Q 024619 48 DYTRS--G---NP-TRDALESLLAKLDK--AD-RALCFTSG-MAALA-AVTHL--------LGTGEEIVAGDDLYGGTDR 108 (265)
Q Consensus 48 ~y~~~--g---~~-~~~~l~~~l~~~~g--~~-~~i~~~~g-~~al~-~~~~~--------~~~g~~viv~~~~~~~~~~ 108 (265)
.|++. | .+ +++++++++.+..+ .+ +.+++++| ++++. ++..+ +++||.|+++.|.|+.+..
T Consensus 91 ~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~ 170 (427)
T 2hox_A 91 SYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFRE 170 (427)
T ss_dssp SSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHH
T ss_pred cCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHH
Confidence 46654 5 44 46666666665433 22 45555555 58886 66778 8999999999999998875
Q ss_pred HHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc-CCC
Q 024619 109 LLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPL 187 (265)
Q Consensus 109 ~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~-~~~ 187 (265)
.+ +..|.+++.+. .|++++++++.+++++|++++|+||||.+.+ + + ++ ++..++|+++...... ...
T Consensus 171 ~~----~~~g~~~~~~~-~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~-~-~---l~--~~~~i~d~~~~~~~~s~~~~ 238 (427)
T 2hox_A 171 QT----KYFDKKGYVWA-GNAANYVNVSNPEQYIEMVTSPNNPEGLLRH-A-V---IK--GCKSIYDMVYYWPHYTPIKY 238 (427)
T ss_dssp HH----HHSCBTTEEEE-EEGGGGTTCSCGGGEEEEEESSCTTTCCCCC-C-S---ST--TCEEEEECTTCSTTTSCCCS
T ss_pred HH----HHcCCeeeeec-CCHHHHHHhhcCCceEEEEcCCCCCcccccH-H-H---Hc--CCCEEEeecccCCCCCcccc
Confidence 44 44565555443 3678888888888999999999999999998 3 2 23 5678999887542211 111
Q ss_pred CCCccEEEeccccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHH
Q 024619 188 ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (265)
Q Consensus 188 ~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (265)
..+.+++++||||.+ |++|+|+|+++++++.+.+.+...........+...+..
T Consensus 239 ~~~~~i~~~S~SK~~-g~~G~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a 292 (427)
T 2hox_A 239 KADEDILLFTMSKFT-GHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLR 292 (427)
T ss_dssp CBCCSEEEEEHHHHT-SCGGGCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHH
T ss_pred CCCceEEEEeChhcC-CCCCceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 256899999999998 778999999998655565656665555555566554443
No 178
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.81 E-value=1.6e-19 Score=158.19 Aligned_cols=159 Identities=22% Similarity=0.233 Sum_probs=115.6
Q ss_pred HHHHHHhHhCCCce-EEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCe--EEEeecC------CCH
Q 024619 60 LESLLAKLDKADRA-LCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNT------CDL 129 (265)
Q Consensus 60 l~~~l~~~~g~~~~-i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~--~~~~~~~------~d~ 129 (265)
+++++++++|.+.. +++++|++++. ++..++++||+|+++.|.|+++...+ ......|. +++.+++ .|+
T Consensus 74 ~r~~la~~~g~~~~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~d~ 152 (405)
T 2vi8_A 74 ARERAKQLFGAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHG-SPVNFSGVQYNFVAYGVDPETHVIDY 152 (405)
T ss_dssp HHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTT-CTTSHHHHHSEEEEECBCTTTCSBCH
T ss_pred HHHHHHHHhCCCceEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhccc-chhhhccceeEEEecccccccCCcCH
Confidence 45799999998854 45688898885 67777899999999999998874210 00122233 6666653 378
Q ss_pred HHHHhhcCC-CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcC---CCC-CCccEEEecccccccc
Q 024619 130 DEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR---PLE-LGADIVMHSATKFIAG 204 (265)
Q Consensus 130 ~~l~~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~---~~~-~~~di~~~s~sK~~~g 204 (265)
+++++++.+ ++++|+++ ++|. |...++++|.++|+++|+++|+||+|+.+.... ... ...|++++|+||+++|
T Consensus 153 ~~l~~~i~~~~~~~v~~~-~~~~-~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g 230 (405)
T 2vi8_A 153 DDVREKARLHRPKLIVAA-AAAY-PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRG 230 (405)
T ss_dssp HHHHHHHHHHCCSEEEEC-CSSC-CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCC
T ss_pred HHHHHHHHhcCCeEEEEe-CCCC-CccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCC
Confidence 999998875 78888874 4443 566789999999999999999999998543321 111 1578999999999976
Q ss_pred CCCceeeEEEeechhHHHHHH
Q 024619 205 HSDVMAGVLAVKGERLAKELY 225 (265)
Q Consensus 205 ~~g~~~G~v~~~~~~~~~~~~ 225 (265)
+.| |+++++++ +.+.+.
T Consensus 231 ~~g---G~~~~~~~-~~~~l~ 247 (405)
T 2vi8_A 231 PRG---GMILCQEQ-FAKQID 247 (405)
T ss_dssp CSC---EEEEECHH-HHHHHH
T ss_pred CCC---eEEEEcHH-HHHHHH
Confidence 765 88888754 434333
No 179
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.80 E-value=2.3e-19 Score=157.86 Aligned_cols=154 Identities=23% Similarity=0.248 Sum_probs=111.0
Q ss_pred HHHHHHHHHhHhCCCc-eEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCC--eEEEeecC-----C
Q 024619 57 RDALESLLAKLDKADR-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT-----C 127 (265)
Q Consensus 57 ~~~l~~~l~~~~g~~~-~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g--~~~~~~~~-----~ 127 (265)
.+.+++++++++|.+. .+++++|++++. ++..++++||+|+++.|.|+++.... ......| ..++.++. .
T Consensus 78 ~~~~~~~la~~~~~~~~~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~ 156 (420)
T 3gbx_A 78 EQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHG-SPVNFSGKLYNIVPYGIDESGKI 156 (420)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC-------------CHHHHSEEEEEEECTTCSC
T ss_pred HHHHHHHHHHHhCCCCceeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccc-hhhhhcccceeEEeccCCccCCc
Confidence 4455688999999884 456889998885 67888999999999999998743221 1112222 33333322 4
Q ss_pred CHHHHHhhcCC-CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCC-----cCCCCCCccEEEeccccc
Q 024619 128 DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKF 201 (265)
Q Consensus 128 d~~~l~~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~-----~~~~~~~~di~~~s~sK~ 201 (265)
|++++++++.+ ++++|++++|+|| ...++++|.++|++||+++|+||+|+.+.. ..... ..|++++|+||+
T Consensus 157 d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~di~~~s~sK~ 233 (420)
T 3gbx_A 157 DYDEMAKLAKEHKPKMIIGGFSAYS--GVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP-HAHVVTTTTHKT 233 (420)
T ss_dssp CHHHHHHHHHHHCCSEEEECCTTCC--SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT-TSSEEEEESSGG
T ss_pred CHHHHHHHHHhcCCeEEEEecCccC--CccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccc-cCCEEEeecccC
Confidence 89999999875 6999999888886 478999999999999999999999875543 22222 489999999999
Q ss_pred cccCCCceeeEEEeec
Q 024619 202 IAGHSDVMAGVLAVKG 217 (265)
Q Consensus 202 ~~g~~g~~~G~v~~~~ 217 (265)
++|+. +|+++.++
T Consensus 234 ~~g~~---gg~~~~~~ 246 (420)
T 3gbx_A 234 LAGPR---GGLILAKG 246 (420)
T ss_dssp GCSCS---CEEEEESS
T ss_pred CCCCC---ceEEEEcC
Confidence 97654 59998877
No 180
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.80 E-value=8e-19 Score=154.98 Aligned_cols=226 Identities=12% Similarity=0.066 Sum_probs=138.3
Q ss_pred eeEeeccCCC--CCCCCC-CCCeeeccccccCCCCCCCCCccCC--CCChhHHHHHHHHHhHhCCC---ceEEecchHHH
Q 024619 11 TLLMNFSNEF--DPYGAL-STPLYQTATFKQPSATENGPYDYTR--SGNPTRDALESLLAKLDKAD---RALCFTSGMAA 82 (265)
Q Consensus 11 ~~~~~~~~~~--~~~g~~-~~~~~~~~~~~~~~~~~~~~~~y~~--~g~~~~~~l~~~l~~~~g~~---~~i~~~~g~~a 82 (265)
..+++|++.. .++|.. +|.+..+..-.... .. .|+. ...+...++++.+++++|.+ +++++++|++|
T Consensus 42 ~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~----~~-~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea 116 (419)
T 2eo5_A 42 NKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQK----LA-HAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEA 116 (419)
T ss_dssp CEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTT----SC-CCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHH
T ss_pred CEEEEccCChhhhccCCCCCHHHHHHHHHHHhh----Cc-cccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHH
Confidence 4688887222 368877 55555554322221 11 1322 23356899999999999863 46666667799
Q ss_pred HH-HHHHhcC-CCCEEEEcCCCCCChHHHHHhhcC----------CCCeEEEeecCC---------------------CH
Q 024619 83 LA-AVTHLLG-TGEEIVAGDDLYGGTDRLLSRVTP----------KTGVVVKRVNTC---------------------DL 129 (265)
Q Consensus 83 l~-~~~~~~~-~g~~viv~~~~~~~~~~~~~~~~~----------~~g~~~~~~~~~---------------------d~ 129 (265)
+. ++..+.. +|++|++.+|.|+++......... ....+++.++.+ |+
T Consensus 117 ~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~ 196 (419)
T 2eo5_A 117 IEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVI 196 (419)
T ss_dssp HHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHH
Confidence 86 4544433 389999999999865543222111 111234444432 36
Q ss_pred HHHH-hhcC-----CCceEEEEecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcC-----CCCCCccE
Q 024619 130 DEVA-SAIG-----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADI 193 (265)
Q Consensus 130 ~~l~-~~~~-----~~~~~i~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~-----~~~~~~di 193 (265)
++++ +++. +++++|++++.+||||.+.+ +++|.++|++||+++|+||+|. .+..+. ......|+
T Consensus 197 ~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~ 276 (419)
T 2eo5_A 197 EFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDV 276 (419)
T ss_dssp HHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSE
T ss_pred HHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCE
Confidence 7888 7775 35667777666678897655 9999999999999999999997 332221 11224565
Q ss_pred EEeccccccccCCC-ceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHHHhccC
Q 024619 194 VMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 194 ~~~s~sK~~~g~~g-~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (265)
+ |+||.++ + | +++|+++++++.+ .. . .........++..+..+...++
T Consensus 277 ~--t~sK~~~-~-G~~riG~~~~~~~~~-~~-~-~~~~~t~~~n~~~~~aa~aal~ 325 (419)
T 2eo5_A 277 I--TLAKALG-G-GIMPIGATIFRKDLD-FK-P-GMHSNTFGGNALACAIGSKVID 325 (419)
T ss_dssp E--EECGGGG-T-TTSCCEEEEEEGGGC-CC--------CCCCCHHHHHHHHHHHH
T ss_pred E--Eeccccc-C-CccceEEEEEchHhh-cC-C-cccCCCCCCCHHHHHHHHHHHH
Confidence 5 7899995 3 7 8899999887655 32 2 1222334455555554444443
No 181
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.80 E-value=6.9e-19 Score=156.90 Aligned_cols=157 Identities=11% Similarity=-0.031 Sum_probs=125.1
Q ss_pred hHHHHHHHHHhHhCCCc-------eEEecchHHHHH-HHHHhcC--------CC-----CEEEEcCCCCCChHHHHHhhc
Q 024619 56 TRDALESLLAKLDKADR-------ALCFTSGMAALA-AVTHLLG--------TG-----EEIVAGDDLYGGTDRLLSRVT 114 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~~-------~i~~~~g~~al~-~~~~~~~--------~g-----~~viv~~~~~~~~~~~~~~~~ 114 (265)
..+++++++++++|.+. .+++++|++|+. +++++.+ +| ++|++++ .|.++. ..+
T Consensus 82 l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~----~~~ 156 (452)
T 2dgk_A 82 IDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWH----KFA 156 (452)
T ss_dssp HHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHH----HHH
T ss_pred HHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHH----HHH
Confidence 37788899999999762 567777778875 5555543 45 5899998 887775 555
Q ss_pred CCCCeEEEeecCC------CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHc------CCEEEEeCCcCCCC
Q 024619 115 PKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH------GALLLVDNSIMSPV 182 (265)
Q Consensus 115 ~~~g~~~~~~~~~------d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~------~~~li~D~~~~~~~ 182 (265)
+..|++++.++.+ |++++++++.+++++|++++|+||||.+.|+++|.++|+++ |+++++|++|+.+.
T Consensus 157 ~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~ 236 (452)
T 2dgk_A 157 RYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFL 236 (452)
T ss_dssp HHTTCEEEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGT
T ss_pred HHcCceEEEEecCCCCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHH
Confidence 6679999999864 79999999998999999999999999999999999999995 99999999998754
Q ss_pred C---cC--CC---CCCccEEEeccccccccCCCceeeEEEeechh
Q 024619 183 L---SR--PL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGER 219 (265)
Q Consensus 183 ~---~~--~~---~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~ 219 (265)
. .. .. ..+.|+++.|++||+.+|.+ +|+++.++..
T Consensus 237 ~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~--~G~~~~~~~~ 279 (452)
T 2dgk_A 237 APFVAPDIVWDFRLPRVKSISASGHKFGLAPLG--CGWVIWRDEE 279 (452)
T ss_dssp HHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSS--CEEEEESSGG
T ss_pred HHhhCccchhhcCCCCCcEEEECcccccCCCCC--eEEEEEcCHH
Confidence 3 11 11 23689999999998877665 6999887653
No 182
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.80 E-value=3.9e-19 Score=160.93 Aligned_cols=169 Identities=11% Similarity=0.004 Sum_probs=129.3
Q ss_pred CCccCCC-CCh-hHHHHHHHHHhHhCCC----ceEEecchHHHHH-HHHHhcC--------------CCCEEEEcCCCCC
Q 024619 46 PYDYTRS-GNP-TRDALESLLAKLDKAD----RALCFTSGMAALA-AVTHLLG--------------TGEEIVAGDDLYG 104 (265)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~~----~~i~~~~g~~al~-~~~~~~~--------------~g~~viv~~~~~~ 104 (265)
.+.|... +.. +.+++.+++++++|.+ ..+++++|++|+. ++..+.+ +++.|+++.+.|.
T Consensus 124 ~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~ 203 (511)
T 3vp6_A 124 MFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHY 203 (511)
T ss_dssp SSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCT
T ss_pred CCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchH
Confidence 3455544 222 3677888899999876 4567777777764 5444432 5678999999999
Q ss_pred ChHHHHHhhcCCCCe---EEEeecCC-----CHHHHHhhcCCC------ceEEEEecCCCCccccccHHHHHHHHHHcCC
Q 024619 105 GTDRLLSRVTPKTGV---VVKRVNTC-----DLDEVASAIGPW------TKLVWVESPTNPRQQICDIRKIAEMAHAHGA 170 (265)
Q Consensus 105 ~~~~~~~~~~~~~g~---~~~~~~~~-----d~~~l~~~~~~~------~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~ 170 (265)
++...+ +..|+ +++.++.+ |++++++++.++ +++|++++++|++|.+.|+++|+++|++||+
T Consensus 204 s~~~~~----~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~ 279 (511)
T 3vp6_A 204 SIKKAG----AALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNL 279 (511)
T ss_dssp HHHHHH----HHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTC
T ss_pred HHHHHH----HHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCC
Confidence 887443 44555 77777755 899999998654 8899999999999999999999999999999
Q ss_pred EEEEeCCcCCCCCcCC-------CCCCccEEEeccccccccCCCceeeEEEeechhH
Q 024619 171 LLLVDNSIMSPVLSRP-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 171 ~li~D~~~~~~~~~~~-------~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
++++|++|+.+.+..+ ...+.|+++++++||+++|.| +|+++.++...
T Consensus 280 ~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g--~g~l~~~~~~~ 334 (511)
T 3vp6_A 280 WLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQ--CSAILVKEKGI 334 (511)
T ss_dssp EEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESSTTH
T ss_pred EEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcC--eEEEEEeCHHH
Confidence 9999999998776422 122569999999999988876 58777877654
No 183
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.80 E-value=1.4e-19 Score=159.82 Aligned_cols=201 Identities=13% Similarity=0.135 Sum_probs=125.9
Q ss_pred ceeEeeccCCCC---CCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHh-C-C-CceEEecchHHHH
Q 024619 10 STLLMNFSNEFD---PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-K-A-DRALCFTSGMAAL 83 (265)
Q Consensus 10 ~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-g-~-~~~i~~~~g~~al 83 (265)
+..+++|+ ++. ++|..++.+..+....... .......|. ..+...++++.+++++ | . +.++++++|++|+
T Consensus 40 g~~~id~~-~~~~~~~lg~~~~~v~~a~~~~~~~-~~~~~~~~~--~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~ 115 (426)
T 1sff_A 40 GREYLDFA-GGIAVLNTGHLHPKVVAAVEAQLKK-LSHTCFQVL--AYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAV 115 (426)
T ss_dssp CCEEEESS-HHHHTCTTCBTCHHHHHHHHHHTTT-CSCCCTTTE--ECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHH
T ss_pred CCEEEEcc-cChhhcccCCCCHHHHHHHHHHHHh-CCCcccccc--CCHHHHHHHHHHHHhCCcccccEEEEeCchHHHH
Confidence 35688887 443 6787444444333211111 111111122 2356888999999998 5 3 3466666667998
Q ss_pred H-HHH---HhcCCCCEEEEcCCCCCChHHHHHhhcCC-------CCe---EEEeecCC----------CHHHHHhhcC--
Q 024619 84 A-AVT---HLLGTGEEIVAGDDLYGGTDRLLSRVTPK-------TGV---VVKRVNTC----------DLDEVASAIG-- 137 (265)
Q Consensus 84 ~-~~~---~~~~~g~~viv~~~~~~~~~~~~~~~~~~-------~g~---~~~~~~~~----------d~~~l~~~~~-- 137 (265)
. ++. .+.++| .|++.+|.|+.+...+...... .+. .++.++.+ |++++++++.
T Consensus 116 ~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~ 194 (426)
T 1sff_A 116 ENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKND 194 (426)
T ss_dssp HHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhc
Confidence 6 444 456776 8999999998765322222211 111 13444432 6788888775
Q ss_pred ---CCceEEEEe-cCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-CCCcC-----CCCCCccEEEeccccccc
Q 024619 138 ---PWTKLVWVE-SPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSR-----PLELGADIVMHSATKFIA 203 (265)
Q Consensus 138 ---~~~~~i~~~-~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~~-~~~~~-----~~~~~~di~~~s~sK~~~ 203 (265)
+++++|+++ +++| ||.+.+ +++|.++|++||+++|+||+|+. +..+. ......|++ |+||++
T Consensus 195 ~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~--s~sK~~- 270 (426)
T 1sff_A 195 AAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLT--TFAKSI- 270 (426)
T ss_dssp CCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEE--EECGGG-
T ss_pred cCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEE--EEcccc-
Confidence 467788774 4567 997766 99999999999999999999982 11111 112235554 889999
Q ss_pred cCCCceeeEEEeechhH
Q 024619 204 GHSDVMAGVLAVKGERL 220 (265)
Q Consensus 204 g~~g~~~G~v~~~~~~~ 220 (265)
++ |+++|+++++++.+
T Consensus 271 ~~-GlriG~~~~~~~~~ 286 (426)
T 1sff_A 271 AG-GFPLAGVTGRAEVM 286 (426)
T ss_dssp GT-SSCCEEEEEEHHHH
T ss_pred cC-CCceEEEEEcHHHH
Confidence 45 89999999887543
No 184
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.80 E-value=3.6e-19 Score=158.69 Aligned_cols=199 Identities=15% Similarity=0.123 Sum_probs=126.0
Q ss_pred ceeEeeccCCC---CCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHh-CCCceEEecchHHHHH-
Q 024619 10 STLLMNFSNEF---DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALA- 84 (265)
Q Consensus 10 ~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-g~~~~i~~~~g~~al~- 84 (265)
+..+++|+ ++ +++|..+|.+..+..-.... ...+.| ..+.++++++++++++ +.+.++++++|++|+.
T Consensus 56 g~~~iD~~-~~~~~~~lg~~~~~v~~a~~~~~~~---~~~~~~---~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~ 128 (453)
T 2cy8_A 56 GNVYLDFF-GGHGALVLGHGHPRVNAAIAEALSH---GVQYAA---SHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLL 128 (453)
T ss_dssp CCEEEESC-TTTTSCTTCBTCHHHHHHHHHHHTT---TCSSCS---SCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHH
T ss_pred CCEEEECc-ccHhhcccCCCCHHHHHHHHHHHHh---CCCCCC---CCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHH
Confidence 35688997 44 77888544454443322221 111211 3356899999999888 5556778888889986
Q ss_pred HHHHh--cCCCCEEEEcCCCCCChHHHHHhhc-------CCCCe------EEEeecCCCHHHHHhhcC---CCceEEEEe
Q 024619 85 AVTHL--LGTGEEIVAGDDLYGGTDRLLSRVT-------PKTGV------VVKRVNTCDLDEVASAIG---PWTKLVWVE 146 (265)
Q Consensus 85 ~~~~~--~~~g~~viv~~~~~~~~~~~~~~~~-------~~~g~------~~~~~~~~d~~~l~~~~~---~~~~~i~~~ 146 (265)
++... +.+++.|++.+|+|+++........ ...|+ .+..++..|++++++++. +++++|+++
T Consensus 129 al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~e 208 (453)
T 2cy8_A 129 ALRVARAFTGRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRPDDIEGMREVFANHGSDIAAFIAE 208 (453)
T ss_dssp HHHHHHHHHCCCEEEEECC----------------------------CGGGEEEECTTCHHHHHHHHHHHGGGEEEEEEC
T ss_pred HHHHHHHhhCCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCCCCHHHHHHHHHhcCCCEEEEEEC
Confidence 44441 3345788888899987653221111 11233 244556679999998886 467888888
Q ss_pred cCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCCCC-cCC-----CCCCccEEEeccccccccCCCceeeEEEee
Q 024619 147 SPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVL-SRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVK 216 (265)
Q Consensus 147 ~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~~~~~-~~~-----~~~~~di~~~s~sK~~~g~~g~~~G~v~~~ 216 (265)
+.+|++|.+.+ +++|.++|++||+++|+||+|+ +.. +.. .....|++ |++|+++ + |+++|+++++
T Consensus 209 p~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~--s~sK~l~-~-G~~~G~v~~~ 283 (453)
T 2cy8_A 209 PVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GFRVGNHGMQALLDVQPDLT--CLAKASA-G-GLPGGILGGR 283 (453)
T ss_dssp SSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTCTTHHHHHHTCCCSEE--EEEGGGG-T-TSSCEEEEEC
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-ccccCchhhhHHhCCCCcEE--EEChhhh-C-CcceEEEech
Confidence 77788998877 9999999999999999999998 332 111 12235765 7899995 3 6889999988
Q ss_pred chhH
Q 024619 217 GERL 220 (265)
Q Consensus 217 ~~~~ 220 (265)
++.+
T Consensus 284 ~~~~ 287 (453)
T 2cy8_A 284 EDVM 287 (453)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7543
No 185
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.80 E-value=2.1e-19 Score=160.45 Aligned_cols=161 Identities=12% Similarity=0.078 Sum_probs=123.7
Q ss_pred hHHHHHHHHHhHhCCCc-eEEecchH-HHHH-HHHHhcC--CCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC----
Q 024619 56 TRDALESLLAKLDKADR-ALCFTSGM-AALA-AVTHLLG--TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---- 126 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~~-~i~~~~g~-~al~-~~~~~~~--~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~---- 126 (265)
..+++++++++++|.+. ++++++|+ .++. ++..+.. +|+.|+++++.|+++. ..++..|++++.++.
T Consensus 134 ~~~~~~~~la~~~g~~~~~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~----~~~~~~G~~~~~v~~~~~~ 209 (456)
T 2z67_A 134 LTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPI----KAVSFVGMNMRLVETVLDG 209 (456)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH----HHHHHTTCEEEEECCEEET
T ss_pred HHHHHHHHHHHHcCCCCCEEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHH----HHHHHcCCCceEEEEeccC
Confidence 36779999999999874 56666667 4553 4444333 6788999999998876 344557899988875
Q ss_pred ----CCHHHHHhhc-C----CCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc-CCC-----CCCc
Q 024619 127 ----CDLDEVASAI-G----PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPL-----ELGA 191 (265)
Q Consensus 127 ----~d~~~l~~~~-~----~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~-~~~-----~~~~ 191 (265)
.|++++++++ . .++.+|+++.++||+|.+.|+++|.++|+++|+++++|++|+....+ .+. ..+.
T Consensus 210 ~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~ 289 (456)
T 2z67_A 210 DRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRV 289 (456)
T ss_dssp TEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCC
T ss_pred CCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCC
Confidence 2799999988 4 46778888999999999999999999999999999999998855442 111 1178
Q ss_pred cEEEeccccccccCCCceeeEEEeechhHHH
Q 024619 192 DIVMHSATKFIAGHSDVMAGVLAVKGERLAK 222 (265)
Q Consensus 192 di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~ 222 (265)
|+++.|++||+++|.| +|+++.+++.+..
T Consensus 290 D~~~~s~hK~~~~p~g--~G~l~~~~~~~~~ 318 (456)
T 2z67_A 290 DAVVSSSDKNLLTPIG--GGLVYSTDAEFIK 318 (456)
T ss_dssp SEEEEEHHHHHCCCSS--CEEEEESCHHHHH
T ss_pred CEEEEcCCCCcCCCCC--eEEEEEcCHHHHh
Confidence 9999999999877765 6999986554433
No 186
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.79 E-value=9.1e-19 Score=155.97 Aligned_cols=156 Identities=23% Similarity=0.187 Sum_probs=117.4
Q ss_pred HHHH-HHHHhHhCCCceEE-ecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCC--CCeEEEeecC------
Q 024619 58 DALE-SLLAKLDKADRALC-FTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNT------ 126 (265)
Q Consensus 58 ~~l~-~~l~~~~g~~~~i~-~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~--~g~~~~~~~~------ 126 (265)
++++ +++++++|.+...+ +++|++|+. ++..++++||+|++.+|+|+++.... ..... .+..++.++.
T Consensus 93 e~~a~~~la~~~g~~~~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~ 171 (447)
T 3h7f_A 93 ENLARDRAKALFGAEFANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHG-MRLNFSGKLYENGFYGVDPATHL 171 (447)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGT-CTTSHHHHSSEEEEECCCTTTCS
T ss_pred HHHHHHHHHHHcCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchh-hhhhhcCCeeEEEEcCcCcccCC
Confidence 5555 99999999997666 888998885 77888999999999999998732100 00111 2335555542
Q ss_pred CCHHHHHhhcC-CCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCC-----CcCCCCCCccEEEecccc
Q 024619 127 CDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-----LSRPLELGADIVMHSATK 200 (265)
Q Consensus 127 ~d~~~l~~~~~-~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~-----~~~~~~~~~di~~~s~sK 200 (265)
.|++++++++. .++++|++++++||++. ++++|.++|+++|+++|+||+|..+. ...+. .+.|+++.|+||
T Consensus 172 ~d~~~l~~~i~~~~~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~~s~sK 248 (447)
T 3h7f_A 172 IDMDAVRATALEFRPKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV-PHADVVSTTVHK 248 (447)
T ss_dssp CCHHHHHHHHHHHCCSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSG
T ss_pred cCHHHHHHHHHhcCCeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC-CCCcEEEecCCc
Confidence 48999999885 47889999999998876 99999999999999999999986543 22222 357999999999
Q ss_pred ccccCCCceeeEEEeechhH
Q 024619 201 FIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 201 ~~~g~~g~~~G~v~~~~~~~ 220 (265)
+++|| ++|+++.+++..
T Consensus 249 ~l~G~---~gG~i~~~~~~~ 265 (447)
T 3h7f_A 249 TLGGG---RSGLIVGKQQYA 265 (447)
T ss_dssp GGCCC---SCEEEEECGGGH
T ss_pred CCCCC---CeEEEEECHHHH
Confidence 99655 469998877443
No 187
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.79 E-value=1.3e-18 Score=163.72 Aligned_cols=156 Identities=15% Similarity=0.134 Sum_probs=125.3
Q ss_pred hhHHHHHHHHHhHhCCCceEEecchH-HHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-----
Q 024619 55 PTRDALESLLAKLDKADRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~g~-~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (265)
....+.++.+++++|.+..+++++|+ +++. ++.+++++||+|+++.++|.++...+ +..|+++++++..
T Consensus 205 g~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~----~~~G~~~v~v~~~~~~~g 280 (755)
T 2vyc_A 205 GAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGL----MLTGAKPVYMVPSRNRYG 280 (755)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHH----HHHCCEEEEECCCBCTTS
T ss_pred cHHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHH----HHcCCEEEEEeCCCCccc
Confidence 35788999999999999888888886 7775 77888999999999999999887543 4468888888642
Q ss_pred ----------CHHHHHhhcCC--Cce--------EEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc---
Q 024619 128 ----------DLDEVASAIGP--WTK--------LVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS--- 184 (265)
Q Consensus 128 ----------d~~~l~~~~~~--~~~--------~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~--- 184 (265)
|++++++++.+ +++ ++++++| |++|.+.|+++|+++|+++|+++++|++|+.+...
T Consensus 281 ~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~ 359 (755)
T 2vyc_A 281 IIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPI 359 (755)
T ss_dssp CBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGG
T ss_pred cccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCcc
Confidence 78999988853 344 8999998 79999999999999999999999999999753211
Q ss_pred ----CCCCCC--ccE------EEeccccccccCCCceeeEEEeech
Q 024619 185 ----RPLELG--ADI------VMHSATKFIAGHSDVMAGVLAVKGE 218 (265)
Q Consensus 185 ----~~~~~~--~di------~~~s~sK~~~g~~g~~~G~v~~~~~ 218 (265)
.+. .+ .|+ +++|+||+++|+.+ +|+++.++.
T Consensus 360 ~~~~~~~-~g~~aD~~~~~~iv~~S~hK~L~g~~~--g~~i~~~~~ 402 (755)
T 2vyc_A 360 YADHYAM-RGEPGDHNGPTVFATHSTHKLLNALSQ--ASYIHVREG 402 (755)
T ss_dssp GTTSSSS-CSCCCCCSSBEEEEEEETTTSSSCCTT--CEEEEEECC
T ss_pred cCCcchh-cCCcCCccCCCeEEEECccccccCcCC--eeeeeecCc
Confidence 121 33 455 99999999977764 588877665
No 188
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.79 E-value=6.2e-19 Score=157.14 Aligned_cols=201 Identities=17% Similarity=0.121 Sum_probs=134.8
Q ss_pred ceeEeeccCC--CCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CChhHHHHHHHHHhHhCCC-ceEEecchHHHHH-
Q 024619 10 STLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDKAD-RALCFTSGMAALA- 84 (265)
Q Consensus 10 ~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g~~-~~i~~~~g~~al~- 84 (265)
+.++++|+++ ..++|..+|.+..+..-.... ..+ +... ..+.+.+++++++++++.+ +++++++|++|+.
T Consensus 48 g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~----~~~-~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~ggseA~~~ 122 (452)
T 3n5m_A 48 GKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQT----LSY-FPMSQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANET 122 (452)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTT----CCC-CCTTSEEHHHHHHHHHHHHHHTSCEEEEEESSHHHHHHH
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHHHh----cCC-cccccCCHHHHHHHHHHHHhCCCCceEEEeCchHHHHHH
Confidence 4678999832 388998766666654322221 112 1112 2256999999999998754 4667777789986
Q ss_pred HHHHhc-----C---CCCEEEEcCCCCCChHHHHHhhcCC---------CCeEEEeecC--------CC---------HH
Q 024619 85 AVTHLL-----G---TGEEIVAGDDLYGGTDRLLSRVTPK---------TGVVVKRVNT--------CD---------LD 130 (265)
Q Consensus 85 ~~~~~~-----~---~g~~viv~~~~~~~~~~~~~~~~~~---------~g~~~~~~~~--------~d---------~~ 130 (265)
++..+. . ++++|++.+|+|+++.......... ....+..++. .| ++
T Consensus 123 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (452)
T 3n5m_A 123 AFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVK 202 (452)
T ss_dssp HHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHH
Confidence 555554 4 7899999999998875332121110 0112233332 23 88
Q ss_pred HHHhhcC----CCceEEEEecC-CCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcC-----CCCCCccEEE
Q 024619 131 EVASAIG----PWTKLVWVESP-TNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVM 195 (265)
Q Consensus 131 ~l~~~~~----~~~~~i~~~~~-~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~-----~~~~~~di~~ 195 (265)
++++++. +++++|+++++ +| +|.+.+ +++|.++|++||+++|+||+|. .+..+. ......|++
T Consensus 203 ~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~- 280 (452)
T 3n5m_A 203 EVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDII- 280 (452)
T ss_dssp HHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEE-
T ss_pred HHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEE-
Confidence 8988886 56888999998 89 998876 9999999999999999999987 332221 112235665
Q ss_pred eccccccccCCC-ceeeEEEeechhH
Q 024619 196 HSATKFIAGHSD-VMAGVLAVKGERL 220 (265)
Q Consensus 196 ~s~sK~~~g~~g-~~~G~v~~~~~~~ 220 (265)
++||.++ . | ++.|+++++++.+
T Consensus 281 -t~sK~l~-~-G~~~ig~~~~~~~i~ 303 (452)
T 3n5m_A 281 -TMAKGIT-S-AYLPLSATAVKREIY 303 (452)
T ss_dssp -EECGGGG-T-TSSCCEEEEEEHHHH
T ss_pred -eeccccc-C-CCcceEEEEECHHHH
Confidence 5789994 4 7 8899998876543
No 189
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.79 E-value=1.6e-18 Score=154.22 Aligned_cols=203 Identities=14% Similarity=0.118 Sum_probs=133.5
Q ss_pred ceeEeeccC--CCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCC--CceEEecchHHHHH-
Q 024619 10 STLLMNFSN--EFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA--DRALCFTSGMAALA- 84 (265)
Q Consensus 10 ~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~--~~~i~~~~g~~al~- 84 (265)
+..+++|++ +..++|..++.+..+..-.... .....+.....+...++++.++++++. +.++++++|++|+.
T Consensus 49 g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~ 125 (449)
T 3a8u_X 49 GRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLST---LDYSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALT 125 (449)
T ss_dssp CCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTT---CSCCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHH
T ss_pred CCEEEECCccHhhccCCCCCHHHHHHHHHHHHh---CCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHH
Confidence 356788852 2256887755555554322221 110111122335689999999999854 45777777889986
Q ss_pred HHHHhcC--------CCCEEEEcCCCCCChHHHHHhhcC-----------CCCeEEEeecC--------CC--------H
Q 024619 85 AVTHLLG--------TGEEIVAGDDLYGGTDRLLSRVTP-----------KTGVVVKRVNT--------CD--------L 129 (265)
Q Consensus 85 ~~~~~~~--------~g~~viv~~~~~~~~~~~~~~~~~-----------~~g~~~~~~~~--------~d--------~ 129 (265)
++..+.. +||+|++.+|.|+++......... ..++..+.++. .| +
T Consensus 126 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~ 205 (449)
T 3a8u_X 126 AVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALA 205 (449)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHH
Confidence 5554443 679999999999876432212221 12455555442 15 8
Q ss_pred HHHHhhcC----CCceEEEEecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcCC-----CCCCccEEE
Q 024619 130 DEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVM 195 (265)
Q Consensus 130 ~~l~~~~~----~~~~~i~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~~-----~~~~~di~~ 195 (265)
+++++++. +++++|++++.+|++|.+.+ +++|.++|++||+++|+||+|. .+..+.. .....|++
T Consensus 206 ~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~- 284 (449)
T 3a8u_X 206 DELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM- 284 (449)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE-
T ss_pred HHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE-
Confidence 88888886 46778887777788998887 9999999999999999999994 5533221 12235765
Q ss_pred eccccccccCCC-ceeeEEEeechh
Q 024619 196 HSATKFIAGHSD-VMAGVLAVKGER 219 (265)
Q Consensus 196 ~s~sK~~~g~~g-~~~G~v~~~~~~ 219 (265)
|+||++++ | ++.|+++++++.
T Consensus 285 -s~sK~l~~--G~~~~G~~~~~~~~ 306 (449)
T 3a8u_X 285 -CIAKQVTN--GAIPMGAVIASTEI 306 (449)
T ss_dssp -EECGGGGT--TSSCCEEEEEEHHH
T ss_pred -EEcccccC--CCCceEEEEECHHH
Confidence 78899953 5 788999887643
No 190
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.79 E-value=3.2e-19 Score=157.91 Aligned_cols=229 Identities=10% Similarity=0.017 Sum_probs=136.5
Q ss_pred ceeEeeccCC--CCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CC-hhHHHHHHHHHhHhCC--CceEEecchHHHH
Q 024619 10 STLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GN-PTRDALESLLAKLDKA--DRALCFTSGMAAL 83 (265)
Q Consensus 10 ~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~-~~~~~l~~~l~~~~g~--~~~i~~~~g~~al 83 (265)
+.++++|+++ .+++|..+|.+..+..-.... .. .|... +. +.+++++++++++++. +.++++++|++|+
T Consensus 28 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~----~~-~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~ 102 (430)
T 3i4j_A 28 GRRYLDGSSGALVANIGHGRAEVGERMAAQAAR----LP-FVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEAT 102 (430)
T ss_dssp SCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHH----CC-CCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHH
T ss_pred CCEEEECCCchhccccCCCCHHHHHHHHHHHHh----cc-cccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHH
Confidence 4578999843 678998766555554322111 11 23322 22 4699999999999864 4677777788998
Q ss_pred H-HHHHhc--------CCCCEEEEcCCCCCChHHHHHhhcCCCC---------e--EEEeecCC--------CHHHHHhh
Q 024619 84 A-AVTHLL--------GTGEEIVAGDDLYGGTDRLLSRVTPKTG---------V--VVKRVNTC--------DLDEVASA 135 (265)
Q Consensus 84 ~-~~~~~~--------~~g~~viv~~~~~~~~~~~~~~~~~~~g---------~--~~~~~~~~--------d~~~l~~~ 135 (265)
. ++..+. .+++.|++.+|.|+++............ . .+..++.+ |+++++++
T Consensus 103 ~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~ 182 (430)
T 3i4j_A 103 ESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRAL 182 (430)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHH
Confidence 6 555554 4478999999999887632211111000 0 22233333 34777777
Q ss_pred cC----CCceEEEEecCCC-Ccccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcC-----CC-CCCccEEEeccc
Q 024619 136 IG----PWTKLVWVESPTN-PRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR-----PL-ELGADIVMHSAT 199 (265)
Q Consensus 136 ~~----~~~~~i~~~~~~n-p~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~-----~~-~~~~di~~~s~s 199 (265)
+. +++++|++++++| ++|.+.+ +++|.++|++||+++|+||+|. .+..+. .. ....|++ ++|
T Consensus 183 l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~--t~s 260 (430)
T 3i4j_A 183 LEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIA--VLG 260 (430)
T ss_dssp HHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEE--EEC
T ss_pred HHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEE--EEc
Confidence 75 4567788888888 8998766 9999999999999999999997 322221 11 2235555 578
Q ss_pred cccccCCC-ceeeEEEeechhHHHHHHHH----HHhccCCCChhHHHHHHhccC
Q 024619 200 KFIAGHSD-VMAGVLAVKGERLAKELYFL----QNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 200 K~~~g~~g-~~~G~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~ 248 (265)
|.++ . | ++.|+++++++.+ +.+... ........++..+...+..|+
T Consensus 261 K~l~-~-G~~r~G~~~~~~~i~-~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 311 (430)
T 3i4j_A 261 KGLA-A-GYAPLAGLLAAPQVY-ETVMGGSGAFMHGFTYAGHPVSVAAGLSVLD 311 (430)
T ss_dssp GGGT-T-TSSCCEEEEECHHHH-HHHHHTTCBCCCCCTTTTCHHHHHHHHHHHH
T ss_pred cccc-C-CccccEEEEECHHHH-HHHhccCCcccccCCCCCCHHHHHHHHHHHH
Confidence 9995 3 8 8999998866543 433321 122333455555554444443
No 191
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.79 E-value=1.9e-18 Score=160.44 Aligned_cols=155 Identities=17% Similarity=0.178 Sum_probs=124.9
Q ss_pred hhHHHHHHHHHhHhCCCceEEecchH-HHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-----
Q 024619 55 PTRDALESLLAKLDKADRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~g~-~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (265)
....++++.+++++|++..+++++|+ +|+. ++.+++++||+|++++++|.++... +...|+++++++..
T Consensus 195 g~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~----l~lsGa~pv~v~~~~~~~g 270 (715)
T 3n75_A 195 GPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHL----MMMSDVTPIYFRPTRNAYG 270 (715)
T ss_dssp THHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH----HHHSCCEEEEECCCBCTTC
T ss_pred HHHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHH----HHHcCCEEEEEeccccccc
Confidence 35899999999999999999999996 7874 7888999999999999999998743 45678999888742
Q ss_pred ----------CHHHHHhhcC--CCce---EEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCC-c------C
Q 024619 128 ----------DLDEVASAIG--PWTK---LVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL-S------R 185 (265)
Q Consensus 128 ----------d~~~l~~~~~--~~~~---~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~-~------~ 185 (265)
|++++++++. ++++ ++++++| |++|.+.|+++|.++|++++ +++||+|+.+.. . .
T Consensus 271 i~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~~~~ 347 (715)
T 3n75_A 271 ILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKC 347 (715)
T ss_dssp CBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGTTSS
T ss_pred cccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccccCCcccccc
Confidence 7899999886 3344 8999999 99999999999999998763 799999986641 1 1
Q ss_pred CCCCC--ccEE---EeccccccccCCCceeeEEEeech
Q 024619 186 PLELG--ADIV---MHSATKFIAGHSDVMAGVLAVKGE 218 (265)
Q Consensus 186 ~~~~~--~di~---~~s~sK~~~g~~g~~~G~v~~~~~ 218 (265)
....+ .|++ ++|+||+++|+.+ +|++.+++.
T Consensus 348 al~~g~~aD~vii~~~S~hKtL~gltq--gs~i~v~~~ 383 (715)
T 3n75_A 348 GMSGGRVEGKVIYETQSTHKLLAAFSQ--ASMIHVKGD 383 (715)
T ss_dssp TTSSSCCTTCEEEEEECHHHHSSCCTT--CEEEEEESC
T ss_pred ccccCcCCCEEEEEEecccccccCCCC--eeEEEeCch
Confidence 22222 5655 9999999977643 688888765
No 192
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.78 E-value=1.7e-18 Score=153.14 Aligned_cols=203 Identities=14% Similarity=0.091 Sum_probs=131.2
Q ss_pred eeEeeccCCC--CCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhC--CCceEEecchHHHHH-H
Q 024619 11 TLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALA-A 85 (265)
Q Consensus 11 ~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g--~~~~i~~~~g~~al~-~ 85 (265)
..+++|++.. .++|..+|.+..+..-.... . ..+.++....+...++++.++++++ .+.++++++|++|+. +
T Consensus 43 ~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~-~--~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~a 119 (429)
T 1s0a_A 43 RRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDA-M--SHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVA 119 (429)
T ss_dssp CEEEESSTTTTTCTTCBSCHHHHHHHHHHHHH-C--SCCCCSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHH
T ss_pred CEEEEcCccHhhccCCCCCHHHHHHHHHHHHh-c--ccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHH
Confidence 4678887322 46786544454443322111 0 1111111133568889999999995 446777777789986 4
Q ss_pred HHHhc---C----CCCEEEEcCCCCCChHHHHHhhcC------------CCCeEEEeecC---------CCHHHHHhhcC
Q 024619 86 VTHLL---G----TGEEIVAGDDLYGGTDRLLSRVTP------------KTGVVVKRVNT---------CDLDEVASAIG 137 (265)
Q Consensus 86 ~~~~~---~----~g~~viv~~~~~~~~~~~~~~~~~------------~~g~~~~~~~~---------~d~~~l~~~~~ 137 (265)
+..+. + +|++|++.+|.|+++......... ..+...+.++. .|++++++++.
T Consensus 120 i~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 199 (429)
T 1s0a_A 120 MKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMA 199 (429)
T ss_dssp HHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHH
T ss_pred HHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHH
Confidence 44332 2 689999999999876533212111 11345555542 36888888876
Q ss_pred ---CCceEEEEecC-CCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcC-----CCCCCccEEEeccccccc
Q 024619 138 ---PWTKLVWVESP-TNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIA 203 (265)
Q Consensus 138 ---~~~~~i~~~~~-~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~-----~~~~~~di~~~s~sK~~~ 203 (265)
+++++|+++++ +||||.+.+ +++|.++|++||+++|+||+|+ .+..+. ......|++ |+||+++
T Consensus 200 ~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~l~ 277 (429)
T 1s0a_A 200 AHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDIL--CLGKALT 277 (429)
T ss_dssp HHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG
T ss_pred hCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEE--Eeccccc
Confidence 46777777777 799998766 9999999999999999999997 332221 112345665 6789985
Q ss_pred cCCC-ceeeEEEeechhH
Q 024619 204 GHSD-VMAGVLAVKGERL 220 (265)
Q Consensus 204 g~~g-~~~G~v~~~~~~~ 220 (265)
+ | +++|+++++++.+
T Consensus 278 ~--G~~~iG~~~~~~~~~ 293 (429)
T 1s0a_A 278 G--GTMTLSATLTTREVA 293 (429)
T ss_dssp T--SSSCCEEEEECHHHH
T ss_pred C--CCccceEEEeCHHHH
Confidence 3 6 7889998876443
No 193
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.78 E-value=1.6e-18 Score=152.88 Aligned_cols=201 Identities=13% Similarity=0.041 Sum_probs=131.5
Q ss_pred EeeccCCCCC---CCCCCCCeeeccccccCC-CCCCCCCccCCC-CChh-HHHHHHHHHhHhCCC---ceEEecchHHHH
Q 024619 13 LMNFSNEFDP---YGALSTPLYQTATFKQPS-ATENGPYDYTRS-GNPT-RDALESLLAKLDKAD---RALCFTSGMAAL 83 (265)
Q Consensus 13 ~~~~~~~~~~---~g~~~~~~~~~~~~~~~~-~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~g~~---~~i~~~~g~~al 83 (265)
-||++ ..-| .| .+|+++....+... ...+....|.+. |.|. ++++.+.+....... ..+.+.+|+.|+
T Consensus 46 kinLg-vG~y~d~~g--~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~ 122 (420)
T 4h51_A 46 KANLV-IGAYRDEQG--RPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGTGAV 122 (420)
T ss_dssp CEECC-SCCCBCTTS--CBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHC---CGGGEEEEEEEHHHHHH
T ss_pred CEEee-cCcccCCCC--CCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHhcCCCccccccceeeecCchHHH
Confidence 68888 5433 33 34444433211111 122334579988 9985 777777664322222 233345566665
Q ss_pred H-HH----HHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEE-eecC-------CCHHHHHhhc---CCCceEEEEec
Q 024619 84 A-AV----THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVK-RVNT-------CDLDEVASAI---GPWTKLVWVES 147 (265)
Q Consensus 84 ~-~~----~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~-~~~~-------~d~~~l~~~~---~~~~~~i~~~~ 147 (265)
. ++ ..+.+|||+|++++|+|+.+...+ +..|.+.+ ..+. .|.+.+.+.+ .++++++++++
T Consensus 123 ~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~----~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~ 198 (420)
T 4h51_A 123 SLGAKLLTRVFDAETTPIYLSDPTWPNHYGVV----KAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQC 198 (420)
T ss_dssp HHHHHHHTTTSCTTTSCEEEEESCCTHHHHHH----HHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESS
T ss_pred HHHHHHHHHhcCCCCCEEEEecCCchhHHHHH----HHcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCC
Confidence 3 22 234679999999999999997444 55665432 2221 1566666554 46788889999
Q ss_pred CCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCCCCcCC-----------CCCCccEEEeccccccccCCCceeeEE
Q 024619 148 PTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSRP-----------LELGADIVMHSATKFIAGHSDVMAGVL 213 (265)
Q Consensus 148 ~~np~G~~~~---l~~i~~~a~~~~~~li~D~~~~~~~~~~~-----------~~~~~di~~~s~sK~~~g~~g~~~G~v 213 (265)
||||||...+ +++|+++|+++++++++|++|....++.. ......+++.|+||.+ +..|+|+|++
T Consensus 199 p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~-~~~G~RvG~~ 277 (420)
T 4h51_A 199 AHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNM-GLYSERAGTL 277 (420)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTS-CCGGGCEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEecccccc-ccccCceEEE
Confidence 9999999964 78999999999999999999975544311 1223568999999999 7789999999
Q ss_pred EeechhHH
Q 024619 214 AVKGERLA 221 (265)
Q Consensus 214 ~~~~~~~~ 221 (265)
++......
T Consensus 278 ~~~~~~~~ 285 (420)
T 4h51_A 278 SLLLKDKT 285 (420)
T ss_dssp EEECSCHH
T ss_pred EecccCHH
Confidence 88765443
No 194
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.78 E-value=4.9e-19 Score=156.98 Aligned_cols=201 Identities=15% Similarity=0.153 Sum_probs=134.8
Q ss_pred ceeEeeccCCC--CCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHh-CCCceEEecchHHHHH-H
Q 024619 10 STLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALA-A 85 (265)
Q Consensus 10 ~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-g~~~~i~~~~g~~al~-~ 85 (265)
+..+++|++.. .++|..+|.+..+..-.... ...+.| ..+...++++++++++ +.+.++++++|++|+. +
T Consensus 55 g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~---~~~~~~---~~~~~~~l~~~la~~~~~~~~v~~~~sgseA~~~a 128 (434)
T 2epj_A 55 GARIVDLVLAYGPLILGHKHPRVLEAVEEALAR---GWLYGA---PGEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTA 128 (434)
T ss_dssp CCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHT---CSCCSS---CCHHHHHHHHHHHHHHCTTCEEEEESSHHHHHHHH
T ss_pred CCEEEEcccchhcccCCCCCHHHHHHHHHHHHh---CCCCCC---CCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHH
Confidence 35688997322 57888444444443222111 111222 3356889999999999 7777888888999986 4
Q ss_pred HHH--hcCCCCEEEEcCCCCCChHHHHHhhc----------CCCCe------EEEeecCCCHHHHHhhcC---CCceEEE
Q 024619 86 VTH--LLGTGEEIVAGDDLYGGTDRLLSRVT----------PKTGV------VVKRVNTCDLDEVASAIG---PWTKLVW 144 (265)
Q Consensus 86 ~~~--~~~~g~~viv~~~~~~~~~~~~~~~~----------~~~g~------~~~~~~~~d~~~l~~~~~---~~~~~i~ 144 (265)
+.. .+.+++.|++.+++|+++........ ...|+ ++..++..|++++++++. +++++|+
T Consensus 129 l~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi 208 (434)
T 2epj_A 129 IRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPYNDVEALERVFAEYGDRIAGVI 208 (434)
T ss_dssp HHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEE
T ss_pred HHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCCCCHHHHHHHHHhCCCCEEEEE
Confidence 443 14456788888899987642110000 11233 355666679999998886 3678888
Q ss_pred EecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCCCCcCC-----CCCCccEEEeccccccccCCCceeeEEEe
Q 024619 145 VESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAV 215 (265)
Q Consensus 145 ~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~~~~~~~~-----~~~~~di~~~s~sK~~~g~~g~~~G~v~~ 215 (265)
+++.++++|.+.+ +++|.++|++||+++|+||+|+....+.. .....|++ |+||+++ + |+++|++++
T Consensus 209 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~--s~sK~l~-~-G~~~G~v~~ 284 (434)
T 2epj_A 209 VEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLGLEGAQGYFNIEGDII--VLGKIIG-G-GFPVGAVAG 284 (434)
T ss_dssp ECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSSTTHHHHHHTCCCSEE--EEEGGGG-T-TSSCEEEEE
T ss_pred EeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCCcchhhHHhCCCCCee--eecchhc-C-Ccceeeeee
Confidence 8888888999887 99999999999999999999982211111 12246764 7899995 4 688999998
Q ss_pred echhH
Q 024619 216 KGERL 220 (265)
Q Consensus 216 ~~~~~ 220 (265)
+++.+
T Consensus 285 ~~~~~ 289 (434)
T 2epj_A 285 SREVM 289 (434)
T ss_dssp CHHHH
T ss_pred cHHHH
Confidence 76443
No 195
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.78 E-value=2.5e-19 Score=158.84 Aligned_cols=199 Identities=17% Similarity=0.186 Sum_probs=133.9
Q ss_pred cceeEeeccCCC--CCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHh-CCCceEEecchHHHHH-
Q 024619 9 VSTLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALA- 84 (265)
Q Consensus 9 ~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-g~~~~i~~~~g~~al~- 84 (265)
.+.++++|+++. ..+|..+|.+..+..-.... ...+.| ..+...++++++++++ +.+.++++++|++|+.
T Consensus 53 ~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~---~~~~~~---~~~~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ 126 (434)
T 3l44_A 53 DGNKYIDYLAAYGPIITGHAHPHITKAITTAAEN---GVLYGT---PTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMT 126 (434)
T ss_dssp TCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHH---CSCCSS---CCHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHH
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHh---CcCCCC---CCHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHH
Confidence 346789997432 56888665555543322111 111112 2356888999999988 4556888888899986
Q ss_pred HHHHhcC--CCCEEEEcCCCCCChHHHHHhhcCCCCe-------------------EEEeecCCCHHHHHhhcC---CCc
Q 024619 85 AVTHLLG--TGEEIVAGDDLYGGTDRLLSRVTPKTGV-------------------VVKRVNTCDLDEVASAIG---PWT 140 (265)
Q Consensus 85 ~~~~~~~--~g~~viv~~~~~~~~~~~~~~~~~~~g~-------------------~~~~~~~~d~~~l~~~~~---~~~ 140 (265)
++..+.. ++++|++.+|+|+.+... .....|. ++..++..|++++++++. +++
T Consensus 127 ai~~a~~~~~~~~vi~~~~~yhg~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 203 (434)
T 3l44_A 127 TIRVARAYTGRTKIMKFAGCYHGHSDL---VLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEV 203 (434)
T ss_dssp HHHHHHHHHCCCEEEEETTCCCCSSGG---GGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGE
T ss_pred HHHHHHHhhCCCEEEEEcCccCCCcHH---HHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCE
Confidence 5544433 678999999999876421 1111111 345566668999998886 467
Q ss_pred eEEEEecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCCCCcC-----CCCCCccEEEeccccccccCCCceee
Q 024619 141 KLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLSR-----PLELGADIVMHSATKFIAGHSDVMAG 211 (265)
Q Consensus 141 ~~i~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~~~~~~~-----~~~~~~di~~~s~sK~~~g~~g~~~G 211 (265)
++|++++++|++|.+.+ +++|.++|++||+++|+||+|.....+. ......|++ |+||.++ +|++.|
T Consensus 204 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g~~~~~~~~~~~~di~--t~sK~~~--~G~~iG 279 (434)
T 3l44_A 204 AAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFMYGGAQDLLGVTPDLT--ALGKVIG--GGLPIG 279 (434)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSSSSCHHHHHTCCCSEE--EEEGGGG--TTSSCE
T ss_pred EEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceeccccHHHHHcCCCCCee--ehhhhhc--CCcCee
Confidence 88888888888888876 9999999999999999999997321111 112235654 6899995 468999
Q ss_pred EEEeechhH
Q 024619 212 VLAVKGERL 220 (265)
Q Consensus 212 ~v~~~~~~~ 220 (265)
+++++++.+
T Consensus 280 ~~~~~~~i~ 288 (434)
T 3l44_A 280 AYGGKKEIM 288 (434)
T ss_dssp EEEECHHHH
T ss_pred eEEEcHHHH
Confidence 998776543
No 196
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.78 E-value=5.8e-19 Score=156.10 Aligned_cols=201 Identities=14% Similarity=0.183 Sum_probs=134.1
Q ss_pred ceeEeeccCCC--CCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhC-CCceEEecchHHHHH-H
Q 024619 10 STLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK-ADRALCFTSGMAALA-A 85 (265)
Q Consensus 10 ~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g-~~~~i~~~~g~~al~-~ 85 (265)
+.++++|+++. ..+|..+|.+..+..-.... ...+.| ..+.+.+++++++++++ .+.++++++|++|+. +
T Consensus 51 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~---~~~~~~---~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~a 124 (427)
T 3fq8_A 51 GNRYIDYVGTWGPAICGHAHPEVIEALKVAMEK---GTSFGA---PCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAV 124 (427)
T ss_dssp SCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTT---CSCCSS---CCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHH
T ss_pred CCEEEECCCchhhhccCCCCHHHHHHHHHHHHh---CCCcCC---CCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHH
Confidence 46789997432 56888666555554322221 112222 34679999999999985 456777788889986 4
Q ss_pred HHH--hcCCCCEEEEcCCCCCChHHHHHhh----------cCCCCe------EEEeecCCCHHHHHhhcCC---CceEEE
Q 024619 86 VTH--LLGTGEEIVAGDDLYGGTDRLLSRV----------TPKTGV------VVKRVNTCDLDEVASAIGP---WTKLVW 144 (265)
Q Consensus 86 ~~~--~~~~g~~viv~~~~~~~~~~~~~~~----------~~~~g~------~~~~~~~~d~~~l~~~~~~---~~~~i~ 144 (265)
+.. ....++.|++.+++|+++....... ....+. .+..++..|++++++++.+ ++++|+
T Consensus 125 l~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi 204 (427)
T 3fq8_A 125 LRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVI 204 (427)
T ss_dssp HHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEE
T ss_pred HHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEE
Confidence 422 2234578999899998753111000 001111 2455666689999988864 688999
Q ss_pred EecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCCCCc-----CCCCCCccEEEeccccccccCCCceeeEEEe
Q 024619 145 VESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAV 215 (265)
Q Consensus 145 ~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~ 215 (265)
+++++|++|.+.+ +++|.++|++||+++|+||+|+....+ .......|+ .|+||.++ +|+++|++++
T Consensus 205 ~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di--~t~sK~~~--~G~~~G~~~~ 280 (427)
T 3fq8_A 205 LEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIAYGGVQEKFGVTPDL--TTLGKIIG--GGLPVGAYGG 280 (427)
T ss_dssp ECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBTTHHHHHTTCCCSE--EEECGGGG--TTSSCEEEEE
T ss_pred EcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchhhHhcCCCCCh--hhhhhhhh--CCcceEEEEE
Confidence 9999999999988 999999999999999999999722111 111223565 47789995 4789999988
Q ss_pred echhH
Q 024619 216 KGERL 220 (265)
Q Consensus 216 ~~~~~ 220 (265)
+++.+
T Consensus 281 ~~~~~ 285 (427)
T 3fq8_A 281 KREIM 285 (427)
T ss_dssp CHHHH
T ss_pred cHHHH
Confidence 66543
No 197
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.78 E-value=1.4e-18 Score=155.18 Aligned_cols=231 Identities=14% Similarity=0.058 Sum_probs=147.4
Q ss_pred ceeEeeccCC--CCCCCCCCCCeeeccccccCCCCCCCCCccCCC--CChhHHHHHHHHHhHhC--CCceEEecchHHHH
Q 024619 10 STLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS--GNPTRDALESLLAKLDK--ADRALCFTSGMAAL 83 (265)
Q Consensus 10 ~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~--g~~~~~~l~~~l~~~~g--~~~~i~~~~g~~al 83 (265)
+.++++|+++ ...+|..+|.+..+..-+... ..+.|+.. ..+.+.+++++++++++ .+.++++++|++|+
T Consensus 49 g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~----~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~ 124 (459)
T 4a6r_A 49 GNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEE----LPFYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESV 124 (459)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHH----CSCCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHH
T ss_pred CCEEEECCCchhcccCCCCCHHHHHHHHHHHHh----ccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHH
Confidence 4678999843 577888766666554322211 12223332 34679999999999985 45677778888998
Q ss_pred H-HHHHhcC--------CCCEEEEcCCCCCChHHHHHhhcC-----------CCCeEEEeecC----C---C--------
Q 024619 84 A-AVTHLLG--------TGEEIVAGDDLYGGTDRLLSRVTP-----------KTGVVVKRVNT----C---D-------- 128 (265)
Q Consensus 84 ~-~~~~~~~--------~g~~viv~~~~~~~~~~~~~~~~~-----------~~g~~~~~~~~----~---d-------- 128 (265)
. ++..+.+ +++.|++.+|+|+++......... ..+...+.++. . |
T Consensus 125 ~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~ 204 (459)
T 4a6r_A 125 DTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVA 204 (459)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcccCHHHHHHHH
Confidence 6 5555554 578999999999987644322211 11334443332 1 2
Q ss_pred HHHHHhhcC----CCceEEEEecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcCC-----CCCCccEE
Q 024619 129 LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIV 194 (265)
Q Consensus 129 ~~~l~~~~~----~~~~~i~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~~-----~~~~~di~ 194 (265)
++++++.+. +++++|+++++++++|.+.+ +++|.++|++||+++|+||+|. .+..+.. .....|++
T Consensus 205 ~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~ 284 (459)
T 4a6r_A 205 ARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLF 284 (459)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE
T ss_pred HHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee
Confidence 677887775 45778888888888888766 9999999999999999999987 3332211 12345666
Q ss_pred EeccccccccCCCceeeEEEeechhHHHHHH---HHHHhccCCCChhHHHHHHhccC
Q 024619 195 MHSATKFIAGHSDVMAGVLAVKGERLAKELY---FLQNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 195 ~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~ 248 (265)
++||.+ +.++++.|+++++++.+ +.+. ..........++..++..+..|+
T Consensus 285 --t~sK~l-~gg~~~lg~v~~~~~i~-~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 337 (459)
T 4a6r_A 285 --TAAKGL-SSGYLPIGAVFVGKRVA-EGLIAGGDFNHGFTYSGHPVCAAVAHANVA 337 (459)
T ss_dssp --EECGGG-GTTSSCCEEEEECHHHH-HHHHHHCTTHHHHHHCSCHHHHHHHHHHHH
T ss_pred --ehhhhh-cCCCCCccceeeCHHHH-HHhhcCCCcccCCCCCCCHHHHHHHHHHHH
Confidence 578998 44557899998876543 4333 22222334455555555444443
No 198
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.78 E-value=2.3e-18 Score=154.46 Aligned_cols=154 Identities=19% Similarity=0.181 Sum_probs=103.5
Q ss_pred HHHHHHHhHhCCCc----eE-EecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHH----hhcCCCCeE--EEeec-
Q 024619 59 ALESLLAKLDKADR----AL-CFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLS----RVTPKTGVV--VKRVN- 125 (265)
Q Consensus 59 ~l~~~l~~~~g~~~----~i-~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~----~~~~~~g~~--~~~~~- 125 (265)
..++++++++|.+. .. +++||++|+. ++.++++|||+|++.++.|.++..... ..+...|.. ++.++
T Consensus 104 ~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~v 183 (490)
T 2a7v_A 104 LCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKL 183 (490)
T ss_dssp HHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCB
T ss_pred HHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccc
Confidence 34499999999985 33 4458898885 788899999999999998876432110 012233433 33333
Q ss_pred -----CCCHHHHHhhcC-CCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCC-----cCCCCCCccEE
Q 024619 126 -----TCDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIV 194 (265)
Q Consensus 126 -----~~d~~~l~~~~~-~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~-----~~~~~~~~di~ 194 (265)
..|++++++++. .++++|+++.++|| ...|+++|.++|+++|+++++|++|..|.. ..+.. +.|++
T Consensus 184 d~~~~~iD~d~le~~l~~~~~klIi~~~s~~~--~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~-~aDiv 260 (490)
T 2a7v_A 184 NPKTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK-HADIV 260 (490)
T ss_dssp CTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG-TCSEE
T ss_pred ccccCCcCHHHHHHHHhhcCCcEEEEcCCCCC--CcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC-CCCEE
Confidence 238999999885 47889998888886 467999999999999999999999875432 33433 68999
Q ss_pred EeccccccccCCCceeeEEEeech
Q 024619 195 MHSATKFIAGHSDVMAGVLAVKGE 218 (265)
Q Consensus 195 ~~s~sK~~~g~~g~~~G~v~~~~~ 218 (265)
++|+||+++||. +|++++++.
T Consensus 261 ~~S~hK~l~Gp~---GG~i~~~~~ 281 (490)
T 2a7v_A 261 TTTTHKTLRGAR---SGLIFYRKG 281 (490)
T ss_dssp EEESSGGGCSCS---CEEEEEECS
T ss_pred EECCcccCcccc---chheeeccc
Confidence 999999997765 599988874
No 199
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.77 E-value=1e-18 Score=157.12 Aligned_cols=156 Identities=19% Similarity=0.154 Sum_probs=121.3
Q ss_pred HHHHHHHHHhHhCCCc-----eEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHh----hcCCCC--eEEEee
Q 024619 57 RDALESLLAKLDKADR-----ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSR----VTPKTG--VVVKRV 124 (265)
Q Consensus 57 ~~~l~~~l~~~~g~~~-----~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~----~~~~~g--~~~~~~ 124 (265)
.+.+++++++++|.+. .+++++|++++. ++.++++|||+|+++++.|+++...+.. .++..| .+++.+
T Consensus 92 e~~~~~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~ 171 (483)
T 1rv3_A 92 ETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAY 171 (483)
T ss_dssp HHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEE
T ss_pred HHHHHHHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEEC
Confidence 4566699999999872 388999997775 5888899999999999999887532210 112223 455555
Q ss_pred cC------CCHHHHHhhcC-CCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc-----CCCCCCcc
Q 024619 125 NT------CDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGAD 192 (265)
Q Consensus 125 ~~------~d~~~l~~~~~-~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~-----~~~~~~~d 192 (265)
++ .|++++++++. +++++|++ +++|++ .+.|+++|.++|+++|+++++|++|+.|... .+.. +.|
T Consensus 172 ~~~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~-~~d 248 (483)
T 1rv3_A 172 KVNPDTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE-HCH 248 (483)
T ss_dssp CBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG-TCS
T ss_pred ccccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC-CCc
Confidence 32 38999999998 78999999 888988 8899999999999999999999999865432 2222 589
Q ss_pred EEEeccccccccCCCceeeEEEeech
Q 024619 193 IVMHSATKFIAGHSDVMAGVLAVKGE 218 (265)
Q Consensus 193 i~~~s~sK~~~g~~g~~~G~v~~~~~ 218 (265)
++++|+||++.||. +|+++++++
T Consensus 249 iv~~s~~K~l~Gpr---gG~i~~~~~ 271 (483)
T 1rv3_A 249 VVTTTTHKTLRGCR---AGMIFYRRG 271 (483)
T ss_dssp EEEEESSGGGCCCS---CEEEEEECS
T ss_pred EEEecCcccCCCCC---ceEEEEcch
Confidence 99999999997664 599998875
No 200
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.77 E-value=1.7e-18 Score=154.76 Aligned_cols=205 Identities=12% Similarity=0.050 Sum_probs=136.3
Q ss_pred cceeEeeccCC--CCCCCCCCCCeeeccccccCCCCCCCCCccCCC-C-ChhHHHHHHHHHhHhCC--CceEEecchHHH
Q 024619 9 VSTLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-G-NPTRDALESLLAKLDKA--DRALCFTSGMAA 82 (265)
Q Consensus 9 ~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g-~~~~~~l~~~l~~~~g~--~~~i~~~~g~~a 82 (265)
.+.++++|+++ ..++|..+|.+..+..-+... ..+.|+.. + .+.+.+++++++++++. +.++++++|++|
T Consensus 49 ~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~----~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA 124 (460)
T 3gju_A 49 NGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKN----LAYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDA 124 (460)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHH----HSCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHH
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHh----ccccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHH
Confidence 34678999833 367888766666554322211 12233333 2 35699999999998744 467788888899
Q ss_pred HH-HHHHhc--------CCCCEEEEcCCCCCChHHHHHhhcC-----------CCCeEEEeecC----CC----------
Q 024619 83 LA-AVTHLL--------GTGEEIVAGDDLYGGTDRLLSRVTP-----------KTGVVVKRVNT----CD---------- 128 (265)
Q Consensus 83 l~-~~~~~~--------~~g~~viv~~~~~~~~~~~~~~~~~-----------~~g~~~~~~~~----~d---------- 128 (265)
+. ++..+. .+++.|++.+++|+++......... ..+...+.++. ++
T Consensus 125 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 204 (460)
T 3gju_A 125 NETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQ 204 (460)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHH
Confidence 86 555554 2468999999999887644322211 11334443332 22
Q ss_pred --HHHHHhhcC----CCceEEEEecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcCC-----CCCCcc
Q 024619 129 --LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGAD 192 (265)
Q Consensus 129 --~~~l~~~~~----~~~~~i~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~~-----~~~~~d 192 (265)
++++++++. +++++|++++++|++|.+.+ +++|.++|++||+++|+||+|. .+..+.. .....|
T Consensus 205 ~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pd 284 (460)
T 3gju_A 205 HCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPD 284 (460)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCS
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCC
Confidence 578888775 56788999998898888755 9999999999999999999997 3333211 122456
Q ss_pred EEEeccccccccCCCceeeEEEeechhH
Q 024619 193 IVMHSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 193 i~~~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
++ ++||.+++ ++++.|+++++++.+
T Consensus 285 i~--t~sK~l~g-G~~~lg~v~~~~~i~ 309 (460)
T 3gju_A 285 LI--TIAKGLTS-AYAPLSGVIVADRVW 309 (460)
T ss_dssp EE--EECGGGTT-TSSCCEEEEEEHHHH
T ss_pred ee--eeehhhcC-CCCCeEEEEECHHHH
Confidence 65 57899854 336889998877544
No 201
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.77 E-value=6e-18 Score=151.15 Aligned_cols=168 Identities=18% Similarity=0.186 Sum_probs=121.7
Q ss_pred ccCCCCChhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHhcC----CCCE---EEEcCCCCCChHHHHHhhcCCCCe
Q 024619 48 DYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLG----TGEE---IVAGDDLYGGTDRLLSRVTPKTGV 119 (265)
Q Consensus 48 ~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~~~----~g~~---viv~~~~~~~~~~~~~~~~~~~g~ 119 (265)
.|+.. +...++++.++++++.++++++++|++|+. ++..+.+ +||+ |+++.+.|..+.. .+...|.
T Consensus 71 ~y~~~--~~~~~l~~~la~~~~~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~----~~~~~g~ 144 (467)
T 1ax4_A 71 AYAGS--RNYYDLKDKAKELFNYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAA----HVELNGC 144 (467)
T ss_dssp CSSSC--HHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHH----HHHHTTC
T ss_pred ccccC--ccHHHHHHHHHHHcCCCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhH----HHhccCC
Confidence 45443 567889999999999988888888999986 6677777 9998 9988555555442 3344566
Q ss_pred EEEeecC---------------CCHHHHHhhcCC----CceEEEEecCCCCc-cccc---cHHHHHHHHHHcCCEEEEeC
Q 024619 120 VVKRVNT---------------CDLDEVASAIGP----WTKLVWVESPTNPR-QQIC---DIRKIAEMAHAHGALLLVDN 176 (265)
Q Consensus 120 ~~~~~~~---------------~d~~~l~~~~~~----~~~~i~~~~~~np~-G~~~---~l~~i~~~a~~~~~~li~D~ 176 (265)
+++.++. .|++++++++.+ ++++|++++++||+ |.+. ++++|.++|++||+++|+|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De 224 (467)
T 1ax4_A 145 KAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDS 224 (467)
T ss_dssp EEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred ceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEc
Confidence 7665421 278999998863 68999999999999 7775 47899999999999999999
Q ss_pred CcCC-----------CCCcCC-CC------CCccEEEeccccccccCCCceeeEEEeech-hHHHHH
Q 024619 177 SIMS-----------PVLSRP-LE------LGADIVMHSATKFIAGHSDVMAGVLAVKGE-RLAKEL 224 (265)
Q Consensus 177 ~~~~-----------~~~~~~-~~------~~~di~~~s~sK~~~g~~g~~~G~v~~~~~-~~~~~~ 224 (265)
++.. +..+.. .. ...|+++.|+||+++. + .+|+++.+++ .+.+.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~-~--~Gg~~~~~d~~~l~~~~ 288 (467)
T 1ax4_A 225 ARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLL-N--IGGLVAIRDNEEIFTLA 288 (467)
T ss_dssp TTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCC-S--SCEEEEESSCHHHHHHH
T ss_pred hhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCC-C--cceEEEeCCHHHHHHHH
Confidence 8654 222211 11 2368889999999854 3 2478877734 444433
No 202
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.77 E-value=1.4e-18 Score=157.39 Aligned_cols=156 Identities=20% Similarity=0.167 Sum_probs=123.4
Q ss_pred HHHHHHHHHhHhCCC--ceEEecchHHHHH-HHHHhc-------C-CCC------EEEEcCCCCCChHHHHHhhcCCCCe
Q 024619 57 RDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL-------G-TGE------EIVAGDDLYGGTDRLLSRVTPKTGV 119 (265)
Q Consensus 57 ~~~l~~~l~~~~g~~--~~i~~~~g~~al~-~~~~~~-------~-~g~------~viv~~~~~~~~~~~~~~~~~~~g~ 119 (265)
.+++++++++++|.+ +.+++++|++|+. ++..+. + +|+ .|+++++.|+++...+ +..|.
T Consensus 150 e~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~----~~~g~ 225 (515)
T 2jis_A 150 EEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGA----AFLGL 225 (515)
T ss_dssp HHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHH----HHTTS
T ss_pred HHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHH----HHcCC
Confidence 677888999999986 4667777788864 444432 2 465 7889999999887554 33344
Q ss_pred ---EEEeecCC-----CHHHHHhhcCC------CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcC
Q 024619 120 ---VVKRVNTC-----DLDEVASAIGP------WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR 185 (265)
Q Consensus 120 ---~~~~~~~~-----d~~~l~~~~~~------~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~ 185 (265)
+++.++.+ |++++++++.+ ++++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+....
T Consensus 226 g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~ 305 (515)
T 2jis_A 226 GTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLS 305 (515)
T ss_dssp CGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGC
T ss_pred CCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhC
Confidence 77777764 79999998864 48899999999999999999999999999999999999998777643
Q ss_pred C-----C-C-CCccEEEeccccccccCCCceeeEEEeech
Q 024619 186 P-----L-E-LGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (265)
Q Consensus 186 ~-----~-~-~~~di~~~s~sK~~~g~~g~~~G~v~~~~~ 218 (265)
+ . . .++|++++|+|||+++|.| +|+++++++
T Consensus 306 ~~~~~~~~g~~~aD~v~~s~hK~l~~p~g--~G~l~~~~~ 343 (515)
T 2jis_A 306 QTHRHLLDGIQRADSVAWNPHKLLAAGLQ--CSALLLQDT 343 (515)
T ss_dssp TTTGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESCC
T ss_pred hhhHhhcCCCccCCEEEECcccccCCCCC--eeEEEEeCh
Confidence 2 1 2 2689999999999987766 588888876
No 203
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.77 E-value=1e-18 Score=155.71 Aligned_cols=203 Identities=15% Similarity=0.080 Sum_probs=126.4
Q ss_pred cceeEeeccCC--CCCCCCCCCCeeeccccccCCCCCCCCCccCCC-CC-hhHHHHHHHHHhHhC--CCceEEecchHHH
Q 024619 9 VSTLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GN-PTRDALESLLAKLDK--ADRALCFTSGMAA 82 (265)
Q Consensus 9 ~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~-~~~~~l~~~l~~~~g--~~~~i~~~~g~~a 82 (265)
.+.++++|.++ ..++|..+|.+.++..-.... .. .|... +. +.+.+++++++++++ .+.+++++||++|
T Consensus 42 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~----~~-~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA 116 (448)
T 3dod_A 42 NGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGK----IA-HSTLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEA 116 (448)
T ss_dssp TSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTT----CS-CCCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHH
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHh----cc-CccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHH
Confidence 34678999742 677998766665554422221 11 12222 22 568999999999984 4568888888999
Q ss_pred HH-HHHHhcC----C----CCEEEEcCCCCCChHHHHHhhcCCC---------CeEEEeecCCC----------------
Q 024619 83 LA-AVTHLLG----T----GEEIVAGDDLYGGTDRLLSRVTPKT---------GVVVKRVNTCD---------------- 128 (265)
Q Consensus 83 l~-~~~~~~~----~----g~~viv~~~~~~~~~~~~~~~~~~~---------g~~~~~~~~~d---------------- 128 (265)
+. ++..+.+ + +|+|++.+|+|+++........... ...+..++.++
T Consensus 117 ~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 196 (448)
T 3dod_A 117 MEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQC 196 (448)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHH
Confidence 86 5555543 4 4999999999987753221110000 01223333332
Q ss_pred HHHHHhhcC---CCceEEEEecCC-CCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcC-----CCCCCccEE
Q 024619 129 LDEVASAIG---PWTKLVWVESPT-NPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIV 194 (265)
Q Consensus 129 ~~~l~~~~~---~~~~~i~~~~~~-np~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~-----~~~~~~di~ 194 (265)
++++++++. +++++|++++++ |++|.+.+ +++|.++|++||+++|+||+|. .+..+. ......|++
T Consensus 197 ~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~ 276 (448)
T 3dod_A 197 LRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLM 276 (448)
T ss_dssp HHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE
T ss_pred HHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEE
Confidence 788888875 567889999888 99997765 9999999999999999999987 332221 112235655
Q ss_pred EeccccccccCCC-ceeeEEEeechhH
Q 024619 195 MHSATKFIAGHSD-VMAGVLAVKGERL 220 (265)
Q Consensus 195 ~~s~sK~~~g~~g-~~~G~v~~~~~~~ 220 (265)
+++|.+++ | +++|+++.+++.+
T Consensus 277 --t~sK~l~~--G~~~ig~v~~~~~~~ 299 (448)
T 3dod_A 277 --AAGKGITG--GYLPIAVTFATEDIY 299 (448)
T ss_dssp --EECGGGGT--TSSCCEEEEEEHHHH
T ss_pred --EecccccC--CcCceEEEEECHHHH
Confidence 67899953 6 5899998877543
No 204
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.77 E-value=5.7e-18 Score=152.97 Aligned_cols=157 Identities=13% Similarity=0.073 Sum_probs=125.5
Q ss_pred HHHHHHHHHhHhCCC-------ceEEecchHHHHH-HHHHhcCC--------CC-----EEEEcCCCCCChHHHHHhhcC
Q 024619 57 RDALESLLAKLDKAD-------RALCFTSGMAALA-AVTHLLGT--------GE-----EIVAGDDLYGGTDRLLSRVTP 115 (265)
Q Consensus 57 ~~~l~~~l~~~~g~~-------~~i~~~~g~~al~-~~~~~~~~--------g~-----~viv~~~~~~~~~~~~~~~~~ 115 (265)
.+++++++++++|.+ ..+++++|++++. +++++..+ |+ .|+++.+.|.++. ..++
T Consensus 97 e~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~----~~~~ 172 (502)
T 3hbx_A 97 QNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWE----KFAR 172 (502)
T ss_dssp HHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHH----HHHH
T ss_pred HHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHH----HHHH
Confidence 557788899999987 2345777788875 55555444 76 8999999998876 5556
Q ss_pred CCCeEEEeecCC------CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHc------CCEEEEeCCcCCCCC
Q 024619 116 KTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH------GALLLVDNSIMSPVL 183 (265)
Q Consensus 116 ~~g~~~~~~~~~------d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~------~~~li~D~~~~~~~~ 183 (265)
..|++++.++.+ |++++++++.+++++|++++++||||.+.|+++|.++|+++ |+++++|++|+.+..
T Consensus 173 ~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~ 252 (502)
T 3hbx_A 173 YFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIA 252 (502)
T ss_dssp HTTCEEEEECCBTTBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTH
T ss_pred HcCceeEEEecCCCcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhh
Confidence 678899888753 79999999999999999999999999999999999999999 999999999985431
Q ss_pred ----c----CCCCCCccEEEeccccccccCCCceeeEEEeechh
Q 024619 184 ----S----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER 219 (265)
Q Consensus 184 ----~----~~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~ 219 (265)
. .....+.|++..|++||+.+|.| +|+++.++..
T Consensus 253 p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g--~G~~~~~~~~ 294 (502)
T 3hbx_A 253 PFLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKE 294 (502)
T ss_dssp HHHCTTCCCSTTSTTEEEEEEETTTTTCCCSS--CEEEEESSGG
T ss_pred hhhCcccccccCCCCceEEEECcccccCCCCC--eEEEEEeCHH
Confidence 1 11123789999999999988877 4777776544
No 205
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.76 E-value=2.6e-18 Score=155.26 Aligned_cols=160 Identities=13% Similarity=0.056 Sum_probs=122.9
Q ss_pred HHHHHHHHHhHhCCC----ceEEecchHHHHH-HHHHhc--------CCC-----C-EEEEcCCCCCChHHHHHhhcCCC
Q 024619 57 RDALESLLAKLDKAD----RALCFTSGMAALA-AVTHLL--------GTG-----E-EIVAGDDLYGGTDRLLSRVTPKT 117 (265)
Q Consensus 57 ~~~l~~~l~~~~g~~----~~i~~~~g~~al~-~~~~~~--------~~g-----~-~viv~~~~~~~~~~~~~~~~~~~ 117 (265)
.+++.+++++++|.+ ..+++++|++|+. ++..+. ++| + .|+++.+.|+++...+. ... .
T Consensus 134 e~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~-~~g-~ 211 (504)
T 2okj_A 134 EQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGA-ALG-F 211 (504)
T ss_dssp HHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHH-HTT-S
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHH-HcC-C
Confidence 556668889999875 4666667778875 454443 246 6 78899999999875552 222 1
Q ss_pred Ce-EEEeecCC-----CHHHHHhhcCC------CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcC
Q 024619 118 GV-VVKRVNTC-----DLDEVASAIGP------WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR 185 (265)
Q Consensus 118 g~-~~~~~~~~-----d~~~l~~~~~~------~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~ 185 (265)
|. +++.++.+ |++++++++.+ ++++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+.+..
T Consensus 212 g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~ 291 (504)
T 2okj_A 212 GTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMS 291 (504)
T ss_dssp CGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGC
T ss_pred CcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhC
Confidence 33 77777765 89999998864 58899999999999999999999999999999999999998776531
Q ss_pred -----CCC--CCccEEEeccccccccCCCceeeEEEeechhH
Q 024619 186 -----PLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 186 -----~~~--~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
... .+.|+++.|+|||+++|.+ +|+++.+++.+
T Consensus 292 ~~~~~~~~g~~~~D~i~~~~hK~~~~p~~--~g~l~~~~~~~ 331 (504)
T 2okj_A 292 RKHRHKLNGIERANSVTWNPHKMMGVLLQ--CSAILVKEKGI 331 (504)
T ss_dssp TTTGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESSTTH
T ss_pred HhhHhhcCCcccCCEEEECchhhcCCCcc--eEEEEEECHHH
Confidence 111 2689999999999977765 69998887543
No 206
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.76 E-value=4.4e-18 Score=150.68 Aligned_cols=202 Identities=15% Similarity=0.092 Sum_probs=130.5
Q ss_pred ceeEeeccCCC--CCCCCCCCCeeeccccccCCCCCCCCCccCCC-CChhHHHHHHHHHhHhCC--CceEEecchHHHHH
Q 024619 10 STLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDKA--DRALCFTSGMAALA 84 (265)
Q Consensus 10 ~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g~--~~~i~~~~g~~al~ 84 (265)
+..+++|.+.. .++|..+|.+..+..-.... ..+ +... ..+...++++.++++++. +.++++++|++|+.
T Consensus 42 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~----~~~-~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~ 116 (433)
T 1zod_A 42 GRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGK----LDH-LFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNE 116 (433)
T ss_dssp CCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHH----CCC-CCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHH
T ss_pred CCEEEEcccchhccccCCCCHHHHHHHHHHHHh----Ccc-cccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHH
Confidence 35678885222 36787555554443322111 111 1122 235688999999999974 45667777889986
Q ss_pred -HHHHhc--CCCCEEEEcCCCCCChHHHHHhhc----------CCCCeEEEeecC------C---------CHHHHHhhc
Q 024619 85 -AVTHLL--GTGEEIVAGDDLYGGTDRLLSRVT----------PKTGVVVKRVNT------C---------DLDEVASAI 136 (265)
Q Consensus 85 -~~~~~~--~~g~~viv~~~~~~~~~~~~~~~~----------~~~g~~~~~~~~------~---------d~~~l~~~~ 136 (265)
++..+. ..+++|++.+|.|++......... ...|+..+.++. . |++++++.+
T Consensus 117 ~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l 196 (433)
T 1zod_A 117 AAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLI 196 (433)
T ss_dssp HHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHH
Confidence 444332 345899999999987653321111 123566555432 1 388888887
Q ss_pred C----CCceEEEEecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcCC-----CCCCccEEEecccccc
Q 024619 137 G----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFI 202 (265)
Q Consensus 137 ~----~~~~~i~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~~-----~~~~~di~~~s~sK~~ 202 (265)
. +++++|++++.+||+|.+.+ +++|.++|++||+++|+||+|+ .+..+.. .....|++ |+||++
T Consensus 197 ~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~--s~sK~~ 274 (433)
T 1zod_A 197 DRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDIL--TLSKTL 274 (433)
T ss_dssp HHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECHHH
T ss_pred HhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEE--Eecccc
Confidence 6 46777777766788997755 9999999999999999999998 3332221 12235654 789999
Q ss_pred ccCCCceeeEEEeechhH
Q 024619 203 AGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 203 ~g~~g~~~G~v~~~~~~~ 220 (265)
+ + |+++|+++++++.+
T Consensus 275 ~-~-G~~ig~~~~~~~~~ 290 (433)
T 1zod_A 275 G-A-GLPLAAIVTSAAIE 290 (433)
T ss_dssp H-T-TSSCEEEEECHHHH
T ss_pred c-C-CCCeeEEEEhHHHH
Confidence 5 3 78999999877443
No 207
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.75 E-value=9.4e-18 Score=150.59 Aligned_cols=231 Identities=16% Similarity=0.146 Sum_probs=148.1
Q ss_pred cceeEeeccCC--CCCCCCCCCCeeeccccccCCCCCCCCCccC-CCCChhHHHHHHHHHhHhC--CCceEEecchHHHH
Q 024619 9 VSTLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYT-RSGNPTRDALESLLAKLDK--ADRALCFTSGMAAL 83 (265)
Q Consensus 9 ~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~-~~g~~~~~~l~~~l~~~~g--~~~~i~~~~g~~al 83 (265)
.+.++|+|+++ ...+|..+|.+..+..-+... ..+.++ ....+...+++++++++++ .+.+++++||++|+
T Consensus 52 ~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~----~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~ 127 (476)
T 3i5t_A 52 DGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMV----LPYASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAV 127 (476)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHH----CCCCCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHH
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHh----ccCcccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHH
Confidence 34678999743 466898776666665422221 122222 1234679999999999984 55788888889998
Q ss_pred H-HHHHhc--------CCCCEEEEcCCCCCChHHHHHhhcC-----------CCCeEEEeecC-----C-C--------H
Q 024619 84 A-AVTHLL--------GTGEEIVAGDDLYGGTDRLLSRVTP-----------KTGVVVKRVNT-----C-D--------L 129 (265)
Q Consensus 84 ~-~~~~~~--------~~g~~viv~~~~~~~~~~~~~~~~~-----------~~g~~~~~~~~-----~-d--------~ 129 (265)
. ++..+. ..++.|++.++.|+++......... ..+...+..+. + + +
T Consensus 128 ~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 207 (476)
T 3i5t_A 128 DSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLV 207 (476)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHH
Confidence 6 554443 3367899999999887643322111 12333433332 1 1 6
Q ss_pred HHHHhhcC----CCceEEEEecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcC------CCCCCccEE
Q 024619 130 DEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR------PLELGADIV 194 (265)
Q Consensus 130 ~~l~~~~~----~~~~~i~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~------~~~~~~di~ 194 (265)
+++++.+. +++++|++++++|++|.+.+ +++|.++|++||+++|+||+|. .+..+. ......|++
T Consensus 208 ~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~ 287 (476)
T 3i5t_A 208 QEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDII 287 (476)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEE
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchh
Confidence 78887775 56789999999999997654 9999999999999999999997 333221 223346776
Q ss_pred EeccccccccCCC-ceeeEEEeechhHHHHHHHH-------HHhccCCCChhHHHHHHhccC
Q 024619 195 MHSATKFIAGHSD-VMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 195 ~~s~sK~~~g~~g-~~~G~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~ 248 (265)
+++|.+++ | ++.|+++++++.+ +.+... ........++..++..+..|+
T Consensus 288 --t~sK~l~~--G~~plg~v~~~~~i~-~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~ 344 (476)
T 3i5t_A 288 --TFAKGVTS--GYVPLGGLAISEAVL-ARISGENAKGSWFTNGYTYSNQPVACAAALANIE 344 (476)
T ss_dssp --EECGGGGT--TSSCCEEEEECHHHH-HTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHH
T ss_pred --hhhhhhcC--CCcCeEEEEECHHHH-HHHhcCCcccccccccCCCCcCHHHHHHHHHHHH
Confidence 56899954 6 7889998876433 322221 112334455666555554444
No 208
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.75 E-value=8.6e-19 Score=155.20 Aligned_cols=199 Identities=17% Similarity=0.133 Sum_probs=133.9
Q ss_pred cceeEeeccCC--CCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHh-CCCceEEecchHHHHH-
Q 024619 9 VSTLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALA- 84 (265)
Q Consensus 9 ~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-g~~~~i~~~~g~~al~- 84 (265)
.+.++++|+++ ..++|..+|.+..+..-.... ...+.| ..+...++++.+++++ +.+.++++++|++|+.
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~---~~~~~~---~~~~~~~l~~~la~~~~~~~~v~~~~~Gsea~~~ 124 (429)
T 3k28_A 51 DGNEYIDYVLSWGPLIHGHANDRVVEALKAVAER---GTSFGA---PTEIENKLAKLVIERVPSIEIVRMVNSGTEATMS 124 (429)
T ss_dssp TCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHH---CSCCSS---CCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHH
T ss_pred CCCEEEECCCChhhcccCCCCHHHHHHHHHHHhh---CcCcCC---CCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHH
Confidence 34678999742 256887666665554322211 111111 2366888999999988 5667888888899986
Q ss_pred HHHHhc--CCCCEEEEcCCCCCChHHHHHhhcCCCC-------------e------EEEeecCCCHHHHHhhcC---CCc
Q 024619 85 AVTHLL--GTGEEIVAGDDLYGGTDRLLSRVTPKTG-------------V------VVKRVNTCDLDEVASAIG---PWT 140 (265)
Q Consensus 85 ~~~~~~--~~g~~viv~~~~~~~~~~~~~~~~~~~g-------------~------~~~~~~~~d~~~l~~~~~---~~~ 140 (265)
++..+. .+++.|++.+++|+.+.. ......| . ++..++..|++++++++. +++
T Consensus 125 ai~~a~~~~~~~~vi~~~~~yhg~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 201 (429)
T 3k28_A 125 ALRLARGYTGRNKILKFIGCYHGHGD---SLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDI 201 (429)
T ss_dssp HHHHHHHHHTCCEEEEEETCCCCSCG---GGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGE
T ss_pred HHHHHHHhhCCCEEEEECCCcCCCcH---HHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCE
Confidence 454443 357889999999986642 1111111 1 344555668999998886 467
Q ss_pred eEEEEecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCCCCcC-----CCCCCccEEEeccccccccCCCceee
Q 024619 141 KLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLSR-----PLELGADIVMHSATKFIAGHSDVMAG 211 (265)
Q Consensus 141 ~~i~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~~~~~~~-----~~~~~~di~~~s~sK~~~g~~g~~~G 211 (265)
++|++++++|++|.+.+ +++|.++|++||+++|+||+|.....+. ......|++ ++||.++ . |+++|
T Consensus 202 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~--t~sK~~~-~-G~~iG 277 (429)
T 3k28_A 202 ACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRVAYNCGQGYYGVTPDLT--CLGKVIG-G-GLPVG 277 (429)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTSSTTHHHHHHTCCCSEE--EECGGGG-T-TSCCE
T ss_pred EEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchHHHHhCCCCcee--hhhhhhc-C-CCCeE
Confidence 88888888888888877 9999999999999999999996321111 112235554 6899994 3 68999
Q ss_pred EEEeechhH
Q 024619 212 VLAVKGERL 220 (265)
Q Consensus 212 ~v~~~~~~~ 220 (265)
+++++++.+
T Consensus 278 ~~~~~~~~~ 286 (429)
T 3k28_A 278 AYGGKAEIM 286 (429)
T ss_dssp EEEECHHHH
T ss_pred EEEEcHHHH
Confidence 998877543
No 209
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.75 E-value=3.2e-18 Score=153.91 Aligned_cols=158 Identities=16% Similarity=0.108 Sum_probs=122.0
Q ss_pred HHHHHHHHHhHhCCCc-----------eEEecchHHHHH-HHHHhcCC---------CC--------E--EEEcCCCCCC
Q 024619 57 RDALESLLAKLDKADR-----------ALCFTSGMAALA-AVTHLLGT---------GE--------E--IVAGDDLYGG 105 (265)
Q Consensus 57 ~~~l~~~l~~~~g~~~-----------~i~~~~g~~al~-~~~~~~~~---------g~--------~--viv~~~~~~~ 105 (265)
.+++.+++++++|.+. .+++++|++|+. ++..+.++ || . |+++.+.|++
T Consensus 115 e~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s 194 (486)
T 1js3_A 115 ETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSS 194 (486)
T ss_dssp HHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHH
T ss_pred HHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHH
Confidence 5577788899998763 577777888864 44443211 42 3 7789999988
Q ss_pred hHHHHHhhcCCCCeEEEeecCC-----CHHHHHhhcCCCc------eEEEEecCCCCccccccHHHHHHHHHHcCCEEEE
Q 024619 106 TDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWT------KLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (265)
Q Consensus 106 ~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~~~~~~------~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~ 174 (265)
+. ..++..|++++.++.+ |++++++++.+++ .+|++++++|++|.+.|+++|+++|++||+++++
T Consensus 195 ~~----~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhv 270 (486)
T 1js3_A 195 VE----RAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHV 270 (486)
T ss_dssp HH----HHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEE
T ss_pred HH----HHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEE
Confidence 76 4456678899999864 8999999997555 3888999999999999999999999999999999
Q ss_pred eCCcCCCCCcCC-C------CCCccEEEeccccccccCCCceeeEEEeechhH
Q 024619 175 DNSIMSPVLSRP-L------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 175 D~~~~~~~~~~~-~------~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
|++|+.+.+..+ . ..+.|.+++++||++++|.+ +|+++.+++..
T Consensus 271 D~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~--~G~l~~~~~~~ 321 (486)
T 1js3_A 271 DAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFD--CSAMWVKRRTD 321 (486)
T ss_dssp ECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSS--CEEEEESCHHH
T ss_pred ehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcc--eEEEEEeCHHH
Confidence 999987654321 1 12579999999999977654 69998887643
No 210
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.75 E-value=1.4e-18 Score=156.70 Aligned_cols=203 Identities=15% Similarity=0.114 Sum_probs=136.9
Q ss_pred EeeccCCCCCCCCCCCCeeeccccccC--CCCCCCCCccCCC-CCh-hHHHHHHHHHhHhCCC---ceEEecchHHHHH-
Q 024619 13 LMNFSNEFDPYGALSTPLYQTATFKQP--SATENGPYDYTRS-GNP-TRDALESLLAKLDKAD---RALCFTSGMAALA- 84 (265)
Q Consensus 13 ~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~---~~i~~~~g~~al~- 84 (265)
.++++ ++.|++..+.+.......... .........|... +.. ..+++.+++++++|.+ .++++++|++|+.
T Consensus 95 ~~~~~-~~~yl~~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~ 173 (497)
T 2qma_A 95 AIFTQ-HPDCIAHLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQM 173 (497)
T ss_dssp SCCTT-STTBCSSSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHH
T ss_pred CCCCC-CCCeeEeCCCCCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHH
Confidence 34666 788888777665444321110 0011112233333 112 2455677799999873 4666677778874
Q ss_pred HHHHh----c---------CC------CC-EEEEcCCCCCChHHHHHhhcCCCCe-EEEeecCC-----CHHHHHhhcCC
Q 024619 85 AVTHL----L---------GT------GE-EIVAGDDLYGGTDRLLSRVTPKTGV-VVKRVNTC-----DLDEVASAIGP 138 (265)
Q Consensus 85 ~~~~~----~---------~~------g~-~viv~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~-----d~~~l~~~~~~ 138 (265)
++..+ + ++ |+ .|+++.+.|.++...+. ... .|. +++.++.+ |++++++++.+
T Consensus 174 al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~-~~g-~g~~~v~~v~~~~~~~~d~~~L~~~i~~ 251 (497)
T 2qma_A 174 GLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSAS-WMG-LGEKAVMTVDANADGTMDITKLDEVIAQ 251 (497)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHH-HTT-SCGGGEEEECBCTTSSBCGGGHHHHHHH
T ss_pred HHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHH-HcC-CCcccEEEEecCCCCcCCHHHHHHHHHH
Confidence 44432 2 12 46 78899999988875542 222 133 67777765 88999888864
Q ss_pred C----c--eEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCC-----CC-CccEEEeccccccccCC
Q 024619 139 W----T--KLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL-----EL-GADIVMHSATKFIAGHS 206 (265)
Q Consensus 139 ~----~--~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~-----~~-~~di~~~s~sK~~~g~~ 206 (265)
+ + .+|++++++|++|.+.|+++|.++|++||+++++|++|+.+...... .. +.|+++.|+|||+++|.
T Consensus 252 ~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~ 331 (497)
T 2qma_A 252 AKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTI 331 (497)
T ss_dssp HHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCS
T ss_pred HHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCc
Confidence 2 3 38888999999999999999999999999999999999877654221 22 57999999999998875
Q ss_pred CceeeEEEeechhH
Q 024619 207 DVMAGVLAVKGERL 220 (265)
Q Consensus 207 g~~~G~v~~~~~~~ 220 (265)
+ +|+++.+++..
T Consensus 332 ~--~G~l~~~~~~~ 343 (497)
T 2qma_A 332 S--CGALLVNDKSN 343 (497)
T ss_dssp S--CEEEEESCGGG
T ss_pred c--eEEEEEeCHHH
Confidence 5 68888876653
No 211
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.74 E-value=4.6e-18 Score=151.87 Aligned_cols=203 Identities=13% Similarity=0.088 Sum_probs=135.2
Q ss_pred eEeeccCC--CCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhC--CCceEEecchHHHHH-HH
Q 024619 12 LLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALA-AV 86 (265)
Q Consensus 12 ~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g--~~~~i~~~~g~~al~-~~ 86 (265)
++|+|.++ ..++|..+|.+..+..-+... .....+.....+...+++++++++++ .+.++++++|++|+. ++
T Consensus 76 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~---~~~~~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Al 152 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGHGHPALDQALTTQLRV---MNHVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAA 152 (457)
T ss_dssp EEEETTHHHHTCTTCBTCHHHHHHHHHHHHH---CSCCCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHH
T ss_pred EEEECCCcHhhhccCCCCHHHHHHHHHHHHh---ccCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHH
Confidence 89999843 578998666665554322211 11111222234678899999999995 446788888889986 55
Q ss_pred HHhcC-------CC-CEEEEcCCCCCChHHHHHhhcC------------CCCeEEEeecC-----CCHHHHHhhcC---C
Q 024619 87 THLLG-------TG-EEIVAGDDLYGGTDRLLSRVTP------------KTGVVVKRVNT-----CDLDEVASAIG---P 138 (265)
Q Consensus 87 ~~~~~-------~g-~~viv~~~~~~~~~~~~~~~~~------------~~g~~~~~~~~-----~d~~~l~~~~~---~ 138 (265)
..+.+ +| +.|++.+++|+++......... ..+......+. .|++++++++. +
T Consensus 153 k~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~ 232 (457)
T 3tfu_A 153 KMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAG 232 (457)
T ss_dssp HHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCC
Confidence 54443 55 5889999999886533222211 01222222221 26788888886 6
Q ss_pred CceEEEEec-CCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcCC-----CCCCccEEEeccccccccCCC
Q 024619 139 WTKLVWVES-PTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSD 207 (265)
Q Consensus 139 ~~~~i~~~~-~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~~-----~~~~~di~~~s~sK~~~g~~g 207 (265)
++++|++++ ++|++|.+.+ +++|.++|++||+++|+||+|. .+..+.. .....|++ |++|.++| +.
T Consensus 233 ~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdii--t~sK~l~g-G~ 309 (457)
T 3tfu_A 233 ELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIM--CVGKALTG-GY 309 (457)
T ss_dssp GEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGT-TS
T ss_pred CEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEE--EEChhhhC-CC
Confidence 788999999 9999998865 8999999999999999999986 3322211 12346766 78998854 33
Q ss_pred ceeeEEEeechhH
Q 024619 208 VMAGVLAVKGERL 220 (265)
Q Consensus 208 ~~~G~v~~~~~~~ 220 (265)
+++|+++++++.+
T Consensus 310 ~~lG~v~~~~~i~ 322 (457)
T 3tfu_A 310 LSLAATLCTADVA 322 (457)
T ss_dssp SCCEEEEEEHHHH
T ss_pred cceEEEEEcHHHH
Confidence 5789998877543
No 212
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.74 E-value=6.5e-18 Score=149.29 Aligned_cols=200 Identities=17% Similarity=0.136 Sum_probs=131.1
Q ss_pred ceeEeeccCCC--CCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHh-CCCceEEecchHHHHH-H
Q 024619 10 STLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALA-A 85 (265)
Q Consensus 10 ~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-g~~~~i~~~~g~~al~-~ 85 (265)
+.++++|++.. +++|..+|.+..+..-.... ...+.| ..+...++++++++++ +.+.++++++|++|+. +
T Consensus 51 g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~---~~~~~~---~~~~~~~l~~~l~~~~~~~~~v~~~~~g~ea~~~a 124 (424)
T 2e7u_A 51 GNRYLDYVMSWGPLILGHAHPKVLARVRETLER---GLTFGA---PSPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSA 124 (424)
T ss_dssp CCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHT---CSCCSS---CCHHHHHHHHHHHHHCTTCCEEEEESSHHHHHHHH
T ss_pred CCEEEEccccccccccCCCCHHHHHHHHHHHHh---CCCCCC---CCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHH
Confidence 45688997322 67888444444443222111 111211 2356899999999998 6667888888889986 4
Q ss_pred HHH--hcCCCCEEEEcCCCCCChHHHHHhhc----------CCCCe------EEEeecCCCHHHHHhhcC---CCceEEE
Q 024619 86 VTH--LLGTGEEIVAGDDLYGGTDRLLSRVT----------PKTGV------VVKRVNTCDLDEVASAIG---PWTKLVW 144 (265)
Q Consensus 86 ~~~--~~~~g~~viv~~~~~~~~~~~~~~~~----------~~~g~------~~~~~~~~d~~~l~~~~~---~~~~~i~ 144 (265)
+.. .+.+++.|++.+|+|+++........ ...|+ ++..++..|++++++.+. +++++|+
T Consensus 125 l~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi 204 (424)
T 2e7u_A 125 LRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEYNDPEGLREVLKRRGEEIAAII 204 (424)
T ss_dssp HHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEE
T ss_pred HHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCCCCHHHHHHHHHhCCCCEEEEE
Confidence 443 24456889999999988642110111 11232 355666779999998886 4567777
Q ss_pred EecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCCCCcCC-----CCCCccEEEeccccccccCCCceeeEEEe
Q 024619 145 VESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAV 215 (265)
Q Consensus 145 ~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~~~~~~~~-----~~~~~di~~~s~sK~~~g~~g~~~G~v~~ 215 (265)
+++.++++|.+.+ +++|.++ ++||+++|+||+|+....+.. .....|++ |++|+++ + |+++|++++
T Consensus 205 ~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~--s~sK~l~-~-G~~~G~~~~ 279 (424)
T 2e7u_A 205 FEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLAFGGATELLGLKPDLV--TLGKILG-G-GLPAAAYAG 279 (424)
T ss_dssp ECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSSTTHHHHHHTCCCSEE--EECGGGG-T-TSSCEEEEE
T ss_pred EeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccchhHHHHHhCCCcchh--hhhhhhh-C-CcceEEEEE
Confidence 7665556898877 9999999 999999999999982211211 12235665 8899995 3 688999998
Q ss_pred echhH
Q 024619 216 KGERL 220 (265)
Q Consensus 216 ~~~~~ 220 (265)
+++.+
T Consensus 280 ~~~~~ 284 (424)
T 2e7u_A 280 RREIM 284 (424)
T ss_dssp CHHHH
T ss_pred cHHHH
Confidence 87543
No 213
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.74 E-value=2e-18 Score=149.26 Aligned_cols=150 Identities=15% Similarity=0.083 Sum_probs=110.9
Q ss_pred hHHHHHHHHHhHhCCC---ceEEecch-HHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC---
Q 024619 56 TRDALESLLAKLDKAD---RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~---~~i~~~~g-~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--- 127 (265)
.++++++++++++|.+ +++++++| ++++. ++..++++||+|++.++.+.+.. +...++..| +++.++.+
T Consensus 50 ~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g-~~~~v~~~~~~ 126 (362)
T 2c0r_A 50 VHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASK--ALKEAKLIG-DTHVAASSEAS 126 (362)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHHS-CEEEEEECGGG
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCCCCeEEEEecCcHhHH--HHHHHHHhC-CeEEEeccccc
Confidence 4789999999999987 34566554 58886 77788999999988766543321 123344456 66666532
Q ss_pred ------CHHHHHhhcCCCceEEEEecCCCCcccc-ccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCCCccEEEecccc
Q 024619 128 ------DLDEVASAIGPWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATK 200 (265)
Q Consensus 128 ------d~~~l~~~~~~~~~~i~~~~~~np~G~~-~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK 200 (265)
|.++++ +.+++++|++++++||||.+ .|+++| +|+++++|++|+.+....... +.|++++|+||
T Consensus 127 ~~~~~~~~~~~~--i~~~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~~~-~~d~~~~s~~K 197 (362)
T 2c0r_A 127 NYMTLPKLQEIQ--LQDNAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFDLN-QFGLVYAGAQK 197 (362)
T ss_dssp TTCSCCCGGGCC--CCTTEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCCCGG-GCSEEEEETTT
T ss_pred ccccCCCHHHcc--cCCCcCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccCCccchh-HCcEEEEeccc
Confidence 333332 67789999999999999996 677776 899999999999886542222 24899999999
Q ss_pred ccccCCCceeeEEEeechhH
Q 024619 201 FIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 201 ~~~g~~g~~~G~v~~~~~~~ 220 (265)
++ ||+| +|+++++++.+
T Consensus 198 ~~-g~~G--~G~l~~~~~~~ 214 (362)
T 2c0r_A 198 NL-GPSG--VTVVIVREDLV 214 (362)
T ss_dssp TT-CCSS--CEEEEEEGGGS
T ss_pred cc-cCcC--cEEEEEcHHHH
Confidence 99 6887 69998887654
No 214
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.74 E-value=1.3e-17 Score=148.77 Aligned_cols=232 Identities=16% Similarity=0.156 Sum_probs=140.4
Q ss_pred cceeEeeccCC--CCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhC---CCceEEecchHHHH
Q 024619 9 VSTLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAAL 83 (265)
Q Consensus 9 ~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g---~~~~i~~~~g~~al 83 (265)
.+.++++|+++ ...+|..+|.+..+..-+... ...+.+.....+.+.+++++++++++ .+.++++++|++|+
T Consensus 59 ~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~---~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~ 135 (451)
T 3oks_A 59 DGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGD---FTHTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAV 135 (451)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTT---CSCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHH
T ss_pred CCCEEEEcCCCccccccCCCCHHHHHHHHHHHHh---cccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHH
Confidence 34678999843 566887766666554322222 11222222234568999999999985 34688888889998
Q ss_pred H-HHHHhcC--CCCEEEEcCCCCCChHHHHHhhcCC----------CCeEEEeecCC------------------CHHHH
Q 024619 84 A-AVTHLLG--TGEEIVAGDDLYGGTDRLLSRVTPK----------TGVVVKRVNTC------------------DLDEV 132 (265)
Q Consensus 84 ~-~~~~~~~--~g~~viv~~~~~~~~~~~~~~~~~~----------~g~~~~~~~~~------------------d~~~l 132 (265)
. ++..+.. .++.|++.+++|+++.......... ....+..++.+ +++.+
T Consensus 136 ~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 215 (451)
T 3oks_A 136 ENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRA 215 (451)
T ss_dssp HHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHH
Confidence 6 4444432 4588999999998776443222111 11123344433 23333
Q ss_pred Hhhc----C-CCceEEEEecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcC-----CCCCCccEEEec
Q 024619 133 ASAI----G-PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHS 197 (265)
Q Consensus 133 ~~~~----~-~~~~~i~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~-----~~~~~~di~~~s 197 (265)
++.+ . +++++|++++.++..|.+.+ +++|.++|++||+++|+||+|. .+..+. ......|++ |
T Consensus 216 ~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--t 293 (451)
T 3oks_A 216 ITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLI--V 293 (451)
T ss_dssp HHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--E
T ss_pred HHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCee--e
Confidence 3333 3 34667777776666677655 9999999999999999999997 222221 112245665 7
Q ss_pred cccccccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHHHhccC
Q 024619 198 ATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 198 ~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (265)
++|.+++ |++.|+++++++.+ +.+...........++..++..+..++
T Consensus 294 ~sK~l~~--G~~iG~v~~~~~~~-~~~~~~~~~~t~~~~~~~~aaa~aal~ 341 (451)
T 3oks_A 294 TAKGIAG--GLPLSAVTGRAEIM-DSPHVSGLGGTYGGNPIACAAALATIE 341 (451)
T ss_dssp ECGGGGT--TSSCEEEEEEHHHH-TCSCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred ehhhhhC--CcceEEEEECHHHH-hhhcCCCcCCCCCCCHHHHHHHHHHHH
Confidence 8899954 68999998876543 323222233344556666555444443
No 215
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.74 E-value=1.1e-17 Score=149.95 Aligned_cols=232 Identities=16% Similarity=0.077 Sum_probs=148.2
Q ss_pred cceeEeeccCC--CCCCCCCCCCeeeccccccCCCCCCCCCccCCC--CChhHHHHHHHHHhHhCC--CceEEecchHHH
Q 024619 9 VSTLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS--GNPTRDALESLLAKLDKA--DRALCFTSGMAA 82 (265)
Q Consensus 9 ~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~--g~~~~~~l~~~l~~~~g~--~~~i~~~~g~~a 82 (265)
.+.++|+|.++ ...+|..+|.+..+..-+... ..+.|+.. ..+...+++++++++++. +.++++++|++|
T Consensus 53 ~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~----~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA 128 (472)
T 3hmu_A 53 EGEEILDAMAGLWCVNIGYGRDELAEVAARQMRE----LPYYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEA 128 (472)
T ss_dssp TCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHH----CSCCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHH
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHh----ccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHH
Confidence 35689999843 577998766666654322211 12223322 346789999999999854 467888888999
Q ss_pred HH-HHHHhcC--------CCCEEEEcCCCCCChHHHHHhhcC----------CCCeEEEeecC----C---C--------
Q 024619 83 LA-AVTHLLG--------TGEEIVAGDDLYGGTDRLLSRVTP----------KTGVVVKRVNT----C---D-------- 128 (265)
Q Consensus 83 l~-~~~~~~~--------~g~~viv~~~~~~~~~~~~~~~~~----------~~g~~~~~~~~----~---d-------- 128 (265)
+. ++..+.+ +++.|++.+++|+.+......... ..+...+..|. . |
T Consensus 129 ~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~ 208 (472)
T 3hmu_A 129 NDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLAR 208 (472)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcccCHHHHHHHH
Confidence 86 5554443 468899999999887543322211 11333333332 1 1
Q ss_pred HHHHHhhcC----CCceEEEEecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcC-----CCCCCccEE
Q 024619 129 LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIV 194 (265)
Q Consensus 129 ~~~l~~~~~----~~~~~i~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~-----~~~~~~di~ 194 (265)
++++++.+. +++++|+++++++++|.+.+ +++|.++|++||+++|+||+|. .+..+. ......|++
T Consensus 209 ~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~ 288 (472)
T 3hmu_A 209 ARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIM 288 (472)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCcee
Confidence 677877775 56788999999999998876 9999999999999999999997 333321 112346776
Q ss_pred EeccccccccCCCceeeEEEeechhHHHHHHHH--HHhccCCCChhHHHHHHhccC
Q 024619 195 MHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 195 ~~s~sK~~~g~~g~~~G~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~ 248 (265)
+++|.++ .++++.|+++++++.+ +.+... ........++..++..+..|+
T Consensus 289 --t~sK~l~-gg~~plG~v~~~~~i~-~~~~~~~~~~~~t~~~np~a~aAa~aaL~ 340 (472)
T 3hmu_A 289 --TIAKGLS-SGYAPIGGSIVCDEVA-HVIGKDEFNHGYTYSGHPVAAAVALENLR 340 (472)
T ss_dssp --EECGGGT-TTSSCCEEEEEEHHHH-HHHTTSCBCCCCTTTTCHHHHHHHHHHHH
T ss_pred --eechhhh-cCCcceEEEEECHHHH-HhcccCCccccCCCCCCHHHHHHHHHHHH
Confidence 4689984 4557889998876544 333111 111233445666555555444
No 216
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.74 E-value=5.5e-18 Score=149.99 Aligned_cols=202 Identities=15% Similarity=0.166 Sum_probs=130.6
Q ss_pred cceeEeeccCCC--CCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHh-CCCceEEecchHHHHH-
Q 024619 9 VSTLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALA- 84 (265)
Q Consensus 9 ~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-g~~~~i~~~~g~~al~- 84 (265)
.+.++++|+++. ..+|..+|.+..+..-.... ...+.| ..+...++++++++++ +.+.++++++|++|+.
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~---~~~~~~---~~~~~~~la~~l~~~~~~~~~v~~~~sGsea~~~ 124 (429)
T 4e77_A 51 DGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVER---GLSFGA---PTEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMS 124 (429)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTT---CSCCSS---CCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHH
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHh---CcccCC---CCHHHHHHHHHHHhhCCCCCEEEEeCcHHHHHHH
Confidence 346789997433 56887666666554322221 111222 2367889999999988 4557888888899986
Q ss_pred HHHHh--cCCCCEEEEcCCCCCChHHHHHh----------hcCCCC------eEEEeecCCCHHHHHhhcC---CCceEE
Q 024619 85 AVTHL--LGTGEEIVAGDDLYGGTDRLLSR----------VTPKTG------VVVKRVNTCDLDEVASAIG---PWTKLV 143 (265)
Q Consensus 85 ~~~~~--~~~g~~viv~~~~~~~~~~~~~~----------~~~~~g------~~~~~~~~~d~~~l~~~~~---~~~~~i 143 (265)
++... ..+++.|++.++.|++....... .....+ ..+..++..|++++++++. +++++|
T Consensus 125 al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~v 204 (429)
T 4e77_A 125 AIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACI 204 (429)
T ss_dssp HHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEE
T ss_pred HHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEE
Confidence 44432 23567899999999887631100 001111 1345556668999998885 456777
Q ss_pred EEecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC---CCCc--CCCCCCccEEEeccccccccCCCceeeEEE
Q 024619 144 WVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS---PVLS--RPLELGADIVMHSATKFIAGHSDVMAGVLA 214 (265)
Q Consensus 144 ~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~~---~~~~--~~~~~~~di~~~s~sK~~~g~~g~~~G~v~ 214 (265)
++++.++.+|.+.+ +++|.++|++||+++|+||+|.. +... .......|++ |+||.++ +|+++|+++
T Consensus 205 i~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g~~~~~~~~~~~pdi~--t~sK~~~--~G~~~G~~~ 280 (429)
T 4e77_A 205 IVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYHVIPDLT--CLGKIIG--GGMPVGAFG 280 (429)
T ss_dssp EECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTBTTCHHHHTTCCCSEE--EEEGGGG--TTSCCEEEE
T ss_pred EECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccCcchHHHhcCCCCCee--eeccccc--CCCCeEEEE
Confidence 77766666677776 99999999999999999999982 2111 1112345664 7899995 368899998
Q ss_pred eechhH
Q 024619 215 VKGERL 220 (265)
Q Consensus 215 ~~~~~~ 220 (265)
.+++.+
T Consensus 281 ~~~~~~ 286 (429)
T 4e77_A 281 GRREVM 286 (429)
T ss_dssp ECHHHH
T ss_pred ECHHHH
Confidence 876543
No 217
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.73 E-value=1.6e-17 Score=148.26 Aligned_cols=232 Identities=17% Similarity=0.176 Sum_probs=139.9
Q ss_pred cceeEeeccCC--CCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhC---CCceEEecchHHHH
Q 024619 9 VSTLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAAL 83 (265)
Q Consensus 9 ~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g---~~~~i~~~~g~~al 83 (265)
.+.++|+|+++ ...+|..+|.+.++..-+... ...+.+.....+.+.+++++++++++ .+.++++++|++|+
T Consensus 62 ~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~---~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~ 138 (453)
T 4ffc_A 62 DGNSFIDLGAGIAVTTVGASHPAVAAAIADQATH---FTHTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAV 138 (453)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHH---CSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHH
T ss_pred CCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHh---ccccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHH
Confidence 34679999843 567888766665554322211 11222222234668999999999986 34678888889998
Q ss_pred H-HHHHhc--CCCCEEEEcCCCCCChHHHHHhhcCC------------CCeEEEeecCC--C-------------HHHHH
Q 024619 84 A-AVTHLL--GTGEEIVAGDDLYGGTDRLLSRVTPK------------TGVVVKRVNTC--D-------------LDEVA 133 (265)
Q Consensus 84 ~-~~~~~~--~~g~~viv~~~~~~~~~~~~~~~~~~------------~g~~~~~~~~~--d-------------~~~l~ 133 (265)
. ++..+. ..++.|++.+++|+++.......... .+...+.++.. | .+.++
T Consensus 139 ~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~ 218 (453)
T 4ffc_A 139 ENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIE 218 (453)
T ss_dssp HHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHH
Confidence 6 443433 24588999999998776443222111 13333333311 2 35666
Q ss_pred hhcCCC-ceEEEEecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcCCC-----CCCccEEEecccccc
Q 024619 134 SAIGPW-TKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSRPL-----ELGADIVMHSATKFI 202 (265)
Q Consensus 134 ~~~~~~-~~~i~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~~~-----~~~~di~~~s~sK~~ 202 (265)
+.+.++ +++|++++.++..|.+.+ +++|.++|++||+++|+||+|. .+..+... ....|++ +++|.+
T Consensus 219 ~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~--t~sK~~ 296 (453)
T 4ffc_A 219 TQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIV--TMAKGI 296 (453)
T ss_dssp HHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGG
T ss_pred HhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchH--hhhhhh
Confidence 666544 555666655445556654 8999999999999999999996 33222111 2234555 678999
Q ss_pred ccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHHHhccC
Q 024619 203 AGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 248 (265)
Q Consensus 203 ~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (265)
+ + |++.|+++++++.+ +.+...........++..++..+..|+
T Consensus 297 ~-~-G~~~G~~~~~~~i~-~~~~~~~~~~t~~~~~~~~aaa~aal~ 339 (453)
T 4ffc_A 297 A-G-GMPLSAVTGRAELM-DAVYAGGLGGTYGGNPVTCAAAVAALG 339 (453)
T ss_dssp G-T-TSSCEEEEEEHHHH-TTSCTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred c-C-CcCeEEEEECHHHH-hhhcccCcCCCCCcCHHHHHHHHHHHH
Confidence 4 4 68999998876543 323222233344555665554444443
No 218
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.72 E-value=2.8e-17 Score=145.97 Aligned_cols=157 Identities=21% Similarity=0.218 Sum_probs=120.3
Q ss_pred hHHHHHHHHHhHhCCCc--eEEecchHHHHH-HHHH-hcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC----
Q 024619 56 TRDALESLLAKLDKADR--ALCFTSGMAALA-AVTH-LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~~--~i~~~~g~~al~-~~~~-~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (265)
..+++++.+++++|.+. ++++++++.+.. +.+. ..++||+|+++.+.|+++...+...++..|++++.++..
T Consensus 109 ~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~~~~~ 188 (438)
T 1wyu_A 109 ATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGRT 188 (438)
T ss_dssp HHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTBC
T ss_pred HHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcCcCCcc
Confidence 48899999999999873 345555554433 2222 357899999999999999887766667789999999853
Q ss_pred CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCC-cCCCCCcCCCCCCccEEEecccc-----c
Q 024619 128 DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS-IMSPVLSRPLELGADIVMHSATK-----F 201 (265)
Q Consensus 128 d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~-~~~~~~~~~~~~~~di~~~s~sK-----~ 201 (265)
|+++ +.+++++|++++| ||+|.+.|+++|+++|+++|+++++|.. ++.+....+...+.|++++|.+| |
T Consensus 189 d~~~----i~~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~~~~g~D~~~~s~kk~~~~~~ 263 (438)
T 1wyu_A 189 PLPE----VGEEVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLPMG 263 (438)
T ss_dssp CCCC----CCTTEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCHHHHTCSEEEEECTTTTCCCG
T ss_pred CHHH----hCCCeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCCccCCCCEEEECCcccCCCcc
Confidence 2333 6678999999999 9999999999999999999999997733 55555544555678999999554 5
Q ss_pred cccCCCceeeEEEeechhH
Q 024619 202 IAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 202 ~~g~~g~~~G~v~~~~~~~ 220 (265)
++|| + +|+++++++.+
T Consensus 264 ~~Gp-~--~G~l~~~~~~~ 279 (438)
T 1wyu_A 264 FGGP-H--FGFLATKKAFV 279 (438)
T ss_dssp GGCS-C--CEEEEECGGGG
T ss_pred CCCC-C--eeEEEEcHHHH
Confidence 6565 4 69998887644
No 219
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.72 E-value=4e-18 Score=147.02 Aligned_cols=150 Identities=15% Similarity=0.153 Sum_probs=111.6
Q ss_pred hHHHHHHHHHhHhCCC--ceE-Eecch-HHHHH-HHHHhcCC---CCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC
Q 024619 56 TRDALESLLAKLDKAD--RAL-CFTSG-MAALA-AVTHLLGT---GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i-~~~~g-~~al~-~~~~~~~~---g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 127 (265)
..+++++++++++|.+ +.+ +++++ ++|+. ++..++.+ ||.|+++.+.|... ..++..| +++.++.+
T Consensus 49 ~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~-----~~~~~~g-~~~~v~~~ 122 (360)
T 1w23_A 49 VHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL-----KEAKLLG-ETHIAAST 122 (360)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHH-----HHHHTTS-EEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHHH-----HHHHHhC-CeEEeecc
Confidence 4889999999999986 244 55555 68886 56777765 55677666655432 2345678 88888742
Q ss_pred ------CHHHHHh-hcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCCCccEEEecccc
Q 024619 128 ------DLDEVAS-AIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATK 200 (265)
Q Consensus 128 ------d~~~l~~-~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK 200 (265)
|++++++ ++.+++++|++++++||||.+.+ + +++++|+++|+|++|+.+....... ..|++++|+||
T Consensus 123 ~~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG~~~~--~---i~~~~~~~li~D~a~~~~~~~~~~~-~~di~~~s~sK 196 (360)
T 1w23_A 123 KANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQ--N---FPEINHAPLIADMSSDILSRPLKVN-QFGMIYAGAQK 196 (360)
T ss_dssp GGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTEECS--S---CCCCCSSCEEEECTTTTTSSCCCGG-GCSEEEEETTT
T ss_pred cccCcCCccchHhhccCCCCCEEEEeCCCCCcceecc--c---ccccCCceEEEechhhcCCCCcCcc-cCCEEEEEccc
Confidence 6788888 88888999999999999999976 3 3338999999999999876542222 23899999999
Q ss_pred ccccCCCceeeEEEeechhH
Q 024619 201 FIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 201 ~~~g~~g~~~G~v~~~~~~~ 220 (265)
++ +++| .|+++++++.+
T Consensus 197 ~~-~~~G--~G~~~~~~~~~ 213 (360)
T 1w23_A 197 NL-GPSG--VTVVIVKKDLL 213 (360)
T ss_dssp TT-SCTT--CEEEEEEHHHH
T ss_pred cc-CCCC--cEEEEEcHHHH
Confidence 99 5777 58888887554
No 220
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.71 E-value=1e-17 Score=150.25 Aligned_cols=158 Identities=13% Similarity=0.044 Sum_probs=122.1
Q ss_pred HHHHHHHHHhHhCCC-----------ceEEecchHHHHH-HHHHhc-------------------CCCCEEEEcCCCCCC
Q 024619 57 RDALESLLAKLDKAD-----------RALCFTSGMAALA-AVTHLL-------------------GTGEEIVAGDDLYGG 105 (265)
Q Consensus 57 ~~~l~~~l~~~~g~~-----------~~i~~~~g~~al~-~~~~~~-------------------~~g~~viv~~~~~~~ 105 (265)
.+++.+++++++|.+ ..+++++|++++. ++.... .+++.|+++..+|.+
T Consensus 115 E~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s 194 (475)
T 3k40_A 115 EVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSS 194 (475)
T ss_dssp HHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHH
T ss_pred HHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHH
Confidence 556677889999876 3677888887763 443331 134689999999988
Q ss_pred hHHHHHhhcCCCCeEEEeecCC----CHHHHHhhcCCC------ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEe
Q 024619 106 TDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPW------TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 106 ~~~~~~~~~~~~g~~~~~~~~~----d~~~l~~~~~~~------~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D 175 (265)
+.. .++..|++++.++.+ |++++++++.++ +.+|+++.++|++|.+.|+++|+++|++||+++++|
T Consensus 195 ~~~----~~~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD 270 (475)
T 3k40_A 195 VER----AGLLGGVKLRSVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVD 270 (475)
T ss_dssp HHH----HHHHHTCEEEEECCBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEE
T ss_pred HHH----HHHHcCCceEEEECCCCCcCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEe
Confidence 874 345578899999874 899999998643 667888999999999999999999999999999999
Q ss_pred CCcCCCCCcCCC----C---CCccEEEeccccccccCCCceeeEEEeechhH
Q 024619 176 NSIMSPVLSRPL----E---LGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 176 ~~~~~~~~~~~~----~---~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
++|+.+....+. . ...|.++.++|||+++|.| +|+++.++...
T Consensus 271 ~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g--~g~l~~~~~~~ 320 (475)
T 3k40_A 271 AAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFD--CSAMWLKDPSW 320 (475)
T ss_dssp CTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSS--CEEEEESSGGG
T ss_pred HHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCc--eEEEEEeCHHH
Confidence 999876542211 1 1359999999999988887 47777776543
No 221
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.71 E-value=4.9e-17 Score=146.10 Aligned_cols=170 Identities=15% Similarity=0.075 Sum_probs=128.1
Q ss_pred CCCccCCC-CCh-hHHHHHHHHHhHhCCCc------------eEEecchHHHHH-HHHHhc-------------------
Q 024619 45 GPYDYTRS-GNP-TRDALESLLAKLDKADR------------ALCFTSGMAALA-AVTHLL------------------- 90 (265)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~~~------------~i~~~~g~~al~-~~~~~~------------------- 90 (265)
....|... +.. ..+++.+++++++|.+. .+++++|++++. ++....
T Consensus 106 ~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~ 185 (481)
T 4e1o_A 106 LGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSL 185 (481)
T ss_dssp CCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHH
T ss_pred ccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccc
Confidence 34455554 222 36667778889988762 477788887763 444332
Q ss_pred CCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-----CHHHHHhhcCCC------ceEEEEecCCCCccccccHH
Q 024619 91 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPW------TKLVWVESPTNPRQQICDIR 159 (265)
Q Consensus 91 ~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~~~~~------~~~i~~~~~~np~G~~~~l~ 159 (265)
.+++.|+++..+|.++... ++..|.+++.++.+ |++++++++.++ +.+|+++.++|++|.+.|++
T Consensus 186 ~~~~~v~~s~~~H~s~~~~----~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~ 261 (481)
T 4e1o_A 186 NARLVAYASDQAHSSVEKA----GLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLS 261 (481)
T ss_dssp HTTEEEEEETTSCHHHHHH----HHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHH
T ss_pred cCCeEEEEcCcchHHHHHH----HHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHH
Confidence 1567899999999888744 34568899999865 899999998643 67788899999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCcCCCCCcCC----CCCC---ccEEEeccccccccCCCceeeEEEeechhH
Q 024619 160 KIAEMAHAHGALLLVDNSIMSPVLSRP----LELG---ADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 160 ~i~~~a~~~~~~li~D~~~~~~~~~~~----~~~~---~di~~~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
+|+++|++||+++++|++|+.+.+..+ ...+ .|.++.++|||+++|.| +|+++.++...
T Consensus 262 ~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g--~g~l~~~~~~~ 327 (481)
T 4e1o_A 262 ELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFD--CTGFWVKDKYK 327 (481)
T ss_dssp HHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSS--CEEEEESBHHH
T ss_pred HHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCc--eEEEEEeCHHH
Confidence 999999999999999999987654321 1123 59999999999999887 47777777654
No 222
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.54 E-value=7.7e-19 Score=156.59 Aligned_cols=201 Identities=16% Similarity=0.110 Sum_probs=138.5
Q ss_pred cceeEeeccCCCCC---CCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHh-CCCceEEecchHHHHH
Q 024619 9 VSTLLMNFSNEFDP---YGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALA 84 (265)
Q Consensus 9 ~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-g~~~~i~~~~g~~al~ 84 (265)
.+.++|+|. ++.+ +|..+|.+..+..- +......+.| .++...++++.+++++ +.+.+++++||++|+.
T Consensus 98 dG~~yiD~~-~~~~~~~lGh~~p~V~~Av~~---q~~~~~~~~~---~~~~~~~Lae~L~~~~p~~~~v~~~nSGseA~~ 170 (465)
T 2yky_A 98 DGHAYVNFL-GEYTAGLFGHSHPVIRAAVER---ALAVGLNLST---QTENEALFAEAVCDRFPSIDLVRFTNSGTEANL 170 (465)
Confidence 457899998 5554 78766666655432 2111111111 3356888999999998 6777889999999986
Q ss_pred -HHHHh--cCCCCEEEEcCCCCCChHHHHHhhcCCCCe--EEEeecCCCHHHHHhhcC---CCceEEEEecCCCCccccc
Q 024619 85 -AVTHL--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQIC 156 (265)
Q Consensus 85 -~~~~~--~~~g~~viv~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~d~~~l~~~~~---~~~~~i~~~~~~np~G~~~ 156 (265)
++..+ ...+++|++.+++|++.......-....|+ .+..++..|++++++++. +++++|++++.++++|.+.
T Consensus 171 ~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~ 250 (465)
T 2yky_A 171 MALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVYNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVP 250 (465)
Confidence 44332 244689999999998865321100012334 445556678999998887 6789999988777799876
Q ss_pred c----HHHHHHHHHHcCCEEEEeCCcCCCCCcCCC-----CCCccEEEeccccccccCCCceeeEEEeechhHH
Q 024619 157 D----IRKIAEMAHAHGALLLVDNSIMSPVLSRPL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 221 (265)
Q Consensus 157 ~----l~~i~~~a~~~~~~li~D~~~~~~~~~~~~-----~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~ 221 (265)
+ +++|.++|++||+++|+||+|. +..+... ....|++ |++|++++ |+++|+++++++.+.
T Consensus 251 ~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~--t~sK~lg~--G~piG~v~~~~~i~~ 319 (465)
T 2yky_A 251 AERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADLT--TLGKYIGG--GMSFGAFGGRRDLME 319 (465)
Confidence 6 9999999999999999999999 5332111 1234554 79999954 688999988876543
No 223
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.69 E-value=9.9e-17 Score=142.88 Aligned_cols=198 Identities=13% Similarity=0.061 Sum_probs=126.3
Q ss_pred ceeEeeccCC--CCCCCCCCCCee-e-cccc---ccCCCCCCCCCccCCC-CChhHHHHHHHHHhHhC---CCceEEecc
Q 024619 10 STLLMNFSNE--FDPYGALSTPLY-Q-TATF---KQPSATENGPYDYTRS-GNPTRDALESLLAKLDK---ADRALCFTS 78 (265)
Q Consensus 10 ~~~~~~~~~~--~~~~g~~~~~~~-~-~~~~---~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g---~~~~i~~~~ 78 (265)
+..+++|++. ...+|..+|.+. + +..- .... .. .|+.. ..+...++++.++++++ .+.++++++
T Consensus 53 g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~---~~--~~~~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~ 127 (449)
T 2cjg_A 53 GRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAAL---NK--PSNSDVYSVAMARFVETFARVLGDPALPHLFFVEG 127 (449)
T ss_dssp CCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHT---CC--CCTTTCCCHHHHHHHHHHHHHHCCTTCCEEEEESS
T ss_pred CcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHh---cC--CCCcccCCHHHHHHHHHHHHhcCCCCCCEEEEeCc
Confidence 4568888522 245777655555 4 4332 1111 11 13322 34568899999999985 346777778
Q ss_pred hHHHHH-HHHHh---cC----------C-CCEEEEcCCCCCChHHHHHhhcC----------CCCeEEEeecCCC--HH-
Q 024619 79 GMAALA-AVTHL---LG----------T-GEEIVAGDDLYGGTDRLLSRVTP----------KTGVVVKRVNTCD--LD- 130 (265)
Q Consensus 79 g~~al~-~~~~~---~~----------~-g~~viv~~~~~~~~~~~~~~~~~----------~~g~~~~~~~~~d--~~- 130 (265)
|++|+. ++..+ .. + |++|++.+|.|+++...+..... ....++..++.+| .+
T Consensus 128 gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 207 (449)
T 2cjg_A 128 GALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDE 207 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCH
T ss_pred hHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhc
Confidence 889986 44322 12 2 89999999999886532111111 1112556666655 32
Q ss_pred ------------HHHhhcC---CCceEEEEecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcCC----
Q 024619 131 ------------EVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSRP---- 186 (265)
Q Consensus 131 ------------~l~~~~~---~~~~~i~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~~---- 186 (265)
++++.+. +++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+ .+..+..
T Consensus 208 ~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~ 287 (449)
T 2cjg_A 208 PAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQ 287 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHH
T ss_pred cccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeec
Confidence 3777773 67889998888899997665 9999999999999999999998 3332211
Q ss_pred -CCCCccEEEeccccccccCCCceeeEEEeechhH
Q 024619 187 -LELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 187 -~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
.....|++ |+||++ | .|+++++++.+
T Consensus 288 ~~~~~~di~--t~sK~l--~----iG~~~~~~~~~ 314 (449)
T 2cjg_A 288 QLDVAPDIV--AFGKKT--Q----VCGVMAGRRVD 314 (449)
T ss_dssp HHTCCCSEE--EECGGG--S----SEEEEECGGGG
T ss_pred ccCCCceEE--EecCcc--c----EEEEEECHHHh
Confidence 12345765 678988 3 57787776443
No 224
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.68 E-value=3.3e-16 Score=139.83 Aligned_cols=162 Identities=17% Similarity=0.193 Sum_probs=110.9
Q ss_pred ccCCCCChhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHhcCC-----C----CEEEEcCCCCCChHHHHHhhcCCC
Q 024619 48 DYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGT-----G----EEIVAGDDLYGGTDRLLSRVTPKT 117 (265)
Q Consensus 48 ~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~~~~-----g----~~viv~~~~~~~~~~~~~~~~~~~ 117 (265)
.|+.. +...++++++++++|.+.++++++|++|+. ++..+.++ | |+|++..+.|..+.... ...
T Consensus 69 ~y~~~--~~~~~l~~~la~~~~~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~~----~~~ 142 (467)
T 2oqx_A 69 AYSGS--RSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHS----QIN 142 (467)
T ss_dssp CSSSC--HHHHHHHHHHHHHHCCSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHH----HHT
T ss_pred eeccC--chhHHHHHHHHHHhCcCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEecccccccchhhh----hcc
Confidence 45433 567889999999999988888888888875 66666777 8 98887733222222111 222
Q ss_pred CeEEEee------c---------CCCHHHHHhhcC----CCceEEEEecCCCCc-cccc---cHHHHHHHHHHcCCEEEE
Q 024619 118 GVVVKRV------N---------TCDLDEVASAIG----PWTKLVWVESPTNPR-QQIC---DIRKIAEMAHAHGALLLV 174 (265)
Q Consensus 118 g~~~~~~------~---------~~d~~~l~~~~~----~~~~~i~~~~~~np~-G~~~---~l~~i~~~a~~~~~~li~ 174 (265)
|..+... + ..|++++++++. +++++|++++++||+ |.+. ++++|.++|++||+++|+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~ 222 (467)
T 2oqx_A 143 GCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVM 222 (467)
T ss_dssp TCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 3333321 1 127899999986 379999999999998 7764 478999999999999999
Q ss_pred eCCcCC-C----------CCcC-CCC------CCccEEEeccccccccCCCceeeEEEeech
Q 024619 175 DNSIMS-P----------VLSR-PLE------LGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (265)
Q Consensus 175 D~~~~~-~----------~~~~-~~~------~~~di~~~s~sK~~~g~~g~~~G~v~~~~~ 218 (265)
|++++. + ..+. ... ...|+++.|+||+++.| .+|+++.+++
T Consensus 223 D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~---~Gg~~~~~~~ 281 (467)
T 2oqx_A 223 DSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVP---MGGLLCMKDD 281 (467)
T ss_dssp ECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCS---SCEEEEECSG
T ss_pred EchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCC---CceEEEecCh
Confidence 977654 2 1121 111 23678899999999544 2578877765
No 225
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.67 E-value=1.5e-16 Score=139.32 Aligned_cols=156 Identities=12% Similarity=0.021 Sum_probs=105.9
Q ss_pred hHHHHHHHHHhHhCCC--ceEE--ecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCC--CeEEEeecCCC
Q 024619 56 TRDALESLLAKLDKAD--RALC--FTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCD 128 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~--~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~d 128 (265)
..+++++++++++|.+ +.++ +++|++++. ++..++++| .+++..+.|.... ...+... |.+++.++.++
T Consensus 79 ~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~~g-v~~v~~~~~~~~~---~~~~~~~~~g~~~~~v~~~~ 154 (398)
T 2fyf_A 79 LVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKR-SLHLTYGEFSAKF---ASAVSKNPFVGEPIIITSDP 154 (398)
T ss_dssp HHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCSSC-EEEEECSHHHHHH---HHHHHHCTTSCCCEEEECCT
T ss_pred HHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcCCC-eEEEeCCHHHHHH---HHHHHHhCCCCceEEEecCC
Confidence 4789999999999986 3444 455669986 667788887 2233333332111 1112222 66666666542
Q ss_pred HHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCCCccEEEeccccccccCCCc
Q 024619 129 LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDV 208 (265)
Q Consensus 129 ~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g~ 208 (265)
-......+.+++++|++++++||||.+.|+++|.++ +|+++++|++|+.+....... +.|++++|+||++++++|
T Consensus 155 g~~~~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~~-~~di~~~s~sK~~~~~gg- 229 (398)
T 2fyf_A 155 GSAPEPQTDPSVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDIA-ETDAYYFAPQKNFASDGG- 229 (398)
T ss_dssp TCCCCCCCCTTCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCGG-GCSEEEECTTSTTCSCSS-
T ss_pred CCCCCccccCCCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCcc-cCcEEEEecCcccCCCCc-
Confidence 111112356789999999999999999999888887 899999999999876543222 489999999999955434
Q ss_pred eeeEEEeechhHH
Q 024619 209 MAGVLAVKGERLA 221 (265)
Q Consensus 209 ~~G~v~~~~~~~~ 221 (265)
.|+++.+++.+.
T Consensus 230 -~g~l~~~~~~~~ 241 (398)
T 2fyf_A 230 -LWLAIMSPAALS 241 (398)
T ss_dssp -EEEEEECHHHHH
T ss_pred -eEEEEECHHHHH
Confidence 688888775543
No 226
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.58 E-value=5.7e-16 Score=138.85 Aligned_cols=191 Identities=16% Similarity=0.155 Sum_probs=119.9
Q ss_pred cceeEeeccCC--CCCCCCCCCCeeeccccccCCC-CCCCCCccCCCC-ChhHHHHHHHHHhHh--CCCceEEecchHHH
Q 024619 9 VSTLLMNFSNE--FDPYGALSTPLYQTATFKQPSA-TENGPYDYTRSG-NPTRDALESLLAKLD--KADRALCFTSGMAA 82 (265)
Q Consensus 9 ~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~y~~~g-~~~~~~l~~~l~~~~--g~~~~i~~~~g~~a 82 (265)
.+.++|+|.++ ...+|..+|.+..+..-..... .... ..|+... ..+.+++++.++++. +.+.+++++||++|
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~~~~~~~l~~~la~~l~~~~~~~~~~v~f~~sGseA 139 (472)
T 1ohv_A 61 DGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINR-PALGILPPENFVEKLRESLLSVAPKGMSQLITMACGSCS 139 (472)
T ss_dssp TSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCC-CCTTTSCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHHH
T ss_pred CCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhcccccc-cccccccHHHHHHHHHHHHHHhCCCCcCEEEEeCCchhH
Confidence 35679999632 2347886666666543211100 0011 1222222 245777777787776 55678899999999
Q ss_pred HH-HHHHhc--------C-----------------CC---CEEEEcCCCCCChHHHHHhhcCC-----CCeE-----EEe
Q 024619 83 LA-AVTHLL--------G-----------------TG---EEIVAGDDLYGGTDRLLSRVTPK-----TGVV-----VKR 123 (265)
Q Consensus 83 l~-~~~~~~--------~-----------------~g---~~viv~~~~~~~~~~~~~~~~~~-----~g~~-----~~~ 123 (265)
+. ++..+. . +| ++|++.++.|+++.......... .+.. .+.
T Consensus 140 ~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 219 (472)
T 1ohv_A 140 NENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAP 219 (472)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEEC
T ss_pred HHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccC
Confidence 85 444432 1 45 89999999999876543222211 1111 112
Q ss_pred ecC-----------------CCHHHHHhhcCC------CceEEEEecCCCCcccccc----HHHHHHHHHHcCCEEEEeC
Q 024619 124 VNT-----------------CDLDEVASAIGP------WTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDN 176 (265)
Q Consensus 124 ~~~-----------------~d~~~l~~~~~~------~~~~i~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~ 176 (265)
++. .|++++++++.+ ++++|++++.+|++|.+.+ +++|.++|++||+++|+||
T Consensus 220 ~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DE 299 (472)
T 1ohv_A 220 FPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDE 299 (472)
T ss_dssp CCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeC
Confidence 211 147788888865 7899999998899998876 9999999999999999999
Q ss_pred CcC-CCCCcC---CCCCC----ccEEEecccccc
Q 024619 177 SIM-SPVLSR---PLELG----ADIVMHSATKFI 202 (265)
Q Consensus 177 ~~~-~~~~~~---~~~~~----~di~~~s~sK~~ 202 (265)
+|. .+..+. ....+ .|++ |+||++
T Consensus 300 v~~g~g~~g~~~~~~~~gv~~~~Di~--t~sK~~ 331 (472)
T 1ohv_A 300 VQTGGGSTGKFWAHEHWGLDDPADVM--TFSKKM 331 (472)
T ss_dssp TTTTTTTTSSSSGGGGGCCSSCCSEE--EECGGG
T ss_pred cccCCCCCCCchhccccCCCCCCCEE--EEcccc
Confidence 997 333321 11123 6765 778983
No 227
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.57 E-value=6.9e-15 Score=127.66 Aligned_cols=153 Identities=16% Similarity=0.126 Sum_probs=118.6
Q ss_pred hHHHHHHHHHhHhCCC--ceEEe-c-chHHHHH-HHHHhcCC--CCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-
Q 024619 56 TRDALESLLAKLDKAD--RALCF-T-SGMAALA-AVTHLLGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~-~-~g~~al~-~~~~~~~~--g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~- 127 (265)
..++.++.+++++|++ +.+++ + +|+++++ ++..++.+ ||+|++....+.+. .|...++..|.+++.++.+
T Consensus 59 ~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~--~~~~~a~~~G~~~~~~~~~~ 136 (377)
T 3e77_A 59 IINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSA--KAAEEAKKFGTINIVHPKLG 136 (377)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHH--HHHHHHTTTSEEEECSCCCS
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHH--HHHHHHHHhCCceEEeccCC
Confidence 4788999999999986 33444 4 4568886 67777765 89988766655443 3557778889888877653
Q ss_pred ----CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCCCccEEEeccccccc
Q 024619 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIA 203 (265)
Q Consensus 128 ----d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~~ 203 (265)
++++++.++++++++|.+++..|.||.+.|+ +|+++|+++++|.+++.|..+..... .+++++|.+||+
T Consensus 137 ~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~~-~~~~~~s~~K~~- 209 (377)
T 3e77_A 137 SYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVSK-FGVIFAGAQKNV- 209 (377)
T ss_dssp SSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGGG-CSEEEEEGGGTT-
T ss_pred CcCCCCChHHhccCCCccEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCchhh-cCEEEEeccccc-
Confidence 4667777788899999999999999999998 47789999999999999988633322 346889999999
Q ss_pred cCCCceeeEEEeechh
Q 024619 204 GHSDVMAGVLAVKGER 219 (265)
Q Consensus 204 g~~g~~~G~v~~~~~~ 219 (265)
||+|+ |+++.+++.
T Consensus 210 gp~G~--g~l~~~~~~ 223 (377)
T 3e77_A 210 GSAGV--TVVIVRDDL 223 (377)
T ss_dssp SCTTC--EEEEEETTS
T ss_pred CCCcc--EEEEEcHHH
Confidence 79995 888888755
No 228
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.55 E-value=1.2e-14 Score=127.89 Aligned_cols=160 Identities=13% Similarity=0.029 Sum_probs=117.7
Q ss_pred HHHHHHHHHhHhCCCc---eEEecchH-HHHHHHHHhcCC----CCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-
Q 024619 57 RDALESLLAKLDKADR---ALCFTSGM-AALAAVTHLLGT----GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (265)
Q Consensus 57 ~~~l~~~l~~~~g~~~---~i~~~~g~-~al~~~~~~~~~----g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~- 127 (265)
.+.+..++.+++|.++ .+++++++ .++.++++.+++ ++.|+++..+|.+.. ..+...|+++++++..
T Consensus 100 e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~----kAl~l~Gl~p~~v~~~~ 175 (450)
T 3bc8_A 100 TNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCF----KSMVTAGFEPVVIENVL 175 (450)
T ss_dssp HHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHH----HHHHHTTCEEEEECCEE
T ss_pred HHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHH----HHHHHcCCeeEEEEeee
Confidence 5678888888888773 37777776 555555555443 899999999998886 5567789998888642
Q ss_pred -------CHHHHHhhcCC---CceE-EEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc------CCCC-C
Q 024619 128 -------DLDEVASAIGP---WTKL-VWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS------RPLE-L 189 (265)
Q Consensus 128 -------d~~~l~~~~~~---~~~~-i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~------~~~~-~ 189 (265)
|++++++++.+ +..+ |+.+..++.+|.+.|+++|+++|++||+++++|++|+..... .... .
T Consensus 176 ~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~ 255 (450)
T 3bc8_A 176 EGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVG 255 (450)
T ss_dssp ETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHS
T ss_pred cCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhccc
Confidence 89999999853 2344 444444455668899999999999999999999999854322 1112 2
Q ss_pred CccEEEeccccccccCCCceeeEEEeechhHHH
Q 024619 190 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 222 (265)
Q Consensus 190 ~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~~~ 222 (265)
+.|+++.|+|||+.+|.+ ++++..++....+
T Consensus 256 ~AD~~v~S~HK~l~a~~~--~~~l~~rd~~~~~ 286 (450)
T 3bc8_A 256 RIDAFVQSLDKNFMVPVG--GAIIAGFNEPFIQ 286 (450)
T ss_dssp CCCEEEEEHHHHHSCCSS--CEEEEESCHHHHH
T ss_pred CCCEEEECCccCCCchhc--cEEEEecCHHHHH
Confidence 689999999999988765 6777777655443
No 229
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.55 E-value=6.6e-15 Score=128.34 Aligned_cols=153 Identities=12% Similarity=0.022 Sum_probs=116.7
Q ss_pred hhHHHHHHHHHhHhCCC--c-eEEe-cchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC--
Q 024619 55 PTRDALESLLAKLDKAD--R-ALCF-TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~-~i~~-~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (265)
...++.++.+++++|++ + ++++ .+|+++++ ++..++++||+|++..-++.+. .|...++..| ++..++.+
T Consensus 72 ~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~--~~~~~a~~~G-~v~~v~~~~~ 148 (386)
T 3qm2_A 72 QVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAA--SAIKEAKKYC-APQIIDAKIT 148 (386)
T ss_dssp -CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHH--HHHHHHTTTS-EEEEEECEEE
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHH--HHHHHHHHhC-CeEEEecCcc
Confidence 34788999999999986 2 4443 46679986 7788899999987544444333 3445667788 77777654
Q ss_pred ------CHHHHHhhcCCCceEEEEecCCCCcccc-ccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCCCccEEEecccc
Q 024619 128 ------DLDEVASAIGPWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATK 200 (265)
Q Consensus 128 ------d~~~l~~~~~~~~~~i~~~~~~np~G~~-~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK 200 (265)
+++++++++++++++|++++..|.||.+ .|+++|. +|+++++|.+++.|..+..... .|+.++|.+|
T Consensus 149 ~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~-~~~~~~s~hK 222 (386)
T 3qm2_A 149 VDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSR-YGVIYAGAQK 222 (386)
T ss_dssp ETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGG-CSEEEEETTT
T ss_pred cCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCccc-cCEEEEeccc
Confidence 4577788888999999999999999996 8898885 7999999999999988633322 2467799999
Q ss_pred ccccCCCceeeEEEeechh
Q 024619 201 FIAGHSDVMAGVLAVKGER 219 (265)
Q Consensus 201 ~~~g~~g~~~G~v~~~~~~ 219 (265)
|+ ||+|+ |+++.+++.
T Consensus 223 ~l-GP~G~--g~l~v~~~~ 238 (386)
T 3qm2_A 223 NI-GPAGL--TLVIVREDL 238 (386)
T ss_dssp TT-CCTTE--EEEEEEGGG
T ss_pred cc-CCCcc--EEEEECHHH
Confidence 99 79995 888888765
No 230
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.52 E-value=3e-14 Score=124.47 Aligned_cols=154 Identities=10% Similarity=0.038 Sum_probs=109.9
Q ss_pred HHHHhHhCCC---ceEEecchH-HHHHHHHHhcCC----CCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC------
Q 024619 62 SLLAKLDKAD---RALCFTSGM-AALAAVTHLLGT----GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (265)
Q Consensus 62 ~~l~~~~g~~---~~i~~~~g~-~al~~~~~~~~~----g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~------ 127 (265)
++++++ |.. ..+++++++ ..+.++++.+++ +|.|+++..+|-+.. ..+...|+++++++..
T Consensus 124 d~L~~~-G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~----kAliL~Gl~Pv~V~p~~d~~~~ 198 (501)
T 3hl2_A 124 DIIKLA-GVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCF----KSMITAGFEPVVIENVLEGDEL 198 (501)
T ss_dssp HHHHHT-TCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHH----HHHHHTTCEEEEECEEEETTEE
T ss_pred HHHHHc-CCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHH----HHHHHcCCeEEEEeeeeccccc
Confidence 334444 765 356666666 445666776664 499999999998887 5556789999998741
Q ss_pred --CHHHHHhhcCC---C-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCc------CCCCCC-ccEE
Q 024619 128 --DLDEVASAIGP---W-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS------RPLELG-ADIV 194 (265)
Q Consensus 128 --d~~~l~~~~~~---~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~------~~~~~~-~di~ 194 (265)
|++++++++.+ + ..+|+.+.++|-.|.+.|+++|+++|++||+++++|++|+.-... .....| .|++
T Consensus 199 ~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~v 278 (501)
T 3hl2_A 199 RTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAF 278 (501)
T ss_dssp EECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEE
T ss_pred CCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEE
Confidence 78999988853 2 334444555554456689999999999999999999999865422 223446 9999
Q ss_pred EeccccccccCCCceeeEEEeechhHHH
Q 024619 195 MHSATKFIAGHSDVMAGVLAVKGERLAK 222 (265)
Q Consensus 195 ~~s~sK~~~g~~g~~~G~v~~~~~~~~~ 222 (265)
+.|.+|++..|-| ++++..+++...+
T Consensus 279 VqS~HK~llvpIG--G~ii~~~d~e~l~ 304 (501)
T 3hl2_A 279 VQSLDKNFMVPVG--GAIIAGFNDSFIQ 304 (501)
T ss_dssp EEEHHHHHCCCSS--CEEEEESCHHHHH
T ss_pred EecccccceeecC--ceEEEeCCHHHHH
Confidence 9999999987754 4566667765544
No 231
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.45 E-value=2.9e-13 Score=120.08 Aligned_cols=202 Identities=18% Similarity=0.182 Sum_probs=135.5
Q ss_pred CcceeEeeccC--CCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHh-CCCceEEecchHHHHH
Q 024619 8 GVSTLLMNFSN--EFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALA 84 (265)
Q Consensus 8 ~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-g~~~~i~~~~g~~al~ 84 (265)
..+.++|+|.+ +...+|...|.+..+..-+... ...+.. .++...++++.+++.+ +.+.+.+++||++|..
T Consensus 84 ~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~-----~~~~~~-~~~~~~~lae~l~~~~p~~~~v~f~~SGsEA~e 157 (454)
T 4ao9_A 84 ADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQG-----GINLTG-HNLLEGRLARLICERFPQIEQLRFTNSGTEANL 157 (454)
T ss_dssp TTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHT-----CSCCCS-EESSHHHHHHHHHHHSTTCSEEEEESSHHHHHH
T ss_pred CCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhc-----CCCccC-CcHHHHHHHHHHHHhCCCCCEEEEeCchHHHHH
Confidence 34578899853 3555888887777765432221 111111 1234677888888887 4567888899999885
Q ss_pred -HHHHh--cCCCCEEEEcCCCCCChHHHHHhh--cCCCCeEEEeecCCCHHHHHhhcC---CCceEEEEecCCCCccccc
Q 024619 85 -AVTHL--LGTGEEIVAGDDLYGGTDRLLSRV--TPKTGVVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQIC 156 (265)
Q Consensus 85 -~~~~~--~~~g~~viv~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~d~~~l~~~~~---~~~~~i~~~~~~np~G~~~ 156 (265)
++... ....++|+..+.+|+......... ..........+|..|.+.+++.+. +++++|+++......|.+.
T Consensus 158 ~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~ 237 (454)
T 4ao9_A 158 MALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYNDAQTARAQIERHGPEIAVVLVEPMQGASGCIP 237 (454)
T ss_dssp HHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTTCHHHHHHHHHHTGGGEEEEEECSEESTTTCEE
T ss_pred HHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCCchHHHHHHHHhhcCCceEEEEeccccCCCCccC
Confidence 44332 234578888888888764211000 011223556677789998888875 4688999999988889887
Q ss_pred c----HHHHHHHHHHcCCEEEEeCCcCCCCCcC-----CCCCCccEEEeccccccccCCCceeeEEEeechhH
Q 024619 157 D----IRKIAEMAHAHGALLLVDNSIMSPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 157 ~----l~~i~~~a~~~~~~li~D~~~~~~~~~~-----~~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
+ +++|.++|++||+++|+||++. |..+. .....+|++ +++|.++| |+..|.+.++++.+
T Consensus 238 p~~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv~PDi~--t~gK~lgg--G~Piga~~~~~ei~ 305 (454)
T 4ao9_A 238 GQPDFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLGIRSDLT--TLGKYIGG--GMSFGAFGGRADVM 305 (454)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHTCCCSEE--EEEGGGGT--TSSCEEEEECHHHH
T ss_pred CchhhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccCCCCcEE--EeccccCC--CCcceeeeeHHHHH
Confidence 6 8999999999999999999986 43321 123357887 46898854 45678887777544
No 232
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.41 E-value=3.4e-13 Score=116.51 Aligned_cols=148 Identities=14% Similarity=0.084 Sum_probs=107.6
Q ss_pred hHHHHHHHHHhHhCCC--ceEEe-cch-HHHHH-HHHHhcCCCCEEE-EcCCCCCChHHHHHhhcCCCCeEEEeecCC--
Q 024619 56 TRDALESLLAKLDKAD--RALCF-TSG-MAALA-AVTHLLGTGEEIV-AGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~-~~g-~~al~-~~~~~~~~g~~vi-v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (265)
..++.++.+++++|++ ..+++ ++| +++++ ++..++ +||++. +....| + ..|...++..|+++..++.+
T Consensus 51 ~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~-~--~~~~~~a~~~G~~v~~~~~~~~ 126 (361)
T 3m5u_A 51 VHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVW-T--KKAIKEAQILGVNVKTVASSEE 126 (361)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHH-H--HHHHHHHHHTTCCEEEEEECTT
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHH-H--HHHHHHHHHcCCceEEEecccC
Confidence 4888999999999984 24444 555 58886 677777 788652 222222 2 22334556677777776532
Q ss_pred -----CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCCcCCCCCCccEEEecccccc
Q 024619 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFI 202 (265)
Q Consensus 128 -----d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~~~~~~~~~di~~~s~sK~~ 202 (265)
++++ + +++++++|.+++..|.+|.+.|. +++ +|+++++|.+++.|..+.... +.|++++|.+||+
T Consensus 127 g~~~~~~~~--~-l~~~t~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~~-~~d~~~~s~~K~~ 196 (361)
T 3m5u_A 127 SNFDHIPRV--E-FSDNADYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDFS-NIALFYGGVQKNA 196 (361)
T ss_dssp TTSCSCCCC--C-CCTTSSEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCCT-TEEEEEEETTTTS
T ss_pred cCCCcCChh--h-cCCCCCEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCcc-cCCEEEEechhcc
Confidence 3444 4 78899999999999999998662 333 499999999999998874444 4799999999999
Q ss_pred ccCCCceeeEEEeechhH
Q 024619 203 AGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 203 ~g~~g~~~G~v~~~~~~~ 220 (265)
||+|+ |+++.+++.+
T Consensus 197 -gp~G~--g~l~~~~~~~ 211 (361)
T 3m5u_A 197 -GISGL--SCIFIRKDML 211 (361)
T ss_dssp -SCTTC--EEEEEEHHHH
T ss_pred -CCCcc--EEEEEcHHHH
Confidence 79995 8888887665
No 233
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.37 E-value=4.3e-12 Score=110.57 Aligned_cols=151 Identities=21% Similarity=0.224 Sum_probs=103.4
Q ss_pred HHHHhHhCCCc-----eEEecchHHHH-HHHHHhcCCCCEEEEcCCCCCChHHHHH----hhcCCCCeEEEee--cC---
Q 024619 62 SLLAKLDKADR-----ALCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLS----RVTPKTGVVVKRV--NT--- 126 (265)
Q Consensus 62 ~~l~~~~g~~~-----~i~~~~g~~al-~~~~~~~~~g~~viv~~~~~~~~~~~~~----~~~~~~g~~~~~~--~~--- 126 (265)
++.+++||++. .+-..||++|. .+..++++|||+|+-.+..+.+...... .-....|.-...+ .+
T Consensus 107 ~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~ 186 (490)
T 3ou5_A 107 RRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPK 186 (490)
T ss_dssp HHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETT
T ss_pred HHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCC
Confidence 45678899984 47777999776 5889999999999988877665542210 0011122222222 11
Q ss_pred ---CCHHHHHhhcC-CCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcC-----CCCCcCCCCCCccEEEec
Q 024619 127 ---CDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM-----SPVLSRPLELGADIVMHS 197 (265)
Q Consensus 127 ---~d~~~l~~~~~-~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~-----~~~~~~~~~~~~di~~~s 197 (265)
.|.+++++... .++++|+.-...+| ...|.+++.++|++.|+++++|.+|- .|.+++|... .|++++|
T Consensus 187 t~~IDyd~~~~~A~~~kPklIi~G~SaY~--r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~-ADvVTtT 263 (490)
T 3ou5_A 187 TGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH-ADIVTTT 263 (490)
T ss_dssp TTEECHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-CSEEEEE
T ss_pred CCcccHHHHHHHHhhcCCCeEEECCccCc--cccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc-ceEEecc
Confidence 27888888765 57999887665554 46799999999999999999999994 5666788877 8999999
Q ss_pred cccccccCCCceeeEEEeech
Q 024619 198 ATKFIAGHSDVMAGVLAVKGE 218 (265)
Q Consensus 198 ~sK~~~g~~g~~~G~v~~~~~ 218 (265)
.||+|.||. +|+|.+++.
T Consensus 264 THKTLrGPr---GG~Il~~~~ 281 (490)
T 3ou5_A 264 THKTLRGAR---SGLIFYRKG 281 (490)
T ss_dssp SSSTTCSCS---CEEEEEECS
T ss_pred ccccccCCC---ceEEEeccc
Confidence 999999986 699998863
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.19 E-value=2.8e-10 Score=101.13 Aligned_cols=233 Identities=17% Similarity=0.188 Sum_probs=139.3
Q ss_pred cceeEeeccC--CCCCCCCCCCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhCC---CceEEecchHHHH
Q 024619 9 VSTLLMNFSN--EFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA---DRALCFTSGMAAL 83 (265)
Q Consensus 9 ~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~---~~~i~~~~g~~al 83 (265)
.+.++|+|.+ +...+|...|.+..+..-+.... ....+....++...++.+.+.++... +.+.+++||++|+
T Consensus 62 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~---~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~ 138 (456)
T 4atq_A 62 DGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHF---THTCFMVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAV 138 (456)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHC---SCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHH
T ss_pred CCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhc---cCcccCccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHH
Confidence 4567888854 35668988887777654322211 11111111224466788889888743 3577888999998
Q ss_pred HHHHHh---cCCCCEEEEcCCCCCChHHHHHhhcCC----------CCeEEEeecCC-----------CHH-------HH
Q 024619 84 AAVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTPK----------TGVVVKRVNTC-----------DLD-------EV 132 (265)
Q Consensus 84 ~~~~~~---~~~g~~viv~~~~~~~~~~~~~~~~~~----------~g~~~~~~~~~-----------d~~-------~l 132 (265)
...+.+ ....++|+....+|++........... ....+..+|.+ +.+ .+
T Consensus 139 e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (456)
T 4atq_A 139 ENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMI 218 (456)
T ss_dssp HHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHH
Confidence 633332 334578888888888865332121111 11123333321 122 22
Q ss_pred HhhcC-CCceEEEEecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-CCCc-----CCCCCCccEEEeccccc
Q 024619 133 ASAIG-PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS-----RPLELGADIVMHSATKF 201 (265)
Q Consensus 133 ~~~~~-~~~~~i~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~~-~~~~-----~~~~~~~di~~~s~sK~ 201 (265)
++.+. +++.+|+++..+...|.+.+ +++|.++|++||+++|+||++.. |..+ ......+||++. +|.
T Consensus 219 e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~--gK~ 296 (456)
T 4atq_A 219 EKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITM--AKG 296 (456)
T ss_dssp HHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEE--CGG
T ss_pred HHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhh--hhc
Confidence 23333 46889999999887887753 89999999999999999999853 3332 222345899854 798
Q ss_pred cccCCCceeeEEEeechhHHHHHHHHHHhccCCCChhHHHHHHhccCc
Q 024619 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT 249 (265)
Q Consensus 202 ~~g~~g~~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 249 (265)
++| |+..|.++.+++.. +.+.......+..-+|..++..+..|+.
T Consensus 297 lgg--g~P~~av~~~~~i~-~~~~~~~~~~Tf~gnpla~aaala~L~~ 341 (456)
T 4atq_A 297 IAG--GLPLSAITGRADLL-DAVHPGGLGGTYGGNPVACAAALAAIDT 341 (456)
T ss_dssp GGT--TSSCEEEEEEHHHH-TTSCTTSSCCSSSSCHHHHHHHHHHHHH
T ss_pred ccC--cCCceeeEecHHHH-hcccccCCCCCCCCChHHHHhhHHHHHH
Confidence 853 46788888877543 3222222233344456666665555543
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.10 E-value=1.8e-09 Score=96.27 Aligned_cols=205 Identities=14% Similarity=0.095 Sum_probs=126.6
Q ss_pred CcceeEeeccC--CCCCCCCCCCCeeeccccccCCCCCCCCCccCCC-C--ChhHHHHHHHHHhHhCC--CceEEecchH
Q 024619 8 GVSTLLMNFSN--EFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-G--NPTRDALESLLAKLDKA--DRALCFTSGM 80 (265)
Q Consensus 8 ~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g--~~~~~~l~~~l~~~~g~--~~~i~~~~g~ 80 (265)
..+.++|+|.+ ++..+|...|.+..+..-+.... ..|... + ++...++.++|.++... +.+.+.+||+
T Consensus 64 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l-----~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGs 138 (473)
T 4e3q_A 64 VNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERF-----PGYHAFFGRMSDQTVMLSEKLVEVSPFDSGRVFYTNSGS 138 (473)
T ss_dssp TTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHC-----CCCCCCTTEEEHHHHHHHHHHHHHSSCSSCEEEEESSHH
T ss_pred CCCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhc-----ccccccccccCHHHHHHHHHHHhhCCCCccEEEEeCchH
Confidence 34578899854 35558888877776654322211 112222 2 24467788999988753 4688889999
Q ss_pred HHHHHHHHhc--------CC-CCEEEEcCCCCCChHHHHHhhcC----------CCCeEEEeecC--------CC-----
Q 024619 81 AALAAVTHLL--------GT-GEEIVAGDDLYGGTDRLLSRVTP----------KTGVVVKRVNT--------CD----- 128 (265)
Q Consensus 81 ~al~~~~~~~--------~~-g~~viv~~~~~~~~~~~~~~~~~----------~~g~~~~~~~~--------~d----- 128 (265)
+|+...+.+. ++ ..+|+....+|++.......... ..+...+..|. ..
T Consensus 139 EA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 218 (473)
T 4e3q_A 139 EANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFV 218 (473)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHH
Confidence 9986333321 23 35688888888875432211111 11222222221 01
Q ss_pred ---HHHHHhhc----CCCceEEEEecCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CCCCcC-----CCCCCc
Q 024619 129 ---LDEVASAI----GPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGA 191 (265)
Q Consensus 129 ---~~~l~~~~----~~~~~~i~~~~~~np~G~~~~----l~~i~~~a~~~~~~li~D~~~~-~~~~~~-----~~~~~~ 191 (265)
.+++++.+ .+++++|+++....-.|.+.+ +++|.++|++||+++|.||++. .|-.+. .....+
T Consensus 219 ~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~P 298 (473)
T 4e3q_A 219 ARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTP 298 (473)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCC
T ss_pred HHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCC
Confidence 22333333 246889999999887787743 8999999999999999999985 333332 223458
Q ss_pred cEEEeccccccccCCCceeeEEEeechhH
Q 024619 192 DIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (265)
Q Consensus 192 di~~~s~sK~~~g~~g~~~G~v~~~~~~~ 220 (265)
|+++ ++|.+++ +.+..|.++++++..
T Consensus 299 Di~t--~~K~l~g-G~~Pl~av~~~~~i~ 324 (473)
T 4e3q_A 299 DAII--SSKNLTA-GFFPMGAVILGPELS 324 (473)
T ss_dssp SEEE--ECGGGGT-TSSCCEEEEECHHHH
T ss_pred ChHH--hcccccC-CCCCcccccccHHHH
Confidence 9885 5899843 446688888877544
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.04 E-value=2.7e-10 Score=108.21 Aligned_cols=202 Identities=12% Similarity=0.039 Sum_probs=125.1
Q ss_pred eEeeccC--CCCCCCCC-CCCeeeccccccCCCCCCCCCccCCCCChhHHHHHHHHHhHhC---CCceEEecchHHHHH-
Q 024619 12 LLMNFSN--EFDPYGAL-STPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAALA- 84 (265)
Q Consensus 12 ~~~~~~~--~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g---~~~~i~~~~g~~al~- 84 (265)
++++|.+ ++..+|.. .|.+..+...+.... ....+....++...+++++|+++.+ .+.+++++||++|+.
T Consensus 381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l---~h~~~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~ 457 (831)
T 4a0g_A 381 QQFDACASWWTQGPDPTFQAELAREMGYTAARF---GHVMFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEI 457 (831)
T ss_dssp EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHH---SSCCCTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHH
T ss_pred heeeecccHhhcCCCCCCCHHHHHHHHHHHhhc---ccccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHH
Confidence 7888853 47889998 666666654332211 1111111234567799999999986 356888999999985
Q ss_pred HHHHhc-----CC------------CCEEEEcCCCCCChHHHHHhhcCCC------------CeE---------------
Q 024619 85 AVTHLL-----GT------------GEEIVAGDDLYGGTDRLLSRVTPKT------------GVV--------------- 120 (265)
Q Consensus 85 ~~~~~~-----~~------------g~~viv~~~~~~~~~~~~~~~~~~~------------g~~--------------- 120 (265)
++.... +. ..+||....+|++.....-.+.... +..
T Consensus 458 AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 537 (831)
T 4a0g_A 458 ALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSW 537 (831)
T ss_dssp HHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEE
T ss_pred HHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCce
Confidence 332221 11 2368888888876543322222110 100
Q ss_pred EEeecC------------CC------------------HHHHHhhcC--------CCceEEEEecC-CCCcccccc----
Q 024619 121 VKRVNT------------CD------------------LDEVASAIG--------PWTKLVWVESP-TNPRQQICD---- 157 (265)
Q Consensus 121 ~~~~~~------------~d------------------~~~l~~~~~--------~~~~~i~~~~~-~np~G~~~~---- 157 (265)
.+.+|. .+ .+.+++.+. +++++|+++.. ++..|.+.+
T Consensus 538 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~ 617 (831)
T 4a0g_A 538 NISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLF 617 (831)
T ss_dssp EEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHH
T ss_pred EecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHH
Confidence 111110 11 145666653 35789999986 888887754
Q ss_pred HHHHHHHHHHcCCEEEEeCCcC-CCCCcCC-----CCCCccEEEeccccccccCCCceeeEEEeechh
Q 024619 158 IRKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGER 219 (265)
Q Consensus 158 l~~i~~~a~~~~~~li~D~~~~-~~~~~~~-----~~~~~di~~~s~sK~~~g~~g~~~G~v~~~~~~ 219 (265)
+++|.++|++||+++|+||++. .|..+.. .....|++ +++|.++| +.+..|+++++++.
T Consensus 618 L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDii--tlsK~L~g-G~~Plgav~~~~~i 682 (831)
T 4a0g_A 618 QRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIA--CFAKLLTG-GMVPLAVTLATDAV 682 (831)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEE--EECGGGGT-TSSCCEEEEECHHH
T ss_pred HHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEE--EEeccccc-CccCcEEEEECHHH
Confidence 8999999999999999999985 3333321 12356876 58999954 22678999887754
No 237
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=88.75 E-value=2 Score=29.21 Aligned_cols=90 Identities=22% Similarity=0.199 Sum_probs=57.4
Q ss_pred ceEEecchHHHHHHHHHhcCCC-CEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCC
Q 024619 72 RALCFTSGMAALAAVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (265)
Q Consensus 72 ~~i~~~~g~~al~~~~~~~~~g-~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~n 150 (265)
.++++..|..+..++..+.+.| ..|++.+..- ...... ...+.+....+..+.+.+.+.+. +..+|+.+.+..
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~----~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~-~~d~vi~~~~~~ 80 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTSSNYSVTVADHDL----AALAVL-NRMGVATKQVDAKDEAGLAKALG-GFDAVISAAPFF 80 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH----HHHHHH-HTTTCEEEECCTTCHHHHHHHTT-TCSEEEECSCGG
T ss_pred eEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH----HHHHHH-HhCCCcEEEecCCCHHHHHHHHc-CCCEEEECCCch
Confidence 3556666666666666666667 6666544421 111122 25678888888889898888775 566776655422
Q ss_pred CccccccHHHHHHHHHHcCCEEE
Q 024619 151 PRQQICDIRKIAEMAHAHGALLL 173 (265)
Q Consensus 151 p~G~~~~l~~i~~~a~~~~~~li 173 (265)
....+.+.|.+.|+..+
T Consensus 81 ------~~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 81 ------LTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp ------GHHHHHHHHHHTTCEEE
T ss_pred ------hhHHHHHHHHHhCCCEE
Confidence 23778888999888754
No 238
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=81.68 E-value=3.1 Score=36.30 Aligned_cols=93 Identities=14% Similarity=0.050 Sum_probs=67.4
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC--CCHHHHHhhcCCCceEEEEecCCCCccccccH
Q 024619 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (265)
Q Consensus 81 ~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l 158 (265)
+++..+..++++-+.+.+++|..+.-...|..+.+...+++.-=+. .+++++++.+..+..=++..-+ |..|.+.+.
T Consensus 277 eai~~~~~~l~~y~i~~iEdPl~~dD~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ikv-~qiGGitea 355 (436)
T 2al1_A 277 QLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALLLKV-NQIGTLSES 355 (436)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTTCCSEEEECH-HHHCCHHHH
T ss_pred HHHHHHHHHHHhCCcEEEECCCCCcCHHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhCCCCEEEech-hhcCCHHHH
Confidence 4444556666666788899998877777777777776676654443 3789999988765443333334 557999999
Q ss_pred HHHHHHHHHcCCEEEE
Q 024619 159 RKIAEMAHAHGALLLV 174 (265)
Q Consensus 159 ~~i~~~a~~~~~~li~ 174 (265)
.+++++|+++|+.+++
T Consensus 356 ~~ia~lA~~~g~~~~~ 371 (436)
T 2al1_A 356 IKAAQDSFAAGWGVMV 371 (436)
T ss_dssp HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCeEEE
Confidence 9999999999997755
No 239
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=80.03 E-value=3.4 Score=35.97 Aligned_cols=94 Identities=12% Similarity=-0.013 Sum_probs=67.2
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCC-eEEEeecC--CCHHHHHhhcCCCceEEEEecCCCCccccc
Q 024619 80 MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG-VVVKRVNT--CDLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (265)
Q Consensus 80 ~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g-~~~~~~~~--~d~~~l~~~~~~~~~~i~~~~~~np~G~~~ 156 (265)
.+++.....++++-..+.+++|....-...|..+.+..+ ++++-=+. .+++.+++.+..+..=+++.-+ |-.|.+.
T Consensus 282 ~elid~y~~lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIKv-nqiGGIT 360 (441)
T 3qtp_A 282 DGLIAEYVDYGKHYPIASIEDPFAEDDWAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSVLIKV-NQIGTLT 360 (441)
T ss_dssp HHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECG-GGTCCHH
T ss_pred HHHHHHHHHHhhhcceeeecCCCChHHHHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEEEecc-cccccHH
Confidence 355566677777667888999988777777777766666 65544333 4789999888755433333334 4578999
Q ss_pred cHHHHHHHHHHcCCEEEE
Q 024619 157 DIRKIAEMAHAHGALLLV 174 (265)
Q Consensus 157 ~l~~i~~~a~~~~~~li~ 174 (265)
+..+++++|+++|..+++
T Consensus 361 Ealkaa~lA~~~G~~vmv 378 (441)
T 3qtp_A 361 ETFKTIKMAQEKGWGVMA 378 (441)
T ss_dssp HHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHcCCeEEE
Confidence 999999999999998765
No 240
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=79.61 E-value=13 Score=30.64 Aligned_cols=98 Identities=13% Similarity=0.120 Sum_probs=56.3
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCC------CCeEEEeecCCCHHHHHhhcCCCceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK------TGVVVKRVNTCDLDEVASAIGPWTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~d~~~l~~~~~~~~~~i 143 (265)
..+++++|+.-+ .++..+++.|..|++..-.-............. .+++++..|+.|.+.+.+++. ++.+|
T Consensus 26 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~V 104 (351)
T 3ruf_A 26 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-GVDHV 104 (351)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-TCSEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-CCCEE
Confidence 355666655444 567777788887765332211112111122111 578889999999999998886 56666
Q ss_pred EEecCCC-Cccccc-----------cHHHHHHHHHHcCC
Q 024619 144 WVESPTN-PRQQIC-----------DIRKIAEMAHAHGA 170 (265)
Q Consensus 144 ~~~~~~n-p~G~~~-----------~l~~i~~~a~~~~~ 170 (265)
+-+.... +..... -...+++.|++.++
T Consensus 105 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 143 (351)
T 3ruf_A 105 LHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV 143 (351)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred EECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5443321 111111 13568899999875
No 241
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=78.58 E-value=13 Score=28.28 Aligned_cols=91 Identities=16% Similarity=0.125 Sum_probs=54.3
Q ss_pred eEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCC
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~n 150 (265)
.+++++|+..+ .++..+.+.|..|.+..-.-... .. ...+++++..|+.|.+.+.+++. ++.+|+-+....
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~-~~~~~~~~~~Dl~d~~~~~~~~~-~~d~vi~~a~~~ 78 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI-----KI-ENEHLKVKKADVSSLDEVCEVCK-GADAVISAFNPG 78 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC-----CC-CCTTEEEECCCTTCHHHHHHHHT-TCSEEEECCCC-
T ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc-----hh-ccCceEEEEecCCCHHHHHHHhc-CCCEEEEeCcCC
Confidence 35555555444 57777888888877644321111 11 12578888889999999998886 355555433221
Q ss_pred Ccc-cc-----ccHHHHHHHHHHcCC
Q 024619 151 PRQ-QI-----CDIRKIAEMAHAHGA 170 (265)
Q Consensus 151 p~G-~~-----~~l~~i~~~a~~~~~ 170 (265)
... .. .-...+++.|++.++
T Consensus 79 ~~~~~~~~~n~~~~~~l~~~~~~~~~ 104 (227)
T 3dhn_A 79 WNNPDIYDETIKVYLTIIDGVKKAGV 104 (227)
T ss_dssp -----CCSHHHHHHHHHHHHHHHTTC
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhCC
Confidence 111 11 224778899999876
No 242
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=78.13 E-value=3.9 Score=31.52 Aligned_cols=43 Identities=12% Similarity=0.147 Sum_probs=33.6
Q ss_pred HHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEE
Q 024619 132 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (265)
Q Consensus 132 l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~ 174 (265)
|.++..-.+.+|+.+-..|..|....+.++.++|++||+.++.
T Consensus 152 LarLAGl~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 152 LSTLAGLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp HHHHTTSCSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred HHHHcCCCceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 3333344567777776668899999999999999999998764
No 243
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=77.77 E-value=7 Score=31.20 Aligned_cols=90 Identities=17% Similarity=0.231 Sum_probs=53.0
Q ss_pred EEecchHHHH--HHHHHhcCC--CCEEEE-cCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecC
Q 024619 74 LCFTSGMAAL--AAVTHLLGT--GEEIVA-GDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (265)
Q Consensus 74 i~~~~g~~al--~~~~~~~~~--g~~viv-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~ 148 (265)
+++++|+..+ .++..+.+. |.+|.+ .... .... .. ...+++++..|+.|.+.+.+++. ++..|+.+..
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~-~~~~----~l-~~~~~~~~~~D~~d~~~l~~~~~-~~d~vi~~a~ 75 (287)
T 2jl1_A 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNV-EKAS----TL-ADQGVEVRHGDYNQPESLQKAFA-GVSKLLFISG 75 (287)
T ss_dssp EEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCT-TTTH----HH-HHTTCEEEECCTTCHHHHHHHTT-TCSEEEECCC
T ss_pred EEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCH-HHHh----HH-hhcCCeEEEeccCCHHHHHHHHh-cCCEEEEcCC
Confidence 5666665444 466777776 766654 3321 1111 11 12467888889999999998876 4566654443
Q ss_pred CCCcc--ccccHHHHHHHHHHcCC
Q 024619 149 TNPRQ--QICDIRKIAEMAHAHGA 170 (265)
Q Consensus 149 ~np~G--~~~~l~~i~~~a~~~~~ 170 (265)
.++.. .+.-...+++.|++.++
T Consensus 76 ~~~~~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 76 PHYDNTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcCchHHHHHHHHHHHHHHHcCC
Confidence 32221 12234678888888876
No 244
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=76.25 E-value=4.7 Score=35.19 Aligned_cols=93 Identities=11% Similarity=0.059 Sum_probs=66.6
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC--CCHHHHHhhcCCCceEEEEecCCCCccccccH
Q 024619 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (265)
Q Consensus 81 ~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l 158 (265)
+++..+..++++-+.+.+++|....-...|..+.+...+++.-=+. .+++++++.+..+..=++..-+ |..|.+.+.
T Consensus 274 e~~~~~~~ll~~y~i~~IEdPl~~dD~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iKv-~qiGGitea 352 (439)
T 2akz_A 274 QLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKV-NQIGSVTEA 352 (439)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEEECH-HHHCCHHHH
T ss_pred HHHHHHHHHHHhCCCcEEECCCCcccHHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEEech-hhcCCHHHH
Confidence 4444555566666788899998877777776766666677754443 4789999988766443333334 557999999
Q ss_pred HHHHHHHHHcCCEEEE
Q 024619 159 RKIAEMAHAHGALLLV 174 (265)
Q Consensus 159 ~~i~~~a~~~~~~li~ 174 (265)
.+++++|+++|+.+++
T Consensus 353 ~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 353 IQACKLAQENGWGVMV 368 (439)
T ss_dssp HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHCCCeEEe
Confidence 9999999999998765
No 245
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=75.97 E-value=7.6 Score=33.72 Aligned_cols=92 Identities=12% Similarity=0.039 Sum_probs=64.0
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCC--eEEEeec--CCCHHHHHhhcCCCc-eEEEEecCCCCcccc
Q 024619 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVN--TCDLDEVASAIGPWT-KLVWVESPTNPRQQI 155 (265)
Q Consensus 81 ~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g--~~~~~~~--~~d~~~l~~~~~~~~-~~i~~~~~~np~G~~ 155 (265)
+++..+..++++-+.+.+++|........|..+.+..+ +.+.-=+ +.+++.+++.+..+. .+|.+ -+ |..|.+
T Consensus 267 eai~~~~~ll~~y~i~~IEdPl~~dD~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~i-Kv-~~iGGi 344 (428)
T 3tqp_A 267 EMIDRLTEWTKKYPVISIEDGLSENDWAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILV-KL-NQIGTL 344 (428)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEE-CH-HHHCCH
T ss_pred HHHHHHHHHHhhcccceEeCCCCcccHHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEe-cc-cccCCH
Confidence 56666666666667888999987766666666655555 4332222 237888888886553 44433 33 557999
Q ss_pred ccHHHHHHHHHHcCCEEEE
Q 024619 156 CDIRKIAEMAHAHGALLLV 174 (265)
Q Consensus 156 ~~l~~i~~~a~~~~~~li~ 174 (265)
.+..+++++|+++|+.+++
T Consensus 345 Tealkia~lA~~~G~~~~v 363 (428)
T 3tqp_A 345 TETLATVGLAKSNKYGVII 363 (428)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCeEEE
Confidence 9999999999999999665
No 246
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=75.57 E-value=12 Score=30.13 Aligned_cols=96 Identities=13% Similarity=0.081 Sum_probs=55.7
Q ss_pred EEecchH--HHHHHHHHhcCCCCEEEE-cCCCCCC---hHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEec
Q 024619 74 LCFTSGM--AALAAVTHLLGTGEEIVA-GDDLYGG---TDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVES 147 (265)
Q Consensus 74 i~~~~g~--~al~~~~~~~~~g~~viv-~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~ 147 (265)
+++++|+ -+-.++..+++.|..|.+ ....... ....+.. ....+++++..|+.|.+.+.+++.. ...|+.+.
T Consensus 7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~l~~~~~~-~d~vi~~a 84 (313)
T 1qyd_A 7 VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLY-FKQLGAKLIEASLDDHQRLVDALKQ-VDVVISAL 84 (313)
T ss_dssp EEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHH-HHTTTCEEECCCSSCHHHHHHHHTT-CSEEEECC
T ss_pred EEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHH-HHhCCeEEEeCCCCCHHHHHHHHhC-CCEEEECC
Confidence 4555544 444566667777766654 4432211 1111111 1345788999999999999988864 55555433
Q ss_pred CCC-CccccccHHHHHHHHHHcC-CE
Q 024619 148 PTN-PRQQICDIRKIAEMAHAHG-AL 171 (265)
Q Consensus 148 ~~n-p~G~~~~l~~i~~~a~~~~-~~ 171 (265)
... +...+.....+++.|++.| +-
T Consensus 85 ~~~~~~~~~~~~~~l~~aa~~~g~v~ 110 (313)
T 1qyd_A 85 AGGVLSHHILEQLKLVEAIKEAGNIK 110 (313)
T ss_dssp CCSSSSTTTTTHHHHHHHHHHSCCCS
T ss_pred ccccchhhHHHHHHHHHHHHhcCCCc
Confidence 322 2113344688999999988 53
No 247
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=75.50 E-value=14 Score=32.00 Aligned_cols=94 Identities=10% Similarity=0.007 Sum_probs=64.8
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCC--CeEEEeec--CCCHHHHHhhcCCC-ceEEEEecCCCCcccc
Q 024619 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVN--TCDLDEVASAIGPW-TKLVWVESPTNPRQQI 155 (265)
Q Consensus 81 ~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~--g~~~~~~~--~~d~~~l~~~~~~~-~~~i~~~~~~np~G~~ 155 (265)
+++..+..+.++-+...+++|..+.....+..+.+.. .+++..=+ +.+++++++.+..+ ..+|.+. + +..|.+
T Consensus 271 ~ai~~~~~L~~~~~i~~iEePl~~~d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~ik-~-~~~GGi 348 (431)
T 2fym_A 271 EFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIK-F-NQIGSL 348 (431)
T ss_dssp HHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC-G-GGTCSH
T ss_pred HHHHHHHHHHHhCCceEEECCCCcccHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEEC-c-cccCCH
Confidence 5555666665534578899998876666665555544 45554333 34788888888654 4444443 4 557899
Q ss_pred ccHHHHHHHHHHcCCEEEEeC
Q 024619 156 CDIRKIAEMAHAHGALLLVDN 176 (265)
Q Consensus 156 ~~l~~i~~~a~~~~~~li~D~ 176 (265)
.+..+++++|+++|+.+++-.
T Consensus 349 te~~~i~~~A~~~g~~~~~~h 369 (431)
T 2fym_A 349 TETLAAIKMAKDAGYTAVISH 369 (431)
T ss_dssp HHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHCCCeEEEeC
Confidence 999999999999999887643
No 248
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=74.97 E-value=8 Score=33.83 Aligned_cols=92 Identities=13% Similarity=0.069 Sum_probs=63.4
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCC--CeEEEeecC--CCHHHHHhhcCCCc-eEEEEecCCCCcccc
Q 024619 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNT--CDLDEVASAIGPWT-KLVWVESPTNPRQQI 155 (265)
Q Consensus 81 ~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~--g~~~~~~~~--~d~~~l~~~~~~~~-~~i~~~~~~np~G~~ 155 (265)
+++..+..++++-+.+.+++|..+.....|..+.+.. .+.+.-=+. .+++++++.+..+. .+|.+ -+ |..|.+
T Consensus 293 eai~~~~~lle~y~i~~IEdPl~~dD~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~i-Kv-~~iGGi 370 (449)
T 3uj2_A 293 ELVAHWKSLCERYPIVSIEDGLDEEDWEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILI-KL-NQIGTV 370 (449)
T ss_dssp HHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEE-CH-HHHCSH
T ss_pred HHHHHHHHHHHhcCceEEECCCCcchHHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEEEE-Cc-cccCCH
Confidence 5555666666666788899998776666666655554 344433232 26888988886554 44443 34 557899
Q ss_pred ccHHHHHHHHHHcCCEEEE
Q 024619 156 CDIRKIAEMAHAHGALLLV 174 (265)
Q Consensus 156 ~~l~~i~~~a~~~~~~li~ 174 (265)
.+..+++++|+++|+.+++
T Consensus 371 Tea~kia~lA~~~Gi~~~v 389 (449)
T 3uj2_A 371 SETLEAIKMAHKAGYTAVV 389 (449)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCeEEE
Confidence 9999999999999999665
No 249
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=74.94 E-value=15 Score=28.38 Aligned_cols=91 Identities=5% Similarity=-0.022 Sum_probs=55.3
Q ss_pred ceEEecchHHHH--HHHHHhcCCC-CEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g-~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~ 148 (265)
..+++++|+..+ .++..+.+.| ..|++..-.-... ......+++++..|+.|.+++++++. +..+|+.+..
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~-----~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~D~vv~~a~ 97 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI-----HKPYPTNSQIIMGDVLNHAALKQAMQ-GQDIVYANLT 97 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS-----CSSCCTTEEEEECCTTCHHHHHHHHT-TCSEEEEECC
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh-----cccccCCcEEEEecCCCHHHHHHHhc-CCCEEEEcCC
Confidence 356666665554 5777888888 5665432211111 11223478888889999999998886 3555554332
Q ss_pred CCCccccccHHHHHHHHHHcCC
Q 024619 149 TNPRQQICDIRKIAEMAHAHGA 170 (265)
Q Consensus 149 ~np~G~~~~l~~i~~~a~~~~~ 170 (265)
. .......+.+++.+++.+.
T Consensus 98 ~--~~~~~~~~~~~~~~~~~~~ 117 (236)
T 3qvo_A 98 G--EDLDIQANSVIAAMKACDV 117 (236)
T ss_dssp S--TTHHHHHHHHHHHHHHTTC
T ss_pred C--CchhHHHHHHHHHHHHcCC
Confidence 1 1222345788999998875
No 250
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=73.90 E-value=6.7 Score=31.25 Aligned_cols=90 Identities=20% Similarity=0.280 Sum_probs=49.9
Q ss_pred EEecchHHHH--HHHHHhcCC--CCEEEE-cCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecC
Q 024619 74 LCFTSGMAAL--AAVTHLLGT--GEEIVA-GDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (265)
Q Consensus 74 i~~~~g~~al--~~~~~~~~~--g~~viv-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~ 148 (265)
+++++|+..+ .++..+.+. |..|.+ .... .... .. ...+++++..|+.|.+.+.+++.. ...|+.+..
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~-~~~~----~~-~~~~~~~~~~D~~d~~~~~~~~~~-~d~vi~~a~ 74 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNP-AKAQ----AL-AAQGITVRQADYGDEAALTSALQG-VEKLLLISS 74 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCT-TTCH----HH-HHTTCEEEECCTTCHHHHHHHTTT-CSEEEECC-
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcCh-Hhhh----hh-hcCCCeEEEcCCCCHHHHHHHHhC-CCEEEEeCC
Confidence 4455554444 566777776 766654 3321 1111 11 123678888899999999888753 555554433
Q ss_pred CCCccccccHHHHHHHHHHcCC
Q 024619 149 TNPRQQICDIRKIAEMAHAHGA 170 (265)
Q Consensus 149 ~np~G~~~~l~~i~~~a~~~~~ 170 (265)
..+...+.-.+.+++.|++.++
T Consensus 75 ~~~~~~~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 75 SEVGQRAPQHRNVINAAKAAGV 96 (286)
T ss_dssp -------CHHHHHHHHHHHHTC
T ss_pred CCchHHHHHHHHHHHHHHHcCC
Confidence 2222223345788888888775
No 251
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=73.55 E-value=7.4 Score=31.15 Aligned_cols=90 Identities=11% Similarity=0.130 Sum_probs=52.7
Q ss_pred EEecchHHHH--HHHHHhcCC-CCEEEE-cCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCC
Q 024619 74 LCFTSGMAAL--AAVTHLLGT-GEEIVA-GDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (265)
Q Consensus 74 i~~~~g~~al--~~~~~~~~~-g~~viv-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~ 149 (265)
+++++++..+ .++..+.+. |..|.+ ....- .. ......+++++..|+.|.+.+.+++. +...|+.+...
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~-~~-----~~~~~~~v~~~~~D~~d~~~l~~~~~-~~d~vi~~a~~ 75 (289)
T 3e48_A 3 IMLTGATGHLGTHITNQAIANHIDHFHIGVRNVE-KV-----PDDWRGKVSVRQLDYFNQESMVEAFK-GMDTVVFIPSI 75 (289)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGG-GS-----CGGGBTTBEEEECCTTCHHHHHHHTT-TCSEEEECCCC
T ss_pred EEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHH-HH-----HHhhhCCCEEEEcCCCCHHHHHHHHh-CCCEEEEeCCC
Confidence 4555554333 455556554 665554 33211 11 11234578999999999999998886 45655544332
Q ss_pred -CCcc-ccccHHHHHHHHHHcCC
Q 024619 150 -NPRQ-QICDIRKIAEMAHAHGA 170 (265)
Q Consensus 150 -np~G-~~~~l~~i~~~a~~~~~ 170 (265)
++.. .+...+.+++.|++.++
T Consensus 76 ~~~~~~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 76 IHPSFKRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp CCSHHHHHHHHHHHHHHHHHTTC
T ss_pred CccchhhHHHHHHHHHHHHHcCC
Confidence 2211 12345789999999885
No 252
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=73.46 E-value=21 Score=27.02 Aligned_cols=89 Identities=13% Similarity=0.094 Sum_probs=55.5
Q ss_pred EEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCC-HHHHHhhcCCCceEEEEecCCC
Q 024619 74 LCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCD-LDEVASAIGPWTKLVWVESPTN 150 (265)
Q Consensus 74 i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d-~~~l~~~~~~~~~~i~~~~~~n 150 (265)
+++++|+..+ .++..+.+.|..|++..-.-. ......+++++..|+.| .+.+.+++. +..+|+-+....
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~-------~~~~~~~~~~~~~D~~d~~~~~~~~~~-~~d~vi~~ag~~ 74 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVE-------QVPQYNNVKAVHFDVDWTPEEMAKQLH-GMDAIINVSGSG 74 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSGG-------GSCCCTTEEEEECCTTSCHHHHHTTTT-TCSEEEECCCCT
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCcc-------chhhcCCceEEEecccCCHHHHHHHHc-CCCEEEECCcCC
Confidence 4555555444 577788888887765432211 11122678888999999 999998886 466666544332
Q ss_pred Ccccc----ccHHHHHHHHHHcCC
Q 024619 151 PRQQI----CDIRKIAEMAHAHGA 170 (265)
Q Consensus 151 p~G~~----~~l~~i~~~a~~~~~ 170 (265)
..... .-...+++.|++.++
T Consensus 75 ~~~~~~~n~~~~~~l~~a~~~~~~ 98 (219)
T 3dqp_A 75 GKSLLKVDLYGAVKLMQAAEKAEV 98 (219)
T ss_dssp TSSCCCCCCHHHHHHHHHHHHTTC
T ss_pred CCCcEeEeHHHHHHHHHHHHHhCC
Confidence 21111 225778899998875
No 253
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=72.22 E-value=5.4 Score=33.08 Aligned_cols=98 Identities=8% Similarity=0.043 Sum_probs=57.3
Q ss_pred eEEecchH--HHHHHHHHhcCCCCEEE-EcCCC--CCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC-CceEEEEe
Q 024619 73 ALCFTSGM--AALAAVTHLLGTGEEIV-AGDDL--YGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVE 146 (265)
Q Consensus 73 ~i~~~~g~--~al~~~~~~~~~g~~vi-v~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~-~~~~i~~~ 146 (265)
.+++++|+ -+-.++..+++.|..|. +.... .+.....+ ......+++++..|+.|.+.+.+++.. ++..|+-+
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~-~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~ 90 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIF-KALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST 90 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHH-HHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHH-HHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence 35555544 44456666766676555 44432 11111111 122346889999999999999988862 46665544
Q ss_pred cCCCCccccccHHHHHHHHHHcC-CEEEE
Q 024619 147 SPTNPRQQICDIRKIAEMAHAHG-ALLLV 174 (265)
Q Consensus 147 ~~~np~G~~~~l~~i~~~a~~~~-~~li~ 174 (265)
.... .+.....+++.|++.+ +..++
T Consensus 91 a~~~---n~~~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 91 VGGE---SILDQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp CCGG---GGGGHHHHHHHHHHHCCCSEEE
T ss_pred Cchh---hHHHHHHHHHHHHHcCCceEEe
Confidence 3321 2334578999999988 64443
No 254
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=71.97 E-value=24 Score=25.21 Aligned_cols=90 Identities=9% Similarity=-0.014 Sum_probs=52.6
Q ss_pred CceEEecchHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcC-CCCeEEEeecCCCHHHHHhhcCCCceEEEEecCC
Q 024619 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (265)
Q Consensus 71 ~~~i~~~~g~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~ 149 (265)
..++++..|.-+..++..+.+.|..|++.+..-... ..++ ..|..++..+..+.+.+.++--.+..+|+++.+.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~-----~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAF-----HRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTND 94 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGG-----GGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHH-----HHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCC
Confidence 457888888777666666666676666554432111 2334 5677766666667777765422456677766543
Q ss_pred CCccccccHHHHHHHHHH-cCC
Q 024619 150 NPRQQICDIRKIAEMAHA-HGA 170 (265)
Q Consensus 150 np~G~~~~l~~i~~~a~~-~~~ 170 (265)
. .....+..++++ .+.
T Consensus 95 ~-----~~~~~~~~~~~~~~~~ 111 (155)
T 2g1u_A 95 D-----STNFFISMNARYMFNV 111 (155)
T ss_dssp H-----HHHHHHHHHHHHTSCC
T ss_pred c-----HHHHHHHHHHHHHCCC
Confidence 1 123566677776 443
No 255
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=69.37 E-value=4.4 Score=35.31 Aligned_cols=94 Identities=13% Similarity=0.032 Sum_probs=67.3
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCC--eEEEeec--CCCHHHHHhhcCCC-ceEEEEecCCCCccc
Q 024619 80 MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVN--TCDLDEVASAIGPW-TKLVWVESPTNPRQQ 154 (265)
Q Consensus 80 ~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g--~~~~~~~--~~d~~~l~~~~~~~-~~~i~~~~~~np~G~ 154 (265)
.+++.....++++-..+.+++|....-...|..+.+..+ ++++-=+ +.+++.+++.+..+ ..+|.+ -+ |-.|.
T Consensus 284 ~Elid~y~~lle~ypIv~IEDPl~~dD~eg~a~Lt~~lg~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~IlI-Kv-nQIGg 361 (452)
T 3otr_A 284 EKLKEVYEGWLKKYPIISVEDPFDQDDFASFSAFTKDVGEKTQVIGDDILVTNILRIEKALKDKACNCLLL-KV-NQIGS 361 (452)
T ss_dssp HHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEE-CH-HHHCC
T ss_pred HHHHHHHHHHHhhhCceEEecCCChhhHHHHHHHHHhhCCCeEEEeCccccCCHHHHHHHHhcCCCCEEEe-ec-ccccc
Confidence 355667777777666788999987777777766666656 6664434 34789998888754 344443 23 55789
Q ss_pred cccHHHHHHHHHHcCCEEEEe
Q 024619 155 ICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 155 ~~~l~~i~~~a~~~~~~li~D 175 (265)
+.+..+++++|+++|..+++=
T Consensus 362 ITEalka~~lA~~~G~~vmvs 382 (452)
T 3otr_A 362 VTEAIEACLLAQKSGWGVQVS 382 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEe
Confidence 999999999999999987663
No 256
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=67.60 E-value=10 Score=33.23 Aligned_cols=93 Identities=12% Similarity=0.048 Sum_probs=59.2
Q ss_pred ceEEecchHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCC
Q 024619 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (265)
Q Consensus 72 ~~i~~~~g~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np 151 (265)
.++++.+|..|...+..+++.|-.|.+.+|...... ..+.+..+++++.-.. +.+++. +..+|+. .+.++
T Consensus 14 ~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~---~~l~~~~~i~~~~~~~-~~~~l~-----~~~lVi~-at~~~ 83 (457)
T 1pjq_A 14 DCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQF---TVWANEGMLTLVEGPF-DETLLD-----SCWLAIA-ATDDD 83 (457)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHH---HHHHTTTSCEEEESSC-CGGGGT-----TCSEEEE-CCSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHH---HHHHhcCCEEEEECCC-CccccC-----CccEEEE-cCCCH
Confidence 588889998998888888888988887777654433 2444445566654332 223332 3445544 44333
Q ss_pred ccccccHHHHHHHHHHcCCEE-EEeCCc
Q 024619 152 RQQICDIRKIAEMAHAHGALL-LVDNSI 178 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~~~~l-i~D~~~ 178 (265)
..-..+.+.|++.|+++ ++|+.-
T Consensus 84 ----~~n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 84 ----TVNQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp ----HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred ----HHHHHHHHHHHHcCCEEEECCCcc
Confidence 22367899999999986 577653
No 257
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=67.11 E-value=39 Score=25.62 Aligned_cols=128 Identities=12% Similarity=0.021 Sum_probs=67.3
Q ss_pred hhHHHHHHHHHhHhCCCceEEecch-HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHH
Q 024619 55 PTRDALESLLAKLDKADRALCFTSG-MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVA 133 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~g-~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~ 133 (265)
+...++.+.+.+-++.+ .-+...+ .+++..+..+ +.|..|+++...-..+ ++ +..+++++.++....|-++
T Consensus 14 ~~l~~~~~~i~~e~~~~-i~i~~~~l~~~v~~a~~~-~~~~dVIISRGgta~~---lr---~~~~iPVV~I~~s~~Dil~ 85 (196)
T 2q5c_A 14 ENLLNLFPKLALEKNFI-PITKTASLTRASKIAFGL-QDEVDAIISRGATSDY---IK---KSVSIPSISIKVTRFDTMR 85 (196)
T ss_dssp HHHHHHHHHHHHHHTCE-EEEEECCHHHHHHHHHHH-TTTCSEEEEEHHHHHH---HH---TTCSSCEEEECCCHHHHHH
T ss_pred HHHHHHHHHHHhhhCCc-eEEEECCHHHHHHHHHHh-cCCCeEEEECChHHHH---HH---HhCCCCEEEEcCCHhHHHH
Confidence 43333444555555553 3344444 4788777777 7887799987643222 22 3457899999887544443
Q ss_pred hh---cCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcC----CCCCcCCCCCCccEEEec
Q 024619 134 SA---IGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM----SPVLSRPLELGADIVMHS 197 (265)
Q Consensus 134 ~~---~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~----~~~~~~~~~~~~di~~~s 197 (265)
.. .....+.-++..++-+ ..++.+.++. |.-+-.-.... ...+......|.++++++
T Consensus 86 al~~a~~~~~kIavvg~~~~~----~~~~~~~~ll---~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~ 149 (196)
T 2q5c_A 86 AVYNAKRFGNELALIAYKHSI----VDKHEIEAML---GVKIKEFLFSSEDEITTLISKVKTENIKIVVSG 149 (196)
T ss_dssp HHHHHGGGCSEEEEEEESSCS----SCHHHHHHHH---TCEEEEEEECSGGGHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHhhCCcEEEEeCcchh----hHHHHHHHHh---CCceEEEEeCCHHHHHHHHHHHHHCCCeEEECC
Confidence 33 2233455555555332 2345554443 33332221111 122223445678888887
No 258
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=66.92 E-value=26 Score=29.16 Aligned_cols=93 Identities=11% Similarity=0.168 Sum_probs=52.3
Q ss_pred eEEecchHH--HHHHHHHhcCCCCEEEE-cCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHHHhhcCCCceEEEEecC
Q 024619 73 ALCFTSGMA--ALAAVTHLLGTGEEIVA-GDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASAIGPWTKLVWVESP 148 (265)
Q Consensus 73 ~i~~~~g~~--al~~~~~~~~~g~~viv-~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l~~~~~~~~~~i~~~~~ 148 (265)
.+++++++. +-.++..+.+.|..|.+ ....-..... ......+++++..| +.|.+.+.+++.. ...|+.+..
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~l~~~~~v~~v~~D~l~d~~~l~~~~~~-~d~Vi~~a~ 82 (352)
T 1xgk_A 7 TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE---ELQAIPNVTLFQGPLLNNVPLMDTLFEG-AHLAFINTT 82 (352)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH---HHHTSTTEEEEESCCTTCHHHHHHHHTT-CSEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHH---HHhhcCCcEEEECCccCCHHHHHHHHhc-CCEEEEcCC
Confidence 355555543 33566667667776654 3322111111 22223478888889 8899999888753 566654433
Q ss_pred CCCccccccHHHHHHHHHHcC
Q 024619 149 TNPRQQICDIRKIAEMAHAHG 169 (265)
Q Consensus 149 ~np~G~~~~l~~i~~~a~~~~ 169 (265)
.........-+.+++.|++.+
T Consensus 83 ~~~~~~~~~~~~l~~aa~~~g 103 (352)
T 1xgk_A 83 SQAGDEIAIGKDLADAAKRAG 103 (352)
T ss_dssp STTSCHHHHHHHHHHHHHHHS
T ss_pred CCCcHHHHHHHHHHHHHHHcC
Confidence 221111122378889998887
No 259
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=66.81 E-value=9.6 Score=27.29 Aligned_cols=106 Identities=11% Similarity=0.102 Sum_probs=52.9
Q ss_pred HHHHhHh-CCCceEEecch----HHHHHHHHHhcCCCCEEEEcCCC-----------CCChHHHHHhhcCCCCeEEEeec
Q 024619 62 SLLAKLD-KADRALCFTSG----MAALAAVTHLLGTGEEIVAGDDL-----------YGGTDRLLSRVTPKTGVVVKRVN 125 (265)
Q Consensus 62 ~~l~~~~-g~~~~i~~~~g----~~al~~~~~~~~~g~~viv~~~~-----------~~~~~~~~~~~~~~~g~~~~~~~ 125 (265)
+.+.+++ ....+.++..+ ..+...+..+.+.|-+|.--+|. |++.. ++.+...+-++.++
T Consensus 4 ~~l~~ll~~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i~G~~~~~sl~----el~~~vDlavi~vp 79 (140)
T 1iuk_A 4 QELRAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLL----DLKEPVDILDVFRP 79 (140)
T ss_dssp HHHHHHHHHCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGG----GCCSCCSEEEECSC
T ss_pred HHHHHHHcCCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCcCCCEEecCCHH----HCCCCCCEEEEEeC
Confidence 3455666 56666666653 23333344454555555544554 33331 22222233333333
Q ss_pred CCC-HHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 126 TCD-LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 126 ~~d-~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
... .+.++++....++.+++.. |.. -+++.++|+++|+.++-+.+.
T Consensus 80 ~~~~~~v~~~~~~~gi~~i~~~~-----g~~--~~~~~~~a~~~Gir~vgpnc~ 126 (140)
T 1iuk_A 80 PSALMDHLPEVLALRPGLVWLQS-----GIR--HPEFEKALKEAGIPVVADRCL 126 (140)
T ss_dssp HHHHTTTHHHHHHHCCSCEEECT-----TCC--CHHHHHHHHHTTCCEEESCCH
T ss_pred HHHHHHHHHHHHHcCCCEEEEcC-----CcC--HHHHHHHHHHcCCEEEcCCcc
Confidence 111 1222233333455565432 222 389999999999999987764
No 260
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=66.02 E-value=15 Score=32.04 Aligned_cols=93 Identities=15% Similarity=0.109 Sum_probs=63.9
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCC--CeEEEeec--CCCHHHHHhhcCCC-ceEEEEecCCCCcccc
Q 024619 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVN--TCDLDEVASAIGPW-TKLVWVESPTNPRQQI 155 (265)
Q Consensus 81 ~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~--g~~~~~~~--~~d~~~l~~~~~~~-~~~i~~~~~~np~G~~ 155 (265)
+++..+..+.++-+...+++|..+.....+..+.+.. .+++..=+ ..+++++++.+..+ ..+|.+. + +..|.+
T Consensus 283 eai~~~~~l~~~~~i~~iEePl~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik-~-~~~GGi 360 (444)
T 1w6t_A 283 EQIDYLEELVNKYPIITIEDGMDENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILIK-V-NQIGTL 360 (444)
T ss_dssp HHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC-H-HHHCSH
T ss_pred HHHHHHHHHHHhCCcEEEECCCChhhHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEEc-c-cccCCH
Confidence 5566666665545677899998776666665555544 44544333 34788888887644 4444433 3 457889
Q ss_pred ccHHHHHHHHHHcCCEEEEe
Q 024619 156 CDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 156 ~~l~~i~~~a~~~~~~li~D 175 (265)
.+..+++++|+++|+.++.-
T Consensus 361 tea~~ia~lA~~~g~~v~~~ 380 (444)
T 1w6t_A 361 TETFEAIEMAKEAGYTAVVS 380 (444)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEec
Confidence 99999999999999998874
No 261
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=65.98 E-value=16 Score=31.58 Aligned_cols=92 Identities=11% Similarity=0.094 Sum_probs=62.4
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC--CCHHHHHhhcCCC-ceEEEEecCCCCcccccc
Q 024619 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQICD 157 (265)
Q Consensus 81 ~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~d~~~l~~~~~~~-~~~i~~~~~~np~G~~~~ 157 (265)
+++..+...+++-+...+++|..+.....+..+.+...+++..=.. .+..++++.+..+ ..+|.+. + +..|.+.+
T Consensus 271 ~ai~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik-~-~~~GGite 348 (427)
T 2pa6_A 271 ELLDYYKALVDEYPIVSIEDPFHEEDFEGFAMITKELDIQIVGDDLFVTNVERLRKGIEMKAANALLLK-V-NQIGTLSE 348 (427)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHSSSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC-H-HHHCSHHH
T ss_pred HHHHHHHHHHhhCCCcEEEcCCChhhHHHHHHHHhhCCCeEEeCccccCCHHHHHHHHHhCCCCEEEEc-c-cccCCHHH
Confidence 5555544455555677899998776666665655555555543332 3588888887644 4444432 3 44788889
Q ss_pred HHHHHHHHHHcCCEEEE
Q 024619 158 IRKIAEMAHAHGALLLV 174 (265)
Q Consensus 158 l~~i~~~a~~~~~~li~ 174 (265)
..+++++|+++|+.++.
T Consensus 349 a~~ia~lA~~~g~~~~~ 365 (427)
T 2pa6_A 349 AVDAAQLAFRNGYGVVV 365 (427)
T ss_dssp HHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHcCCeEEE
Confidence 99999999999999876
No 262
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=65.96 E-value=16 Score=29.87 Aligned_cols=98 Identities=11% Similarity=0.172 Sum_probs=56.4
Q ss_pred eEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhc--CCCCeEEEeecCCCHHHHHhhcCC-CceEEEEec
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT--PKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVES 147 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~ 147 (265)
.+++++|+..+ .++..+.+.|..|++..-.-........... ...++.++..|+.|.+.+.+++.. ++..|+-+.
T Consensus 7 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 86 (341)
T 3enk_A 7 TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHFA 86 (341)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEECc
Confidence 56777766555 4677788889888764432222111111111 123567778888899999888763 566665544
Q ss_pred CCCCccccc------------cHHHHHHHHHHcCC
Q 024619 148 PTNPRQQIC------------DIRKIAEMAHAHGA 170 (265)
Q Consensus 148 ~~np~G~~~------------~l~~i~~~a~~~~~ 170 (265)
.....+... -...+++.+++.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 121 (341)
T 3enk_A 87 ALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAV 121 (341)
T ss_dssp CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cccccCccccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 333222111 13567888888874
No 263
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=65.84 E-value=38 Score=27.94 Aligned_cols=97 Identities=10% Similarity=0.080 Sum_probs=55.8
Q ss_pred eEEecchHHHH--HHHHHhcC--CCCEEEEcCCCCC------------ChHHHHHhhcCCCCeEEEeecCCCHHHHHhhc
Q 024619 73 ALCFTSGMAAL--AAVTHLLG--TGEEIVAGDDLYG------------GTDRLLSRVTPKTGVVVKRVNTCDLDEVASAI 136 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~--~g~~viv~~~~~~------------~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~ 136 (265)
.+++++|+..+ .++..+.+ .|..|++.+-.-. ... ......+++++..|+.|.+.+.++.
T Consensus 12 ~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~Dl~d~~~~~~~~ 87 (362)
T 3sxp_A 12 TILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHF----KNLIGFKGEVIAADINNPLDLRRLE 87 (362)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCG----GGGTTCCSEEEECCTTCHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhh----hhccccCceEEECCCCCHHHHHHhh
Confidence 56666666555 46677777 7887775432111 000 1122345688888999999998873
Q ss_pred CCCceEEEEecCCCCcccc----------ccHHHHHHHHHHcCCEEE
Q 024619 137 GPWTKLVWVESPTNPRQQI----------CDIRKIAEMAHAHGALLL 173 (265)
Q Consensus 137 ~~~~~~i~~~~~~np~G~~----------~~l~~i~~~a~~~~~~li 173 (265)
..++.+|+-+........- .-...+++.|++.++.+|
T Consensus 88 ~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V 134 (362)
T 3sxp_A 88 KLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVI 134 (362)
T ss_dssp TSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEE
T ss_pred ccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 4556666544332111000 113578889998887543
No 264
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=65.32 E-value=8.8 Score=33.34 Aligned_cols=90 Identities=9% Similarity=-0.019 Sum_probs=62.7
Q ss_pred HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCC--CeEEEeecC--CCHHHHHhhcCCCceEEEEecCCCCccccccHHH
Q 024619 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNT--CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (265)
Q Consensus 85 ~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~--g~~~~~~~~--~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~ 160 (265)
.+..++++-+.+.+++|..+.....+..+.+.. .+++.-=+. .+++.+++.+..+..=++..-+ |-.|.+.+..+
T Consensus 280 ~~~~~l~~y~i~~iEdPl~~~D~~g~~~l~~~~g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i~ik~-~~~GGitea~~ 358 (432)
T 2ptz_A 280 TYCKWAHDYPIVSIEDPYDQDDFAGFAGITEALKGKTQIVGDDLTVTNTERIKMAIEKKACNSLLLKI-NQIGTISEAIA 358 (432)
T ss_dssp HHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHTTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECH-HHHCCHHHHHH
T ss_pred HHHHHHHhCCceEEECCCCcchHHHHHHHHHhcCCCCeEEecCcccCCHHHHHHHHHcCCCCEEEecc-cccCCHHHHHH
Confidence 334555556788899998877777776666655 556633333 5788898888755433333333 45789999999
Q ss_pred HHHHHHHcCCEEEEe
Q 024619 161 IAEMAHAHGALLLVD 175 (265)
Q Consensus 161 i~~~a~~~~~~li~D 175 (265)
++++|+++|+.+++=
T Consensus 359 i~~lA~~~g~~v~~~ 373 (432)
T 2ptz_A 359 SSKLCMENGWSVMVS 373 (432)
T ss_dssp HHHHHHHTTCEEEEE
T ss_pred HHHHHHHcCCeEEec
Confidence 999999999998653
No 265
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=64.71 E-value=16 Score=29.60 Aligned_cols=93 Identities=16% Similarity=0.112 Sum_probs=54.8
Q ss_pred eEEecchH--HHHHHHHHhcCCCCEEE-EcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCC
Q 024619 73 ALCFTSGM--AALAAVTHLLGTGEEIV-AGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (265)
Q Consensus 73 ~i~~~~g~--~al~~~~~~~~~g~~vi-v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~ 149 (265)
.+++++++ .+-.++..+++.|..|. +....-.. ...+.. ....|++++..|+.|.+.+.+++.. ...|+.+...
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-~~~~~~-l~~~~v~~v~~Dl~d~~~l~~a~~~-~d~vi~~a~~ 89 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSK-TTLLDE-FQSLGAIIVKGELDEHEKLVELMKK-VDVVISALAF 89 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSC-HHHHHH-HHHTTCEEEECCTTCHHHHHHHHTT-CSEEEECCCG
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCch-hhHHHH-hhcCCCEEEEecCCCHHHHHHHHcC-CCEEEECCch
Confidence 34555544 44456677777776654 34332111 111111 1235789999999999999998864 5555543321
Q ss_pred CCccccccHHHHHHHHHHcC-CE
Q 024619 150 NPRQQICDIRKIAEMAHAHG-AL 171 (265)
Q Consensus 150 np~G~~~~l~~i~~~a~~~~-~~ 171 (265)
. .+.....+++.|++.+ +-
T Consensus 90 ~---~~~~~~~l~~aa~~~g~v~ 109 (318)
T 2r6j_A 90 P---QILDQFKILEAIKVAGNIK 109 (318)
T ss_dssp G---GSTTHHHHHHHHHHHCCCC
T ss_pred h---hhHHHHHHHHHHHhcCCCC
Confidence 1 1344678999999987 54
No 266
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=64.56 E-value=31 Score=24.61 Aligned_cols=105 Identities=17% Similarity=0.183 Sum_probs=53.6
Q ss_pred HHHhHhC-CCceEEecch----HHHHHHHHHhcCCCCEEEEcCCC---------CCChHHHHHhhcCCCCeEEEeecCCC
Q 024619 63 LLAKLDK-ADRALCFTSG----MAALAAVTHLLGTGEEIVAGDDL---------YGGTDRLLSRVTPKTGVVVKRVNTCD 128 (265)
Q Consensus 63 ~l~~~~g-~~~~i~~~~g----~~al~~~~~~~~~g~~viv~~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~d 128 (265)
.+..++. ...+.++..+ ..+...+..+.+.|-.|.--+|. |++.. ++.....+-++.++...
T Consensus 14 ~l~~ll~~p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~----~l~~~vDlvvi~vp~~~ 89 (144)
T 2d59_A 14 DIREILTRYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVL----DIPDKIEVVDLFVKPKL 89 (144)
T ss_dssp HHHHHHHHCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGG----GCSSCCSEEEECSCHHH
T ss_pred HHHHHHcCCCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeECCeeccCCHH----HcCCCCCEEEEEeCHHH
Confidence 3455564 5566666653 22333334444455555544553 33331 22222233333333222
Q ss_pred -HHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 129 -LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 129 -~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
.+.+++++...++.+++. + |. .-+++.++|+++|+.++-+.+.
T Consensus 90 ~~~vv~~~~~~gi~~i~~~-~----g~--~~~~l~~~a~~~Gi~vvGpnc~ 133 (144)
T 2d59_A 90 TMEYVEQAIKKGAKVVWFQ-Y----NT--YNREASKKADEAGLIIVANRCM 133 (144)
T ss_dssp HHHHHHHHHHHTCSEEEEC-T----TC--CCHHHHHHHHHTTCEEEESCCH
T ss_pred HHHHHHHHHHcCCCEEEEC-C----Cc--hHHHHHHHHHHcCCEEEcCCch
Confidence 233444444456666643 2 22 2589999999999998877653
No 267
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=64.39 E-value=27 Score=28.16 Aligned_cols=89 Identities=10% Similarity=0.071 Sum_probs=52.9
Q ss_pred eEEecchH--HHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCC
Q 024619 73 ALCFTSGM--AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (265)
Q Consensus 73 ~i~~~~g~--~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~n 150 (265)
.+++++|+ -+-.++..+.+.|..|.+..-. .... . . .+++++..++. .+.+.+++. ++..|+-+....
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~----~-~--~~~~~~~~Dl~-~~~~~~~~~-~~d~Vih~a~~~ 73 (311)
T 3m2p_A 4 KIAVTGGTGFLGQYVVESIKNDGNTPIILTRS-IGNK----A-I--NDYEYRVSDYT-LEDLINQLN-DVDAVVHLAATR 73 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-CC------------CCEEEECCCC-HHHHHHHTT-TCSEEEECCCCC
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC-CCcc----c-C--CceEEEEcccc-HHHHHHhhc-CCCEEEEccccC
Confidence 35555554 3445677777788877754333 3332 1 1 27888889988 899988886 566665443322
Q ss_pred Ccc----cc----ccHHHHHHHHHHcCCE
Q 024619 151 PRQ----QI----CDIRKIAEMAHAHGAL 171 (265)
Q Consensus 151 p~G----~~----~~l~~i~~~a~~~~~~ 171 (265)
... .. .-...+++.|++.++.
T Consensus 74 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~ 102 (311)
T 3m2p_A 74 GSQGKISEFHDNEILTQNLYDACYENNIS 102 (311)
T ss_dssp CSSSCGGGTHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 111 11 1247889999998763
No 268
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=63.79 E-value=11 Score=26.41 Aligned_cols=89 Identities=15% Similarity=0.034 Sum_probs=54.1
Q ss_pred CceEEecchHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCC
Q 024619 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (265)
Q Consensus 71 ~~~i~~~~g~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~n 150 (265)
..++++..|.-+..+...+.+.|..|++.+..- ..... ++..+..++..+..+.+.++++--.+..+|+++.+ +
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~----~~~~~-~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~-~ 80 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK----EKIEL-LEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS-D 80 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH----HHHHH-HHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS-C
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH----HHHHH-HHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC-C
Confidence 357788888766666666766676666544321 11112 23357788888888988888764456777776655 2
Q ss_pred CccccccHHHHHHHHHHcC
Q 024619 151 PRQQICDIRKIAEMAHAHG 169 (265)
Q Consensus 151 p~G~~~~l~~i~~~a~~~~ 169 (265)
. ..-..++..+++.+
T Consensus 81 ~----~~n~~~~~~a~~~~ 95 (141)
T 3llv_A 81 D----EFNLKILKALRSVS 95 (141)
T ss_dssp H----HHHHHHHHHHHHHC
T ss_pred H----HHHHHHHHHHHHhC
Confidence 1 11234566677654
No 269
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=62.39 E-value=51 Score=26.54 Aligned_cols=76 Identities=14% Similarity=0.167 Sum_probs=45.3
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCC--CCeEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++|+|+..+ .+...+.+.|..|++.+-.-...........+. ..+..+.+|+.|.+++++.+. .+..
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 121 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALD 121 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 478888887776 466778888988876544333333222222222 245666778888887776653 2455
Q ss_pred EEEEec
Q 024619 142 LVWVES 147 (265)
Q Consensus 142 ~i~~~~ 147 (265)
+++-+.
T Consensus 122 ~lvnnA 127 (293)
T 3rih_A 122 VVCANA 127 (293)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 270
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=62.04 E-value=26 Score=24.76 Aligned_cols=49 Identities=10% Similarity=0.142 Sum_probs=33.3
Q ss_pred EEeecCCCHHHHHhhcC-CCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEe
Q 024619 121 VKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 121 ~~~~~~~d~~~l~~~~~-~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D 175 (265)
+.-++.+..+.+..++. .++.+|+++.-.. +-+++.++|+++|++++.=
T Consensus 55 l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~------~~~~i~~~A~~~~ipvl~t 104 (139)
T 2ioj_A 55 ALVTGGDRSDLLLTALEMPNVRCLILTGNLE------PVQLVLTKAEERGVPVILT 104 (139)
T ss_dssp EEEEETTCHHHHHHHTTCTTEEEEEEETTCC------CCHHHHHHHHHHTCCEEEC
T ss_pred EEEEcCCHHHHHHHHHhCCCCcEEEEcCCCC------CCHHHHHHHHHCCCeEEEE
Confidence 33333444555566676 6788888875544 4478889999999987753
No 271
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=61.93 E-value=18 Score=27.91 Aligned_cols=38 Identities=16% Similarity=0.180 Sum_probs=30.1
Q ss_pred CCCceEEEEecC-CCCccccccHHHHHHHHHHcCCEEEE
Q 024619 137 GPWTKLVWVESP-TNPRQQICDIRKIAEMAHAHGALLLV 174 (265)
Q Consensus 137 ~~~~~~i~~~~~-~np~G~~~~l~~i~~~a~~~~~~li~ 174 (265)
.-.+.+++.+-. -|..|....+.++.++|++||+.++.
T Consensus 156 Gl~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 156 GLQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp TSCSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred CCCceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 335666666652 47789999999999999999998874
No 272
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=61.73 E-value=30 Score=26.77 Aligned_cols=76 Identities=11% Similarity=0.111 Sum_probs=44.1
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC------CceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP------WTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~------~~~~i 143 (265)
..+++++|+..+ .++..+.+.|..|++..-.-..............++.+...|+.|.+.+.+.+.. +..++
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 86 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTL 86 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 467778777666 4667778888887764322111111111221124577778888888887776642 45665
Q ss_pred EEec
Q 024619 144 WVES 147 (265)
Q Consensus 144 ~~~~ 147 (265)
+-+.
T Consensus 87 i~~A 90 (251)
T 1zk4_A 87 VNNA 90 (251)
T ss_dssp EECC
T ss_pred EECC
Confidence 5544
No 273
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=61.69 E-value=7.2 Score=33.76 Aligned_cols=94 Identities=15% Similarity=0.090 Sum_probs=65.4
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCC--eEEEeecC-C-CHHHHHhhcCCC-ceEEEEecCCCCccc
Q 024619 80 MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT-C-DLDEVASAIGPW-TKLVWVESPTNPRQQ 154 (265)
Q Consensus 80 ~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g--~~~~~~~~-~-d~~~l~~~~~~~-~~~i~~~~~~np~G~ 154 (265)
.+++..+..++++-+.+.+++|....-...|..+.+..| +++.-=+. . +++.+++.+..+ ..+|.+ -+ |..|.
T Consensus 264 ~eai~~~~~ll~~y~i~~IEdPl~~dD~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~i-Kv-~qiGG 341 (417)
T 3qn3_A 264 EALIERYVELCAKYPICSIEDGLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLI-KP-NQIGT 341 (417)
T ss_dssp HHHHHHHHHHHHHSCEEEEESSSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEE-CH-HHHCS
T ss_pred HHHHHHHHHHHhhcceeEEecCCCcccHHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhCCCCEEEe-cC-CCCCC
Confidence 366666777666667888999987766666666655553 45443332 2 488888888654 444433 33 55799
Q ss_pred cccHHHHHHHHHHcCCEEEEe
Q 024619 155 ICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 155 ~~~l~~i~~~a~~~~~~li~D 175 (265)
+.+..+++++|+++|..+++=
T Consensus 342 iTea~kia~lA~~~G~~v~vs 362 (417)
T 3qn3_A 342 ITQTMRTVRLAQRNNYKCVMS 362 (417)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEe
Confidence 999999999999999998764
No 274
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=61.65 E-value=32 Score=28.02 Aligned_cols=94 Identities=14% Similarity=0.137 Sum_probs=53.0
Q ss_pred eEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCC-CCeEEEeecCCCHHHHHhhcCC-CceEEEEecC
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK-TGVVVKRVNTCDLDEVASAIGP-WTKLVWVESP 148 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~~ 148 (265)
.+++++|+..+ .++..+.+.|..|++..-.-.... ..... .+++++..|+.|.+.+.+++.. ++.+|+-+..
T Consensus 23 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~ 98 (333)
T 2q1w_A 23 KVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRR----EHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAA 98 (333)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG----GGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccch----hhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECce
Confidence 45666655444 466677777877765332111111 11121 4678888888899888887753 3556554433
Q ss_pred CCCccc---------cccHHHHHHHHHHcCC
Q 024619 149 TNPRQQ---------ICDIRKIAEMAHAHGA 170 (265)
Q Consensus 149 ~np~G~---------~~~l~~i~~~a~~~~~ 170 (265)
....+. +.-...+++.|++.++
T Consensus 99 ~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~ 129 (333)
T 2q1w_A 99 SYKDPDDWYNDTLTNCVGGSNVVQAAKKNNV 129 (333)
T ss_dssp CCSCTTCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred ecCCCccCChHHHHHHHHHHHHHHHHHHhCC
Confidence 222111 1123578888888775
No 275
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=61.27 E-value=30 Score=24.58 Aligned_cols=100 Identities=15% Similarity=0.156 Sum_probs=50.2
Q ss_pred hCCCceEEecc----hHHHHHHHHHhcCCCCEEEEcCCC---------CCChHHHHHhhcCCCCeEEEeecCCC-HHHHH
Q 024619 68 DKADRALCFTS----GMAALAAVTHLLGTGEEIVAGDDL---------YGGTDRLLSRVTPKTGVVVKRVNTCD-LDEVA 133 (265)
Q Consensus 68 ~g~~~~i~~~~----g~~al~~~~~~~~~g~~viv~~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~d-~~~l~ 133 (265)
+....+.++.- |..+...+..+.+.|-+|..-+|. |++.. ++.+...+-++.++... .+.++
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~----el~~~vDlvii~vp~~~v~~v~~ 87 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVR----ELPKDVDVIVFVVPPKVGLQVAK 87 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGG----GSCTTCCEEEECSCHHHHHHHHH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeECCeeecCCHH----HhCCCCCEEEEEeCHHHHHHHHH
Confidence 44445666665 443333444455556556655553 33332 33332333333344222 22233
Q ss_pred hhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 134 SAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 134 ~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
+.+...++.+++.. |.. -+++.+.|+++|+.++-+.+.
T Consensus 88 ~~~~~g~~~i~~~~-----~~~--~~~l~~~a~~~Gi~~igpnc~ 125 (138)
T 1y81_A 88 EAVEAGFKKLWFQP-----GAE--SEEIRRFLEKAGVEYSFGRCI 125 (138)
T ss_dssp HHHHTTCCEEEECT-----TSC--CHHHHHHHHHHTCEEECSCCH
T ss_pred HHHHcCCCEEEEcC-----ccH--HHHHHHHHHHCCCEEEcCCcc
Confidence 33334566666533 111 489999999999998766653
No 276
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=61.09 E-value=13 Score=28.79 Aligned_cols=113 Identities=14% Similarity=0.093 Sum_probs=67.0
Q ss_pred CCCCCh-hHHHHHHHHHhHhCCC---ceEEecchHHHHHHHHHh--cCCCCEEE-EcCCCCCChHHHHHhhcCCCCeEEE
Q 024619 50 TRSGNP-TRDALESLLAKLDKAD---RALCFTSGMAALAAVTHL--LGTGEEIV-AGDDLYGGTDRLLSRVTPKTGVVVK 122 (265)
Q Consensus 50 ~~~g~~-~~~~l~~~l~~~~g~~---~~i~~~~g~~al~~~~~~--~~~g~~vi-v~~~~~~~~~~~~~~~~~~~g~~~~ 122 (265)
+..|.. ..+.|.+.+.+.+|.+ .++++..|..+..++..+ -+.|-.++ +.+..-..-. ......|+++.
T Consensus 60 G~~g~GY~V~~L~~~i~~~Lg~~~~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~ki----G~~~i~GvpV~ 135 (212)
T 3keo_A 60 GRRGFGYDVKKLMNFFAEILNDHSTTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLV----GKTTEDGIPVY 135 (212)
T ss_dssp TTTSSSEEHHHHHHHHHHHTTTTSCEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTT----TCBCTTCCBEE
T ss_pred CCCCCCEEHHHHHHHHHHHhCCCCCCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhcc----CceeECCeEEe
Confidence 333443 3888889999998866 488888887665544432 22343333 3332210010 00023465554
Q ss_pred eecCCCHHHHHhhcC-CCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 024619 123 RVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (265)
Q Consensus 123 ~~~~~d~~~l~~~~~-~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~ 177 (265)
. .+++.+.+. .++..++++-|+. ..+++++.+.+.|+.-|+.=+
T Consensus 136 ~-----~~dL~~~v~~~~Id~vIIAvPs~------~aq~v~d~lv~~GIk~I~nFa 180 (212)
T 3keo_A 136 G-----ISTINDHLIDSDIETAILTVPST------EAQEVADILVKAGIKGILSFS 180 (212)
T ss_dssp E-----GGGHHHHC-CCSCCEEEECSCGG------GHHHHHHHHHHHTCCEEEECS
T ss_pred C-----HHHHHHHHHHcCCCEEEEecCch------hHHHHHHHHHHcCCCEEEEcC
Confidence 2 355555555 3678888887754 357899999999998888755
No 277
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=61.02 E-value=16 Score=28.86 Aligned_cols=91 Identities=11% Similarity=0.031 Sum_probs=51.6
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccHHH
Q 024619 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (265)
Q Consensus 81 ~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~ 160 (265)
+++..+......|.+|++..|.-.... . .......|.+.......+.+++.+.+ .+..+|++.=.+..++ +.+
T Consensus 35 ~lL~~~~r~~~~g~kvli~kp~~D~Ry-g-~~i~sr~G~~~~a~~i~~~~di~~~~-~~~dvViIDEaQF~~~----v~e 107 (234)
T 2orv_A 35 ELMRRVRRFQIAQYKCLVIKYAKDTRY-S-SSFCTHDRNTMEALPACLLRDVAQEA-LGVAVIGIDEGQFFPD----IVE 107 (234)
T ss_dssp HHHHHHHHHHTTTCCEEEEEETTCCCC-------------CEEEEESSGGGGHHHH-TTCSEEEESSGGGCTT----HHH
T ss_pred HHHHHHHHHHHCCCeEEEEeecCCccc-h-HHHHhhcCCeeEEEecCCHHHHHHHh-ccCCEEEEEchhhhhh----HHH
Confidence 445566666667777776655432211 0 13334446665554444445554444 4578888877776653 888
Q ss_pred HHHHHHHcCCEEEEeCCc
Q 024619 161 IAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 161 i~~~a~~~~~~li~D~~~ 178 (265)
++++..+.|+.||+-+-.
T Consensus 108 l~~~l~~~gi~VI~~GL~ 125 (234)
T 2orv_A 108 FCEAMANAGKTVIVAALD 125 (234)
T ss_dssp HHHHHHHTTCEEEEECCS
T ss_pred HHHHHHhCCCEEEEEecc
Confidence 888888899999987554
No 278
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=60.58 E-value=10 Score=26.83 Aligned_cols=87 Identities=17% Similarity=0.096 Sum_probs=53.0
Q ss_pred ceEEecchHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCC
Q 024619 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (265)
Q Consensus 72 ~~i~~~~g~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np 151 (265)
.++++..|.-+..+...+.+.|..|++.+..-. .... ++..|..++.-+..+.+.++++--.+..++++..++..
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~----~~~~-~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDIPLVVIETSRT----RVDE-LRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGY 83 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH----HHHH-HHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHH
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH----HHHH-HHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChH
Confidence 578888888777666666666766655444321 1112 23468888888888888887653356777776655321
Q ss_pred ccccccHHHHHHHHHHc
Q 024619 152 RQQICDIRKIAEMAHAH 168 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~ 168 (265)
.-..++..+++.
T Consensus 84 -----~n~~~~~~a~~~ 95 (140)
T 3fwz_A 84 -----EAGEIVASARAK 95 (140)
T ss_dssp -----HHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHH
Confidence 123345566664
No 279
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=60.41 E-value=12 Score=30.42 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=26.8
Q ss_pred ceEEecchHHHHHHHHHhcCCCCEEEEcCCCCC
Q 024619 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYG 104 (265)
Q Consensus 72 ~~i~~~~g~~al~~~~~~~~~g~~viv~~~~~~ 104 (265)
.++++++|..|...+..+++.|-.|.+.+|...
T Consensus 15 ~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 15 RILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp EEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred EEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 588888898999888899999988877666543
No 280
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=59.58 E-value=34 Score=29.02 Aligned_cols=114 Identities=8% Similarity=0.009 Sum_probs=71.4
Q ss_pred HHHHHHHhHhCCCceEEec--ch---HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHH
Q 024619 59 ALESLLAKLDKADRALCFT--SG---MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEV 132 (265)
Q Consensus 59 ~l~~~l~~~~g~~~~i~~~--~g---~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l 132 (265)
+.-+.+.+..|.+-.+.+. ++ .+++..+.. +++-+...+++|..+.....+..+.+..++.+.... ..+++++
T Consensus 187 e~v~avr~a~G~d~~l~vD~n~~~~~~~a~~~~~~-l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~ 265 (392)
T 2poz_A 187 RRVKAVRDAAGPEIELMVDLSGGLTTDETIRFCRK-IGELDICFVEEPCDPFDNGALKVISEQIPLPIAVGERVYTRFGF 265 (392)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHH-HGGGCEEEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHH-HHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHH
Confidence 3445556667777544443 33 244444444 444456678888765555555455444555554443 3368888
Q ss_pred HhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEe
Q 024619 133 ASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 133 ~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D 175 (265)
++.+..+ ..+|.+- + +..|.+.+..+++++|+++|+.++.=
T Consensus 266 ~~~i~~~~~d~v~ik-~-~~~GGit~~~~i~~~A~~~g~~~~~h 307 (392)
T 2poz_A 266 RKIFELQACGIIQPD-I-GTAGGLMETKKICAMAEAYNMRVAPH 307 (392)
T ss_dssp HHHHTTTCCSEECCC-T-TTSSCHHHHHHHHHHHHTTTCEECCC
T ss_pred HHHHHcCCCCEEecC-c-cccCCHHHHHHHHHHHHHcCCeEecC
Confidence 8888754 4444432 3 55788999999999999999988773
No 281
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=59.56 E-value=33 Score=23.65 Aligned_cols=90 Identities=14% Similarity=-0.011 Sum_probs=49.9
Q ss_pred ceEEecchHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCC
Q 024619 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (265)
Q Consensus 72 ~~i~~~~g~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np 151 (265)
.++++..|.-+..++..+.+.|..|++.+.. .... ..++..+..+...+..+.+.+.++-..+..+|+.+.+...
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~----~~~~-~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~ 82 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDIN----EEKV-NAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANI 82 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESC----HHHH-HTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCC----HHHH-HHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCch
Confidence 4777777776666666665566555543332 1112 2234456666666777777776652245677776655321
Q ss_pred ccccccHHHHHHHHHHcCC
Q 024619 152 RQQICDIRKIAEMAHAHGA 170 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~~~ 170 (265)
..-..++..+++.+.
T Consensus 83 ----~~~~~~~~~~~~~~~ 97 (144)
T 2hmt_A 83 ----QASTLTTLLLKELDI 97 (144)
T ss_dssp ----HHHHHHHHHHHHTTC
T ss_pred ----HHHHHHHHHHHHcCC
Confidence 111346666776653
No 282
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=59.34 E-value=22 Score=27.70 Aligned_cols=36 Identities=19% Similarity=0.124 Sum_probs=28.8
Q ss_pred CCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEE
Q 024619 138 PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (265)
Q Consensus 138 ~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~ 174 (265)
-.+.+|+.+-. |..|....+.++.++|++||+.++.
T Consensus 166 l~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 166 FKPAGVLCELT-NDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp SCSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred CCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEEE
Confidence 34666665544 7789999999999999999998874
No 283
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=58.96 E-value=36 Score=28.32 Aligned_cols=94 Identities=18% Similarity=0.145 Sum_probs=54.1
Q ss_pred eEEecchHHHH--HHHHHhcCCC-CEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCC
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g-~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~ 149 (265)
.+++++|+..+ .++..+++.| ..|++..-.-.... .......+++++..++.|.+.+.+++. ++.+|+-+...
T Consensus 34 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---~~l~~~~~v~~~~~Dl~d~~~l~~~~~-~~d~Vih~A~~ 109 (377)
T 2q1s_A 34 NVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK---INVPDHPAVRFSETSITDDALLASLQD-EYDYVFHLATY 109 (377)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG---GGSCCCTTEEEECSCTTCHHHHHHCCS-CCSEEEECCCC
T ss_pred EEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCch---hhccCCCceEEEECCCCCHHHHHHHhh-CCCEEEECCCc
Confidence 46666655444 4667777778 77775433221111 011113467788888889999988876 56666554432
Q ss_pred CCccc-c-----------ccHHHHHHHHHHc-CC
Q 024619 150 NPRQQ-I-----------CDIRKIAEMAHAH-GA 170 (265)
Q Consensus 150 np~G~-~-----------~~l~~i~~~a~~~-~~ 170 (265)
..... . .-...+++.|++. ++
T Consensus 110 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~ 143 (377)
T 2q1s_A 110 HGNQSSIHDPLADHENNTLTTLKLYERLKHFKRL 143 (377)
T ss_dssp SCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSC
T ss_pred cCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 21110 0 1135688888887 65
No 284
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=58.51 E-value=18 Score=27.51 Aligned_cols=89 Identities=11% Similarity=0.041 Sum_probs=54.3
Q ss_pred eEEecchHHHH--HHHHHhc-CCCCEEEEcCCCCCChHH-HHHhhc-CCCCeEEEeecCCCHHHHHhhcCCCceEEEEec
Q 024619 73 ALCFTSGMAAL--AAVTHLL-GTGEEIVAGDDLYGGTDR-LLSRVT-PKTGVVVKRVNTCDLDEVASAIGPWTKLVWVES 147 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~-~~g~~viv~~~~~~~~~~-~~~~~~-~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~ 147 (265)
.+++++++..+ .++..+. +.|..|++..-. .. ...... ...+++++..|+.|.+++.+++. +..+|+.+.
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~vv~~a 81 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQ----LKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVT-NAEVVFVGA 81 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS----HHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHT-TCSEEEESC
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC----ccccchhhccCCCceEEEECCCCCHHHHHHHHc-CCCEEEEcC
Confidence 35566655444 5667777 788877754322 11 111111 34578888889999999998885 456555433
Q ss_pred CCCCccccccHHHHHHHHHHcCC
Q 024619 148 PTNPRQQICDIRKIAEMAHAHGA 170 (265)
Q Consensus 148 ~~np~G~~~~l~~i~~~a~~~~~ 170 (265)
... .+. .+.+++.+++.+.
T Consensus 82 g~~---n~~-~~~~~~~~~~~~~ 100 (221)
T 3r6d_A 82 MES---GSD-MASIVKALSRXNI 100 (221)
T ss_dssp CCC---HHH-HHHHHHHHHHTTC
T ss_pred CCC---Chh-HHHHHHHHHhcCC
Confidence 211 122 7888999998875
No 285
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=58.24 E-value=6.5 Score=25.59 Aligned_cols=21 Identities=14% Similarity=0.159 Sum_probs=18.5
Q ss_pred HHHHHHHHHHcCCEEEEeCCc
Q 024619 158 IRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 158 l~~i~~~a~~~~~~li~D~~~ 178 (265)
-++|.++|+++|++++.|-.-
T Consensus 29 A~~I~~~A~e~~VPi~e~~~L 49 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIPL 49 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHH
Confidence 388999999999999999653
No 286
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=58.11 E-value=30 Score=29.58 Aligned_cols=114 Identities=10% Similarity=-0.004 Sum_probs=71.5
Q ss_pred HHHHHHHhHhCCCceEEec--ch---HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHH
Q 024619 59 ALESLLAKLDKADRALCFT--SG---MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEV 132 (265)
Q Consensus 59 ~l~~~l~~~~g~~~~i~~~--~g---~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l 132 (265)
+.-+.+.+.+|.+-.+.+. +| .+++..+.. +++-+...+++|..+.....+..+.+..++.+.... ..+++++
T Consensus 206 e~v~avR~a~G~d~~l~vDan~~~~~~~ai~~~~~-l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~ 284 (410)
T 2gl5_A 206 ARIAAMREAMGDDADIIVEIHSLLGTNSAIQFAKA-IEKYRIFLYEEPIHPLNSDNMQKVSRSTTIPIATGERSYTRWGY 284 (410)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHH-HGGGCEEEEECSSCSSCHHHHHHHHHHCSSCEEECTTCCTTHHH
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHH-HHhcCCCeEECCCChhhHHHHHHHHhhCCCCEEecCCcCCHHHH
Confidence 3445556667777544443 33 244444444 444456678888765555555555454555554443 3477888
Q ss_pred HhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEe
Q 024619 133 ASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 133 ~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D 175 (265)
++.+..+ ..+|.+. + +..|.+....+++++|+++|+.++.=
T Consensus 285 ~~~i~~~~~d~v~ik-~-~~~GGit~~~~ia~~A~~~gi~~~~h 326 (410)
T 2gl5_A 285 RELLEKQSIAVAQPD-L-CLCGGITEGKKICDYANIYDTTVQVH 326 (410)
T ss_dssp HHHHHTTCCSEECCC-T-TTTTHHHHHHHHHHHHHTTTCEECCC
T ss_pred HHHHHcCCCCEEecC-c-cccCCHHHHHHHHHHHHHcCCeEeec
Confidence 8887644 4444432 3 55788999999999999999988773
No 287
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=57.90 E-value=6.9 Score=34.09 Aligned_cols=83 Identities=12% Similarity=0.048 Sum_probs=50.2
Q ss_pred CCCCEEEEcCCCCCChHHHH---HhhcCCCCeEEEeecCCCHHHH------Hhhc-CCCceEEEEecCCCCccccccHHH
Q 024619 91 GTGEEIVAGDDLYGGTDRLL---SRVTPKTGVVVKRVNTCDLDEV------ASAI-GPWTKLVWVESPTNPRQQICDIRK 160 (265)
Q Consensus 91 ~~g~~viv~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~d~~~l------~~~~-~~~~~~i~~~~~~np~G~~~~l~~ 160 (265)
.+|..||+---.+. +..+. ...++..|++-+.++... |.+ ..-. .=.+.- + .+.+.-|...++++
T Consensus 7 ~~g~~~i~~~f~W~-w~~ia~e~~~yl~~~G~~~v~~~P~~-e~~~~~~~~~~~~~~Y~~~d-y--~i~~~~Gt~~df~~ 81 (496)
T 4gqr_A 7 QQGRTSIVHLFEWR-WVDIALECERYLAPKGFGGVQVSPPN-ENVAIYNPFRPWWERYQPVS-Y--KLCTRSGNEDEFRN 81 (496)
T ss_dssp CTTCCEEEEETTCC-HHHHHHHHHHTTTTTTCCEEEECCCS-CBBCCTTTTSCGGGGGSBSC-S--CSCBTTBCHHHHHH
T ss_pred CCCCcEEEEecCCC-HHHHHHHHHHHHHHhCCCEEEeCccc-cCccCCCCCCCcccccCccC-c--eeCCCCCCHHHHHH
Confidence 45666777666653 33332 244677888888876431 000 0000 000000 1 23455688889999
Q ss_pred HHHHHHHcCCEEEEeCCc
Q 024619 161 IAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 161 i~~~a~~~~~~li~D~~~ 178 (265)
+++.|+++|+.||.|-++
T Consensus 82 lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 82 MVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp HHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHCCCEEEEEEcc
Confidence 999999999999999885
No 288
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=57.66 E-value=36 Score=27.82 Aligned_cols=86 Identities=19% Similarity=0.043 Sum_probs=52.2
Q ss_pred eEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecC-C
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP-T 149 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~-~ 149 (265)
.+++++|+..+ .++..|++.|..|++..-.-. ..+++++..++.|.+.+.+++. ++.+|+-+.. .
T Consensus 21 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-~~d~vih~A~~~ 88 (347)
T 4id9_A 21 MILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS-----------GTGGEEVVGSLEDGQALSDAIM-GVSAVLHLGAFM 88 (347)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC-----------SSCCSEEESCTTCHHHHHHHHT-TCSEEEECCCCC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC-----------CCCccEEecCcCCHHHHHHHHh-CCCEEEECCccc
Confidence 45666665444 567777777877765322111 1456778888999999998886 4555554332 2
Q ss_pred CCcccc---------ccHHHHHHHHHHcCC
Q 024619 150 NPRQQI---------CDIRKIAEMAHAHGA 170 (265)
Q Consensus 150 np~G~~---------~~l~~i~~~a~~~~~ 170 (265)
.+.... .-...+++.|++.++
T Consensus 89 ~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 118 (347)
T 4id9_A 89 SWAPADRDRMFAVNVEGTRRLLDAASAAGV 118 (347)
T ss_dssp CSSGGGHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 222111 113678889998876
No 289
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=57.08 E-value=38 Score=26.80 Aligned_cols=75 Identities=13% Similarity=0.183 Sum_probs=41.0
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCC----CCeEEEeecCCCHHHHHhhcC------CC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK----TGVVVKRVNTCDLDEVASAIG------PW 139 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~----~g~~~~~~~~~d~~~l~~~~~------~~ 139 (265)
..+++++|+..+ .++..+.+.|..|++..-.-....... ..++. ..+.+..+|+.|.+++++.+. .+
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 111 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSG 111 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHH-HHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 467777776665 466777788888776432211111111 11111 124556677888888776654 24
Q ss_pred ceEEEEec
Q 024619 140 TKLVWVES 147 (265)
Q Consensus 140 ~~~i~~~~ 147 (265)
..+|+-+.
T Consensus 112 iD~vi~~A 119 (279)
T 1xg5_A 112 VDICINNA 119 (279)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 56655443
No 290
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=57.05 E-value=18 Score=29.64 Aligned_cols=98 Identities=9% Similarity=0.049 Sum_probs=54.0
Q ss_pred eEEecchHHHH--HHHHHhcCCC--CEEEE-cCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC-CceEEEEe
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTG--EEIVA-GDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVE 146 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g--~~viv-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~-~~~~i~~~ 146 (265)
.+++++|+..+ .++..+++.| -.|+. ...........+.......+++++..++.|.+.+.+++.. ++.+|+-+
T Consensus 26 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 105 (346)
T 4egb_A 26 NILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVIVNF 105 (346)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEEEEC
T ss_pred eEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEEEEC
Confidence 46666665444 4666777766 45554 3222122111111222235788889999999999888763 45565544
Q ss_pred cCCCCcccc------------ccHHHHHHHHHHcCC
Q 024619 147 SPTNPRQQI------------CDIRKIAEMAHAHGA 170 (265)
Q Consensus 147 ~~~np~G~~------------~~l~~i~~~a~~~~~ 170 (265)
......+.. .-...+++.|+++++
T Consensus 106 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 141 (346)
T 4egb_A 106 AAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPH 141 (346)
T ss_dssp CCCC---------CHHHHHHTHHHHHHHHHHHHSTT
T ss_pred CcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 332211111 113678899999875
No 291
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=56.99 E-value=18 Score=28.36 Aligned_cols=42 Identities=12% Similarity=0.022 Sum_probs=31.1
Q ss_pred HHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEE
Q 024619 132 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (265)
Q Consensus 132 l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~ 174 (265)
|.++..-.+.+|+.+-. |..|....++++.++|++||+.++.
T Consensus 171 LarlAGl~Pa~VicEi~-~ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 171 LAELANLVPITTICEMM-GDDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp HHHHTTSCSEEEEEEEB-CTTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred HHHHcCCCceEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 33333334566655544 7789999999999999999998874
No 292
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=56.80 E-value=57 Score=25.71 Aligned_cols=61 Identities=15% Similarity=0.188 Sum_probs=40.3
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~ 137 (265)
...++|+|+.++ .+...|.+.|-.|++.+-.-... .......+....+|+.|.+++++.+.
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~-----~~~~~~~~~~~~~Dv~~~~~v~~~~~ 74 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV-----HAPRHPRIRREELDITDSQRLQRLFE 74 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST-----TSCCCTTEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-----hhhhcCCeEEEEecCCCHHHHHHHHH
Confidence 467777777777 46788889998888754332221 22233456667778888888887765
No 293
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=56.67 E-value=56 Score=25.59 Aligned_cols=89 Identities=15% Similarity=0.057 Sum_probs=54.2
Q ss_pred eEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCC
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~n 150 (265)
.+++|+++..+ .++..+.+.|..|++.+-.-. .....+++++..|+.|.+++.+.+. +..+|+-+....
T Consensus 5 ~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~--------~~~~~~~~~~~~Dl~d~~~~~~~~~-~~D~vi~~Ag~~ 75 (267)
T 3rft_A 5 RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPL--------DPAGPNEECVQCDLADANAVNAMVA-GCDGIVHLGGIS 75 (267)
T ss_dssp EEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCC--------CCCCTTEEEEECCTTCHHHHHHHHT-TCSEEEECCSCC
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCc--------cccCCCCEEEEcCCCCHHHHHHHHc-CCCEEEECCCCc
Confidence 46677766555 466778888877775432211 1123567888889999999998886 466655443222
Q ss_pred Cccccc--------cHHHHHHHHHHcCC
Q 024619 151 PRQQIC--------DIRKIAEMAHAHGA 170 (265)
Q Consensus 151 p~G~~~--------~l~~i~~~a~~~~~ 170 (265)
...... -...+.+.|++++.
T Consensus 76 ~~~~~~~~~~~N~~g~~~l~~a~~~~~~ 103 (267)
T 3rft_A 76 VEKPFEQILQGNIIGLYNLYEAARAHGQ 103 (267)
T ss_dssp SCCCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 221111 12467888888764
No 294
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=56.13 E-value=46 Score=26.27 Aligned_cols=62 Identities=11% Similarity=0.094 Sum_probs=40.1
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhc-CCCCeEEEeecCCCHHHHHhhcC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT-PKTGVVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~d~~~l~~~~~ 137 (265)
..+++|+|+.++ .+...|.+.|..|++.+-.- . ...... +..+.....+|+.|.+++++.+.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~---~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~ 67 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDE---K-RSADFAKERPNLFYFHGDVADPLTLKKFVE 67 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---H-HHHHHHTTCTTEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH---H-HHHHHHHhcCCEEEEEecCCCHHHHHHHHH
Confidence 467788888777 46778889998888754332 1 112222 33356666778888888777664
No 295
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=56.02 E-value=28 Score=27.73 Aligned_cols=69 Identities=13% Similarity=0.089 Sum_probs=40.9
Q ss_pred hCCC-ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEe--ecCCCHHHHHhhcC
Q 024619 68 DKAD-RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKR--VNTCDLDEVASAIG 137 (265)
Q Consensus 68 ~g~~-~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~d~~~l~~~~~ 137 (265)
|..+ ...++|+|+.++ .+...|.+.|..|++.+-.-....+.. ..++..|.+... +|+.|.+++++.+.
T Consensus 5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~-~~l~~~g~~~~~~~~Dv~~~~~v~~~~~ 78 (255)
T 4g81_D 5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESV-DTLTRKGYDAHGVAFDVTDELAIEAAFS 78 (255)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-HHHHHTTCCEEECCCCTTCHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHhcCCcEEEEEeeCCCHHHHHHHHH
Confidence 4434 477888888777 467888899999888654322222222 222333444444 45668777776654
No 296
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=55.63 E-value=68 Score=27.01 Aligned_cols=114 Identities=9% Similarity=-0.026 Sum_probs=70.3
Q ss_pred HHHHHHHhHhCCCceEEec--ch---HHHHHHHHHhcCCC-CEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHH
Q 024619 59 ALESLLAKLDKADRALCFT--SG---MAALAAVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDE 131 (265)
Q Consensus 59 ~l~~~l~~~~g~~~~i~~~--~g---~~al~~~~~~~~~g-~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~ 131 (265)
+.-+.+.+.+|.+-.+.+. +| .+++..+.. +++- +...+++|.-+.....+..+.+..++.+.... ..++++
T Consensus 172 e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~-l~~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~ 250 (382)
T 2gdq_A 172 RHINALQHTAGSSITMILDANQSYDAAAAFKWERY-FSEWTNIGWLEEPLPFDQPQDYAMLRSRLSVPVAGGENMKGPAQ 250 (382)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTCCCHHHHHTTHHH-HTTCSCEEEEECCSCSSCHHHHHHHHTTCSSCEEECTTCCSHHH
T ss_pred HHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHH-HhhccCCeEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHHH
Confidence 4445566667776444443 23 134434443 4444 56678888765555555555555555554433 346788
Q ss_pred HHhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEe
Q 024619 132 VASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 132 l~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D 175 (265)
+++.+..+ ..+|.+- + +..|.+....+++++|+++|+.++.=
T Consensus 251 ~~~~i~~~~~d~v~ik-~-~~~GGit~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 251 YVPLLSQRCLDIIQPD-V-MHVNGIDEFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp HHHHHHTTCCSEECCC-T-TTTTHHHHHHHHHHHHHHHTCEECCC
T ss_pred HHHHHHcCCCCEEecC-c-cccCCHHHHHHHHHHHHHcCCEEeec
Confidence 88877643 4444432 3 55788889999999999999987765
No 297
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=55.58 E-value=39 Score=29.33 Aligned_cols=97 Identities=11% Similarity=0.145 Sum_probs=56.0
Q ss_pred ceEEecchHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCC-CeEEEeecCCCHHHHHhhcCCCceEEEEecCCC
Q 024619 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT-GVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (265)
Q Consensus 72 ~~i~~~~g~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~n 150 (265)
.++++.+|..+-.++..+.+.|..|.+.+-.- ......++.. +.....++..|.+++.+.+. +..+|+.+.+..
T Consensus 5 ~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~----~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~-~~DvVIn~a~~~ 79 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTDSGIKVTVACRTL----ESAKKLSAGVQHSTPISLDVNDDAALDAEVA-KHDLVISLIPYT 79 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHTTTCEEEEEESSH----HHHHHTTTTCTTEEEEECCTTCHHHHHHHHT-TSSEEEECCC--
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEECCH----HHHHHHHHhcCCceEEEeecCCHHHHHHHHc-CCcEEEECCccc
Confidence 35666655544455555666777777654321 1222333433 36666778888888887775 577777666543
Q ss_pred Ccc----------cc-c-------cHHHHHHHHHHcCCEEE
Q 024619 151 PRQ----------QI-C-------DIRKIAEMAHAHGALLL 173 (265)
Q Consensus 151 p~G----------~~-~-------~l~~i~~~a~~~~~~li 173 (265)
..+ .. . ...++.+.|++.|+.++
T Consensus 80 ~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~i 120 (450)
T 1ff9_A 80 FHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVM 120 (450)
T ss_dssp CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEEE
T ss_pred cchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeEE
Confidence 321 10 0 24677888888887754
No 298
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=55.36 E-value=24 Score=28.31 Aligned_cols=93 Identities=13% Similarity=0.082 Sum_probs=54.3
Q ss_pred EEecchH--HHHHHHHHhcCCCCEEEE-cCCCCCC----hHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEe
Q 024619 74 LCFTSGM--AALAAVTHLLGTGEEIVA-GDDLYGG----TDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (265)
Q Consensus 74 i~~~~g~--~al~~~~~~~~~g~~viv-~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~ 146 (265)
+++++|+ .+-.++..+++.|..|.+ ....... ....+ ......|++++..|+.|.+.+.+++.. ...|+.+
T Consensus 7 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~-~~l~~~~v~~v~~D~~d~~~l~~~~~~-~d~vi~~ 84 (308)
T 1qyc_A 7 ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLL-ESFKASGANIVHGSIDDHASLVEAVKN-VDVVIST 84 (308)
T ss_dssp EEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHH-HHHHTTTCEEECCCTTCHHHHHHHHHT-CSEEEEC
T ss_pred EEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHH-HHHHhCCCEEEEeccCCHHHHHHHHcC-CCEEEEC
Confidence 4455544 444566777777766654 4432211 11111 112346889999999999999888753 5555543
Q ss_pred cCCCCccccccHHHHHHHHHHcC-CE
Q 024619 147 SPTNPRQQICDIRKIAEMAHAHG-AL 171 (265)
Q Consensus 147 ~~~np~G~~~~l~~i~~~a~~~~-~~ 171 (265)
.... .+.....+++.|++.+ +-
T Consensus 85 a~~~---~~~~~~~l~~aa~~~g~v~ 107 (308)
T 1qyc_A 85 VGSL---QIESQVNIIKAIKEVGTVK 107 (308)
T ss_dssp CCGG---GSGGGHHHHHHHHHHCCCS
T ss_pred Ccch---hhhhHHHHHHHHHhcCCCc
Confidence 3211 1334578899999987 53
No 299
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=55.14 E-value=34 Score=27.69 Aligned_cols=92 Identities=14% Similarity=0.120 Sum_probs=52.0
Q ss_pred EEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC-CceEEEEecCCC
Q 024619 74 LCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTN 150 (265)
Q Consensus 74 i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~~~n 150 (265)
+++++|+..+ .++..+.+.|..|++.+-.-.... .... .+++++..++.|.+.+.+++.. ++..|+-+....
T Consensus 4 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~ 78 (330)
T 2c20_A 4 ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE----DAIT-EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADS 78 (330)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG----GGSC-TTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCC
T ss_pred EEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch----hhcC-CCcEEEECCCCCHHHHHHHHhhcCCCEEEECCccc
Confidence 4555555444 466777777877765332111111 1112 2678888898899988887753 566665443322
Q ss_pred Cccc-c-----------ccHHHHHHHHHHcCC
Q 024619 151 PRQQ-I-----------CDIRKIAEMAHAHGA 170 (265)
Q Consensus 151 p~G~-~-----------~~l~~i~~~a~~~~~ 170 (265)
..+. . .-...+++.|++.++
T Consensus 79 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 110 (330)
T 2c20_A 79 LVGVSMEKPLQYYNNNVYGALCLLEVMDEFKV 110 (330)
T ss_dssp CHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CccccccCHHHHHHHHhHHHHHHHHHHHHcCC
Confidence 2111 0 113568888888875
No 300
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=55.07 E-value=17 Score=30.27 Aligned_cols=97 Identities=10% Similarity=-0.009 Sum_probs=55.1
Q ss_pred eEEecchH--HHHHHHHHhcCC-CCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-CHHHHHhhcCCCceEEEEecC
Q 024619 73 ALCFTSGM--AALAAVTHLLGT-GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIGPWTKLVWVESP 148 (265)
Q Consensus 73 ~i~~~~g~--~al~~~~~~~~~-g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~~~~~~~~i~~~~~ 148 (265)
.+++++|+ -+-.++..+++. |..|++..-.-... .......+++++..|+. |.+.+.+++. ++..|+-+..
T Consensus 26 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~----~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-~~d~Vih~A~ 100 (372)
T 3slg_A 26 KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL----GDLVKHERMHFFEGDITINKEWVEYHVK-KCDVILPLVA 100 (372)
T ss_dssp EEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTT----GGGGGSTTEEEEECCTTTCHHHHHHHHH-HCSEEEECBC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhh----hhhccCCCeEEEeCccCCCHHHHHHHhc-cCCEEEEcCc
Confidence 45555554 344566667665 77766533222211 13334468899999998 8888888775 4555554332
Q ss_pred C-CCcccc-----------ccHHHHHHHHHHcCCEEEE
Q 024619 149 T-NPRQQI-----------CDIRKIAEMAHAHGALLLV 174 (265)
Q Consensus 149 ~-np~G~~-----------~~l~~i~~~a~~~~~~li~ 174 (265)
. ++.... .-...+++.|++.+..+|.
T Consensus 101 ~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~ 138 (372)
T 3slg_A 101 IATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVF 138 (372)
T ss_dssp CCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEE
T ss_pred cccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEE
Confidence 2 221111 1136788888888754443
No 301
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=54.89 E-value=45 Score=25.48 Aligned_cols=76 Identities=11% Similarity=0.115 Sum_probs=43.8
Q ss_pred eEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhc--CCCCeEEEeecCCCHHHHHhhcCC------CceE
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT--PKTGVVVKRVNTCDLDEVASAIGP------WTKL 142 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~d~~~l~~~~~~------~~~~ 142 (265)
.+++++|+..+ .+...+.+.|..|++..-............. ....+.+..+|+.|.+++.+.+.. +..+
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 83 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDV 83 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence 56677776665 4677788889887765433222211111111 123456666788899998888762 4566
Q ss_pred EEEecC
Q 024619 143 VWVESP 148 (265)
Q Consensus 143 i~~~~~ 148 (265)
++-+..
T Consensus 84 li~~Ag 89 (235)
T 3l77_A 84 VVANAG 89 (235)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 555443
No 302
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=54.45 E-value=24 Score=25.88 Aligned_cols=66 Identities=12% Similarity=0.083 Sum_probs=45.9
Q ss_pred CCCChHHHHHhhcCCCCeEEEeecCC-CHHHHHhhcC-CCceEEEEecCCCCccccccHHHHHHHHHHcC
Q 024619 102 LYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHG 169 (265)
Q Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~~~-~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~ 169 (265)
.|.--...+...++..|.++++.... +++++.+++. .++.+|.++.... .....++++++..++.+
T Consensus 30 ~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS~~~~--~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 30 GHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVSILNG--AHLHLMKRLMAKLRELG 97 (161)
T ss_dssp SCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEEESSS--CHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEeech--hhHHHHHHHHHHHHhcC
Confidence 33333344556678899999988753 6777776664 6788888876643 34567888888888864
No 303
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=54.33 E-value=29 Score=27.09 Aligned_cols=40 Identities=15% Similarity=0.007 Sum_probs=20.2
Q ss_pred CHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEE
Q 024619 128 DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (265)
Q Consensus 128 d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~ 174 (265)
+.+.+.+.+.-+.....+.++ .++++.++.+++.|+-+|+
T Consensus 120 ~~~~i~~ll~~~i~~~~~~~~-------ee~~~~i~~l~~~G~~vVV 159 (225)
T 2pju_A 120 ALVAFQKTFNLRLDQRSYITE-------EDARGQINELKANGTEAVV 159 (225)
T ss_dssp HHHHHHHHHTCCEEEEEESSH-------HHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhCCceEEEEeCCH-------HHHHHHHHHHHHCCCCEEE
Confidence 455566655544443332211 2456666666666665544
No 304
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=54.01 E-value=39 Score=24.91 Aligned_cols=92 Identities=13% Similarity=0.053 Sum_probs=52.4
Q ss_pred eEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCC
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~n 150 (265)
.+++++++..+ .++..+.+.|.+|++..-.-... ......+++++..++.|.+.+.+.+.. ...|+.+....
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~-~d~vi~~a~~~ 78 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL-----PSEGPRPAHVVVGDVLQAADVDKTVAG-QDAVIVLLGTR 78 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS-----CSSSCCCSEEEESCTTSHHHHHHHHTT-CSEEEECCCCT
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhc-----ccccCCceEEEEecCCCHHHHHHHHcC-CCEEEECccCC
Confidence 45566555444 56677777787776533221111 111134678888899999999888753 55555433221
Q ss_pred Ccccc-----ccHHHHHHHHHHcCC
Q 024619 151 PRQQI-----CDIRKIAEMAHAHGA 170 (265)
Q Consensus 151 p~G~~-----~~l~~i~~~a~~~~~ 170 (265)
..-.. .-...+++.+++.++
T Consensus 79 ~~~~~~~~n~~~~~~~~~~~~~~~~ 103 (206)
T 1hdo_A 79 NDLSPTTVMSEGARNIVAAMKAHGV 103 (206)
T ss_dssp TCCSCCCHHHHHHHHHHHHHHHHTC
T ss_pred CCCCccchHHHHHHHHHHHHHHhCC
Confidence 11011 124678888888765
No 305
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=53.89 E-value=75 Score=25.92 Aligned_cols=36 Identities=11% Similarity=0.177 Sum_probs=20.6
Q ss_pred ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeC
Q 024619 140 TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDN 176 (265)
Q Consensus 140 ~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~ 176 (265)
..+++-+.|.. ||.-.+.+.+.++++--++.=|=|.
T Consensus 143 lPiilYn~P~~-tg~~l~~~~~~~La~~pnIvgiKds 178 (307)
T 3s5o_A 143 IPVVLYSVPAN-TGLDLPVDAVVTLSQHPNIVGMXDS 178 (307)
T ss_dssp SCEEEEECHHH-HSCCCCHHHHHHHHTSTTEEEEEEC
T ss_pred CCEEEEeCCcc-cCCCCCHHHHHHHhcCCCEEEEEcC
Confidence 45566565543 6776777777777742244444443
No 306
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=53.72 E-value=25 Score=24.22 Aligned_cols=89 Identities=11% Similarity=0.004 Sum_probs=50.6
Q ss_pred ceEEecchHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCC
Q 024619 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (265)
Q Consensus 72 ~~i~~~~g~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np 151 (265)
.++++..|.-+..++..+.+.|..|.+.+..- .. .....+..+..+...+..+.+.+.+..-.+..+|+++.+..
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~-~~---~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~- 80 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK-DI---CKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE- 80 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCH-HH---HHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH-
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH-HH---HHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc-
Confidence 36677777766666666666677676544321 11 12222233666666666677777655335677887775432
Q ss_pred ccccccHHHHHHHHHHcC
Q 024619 152 RQQICDIRKIAEMAHAHG 169 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~~ 169 (265)
..-..+.+++++.+
T Consensus 81 ----~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 81 ----EVNLMSSLLAKSYG 94 (140)
T ss_dssp ----HHHHHHHHHHHHTT
T ss_pred ----hHHHHHHHHHHHcC
Confidence 11134566677655
No 307
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=53.56 E-value=73 Score=26.50 Aligned_cols=84 Identities=10% Similarity=0.038 Sum_probs=47.1
Q ss_pred CCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHHHhhcCC-CceEEEEecCCCCccccccHHHHHHHHHHcCC
Q 024619 93 GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGA 170 (265)
Q Consensus 93 g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l~~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~ 170 (265)
-+...+++|..+.....+..+.+..++.+..-. ..+.+++++.+.. ...+|.+. + +..|.+....+++++|+++|+
T Consensus 209 ~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k-~-~~~GGit~~~~i~~~A~~~gi 286 (354)
T 3jva_A 209 YQIELVEQPVKRRDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIK-L-MKCGGIHEALKINQICETAGI 286 (354)
T ss_dssp SCEEEEECCSCTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEEC-H-HHHTSHHHHHHHHHHHHHTTC
T ss_pred cCCCEEECCCChhhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEEC-c-hhcCCHHHHHHHHHHHHHcCC
Confidence 344456666544333333333333344333222 2356666666543 34444432 2 335777788999999999999
Q ss_pred EEEEeCCc
Q 024619 171 LLLVDNSI 178 (265)
Q Consensus 171 ~li~D~~~ 178 (265)
.+..-...
T Consensus 287 ~~~~~~~~ 294 (354)
T 3jva_A 287 ECMIGCMA 294 (354)
T ss_dssp EEEECCCT
T ss_pred eEEecCCC
Confidence 99875544
No 308
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=53.45 E-value=24 Score=25.27 Aligned_cols=105 Identities=16% Similarity=0.130 Sum_probs=53.5
Q ss_pred HHhHhC-CCceEEecc----hHHHHHHHHHhcCCCCEEEEcCCCC-----------CChHHHHHhhcCCCCeEEEeecCC
Q 024619 64 LAKLDK-ADRALCFTS----GMAALAAVTHLLGTGEEIVAGDDLY-----------GGTDRLLSRVTPKTGVVVKRVNTC 127 (265)
Q Consensus 64 l~~~~g-~~~~i~~~~----g~~al~~~~~~~~~g~~viv~~~~~-----------~~~~~~~~~~~~~~g~~~~~~~~~ 127 (265)
+.+++. ...+.++.. |..+...+..+.+.|-+|..-+|.. ++.. ++.....+-++.+|..
T Consensus 6 l~~ll~~p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~G~~~~~sl~----el~~~~Dlvii~vp~~ 81 (145)
T 2duw_A 6 IAGILTSTRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYATLA----DVPEKVDMVDVFRNSE 81 (145)
T ss_dssp HHHHHHHCCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEETTEECCSSTT----TCSSCCSEEECCSCST
T ss_pred HHHHHhCCCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccCCeeccCCHH----HcCCCCCEEEEEeCHH
Confidence 445554 556666665 3333233333443344455555544 2221 2222223333344422
Q ss_pred CHHH-HHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcC
Q 024619 128 DLDE-VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (265)
Q Consensus 128 d~~~-l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~ 179 (265)
...+ +++.+...++.|++.. |.. -+++.++|+++|+.++-+.+.+
T Consensus 82 ~v~~v~~~~~~~g~~~i~i~~-----~~~--~~~l~~~a~~~Gi~~igpnc~g 127 (145)
T 2duw_A 82 AAWGVAQEAIAIGAKTLWLQL-----GVI--NEQAAVLAREAGLSVVMDRCPA 127 (145)
T ss_dssp HHHHHHHHHHHHTCCEEECCT-----TCC--CHHHHHHHHTTTCEEECSCCHH
T ss_pred HHHHHHHHHHHcCCCEEEEcC-----ChH--HHHHHHHHHHcCCEEEcCCeee
Confidence 2222 3333334566666532 333 5899999999999998777643
No 309
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=53.37 E-value=51 Score=26.73 Aligned_cols=95 Identities=20% Similarity=0.258 Sum_probs=53.2
Q ss_pred eEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC-CceEEEEecCC
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPT 149 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~~~ 149 (265)
.+++++|+..+ .++..+.+.|..|++..-.-.... .......+++++..|+.|.+.+.+++.. ++.+|+-+...
T Consensus 22 ~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~ 98 (330)
T 2pzm_A 22 RILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKR---EVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAA 98 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCG---GGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccch---hhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCcc
Confidence 56666665554 467778888887765332111111 0011224678888888898888887752 45666554332
Q ss_pred CCccc---------cccHHHHHHHHHHcCC
Q 024619 150 NPRQQ---------ICDIRKIAEMAHAHGA 170 (265)
Q Consensus 150 np~G~---------~~~l~~i~~~a~~~~~ 170 (265)
...+. +.-...+++.|++.++
T Consensus 99 ~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~ 128 (330)
T 2pzm_A 99 YKDPDDWAEDAATNVQGSINVAKAASKAGV 128 (330)
T ss_dssp CSCTTCHHHHHHHHTHHHHHHHHHHHHHTC
T ss_pred CCCccccChhHHHHHHHHHHHHHHHHHcCC
Confidence 21111 1113567788887764
No 310
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=52.86 E-value=50 Score=25.64 Aligned_cols=79 Identities=11% Similarity=0.128 Sum_probs=44.9
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC------CCceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~------~~~~~i 143 (265)
..+++++|+..+ .+...+.+.|..|++.+-.-.......... ...+....+|+.|.+++++.+. .+..++
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 84 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI--GKKARAIAADISDPGSVKALFAEIQALTGGIDIL 84 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--CTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 467777777666 467778888988887554322222111111 2235566667778887777654 245655
Q ss_pred EEecCCCCc
Q 024619 144 WVESPTNPR 152 (265)
Q Consensus 144 ~~~~~~np~ 152 (265)
+-+.-..+.
T Consensus 85 v~nAg~~~~ 93 (247)
T 3rwb_A 85 VNNASIVPF 93 (247)
T ss_dssp EECCCCCCC
T ss_pred EECCCCCCC
Confidence 544433333
No 311
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=52.79 E-value=26 Score=28.29 Aligned_cols=93 Identities=15% Similarity=0.111 Sum_probs=54.1
Q ss_pred EEecchH--HHHHHHHHhcCCCCEEE-EcCCC-C---CChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEe
Q 024619 74 LCFTSGM--AALAAVTHLLGTGEEIV-AGDDL-Y---GGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (265)
Q Consensus 74 i~~~~g~--~al~~~~~~~~~g~~vi-v~~~~-~---~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~ 146 (265)
+++++++ .+-.++..+++.|..|. +.... - +.....+.. ....+++++..|+.|.+.+.+++.. ...|+.+
T Consensus 7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~-~~~~~v~~v~~D~~d~~~l~~a~~~-~d~vi~~ 84 (321)
T 3c1o_A 7 IIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREE-FRSMGVTIIEGEMEEHEKMVSVLKQ-VDIVISA 84 (321)
T ss_dssp EEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHH-HHHTTCEEEECCTTCHHHHHHHHTT-CSEEEEC
T ss_pred EEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHH-hhcCCcEEEEecCCCHHHHHHHHcC-CCEEEEC
Confidence 4555544 44456666776776655 34432 1 111111111 1235788999999999999998864 5555543
Q ss_pred cCCCCccccccHHHHHHHHHHcC-CE
Q 024619 147 SPTNPRQQICDIRKIAEMAHAHG-AL 171 (265)
Q Consensus 147 ~~~np~G~~~~l~~i~~~a~~~~-~~ 171 (265)
.... .+...+.+++.|++.+ +-
T Consensus 85 a~~~---~~~~~~~l~~aa~~~g~v~ 107 (321)
T 3c1o_A 85 LPFP---MISSQIHIINAIKAAGNIK 107 (321)
T ss_dssp CCGG---GSGGGHHHHHHHHHHCCCC
T ss_pred CCcc---chhhHHHHHHHHHHhCCcc
Confidence 3211 1344578999999988 63
No 312
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=52.78 E-value=96 Score=25.54 Aligned_cols=98 Identities=13% Similarity=0.106 Sum_probs=54.4
Q ss_pred ceEEecchH-HHHHHHHHhcCCCC--EEEEc--CCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEe
Q 024619 72 RALCFTSGM-AALAAVTHLLGTGE--EIVAG--DDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (265)
Q Consensus 72 ~~i~~~~g~-~al~~~~~~~~~g~--~viv~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~ 146 (265)
+.+++.+.+ .++..+....+.|. +|++. .|.+.+.. . ...+...|+++..+.-.-...+.+ ++..|++-
T Consensus 123 ~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~-l-a~~L~~~gI~vtli~Dsa~~~~m~----~vd~VivG 196 (315)
T 3ecs_A 123 ATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKK-M-AKALCHLNVPVTVVLDAAVGYIME----KADLVIVG 196 (315)
T ss_dssp EEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHHH-H-HHHHHTTTCCEEEECGGGHHHHGG----GCSEEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHHH-H-HHHHHHcCCCEEEEehhHHHHHHH----hCCEEEEC
Confidence 455554444 55566666655553 45553 44443332 2 234456788888776333333333 45566553
Q ss_pred cC-CCCcccccc---HHHHHHHHHHcCCEEEEe
Q 024619 147 SP-TNPRQQICD---IRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 147 ~~-~np~G~~~~---l~~i~~~a~~~~~~li~D 175 (265)
.- -...|.+.. --.++-+|+.+|+++++=
T Consensus 197 Ad~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~ 229 (315)
T 3ecs_A 197 AEGVVENGGIINKIGTNQMAVCAKAQNKPFYVV 229 (315)
T ss_dssp CSEECTTSCEEEETTHHHHHHHHHHTTCCEEEE
T ss_pred ceEEecCCCeeehhhhHHHHHHHHHhCCCEEEE
Confidence 21 133455532 356788899999987764
No 313
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=52.33 E-value=69 Score=25.23 Aligned_cols=74 Identities=8% Similarity=0.114 Sum_probs=45.2
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC------CCceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~------~~~~~i 143 (265)
..+++|+|+..+ .++..+.+.|..|++..-.-....... .. ....+..+.+|+.|.+.+.+.+. .+..++
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l 83 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV-AA-YPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL 83 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-HH-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hh-ccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 467888887666 466778888988876544333332221 11 12356777888888888777654 245555
Q ss_pred EEec
Q 024619 144 WVES 147 (265)
Q Consensus 144 ~~~~ 147 (265)
+-+.
T Consensus 84 v~~A 87 (281)
T 3m1a_A 84 VNNA 87 (281)
T ss_dssp EECC
T ss_pred EECC
Confidence 5443
No 314
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=51.98 E-value=31 Score=25.40 Aligned_cols=88 Identities=16% Similarity=0.045 Sum_probs=52.5
Q ss_pred ceEEecchHHHHHHHHHhcCC-CCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhh-cCCCceEEEEecCC
Q 024619 72 RALCFTSGMAALAAVTHLLGT-GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASA-IGPWTKLVWVESPT 149 (265)
Q Consensus 72 ~~i~~~~g~~al~~~~~~~~~-g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~-~~~~~~~i~~~~~~ 149 (265)
.++++..|..+..++..+.+. |..|++.+..- ... ..++..|.++...+..+.+.+.++ --.+..+|+++.++
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~----~~~-~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIRE----EAA-QQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH----HHH-HHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECCH----HHH-HHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 578888887777666666665 65565544331 111 222345777777777788877765 12457777776553
Q ss_pred CCccccccHHHHHHHHHHcC
Q 024619 150 NPRQQICDIRKIAEMAHAHG 169 (265)
Q Consensus 150 np~G~~~~l~~i~~~a~~~~ 169 (265)
......++..+++.+
T Consensus 116 -----~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 116 -----HQGNQTALEQLQRRN 130 (183)
T ss_dssp -----HHHHHHHHHHHHHTT
T ss_pred -----hHHHHHHHHHHHHHC
Confidence 122345666777764
No 315
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=51.87 E-value=41 Score=26.10 Aligned_cols=73 Identities=10% Similarity=0.070 Sum_probs=43.8
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC------CCceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~------~~~~~i 143 (265)
..+++|+|+..+ .+...+.+.|..|++.+-.-.... ....+..+......|+.|.+++++.+. .+..++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 79 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSA---DFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVL 79 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHhcccCCeEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 356777777666 467778888988876543221111 112223356677788888888777664 255655
Q ss_pred EEec
Q 024619 144 WVES 147 (265)
Q Consensus 144 ~~~~ 147 (265)
+-+.
T Consensus 80 v~nA 83 (247)
T 3dii_A 80 VNNA 83 (247)
T ss_dssp EECC
T ss_pred EECC
Confidence 5444
No 316
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=51.44 E-value=9.6 Score=25.37 Aligned_cols=21 Identities=14% Similarity=0.146 Sum_probs=18.5
Q ss_pred HHHHHHHHHHcCCEEEEeCCc
Q 024619 158 IRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 158 l~~i~~~a~~~~~~li~D~~~ 178 (265)
-++|.++|+++|++++.|-.-
T Consensus 29 A~~I~e~A~e~gVPi~e~~~L 49 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVKL 49 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHcCCCEEECHHH
Confidence 388999999999999999653
No 317
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=51.35 E-value=39 Score=25.75 Aligned_cols=74 Identities=12% Similarity=0.154 Sum_probs=51.5
Q ss_pred CCCChHHHHHhhcCCCCeEEEeecCC-CHHHHHhhcC-CCceEEEEecCCCCccccccHHHHHHHHHHcC----CEEEEe
Q 024619 102 LYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHG----ALLLVD 175 (265)
Q Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~~~-~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~----~~li~D 175 (265)
.|.--...+...++..|.+++.+..+ ..+++.+++. .++.+|.++.... .....++++++..++.+ +.+++=
T Consensus 100 ~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~~~--~~~~~~~~~i~~l~~~~~~~~~~v~vG 177 (210)
T 1y80_A 100 LHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALLT--TTMMNMKSTIDALIAAGLRDRVKVIVG 177 (210)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECCSG--GGTHHHHHHHHHHHHTTCGGGCEEEEE
T ss_pred ccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEE
Confidence 34333445567778899999988754 5777776664 5788888876533 34567889998888865 667665
Q ss_pred CC
Q 024619 176 NS 177 (265)
Q Consensus 176 ~~ 177 (265)
+.
T Consensus 178 G~ 179 (210)
T 1y80_A 178 GA 179 (210)
T ss_dssp ST
T ss_pred CC
Confidence 54
No 318
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=51.25 E-value=65 Score=27.72 Aligned_cols=115 Identities=13% Similarity=-0.004 Sum_probs=68.5
Q ss_pred HHHHHHHhHhCCCceEEec--ch---HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCC-eEEEeec-CCCHHH
Q 024619 59 ALESLLAKLDKADRALCFT--SG---MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG-VVVKRVN-TCDLDE 131 (265)
Q Consensus 59 ~l~~~l~~~~g~~~~i~~~--~g---~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g-~~~~~~~-~~d~~~ 131 (265)
+.-+.+.+.+|.+-.+.+. +| .+++..+..+ ++-+...+++|.-+.....+..+.+..+ +.+.... ..++++
T Consensus 217 e~v~avR~avG~d~~l~vDan~~~~~~eai~~~~~L-~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~ 295 (428)
T 3bjs_A 217 ERVRHVRKVLGDEVDILTDANTAYTMADARRVLPVL-AEIQAGWLEEPFACNDFASYREVAKITPLVPIAAGENHYTRFE 295 (428)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHH-HHTTCSCEECCSCTTCHHHHHHHTTTCSSSCEEECTTCCSHHH
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHH-HhcCCCEEECCCCccCHHHHHHHHHhCCCCcEEcCCCcCCHHH
Confidence 3445566667766444443 23 2444444443 2223336777765544555556655555 5554433 347888
Q ss_pred HHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEe
Q 024619 132 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 132 l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D 175 (265)
+++.+..+..=++..-+ +..|.+....+++++|+++|+.++.=
T Consensus 296 ~~~~i~~~~~d~v~ik~-~~~GGitea~~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 296 FGQMLDAGAVQVWQPDL-SKCGGITEGIRIAAMASAYRIPINAH 338 (428)
T ss_dssp HHHHHTTCCEEEECCBT-TTSSCHHHHHHHHHHHHHTTCCBCCB
T ss_pred HHHHHHhCCCCEEEeCc-cccCCHHHHHHHHHHHHHcCCeEEec
Confidence 88888755433333334 55788889999999999999876554
No 319
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=51.15 E-value=80 Score=24.12 Aligned_cols=123 Identities=15% Similarity=0.194 Sum_probs=66.6
Q ss_pred ChhHHHHHHHHHhHhCCC---ceEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeE--EEeecCC
Q 024619 54 NPTRDALESLLAKLDKAD---RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV--VKRVNTC 127 (265)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~---~~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~ 127 (265)
.+...++-..+.+..+.. .++=+.+|+.... .+...+.++.+|+..+..- ......+..++..|.. -+.+-..
T Consensus 38 ~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~-~~~~~a~~~~~~~g~~~~~i~~~~g 116 (221)
T 3dr5_A 38 DEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPES-EHQRQAKALFREAGYSPSRVRFLLS 116 (221)
T ss_dssp CHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCH-HHHHHHHHHHHHTTCCGGGEEEECS
T ss_pred CHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCH-HHHHHHHHHHHHcCCCcCcEEEEEc
Confidence 356667777777777766 6887888876554 3333455566676555432 2222333333444433 1222234
Q ss_pred CHHHHHhhc-CCCceEEEEecCCCCccccccHHHHHHHHHH---cCCEEEEeCCcCCCCC
Q 024619 128 DLDEVASAI-GPWTKLVWVESPTNPRQQICDIRKIAEMAHA---HGALLLVDNSIMSPVL 183 (265)
Q Consensus 128 d~~~l~~~~-~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~---~~~~li~D~~~~~~~~ 183 (265)
|..++...+ .....+|++.... .+..++.+.+.+ -|.++++|++...|..
T Consensus 117 da~~~l~~~~~~~fD~V~~d~~~------~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v 170 (221)
T 3dr5_A 117 RPLDVMSRLANDSYQLVFGQVSP------MDLKALVDAAWPLLRRGGALVLADALLDGTI 170 (221)
T ss_dssp CHHHHGGGSCTTCEEEEEECCCT------TTHHHHHHHHHHHEEEEEEEEETTTTGGGTC
T ss_pred CHHHHHHHhcCCCcCeEEEcCcH------HHHHHHHHHHHHHcCCCcEEEEeCCCCCCcC
Confidence 555555444 4557777765431 122333333333 2778888888765544
No 320
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=50.47 E-value=9.8 Score=33.04 Aligned_cols=30 Identities=17% Similarity=0.185 Sum_probs=25.8
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 149 TNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 149 ~np~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
+..-|...+++++++.|+++|+-||.|-++
T Consensus 58 dp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 87 (448)
T 1g94_A 58 QSRGGNRAQFIDMVNRCSAAGVDIYVDTLI 87 (448)
T ss_dssp CBTTBCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 334577789999999999999999999875
No 321
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=50.33 E-value=63 Score=22.81 Aligned_cols=91 Identities=12% Similarity=0.045 Sum_probs=53.1
Q ss_pred ceEEecchHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCC
Q 024619 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (265)
Q Consensus 72 ~~i~~~~g~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np 151 (265)
.++++..|.-+..++..+.+.|..|.+-+..-......+... ...|.+++.-+..+.+.++++--++..+|++..++.
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~-~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d- 82 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR-LGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND- 82 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH-HCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH-
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHh-hcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh-
Confidence 577888787666666666666765554443211111111111 235788888888888888876335677777665431
Q ss_pred ccccccHHHHHHHHHHc
Q 024619 152 RQQICDIRKIAEMAHAH 168 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~ 168 (265)
..-..++..+++.
T Consensus 83 ----~~n~~~~~~a~~~ 95 (153)
T 1id1_A 83 ----ADNAFVVLSAKDM 95 (153)
T ss_dssp ----HHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHH
Confidence 1224566677775
No 322
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=50.22 E-value=81 Score=26.62 Aligned_cols=82 Identities=12% Similarity=0.120 Sum_probs=45.0
Q ss_pred CEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHHHhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCE
Q 024619 94 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGAL 171 (265)
Q Consensus 94 ~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~ 171 (265)
+...+++|..+.....+..+.+..++.+..-. ..+..++++.+..+ ..+|.+. + ...|.+.+..+++++|+++|+.
T Consensus 215 ~l~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k-~-~~~GGi~~~~~ia~~A~~~gi~ 292 (379)
T 3r0u_A 215 NVEIIEQPVKYYDIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNMINIK-L-AKTGGILEAQKIKKLADSAGIS 292 (379)
T ss_dssp CEEEEECCSCTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEEC-H-HHHTSHHHHHHHHHHHHHTTCE
T ss_pred CcEEEECCCCcccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEEC-c-cccCCHHHHHHHHHHHHHcCCE
Confidence 34455666544333333333333333322221 23566666665433 3333332 2 2367778889999999999999
Q ss_pred EEEeCC
Q 024619 172 LLVDNS 177 (265)
Q Consensus 172 li~D~~ 177 (265)
+..-..
T Consensus 293 ~~~~~~ 298 (379)
T 3r0u_A 293 CMVGCM 298 (379)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 887644
No 323
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=50.06 E-value=38 Score=28.40 Aligned_cols=46 Identities=20% Similarity=0.284 Sum_probs=31.7
Q ss_pred CHHHHHhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEe
Q 024619 128 DLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 128 d~~~l~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D 175 (265)
+++++++.+..+ ..+|.+- + +..|.+....+++++|+++|+.+++=
T Consensus 244 ~~~~~~~~i~~~~~d~v~ik-~-~~~GGit~~~~i~~~A~~~g~~~~~~ 290 (368)
T 1sjd_A 244 SARAAADAIKLGAVQIVNIK-P-GRVGGYLEARRVHDVCAAHGIPVWCG 290 (368)
T ss_dssp SHHHHHHHHHTTCCSEEEEC-T-TTTTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CHHHHHHHHHcCCCCEEEec-c-cccCCHHHHHHHHHHHHHcCCcEEeC
Confidence 566666666433 4444442 3 55788888999999999999985443
No 324
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=50.00 E-value=52 Score=27.65 Aligned_cols=113 Identities=11% Similarity=0.073 Sum_probs=60.6
Q ss_pred HHHHhHhCCCceEEec--ch---HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHHHhh
Q 024619 62 SLLAKLDKADRALCFT--SG---MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASA 135 (265)
Q Consensus 62 ~~l~~~~g~~~~i~~~--~g---~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l~~~ 135 (265)
+.+.+.+|.+-.+.+- +| .+|+..+..+ ++-+...+++|..+.....+..+.+..++.+..-. ..+.+++++.
T Consensus 175 ~avR~~~g~~~~l~vDaN~~~~~~~A~~~~~~l-~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~ 253 (368)
T 3q45_A 175 RMIREAAGDSITLRIDANQGWSVETAIETLTLL-EPYNIQHCEEPVSRNLYTALPKIRQACRIPIMADESCCNSFDAERL 253 (368)
T ss_dssp HHHHHHHCSSSEEEEECTTCBCHHHHHHHHHHH-GGGCCSCEECCBCGGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHH
T ss_pred HHHHHHhCCCCeEEEECCCCCChHHHHHHHHHH-hhcCCCEEECCCChhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHH
Confidence 4455556655333332 22 1333333333 22233355666543322222333344444433222 3467777777
Q ss_pred cCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 024619 136 IGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (265)
Q Consensus 136 ~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~ 177 (265)
+..+ ..+|.+. + +..|.+....+++++|+++|+.+..-..
T Consensus 254 ~~~~~~d~v~~k-~-~~~GGit~~~~i~~~A~~~gi~~~~~~~ 294 (368)
T 3q45_A 254 IQIQACDSFNLK-L-SKSAGITNALNIIRLAEQAHMPVQVGGF 294 (368)
T ss_dssp HHTTCCSEEEEC-T-TTTTSHHHHHHHHHHHHHTTCCEEECCS
T ss_pred HHcCCCCeEEec-h-hhcCCHHHHHHHHHHHHHcCCcEEecCc
Confidence 7543 4554443 4 3478888999999999999998877543
No 325
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=49.86 E-value=47 Score=27.68 Aligned_cols=98 Identities=13% Similarity=0.080 Sum_probs=53.0
Q ss_pred eEEecchHHHH--HHHHHhc-CCCCEEEEcCCCCCCh--------HHHH----HhhcC---CCC---eEEEeecCCCHHH
Q 024619 73 ALCFTSGMAAL--AAVTHLL-GTGEEIVAGDDLYGGT--------DRLL----SRVTP---KTG---VVVKRVNTCDLDE 131 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~-~~g~~viv~~~~~~~~--------~~~~----~~~~~---~~g---~~~~~~~~~d~~~ 131 (265)
.+++++|+..+ .++..++ +.|..|++..-.-... ...+ ..... ..+ ++++..|+.|.+.
T Consensus 4 ~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 83 (397)
T 1gy8_A 4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDF 83 (397)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHH
Confidence 35666655444 4667777 7888777543211111 1111 11111 113 7788888889998
Q ss_pred HHhhcC--CCceEEEEecCCCCccc-c-----------ccHHHHHHHHHHcCC
Q 024619 132 VASAIG--PWTKLVWVESPTNPRQQ-I-----------CDIRKIAEMAHAHGA 170 (265)
Q Consensus 132 l~~~~~--~~~~~i~~~~~~np~G~-~-----------~~l~~i~~~a~~~~~ 170 (265)
+.+++. .++.+|+-+......+. . .-...+++.|++.++
T Consensus 84 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~ 136 (397)
T 1gy8_A 84 LNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKC 136 (397)
T ss_dssp HHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCC
Confidence 888775 33666665443222111 1 113567788888775
No 326
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=49.68 E-value=30 Score=26.87 Aligned_cols=71 Identities=17% Similarity=0.113 Sum_probs=42.9
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC------CceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP------WTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~------~~~~i 143 (265)
..+++++|+..+ .+...+.+.|..|++..-.- .......+..|+....+|+.|.+++++.+.. +..++
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 81 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEE----GPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGV 81 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 356777777666 46677788898887643221 1112222333577778888888887776542 45555
Q ss_pred EEe
Q 024619 144 WVE 146 (265)
Q Consensus 144 ~~~ 146 (265)
+-+
T Consensus 82 vn~ 84 (245)
T 1uls_A 82 VHY 84 (245)
T ss_dssp EEC
T ss_pred EEC
Confidence 543
No 327
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=49.50 E-value=56 Score=25.92 Aligned_cols=76 Identities=7% Similarity=0.091 Sum_probs=44.3
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcC-CCCeEEEeecCCCHHHHHhhcC------CCceE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTGVVVKRVNTCDLDEVASAIG------PWTKL 142 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~d~~~l~~~~~------~~~~~ 142 (265)
..+++++|+..+ .+...+.+.|..|++..-.-............ ...+..+.+|+.|.+++++.+. .+..+
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~ 112 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDI 112 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 477777777666 46677888898887654332222222111111 1245666778888888777664 24565
Q ss_pred EEEec
Q 024619 143 VWVES 147 (265)
Q Consensus 143 i~~~~ 147 (265)
++-+.
T Consensus 113 lvnnA 117 (276)
T 3r1i_A 113 AVCNA 117 (276)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 55443
No 328
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=49.49 E-value=26 Score=28.09 Aligned_cols=93 Identities=15% Similarity=0.109 Sum_probs=53.2
Q ss_pred EEecchH--HHHHHHHHhcCCCCEEE-EcCCC-CC----ChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEE
Q 024619 74 LCFTSGM--AALAAVTHLLGTGEEIV-AGDDL-YG----GTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWV 145 (265)
Q Consensus 74 i~~~~g~--~al~~~~~~~~~g~~vi-v~~~~-~~----~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~ 145 (265)
+++++|+ -+-.++..+++.|..|. +.... .. .....+ ......|++++..|+.|.+.+.+++.. ...|+-
T Consensus 5 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~~~v~~v~~D~~d~~~l~~~~~~-~d~vi~ 82 (307)
T 2gas_A 5 ILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQSLGVILLEGDINDHETLVKAIKQ-VDIVIC 82 (307)
T ss_dssp EEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHHTTCEEEECCTTCHHHHHHHHTT-CSEEEE
T ss_pred EEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHhCCCEEEEeCCCCHHHHHHHHhC-CCEEEE
Confidence 4455544 34456666666676554 34332 11 111111 111235788999999999999988863 555554
Q ss_pred ecCCCCccccccHHHHHHHHHHcC-CE
Q 024619 146 ESPTNPRQQICDIRKIAEMAHAHG-AL 171 (265)
Q Consensus 146 ~~~~np~G~~~~l~~i~~~a~~~~-~~ 171 (265)
+.... .+.....+++.|++.| +.
T Consensus 83 ~a~~~---~~~~~~~l~~aa~~~g~v~ 106 (307)
T 2gas_A 83 AAGRL---LIEDQVKIIKAIKEAGNVK 106 (307)
T ss_dssp CSSSS---CGGGHHHHHHHHHHHCCCS
T ss_pred CCccc---ccccHHHHHHHHHhcCCce
Confidence 33221 1344578899999887 53
No 329
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=49.30 E-value=48 Score=26.00 Aligned_cols=76 Identities=13% Similarity=0.199 Sum_probs=43.9
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCC--CCeEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++|+|+..+ .+...+.+.|..|++..-.-...........+. ..+..+.+|+.|.+++++.+. .+..
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 90 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGID 90 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 467788877666 466778888988876543322222112122121 245666778888887776654 2455
Q ss_pred EEEEec
Q 024619 142 LVWVES 147 (265)
Q Consensus 142 ~i~~~~ 147 (265)
+++-+.
T Consensus 91 ~lvnnA 96 (262)
T 3pk0_A 91 VVCANA 96 (262)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 330
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=49.17 E-value=82 Score=25.40 Aligned_cols=96 Identities=16% Similarity=0.180 Sum_probs=51.4
Q ss_pred EEecchHHHH--HHHHHhcCC---C---CEEEE-cCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEE
Q 024619 74 LCFTSGMAAL--AAVTHLLGT---G---EEIVA-GDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVW 144 (265)
Q Consensus 74 i~~~~g~~al--~~~~~~~~~---g---~~viv-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~ 144 (265)
+++++|+..+ .++..+++. | .+|++ ...........+.......+++++..|+.|.+.+.+++ .++.+|+
T Consensus 3 vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~Vi 81 (337)
T 1r6d_A 3 LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-RGVDAIV 81 (337)
T ss_dssp EEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-TTCCEEE
T ss_pred EEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHh-cCCCEEE
Confidence 4556555444 456666654 6 66664 33221111111111212346788888888999998887 4566665
Q ss_pred EecCCCCccc------------cccHHHHHHHHHHcCC
Q 024619 145 VESPTNPRQQ------------ICDIRKIAEMAHAHGA 170 (265)
Q Consensus 145 ~~~~~np~G~------------~~~l~~i~~~a~~~~~ 170 (265)
-+........ +.-...+++.|+++++
T Consensus 82 h~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~ 119 (337)
T 1r6d_A 82 HFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGV 119 (337)
T ss_dssp ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4433221110 0113578888988875
No 331
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=49.13 E-value=9.2 Score=25.69 Aligned_cols=21 Identities=14% Similarity=0.275 Sum_probs=18.4
Q ss_pred HHHHHHHHHHcCCEEEEeCCc
Q 024619 158 IRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 158 l~~i~~~a~~~~~~li~D~~~ 178 (265)
-++|.++|+++|++++.|...
T Consensus 44 A~~I~~~A~e~gVPi~e~~~L 64 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVPL 64 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHcCCeEEECHHH
Confidence 378999999999999999653
No 332
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=49.10 E-value=51 Score=26.72 Aligned_cols=92 Identities=10% Similarity=0.017 Sum_probs=50.7
Q ss_pred eEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCC
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~n 150 (265)
.+++++|+..+ .++..+.+.|..|++..-.-.... . ....+++++..|+.|.+.+.+++. ++..|+-+....
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~-l~~~~~~~~~~Dl~d~~~~~~~~~-~~d~vih~a~~~ 88 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQ----R-LAYLEPECRVAEMLDHAGLERALR-GLDGVIFSAGYY 88 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGG----G-GGGGCCEEEECCTTCHHHHHHHTT-TCSEEEEC----
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhh----h-hccCCeEEEEecCCCHHHHHHHHc-CCCEEEECCccC
Confidence 46666655444 466777777877765322111111 1 122367888889999999998886 355555433221
Q ss_pred Cc--ccc--------ccHHHHHHHHHHcCC
Q 024619 151 PR--QQI--------CDIRKIAEMAHAHGA 170 (265)
Q Consensus 151 p~--G~~--------~~l~~i~~~a~~~~~ 170 (265)
.. ... .-...+++.|+++++
T Consensus 89 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 118 (342)
T 2x4g_A 89 PSRPRRWQEEVASALGQTNPFYAACLQARV 118 (342)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 11 011 113578888888764
No 333
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=48.86 E-value=25 Score=27.81 Aligned_cols=66 Identities=11% Similarity=0.114 Sum_probs=38.1
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCC--CCeEEEeecCCCHHHHHhhcC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~~~ 137 (265)
..+++|+|+..+ .+...+.+.|..|++..-.-..........++. ..+....+|+.|.+++++.+.
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 477888887776 466778888988876322111111111122222 235566667778888777664
No 334
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=48.77 E-value=61 Score=25.21 Aligned_cols=90 Identities=13% Similarity=0.144 Sum_probs=53.1
Q ss_pred ceEEecchHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCC
Q 024619 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (265)
Q Consensus 72 ~~i~~~~g~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np 151 (265)
.++++.+|..|...+..+++.|-.|.+.+|...... ..+++..+++++.-+. +.+++ .+..+|+.+ +.++
T Consensus 33 ~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l---~~l~~~~~i~~i~~~~-~~~dL-----~~adLVIaA-T~d~ 102 (223)
T 3dfz_A 33 SVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEI---NEWEAKGQLRVKRKKV-GEEDL-----LNVFFIVVA-TNDQ 102 (223)
T ss_dssp CEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHH---HHHHHTTSCEEECSCC-CGGGS-----SSCSEEEEC-CCCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHH---HHHHHcCCcEEEECCC-CHhHh-----CCCCEEEEC-CCCH
Confidence 689999998888888888888877877777654433 2444445566543222 22222 234555533 3333
Q ss_pred ccccccHHHHHHHHHHcCCEE-EEeC
Q 024619 152 RQQICDIRKIAEMAHAHGALL-LVDN 176 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~~~~l-i~D~ 176 (265)
.--+.+.+.|+ .++++ ++|+
T Consensus 103 ----~~N~~I~~~ak-~gi~VNvvD~ 123 (223)
T 3dfz_A 103 ----AVNKFVKQHIK-NDQLVNMASS 123 (223)
T ss_dssp ----HHHHHHHHHSC-TTCEEEC---
T ss_pred ----HHHHHHHHHHh-CCCEEEEeCC
Confidence 23467777887 78875 4554
No 335
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=48.70 E-value=65 Score=25.67 Aligned_cols=20 Identities=15% Similarity=-0.022 Sum_probs=10.8
Q ss_pred HHHHHHHHhHhCCCceEEec
Q 024619 58 DALESLLAKLDKADRALCFT 77 (265)
Q Consensus 58 ~~l~~~l~~~~g~~~~i~~~ 77 (265)
.++++.|++.||.++++++.
T Consensus 14 ~~Le~~L~~~fgL~~v~Vvp 33 (266)
T 3efb_A 14 LWLEQQLKQKFGLKDVVVVS 33 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHhCCCEEEEEc
Confidence 35555555555555555444
No 336
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=48.59 E-value=30 Score=26.33 Aligned_cols=67 Identities=9% Similarity=0.053 Sum_probs=45.4
Q ss_pred CCCHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEE--EEeCCcCCCCCc-----CCCCCCccEEEec
Q 024619 126 TCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALL--LVDNSIMSPVLS-----RPLELGADIVMHS 197 (265)
Q Consensus 126 ~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~l--i~D~~~~~~~~~-----~~~~~~~di~~~s 197 (265)
+.+.+++++++..+...+++- +|.+..++++++.++++|-.+ ..|-..+.+.-. .....++|.++++
T Consensus 16 vr~~~~l~~al~s~~~~ifll-----~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIsT 89 (192)
T 3kts_A 16 AHNQKDMEKILELDLTYMVML-----ETHVAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIIST 89 (192)
T ss_dssp ESSSHHHHHHTTSSCCEEEEC-----SEETTTHHHHHHHHHHTTCEEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEES
T ss_pred ecCHHHHHHHHcCCCCEEEEe-----cCcHHHHHHHHHHHHHcCCeEEEecCchhccCCcHHHHHHHHhCCCCCEEEeC
Confidence 347889999888777777653 467789999999999998654 445554433321 1123467777775
No 337
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=48.53 E-value=30 Score=28.85 Aligned_cols=74 Identities=11% Similarity=0.199 Sum_probs=47.1
Q ss_pred CCCCCChHHHHHhhcCCCCeEEEeecCCCH-HHHHhhcC-CCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 024619 100 DDLYGGTDRLLSRVTPKTGVVVKRVNTCDL-DEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (265)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~-~~l~~~~~-~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~ 177 (265)
-|.|.+..+.... .-...+-++.+|.... +.+.+++. ..++.+++-...-|. .+.+++.++|+++|+.|+==.+
T Consensus 64 vpvy~sv~ea~~~-~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G~~e---~~~~~l~~~a~~~g~rliGPNc 139 (334)
T 3mwd_B 64 IPVFKNMADAMRK-HPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPE---ALTRKLIKKADQKGVTIIGPAT 139 (334)
T ss_dssp EEEESSHHHHHHH-CTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCH---HHHHHHHHHHHHHTCEEECSSC
T ss_pred ceeeCCHHHHhhc-CCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECCCCCH---HHHHHHHHHHHHcCCEEEccCC
Confidence 3677777543221 1124567777777664 67777777 678766653332222 4678999999999988774444
No 338
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=48.45 E-value=30 Score=26.99 Aligned_cols=92 Identities=9% Similarity=0.103 Sum_probs=53.0
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccHHHH
Q 024619 82 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKI 161 (265)
Q Consensus 82 al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i 161 (265)
.+..+......|..+++..|.-.... .-...+...|.+..-.+..+.+++.+.+..+..+|++.-.+..+-. -++.+
T Consensus 45 Llr~~~r~~~~g~kvli~kp~~D~R~-~~~~I~Sr~G~~~~a~~v~~~~di~~~i~~~~dvV~IDEaQFf~~~--~v~~l 121 (219)
T 3e2i_A 45 LIRRLRRGIYAKQKVVVFKPAIDDRY-HKEKVVSHNGNAIEAINISKASEIMTHDLTNVDVIGIDEVQFFDDE--IVSIV 121 (219)
T ss_dssp HHHHHHHHHHTTCCEEEEEEC------------CBTTBCCEEEEESSGGGGGGSCCTTCSEEEECCGGGSCTH--HHHHH
T ss_pred HHHHHHHHHHcCCceEEEEeccCCcc-hhhhHHHhcCCceeeEEeCCHHHHHHHHhcCCCEEEEechhcCCHH--HHHHH
Confidence 44455555555777777666543221 1124455667766666666777777767677888888777665421 13455
Q ss_pred HHHHHHcCCEEEEeCC
Q 024619 162 AEMAHAHGALLLVDNS 177 (265)
Q Consensus 162 ~~~a~~~~~~li~D~~ 177 (265)
.+++ ..|+.|++-+-
T Consensus 122 ~~la-~~gi~Vi~~GL 136 (219)
T 3e2i_A 122 EKLS-ADGHRVIVAGL 136 (219)
T ss_dssp HHHH-HTTCEEEEEEE
T ss_pred HHHH-HCCCEEEEeec
Confidence 5566 57999988643
No 339
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=48.38 E-value=36 Score=29.25 Aligned_cols=112 Identities=9% Similarity=-0.024 Sum_probs=68.7
Q ss_pred HHHHhHhCCCceEEecc-h----HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHHHhh
Q 024619 62 SLLAKLDKADRALCFTS-G----MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASA 135 (265)
Q Consensus 62 ~~l~~~~g~~~~i~~~~-g----~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l~~~ 135 (265)
+.+.+.+|.+-.+.+.. + .+|+..+..+ ++-+...+++|..+.....+..+.+..++++..-. ..+..++++.
T Consensus 212 ~avR~a~G~~~~l~vDan~~~~~~~A~~~~~~l-~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~ 290 (421)
T 4hnl_A 212 AAIKEKYGNQFQMLHDVHERLHPNQAIQFAKAA-EPYQLFFLEDILPPDQSHWLTQLRSQSATPIATGELFNNPMEWQEL 290 (421)
T ss_dssp HHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHH-GGGCCSEEECCSCGGGGGGHHHHHTTCCCCEEECTTCCSGGGTHHH
T ss_pred HHHHHHhCCCceEeccccccCCHHHHHHHHHHh-hhhhhcccccCCcccchHHHHHHHhcCCCCeecCcceehhHHHHHH
Confidence 45556678775555443 2 1444444443 44456688998765555555555566555543322 3467777777
Q ss_pred cCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEe
Q 024619 136 IGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 136 ~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D 175 (265)
+..+..=++..-+ +..|.+.+..+|+++|+++|+.+..=
T Consensus 291 i~~~a~d~v~~d~-~~~GGite~~~ia~~A~~~gi~v~~h 329 (421)
T 4hnl_A 291 VKNRQIDFMRAHV-SQIGGITPALKLAHFCDAMGVRIAWH 329 (421)
T ss_dssp HHTTCCSEECCCG-GGGTSHHHHHHHHHHHHHTTCEECCC
T ss_pred HhcCCceEEEeCC-CCCCCHHHHHHHHHHHHHCCCeEEEe
Confidence 7544332332223 55788999999999999999988653
No 340
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=48.24 E-value=68 Score=27.10 Aligned_cols=114 Identities=8% Similarity=-0.057 Sum_probs=68.4
Q ss_pred HHHHHHHhHhCCCceEEec--ch---HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHH
Q 024619 59 ALESLLAKLDKADRALCFT--SG---MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEV 132 (265)
Q Consensus 59 ~l~~~l~~~~g~~~~i~~~--~g---~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l 132 (265)
+.-+.+.+.+|.+-.+.+. +| .+++..+..+ ++-+...+++|..+.....+..+.+..++.+..-. ..+++++
T Consensus 198 e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l-~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~ 276 (392)
T 1tzz_A 198 MRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKML-RDYPLFWYEEVGDPLDYALQAALAEFYPGPMATGENLFSHQDA 276 (392)
T ss_dssp HHHHHHHHHHTTTCEEEEECTTCCCHHHHHHHHHHH-TTSCCSEEECCSCTTCHHHHHHHTTTCCSCEEECTTCCSHHHH
T ss_pred HHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHH-HHcCCCeecCCCChhhHHHHHHHHhhCCCCEEECCCCCCHHHH
Confidence 4445556666766444333 23 2444444443 43344477888765555555566555555544433 3467788
Q ss_pred HhhcCCC-----ceEEEEecCCCCccccccHHHHHHHHHHcCCE---EEEe
Q 024619 133 ASAIGPW-----TKLVWVESPTNPRQQICDIRKIAEMAHAHGAL---LLVD 175 (265)
Q Consensus 133 ~~~~~~~-----~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~---li~D 175 (265)
++.+..+ ..+|.+- + +..|.+....+++++|+++|+. ++.=
T Consensus 277 ~~~i~~~~~~~~~d~v~ik-~-~~~GGit~~~~i~~~A~~~gi~~~~~~~~ 325 (392)
T 1tzz_A 277 RNLLRYGGMRPDRDWLQFD-C-ALSYGLCEYQRTLEVLKTHGWSPSRCIPH 325 (392)
T ss_dssp HHHHHHSCCCTTTCEECCC-T-TTTTCHHHHHHHHHHHHHTTCCGGGBCCS
T ss_pred HHHHHcCCCccCCcEEEEC-c-cccCCHHHHHHHHHHHHHCCCCCceEeec
Confidence 7777543 4444432 3 5578888999999999999987 6554
No 341
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=48.22 E-value=51 Score=25.75 Aligned_cols=66 Identities=14% Similarity=0.147 Sum_probs=37.7
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcC---CCCeEEEeecCCCHHHHHhhcC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP---KTGVVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~d~~~l~~~~~ 137 (265)
..+++++|+..+ .+...+.+.|..|++..-.-............ ..++.+..+|+.|.+++++.+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 78 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFE 78 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHH
Confidence 467777777666 46677788888877643221111111111100 1146677778888888877664
No 342
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=48.07 E-value=29 Score=26.46 Aligned_cols=72 Identities=11% Similarity=0.052 Sum_probs=42.4
Q ss_pred eEEecchHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecC
Q 024619 73 ALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (265)
Q Consensus 73 ~i~~~~g~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~ 148 (265)
++++..|.-+..++..+.+.|..|++-+... .......+..|..++.-+..+.+.++++--.+..++++..+
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~~~----~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINKDR----ELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEESCH----HHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEECCH----HHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 5667777666666666666675555444321 11123233356777777777888777764455666665544
No 343
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=48.06 E-value=25 Score=26.73 Aligned_cols=41 Identities=17% Similarity=0.220 Sum_probs=20.4
Q ss_pred CCHHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEE
Q 024619 127 CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (265)
Q Consensus 127 ~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~ 174 (265)
.+.+.+.+.+.-+.....+.++ .++++.++.+++.|+-+++
T Consensus 107 ~~~~~~~~ll~~~i~~~~~~~~-------~e~~~~i~~l~~~G~~vvV 147 (196)
T 2q5c_A 107 VDKHEIEAMLGVKIKEFLFSSE-------DEITTLISKVKTENIKIVV 147 (196)
T ss_dssp SCHHHHHHHHTCEEEEEEECSG-------GGHHHHHHHHHHTTCCEEE
T ss_pred hHHHHHHHHhCCceEEEEeCCH-------HHHHHHHHHHHHCCCeEEE
Confidence 3566666666544443332211 2445566666666654444
No 344
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=48.06 E-value=29 Score=26.95 Aligned_cols=76 Identities=12% Similarity=0.083 Sum_probs=42.6
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCC--CCeEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++|+|+..+ .+...+.+.|..|++....-...........+. .....+.+|+.|.+++++.+. .+..
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 84 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLD 84 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 367778877666 467778888988876432211111111111222 235566677778888777664 2455
Q ss_pred EEEEec
Q 024619 142 LVWVES 147 (265)
Q Consensus 142 ~i~~~~ 147 (265)
+++-+.
T Consensus 85 ~lv~nA 90 (246)
T 3osu_A 85 VLVNNA 90 (246)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 345
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=47.88 E-value=64 Score=27.25 Aligned_cols=110 Identities=14% Similarity=0.110 Sum_probs=67.7
Q ss_pred HHHHHHHhHhCCCceEEec--ch---HHHHHHHHHhcCC-CCEEEEcCCCCCChHHHHHhhcCCC-CeEEEeec-CCCHH
Q 024619 59 ALESLLAKLDKADRALCFT--SG---MAALAAVTHLLGT-GEEIVAGDDLYGGTDRLLSRVTPKT-GVVVKRVN-TCDLD 130 (265)
Q Consensus 59 ~l~~~l~~~~g~~~~i~~~--~g---~~al~~~~~~~~~-g~~viv~~~~~~~~~~~~~~~~~~~-g~~~~~~~-~~d~~ 130 (265)
+.-+.+.+.+|.+-.+.+. +| .+++..+..+-+. -+...+++|..+.....+..+.+.. ++.+..-. . +++
T Consensus 178 e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i~~iEqP~~~~~~~~~~~l~~~~~~iPIa~dE~~-~~~ 256 (389)
T 2oz8_A 178 RRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHDLLWVEDPILRHDHDGLRTLRHAVTWTQINSGEYL-DLQ 256 (389)
T ss_dssp HHHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCCCSEEESCBCTTCHHHHHHHHHHCCSSEEEECTTC-CHH
T ss_pred HHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCceEEeCCCCCcCHHHHHHHHhhCCCCCEEeCCCC-CHH
Confidence 4445556666666444433 23 2444444444331 2344678886544444444544444 55555443 4 888
Q ss_pred HHHhhcCC-CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEe
Q 024619 131 EVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 131 ~l~~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D 175 (265)
++++.+.. ...+|.+. |.+.+..+++++|+++|+.++.=
T Consensus 257 ~~~~~i~~~~~d~v~ik------GGit~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 257 GKRLLLEAHAADILNVH------GQVTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp HHHHHHHTTCCSEEEEC------SCHHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHcCCCCEEEEC------cCHHHHHHHHHHHHHcCCeEeec
Confidence 88888754 46677665 88989999999999999987765
No 346
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=47.68 E-value=10 Score=25.57 Aligned_cols=21 Identities=19% Similarity=0.264 Sum_probs=18.5
Q ss_pred HHHHHHHHHHcCCEEEEeCCc
Q 024619 158 IRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 158 l~~i~~~a~~~~~~li~D~~~ 178 (265)
-++|.++|+++|++++.|-..
T Consensus 29 A~~I~e~A~e~gVPi~e~~~L 49 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIKL 49 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHcCCCeecCHHH
Confidence 388999999999999999653
No 347
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=47.65 E-value=37 Score=26.78 Aligned_cols=77 Identities=9% Similarity=0.044 Sum_probs=44.1
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCC--CCeEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++++|+..+ .++..+.+.|..|++..-.-......+....+. ..+.+..+|+.|.+++.+.+. .+..
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 109 (271)
T 4iin_A 30 KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLS 109 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 477888877666 467778888988776433211112112122222 245666677778877776654 2556
Q ss_pred EEEEecC
Q 024619 142 LVWVESP 148 (265)
Q Consensus 142 ~i~~~~~ 148 (265)
+++-+..
T Consensus 110 ~li~nAg 116 (271)
T 4iin_A 110 YLVNNAG 116 (271)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6555443
No 348
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=47.61 E-value=54 Score=25.59 Aligned_cols=75 Identities=9% Similarity=0.120 Sum_probs=43.6
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC------CCceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~------~~~~~i 143 (265)
..+++|+|+..+ .+...+.+.|..|++.+-.-.......... ......+.+|+.|.+++++.+. .+..++
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 86 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI--GPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL 86 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 356777776666 467778888988876543322221111111 1245677778888888777654 245555
Q ss_pred EEecC
Q 024619 144 WVESP 148 (265)
Q Consensus 144 ~~~~~ 148 (265)
+-+..
T Consensus 87 v~~Ag 91 (259)
T 4e6p_A 87 VNNAA 91 (259)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 54433
No 349
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=47.59 E-value=35 Score=25.77 Aligned_cols=91 Identities=9% Similarity=0.040 Sum_probs=48.1
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccHHH
Q 024619 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (265)
Q Consensus 81 ~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~ 160 (265)
+++..+......|.+|++..|.-... ..-..++...|.+.......+.+++.+.+..+..+|++.-.+..+-. -++.
T Consensus 24 ~ll~~a~r~~~~g~kV~v~k~~~d~r-~~~~~i~s~~g~~~~a~~~~~~~~i~~~~~~~~dvViIDEaqfl~~~--~v~~ 100 (191)
T 1xx6_A 24 ELIRRIRRAKIAKQKIQVFKPEIDNR-YSKEDVVSHMGEKEQAVAIKNSREILKYFEEDTEVIAIDEVQFFDDE--IVEI 100 (191)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEC--------CEEECTTSCEEECEEESSSTHHHHHCCTTCSEEEECSGGGSCTH--HHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEeccCcc-chHHHHHhhcCCceeeEeeCCHHHHHHHHhccCCEEEEECCCCCCHH--HHHH
Confidence 33445555556677777665443221 11113444556665544445556666666555778888655543211 1455
Q ss_pred HHHHHHHcCCEEEEe
Q 024619 161 IAEMAHAHGALLLVD 175 (265)
Q Consensus 161 i~~~a~~~~~~li~D 175 (265)
+.+++.+ |+.+|+=
T Consensus 101 l~~l~~~-~~~Vi~~ 114 (191)
T 1xx6_A 101 VNKIAES-GRRVICA 114 (191)
T ss_dssp HHHHHHT-TCEEEEE
T ss_pred HHHHHhC-CCEEEEE
Confidence 5555554 8888874
No 350
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=47.52 E-value=30 Score=27.58 Aligned_cols=74 Identities=9% Similarity=0.039 Sum_probs=41.2
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCC-CeEEEeecCCCHHHHHhhcC------CCceE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT-GVVVKRVNTCDLDEVASAIG------PWTKL 142 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~d~~~l~~~~~------~~~~~ 142 (265)
..+++++|+..+ .+...+.+.|..|++.+-.-.......... +.. .+.+..+|+.|.+++++.+. .+..+
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 108 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRL-SAYGDCQAIPADLSSEAGARRLAQALGELSARLDI 108 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-TTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-HhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 467777776666 466778888988876543221111111122 222 35555567778877776654 24555
Q ss_pred EEEe
Q 024619 143 VWVE 146 (265)
Q Consensus 143 i~~~ 146 (265)
++-+
T Consensus 109 lvnn 112 (276)
T 2b4q_A 109 LVNN 112 (276)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 5543
No 351
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=47.50 E-value=58 Score=27.25 Aligned_cols=110 Identities=11% Similarity=-0.005 Sum_probs=61.4
Q ss_pred HHHHhHhCCCceEEec--ch---HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHHHhh
Q 024619 62 SLLAKLDKADRALCFT--SG---MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASA 135 (265)
Q Consensus 62 ~~l~~~~g~~~~i~~~--~g---~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l~~~ 135 (265)
+.+.+.+|.+-.+.+. +| .+++..+..+.++-+. .+++|.. ....+..+.+..++.+.... ..+++++++.
T Consensus 181 ~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~i-~iE~P~~--~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~ 257 (371)
T 2ps2_A 181 TAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDF-ALEAPCA--TWRECISLRRKTDIPIIYDELATNEMSIVKI 257 (371)
T ss_dssp HHHTTTCCTTCEEEEECTTBCCHHHHHHHHHHSCTTCCC-EEECCBS--SHHHHHHHHTTCCSCEEESTTCCSHHHHHHH
T ss_pred HHHHHhcCCCCEEEEECCCCcCHHHHHHHHHHHHhhcCC-cCcCCcC--CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHH
Confidence 4444445555333332 22 1334444444244444 7777764 23334444444444443333 3367777777
Q ss_pred cCC-CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeC
Q 024619 136 IGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDN 176 (265)
Q Consensus 136 ~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~ 176 (265)
+.. ...+|.+- + +..|.+....+++++|+++|+.++.=.
T Consensus 258 i~~~~~d~v~ik-~-~~~GGit~~~~i~~~A~~~g~~~~~~~ 297 (371)
T 2ps2_A 258 LADDAAEGIDLK-I-SKAGGLTRGRRQRDICLAAGYSVSVQE 297 (371)
T ss_dssp HHHTCCSEEEEE-H-HHHTSHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHhCCCCEEEec-h-hhcCCHHHHHHHHHHHHHcCCeEEecC
Confidence 653 35555543 2 346778888999999999999887643
No 352
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=47.48 E-value=30 Score=27.43 Aligned_cols=76 Identities=11% Similarity=0.110 Sum_probs=43.1
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCC--CCeEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++|+|+..+ .+...+.+.|..|++..-.-...........+. ..+..+.+|+.|.+++++.+. .+..
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id 108 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLD 108 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 477888877666 467778888988876432111111111111122 235566677778887777654 2455
Q ss_pred EEEEec
Q 024619 142 LVWVES 147 (265)
Q Consensus 142 ~i~~~~ 147 (265)
+++-+.
T Consensus 109 ~lv~nA 114 (269)
T 4dmm_A 109 VLVNNA 114 (269)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 353
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=47.47 E-value=32 Score=27.35 Aligned_cols=76 Identities=13% Similarity=0.108 Sum_probs=42.3
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCC--CeEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++|+|+.++ .+...+.+.|..|++..-.-...........+.. .+..+.+|+.|.+++++.+. .+..
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 111 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLD 111 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCc
Confidence 467777777666 4677788889888764221111111111222222 34556667778887777664 2455
Q ss_pred EEEEec
Q 024619 142 LVWVES 147 (265)
Q Consensus 142 ~i~~~~ 147 (265)
+++-+.
T Consensus 112 ~lvnnA 117 (271)
T 3v2g_A 112 ILVNSA 117 (271)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 354
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=47.28 E-value=75 Score=24.90 Aligned_cols=76 Identities=13% Similarity=0.116 Sum_probs=44.4
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCC--CCeEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++++|+..+ .+...+.+.|..|++..-.-......+....+. ..+.+..+|+.|.+.+++.+. .+..
T Consensus 26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id 105 (269)
T 3gk3_A 26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVD 105 (269)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 477888887777 467778889988876532211111111111122 346667778888887776654 2566
Q ss_pred EEEEec
Q 024619 142 LVWVES 147 (265)
Q Consensus 142 ~i~~~~ 147 (265)
+++-+.
T Consensus 106 ~li~nA 111 (269)
T 3gk3_A 106 VLINNA 111 (269)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 655444
No 355
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=46.95 E-value=60 Score=26.21 Aligned_cols=99 Identities=12% Similarity=0.007 Sum_probs=54.1
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEc-CCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC-CceEEEEec
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVES 147 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~ 147 (265)
..+++++|+..+ .++..+++.|..|++. ...-......+.......+++++..|+.|.+.+.+++.. ++.+|+-+.
T Consensus 15 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A 94 (335)
T 1rpn_A 15 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 94 (335)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEECc
Confidence 466777766555 4667777778777643 322111001111211234677888888899888887753 455555443
Q ss_pred CCCCccc-ccc-----------HHHHHHHHHHcCC
Q 024619 148 PTNPRQQ-ICD-----------IRKIAEMAHAHGA 170 (265)
Q Consensus 148 ~~np~G~-~~~-----------l~~i~~~a~~~~~ 170 (265)
.....+. ..+ ...+++.|++.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 129 (335)
T 1rpn_A 95 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSP 129 (335)
T ss_dssp SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCT
T ss_pred cccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3221110 111 3467888888763
No 356
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=46.87 E-value=1.3e+02 Score=25.18 Aligned_cols=81 Identities=12% Similarity=0.063 Sum_probs=50.3
Q ss_pred CEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHHHhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCE
Q 024619 94 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGAL 171 (265)
Q Consensus 94 ~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~ 171 (265)
+...+++|..+.....+..+.+..++.+..-. ..+.+++++.+..+ ..+|.+. + +..|.+....+++++|+++|+.
T Consensus 215 ~i~~iEqP~~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k-~-~~~GGit~~~~i~~~A~~~g~~ 292 (370)
T 1chr_A 215 GVELIEQPVGRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLK-L-CNMGGVSATQKIAAVAEASGIA 292 (370)
T ss_dssp TEEEEECCSCTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEEC-T-TTSCSHHHHHHHHHHHHHHTCE
T ss_pred CCCEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEEC-c-cccCCHHHHHHHHHHHHHcCCe
Confidence 44566777655433333344344444443322 34677777777644 4454443 3 4478888999999999999999
Q ss_pred EEEeC
Q 024619 172 LLVDN 176 (265)
Q Consensus 172 li~D~ 176 (265)
+..=.
T Consensus 293 ~~~~~ 297 (370)
T 1chr_A 293 SYGGT 297 (370)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 87643
No 357
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=46.85 E-value=37 Score=26.32 Aligned_cols=93 Identities=11% Similarity=0.047 Sum_probs=42.0
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccHHH
Q 024619 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (265)
Q Consensus 81 ~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~ 160 (265)
+++..+......|.+|++..|.-.... .-..++...|.++...+..+.+++.+.+..+..+|++.=.+..+- ..++.
T Consensus 44 ~lL~~a~r~~~~g~kVli~k~~~d~R~-ge~~i~s~~g~~~~a~~~~~~~~~~~~~~~~~dvViIDEaQF~~~--~~V~~ 120 (214)
T 2j9r_A 44 ELIRRVRRTQFAKQHAIVFKPCIDNRY-SEEDVVSHNGLKVKAVPVSASKDIFKHITEEMDVIAIDEVQFFDG--DIVEV 120 (214)
T ss_dssp HHHHHHHHHHHTTCCEEEEECC------------------CCEEECSSGGGGGGGCCSSCCEEEECCGGGSCT--THHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEeccCCcc-hHHHHHhhcCCeeEEeecCCHHHHHHHHhcCCCEEEEECcccCCH--HHHHH
Confidence 334455555556666766655433210 001233444555544455555666655554567777765655321 12344
Q ss_pred HHHHHHHcCCEEEEeCC
Q 024619 161 IAEMAHAHGALLLVDNS 177 (265)
Q Consensus 161 i~~~a~~~~~~li~D~~ 177 (265)
+..++. .|+.||+-+-
T Consensus 121 l~~l~~-~~~~Vi~~Gl 136 (214)
T 2j9r_A 121 VQVLAN-RGYRVIVAGL 136 (214)
T ss_dssp HHHHHH-TTCEEEEEEC
T ss_pred HHHHhh-CCCEEEEEec
Confidence 444444 4888777543
No 358
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=46.82 E-value=8.6 Score=35.77 Aligned_cols=26 Identities=15% Similarity=0.428 Sum_probs=23.1
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 153 QQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 153 G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
|...+++++++.||++|+-||.|-++
T Consensus 313 ~~~~dfk~LV~~aH~~GI~VIlDvV~ 338 (718)
T 2e8y_A 313 TRKTELKQMINTLHQHGLRVILDVVF 338 (718)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred ccHHHHHHHHHHHHHCCCEEEEEEec
Confidence 34678999999999999999999885
No 359
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=46.82 E-value=59 Score=26.56 Aligned_cols=97 Identities=15% Similarity=0.139 Sum_probs=53.8
Q ss_pred eEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhh---cC---CCCeEEEeecCCCHHHHHhhcCCCceEEE
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRV---TP---KTGVVVKRVNTCDLDEVASAIGPWTKLVW 144 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~---~~---~~g~~~~~~~~~d~~~l~~~~~~~~~~i~ 144 (265)
.+++++|+..+ .++..+.+.|..|++..-.-......+... .. ..+++++..|+.|.+.+.+++. ++.+|+
T Consensus 29 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~vi 107 (352)
T 1sb8_A 29 VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-GVDYVL 107 (352)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-TCSEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc-CCCEEE
Confidence 46666665444 466777777887765332211111111111 11 1467888888889999988876 566665
Q ss_pred EecCCCCccc-c-----------ccHHHHHHHHHHcCC
Q 024619 145 VESPTNPRQQ-I-----------CDIRKIAEMAHAHGA 170 (265)
Q Consensus 145 ~~~~~np~G~-~-----------~~l~~i~~~a~~~~~ 170 (265)
-+......+. . .-...+++.|++.++
T Consensus 108 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 145 (352)
T 1sb8_A 108 HQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKV 145 (352)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred ECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4433221110 0 113578888888875
No 360
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=46.80 E-value=11 Score=33.42 Aligned_cols=26 Identities=15% Similarity=0.330 Sum_probs=23.6
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 153 QQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 153 G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
|...+++++++.|+++|+-||.|-++
T Consensus 77 Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 77 GTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 66678999999999999999999885
No 361
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=46.62 E-value=96 Score=26.00 Aligned_cols=83 Identities=14% Similarity=0.064 Sum_probs=46.3
Q ss_pred cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHHHhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHH
Q 024619 90 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHA 167 (265)
Q Consensus 90 ~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~ 167 (265)
+++-+...+++|..+.....+..+.+..++.+..-. ..+.+++++.+..+ ..+|.+ -+ +..|.+.+..+++++|++
T Consensus 220 l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~-k~-~~~GGit~~~~ia~~A~~ 297 (372)
T 3tj4_A 220 AKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQP-DV-TRLGGITEYIQVADLALA 297 (372)
T ss_dssp TTTSCEEEEESCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECC-CT-TTTTHHHHHHHHHHHHHH
T ss_pred HhhcCCCEEECCCCchhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEe-Cc-cccCCHHHHHHHHHHHHH
Confidence 333344456666544333333333333343332222 33566666666433 343332 23 446888889999999999
Q ss_pred cCCEEEE
Q 024619 168 HGALLLV 174 (265)
Q Consensus 168 ~~~~li~ 174 (265)
+|+.+..
T Consensus 298 ~gi~~~~ 304 (372)
T 3tj4_A 298 HRLPVVP 304 (372)
T ss_dssp TTCCBCC
T ss_pred cCCEEEe
Confidence 9988754
No 362
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=46.46 E-value=11 Score=34.91 Aligned_cols=30 Identities=20% Similarity=0.405 Sum_probs=25.0
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCCcC
Q 024619 150 NPRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (265)
Q Consensus 150 np~G~~~~l~~i~~~a~~~~~~li~D~~~~ 179 (265)
.|++...+++++++.|+++|+-||.|-++-
T Consensus 249 ~~~~~~~efk~lV~~~H~~Gi~VilDvV~N 278 (714)
T 2ya0_A 249 NPEKRIAEFKNLINEIHKRGMGAILDVVYN 278 (714)
T ss_dssp STTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CccchHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 344446789999999999999999998864
No 363
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=46.30 E-value=23 Score=28.38 Aligned_cols=97 Identities=12% Similarity=0.097 Sum_probs=54.2
Q ss_pred eEEecchHHHH--HHHHHhcCCC-CEEEE-cCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecC
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTG-EEIVA-GDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g-~~viv-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~ 148 (265)
.+++++++..+ .++..+++.| ..|.+ ....-.... ......+++++..|..|.+.+.+++.. +..|+.+..
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~----~~l~~~~~~~~~~D~~d~~~l~~~~~~-~d~vi~~a~ 81 (299)
T 2wm3_A 7 LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA----KELRLQGAEVVQGDQDDQVIMELALNG-AYATFIVTN 81 (299)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH----HHHHHTTCEEEECCTTCHHHHHHHHTT-CSEEEECCC
T ss_pred EEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH----HHHHHCCCEEEEecCCCHHHHHHHHhc-CCEEEEeCC
Confidence 45666655444 5666677666 66654 332111111 111234788888999999999988864 566654432
Q ss_pred CCCcc----ccccHHHHHHHHHHcCC-EEEE
Q 024619 149 TNPRQ----QICDIRKIAEMAHAHGA-LLLV 174 (265)
Q Consensus 149 ~np~G----~~~~l~~i~~~a~~~~~-~li~ 174 (265)
..+.. .+.-.+.+++.|++.++ .+|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~ 112 (299)
T 2wm3_A 82 YWESCSQEQEVKQGKLLADLARRLGLHYVVY 112 (299)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCccccchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 11110 01124678888888876 3443
No 364
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=46.14 E-value=55 Score=26.02 Aligned_cols=74 Identities=15% Similarity=0.193 Sum_probs=43.7
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC------CCceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~------~~~~~i 143 (265)
..+++|+|+..+ .+...+.+.|..|++.+-.-.......... ...+....+|+.|.+++++.+. .+..++
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 107 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI--GCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL 107 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--CSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467788877666 466778888988876543322221111111 2345677778888887776654 245555
Q ss_pred EEec
Q 024619 144 WVES 147 (265)
Q Consensus 144 ~~~~ 147 (265)
+-+.
T Consensus 108 vnnA 111 (277)
T 3gvc_A 108 VANA 111 (277)
T ss_dssp EECC
T ss_pred EECC
Confidence 5443
No 365
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=46.12 E-value=45 Score=25.43 Aligned_cols=61 Identities=15% Similarity=0.067 Sum_probs=36.6
Q ss_pred eEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCC--CCeEEEeecCCCHHHHHhhcC
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~~~ 137 (265)
.+++++|+..+ .+...+.+.|..|++..-.-... ....+. ..+.+...|+.|.+++++.+.
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 67 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKL----STVTNCLSNNVGYRARDLASHQEVEQLFE 67 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH----HHHHHTCSSCCCEEECCTTCHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHhhccCeEeecCCCHHHHHHHHH
Confidence 46677776666 46677888887777654322111 122222 245566778888888877664
No 366
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=46.10 E-value=61 Score=25.71 Aligned_cols=75 Identities=12% Similarity=0.037 Sum_probs=43.1
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCC--CCeEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++|+|+..+ .+...+.+.|..|++..-.-....... ..++. ..+....+|+.|.+++++.+. .+..
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 103 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAV-DGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIG 103 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCc
Confidence 467777777666 466778888988876543322111111 11222 245566677878888776654 2455
Q ss_pred EEEEec
Q 024619 142 LVWVES 147 (265)
Q Consensus 142 ~i~~~~ 147 (265)
+++-+.
T Consensus 104 ~lv~nA 109 (279)
T 3sju_A 104 ILVNSA 109 (279)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 367
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=46.04 E-value=77 Score=26.40 Aligned_cols=98 Identities=13% Similarity=0.153 Sum_probs=54.3
Q ss_pred ceEEecchH-HHHHHHHHhcCCC--CEEEEc--CCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEe
Q 024619 72 RALCFTSGM-AALAAVTHLLGTG--EEIVAG--DDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (265)
Q Consensus 72 ~~i~~~~g~-~al~~~~~~~~~g--~~viv~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~ 146 (265)
+.+++.+.+ .++..+....+.| -+|++. .|.+.+ . ....-+...|+++..+.-. .+...+ .++..|++-
T Consensus 143 ~~ILTh~~S~tvl~~l~~A~~~gk~~~V~v~EtRP~~qG-r-ltA~eL~~~GI~vtlI~Ds---a~~~~M-~~Vd~VivG 216 (338)
T 3a11_A 143 DVIMTHCHSKAAISVMKTAWEQGKDIKVIVTETRPKWQG-K-ITAKELASYGIPVIYVVDS---AARHYM-KMTDKVVMG 216 (338)
T ss_dssp CEEEECSCCHHHHHHHHHHHHTTCCCEEEEECCTTTTHH-H-HHHHHHHHTTCCEEEECGG---GTTTTG-GGCSEEEEC
T ss_pred CEEEEeCCcHHHHHHHHHHHHCCCeEEEEEeCCCCchhh-H-HHHHHHHhCCCCEEEEehH---HHHHHH-HhCCEEEEC
Confidence 455554444 6666666665444 456664 355544 2 2223345578888777622 122222 456666663
Q ss_pred cC-CCCcccccc---HHHHHHHHHHcCCEEEEe
Q 024619 147 SP-TNPRQQICD---IRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 147 ~~-~np~G~~~~---l~~i~~~a~~~~~~li~D 175 (265)
.- --..|.+.. --.++-+|+.||+++++=
T Consensus 217 Ad~V~anG~v~NKiGT~~lAl~Ak~~~vPfyV~ 249 (338)
T 3a11_A 217 ADSITVNGAVINKIGTALIALTAKEHRVWTMIA 249 (338)
T ss_dssp CSEECTTSCEEEETTHHHHHHHHHHTTCEEEEE
T ss_pred ccEEecCCCEeecccHHHHHHHHHHcCCCEEEe
Confidence 21 123455532 367888899999998774
No 368
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=46.03 E-value=73 Score=26.46 Aligned_cols=92 Identities=11% Similarity=0.009 Sum_probs=52.8
Q ss_pred eEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCC-
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT- 149 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~- 149 (265)
.+++++|+..+ .++..+++.|..|++..-.-... ......+++++..|+.|.+.+.+++. ++.+|+-+...
T Consensus 31 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~v~~~~~Dl~d~~~~~~~~~-~~d~Vih~A~~~ 104 (379)
T 2c5a_A 31 KISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH-----MTEDMFCDEFHLVDLRVMENCLKVTE-GVDHVFNLAADM 104 (379)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS-----SCGGGTCSEEEECCTTSHHHHHHHHT-TCSEEEECCCCC
T ss_pred eEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccc-----hhhccCCceEEECCCCCHHHHHHHhC-CCCEEEECceec
Confidence 46666665444 46677777787776532211111 01112367888889999999988885 46665544332
Q ss_pred CCccc-ccc-----------HHHHHHHHHHcCC
Q 024619 150 NPRQQ-ICD-----------IRKIAEMAHAHGA 170 (265)
Q Consensus 150 np~G~-~~~-----------l~~i~~~a~~~~~ 170 (265)
++.+. ..+ ...+++.|++.++
T Consensus 105 ~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~ 137 (379)
T 2c5a_A 105 GGMGFIQSNHSVIMYNNTMISFNMIEAARINGI 137 (379)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcccccccCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22111 111 2468888888875
No 369
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=45.90 E-value=15 Score=30.50 Aligned_cols=60 Identities=13% Similarity=0.033 Sum_probs=39.8
Q ss_pred hcCCCCEEEEcCCCCCC------hHHHHHhhcCCCCeEEEeecCC-------------CHHHHHhhcC-CCceEEEEecC
Q 024619 89 LLGTGEEIVAGDDLYGG------TDRLLSRVTPKTGVVVKRVNTC-------------DLDEVASAIG-PWTKLVWVESP 148 (265)
Q Consensus 89 ~~~~g~~viv~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~-------------d~~~l~~~~~-~~~~~i~~~~~ 148 (265)
.+++||+|.+..|+.+. ......+.++..|.+++.-+.. ..++|.+++. +++++|+-..-
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIG 87 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCC
Confidence 36889999999887542 1222335567789999887632 2566776664 67888875443
No 370
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=45.87 E-value=57 Score=25.97 Aligned_cols=77 Identities=14% Similarity=0.111 Sum_probs=43.0
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHH-HHhhcC--CCCeEEEeecCCCHHHHHhhcC------CCc
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRL-LSRVTP--KTGVVVKRVNTCDLDEVASAIG------PWT 140 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~-~~~~~~--~~g~~~~~~~~~d~~~l~~~~~------~~~ 140 (265)
..+++|+|+..+ .+...+.+.|..|++..-.-...... ...... ...+....+|+.|.+++++.+. .+.
T Consensus 26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 105 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGA 105 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCC
Confidence 467777776666 46777888898888754322111111 112222 2235555667778887776654 245
Q ss_pred eEEEEecC
Q 024619 141 KLVWVESP 148 (265)
Q Consensus 141 ~~i~~~~~ 148 (265)
.+++-+..
T Consensus 106 D~lv~nAg 113 (281)
T 3v2h_A 106 DILVNNAG 113 (281)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 55554433
No 371
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=45.75 E-value=45 Score=26.36 Aligned_cols=71 Identities=11% Similarity=0.084 Sum_probs=43.5
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC------CCceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~------~~~~~i 143 (265)
..+++|+|+..+ .+...+.+.|..|++..-. ...+.. ....+.....+|+.|.+++.+.+. .+..++
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 91 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARR----VERLKA-LNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAI 91 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESC----HHHHHT-TCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC----HHHHHH-hhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 467777777666 4667788888777764322 112222 233467777888888888777664 245555
Q ss_pred EEec
Q 024619 144 WVES 147 (265)
Q Consensus 144 ~~~~ 147 (265)
+-+.
T Consensus 92 vnnA 95 (266)
T 3p19_A 92 VNNA 95 (266)
T ss_dssp EECC
T ss_pred EECC
Confidence 5443
No 372
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=45.69 E-value=61 Score=24.93 Aligned_cols=74 Identities=15% Similarity=0.114 Sum_probs=43.0
Q ss_pred eEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC------CCceEEE
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLVW 144 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~------~~~~~i~ 144 (265)
.+++++|+.++ .+...+.+.|..|++..-.-.......... . .++....+|+.|.+++++.+. .+..+++
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 82 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-G-NAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL 82 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-G-GGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-c-CCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 56777777666 466778888988876543322221111111 1 246777778888887776654 2455555
Q ss_pred EecC
Q 024619 145 VESP 148 (265)
Q Consensus 145 ~~~~ 148 (265)
-+..
T Consensus 83 nnAg 86 (235)
T 3l6e_A 83 HCAG 86 (235)
T ss_dssp EECC
T ss_pred ECCC
Confidence 4443
No 373
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=45.66 E-value=1.3e+02 Score=25.10 Aligned_cols=112 Identities=6% Similarity=-0.008 Sum_probs=65.6
Q ss_pred HHHHHHHhHhCCCceEEec--chH---HHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHH
Q 024619 59 ALESLLAKLDKADRALCFT--SGM---AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEV 132 (265)
Q Consensus 59 ~l~~~l~~~~g~~~~i~~~--~g~---~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l 132 (265)
+.-+.+.+..|.+-.+.+. +|. +++..+.. +++-+. .+++|.. ....+..+.+..++.+.... ..+++++
T Consensus 177 e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~-l~~~~i-~iE~P~~--~~~~~~~l~~~~~iPI~~de~i~~~~~~ 252 (379)
T 2rdx_A 177 DRIRACLPLLEPGEKAMADANQGWRVDNAIRLARA-TRDLDY-ILEQPCR--SYEECQQVRRVADQPMKLDECVTGLHMA 252 (379)
T ss_dssp HHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHH-TTTSCC-EEECCSS--SHHHHHHHHTTCCSCEEECTTCCSHHHH
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHH-HHhCCe-EEeCCcC--CHHHHHHHHhhCCCCEEEeCCcCCHHHH
Confidence 3444555566665433332 331 33444444 333344 7777764 33344455455555544333 3477888
Q ss_pred HhhcCC-CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeC
Q 024619 133 ASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDN 176 (265)
Q Consensus 133 ~~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~ 176 (265)
++.+.. ...+|.+- + +..|.+....+++++|+++|+.++.=.
T Consensus 253 ~~~i~~~~~d~v~ik-~-~~~GGit~~~~i~~~A~~~g~~~~~~~ 295 (379)
T 2rdx_A 253 QRIVADRGAEICCLK-I-SNLGGLSKARRTRDFLIDNRMPVVAED 295 (379)
T ss_dssp HHHHHHTCCSEEEEE-T-TTTTSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHcCCCCEEEEe-c-cccCCHHHHHHHHHHHHHcCCeEEEee
Confidence 877763 35565554 3 446888889999999999999877654
No 374
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=45.47 E-value=80 Score=24.56 Aligned_cols=75 Identities=9% Similarity=0.165 Sum_probs=43.5
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCC--CeEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++|+|+..+ .+...+.+.|..|++.+-.-....... ...+.. .+..+.+|+.|.+++++.+. .+..
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 85 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAK-LEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRID 85 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788887666 467778888988876543322222111 222333 35556677778887777654 2455
Q ss_pred EEEEec
Q 024619 142 LVWVES 147 (265)
Q Consensus 142 ~i~~~~ 147 (265)
+++-+.
T Consensus 86 ~lv~nA 91 (257)
T 3imf_A 86 ILINNA 91 (257)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555433
No 375
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=45.45 E-value=67 Score=25.39 Aligned_cols=76 Identities=8% Similarity=0.043 Sum_probs=43.8
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcC--CCCeEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP--KTGVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++|+|+..+ .+...+.+.|..|++..-.-............ ...+....+|+.|.+++++.+. .+..
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 107 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRID 107 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467777777666 46778888898887654332222211112211 1245666677888887776664 2455
Q ss_pred EEEEec
Q 024619 142 LVWVES 147 (265)
Q Consensus 142 ~i~~~~ 147 (265)
+++-+.
T Consensus 108 ~lv~nA 113 (277)
T 4fc7_A 108 ILINCA 113 (277)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 376
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=45.42 E-value=70 Score=25.07 Aligned_cols=68 Identities=6% Similarity=0.029 Sum_probs=43.8
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC------CCceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~------~~~~~i 143 (265)
..+++|+|+..+ .+...+.+.|..|++..-.-. ......+..+..|+.|.+++++.+. .+..++
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 100 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK--------PSADPDIHTVAGDISKPETADRIVREGIERFGRIDSL 100 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCC--------CCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChh--------hcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 477788877666 467778888988876443211 1123357777888888888777664 256665
Q ss_pred EEec
Q 024619 144 WVES 147 (265)
Q Consensus 144 ~~~~ 147 (265)
+-+.
T Consensus 101 v~nA 104 (260)
T 3un1_A 101 VNNA 104 (260)
T ss_dssp EECC
T ss_pred EECC
Confidence 5444
No 377
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=45.39 E-value=91 Score=26.27 Aligned_cols=47 Identities=15% Similarity=0.167 Sum_probs=33.1
Q ss_pred CHHHHHhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeC
Q 024619 128 DLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDN 176 (265)
Q Consensus 128 d~~~l~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~ 176 (265)
+.+++++.+..+ ..+|.+. + +..|.+....+++++|+++|+.+..=.
T Consensus 256 ~~~~~~~~i~~~~~d~v~~k-~-~~~GGit~~~~ia~~A~~~gi~~~~~~ 303 (383)
T 3i4k_A 256 TPAEALAVVKAQAADVIALK-T-TKHGGLLESKKIAAIAEAGGLACHGAT 303 (383)
T ss_dssp SHHHHHHHHHHTCCSEEEEC-T-TTTTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred CHHHHHHHHHcCCCCEEEEc-c-cccCCHHHHHHHHHHHHHcCCeEEeCC
Confidence 566666666533 4454443 3 446888889999999999999987644
No 378
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=45.27 E-value=28 Score=27.42 Aligned_cols=75 Identities=8% Similarity=0.165 Sum_probs=43.2
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC------CCceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~------~~~~~i 143 (265)
..+++++|+..+ .++..+.+.|..|++.+-.-..............++.++..|+.|.+++++.+. .+..++
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 96 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIM 96 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467777776665 466778888888776533211111111112111257778888888888877764 245655
Q ss_pred EEe
Q 024619 144 WVE 146 (265)
Q Consensus 144 ~~~ 146 (265)
+-+
T Consensus 97 i~~ 99 (278)
T 2bgk_A 97 FGN 99 (278)
T ss_dssp EEC
T ss_pred EEC
Confidence 543
No 379
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=45.18 E-value=12 Score=32.28 Aligned_cols=27 Identities=19% Similarity=0.287 Sum_probs=24.2
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 152 RQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
-|...+++++++.|+++|+-||.|-+.
T Consensus 66 ~Gt~~df~~lv~~aH~~Gi~VilD~V~ 92 (441)
T 1lwj_A 66 YGSEREFKEMIEAFHDSGIKVVLDLPI 92 (441)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 466788999999999999999999885
No 380
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=45.01 E-value=50 Score=25.85 Aligned_cols=76 Identities=9% Similarity=0.038 Sum_probs=43.3
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcC-CCCeEEEeecCCCHHHHHhhcC------CCceE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTGVVVKRVNTCDLDEVASAIG------PWTKL 142 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~d~~~l~~~~~------~~~~~ 142 (265)
..+++++|+..+ .++..+.+.|..|++..-.............+ ...+.+..+|+.|.+.+.+.+. .+..+
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 109 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDV 109 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 477888877666 46677888898887654332222111111111 1234556667778888776654 24566
Q ss_pred EEEec
Q 024619 143 VWVES 147 (265)
Q Consensus 143 i~~~~ 147 (265)
++-+.
T Consensus 110 lv~~A 114 (262)
T 3rkr_A 110 LVNNA 114 (262)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 55443
No 381
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=44.81 E-value=42 Score=25.86 Aligned_cols=105 Identities=15% Similarity=0.088 Sum_probs=60.6
Q ss_pred HHHHHHHHHhHhCCC---ceEEecchHHHHHHHHHh-cCCCCEE-EEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHH
Q 024619 57 RDALESLLAKLDKAD---RALCFTSGMAALAAVTHL-LGTGEEI-VAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDE 131 (265)
Q Consensus 57 ~~~l~~~l~~~~g~~---~~i~~~~g~~al~~~~~~-~~~g~~v-iv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~ 131 (265)
.+.|.+.+.+.+|.+ .++++..|..+...+..+ ...|-++ .+.+..- .- .-....|+++.. .++
T Consensus 64 v~~L~~~~~~~lg~~~~~rV~IIGaG~~G~~la~~~~~~~g~~iVg~~D~dp-~k-----~g~~i~gv~V~~-----~~d 132 (211)
T 2dt5_A 64 VPVLKRELRHILGLNRKWGLCIVGMGRLGSALADYPGFGESFELRGFFDVDP-EK-----VGRPVRGGVIEH-----VDL 132 (211)
T ss_dssp HHHHHHHHHHHHTTTSCEEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCT-TT-----TTCEETTEEEEE-----GGG
T ss_pred hHHHHHHHHHHhCcCCCCEEEEECccHHHHHHHHhHhhcCCcEEEEEEeCCH-HH-----HhhhhcCCeeec-----HHh
Confidence 456666667777665 478888887665544432 2224333 3332211 00 001123444432 344
Q ss_pred HHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 132 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 132 l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
+.+.+.+++..++++.|+.. -+++++.|.+.|+..|+.+.-
T Consensus 133 l~ell~~~ID~ViIA~Ps~~------~~ei~~~l~~aGi~~Ilnf~P 173 (211)
T 2dt5_A 133 LPQRVPGRIEIALLTVPREA------AQKAADLLVAAGIKGILNFAP 173 (211)
T ss_dssp HHHHSTTTCCEEEECSCHHH------HHHHHHHHHHHTCCEEEECSS
T ss_pred HHHHHHcCCCEEEEeCCchh------HHHHHHHHHHcCCCEEEECCc
Confidence 55555447888888877542 258999999999988888763
No 382
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=44.50 E-value=14 Score=31.81 Aligned_cols=28 Identities=11% Similarity=0.046 Sum_probs=25.0
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCCcC
Q 024619 152 RQQICDIRKIAEMAHAHGALLLVDNSIM 179 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~~~~li~D~~~~ 179 (265)
-|...+++++++.|+++|+-||.|-++-
T Consensus 78 ~Gt~~d~~~lv~~ah~~Gi~vilD~V~N 105 (424)
T 2dh2_A 78 FGSKEDFDSLLQSAKKKSIRVILDLTPN 105 (424)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4777889999999999999999998853
No 383
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=44.44 E-value=35 Score=29.06 Aligned_cols=114 Identities=11% Similarity=0.037 Sum_probs=70.2
Q ss_pred HHHHHHHhHhCCCceEEec--ch---HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHH
Q 024619 59 ALESLLAKLDKADRALCFT--SG---MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEV 132 (265)
Q Consensus 59 ~l~~~l~~~~g~~~~i~~~--~g---~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l 132 (265)
+.-+.+.+..|.+-.+.+. ++ .+++..+.. +++-+...+++|..+.....+..+.+..++.+..-. ..+++++
T Consensus 197 e~v~avr~avG~d~~l~vDan~~~~~~~ai~~~~~-l~~~~i~~iE~P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~ 275 (403)
T 2ox4_A 197 ERVEAIRNAVGPDVDIIVENHGHTDLVSAIQFAKA-IEEFNIFFYEEINTPLNPRLLKEAKKKIDIPLASGERIYSRWGF 275 (403)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHH-HGGGCEEEEECCSCTTSTHHHHHHHHTCCSCEEECTTCCHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHH-HHhhCCCEEeCCCChhhHHHHHHHHHhCCCCEEecCCcCCHHHH
Confidence 3344555667777444443 33 244444444 444456678888765444445455555555554443 3367888
Q ss_pred HhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEe
Q 024619 133 ASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 133 ~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D 175 (265)
++.+..+ ..+|.+- + +..|.+.+..+++++|+++|+.++.=
T Consensus 276 ~~~i~~~~~d~v~ik-~-~~~GGite~~~i~~~A~~~g~~~~~h 317 (403)
T 2ox4_A 276 LPFLEDRSIDVIQPD-L-GTCGGFTEFKKIADMAHIFEVTVQAH 317 (403)
T ss_dssp HHHHHTTCCSEECCC-H-HHHTHHHHHHHHHHHHHHTTCEECCC
T ss_pred HHHHHcCCCCEEecC-c-cccCCHHHHHHHHHHHHHcCCEEeec
Confidence 8887644 4444432 2 45788889999999999999988773
No 384
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=44.37 E-value=91 Score=26.64 Aligned_cols=112 Identities=13% Similarity=0.118 Sum_probs=65.9
Q ss_pred HHHHHhHhCCCceEEecc--h---HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHHHh
Q 024619 61 ESLLAKLDKADRALCFTS--G---MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVAS 134 (265)
Q Consensus 61 ~~~l~~~~g~~~~i~~~~--g---~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l~~ 134 (265)
-+.+.+.+|.+-.+.+.. | .+|+..+..+- +-+...++.|..+.....+..+.+..++.+..-. ..+.+++++
T Consensus 191 v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~-~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ 269 (412)
T 4e4u_A 191 CRRVREAVGSKADLLFGTHGQMVPSSAIRLAKRLE-KYDPLWFEEPVPPGQEEAIAQVAKHTSIPIATGERLTTKYEFHK 269 (412)
T ss_dssp HHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHHG-GGCCSEEECCSCSSCHHHHHHHHHTCSSCEEECTTCCHHHHHHH
T ss_pred HHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHhh-hcCCcEEECCCChhhHHHHHHHHhhCCCCEEecCccCCHHHHHH
Confidence 345556677765444432 2 14444444443 2234467788765555555555555555544333 336777777
Q ss_pred hcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEe
Q 024619 135 AIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 135 ~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D 175 (265)
.+..+ ..+|.+ -+ ...|.+....+|+++|+++|+.+..=
T Consensus 270 ~i~~~a~d~v~~-d~-~~~GGit~~~kia~~A~~~gi~v~~h 309 (412)
T 4e4u_A 270 LLQAGGASILQL-NV-ARVGGLLEAKKIATLAEVHYAQIAPH 309 (412)
T ss_dssp HHHTTCCSEECC-CT-TTTTSHHHHHHHHHHHHHTTCEECCC
T ss_pred HHHcCCCCEEEe-Cc-cccCCHHHHHHHHHHHHHcCCEEEec
Confidence 77543 444332 23 44788889999999999999987543
No 385
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=44.33 E-value=16 Score=31.90 Aligned_cols=27 Identities=4% Similarity=-0.009 Sum_probs=24.5
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 152 RQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
-|...+++++++.|+++|+-||.|-+.
T Consensus 77 ~Gt~~df~~lv~~aH~~Gi~VilD~V~ 103 (480)
T 1ud2_A 77 YGTKAQLERAIGSLKSNDINVYGDVVM 103 (480)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 577789999999999999999999875
No 386
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=44.31 E-value=61 Score=25.31 Aligned_cols=74 Identities=16% Similarity=0.117 Sum_probs=42.5
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC------CceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP------WTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~------~~~~i 143 (265)
..+++++|+..+ .+...+.+.|..|++.+-.-.... ....... .+...+.+|+.|.+++++.+.. +..++
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~-~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l 90 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQ-AVVAGLE-NGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL 90 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHTCT-TCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHh-cCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467777777666 466778888988876432211111 1111111 1566777888888888776641 45555
Q ss_pred EEec
Q 024619 144 WVES 147 (265)
Q Consensus 144 ~~~~ 147 (265)
+-+.
T Consensus 91 v~~A 94 (263)
T 3ak4_A 91 CANA 94 (263)
T ss_dssp EECC
T ss_pred EECC
Confidence 5433
No 387
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=44.21 E-value=16 Score=31.92 Aligned_cols=28 Identities=7% Similarity=0.080 Sum_probs=24.9
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 151 PRQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 151 p~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
.-|...+++++++.|+++|+-||.|-+.
T Consensus 74 ~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 101 (483)
T 3bh4_A 74 KYGTKSELQDAIGSLHSRNVQVYGDVVL 101 (483)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3477889999999999999999999874
No 388
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=44.21 E-value=1e+02 Score=23.36 Aligned_cols=73 Identities=12% Similarity=0.003 Sum_probs=42.7
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC------CCceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~------~~~~~i 143 (265)
..+++++|+..+ .+...+.+.|..|++..-.-.... ...... .++.+..+|+.|.+++++.+. .+..++
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQ-ALAAEL--EGALPLPGDVREEGDWARAVAAMEEAFGELSAL 82 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHS--TTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHh--hhceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 457788777666 466777888888776432211111 111111 256777888888888776654 245555
Q ss_pred EEec
Q 024619 144 WVES 147 (265)
Q Consensus 144 ~~~~ 147 (265)
+-+.
T Consensus 83 i~~A 86 (234)
T 2ehd_A 83 VNNA 86 (234)
T ss_dssp EECC
T ss_pred EECC
Confidence 5443
No 389
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=44.10 E-value=21 Score=28.43 Aligned_cols=64 Identities=13% Similarity=0.088 Sum_probs=41.7
Q ss_pred hHHHHHhhcCCCCeEEEeecCCCHHH----HHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEE
Q 024619 106 TDRLLSRVTPKTGVVVKRVNTCDLDE----VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (265)
Q Consensus 106 ~~~~~~~~~~~~g~~~~~~~~~d~~~----l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~ 174 (265)
....+...++..|.++..++..|.+. ++..+..++.+|++..... . ......+.+++.|++++.
T Consensus 20 ~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~-~----~~~~~~~~~~~~~iPvV~ 87 (306)
T 8abp_A 20 EWKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDP-K----LGSAIVAKARGYDMKVIA 87 (306)
T ss_dssp HHHHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHTTCCEEEEECSCG-G----GHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeCCCc-h----hhHHHHHHHHHCCCcEEE
Confidence 33445566777899988877666543 4444456788888775432 1 345566778888998664
No 390
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=44.05 E-value=58 Score=25.74 Aligned_cols=64 Identities=22% Similarity=0.205 Sum_probs=38.4
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~ 137 (265)
..+++++|+.++ .++..+.+.|..|++.+-.-.......... ...+.++.+|+.|.+.+++.+.
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~ 96 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL--GNRAEFVSTNVTSEDSVLAAIE 96 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHH
Confidence 467777777666 467778888988876543221111111111 2346777788888777766553
No 391
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=43.99 E-value=31 Score=29.33 Aligned_cols=112 Identities=11% Similarity=-0.006 Sum_probs=64.0
Q ss_pred HHHHHhHhCCCceEE-ec--chH---HHHHHHHHhcCCCCE--EEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHH
Q 024619 61 ESLLAKLDKADRALC-FT--SGM---AALAAVTHLLGTGEE--IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEV 132 (265)
Q Consensus 61 ~~~l~~~~g~~~~i~-~~--~g~---~al~~~~~~~~~g~~--viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l 132 (265)
-+.+.+.+|.+-.+. +. .|. +|+..+..+ ++-+. ..+++|..+.....+..+.+..++.+ .=...+.+++
T Consensus 176 v~avR~a~g~~~~l~~vDan~~~~~~~A~~~~~~l-~~~~i~~~~iEqP~~~~d~~~~~~l~~~~~iPI-dE~~~~~~~~ 253 (391)
T 3gd6_A 176 LSRVKEEFGSRVRIKSYDFSHLLNWKDAHRAIKRL-TKYDLGLEMIESPAPRNDFDGLYQLRLKTDYPI-SEHVWSFKQQ 253 (391)
T ss_dssp HHHHHHHHGGGCEEEEEECTTCSCHHHHHHHHHHH-TTCCSSCCEEECCSCTTCHHHHHHHHHHCSSCE-EEECCCHHHH
T ss_pred HHHHHHHcCCCCcEEEecCCCCcCHHHHHHHHHHH-HhcCCCcceecCCCChhhHHHHHHHHHHcCCCc-CCCCCCHHHH
Confidence 344555566553333 22 221 333333433 33333 46777765544444444444455555 2235577777
Q ss_pred HhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeC
Q 024619 133 ASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDN 176 (265)
Q Consensus 133 ~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~ 176 (265)
++.+..+ ..+|.+. + +..|.+....+++++|+++|+.+..=.
T Consensus 254 ~~~~~~~~~d~v~~k-~-~~~GGit~~~~ia~~A~~~gi~~~~~~ 296 (391)
T 3gd6_A 254 QEMIKKDAIDIFNIS-P-VFIGGLTSAKKAAYAAEVASKDVVLGT 296 (391)
T ss_dssp HHHHHHTCCSEEEEC-H-HHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHcCCCCEEEEC-c-hhcCCHHHHHHHHHHHHHcCCEEEecC
Confidence 7777533 4444432 2 346778888999999999999987644
No 392
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=43.99 E-value=40 Score=26.48 Aligned_cols=23 Identities=9% Similarity=0.018 Sum_probs=21.1
Q ss_pred ccccccHHHHHHHHHHcCCEEEE
Q 024619 152 RQQICDIRKIAEMAHAHGALLLV 174 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~~~~li~ 174 (265)
.|....+.++.++|++||+.++.
T Consensus 190 dG~mar~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 190 APGMLRGDECVAFARRWGLKVCT 212 (233)
T ss_dssp SCEECCHHHHHHHHHHTTCEEEE
T ss_pred CCCcCCHHHHHHHHHHcCCcEEE
Confidence 79999999999999999998874
No 393
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=43.96 E-value=15 Score=32.31 Aligned_cols=27 Identities=30% Similarity=0.477 Sum_probs=24.3
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 152 RQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
-|...+++++++.|+++|+-||.|-+.
T Consensus 78 ~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 104 (488)
T 1wza_A 78 YGTLEDFHKLVEAAHQRGIKVIIDLPI 104 (488)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 467788999999999999999999885
No 394
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=43.90 E-value=17 Score=31.88 Aligned_cols=28 Identities=7% Similarity=0.049 Sum_probs=24.8
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 151 PRQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 151 p~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
.-|...+++++++.|+++|+-||.|-+.
T Consensus 78 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 105 (485)
T 1wpc_A 78 KYGTRSQLQAAVTSLKNNGIQVYGDVVM 105 (485)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3577789999999999999999999874
No 395
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=43.86 E-value=75 Score=25.18 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=43.9
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC------CCceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~------~~~~~i 143 (265)
..+++|+|+..+ .+...+.+.|..|++.+-.-.......... ......+.+|+.|.+++++.+. .+..++
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 105 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI--GSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL 105 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 477777777666 467778888988876543321111111111 1245666778888888777664 245555
Q ss_pred EEecC
Q 024619 144 WVESP 148 (265)
Q Consensus 144 ~~~~~ 148 (265)
+-+.-
T Consensus 106 v~nAg 110 (277)
T 4dqx_A 106 VNNAG 110 (277)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 54443
No 396
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=43.65 E-value=64 Score=25.07 Aligned_cols=122 Identities=10% Similarity=0.146 Sum_probs=57.7
Q ss_pred hhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHhcCCCCEEEEcCC--CCCCh-HHHHHhhcCC-CCeEEEeecCCCH
Q 024619 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDD--LYGGT-DRLLSRVTPK-TGVVVKRVNTCDL 129 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~~~~g~~viv~~~--~~~~~-~~~~~~~~~~-~g~~~~~~~~~d~ 129 (265)
+....+-..+....+...++=+++|+.... .+...+.++..|+..+. ..... ...+.. ... ..++++.- |.
T Consensus 46 ~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~-~g~~~~i~~~~g---da 121 (242)
T 3r3h_A 46 PEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWRE-AKQEHKIKLRLG---PA 121 (242)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHH-TTCTTTEEEEES---CH
T ss_pred HHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCcEEEEEc---CH
Confidence 455555566666667777777777764443 33333444555554332 22222 111111 111 13444332 34
Q ss_pred HHHHhhc-----CCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCC
Q 024619 130 DEVASAI-----GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL 183 (265)
Q Consensus 130 ~~l~~~~-----~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~ 183 (265)
.++...+ .....+|++..+. .....-++++.++.+. |.++++|++...|..
T Consensus 122 ~~~l~~~~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lkp-GG~lv~d~~~~~g~v 177 (242)
T 3r3h_A 122 LDTLHSLLNEGGEHQFDFIFIDADK--TNYLNYYELALKLVTP-KGLIAIDNIFWDGKV 177 (242)
T ss_dssp HHHHHHHHHHHCSSCEEEEEEESCG--GGHHHHHHHHHHHEEE-EEEEEEECSSSSSCS
T ss_pred HHHHHHHhhccCCCCEeEEEEcCCh--HHhHHHHHHHHHhcCC-CeEEEEECCccCCcc
Confidence 4433333 3457788776541 1111123444444333 677777887765554
No 397
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=43.55 E-value=33 Score=27.17 Aligned_cols=66 Identities=11% Similarity=0.093 Sum_probs=37.8
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCC--CeEEEeecCCCHHHHHhhcC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~~~ 137 (265)
..+++|+|+.++ .+...+.+.|..|++....-...........+.. .+....+|+.|.+++++.+.
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 97 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFA 97 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 567777777666 4667788889888764221111121111222222 35556667778888777664
No 398
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=43.53 E-value=95 Score=24.26 Aligned_cols=66 Identities=14% Similarity=0.171 Sum_probs=37.4
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCC-C-CChHHHHHhhcCCCCe--EEEeecCCCHHHHHhhcC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDL-Y-GGTDRLLSRVTPKTGV--VVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~-~-~~~~~~~~~~~~~~g~--~~~~~~~~d~~~l~~~~~ 137 (265)
..+++++|+.++ .+...+.+.|..|++..-. - ...........+..|. ....+|+.|.+++++.+.
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 83 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFD 83 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 467777777666 4677888999888774211 1 0111111122223344 445556778888777664
No 399
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=43.52 E-value=69 Score=24.93 Aligned_cols=66 Identities=12% Similarity=0.184 Sum_probs=38.0
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcC-CCCeEEEeecCCCHHHHHhhcC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTGVVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~d~~~l~~~~~ 137 (265)
..+++++|+.++ .+...+.+.|..|++.+-.-............ ...+.+..+|+.|.+++++.+.
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 76 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLN 76 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHH
Confidence 467777777666 46777888898887654433322222212111 1234555667778887776654
No 400
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=43.51 E-value=30 Score=27.75 Aligned_cols=70 Identities=9% Similarity=0.119 Sum_probs=43.7
Q ss_pred CCCCCChHHHHHhhcCCCCeEEEeecCC-CH----HHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEE
Q 024619 100 DDLYGGTDRLLSRVTPKTGVVVKRVNTC-DL----DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (265)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~-d~----~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~ 174 (265)
+|.|......+...++..|.++...... +. +.++..+..++.+|++..... . .+....+.+++.|++++.
T Consensus 14 ~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~-~----~~~~~~~~~~~~~iPvV~ 88 (313)
T 3m9w_A 14 LERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNG-Q----VLSNVVKEAKQEGIKVLA 88 (313)
T ss_dssp SSTTHHHHHHHHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSST-T----SCHHHHHHHHTTTCEEEE
T ss_pred ChHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCCh-h----hhHHHHHHHHHCCCeEEE
Confidence 3455555555667777889888877654 33 334444456788888765432 2 234567777888887654
No 401
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=43.49 E-value=14 Score=31.62 Aligned_cols=26 Identities=15% Similarity=0.332 Sum_probs=23.8
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 153 QQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 153 G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
|...+++++++.|+++|+-||.|-+.
T Consensus 66 Gt~~d~~~lv~~~h~~Gi~VilD~V~ 91 (405)
T 1ht6_A 66 GNAAELKSLIGALHGKGVQAIADIVI 91 (405)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 67788999999999999999999875
No 402
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=43.48 E-value=17 Score=32.19 Aligned_cols=28 Identities=18% Similarity=0.152 Sum_probs=24.9
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 151 PRQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 151 p~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
.-|...+++++++.|+++|+-||.|-+.
T Consensus 77 ~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 104 (515)
T 1hvx_A 77 KYGTKAQYLQAIQAAHAAGMQVYADVVF 104 (515)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3477889999999999999999999874
No 403
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=43.36 E-value=1.1e+02 Score=24.26 Aligned_cols=89 Identities=19% Similarity=0.225 Sum_probs=49.9
Q ss_pred EEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCC
Q 024619 74 LCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (265)
Q Consensus 74 i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np 151 (265)
+++++|+..+ .++..+.+.|..|++..-.-.... . ....+++++..++.|.+ +.+.+.. .+|+-+.....
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~-~~~~~~~~~~~Dl~d~~-~~~~~~~--d~vih~A~~~~ 74 (312)
T 3ko8_A 3 IVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRR----E-FVNPSAELHVRDLKDYS-WGAGIKG--DVVFHFAANPE 74 (312)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCG----G-GSCTTSEEECCCTTSTT-TTTTCCC--SEEEECCSSCS
T ss_pred EEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCch----h-hcCCCceEEECccccHH-HHhhcCC--CEEEECCCCCC
Confidence 5566665444 567777788888776443222111 1 12456788888888877 7777665 44443332111
Q ss_pred -ccccc-----------cHHHHHHHHHHcCC
Q 024619 152 -RQQIC-----------DIRKIAEMAHAHGA 170 (265)
Q Consensus 152 -~G~~~-----------~l~~i~~~a~~~~~ 170 (265)
..... -...+++.|++.++
T Consensus 75 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 105 (312)
T 3ko8_A 75 VRLSTTEPIVHFNENVVATFNVLEWARQTGV 105 (312)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred chhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 11111 12467888888875
No 404
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=43.27 E-value=34 Score=29.19 Aligned_cols=114 Identities=9% Similarity=-0.015 Sum_probs=69.4
Q ss_pred HHHHHHHhHhCCCceEEec--ch---HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHH
Q 024619 59 ALESLLAKLDKADRALCFT--SG---MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEV 132 (265)
Q Consensus 59 ~l~~~l~~~~g~~~~i~~~--~g---~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l 132 (265)
+.-+.+.+..|.+-.+.+. ++ .+++..+..+ ++-+...+++|..+.....+..+.+..++.+..-. ..+++++
T Consensus 203 e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l-~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~ 281 (407)
T 2o56_A 203 DRMAAIRDAVGPDVDIIAEMHAFTDTTSAIQFGRMI-EELGIFYYEEPVMPLNPAQMKQVADKVNIPLAAGERIYWRWGY 281 (407)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHH-GGGCCSCEECSSCSSSHHHHHHHHHHCCSCEEECTTCCHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHH-HhcCCCEEeCCCChhhHHHHHHHHHhCCCCEEeCCCcCCHHHH
Confidence 3444556667777444443 33 2455454443 33333467888765555555455444555554443 3367888
Q ss_pred HhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEe
Q 024619 133 ASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 133 ~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D 175 (265)
++.+..+ ..+|.+. + +..|.+....+++++|+++|+.++.=
T Consensus 282 ~~~i~~~~~d~v~ik-~-~~~GGite~~~i~~~A~~~g~~~~~h 323 (407)
T 2o56_A 282 RPFLENGSLSVIQPD-I-CTCGGITEVKKICDMAHVYDKTVQIH 323 (407)
T ss_dssp HHHHHTTCCSEECCC-T-TTTTHHHHHHHHHHHHHTTTCEECCC
T ss_pred HHHHHcCCCCEEecC-c-cccCCHHHHHHHHHHHHHcCCeEeec
Confidence 8887644 4444432 3 55788999999999999999988773
No 405
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=43.25 E-value=69 Score=24.83 Aligned_cols=74 Identities=18% Similarity=0.210 Sum_probs=43.9
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC------CCceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~------~~~~~i 143 (265)
..+++++|+..+ .++..+.+.|..|++..-.-.......... ...+.++.+|+.|.+++++.+. .+..++
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 90 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL--GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA 90 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 467777777666 467778888888775433322332222121 2346777788888888877664 245655
Q ss_pred EEec
Q 024619 144 WVES 147 (265)
Q Consensus 144 ~~~~ 147 (265)
+-+.
T Consensus 91 i~~A 94 (265)
T 2o23_A 91 VNCA 94 (265)
T ss_dssp EECC
T ss_pred EECC
Confidence 5443
No 406
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=43.15 E-value=37 Score=28.81 Aligned_cols=47 Identities=15% Similarity=0.107 Sum_probs=30.2
Q ss_pred CHHHHHhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeC
Q 024619 128 DLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDN 176 (265)
Q Consensus 128 d~~~l~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~ 176 (265)
+.+++++.+..+ ..+|.+ -+ +..|.+....+++++|+++|+.++.=.
T Consensus 263 ~~~~~~~~i~~~a~d~v~i-k~-~~~GGit~~~~ia~~A~~~gi~~~~~~ 310 (393)
T 1wuf_A 263 SVKDVEQAHSIGSCRAINL-KL-ARVGGMSSALKIAEYCALNEILVWCGG 310 (393)
T ss_dssp SHHHHHHHHHHTCCSEEEE-CT-GGGTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred CHHHHHHHHHhCCCCEEEe-Ch-hhhCCHHHHHHHHHHHHHcCCeEEecC
Confidence 344555444322 333333 23 446788888999999999999887543
No 407
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=42.95 E-value=76 Score=24.70 Aligned_cols=76 Identities=11% Similarity=0.139 Sum_probs=42.7
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCC-hHHHHHhhcC--CCCeEEEeecCCCHHHHHhhcC------CCc
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGG-TDRLLSRVTP--KTGVVVKRVNTCDLDEVASAIG------PWT 140 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~-~~~~~~~~~~--~~g~~~~~~~~~d~~~l~~~~~------~~~ 140 (265)
..+++++|+..+ .+...+.+.|..|++..-.-.. .........+ ...+....+|+.|.+++++.+. .+.
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 84 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRI 84 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 467778777666 4667788889888765433221 1111111111 1235566677878888777664 245
Q ss_pred eEEEEec
Q 024619 141 KLVWVES 147 (265)
Q Consensus 141 ~~i~~~~ 147 (265)
.+++-+.
T Consensus 85 D~lv~~A 91 (260)
T 1x1t_A 85 DILVNNA 91 (260)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 5555443
No 408
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=42.92 E-value=1.1e+02 Score=26.18 Aligned_cols=115 Identities=11% Similarity=-0.023 Sum_probs=68.3
Q ss_pred HHHHHHhHhCCCceEEec-c-h---HHHHHHHHHhcCCCCEEEEcCC-CCCChHHHHHhhcCCCCeEEEeec-CCCHHHH
Q 024619 60 LESLLAKLDKADRALCFT-S-G---MAALAAVTHLLGTGEEIVAGDD-LYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEV 132 (265)
Q Consensus 60 l~~~l~~~~g~~~~i~~~-~-g---~~al~~~~~~~~~g~~viv~~~-~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l 132 (265)
.-+.+.+.+|.+-.+.+- + | .+|+..+..+ ++-+...++.| ..+.....+..+.+..++.+..-. ..+.+++
T Consensus 202 ~v~avR~a~g~d~~l~vDaN~~~~~~~A~~~~~~L-~~~~i~~iEqP~~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~ 280 (410)
T 3dip_A 202 PFRKIRAAVGQRIEIMCELHSLWGTHAAARICNAL-ADYGVLWVEDPIAKMDNIPAVADLRRQTRAPICGGENLAGTRRF 280 (410)
T ss_dssp HHHHHHHHHTTSSEEEEECTTCBCHHHHHHHHHHG-GGGTCSEEECCBSCTTCHHHHHHHHHHHCCCEEECTTCCSHHHH
T ss_pred HHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHH-HhcCCCEEECCCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHH
Confidence 345566677776444443 2 2 1444444444 33344578888 555444444444444444443332 3478888
Q ss_pred HhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 024619 133 ASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (265)
Q Consensus 133 ~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~ 177 (265)
++.+..+ ..+|.+. + ...|.+.+..+|+++|+++|+.+..=..
T Consensus 281 ~~~l~~~~~d~v~~k-~-~~~GGit~~~~ia~~A~~~gi~~~~h~~ 324 (410)
T 3dip_A 281 HEMLCADAIDFVMLD-L-TWCGGLSEGRKIAALAETHARPLAPHXT 324 (410)
T ss_dssp HHHHHTTCCSEEEEC-T-TTSSCHHHHHHHHHHHHHTTCCEEECSS
T ss_pred HHHHHcCCCCeEeec-c-cccCCHHHHHHHHHHHHHcCCEEeeeCc
Confidence 8877644 4554433 4 4478888999999999999999876443
No 409
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=42.84 E-value=13 Score=32.44 Aligned_cols=31 Identities=13% Similarity=0.175 Sum_probs=26.2
Q ss_pred CCCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 148 PTNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 148 ~~np~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
++..-|...+++++++.|+++|+.||.|-+.
T Consensus 67 idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 97 (471)
T 1jae_A 67 INTRSGDESAFTDMTRRCNDAGVRIYVDAVI 97 (471)
T ss_dssp SEETTEEHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3334577889999999999999999999875
No 410
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=42.78 E-value=53 Score=26.01 Aligned_cols=75 Identities=12% Similarity=0.066 Sum_probs=43.5
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCC--CeEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++++|+..+ .+...+.+.|..|++..-.-......... .+.. .+..+.+|+.|.+++++.+. .+..
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 105 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQE-FRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVD 105 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHH-HHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-HHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 477888877666 46777888898888765432222211111 1222 34555567778887777664 2455
Q ss_pred EEEEec
Q 024619 142 LVWVES 147 (265)
Q Consensus 142 ~i~~~~ 147 (265)
+++-+.
T Consensus 106 ~lv~nA 111 (271)
T 4ibo_A 106 ILVNNA 111 (271)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 411
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=42.77 E-value=77 Score=21.90 Aligned_cols=54 Identities=9% Similarity=0.178 Sum_probs=34.4
Q ss_pred CCCeEEEeecCCCHHHHHhhcCC----------CceEEE-EecCCCCccccccHHHHHHHHHHcCCEEE
Q 024619 116 KTGVVVKRVNTCDLDEVASAIGP----------WTKLVW-VESPTNPRQQICDIRKIAEMAHAHGALLL 173 (265)
Q Consensus 116 ~~g~~~~~~~~~d~~~l~~~~~~----------~~~~i~-~~~~~np~G~~~~l~~i~~~a~~~~~~li 173 (265)
..++.+..++..|++.+.+.+.+ +..+|+ +.... ...++.+|.++++++|+.++
T Consensus 14 ~~~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 14 SFTLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCCCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred eeeEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 35566667767787777776642 223332 33222 23589999999999998763
No 412
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=42.73 E-value=18 Score=32.20 Aligned_cols=29 Identities=17% Similarity=0.116 Sum_probs=25.6
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 150 NPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 150 np~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
..-|...+++++++.||++|+-||.|-++
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 115 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVVP 115 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 34488889999999999999999999875
No 413
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=42.58 E-value=18 Score=31.30 Aligned_cols=28 Identities=21% Similarity=0.261 Sum_probs=24.9
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 151 PRQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 151 p~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
.-|...+++++++.|+++|+-||.|-+.
T Consensus 82 ~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 82 RFGSKEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3477889999999999999999999874
No 414
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=42.47 E-value=98 Score=24.61 Aligned_cols=92 Identities=23% Similarity=0.250 Sum_probs=51.2
Q ss_pred EEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC-CceEEEEecCCC
Q 024619 74 LCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTN 150 (265)
Q Consensus 74 i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~~~n 150 (265)
+++++|+..+ .++..+.+.|..|++.+-.-.... .... .+++++..|+.|.+.+.+++.. +...|+.+....
T Consensus 3 vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~----~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~ 77 (311)
T 2p5y_A 3 VLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR----ENVP-KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQA 77 (311)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG----GGSC-TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCC
T ss_pred EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch----hhcc-cCeEEEECCCCCHHHHHHHHHhcCCCEEEECcccc
Confidence 5566665555 467778888988876433111111 1111 3566777788888888887752 455555433222
Q ss_pred Cccc-cc-----------cHHHHHHHHHHcCC
Q 024619 151 PRQQ-IC-----------DIRKIAEMAHAHGA 170 (265)
Q Consensus 151 p~G~-~~-----------~l~~i~~~a~~~~~ 170 (265)
..+. .. -...+++.|++.++
T Consensus 78 ~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~ 109 (311)
T 2p5y_A 78 SVKVSVEDPVLDFEVNLLGGLNLLEACRQYGV 109 (311)
T ss_dssp CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1110 01 12467888888764
No 415
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=42.13 E-value=1e+02 Score=26.02 Aligned_cols=114 Identities=12% Similarity=-0.062 Sum_probs=65.6
Q ss_pred HHHHHHHhHhCCCceEEec--ch---HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhc-CCCCeEEEeec-CCCHHH
Q 024619 59 ALESLLAKLDKADRALCFT--SG---MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT-PKTGVVVKRVN-TCDLDE 131 (265)
Q Consensus 59 ~l~~~l~~~~g~~~~i~~~--~g---~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~-~~~g~~~~~~~-~~d~~~ 131 (265)
+.-+.+.+.+|.+-.+.+. .| .+|+..+..+- +-+...+++|..+.....+..+. +..++.+..-. ..++++
T Consensus 183 ~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~-~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~ 261 (389)
T 3ozy_A 183 ANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILD-EAGCYWFEEPLSIDDIEGHRILRAQGTPVRIATGENLYTRNA 261 (389)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHH-HTTCSEEESCSCTTCHHHHHHHHTTCCSSEEEECTTCCHHHH
T ss_pred HHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHH-hcCCCEEECCCCcccHHHHHHHHhcCCCCCEEeCCCCCCHHH
Confidence 3445566667766444433 22 13443333332 22334667776554444454555 55555554433 346777
Q ss_pred HHhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEe
Q 024619 132 VASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 132 l~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D 175 (265)
+++.+..+ ..+|.+ -+ ...|.+.+..+++++|+++|+.+..=
T Consensus 262 ~~~~i~~~~~d~v~i-k~-~~~GGit~~~~ia~~A~~~gi~~~~h 304 (389)
T 3ozy_A 262 FNDYIRNDAIDVLQA-DA-SRAGGITEALAISASAASAHLAWNPH 304 (389)
T ss_dssp HHHHHHTTCCSEECC-CT-TTSSCHHHHHHHHHHHHHTTCEECCC
T ss_pred HHHHHHcCCCCEEEe-Cc-cccCCHHHHHHHHHHHHHcCCEEEec
Confidence 77776543 444433 23 44788888999999999999988754
No 416
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=41.90 E-value=26 Score=29.17 Aligned_cols=60 Identities=18% Similarity=0.167 Sum_probs=40.3
Q ss_pred hcCCCCEEEEcCCCCCCh------HHHHHhhcCCCCeEEEeecCC-------------CHHHHHhhcC-CCceEEEEecC
Q 024619 89 LLGTGEEIVAGDDLYGGT------DRLLSRVTPKTGVVVKRVNTC-------------DLDEVASAIG-PWTKLVWVESP 148 (265)
Q Consensus 89 ~~~~g~~viv~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~-------------d~~~l~~~~~-~~~~~i~~~~~ 148 (265)
.+++||+|.+..|+.+.. .....+.++..|.+++.-+.. ..++|.+++. +++++|+-..-
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLG 87 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 368899999999987643 222235567789999987632 2566666664 67888775443
No 417
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=41.80 E-value=32 Score=26.86 Aligned_cols=66 Identities=11% Similarity=0.096 Sum_probs=38.6
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhc----CCCCeEEEeecCCCHHHHHhhcC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT----PKTGVVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~d~~~l~~~~~ 137 (265)
..+++|+|+.++ .+...+.+.|..|++..-.-........... ....+.+..+|+.|.+++.+.+.
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 79 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIK 79 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHH
Confidence 467777777666 4667777888888765433221111111111 11346677788888888777664
No 418
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=41.74 E-value=44 Score=27.21 Aligned_cols=97 Identities=16% Similarity=0.097 Sum_probs=52.0
Q ss_pred eEEecchHHHH--HHHHHhcCCCCEEEEcC-CCC--------CChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC-Cc
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGD-DLY--------GGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WT 140 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~~viv~~-~~~--------~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~-~~ 140 (265)
.+++++|+..+ .++..+.+.|..|++.+ ..- ......+... ...+++++..|+.|.+.+.+++.. ++
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (348)
T 1ek6_A 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TGRSVEFEEMDILDQGALQRLFKKYSF 82 (348)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc-cCCceEEEECCCCCHHHHHHHHHhcCC
Confidence 45666655444 46667777787766532 211 1111111111 123567788888899888887753 46
Q ss_pred eEEEEecCCCCcccc------------ccHHHHHHHHHHcCC
Q 024619 141 KLVWVESPTNPRQQI------------CDIRKIAEMAHAHGA 170 (265)
Q Consensus 141 ~~i~~~~~~np~G~~------------~~l~~i~~~a~~~~~ 170 (265)
.+|+-+......+.. .-...+++.|++.++
T Consensus 83 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 124 (348)
T 1ek6_A 83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124 (348)
T ss_dssp EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 666544332221110 113567788888774
No 419
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=41.69 E-value=51 Score=26.03 Aligned_cols=74 Identities=16% Similarity=0.110 Sum_probs=45.4
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC------CCceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~------~~~~~i 143 (265)
..+++|+|+..+ .+...+.+.|..|++.+-.-.......... ........+|+.|.+++++.+. .+..++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 89 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV--GRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV 89 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--CCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467777777666 467778888988876544433333222222 2346677788888888777664 245555
Q ss_pred EEec
Q 024619 144 WVES 147 (265)
Q Consensus 144 ~~~~ 147 (265)
+-+.
T Consensus 90 v~nA 93 (271)
T 3tzq_B 90 DNNA 93 (271)
T ss_dssp EECC
T ss_pred EECC
Confidence 5443
No 420
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=41.53 E-value=45 Score=25.73 Aligned_cols=81 Identities=6% Similarity=0.010 Sum_probs=53.0
Q ss_pred CEEEEcCC---CCCChHHHHHhhcCCCCeEEEeecCC-CHHHHHhhc-CCCceEEEE--ecCCCCccccccHHHHHHHHH
Q 024619 94 EEIVAGDD---LYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAI-GPWTKLVWV--ESPTNPRQQICDIRKIAEMAH 166 (265)
Q Consensus 94 ~~viv~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~~-~~~~~~i~~--~~~~np~G~~~~l~~i~~~a~ 166 (265)
.+|++..+ .|.--...+...++..|.+++++-.+ .++++.+++ ..++.+|.+ +... +.....++++++..+
T Consensus 93 ~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~--~~~~~~~~~~i~~l~ 170 (215)
T 3ezx_A 93 GLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALM--TTSMLGQKDLMDRLN 170 (215)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEECSS--HHHHTHHHHHHHHHH
T ss_pred CeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEchhcc--cCcHHHHHHHHHHHH
Confidence 35554332 34333445567788899999988654 677775555 467888888 5443 344566899999998
Q ss_pred HcC----CEEEEeC
Q 024619 167 AHG----ALLLVDN 176 (265)
Q Consensus 167 ~~~----~~li~D~ 176 (265)
+.+ +.+++=+
T Consensus 171 ~~~~~~~v~v~vGG 184 (215)
T 3ezx_A 171 EEKLRDSVKCMFGG 184 (215)
T ss_dssp HTTCGGGSEEEEES
T ss_pred HcCCCCCCEEEEEC
Confidence 875 4555544
No 421
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=41.51 E-value=1.1e+02 Score=22.93 Aligned_cols=119 Identities=18% Similarity=0.176 Sum_probs=56.4
Q ss_pred hhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCC----eEEEeecCCCH
Q 024619 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG----VVVKRVNTCDL 129 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~d~ 129 (265)
+....+-..+........++=+.+|+.... .+...+.++..|+..+..- ......+..++..| ++++. .|.
T Consensus 50 ~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~-~~~~~a~~~~~~~~~~~~v~~~~---~d~ 125 (225)
T 3tr6_A 50 PEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDE-KSTALAKEYWEKAGLSDKIGLRL---SPA 125 (225)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCH-HHHHHHHHHHHHTTCTTTEEEEE---SCH
T ss_pred HHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCH-HHHHHHHHHHHHCCCCCceEEEe---CCH
Confidence 344445555555555666777788775544 3333344455666544432 22222223333233 33332 234
Q ss_pred HHHHhhcC-----CCceEEEEecCCCCccccccHHHHHHHHHH---cCCEEEEeCCcCCCCC
Q 024619 130 DEVASAIG-----PWTKLVWVESPTNPRQQICDIRKIAEMAHA---HGALLLVDNSIMSPVL 183 (265)
Q Consensus 130 ~~l~~~~~-----~~~~~i~~~~~~np~G~~~~l~~i~~~a~~---~~~~li~D~~~~~~~~ 183 (265)
.+....+. ....+|++..+ ......+.+.+.+ -|..+++|++...+..
T Consensus 126 ~~~~~~~~~~~~~~~fD~v~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~ 181 (225)
T 3tr6_A 126 KDTLAELIHAGQAWQYDLIYIDAD------KANTDLYYEESLKLLREGGLIAVDNVLRRGQV 181 (225)
T ss_dssp HHHHHHHHTTTCTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSGGGGG
T ss_pred HHHHHHhhhccCCCCccEEEECCC------HHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcc
Confidence 33332222 45667775543 2223333333333 2667777877655543
No 422
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=41.44 E-value=73 Score=24.87 Aligned_cols=75 Identities=15% Similarity=0.087 Sum_probs=43.1
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEc-CCCCCChHHHHHhhcCCC--CeEEEeecCCCHHHHHhhcC------CCc
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWT 140 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~-~~~~~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~~~------~~~ 140 (265)
..+++|+|+..+ .+...+.+.|..|++. .-.-....... ...+.. .+..+.+|+.|.+++++.+. .+.
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETA-EEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRL 83 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 467788887666 4677788889887763 33222111111 222222 35566667778887777664 245
Q ss_pred eEEEEec
Q 024619 141 KLVWVES 147 (265)
Q Consensus 141 ~~i~~~~ 147 (265)
.+++-+.
T Consensus 84 d~lv~nA 90 (258)
T 3oid_A 84 DVFVNNA 90 (258)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 5555443
No 423
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=41.36 E-value=93 Score=24.90 Aligned_cols=62 Identities=15% Similarity=0.256 Sum_probs=38.3
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCC--CeEEEeecCCCHHHHHhhcC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~~~ 137 (265)
.+.++|+|+.++ .+...|.+.|-.|++.+-.-. .+...++.. ....+.+|+.|.+++++.+.
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~----~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~ 95 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKD----VLDAAIAEIGGGAVGIQADSANLAELDRLYE 95 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHCTTCEEEECCTTCHHHHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHcCCCeEEEEecCCCHHHHHHHHH
Confidence 477777777776 467888899988887543322 122222222 24455667778888777664
No 424
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=41.36 E-value=50 Score=25.48 Aligned_cols=74 Identities=11% Similarity=0.117 Sum_probs=45.1
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC--CceEEEEec
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP--WTKLVWVES 147 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~--~~~~i~~~~ 147 (265)
..+++++|+..+ .+...+.+.|..|++..-.-....... .... ....+...|+.+.+.+.+.+.+ +..+++-+.
T Consensus 15 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~A 92 (249)
T 3f9i_A 15 KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLG-NALK-DNYTIEVCNLANKEECSNLISKTSNLDILVCNA 92 (249)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHC-SSEEEEECCTTSHHHHHHHHHTCSCCSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HHhc-cCccEEEcCCCCHHHHHHHHHhcCCCCEEEECC
Confidence 578888887666 466778888988876543322221111 1111 3567777888888888877653 455555433
No 425
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=41.01 E-value=55 Score=23.64 Aligned_cols=53 Identities=13% Similarity=0.151 Sum_probs=37.7
Q ss_pred CHHHHHhhcCC-CceEEEEecCCCCcccccc----HHHHH-HHHHHcCCE-EEEeCCcCC
Q 024619 128 DLDEVASAIGP-WTKLVWVESPTNPRQQICD----IRKIA-EMAHAHGAL-LLVDNSIMS 180 (265)
Q Consensus 128 d~~~l~~~~~~-~~~~i~~~~~~np~G~~~~----l~~i~-~~a~~~~~~-li~D~~~~~ 180 (265)
+.+.+.+.+.+ ++..|++.-|.|+.|...+ .+.++ .+++++++. .++||.++.
T Consensus 43 ~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 43 GLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp CHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred HHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 67888888874 6889999999888887754 23444 445556765 677998763
No 426
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=40.95 E-value=48 Score=28.06 Aligned_cols=59 Identities=12% Similarity=-0.048 Sum_probs=40.1
Q ss_pred cCCCCEEEEcCCCCCCh------HHHHHhhcCCCCeEEEeecCC-------------CHHHHHhhcC-CCceEEEEecC
Q 024619 90 LGTGEEIVAGDDLYGGT------DRLLSRVTPKTGVVVKRVNTC-------------DLDEVASAIG-PWTKLVWVESP 148 (265)
Q Consensus 90 ~~~g~~viv~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~-------------d~~~l~~~~~-~~~~~i~~~~~ 148 (265)
+++||+|.+..|+.+.. .....+.++..|.+++.-+.. ..++|.+++. +++++|+-..-
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rG 118 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIG 118 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 67899999999987542 222235567789999887632 2667777776 67788775443
No 427
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=40.94 E-value=16 Score=31.94 Aligned_cols=27 Identities=30% Similarity=0.463 Sum_probs=24.4
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 152 RQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
-|...+++++++.|+++|+-||.|-++
T Consensus 93 ~Gt~~df~~lv~~~h~~Gi~VilD~V~ 119 (475)
T 2z1k_A 93 LGGNEALRHLLEVAHAHGVRVILDGVF 119 (475)
T ss_dssp GTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 477789999999999999999999875
No 428
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=40.75 E-value=21 Score=28.73 Aligned_cols=66 Identities=15% Similarity=0.144 Sum_probs=38.6
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCC--eEEEeecCCCHHHHHhhcC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~~~ 137 (265)
..+++|+|+..+ .+...+.+.|..|++..-.-...........+..+ +.++.+|+.|.+++++.+.
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 117 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQ 117 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 467777777666 46777888898877643322212222222233333 4555667778877776654
No 429
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=40.70 E-value=16 Score=31.95 Aligned_cols=27 Identities=22% Similarity=0.354 Sum_probs=24.5
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 152 RQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
-|...+++++++.|+++|+-||.|-+.
T Consensus 94 ~Gt~~df~~lv~~~H~~Gi~VilD~V~ 120 (478)
T 2guy_A 94 YGTADDLKALSSALHERGMYLMVDVVA 120 (478)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 477789999999999999999999875
No 430
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=40.54 E-value=65 Score=25.91 Aligned_cols=76 Identities=17% Similarity=0.186 Sum_probs=43.7
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhc-CCCCeEEEeecCCCHHHHHhhcC------CCceE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT-PKTGVVVKRVNTCDLDEVASAIG------PWTKL 142 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~d~~~l~~~~~------~~~~~ 142 (265)
..+++++|+..+ .++..+.+.|..|++..-.-........... ....+.++.+|+.|.+++++.+. .+..+
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 111 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDV 111 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCE
Confidence 467777777666 4677788889888765433222221111111 12245666778888888777664 24555
Q ss_pred EEEec
Q 024619 143 VWVES 147 (265)
Q Consensus 143 i~~~~ 147 (265)
++-+.
T Consensus 112 lvnnA 116 (301)
T 3tjr_A 112 VFSNA 116 (301)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 55443
No 431
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=40.38 E-value=1.1e+02 Score=23.66 Aligned_cols=64 Identities=16% Similarity=0.222 Sum_probs=37.8
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~ 137 (265)
..+++++|+..+ .+...+.+.|..|++.+-.-.......... ...+..+.+|+.|.+++++.+.
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~ 72 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL--GERSMFVRHDVSSEADWTLVMA 72 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--CTTEEEECCCTTCHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCceEEEEccCCCHHHHHHHHH
Confidence 467788777666 466778888988876543221111111111 1245666778888887776654
No 432
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=40.34 E-value=15 Score=32.22 Aligned_cols=27 Identities=11% Similarity=0.187 Sum_probs=24.3
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 152 RQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
-|...+++++++.|+++|+-||.|-+.
T Consensus 99 ~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 125 (488)
T 2wc7_A 99 LGGNEAFKELLDAAHQRNIKVVLDGVF 125 (488)
T ss_dssp GTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 477789999999999999999999875
No 433
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=40.23 E-value=85 Score=26.67 Aligned_cols=76 Identities=12% Similarity=0.142 Sum_probs=38.6
Q ss_pred eEEecchHHHHHHHHHhcCCCC---EEEEcCCCCCChHHHHHhhcCC--CCeEEEeecCCCHHHHHhhcCC-CceEEEEe
Q 024619 73 ALCFTSGMAALAAVTHLLGTGE---EIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIGP-WTKLVWVE 146 (265)
Q Consensus 73 ~i~~~~g~~al~~~~~~~~~g~---~viv~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~~~~-~~~~i~~~ 146 (265)
++++..|.-+-.++..+.+.|+ .|.+.+-.-............. .++....++..|.+++.+++.. +..+|+.+
T Consensus 4 VlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVin~ 83 (405)
T 4ina_A 4 VLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVLNI 83 (405)
T ss_dssp EEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred EEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEEEC
Confidence 4566555444455666666664 5665433211111111111110 1366777788788888777653 35666544
Q ss_pred cC
Q 024619 147 SP 148 (265)
Q Consensus 147 ~~ 148 (265)
.+
T Consensus 84 ag 85 (405)
T 4ina_A 84 AL 85 (405)
T ss_dssp SC
T ss_pred CC
Confidence 33
No 434
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=40.11 E-value=70 Score=24.57 Aligned_cols=75 Identities=8% Similarity=0.116 Sum_probs=42.9
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCC--CCeEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++++|+..+ .+...+.+.|..|++..-.-...... ....+. ..+....+|+.|.+++++.+. .+..
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKF-ENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAID 84 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467778777666 46677888898887654332221111 111222 245666677778877776653 2455
Q ss_pred EEEEec
Q 024619 142 LVWVES 147 (265)
Q Consensus 142 ~i~~~~ 147 (265)
.++-+.
T Consensus 85 ~li~~A 90 (247)
T 3lyl_A 85 ILVNNA 90 (247)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555444
No 435
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=40.09 E-value=63 Score=25.37 Aligned_cols=76 Identities=11% Similarity=0.063 Sum_probs=42.8
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcC--CCCeEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP--KTGVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++|+|+..+ .+...+.+.|..|++..-.-...........+ ...+..+.+|+.|.+++++.+. .+..
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 100 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLD 100 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 477888887776 46777888898887654322211111111111 2345666677777776665553 2455
Q ss_pred EEEEec
Q 024619 142 LVWVES 147 (265)
Q Consensus 142 ~i~~~~ 147 (265)
+++-+.
T Consensus 101 ~lv~nA 106 (266)
T 4egf_A 101 VLVNNA 106 (266)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 555444
No 436
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=40.03 E-value=1.2e+02 Score=23.71 Aligned_cols=76 Identities=9% Similarity=0.029 Sum_probs=42.1
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcC-CCCeEEEeecCCCHHHHHhhcC------CCceE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTGVVVKRVNTCDLDEVASAIG------PWTKL 142 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~d~~~l~~~~~------~~~~~ 142 (265)
..+++++|+..+ .++..+.+.|..|++.+-.-............ ...+.+..+|+.|.+++++.+. .+..+
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~ 111 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI 111 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence 467777776666 46677788888877643321111111111111 1246667778888887776653 24566
Q ss_pred EEEec
Q 024619 143 VWVES 147 (265)
Q Consensus 143 i~~~~ 147 (265)
++-+.
T Consensus 112 li~~A 116 (272)
T 1yb1_A 112 LVNNA 116 (272)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 55444
No 437
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=40.00 E-value=60 Score=25.59 Aligned_cols=74 Identities=11% Similarity=0.065 Sum_probs=43.7
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC------CCceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~------~~~~~i 143 (265)
..+++|+|+..+ .+...+.+.|..|++..-.-.......... ...+..+.+|+.|.+++++.+. .+..++
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 105 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL--GKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL 105 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence 477888887776 467778888988876543221111111111 1245666778888888777664 245555
Q ss_pred EEec
Q 024619 144 WVES 147 (265)
Q Consensus 144 ~~~~ 147 (265)
+-+.
T Consensus 106 vnnA 109 (266)
T 3grp_A 106 VNNA 109 (266)
T ss_dssp EECC
T ss_pred EECC
Confidence 5443
No 438
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=39.97 E-value=71 Score=27.01 Aligned_cols=116 Identities=10% Similarity=0.047 Sum_probs=65.6
Q ss_pred HHHHHHHhHhCCCceEEec--ch---HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHH
Q 024619 59 ALESLLAKLDKADRALCFT--SG---MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEV 132 (265)
Q Consensus 59 ~l~~~l~~~~g~~~~i~~~--~g---~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l 132 (265)
+.-+.+.+.+|.+-.+.+. +| .+++..+..+- +-+...+++|.-+.....+..+.+..++.+.... ..+++++
T Consensus 182 e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~-~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~ 260 (391)
T 2qgy_A 182 QFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKEVS-SFNPYWIEEPVDGENISLLTEIKNTFNMKVVTGEKQSGLVHF 260 (391)
T ss_dssp HHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHHHG-GGCCSEEECSSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHH
T ss_pred HHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHHHH-hcCCCeEeCCCChhhHHHHHHHHhhCCCCEEEcCCcCCHHHH
Confidence 3445555666666433332 33 24444444443 2233366777544434444344344444444333 3467888
Q ss_pred HhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 024619 133 ASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (265)
Q Consensus 133 ~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~ 177 (265)
++.+..+ ..+|.+- + +..|.+....+++++|+++|+.++.=..
T Consensus 261 ~~~i~~~~~d~v~ik-~-~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 261 RELISRNAADIFNPD-I-SGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp HHHHHTTCCSEECCB-T-TTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred HHHHHcCCCCEEEEC-c-chhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 8877543 4444432 3 5578888999999999999998766543
No 439
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=39.92 E-value=69 Score=25.53 Aligned_cols=76 Identities=16% Similarity=0.206 Sum_probs=42.5
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhc------CCCCeEEEeecCCCHHHHHhhcCC-----
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT------PKTGVVVKRVNTCDLDEVASAIGP----- 138 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~d~~~l~~~~~~----- 138 (265)
..+++++|+..+ .++..+.+.|..|++..-.-........... ....+.++.+|+.|.+++.+.+..
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 98 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF 98 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence 367777776666 4667778888887764322111111111111 123466677788888888776642
Q ss_pred -CceEEEEec
Q 024619 139 -WTKLVWVES 147 (265)
Q Consensus 139 -~~~~i~~~~ 147 (265)
+..+++-+.
T Consensus 99 g~id~li~~A 108 (303)
T 1yxm_A 99 GKINFLVNNG 108 (303)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 456555443
No 440
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=39.83 E-value=85 Score=24.45 Aligned_cols=77 Identities=10% Similarity=0.085 Sum_probs=43.5
Q ss_pred ceEEecchH-HHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCC--CCeEEEeecCCCHHHHHhhcC------CCc
Q 024619 72 RALCFTSGM-AAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWT 140 (265)
Q Consensus 72 ~~i~~~~g~-~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~~~------~~~ 140 (265)
..+++++|+ .++ .+...+.+.|..|++.+-.-...........+. ..+.+..+|+.|.+++++.+. .+.
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 102 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRL 102 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCC
Confidence 356666664 345 567778888988876543322222222222122 246677778888888777654 245
Q ss_pred eEEEEecC
Q 024619 141 KLVWVESP 148 (265)
Q Consensus 141 ~~i~~~~~ 148 (265)
.+++-+.-
T Consensus 103 d~li~~Ag 110 (266)
T 3o38_A 103 DVLVNNAG 110 (266)
T ss_dssp CEEEECCC
T ss_pred cEEEECCC
Confidence 66555443
No 441
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=39.83 E-value=1.1e+02 Score=24.78 Aligned_cols=29 Identities=7% Similarity=0.128 Sum_probs=17.1
Q ss_pred ceEEEEecCCCCccccccHHHHHHHHHHcC
Q 024619 140 TKLVWVESPTNPRQQICDIRKIAEMAHAHG 169 (265)
Q Consensus 140 ~~~i~~~~~~np~G~~~~l~~i~~~a~~~~ 169 (265)
..+++-+.|. .||.-.+.+.+.++++++.
T Consensus 134 lPiilYn~P~-~tg~~l~~~~~~~La~~~p 162 (294)
T 3b4u_A 134 RDILVYNIPS-VTMVTLSVELVGRLKAAFP 162 (294)
T ss_dssp CCEEEEECHH-HHSCCCCHHHHHHHHHHCT
T ss_pred CcEEEEECcc-hhCcCCCHHHHHHHHHhCC
Confidence 4455555554 3666666677777774453
No 442
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=39.44 E-value=1.3e+02 Score=25.32 Aligned_cols=48 Identities=17% Similarity=0.161 Sum_probs=31.5
Q ss_pred CHHHHHhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 024619 128 DLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (265)
Q Consensus 128 d~~~l~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~ 177 (265)
+.+++++.+..+ ..+|.+. + ...|.+....+++++|+++|+.+..=..
T Consensus 254 ~~~~~~~~~~~~a~d~v~~k-~-~~~GGit~~~~i~~~A~~~gi~~~~~~~ 302 (386)
T 3fv9_G 254 TETDLIAAIRDDLCDGVGLK-V-SKQGGITPMLRQRAIAAAAGMVMSVQDT 302 (386)
T ss_dssp SHHHHHHHHHTTCCSEEEEE-H-HHHTSHHHHHHHHHHHHHTTCEEEEECS
T ss_pred CHHHHHHHHHhCCCCEEEEC-c-cccCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 556666655433 4444332 2 2357777889999999999999875543
No 443
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=39.37 E-value=26 Score=29.18 Aligned_cols=60 Identities=13% Similarity=-0.021 Sum_probs=40.2
Q ss_pred hcCCCCEEEEcCCCCCCh------HHHHHhhcCCCCeEEEeecCC-------------CHHHHHhhcC-CCceEEEEecC
Q 024619 89 LLGTGEEIVAGDDLYGGT------DRLLSRVTPKTGVVVKRVNTC-------------DLDEVASAIG-PWTKLVWVESP 148 (265)
Q Consensus 89 ~~~~g~~viv~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~-------------d~~~l~~~~~-~~~~~i~~~~~ 148 (265)
.+++||+|.+..|+.+.. .+...+.++..|.+++.-+.. ..++|.+++. +++++|+-..-
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 88 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIG 88 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 367899999999987542 222335567789999886532 2566666664 67888775443
No 444
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=39.06 E-value=74 Score=24.30 Aligned_cols=76 Identities=8% Similarity=0.070 Sum_probs=42.6
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcC--CCCeEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP--KTGVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++++|+..+ .++..+.+.|.+|++..-.-...........+ ...+.++..|+.|.+++++++. .+..
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 87 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGID 87 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 467777776665 46677788888877643321111111111101 2245666778888888877664 2566
Q ss_pred EEEEec
Q 024619 142 LVWVES 147 (265)
Q Consensus 142 ~i~~~~ 147 (265)
+++-+.
T Consensus 88 ~vi~~A 93 (248)
T 2pnf_A 88 ILVNNA 93 (248)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665544
No 445
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=39.01 E-value=69 Score=25.32 Aligned_cols=76 Identities=16% Similarity=0.202 Sum_probs=42.2
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCC--------C----CChHHHHHhhcCCCC--eEEEeecCCCHHHHHhh
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDL--------Y----GGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASA 135 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~--------~----~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~ 135 (265)
..+++|+|+..+ .+...+.+.|..|++.+-. | ...........+..+ +....+|+.|.+++++.
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 95 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALREL 95 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 467777777666 4677788889888764321 1 111111112222233 44555677788877776
Q ss_pred cC------CCceEEEEec
Q 024619 136 IG------PWTKLVWVES 147 (265)
Q Consensus 136 ~~------~~~~~i~~~~ 147 (265)
+. .+..+++-+.
T Consensus 96 ~~~~~~~~g~id~lvnnA 113 (280)
T 3pgx_A 96 VADGMEQFGRLDVVVANA 113 (280)
T ss_dssp HHHHHHHHCCCCEEEECC
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 64 2455555443
No 446
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=39.00 E-value=16 Score=28.99 Aligned_cols=71 Identities=11% Similarity=0.055 Sum_probs=43.6
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC------CCceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~------~~~~~i 143 (265)
..+++|+|+..+ .+...+.+.|..|++..-.-.... ...+..+...+.+|+.|.+++.+.+. .+..++
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 103 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV----TELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAV 103 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH----HHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----HHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 467788877666 466778888877776443322222 22223357788888888887776664 245555
Q ss_pred EEe
Q 024619 144 WVE 146 (265)
Q Consensus 144 ~~~ 146 (265)
+-+
T Consensus 104 v~n 106 (260)
T 3gem_A 104 VHN 106 (260)
T ss_dssp EEC
T ss_pred EEC
Confidence 543
No 447
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=38.97 E-value=92 Score=24.42 Aligned_cols=66 Identities=6% Similarity=0.018 Sum_probs=37.4
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhc--CC--CCeEEEeecCCCHHHHHhhcC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT--PK--TGVVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~--~~--~g~~~~~~~~~d~~~l~~~~~ 137 (265)
..+++++|+..+ .+...+.+.|..|++..-.-........... .. ..+.+...|+.|.+++++.+.
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILS 78 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHH
Confidence 467788777666 4667788889887764322111111111110 11 235666778888888777664
No 448
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=38.75 E-value=33 Score=26.90 Aligned_cols=56 Identities=9% Similarity=0.042 Sum_probs=29.0
Q ss_pred HHhhcCCCCeEEEeecCC-CHH----HHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEE
Q 024619 110 LSRVTPKTGVVVKRVNTC-DLD----EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 173 (265)
Q Consensus 110 ~~~~~~~~g~~~~~~~~~-d~~----~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li 173 (265)
+...++..|.++...+.. +.+ .++..+..++.+|++..... .+..+.+++.++++|
T Consensus 29 i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~--------~~~~~~l~~~~iPvV 89 (276)
T 3jy6_A 29 ISSILESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN--------PQTVQEILHQQMPVV 89 (276)
T ss_dssp HHHHHHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC--------HHHHHHHHTTSSCEE
T ss_pred HHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc--------HHHHHHHHHCCCCEE
Confidence 445556667776666543 222 23333345666666654322 345555566666543
No 449
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=38.69 E-value=1.1e+02 Score=23.91 Aligned_cols=66 Identities=14% Similarity=0.252 Sum_probs=38.9
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEc-CCCCCChHHHHHhhcC-CCCeEEEeecCCCHHHHHhhcC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTP-KTGVVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~-~~~~~~~~~~~~~~~~-~~g~~~~~~~~~d~~~l~~~~~ 137 (265)
..+++|+|+..+ .+...+.+.|..|++. +..-...........+ ...+..+.+|+.|.+++++.+.
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 78 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAIS 78 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 467777777666 4677788889888765 3332222211111111 1235666778888888777664
No 450
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=38.65 E-value=54 Score=28.10 Aligned_cols=94 Identities=12% Similarity=0.125 Sum_probs=58.2
Q ss_pred HHHHHHHHhcCCCC--EEEEcCCCC----CChHHHHHhhcCC-----CCeEEEeec-CCCHHHHHhhcCCC-ceEEEEec
Q 024619 81 AALAAVTHLLGTGE--EIVAGDDLY----GGTDRLLSRVTPK-----TGVVVKRVN-TCDLDEVASAIGPW-TKLVWVES 147 (265)
Q Consensus 81 ~al~~~~~~~~~g~--~viv~~~~~----~~~~~~~~~~~~~-----~g~~~~~~~-~~d~~~l~~~~~~~-~~~i~~~~ 147 (265)
+++..+..+.+.+- .+.+++|.. +.....+..+.+. .++++..=. +.+.+++++.+..+ ..+|.+-
T Consensus 253 ~A~~~~~~L~~~~~~~~l~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik- 331 (413)
T 1kko_A 253 RCAEYIASLEKEAQGLPLYIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQIK- 331 (413)
T ss_dssp HHHHHHHHTGGGGTTSCEEEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSEEEEC-
T ss_pred HHHHHHHHHHhccCCcceEEECCcCCCCCcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCEEEeC-
Confidence 44555555544221 159999986 3344444444444 344433222 34788888887644 4444433
Q ss_pred CCCCccccccHHHHHHHHHHcCCEEEEeC
Q 024619 148 PTNPRQQICDIRKIAEMAHAHGALLLVDN 176 (265)
Q Consensus 148 ~~np~G~~~~l~~i~~~a~~~~~~li~D~ 176 (265)
+ +..|.+.+..+++++|+++|+.++.=.
T Consensus 332 ~-~~~GGitea~~i~~~A~~~gi~~~~~~ 359 (413)
T 1kko_A 332 T-PDLGGIHNIVDAVLYCNKHGMEAYQGG 359 (413)
T ss_dssp G-GGGSSTHHHHHHHHHHHHHTCEEEECC
T ss_pred c-cccCCHHHHHHHHHHHHHcCCeEEecC
Confidence 3 447889899999999999999887643
No 451
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=38.52 E-value=45 Score=26.29 Aligned_cols=81 Identities=16% Similarity=0.154 Sum_probs=47.4
Q ss_pred eEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC-CceEEEEecCC
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPT 149 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~~~ 149 (265)
.+++++|+..+ .++..+.+.|..|....- ...++.|.+.+.+++.. ++.+|+-+...
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r--------------------~~~D~~d~~~~~~~~~~~~~d~vi~~a~~ 66 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDK--------------------KLLDITNISQVQQVVQEIRPHIIIHCAAY 66 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECT--------------------TTSCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEecc--------------------cccCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence 35555555444 567777887877765432 12466688888887763 56666544332
Q ss_pred CCcccc-c-----------cHHHHHHHHHHcCCEEE
Q 024619 150 NPRQQI-C-----------DIRKIAEMAHAHGALLL 173 (265)
Q Consensus 150 np~G~~-~-----------~l~~i~~~a~~~~~~li 173 (265)
...... . -...+++.|+++++.+|
T Consensus 67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v 102 (287)
T 3sc6_A 67 TKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLV 102 (287)
T ss_dssp CCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEE
T ss_pred cChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 221110 1 13568899999887544
No 452
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=38.41 E-value=48 Score=25.71 Aligned_cols=67 Identities=21% Similarity=0.182 Sum_probs=39.5
Q ss_pred CceEEecchHHHH--HHHHHhcCCCCEEEEcC-CCCCChHHHHHhhc-CCCCeEEEeecCCCHHHHHhhcC
Q 024619 71 DRALCFTSGMAAL--AAVTHLLGTGEEIVAGD-DLYGGTDRLLSRVT-PKTGVVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 71 ~~~i~~~~g~~al--~~~~~~~~~g~~viv~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~d~~~l~~~~~ 137 (265)
+..+++++|+..+ .+...+.+.|..|++.. ..-........... ....+.+...|+.|.+++++.+.
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 83 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFD 83 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHH
Confidence 3578888887776 46777888898777633 32222222221111 12345666777888877776654
No 453
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=38.10 E-value=1.8e+02 Score=25.21 Aligned_cols=124 Identities=15% Similarity=0.165 Sum_probs=67.0
Q ss_pred hHHHHHHHHHhHhCC----------CceEEecc--h---HHHH-HHHHHhcCCCCEEE-Ec-CCCCCChHHHHHhhcCCC
Q 024619 56 TRDALESLLAKLDKA----------DRALCFTS--G---MAAL-AAVTHLLGTGEEIV-AG-DDLYGGTDRLLSRVTPKT 117 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~----------~~~i~~~~--g---~~al-~~~~~~~~~g~~vi-v~-~~~~~~~~~~~~~~~~~~ 117 (265)
..+.+.+.+.++++. ..++++.+ | +... .++..+.+.|.+|+ +. ++..+.....+..+.+..
T Consensus 75 v~~~l~~eL~~~L~~~~~~~~~~~~p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~aa~eqL~~~~~~~ 154 (443)
T 3dm5_A 75 IIKIVYEELTKFLGTEAKPIEIKEKPTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRY 154 (443)
T ss_dssp HHHHHHHHHHHHTTSSCCCCCCCSSSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhcCcccccccCCCCeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchhHHHHHHHHHHhc
Confidence 356677777777653 12343332 2 2222 24444556676654 33 444455555556677778
Q ss_pred CeEEEeecC-CCHHHH-----HhhcCCCceEEEEecCCC-Cc--cccccHHHHHHHHHHcCCEEEEeCCcC
Q 024619 118 GVVVKRVNT-CDLDEV-----ASAIGPWTKLVWVESPTN-PR--QQICDIRKIAEMAHAHGALLLVDNSIM 179 (265)
Q Consensus 118 g~~~~~~~~-~d~~~l-----~~~~~~~~~~i~~~~~~n-p~--G~~~~l~~i~~~a~~~~~~li~D~~~~ 179 (265)
|+++...+. .|+.++ ..+..++..+|++..+.. +. .....+..+.+..+.+.+++++|...+
T Consensus 155 gvpv~~~~~~~dp~~i~~~al~~a~~~~~DvVIIDTaGrl~~d~~lm~el~~i~~~~~pd~vlLVvDA~~g 225 (443)
T 3dm5_A 155 HIEVFGNPQEKDAIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIG 225 (443)
T ss_dssp TCEEECCTTCCCHHHHHHHHHHHHHHTTCSEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGGG
T ss_pred CCcEEecCCCCCHHHHHHHHHHHHHhCCCCEEEEECCCcccchHHHHHHHHHHHHhhcCceEEEEEeCCCc
Confidence 887765543 354333 222234578888876632 11 111234555555555678999997753
No 454
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=38.05 E-value=56 Score=26.61 Aligned_cols=66 Identities=18% Similarity=0.246 Sum_probs=38.2
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcC-C--CCeEEEeecCCCHHHHHhhcC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-K--TGVVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~-~--~g~~~~~~~~~d~~~l~~~~~ 137 (265)
..+++|+|+..+ .++..+.+.|..|++..-.-............ . ..+.++.+|+.|.+.+.+++.
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 79 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAAD 79 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHH
Confidence 367777776665 46777888898887654332211111111111 1 146677778888888777664
No 455
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=38.02 E-value=1e+02 Score=25.00 Aligned_cols=66 Identities=21% Similarity=0.267 Sum_probs=37.3
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCC---------CChHHHHHhhcCCCC--eEEEeecCCCHHHHHhhcC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLY---------GGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~---------~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~~~ 137 (265)
..+++|+|+..+ .+...+.+.|..|++.+-.- ...........+..+ +....+|+.|.+++.+.+.
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 106 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQ 106 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 477888887776 46777888898887754220 111111112222234 3444556668777776654
No 456
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=38.02 E-value=79 Score=24.38 Aligned_cols=76 Identities=16% Similarity=0.189 Sum_probs=42.8
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhc-CCCCeEEEeecCCCHHHHHhhcC------CCceE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT-PKTGVVVKRVNTCDLDEVASAIG------PWTKL 142 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~d~~~l~~~~~------~~~~~ 142 (265)
..+++++|+..+ .++..+.+.|..|++..-.-........... ....+.++.+|+.|.+++++.+. .+..+
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 93 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDI 93 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 467777776666 4667778888887764332111111111111 12246677778888888877664 24566
Q ss_pred EEEec
Q 024619 143 VWVES 147 (265)
Q Consensus 143 i~~~~ 147 (265)
++-+.
T Consensus 94 vi~~A 98 (260)
T 3awd_A 94 LVACA 98 (260)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 65443
No 457
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=37.96 E-value=61 Score=26.39 Aligned_cols=65 Identities=11% Similarity=-0.012 Sum_probs=36.0
Q ss_pred CCCChHHHHHhhcCCCCeEEEeecCC-CHHH----HHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEE
Q 024619 102 LYGGTDRLLSRVTPKTGVVVKRVNTC-DLDE----VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 173 (265)
Q Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~~~~~-d~~~----l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li 173 (265)
.|......+...++..|.++...+.. +.+. ++..+..++.+|++..... . ....+.+++.+++++
T Consensus 82 ~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdGiIi~~~~~-~------~~~~~~l~~~~iPvV 151 (344)
T 3kjx_A 82 VFPEVLTGINQVLEDTELQPVVGVTDYLPEKEEKVLYEMLSWRPSGVIIAGLEH-S------EAARAMLDAAGIPVV 151 (344)
T ss_dssp SHHHHHHHHHHHHTSSSSEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCC-C------HHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEECCCC-C------HHHHHHHHhCCCCEE
Confidence 33334444566777788888766543 3332 3334456777777754322 1 244556666777543
No 458
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=37.93 E-value=66 Score=26.95 Aligned_cols=114 Identities=16% Similarity=0.033 Sum_probs=61.8
Q ss_pred HHHHHHHhHhCCCceEEec--ch---HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHH
Q 024619 59 ALESLLAKLDKADRALCFT--SG---MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEV 132 (265)
Q Consensus 59 ~l~~~l~~~~g~~~~i~~~--~g---~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l 132 (265)
+.-+.+.+.+|.+-.+.+. +| .+++..+..+ ++-+...+++|.-+.....+..+.+..++.+.... ..+++++
T Consensus 179 e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l-~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~ 257 (371)
T 2ovl_A 179 DRVSALREHLGDSFPLMVDANMKWTVDGAIRAARAL-APFDLHWIEEPTIPDDLVGNARIVRESGHTIAGGENLHTLYDF 257 (371)
T ss_dssp HHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHH-GGGCCSEEECCSCTTCHHHHHHHHHHHCSCEEECTTCCSHHHH
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHH-HhcCCCEEECCCCcccHHHHHHHHhhCCCCEEeCCCCCCHHHH
Confidence 3445555556655333332 23 1344444433 22233356676544333333333333344443332 3367777
Q ss_pred HhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEe
Q 024619 133 ASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 133 ~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D 175 (265)
++.+..+ ..+|.+- + +..|.+....+++++|+++|+.++.=
T Consensus 258 ~~~i~~~~~d~v~ik-~-~~~GGi~~~~~i~~~A~~~gi~~~~h 299 (371)
T 2ovl_A 258 HNAVRAGSLTLPEPD-V-SNIGGYTTFRKVAALAEANNMLLTSH 299 (371)
T ss_dssp HHHHHHTCCSEECCC-T-TTTTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHcCCCCEEeeC-c-cccCCHHHHHHHHHHHHHcCCeEccc
Confidence 7776533 4444432 3 55788888999999999999987773
No 459
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=37.80 E-value=33 Score=27.44 Aligned_cols=70 Identities=14% Similarity=0.120 Sum_probs=42.0
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCC--CeEEEeecCCCHHHHHhhcCC--CceEEEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIGP--WTKLVWV 145 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~~~~--~~~~i~~ 145 (265)
..+++|+|+..+ .++..+.+.|..|++..-.-.. .....+.. .+.+..+|+.|.+.+++.+.. +..+++-
T Consensus 17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~ 92 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELARRGATVIMAVRDTRK----GEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLIN 92 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence 467777777666 4677788889888765432211 12333333 355566677788888877653 4455443
No 460
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=37.74 E-value=50 Score=26.70 Aligned_cols=69 Identities=13% Similarity=0.185 Sum_probs=41.6
Q ss_pred CCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC------CCHHHHHhh---cC-CCceEEEEecCCCCccccccHHHH
Q 024619 92 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------CDLDEVASA---IG-PWTKLVWVESPTNPRQQICDIRKI 161 (265)
Q Consensus 92 ~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~---~~-~~~~~i~~~~~~np~G~~~~l~~i 161 (265)
++..+++..+.|..+ ++.+|++.+.+.. +++.++.+. ++ .++++|+.+.-.++ +.+
T Consensus 178 ~~~~~v~~H~af~Yf-------~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 243 (286)
T 3gi1_A 178 RSKTFVTQHTAFSYL-------AKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP-------KIA 243 (286)
T ss_dssp SCCEEEEEESCCHHH-------HHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT-------HHH
T ss_pred CCCEEEEECCchHHH-------HHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 477888877776433 3567888765431 244444444 33 57888887755443 223
Q ss_pred HHHHHHcCCEEEE
Q 024619 162 AEMAHAHGALLLV 174 (265)
Q Consensus 162 ~~~a~~~~~~li~ 174 (265)
-.++++.|+.++.
T Consensus 244 ~~la~~~g~~v~~ 256 (286)
T 3gi1_A 244 HAIAKSTGAKVKT 256 (286)
T ss_dssp HHHHHTTTCEEEE
T ss_pred HHHHHHhCCeEEE
Confidence 3567788887653
No 461
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=37.66 E-value=87 Score=24.48 Aligned_cols=76 Identities=14% Similarity=0.104 Sum_probs=42.7
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhc---CCCCeEEEeecCCCHHHHHhhcC------CCc
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT---PKTGVVVKRVNTCDLDEVASAIG------PWT 140 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~d~~~l~~~~~------~~~ 140 (265)
..+++|+|+..+ .+...+.+.|..|++..-.-........... ....+....+|+.|.+++++.+. .+.
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 88 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCA 88 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 467777777666 4677788889888765433221111111111 11235666778888877776653 245
Q ss_pred eEEEEec
Q 024619 141 KLVWVES 147 (265)
Q Consensus 141 ~~i~~~~ 147 (265)
.+++-+.
T Consensus 89 d~lvnnA 95 (265)
T 3lf2_A 89 SILVNNA 95 (265)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 5555443
No 462
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=37.62 E-value=40 Score=25.52 Aligned_cols=70 Identities=11% Similarity=0.134 Sum_probs=39.4
Q ss_pred EEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecCCCCccccccHH--HHHHHHHHcCCEE
Q 024619 95 EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR--KIAEMAHAHGALL 172 (265)
Q Consensus 95 ~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~--~i~~~a~~~~~~l 172 (265)
+|++-+..-.... .+..+++..|++++.+. +++++++ ...|+++.+-+++-....++ .+.+.+++.+.++
T Consensus 4 ~I~iiD~g~~n~~-si~~al~~~G~~~~v~~--~~~~l~~-----~D~lilPG~g~~~~~~~~~~~~~~i~~~~~~~~Pv 75 (211)
T 4gud_A 4 NVVIIDTGCANIS-SVKFAIERLGYAVTISR--DPQVVLA-----ADKLFLPGVGTASEAMKNLTERDLIELVKRVEKPL 75 (211)
T ss_dssp CEEEECCCCTTHH-HHHHHHHHTTCCEEEEC--CHHHHHH-----CSEEEECCCSCHHHHHHHHHHTTCHHHHHHCCSCE
T ss_pred EEEEEECCCChHH-HHHHHHHHCCCEEEEEC--CHHHHhC-----CCEEEECCCCCHHHHHHHHHhcChHHHHHHcCCCE
Confidence 4555555433333 33456677888887654 7777765 45777777665542222222 2455566666554
No 463
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=37.61 E-value=54 Score=26.67 Aligned_cols=99 Identities=11% Similarity=0.083 Sum_probs=52.5
Q ss_pred eEEecchHHHH--HHHHHhcCC--CCEEEE-cCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEec
Q 024619 73 ALCFTSGMAAL--AAVTHLLGT--GEEIVA-GDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVES 147 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~--g~~viv-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~ 147 (265)
.+++++|+..+ .++..+.+. |..|++ ...........+ ......+++++..|+.|.+.+.+++.. ..+|+-+.
T Consensus 6 ~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~d~vih~A 83 (348)
T 1oc2_A 6 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADAELVDKLAAK-ADAIVHYA 83 (348)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT-GGGCSSSEEEEECCTTCHHHHHHHHTT-CSEEEECC
T ss_pred EEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHH-hhhccCCeEEEECCCCCHHHHHHHhhc-CCEEEECC
Confidence 45666655444 455666655 666664 332211111001 111224678888888899999888764 35554433
Q ss_pred CCCCcc-cc-----------ccHHHHHHHHHHcCCEEE
Q 024619 148 PTNPRQ-QI-----------CDIRKIAEMAHAHGALLL 173 (265)
Q Consensus 148 ~~np~G-~~-----------~~l~~i~~~a~~~~~~li 173 (265)
...... .. .-...+++.|+++++.+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v 121 (348)
T 1oc2_A 84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFH 121 (348)
T ss_dssp SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEE
T ss_pred cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 222111 00 113578888888876544
No 464
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=37.60 E-value=19 Score=34.37 Aligned_cols=30 Identities=17% Similarity=0.431 Sum_probs=25.6
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 149 TNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 149 ~np~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
..|.|.+.+++++++.|+++|+-||.|-++
T Consensus 363 ~~~~~~~~efk~lV~~~H~~GI~VILDvV~ 392 (877)
T 3faw_A 363 KDPSARIAELKQLIHDIHKRGMGVILDVVY 392 (877)
T ss_dssp TSTTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCcchHHHHHHHHHHHHHHcCCEEEEEEee
Confidence 344555788999999999999999999886
No 465
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=37.52 E-value=86 Score=24.25 Aligned_cols=74 Identities=8% Similarity=0.091 Sum_probs=43.4
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC------CCceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~------~~~~~i 143 (265)
..+++|+|+..+ .+...+.+.|..|++..-.-....... .... .......+|+.|.+++++.+. .+..++
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 87 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAIS-DYLG-DNGKGMALNVTNPESIEAVLKAITDEFGGVDIL 87 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHHG-GGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhc-ccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467788877666 467778888988876543321111111 1111 234667778888888777664 245555
Q ss_pred EEec
Q 024619 144 WVES 147 (265)
Q Consensus 144 ~~~~ 147 (265)
+-+.
T Consensus 88 v~nA 91 (248)
T 3op4_A 88 VNNA 91 (248)
T ss_dssp EECC
T ss_pred EECC
Confidence 5443
No 466
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=37.46 E-value=38 Score=28.95 Aligned_cols=114 Identities=7% Similarity=-0.023 Sum_probs=70.8
Q ss_pred HHHHHHHhHhCCCceEEec--ch---HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHH
Q 024619 59 ALESLLAKLDKADRALCFT--SG---MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEV 132 (265)
Q Consensus 59 ~l~~~l~~~~g~~~~i~~~--~g---~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l 132 (265)
+.-+.+.+.+|.+-.+.+. ++ .+++..+..+ ++-+...+++|..+.....+..+.+..++.+..-. ..+++++
T Consensus 198 e~v~avRea~G~d~~l~vDan~~~~~~~a~~~~~~l-~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~ 276 (410)
T 2qq6_A 198 ARVAAVREAVGPEVEVAIDMHGRFDIPSSIRFARAM-EPFGLLWLEEPTPPENLDALAEVRRSTSTPICAGENVYTRFDF 276 (410)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHH-GGGCCSEEECCSCTTCHHHHHHHHTTCSSCEEECTTCCSHHHH
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHH-hhcCCCeEECCCChhhHHHHHHHHhhCCCCEEeCCCcCCHHHH
Confidence 3445556667776444443 33 2444444443 33344478888766555555566566666555444 3478888
Q ss_pred HhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEe
Q 024619 133 ASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 133 ~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D 175 (265)
++.+..+ ..+|.+. + +..|.+.+..+++++|+++|+.++.=
T Consensus 277 ~~~i~~~~~d~v~ik-~-~~~GGite~~~ia~~A~~~g~~~~~h 318 (410)
T 2qq6_A 277 RELFAKRAVDYVMPD-V-AKCGGLAEAKRIANLAELDYIPFAPH 318 (410)
T ss_dssp HHHHHTTCCSEECCB-H-HHHTHHHHHHHHHHHHHTTTCCBCCB
T ss_pred HHHHHcCCCCEEecC-c-cccCCHHHHHHHHHHHHHcCCeEeec
Confidence 8888644 4444432 2 45788889999999999999987663
No 467
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=37.33 E-value=84 Score=25.37 Aligned_cols=69 Identities=12% Similarity=0.079 Sum_probs=41.4
Q ss_pred CCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecC----CCHHHHHhhc---C-CCceEEEEecCCCCccccccHHHHHH
Q 024619 92 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----CDLDEVASAI---G-PWTKLVWVESPTNPRQQICDIRKIAE 163 (265)
Q Consensus 92 ~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~d~~~l~~~~---~-~~~~~i~~~~~~np~G~~~~l~~i~~ 163 (265)
++..+++..+.|..+ ++.+|++...+.. +++.++.+.+ + .++++|+.+.-.++. .+-.
T Consensus 189 ~~~~~v~~H~af~Yf-------~~~yGl~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~-------~~~~ 254 (291)
T 1pq4_A 189 PQRKFIVFHPSWAYF-------ARDYNLVQIPIEVEGQEPSAQELKQLIDTAKENNLTMVFGETQFSTK-------SSEA 254 (291)
T ss_dssp SCCEEEESSCCCHHH-------HHHTTCEEEESCBTTBCCCHHHHHHHHHHHHTTTCCEEEEETTSCCH-------HHHH
T ss_pred CCCEEEEECCchHHH-------HHHCCCEEeecccCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChH-------HHHH
Confidence 467888888776433 3567888766542 3455554443 3 568888877555532 2233
Q ss_pred HHHHcCCEEEE
Q 024619 164 MAHAHGALLLV 174 (265)
Q Consensus 164 ~a~~~~~~li~ 174 (265)
++++.|+.++.
T Consensus 255 ia~~~g~~v~~ 265 (291)
T 1pq4_A 255 IAAEIGAGVEL 265 (291)
T ss_dssp HHHHHTCEEEE
T ss_pred HHHHcCCeEEE
Confidence 57777876544
No 468
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=37.31 E-value=1.3e+02 Score=22.73 Aligned_cols=73 Identities=19% Similarity=0.163 Sum_probs=43.8
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC--CceEEEEec
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP--WTKLVWVES 147 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~--~~~~i~~~~ 147 (265)
..+++++|+..+ .++..+.+.|..|++..-.-....... . +..+.+++..|+.|.+.+++.+.. +..+++-+.
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A 84 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLA-K--ECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA 84 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-H--HSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H--hccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECC
Confidence 356777776665 466777888888776433211111111 1 123667778888899999888763 355555443
No 469
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=37.02 E-value=1.2e+02 Score=23.83 Aligned_cols=75 Identities=12% Similarity=0.168 Sum_probs=42.1
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCC--eEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++|+|+.++ .+...+.+.|..|++..-.-....... ..++..+ .....+|+.|.+++++.+. .+..
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 83 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIA-TEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRID 83 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788887666 466778888988876543221111111 1122223 4445567778877776654 2455
Q ss_pred EEEEec
Q 024619 142 LVWVES 147 (265)
Q Consensus 142 ~i~~~~ 147 (265)
+++-+.
T Consensus 84 ~lVnnA 89 (264)
T 3tfo_A 84 VLVNNA 89 (264)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 470
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=36.98 E-value=25 Score=28.46 Aligned_cols=68 Identities=9% Similarity=0.130 Sum_probs=42.5
Q ss_pred CCChHHHHHhhcCCCCeEEEeecCC-CHH----HHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEe
Q 024619 103 YGGTDRLLSRVTPKTGVVVKRVNTC-DLD----EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 103 ~~~~~~~~~~~~~~~g~~~~~~~~~-d~~----~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D 175 (265)
|......+...++..|.++...... +.+ .++..+..++.+|++..... .......+.+++.|++++.=
T Consensus 18 ~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~~-----~~~~~~~~~~~~~giPvV~~ 90 (330)
T 3uug_A 18 WIDDGNNIVKQLQEAGYKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDG-----TTLSDVLKQAGEQGIKVIAY 90 (330)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSG-----GGGHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCCc-----hhHHHHHHHHHHCCCCEEEE
Confidence 3333444567778889988877643 433 34444556788888765432 13456677788889986643
No 471
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=36.97 E-value=62 Score=25.35 Aligned_cols=76 Identities=12% Similarity=0.062 Sum_probs=43.5
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEE-cCCCCCChHHHHHhhc-CCCCeEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVA-GDDLYGGTDRLLSRVT-PKTGVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv-~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++++|+..+ .++..+.+.|..|++ ....-........... ....+.+..+|+.|.+++++.+. .+..
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 106 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWY 106 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 467888887776 467778888988855 3222111111111111 12356677778888888777664 2455
Q ss_pred EEEEec
Q 024619 142 LVWVES 147 (265)
Q Consensus 142 ~i~~~~ 147 (265)
.++-+.
T Consensus 107 ~li~nA 112 (267)
T 4iiu_A 107 GVVSNA 112 (267)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 472
>3b1s_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.55A {Aquifex aeolicus}
Probab=43.16 E-value=7.2 Score=25.63 Aligned_cols=25 Identities=16% Similarity=0.230 Sum_probs=20.5
Q ss_pred HHHHHHHHHHcCCEEEEeCCcCCCC
Q 024619 158 IRKIAEMAHAHGALLLVDNSIMSPV 182 (265)
Q Consensus 158 l~~i~~~a~~~~~~li~D~~~~~~~ 182 (265)
-++|.++|+++|++++.|-.-+...
T Consensus 29 A~~I~e~A~e~~VPi~e~~~LAr~L 53 (87)
T 3b1s_B 29 AQKIVEIAENYSIPVVRKPELARAL 53 (87)
Confidence 3789999999999999997755433
No 473
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=36.90 E-value=19 Score=32.18 Aligned_cols=27 Identities=22% Similarity=0.297 Sum_probs=24.0
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 152 RQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
-|...+++++++.|+++|+-||.|-+.
T Consensus 76 ~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 102 (557)
T 1zja_A 76 YGTMEDFDRLMAELKKRGMRLMVDVVI 102 (557)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 366678999999999999999999885
No 474
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=36.81 E-value=18 Score=31.71 Aligned_cols=27 Identities=22% Similarity=0.351 Sum_probs=24.3
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 152 RQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
-|...+++++++.|+++|+-||.|-+.
T Consensus 94 ~Gt~~df~~lv~~~H~~Gi~VilD~V~ 120 (484)
T 2aaa_A 94 FGTADNLKSLSDALHARGMYLMVDVVP 120 (484)
T ss_dssp TCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 467788999999999999999999885
No 475
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=36.75 E-value=1.7e+02 Score=23.81 Aligned_cols=48 Identities=15% Similarity=0.218 Sum_probs=31.1
Q ss_pred HHHHHhhcCCCceEEEEecCCCCccccccHHHHHHHHHHc-CCEEEEeCC
Q 024619 129 LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH-GALLLVDNS 177 (265)
Q Consensus 129 ~~~l~~~~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~-~~~li~D~~ 177 (265)
.+++.++..++..+++-+.|. .||.-.+.+-+.++++++ ++.=|=|++
T Consensus 124 f~~va~a~~~~lPiilYn~P~-~tg~~l~~~~~~~La~~~pnIvgiKd~~ 172 (313)
T 3dz1_A 124 FRQATEAIGDDVPWVLQDYPL-TLSVVMTPKVIRQIVMDSASCVMLKHED 172 (313)
T ss_dssp HHHHHHHHCTTSCEEEEECHH-HHCCCCCHHHHHHHHHHCSSEEEEEECC
T ss_pred HHHHHHhCCCCCcEEEEeCcc-ccCcCCCHHHHHHHHHhCCCEEEEEcCC
Confidence 444555444346677767774 378888888888998775 555555643
No 476
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=36.74 E-value=1.4e+02 Score=22.69 Aligned_cols=72 Identities=24% Similarity=0.268 Sum_probs=43.0
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC--CceEEEEe
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP--WTKLVWVE 146 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~--~~~~i~~~ 146 (265)
..+++++|+..+ .++..+.+.|..|++..-.-....... . +..+.+++..|+.|.+++++.+.. +..+++-+
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 83 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLV-R--ECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN 83 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-H--HSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H--HcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence 356777776665 466777788888776432211111111 1 123567778888899999888763 35555543
No 477
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=36.69 E-value=17 Score=31.19 Aligned_cols=28 Identities=18% Similarity=0.229 Sum_probs=25.1
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCCcC
Q 024619 152 RQQICDIRKIAEMAHAHGALLLVDNSIM 179 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~~~~li~D~~~~ 179 (265)
-|...+++++++.|+++|+-||.|-+.-
T Consensus 71 ~G~~~d~~~lv~~~h~~Gi~VilD~V~N 98 (422)
T 1ua7_A 71 LGTEQEFKEMCAAAEEYGIKVIVDAVIN 98 (422)
T ss_dssp TEEHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 4788899999999999999999998853
No 478
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=36.69 E-value=18 Score=35.23 Aligned_cols=30 Identities=20% Similarity=0.405 Sum_probs=24.9
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCCcC
Q 024619 150 NPRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (265)
Q Consensus 150 np~G~~~~l~~i~~~a~~~~~~li~D~~~~ 179 (265)
.|++...+++++++.|+++|+-||.|-++-
T Consensus 556 ~~~~~~~efk~lV~~~H~~GI~VIlDvV~N 585 (1014)
T 2ya1_A 556 NPEKRIAEFKNLINEIHKRGMGAILDVVYN 585 (1014)
T ss_dssp CTTHHHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred cccchHHHHHHHHHHHHHcCCEEEEEEecc
Confidence 344446789999999999999999998863
No 479
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=36.45 E-value=20 Score=32.23 Aligned_cols=27 Identities=15% Similarity=0.201 Sum_probs=23.6
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 152 RQQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 152 ~G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
-|...+++++++.|+++|+-||.|-+.
T Consensus 89 ~Gt~~df~~lv~~aH~~Gi~VilD~V~ 115 (570)
T 1m53_A 89 YGTMEDFDSLVAEMKKRNMRLMIDVVI 115 (570)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 355678999999999999999999885
No 480
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=36.25 E-value=72 Score=26.79 Aligned_cols=114 Identities=14% Similarity=-0.049 Sum_probs=67.5
Q ss_pred HHHHHHHhHhCCCceEEec--ch---HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCC-HHH
Q 024619 59 ALESLLAKLDKADRALCFT--SG---MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCD-LDE 131 (265)
Q Consensus 59 ~l~~~l~~~~g~~~~i~~~--~g---~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d-~~~ 131 (265)
+.-+.+.+.+|.+-.+.+. +| .+++..+..+ ++-+...+++|..+.....+..+.+..++.+.... ..+ +++
T Consensus 188 e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l-~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~ 266 (382)
T 1rvk_A 188 KACAAVREAVGPDIRLMIDAFHWYSRTDALALGRGL-EKLGFDWIEEPMDEQSLSSYKWLSDNLDIPVVGPESAAGKHWH 266 (382)
T ss_dssp HHHHHHHHHHCTTSEEEEECCTTCCHHHHHHHHHHH-HTTTCSEEECCSCTTCHHHHHHHHHHCSSCEEECSSCSSHHHH
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHH-HhcCCCEEeCCCChhhHHHHHHHHhhCCCCEEEeCCccCcHHH
Confidence 4445556667766444333 33 2444444433 33333467787655444444444444455444433 346 888
Q ss_pred HHhhcCCC-ceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEe
Q 024619 132 VASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (265)
Q Consensus 132 l~~~~~~~-~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D 175 (265)
+++.+..+ ..+|.+- + +..|.+....+++++|+++|+.++.=
T Consensus 267 ~~~~i~~~~~d~v~ik-~-~~~GGit~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 267 RAEWIKAGACDILRTG-V-NDVGGITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp HHHHHHTTCCSEEEEC-H-HHHTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHcCCCCEEeeC-c-hhcCCHHHHHHHHHHHHHcCCeEeec
Confidence 88887644 5555543 3 44688888999999999999977665
No 481
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=36.20 E-value=58 Score=29.68 Aligned_cols=76 Identities=13% Similarity=0.142 Sum_probs=52.5
Q ss_pred cCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCC-CHHHHHhhcC-CCceEEEEecCCCCccccccHHHHHHHHH
Q 024619 90 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAH 166 (265)
Q Consensus 90 ~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~~~-~~~~~i~~~~~~np~G~~~~l~~i~~~a~ 166 (265)
+++||.|.+..|.-+.+...+ .++...|+.++.++.. ..+.+...+. -++++|+........|...++..+++-+.
T Consensus 136 v~~Gd~V~i~~~~~~e~v~a~-lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~ 213 (663)
T 1ry2_A 136 VRKGDTVAVYMPMVPEAIITL-LAISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDAL 213 (663)
T ss_dssp CCTTCEEEECCCSSHHHHHHH-HHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHT
T ss_pred CCCCCEEEEEcCCCHHHHHHH-HHHHHcCCEEEeeCCCCCHHHHHHHHHhcCCeEEEEccccccCCcccchHHHHHHHH
Confidence 578999999888766666555 4445578777777644 6777777775 46788887766555677777766665443
No 482
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=36.19 E-value=1.1e+02 Score=23.77 Aligned_cols=75 Identities=15% Similarity=0.135 Sum_probs=40.8
Q ss_pred eEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCC--hHHHHHhhcC-CCCeEEEeecCCCHHHHHhhcC------CCce
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGG--TDRLLSRVTP-KTGVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~--~~~~~~~~~~-~~g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
.+++++|+..+ .+...+.+.|..|++..-.-.. .......... ...+..+.+|+.|.+++++.+. .+..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 83 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFD 83 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 56777777666 4667777788887764332111 1111111111 1235566677778887776654 2455
Q ss_pred EEEEec
Q 024619 142 LVWVES 147 (265)
Q Consensus 142 ~i~~~~ 147 (265)
+++-+.
T Consensus 84 ~lv~nA 89 (258)
T 3a28_C 84 VLVNNA 89 (258)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555433
No 483
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=36.15 E-value=23 Score=30.57 Aligned_cols=26 Identities=19% Similarity=0.406 Sum_probs=22.7
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 153 QQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 153 G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
|...+++++++.|+++|+-||.|-+.
T Consensus 81 Gt~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 81 GTLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 45567899999999999999999874
No 484
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=36.00 E-value=60 Score=27.50 Aligned_cols=115 Identities=10% Similarity=0.044 Sum_probs=63.6
Q ss_pred HHHHHHhHhCCCceEEec--ch---HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeec-CCCHHHHH
Q 024619 60 LESLLAKLDKADRALCFT--SG---MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVA 133 (265)
Q Consensus 60 l~~~l~~~~g~~~~i~~~--~g---~~al~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l~ 133 (265)
.-+.+.+.+|.+-.+.+. +| .+++..+..+ ++-+...+++|.-+.....+..+.+..++.+.... ..+.++++
T Consensus 178 ~v~avR~a~g~d~~l~vDan~~~~~~~a~~~~~~l-~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 256 (397)
T 2qde_A 178 MVAEVRRAVGDDVDLFIDINGAWTYDQALTTIRAL-EKYNLSKIEQPLPAWDLDGMARLRGKVATPIYADESAQELHDLL 256 (397)
T ss_dssp HHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHH-GGGCCSCEECCSCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHH
T ss_pred HHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHH-HhCCCCEEECCCChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHH
Confidence 334555556655333332 22 1344333333 22233356676544444444455454454444333 33677777
Q ss_pred hhcCC-CceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 024619 134 SAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (265)
Q Consensus 134 ~~~~~-~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~ 177 (265)
+.+.. ...+|.+- + +..|.+....+++++|+++|+.++.=..
T Consensus 257 ~~i~~~~~d~v~ik-~-~~~GGit~~~~i~~~A~~~g~~~~~~~~ 299 (397)
T 2qde_A 257 AIINKGAADGLMIK-T-QKAGGLLKAQRWLTLARLANLPVICGCM 299 (397)
T ss_dssp HHHHHTCCSEEEEC-H-HHHTSHHHHHHHHHHHHHHTCCEEECCC
T ss_pred HHHHcCCCCEEEEe-c-cccCCHHHHHHHHHHHHHcCCeEEEecC
Confidence 77653 35555443 2 4468888889999999999998777643
No 485
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=35.93 E-value=43 Score=26.15 Aligned_cols=75 Identities=9% Similarity=0.102 Sum_probs=44.0
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCC--CeEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++++|+..+ .+...+.+.|..|++..-.-...........+.. .+.+..+|+.|.+++++.+. .+..
T Consensus 8 k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id 87 (264)
T 3i4f_A 8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKID 87 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 467788887666 4677788889888764222122222222333332 35666778888888777664 2455
Q ss_pred EEEEe
Q 024619 142 LVWVE 146 (265)
Q Consensus 142 ~i~~~ 146 (265)
+++-+
T Consensus 88 ~lv~~ 92 (264)
T 3i4f_A 88 FLINN 92 (264)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 55543
No 486
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=35.93 E-value=21 Score=32.02 Aligned_cols=26 Identities=15% Similarity=0.233 Sum_probs=23.2
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCCc
Q 024619 153 QQICDIRKIAEMAHAHGALLLVDNSI 178 (265)
Q Consensus 153 G~~~~l~~i~~~a~~~~~~li~D~~~ 178 (265)
|...+++++++.|+++|+-||.|-+.
T Consensus 76 Gt~~df~~lv~~~h~~Gi~VilD~V~ 101 (558)
T 1uok_A 76 GTMEDWDELLHEMHERNMKLMMDLVV 101 (558)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 55678999999999999999999875
No 487
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=35.91 E-value=44 Score=25.71 Aligned_cols=74 Identities=16% Similarity=0.123 Sum_probs=41.9
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEc-CCCCCChHHHHHhhcC--CCCeEEEeecCCCHHHHHhhcC------CCc
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTP--KTGVVVKRVNTCDLDEVASAIG------PWT 140 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~-~~~~~~~~~~~~~~~~--~~g~~~~~~~~~d~~~l~~~~~------~~~ 140 (265)
..+++++|+..+ .++..+.+.|..|++. ...-....... ...+ ...+.+..+|+.|.+.+++.+. .+.
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 84 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATA-EEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRI 84 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHH-HHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHH-HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 356777777666 4667788888887765 32222111111 1111 2235666778888888777654 245
Q ss_pred eEEEEe
Q 024619 141 KLVWVE 146 (265)
Q Consensus 141 ~~i~~~ 146 (265)
..++-+
T Consensus 85 d~vi~~ 90 (247)
T 2hq1_A 85 DILVNN 90 (247)
T ss_dssp CEEEEC
T ss_pred CEEEEC
Confidence 555544
No 488
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=35.72 E-value=1.2e+02 Score=23.29 Aligned_cols=66 Identities=12% Similarity=0.139 Sum_probs=37.2
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcC--CCCeEEEeecCCCHHHHHhhcC
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP--KTGVVVKRVNTCDLDEVASAIG 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~d~~~l~~~~~ 137 (265)
..+++++|+..+ .++..+.+.|..|++..-.-...........+ ...+.+..+|+.|.+.+++.+.
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~ 84 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQ 84 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHH
Confidence 356777776666 46677888887776543221222211112111 2346667778888887776654
No 489
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=35.69 E-value=1.2e+02 Score=23.36 Aligned_cols=72 Identities=11% Similarity=0.221 Sum_probs=43.4
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC--CCceEEEEec
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG--PWTKLVWVES 147 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~--~~~~~i~~~~ 147 (265)
..+++++|+..+ .+...+.+.|..|++.+-. ........+..++.....|+.|.+++++... .+..+++-+.
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~A 82 (246)
T 2ag5_A 7 KVIILTAAAQGIGQAAALAFAREGAKVIATDIN----ESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVA 82 (246)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECC
Confidence 467788777666 4667788889888764322 1112222222256777788888888875543 3455555443
No 490
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=35.51 E-value=86 Score=24.13 Aligned_cols=76 Identities=9% Similarity=0.180 Sum_probs=41.7
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCC-CCCChHHHHHhhc-CCCCeEEEeecCCCHHHHHhhcC------CCce
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDD-LYGGTDRLLSRVT-PKTGVVVKRVNTCDLDEVASAIG------PWTK 141 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~-~~~~~~~~~~~~~-~~~g~~~~~~~~~d~~~l~~~~~------~~~~ 141 (265)
..+++++|+..+ .+...+.+.|..|++..- .-........... ....+....+|+.|.+++++.+. .+..
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 84 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVD 84 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 357777777666 466778888988776432 2111111111111 11235566677888888777664 2455
Q ss_pred EEEEec
Q 024619 142 LVWVES 147 (265)
Q Consensus 142 ~i~~~~ 147 (265)
+++-+.
T Consensus 85 ~lv~nA 90 (246)
T 2uvd_A 85 ILVNNA 90 (246)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 491
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=35.48 E-value=66 Score=24.74 Aligned_cols=76 Identities=9% Similarity=0.119 Sum_probs=43.2
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhc-CCCCeEEEeecCCCHHHHHhhcC------CCceE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT-PKTGVVVKRVNTCDLDEVASAIG------PWTKL 142 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~d~~~l~~~~~------~~~~~ 142 (265)
..+++++|+..+ .++..+.+.|..|++..-.-........... ....+.++..|+.|.+++++.+. .+..+
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 91 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI 91 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 467778777666 4677788889887764332111111111111 12245666778888888877664 25666
Q ss_pred EEEec
Q 024619 143 VWVES 147 (265)
Q Consensus 143 i~~~~ 147 (265)
|+-+.
T Consensus 92 vi~~A 96 (255)
T 1fmc_A 92 LVNNA 96 (255)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 65443
No 492
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=35.44 E-value=94 Score=25.37 Aligned_cols=76 Identities=12% Similarity=0.153 Sum_probs=43.0
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCC-CCChH---HHHHhhcC--CCCeEEEeecCCCHHHHHhhcC------
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDL-YGGTD---RLLSRVTP--KTGVVVKRVNTCDLDEVASAIG------ 137 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~-~~~~~---~~~~~~~~--~~g~~~~~~~~~d~~~l~~~~~------ 137 (265)
..+++|+|+..+ .+...+.+.|..|++..-. ..... ..+....+ ...+.++.+|+.|.+.+.+++.
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~ 85 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGED 85 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 467788877666 4677788889988753211 11111 11111111 1346677778888888777664
Q ss_pred CCceEEEEec
Q 024619 138 PWTKLVWVES 147 (265)
Q Consensus 138 ~~~~~i~~~~ 147 (265)
.+..+++-+.
T Consensus 86 g~iD~lVnnA 95 (324)
T 3u9l_A 86 GRIDVLIHNA 95 (324)
T ss_dssp SCCSEEEECC
T ss_pred CCCCEEEECC
Confidence 2455555443
No 493
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=35.39 E-value=70 Score=25.20 Aligned_cols=83 Identities=14% Similarity=0.137 Sum_probs=49.3
Q ss_pred CceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC-CceEEEEec
Q 024619 71 DRALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVES 147 (265)
Q Consensus 71 ~~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~ 147 (265)
+..+++++|+.-+ .++..+.+.|..|++..-. ..++.|.+.+.+++.. ++.+|+-+.
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------~~Dl~d~~~~~~~~~~~~~d~vih~A 71 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------DLDITNVLAVNKFFNEKKPNVVINCA 71 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc--------------------cCCCCCHHHHHHHHHhcCCCEEEECC
Confidence 3567777776555 4677788888777754321 2466788888877753 466665443
Q ss_pred CCCCccc-cc-----------cHHHHHHHHHHcCCEEE
Q 024619 148 PTNPRQQ-IC-----------DIRKIAEMAHAHGALLL 173 (265)
Q Consensus 148 ~~np~G~-~~-----------~l~~i~~~a~~~~~~li 173 (265)
....... .. -...+++.|++.++.+|
T Consensus 72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv 109 (292)
T 1vl0_A 72 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIV 109 (292)
T ss_dssp CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEE
T ss_pred ccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 3221111 01 13678888888776444
No 494
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=35.14 E-value=1.6e+02 Score=22.85 Aligned_cols=124 Identities=15% Similarity=0.126 Sum_probs=58.7
Q ss_pred hhHHHHHHHHHhHhCCCceEEecchHHHHH-HHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCe--EEEeecCCCHHH
Q 024619 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNTCDLDE 131 (265)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~g~~al~-~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~d~~~ 131 (265)
+....+-..+.+..+...++=+.+|+.... .+...+.++..|+..+.. +......+...+..|. ++..+. .|..+
T Consensus 65 ~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s-~~~~~~a~~~~~~~g~~~~i~~~~-gda~~ 142 (247)
T 1sui_A 65 ADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDIN-KENYELGLPVIKKAGVDHKIDFRE-GPALP 142 (247)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESC-CHHHHHHHHHHHHTTCGGGEEEEE-SCHHH
T ss_pred HHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECC-HHHHHHHHHHHHHcCCCCCeEEEE-CCHHH
Confidence 445555555666666677888888775443 333334445555544433 2222222333333332 122222 23433
Q ss_pred HHhhc------CCCceEEEEecCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCCCC
Q 024619 132 VASAI------GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL 183 (265)
Q Consensus 132 l~~~~------~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~li~D~~~~~~~~ 183 (265)
+...+ .....+|++.... .....-++.+.++.+. |..+++|++...|..
T Consensus 143 ~l~~l~~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lkp-GG~lv~d~~~~~g~v 197 (247)
T 1sui_A 143 VLDEMIKDEKNHGSYDFIFVDADK--DNYLNYHKRLIDLVKV-GGVIGYDNTLWNGSV 197 (247)
T ss_dssp HHHHHHHSGGGTTCBSEEEECSCS--TTHHHHHHHHHHHBCT-TCCEEEECTTGGGGG
T ss_pred HHHHHHhccCCCCCEEEEEEcCch--HHHHHHHHHHHHhCCC-CeEEEEecCCcCCcc
Confidence 32222 3456777775431 1111224444554444 566677777655543
No 495
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=35.11 E-value=1.3e+02 Score=24.08 Aligned_cols=97 Identities=12% Similarity=0.036 Sum_probs=51.6
Q ss_pred eEEecchHHHH--HHHHHhcCCCCEEEEcC-CCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCC-CceEEEEecC
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGD-DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESP 148 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~~viv~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~~ 148 (265)
.+++++|+..+ .++..+.+.|..|++.. ..-......+.......+++++..|+.|.+.+.+++.. ++.+|+-+..
T Consensus 5 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 84 (345)
T 2z1m_A 5 RALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNLAA 84 (345)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEECCC
Confidence 46666665444 46677777888777543 22111001111221223577777788898888887753 4565554433
Q ss_pred CCCccc-ccc-----------HHHHHHHHHHcC
Q 024619 149 TNPRQQ-ICD-----------IRKIAEMAHAHG 169 (265)
Q Consensus 149 ~np~G~-~~~-----------l~~i~~~a~~~~ 169 (265)
...... ..+ ...+++.|++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~ 117 (345)
T 2z1m_A 85 QSFVGVSFEQPILTAEVDAIGVLRILEALRTVK 117 (345)
T ss_dssp CCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred CcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 221110 111 356777787766
No 496
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=35.01 E-value=37 Score=25.99 Aligned_cols=92 Identities=18% Similarity=0.092 Sum_probs=50.1
Q ss_pred eEEecchHHHH--HHHHHhcCCCC--EEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcCCCceEEEEecC
Q 024619 73 ALCFTSGMAAL--AAVTHLLGTGE--EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (265)
Q Consensus 73 ~i~~~~g~~al--~~~~~~~~~g~--~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~i~~~~~ 148 (265)
.+++++|+..+ .++..+.+.|. +|++..-.-.... .. ...++.++..|+.|.+++.+.+. +..+|+-+..
T Consensus 20 ~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~----~~-~~~~~~~~~~D~~d~~~~~~~~~-~~d~vi~~ag 93 (242)
T 2bka_A 20 SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD----EE-AYKNVNQEVVDFEKLDDYASAFQ-GHDVGFCCLG 93 (242)
T ss_dssp EEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC----SG-GGGGCEEEECCGGGGGGGGGGGS-SCSEEEECCC
T ss_pred eEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcc----cc-ccCCceEEecCcCCHHHHHHHhc-CCCEEEECCC
Confidence 56666665554 46677777787 7765322111110 10 11356777778888888888775 4565554433
Q ss_pred CCCccc---------cccHHHHHHHHHHcCC
Q 024619 149 TNPRQQ---------ICDIRKIAEMAHAHGA 170 (265)
Q Consensus 149 ~np~G~---------~~~l~~i~~~a~~~~~ 170 (265)
....+. +.-...+++.+++.+.
T Consensus 94 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 124 (242)
T 2bka_A 94 TTRGKAGAEGFVRVDRDYVLKSAELAKAGGC 124 (242)
T ss_dssp CCHHHHHHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred cccccCCcccceeeeHHHHHHHHHHHHHCCC
Confidence 221110 0113567778888764
No 497
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=35.00 E-value=1.5e+02 Score=22.84 Aligned_cols=71 Identities=14% Similarity=0.129 Sum_probs=41.2
Q ss_pred ceEEecchHHHH--HHHHHhcCCCCEEEEcCCCCCChHHHHHhhcCCCCeEEEeecCCCHHHHHhhcC------CCceEE
Q 024619 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (265)
Q Consensus 72 ~~i~~~~g~~al--~~~~~~~~~g~~viv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~------~~~~~i 143 (265)
..+++++|+..+ .+...+.+.|..|++.+-.-.. ...... .. . .+..+|+.|.+++++.+. .+..++
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~-~~--~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 81 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEA-IG--G-AFFQVDLEDERERVRFVEEAAYALGRVDVL 81 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHH-HT--C-EEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHH-hh--C-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 356777777666 4667788889887764322222 222212 12 3 667778888887776654 245555
Q ss_pred EEec
Q 024619 144 WVES 147 (265)
Q Consensus 144 ~~~~ 147 (265)
+-+.
T Consensus 82 v~~A 85 (256)
T 2d1y_A 82 VNNA 85 (256)
T ss_dssp EECC
T ss_pred EECC
Confidence 5443
No 498
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=34.95 E-value=69 Score=23.48 Aligned_cols=37 Identities=19% Similarity=0.166 Sum_probs=23.8
Q ss_pred cCCCceEEEEecCCCCccccccHHHHHHHHHHcCCEE--EEeC
Q 024619 136 IGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALL--LVDN 176 (265)
Q Consensus 136 ~~~~~~~i~~~~~~np~G~~~~l~~i~~~a~~~~~~l--i~D~ 176 (265)
+.++.-+|+++. +|...++.++++.+++.|+.+ |.|.
T Consensus 85 ~~~~d~~i~iS~----sG~t~~~~~~~~~ak~~g~~vi~IT~~ 123 (187)
T 3sho_A 85 LRPTDLMIGVSV----WRYLRDTVAALAGAAERGVPTMALTDS 123 (187)
T ss_dssp CCTTEEEEEECC----SSCCHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 344444444332 567778888999999998754 4554
No 499
>3hvm_A Agmatine deiminase; hydrolase; 2.10A {Helicobacter pylori} SCOP: d.126.1.6 PDB: 2cmu_A
Probab=34.89 E-value=26 Score=29.24 Aligned_cols=73 Identities=12% Similarity=0.131 Sum_probs=47.6
Q ss_pred hHHHHHHHHHhHhCCCceEEecch------HHHH-HHHHHhcCCCCEEEE--cCCCCCChHH------HHHhhcCCCC--
Q 024619 56 TRDALESLLAKLDKADRALCFTSG------MAAL-AAVTHLLGTGEEIVA--GDDLYGGTDR------LLSRVTPKTG-- 118 (265)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~g------~~al-~~~~~~~~~g~~viv--~~~~~~~~~~------~~~~~~~~~g-- 118 (265)
.++++++.|++++|.+.+|-+..| +.+. ..+..|+.||..++. +++..+.|.. .++......|
T Consensus 169 sk~eiE~~L~~~LGv~kviWL~~G~l~~DdTdgHID~larFv~p~~v~~~~~~d~~d~~y~~~~~~~~~L~~~~da~Gr~ 248 (330)
T 3hvm_A 169 NQNGIETMLKKELGAKQVLWYSYGYLKGDDTDSHTDTLARFLDKDTIVYSACEDKNDEHYTALKKMQEELKTFKKLDKTP 248 (330)
T ss_dssp CHHHHHHHHHHHHCCSEEEEECCCCCTTCCSSCCGGGTEEEEETTEEEEEECCCTTSTTHHHHHHHHHHHHHCBCTTSCB
T ss_pred CHHHHHHHHHHHhCCCEEEEECCCCcCCCCCCccchheeEecCCCEEEEEcCCCCCCccHHHHHHHHHHHHhhhhccCCc
Confidence 499999999999999999999877 3332 467778888765543 4565555531 1222222334
Q ss_pred eEEEeecCCC
Q 024619 119 VVVKRVNTCD 128 (265)
Q Consensus 119 ~~~~~~~~~d 128 (265)
.+++.+|.++
T Consensus 249 ~~i~~lp~P~ 258 (330)
T 3hvm_A 249 YKLIPLEIPK 258 (330)
T ss_dssp CEEEEEECCS
T ss_pred eEEEEeCCCC
Confidence 6677776653
No 500
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=34.88 E-value=29 Score=28.19 Aligned_cols=23 Identities=26% Similarity=0.385 Sum_probs=16.9
Q ss_pred ccccHHHHHHHHHHcCCEEEEeC
Q 024619 154 QICDIRKIAEMAHAHGALLLVDN 176 (265)
Q Consensus 154 ~~~~l~~i~~~a~~~~~~li~D~ 176 (265)
....++++++.|+++|+.+|+|-
T Consensus 78 ~l~~ld~~v~~a~~~Gl~vild~ 100 (306)
T 2cks_A 78 FTDRMHQLIDMATARGLYVIVDW 100 (306)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEe
Confidence 33456778888888888888874
Done!