Query 024620
Match_columns 265
No_of_seqs 132 out of 444
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 11:27:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024620.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024620hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uzd_A 14-3-3 protein gamma; s 100.0 2.2E-97 8E-102 664.4 25.3 239 11-252 3-243 (248)
2 3iqu_A 14-3-3 protein sigma; s 100.0 2.8E-96 1E-100 653.5 23.5 231 10-243 6-236 (236)
3 3ubw_A 14-3-3E, 14-3-3 protein 100.0 8.4E-96 3E-100 656.9 25.0 232 11-245 30-261 (261)
4 1o9d_A 14-3-3-like protein C; 100.0 2.2E-95 7E-100 656.3 24.1 253 8-261 4-256 (260)
5 2br9_A 14-3-3E, 14-3-3 protein 100.0 1.5E-93 5E-98 636.8 24.8 231 11-244 4-234 (234)
6 2npm_A 14-3-3 domain containin 100.0 7.7E-92 2.6E-96 632.8 24.4 234 10-245 26-260 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 9.6E-90 3.3E-94 619.1 15.8 227 11-248 28-261 (268)
8 2o8p_A 14-3-3 domain containin 100.0 1.6E-81 5.6E-86 554.7 20.4 215 11-240 2-226 (227)
9 3edt_B KLC 2, kinesin light ch 94.0 0.64 2.2E-05 37.8 11.3 58 157-215 144-201 (283)
10 3vtx_A MAMA; tetratricopeptide 93.6 2 6.8E-05 33.3 17.1 163 13-211 6-169 (184)
11 3nf1_A KLC 1, kinesin light ch 93.5 2.7 9.4E-05 34.7 19.1 58 157-215 170-227 (311)
12 4i17_A Hypothetical protein; T 92.5 3.1 0.0001 33.5 13.2 60 13-76 8-67 (228)
13 3qwp_A SET and MYND domain-con 91.7 1.2 4.1E-05 41.8 10.9 64 157-224 346-409 (429)
14 3n71_A Histone lysine methyltr 91.4 1 3.6E-05 43.1 10.3 100 102-215 326-425 (490)
15 3u4t_A TPR repeat-containing p 90.2 6.5 0.00022 31.9 14.4 52 158-211 197-249 (272)
16 3qww_A SET and MYND domain-con 90.0 1.6 5.3E-05 41.2 9.9 58 157-215 315-372 (433)
17 3hym_B Cell division cycle pro 89.4 8.3 0.00028 32.0 14.2 45 157-210 253-297 (330)
18 3n71_A Histone lysine methyltr 89.3 1.8 6.1E-05 41.4 9.9 59 157-216 326-384 (490)
19 3qww_A SET and MYND domain-con 89.2 0.81 2.8E-05 43.1 7.3 64 157-224 357-420 (433)
20 4g1t_A Interferon-induced prot 89.1 9.1 0.00031 34.1 14.1 49 157-210 351-399 (472)
21 3fp2_A TPR repeat-containing p 88.4 14 0.00047 33.3 16.6 49 156-213 444-492 (537)
22 3edt_B KLC 2, kinesin light ch 88.3 0.89 3E-05 37.0 6.1 56 157-213 102-157 (283)
23 3ulq_A Response regulator aspa 88.2 4.5 0.00015 35.5 11.2 72 128-213 101-173 (383)
24 1fch_A Peroxisomal targeting s 87.2 13 0.00044 31.6 14.0 60 12-76 98-157 (368)
25 3u3w_A Transcriptional activat 87.1 13 0.00044 31.4 18.2 57 157-215 172-228 (293)
26 3q15_A PSP28, response regulat 86.2 3 0.0001 36.7 8.8 74 128-214 99-172 (378)
27 4a1s_A PINS, partner of inscut 85.5 17 0.0006 31.4 21.4 189 13-214 49-254 (411)
28 4gcn_A Protein STI-1; structur 85.3 2.4 8.3E-05 31.7 6.8 47 157-212 25-71 (127)
29 3qwp_A SET and MYND domain-con 85.2 2.3 8E-05 39.7 7.9 58 157-215 304-361 (429)
30 4abn_A Tetratricopeptide repea 83.0 29 0.00099 32.0 16.3 174 12-211 102-286 (474)
31 2gw1_A Mitochondrial precursor 82.6 26 0.00088 31.1 15.4 55 156-211 205-265 (514)
32 3rkv_A Putative peptidylprolyl 79.1 3 0.0001 31.9 5.3 54 157-211 28-91 (162)
33 2pl2_A Hypothetical conserved 79.1 23 0.0008 28.4 11.9 44 13-60 6-49 (217)
34 3ieg_A DNAJ homolog subfamily 78.4 28 0.00095 28.9 17.0 46 157-211 289-334 (359)
35 3nf1_A KLC 1, kinesin light ch 77.5 4.4 0.00015 33.4 6.1 57 157-214 128-184 (311)
36 2q7f_A YRRB protein; TPR, prot 77.4 24 0.00082 27.7 16.2 60 12-76 57-116 (243)
37 2xpi_A Anaphase-promoting comp 76.8 45 0.0015 30.5 17.9 46 157-211 533-578 (597)
38 4gco_A Protein STI-1; structur 76.7 7.5 0.00026 29.0 6.8 46 157-211 30-75 (126)
39 3ro2_A PINS homolog, G-protein 76.4 29 0.001 28.2 21.8 189 13-214 6-214 (338)
40 2y4t_A DNAJ homolog subfamily 76.3 39 0.0013 29.5 14.5 46 157-211 312-357 (450)
41 3sf4_A G-protein-signaling mod 76.0 36 0.0012 28.9 21.9 191 11-214 8-218 (406)
42 3ro3_A PINS homolog, G-protein 75.6 19 0.00067 25.7 13.1 54 157-213 106-159 (164)
43 1elr_A TPR2A-domain of HOP; HO 75.6 17 0.0006 25.2 8.4 53 157-211 55-107 (131)
44 3ro3_A PINS homolog, G-protein 75.6 9.6 0.00033 27.5 7.0 55 157-214 26-80 (164)
45 4eqf_A PEX5-related protein; a 75.2 38 0.0013 28.8 16.8 59 13-76 66-124 (365)
46 2y4t_A DNAJ homolog subfamily 75.0 42 0.0014 29.3 15.6 174 16-211 147-323 (450)
47 3uq3_A Heat shock protein STI1 75.0 29 0.00098 27.4 13.9 30 13-43 80-109 (258)
48 3ro2_A PINS homolog, G-protein 74.4 33 0.0011 27.8 16.9 55 157-214 200-254 (338)
49 2qfc_A PLCR protein; TPR, HTH, 74.4 8.1 0.00028 32.7 7.1 55 157-213 172-226 (293)
50 2gw1_A Mitochondrial precursor 74.2 46 0.0016 29.4 15.2 172 13-211 305-477 (514)
51 4b4t_Q 26S proteasome regulato 73.2 46 0.0016 29.0 18.2 180 15-215 58-248 (434)
52 2xev_A YBGF; tetratricopeptide 71.8 17 0.00059 25.7 7.5 71 157-239 56-126 (129)
53 3q15_A PSP28, response regulat 71.1 51 0.0018 28.6 18.0 52 157-212 239-290 (378)
54 4g1t_A Interferon-induced prot 71.0 9 0.00031 34.1 6.9 53 157-210 68-121 (472)
55 4gcn_A Protein STI-1; structur 70.8 14 0.00047 27.3 7.0 52 157-210 59-110 (127)
56 2ho1_A Type 4 fimbrial biogene 70.7 38 0.0013 26.9 14.6 59 13-76 38-96 (252)
57 1xnf_A Lipoprotein NLPI; TPR, 70.3 40 0.0014 26.9 13.4 49 158-211 195-243 (275)
58 2l6j_A TPR repeat-containing p 69.3 15 0.00052 25.1 6.6 45 157-210 21-65 (111)
59 3ieg_A DNAJ homolog subfamily 68.6 49 0.0017 27.3 17.7 167 17-212 125-301 (359)
60 3gw4_A Uncharacterized protein 68.5 16 0.00056 27.9 7.2 55 157-213 83-137 (203)
61 1fch_A Peroxisomal targeting s 68.2 53 0.0018 27.6 18.5 58 13-75 65-122 (368)
62 3lf9_A 4E10_D0_1IS1A_001_C (T1 68.1 29 0.00098 27.2 8.2 48 26-75 11-60 (121)
63 2xpi_A Anaphase-promoting comp 67.9 72 0.0025 29.0 19.2 55 156-212 491-545 (597)
64 3u3w_A Transcriptional activat 67.7 20 0.00068 30.2 8.1 53 157-213 132-185 (293)
65 1na3_A Designed protein CTPR2; 67.6 21 0.0007 23.5 6.8 46 157-211 26-71 (91)
66 3fp2_A TPR repeat-containing p 66.9 70 0.0024 28.5 17.5 54 158-211 213-271 (537)
67 3k9i_A BH0479 protein; putativ 66.8 18 0.00063 25.8 6.8 47 157-212 44-90 (117)
68 3hym_B Cell division cycle pro 66.4 53 0.0018 26.9 17.1 55 157-212 210-265 (330)
69 1hz4_A MALT regulatory protein 66.3 18 0.00063 31.1 7.8 55 157-212 110-164 (373)
70 3ulq_A Response regulator aspa 66.2 65 0.0022 27.8 18.4 176 17-214 108-295 (383)
71 3cv0_A Peroxisome targeting si 65.8 54 0.0018 26.8 16.2 44 13-60 22-65 (327)
72 2kck_A TPR repeat; tetratricop 64.6 24 0.00082 23.7 6.7 46 157-211 23-68 (112)
73 3ma5_A Tetratricopeptide repea 64.5 33 0.0011 23.9 8.1 72 157-243 24-95 (100)
74 4gyw_A UDP-N-acetylglucosamine 64.1 1.2E+02 0.004 30.1 17.2 168 13-217 10-179 (723)
75 3sf4_A G-protein-signaling mod 63.9 67 0.0023 27.2 19.2 26 14-39 49-74 (406)
76 4eqf_A PEX5-related protein; a 63.6 68 0.0023 27.2 16.2 59 12-75 99-157 (365)
77 2pl2_A Hypothetical conserved 63.4 56 0.0019 26.1 18.1 46 12-61 39-84 (217)
78 2dba_A Smooth muscle cell asso 62.9 18 0.00062 26.0 6.1 49 157-211 45-93 (148)
79 2kc7_A BFR218_protein; tetratr 62.5 29 0.00099 23.5 6.9 47 157-211 17-63 (99)
80 3caz_A BAR protein; thermo-aci 62.1 61 0.0021 27.6 9.7 108 18-172 100-210 (294)
81 2xev_A YBGF; tetratricopeptide 60.7 35 0.0012 24.0 7.3 49 157-211 19-67 (129)
82 3sz7_A HSC70 cochaperone (SGT) 60.5 39 0.0013 25.4 7.9 46 157-211 62-107 (164)
83 3qky_A Outer membrane assembly 60.0 68 0.0023 26.0 19.2 66 11-80 14-81 (261)
84 2qfc_A PLCR protein; TPR, HTH, 59.8 75 0.0026 26.4 21.7 188 14-226 77-276 (293)
85 2ifu_A Gamma-SNAP; membrane fu 59.8 79 0.0027 26.7 11.1 51 157-210 172-222 (307)
86 2vq2_A PILW, putative fimbrial 59.7 56 0.0019 24.9 16.0 168 13-212 9-176 (225)
87 3upv_A Heat shock protein STI1 59.1 31 0.001 24.6 6.8 46 157-211 21-66 (126)
88 2q7f_A YRRB protein; TPR, prot 58.6 63 0.0021 25.1 11.7 60 13-77 24-83 (243)
89 4gco_A Protein STI-1; structur 57.9 31 0.0011 25.4 6.8 46 157-211 64-109 (126)
90 4a1s_A PINS, partner of inscut 57.4 91 0.0031 26.7 18.0 26 14-39 88-113 (411)
91 1xi4_A Clathrin heavy chain; a 57.4 39 0.0013 37.2 9.5 22 188-209 1285-1306(1630)
92 2hr2_A Hypothetical protein; a 57.3 35 0.0012 27.6 7.3 53 157-211 28-85 (159)
93 2lni_A Stress-induced-phosphop 57.0 36 0.0012 23.6 6.8 46 157-211 67-112 (133)
94 1zu2_A Mitochondrial import re 55.9 67 0.0023 25.9 8.8 93 137-243 43-142 (158)
95 3q49_B STIP1 homology and U bo 55.6 38 0.0013 24.1 6.8 15 196-210 56-70 (137)
96 1elr_A TPR2A-domain of HOP; HO 55.4 41 0.0014 23.1 6.8 49 157-214 21-69 (131)
97 3k9i_A BH0479 protein; putativ 54.9 15 0.00053 26.2 4.4 50 157-212 7-56 (117)
98 3upv_A Heat shock protein STI1 54.5 41 0.0014 23.8 6.8 48 157-213 55-102 (126)
99 3vtx_A MAMA; tetratricopeptide 54.5 35 0.0012 25.8 6.8 46 157-211 22-67 (184)
100 2ho1_A Type 4 fimbrial biogene 54.1 79 0.0027 24.9 14.2 61 12-77 71-131 (252)
101 2kat_A Uncharacterized protein 53.1 52 0.0018 22.9 7.1 48 157-213 36-83 (115)
102 2xcb_A PCRH, regulatory protei 52.2 67 0.0023 23.5 8.5 48 157-213 69-116 (142)
103 1lyp_A CAP18; lipopolysacchari 51.7 30 0.001 20.3 4.2 27 91-117 4-30 (32)
104 1elw_A TPR1-domain of HOP; HOP 51.5 43 0.0015 22.5 6.2 45 157-210 55-99 (118)
105 2e2e_A Formate-dependent nitri 50.9 76 0.0026 23.8 12.5 46 157-211 98-143 (177)
106 3u4t_A TPR repeat-containing p 50.9 92 0.0032 24.8 12.7 48 157-213 159-209 (272)
107 2vgx_A Chaperone SYCD; alterna 50.9 40 0.0014 25.4 6.5 46 157-211 72-117 (148)
108 4gfq_A Ribosome-recycling fact 50.8 33 0.0011 29.3 6.4 73 46-119 127-199 (209)
109 2vyi_A SGTA protein; chaperone 50.5 54 0.0019 22.3 6.8 16 196-211 59-74 (131)
110 2vyi_A SGTA protein; chaperone 50.2 56 0.0019 22.3 6.8 47 157-212 63-109 (131)
111 1qqe_A Vesicular transport pro 50.0 45 0.0015 28.0 7.3 53 157-212 54-106 (292)
112 2fbn_A 70 kDa peptidylprolyl i 50.0 52 0.0018 25.5 7.2 49 157-211 55-116 (198)
113 2hr2_A Hypothetical protein; a 49.9 30 0.001 28.0 5.7 72 157-240 74-154 (159)
114 1elw_A TPR1-domain of HOP; HOP 49.2 57 0.0019 21.8 6.8 47 157-212 21-67 (118)
115 1a17_A Serine/threonine protei 48.6 54 0.0018 23.8 6.8 46 157-211 64-109 (166)
116 1ihg_A Cyclophilin 40; ppiase 48.4 19 0.00066 32.3 4.8 54 157-211 240-301 (370)
117 2dba_A Smooth muscle cell asso 47.8 58 0.002 23.1 6.7 46 157-211 82-127 (148)
118 3gw4_A Uncharacterized protein 47.7 87 0.003 23.6 14.7 55 157-214 124-178 (203)
119 3bee_A Putative YFRE protein; 47.0 25 0.00085 25.2 4.4 30 13-43 44-73 (93)
120 4ga2_A E3 SUMO-protein ligase 46.9 56 0.0019 24.5 6.8 46 157-211 48-93 (150)
121 3gyz_A Chaperone protein IPGC; 46.4 46 0.0016 25.7 6.3 46 157-211 87-132 (151)
122 3uq3_A Heat shock protein STI1 45.3 1.1E+02 0.0036 23.9 17.2 30 13-43 39-68 (258)
123 1na0_A Designed protein CTPR3; 45.0 68 0.0023 21.6 6.8 46 157-211 26-71 (125)
124 1a17_A Serine/threonine protei 44.8 65 0.0022 23.3 6.7 46 157-211 30-75 (166)
125 1dd5_A Ribosome recycling fact 43.9 52 0.0018 27.5 6.4 73 45-118 102-174 (185)
126 1hh8_A P67PHOX, NCF-2, neutrop 42.5 68 0.0023 24.7 6.8 46 157-211 54-99 (213)
127 1na0_A Designed protein CTPR3; 42.4 76 0.0026 21.3 6.8 46 157-211 60-105 (125)
128 3cv0_A Peroxisome targeting si 42.2 1.4E+02 0.0046 24.2 17.4 31 12-43 55-85 (327)
129 1ise_A Ribosome recycling fact 42.1 55 0.0019 27.4 6.3 73 45-118 102-174 (185)
130 1is1_A Ribosome recycling fact 42.0 57 0.002 27.2 6.4 73 45-118 102-174 (185)
131 2fbn_A 70 kDa peptidylprolyl i 41.9 68 0.0023 24.8 6.7 46 157-211 105-150 (198)
132 1p5q_A FKBP52, FK506-binding p 41.7 47 0.0016 28.9 6.2 54 157-211 164-224 (336)
133 3urz_A Uncharacterized protein 41.7 68 0.0023 25.4 6.8 31 12-43 4-34 (208)
134 2lni_A Stress-induced-phosphop 41.3 38 0.0013 23.5 4.7 46 157-211 33-78 (133)
135 1wqg_A Ribosome recycling fact 40.9 61 0.0021 27.0 6.4 69 45-118 102-174 (185)
136 4ga2_A E3 SUMO-protein ligase 40.7 70 0.0024 23.9 6.4 29 14-43 33-61 (150)
137 3qky_A Outer membrane assembly 40.2 1.4E+02 0.0049 23.9 11.7 63 16-79 152-223 (261)
138 2ooe_A Cleavage stimulation fa 40.1 41 0.0014 30.9 5.8 52 157-217 63-114 (530)
139 2h6f_A Protein farnesyltransfe 39.8 2.1E+02 0.0071 25.6 14.6 59 12-75 97-156 (382)
140 1ge9_A Ribosome recycling fact 39.5 90 0.0031 26.0 7.2 71 45-119 104-174 (184)
141 1kt0_A FKBP51, 51 kDa FK506-bi 39.5 48 0.0016 30.4 6.1 53 157-211 285-345 (457)
142 3as5_A MAMA; tetratricopeptide 38.9 92 0.0032 22.6 6.8 29 14-43 10-38 (186)
143 3as5_A MAMA; tetratricopeptide 38.2 1.1E+02 0.0038 22.1 15.5 32 11-43 41-72 (186)
144 1eh1_A Ribosome recycling fact 38.1 54 0.0019 27.4 5.6 73 45-118 103-175 (185)
145 1wao_1 Serine/threonine protei 37.6 65 0.0022 29.8 6.8 26 185-211 77-102 (477)
146 1w3b_A UDP-N-acetylglucosamine 36.7 2E+02 0.0067 24.4 14.7 30 13-43 68-97 (388)
147 3ma5_A Tetratricopeptide repea 36.4 1E+02 0.0035 21.1 10.4 58 13-75 8-65 (100)
148 2c2l_A CHIP, carboxy terminus 35.2 60 0.0021 27.3 5.7 51 160-214 51-103 (281)
149 3sz7_A HSC70 cochaperone (SGT) 35.1 1.4E+02 0.0046 22.2 11.0 25 15-39 14-38 (164)
150 2vgx_A Chaperone SYCD; alterna 34.2 1.2E+02 0.004 22.7 6.8 46 157-211 38-83 (148)
151 1xnf_A Lipoprotein NLPI; TPR, 34.1 1E+02 0.0035 24.3 6.7 24 187-211 116-139 (275)
152 2v5f_A Prolyl 4-hydroxylase su 32.5 1.3E+02 0.0045 21.1 7.7 53 157-211 22-74 (104)
153 2ond_A Cleavage stimulation fa 32.3 71 0.0024 26.9 5.7 47 156-211 185-231 (308)
154 2kat_A Uncharacterized protein 32.1 1.2E+02 0.0043 20.8 11.5 61 11-76 18-78 (115)
155 1qqe_A Vesicular transport pro 31.9 1.3E+02 0.0044 25.1 7.3 53 157-212 94-147 (292)
156 2wb7_A PT26-6P; extra chromoso 31.4 1.6E+02 0.0056 28.4 8.3 53 143-197 435-488 (526)
157 1hxi_A PEX5, peroxisome target 30.7 1.5E+02 0.005 21.2 6.7 46 157-211 34-79 (121)
158 2fo7_A Synthetic consensus TPR 30.7 1.2E+02 0.0042 20.3 6.2 46 157-211 52-97 (136)
159 1ya0_A SMG-7 transcript varian 30.3 1.1E+02 0.0038 29.1 7.2 68 136-215 158-235 (497)
160 2yhc_A BAMD, UPF0169 lipoprote 29.8 1.6E+02 0.0056 23.2 7.3 49 157-211 21-69 (225)
161 1hh8_A P67PHOX, NCF-2, neutrop 29.3 1E+02 0.0034 23.7 5.7 53 157-210 88-148 (213)
162 2ifu_A Gamma-SNAP; membrane fu 29.2 2.5E+02 0.0086 23.4 15.2 53 157-213 132-185 (307)
163 2yhc_A BAMD, UPF0169 lipoprote 29.1 2.1E+02 0.0072 22.5 18.0 64 13-78 5-68 (225)
164 3q49_B STIP1 homology and U bo 28.6 1.5E+02 0.0051 20.7 9.5 50 157-215 60-109 (137)
165 3rkv_A Putative peptidylprolyl 28.6 1.8E+02 0.006 21.4 12.1 70 157-243 80-149 (162)
166 2r17_C Vacuolar protein sortin 28.5 28 0.00097 31.3 2.5 39 157-195 212-251 (298)
167 2e2e_A Formate-dependent nitri 27.5 1.3E+02 0.0044 22.4 6.0 47 157-211 61-109 (177)
168 2crb_A Nuclear receptor bindin 26.7 2E+02 0.0069 21.5 8.0 36 17-66 17-55 (97)
169 2h6f_A Protein farnesyltransfe 26.6 3.4E+02 0.012 24.1 13.8 49 13-65 201-249 (382)
170 1p5q_A FKBP52, FK506-binding p 26.3 1.4E+02 0.005 25.7 6.8 46 157-211 213-258 (336)
171 2kck_A TPR repeat; tetratricop 25.9 1.4E+02 0.0049 19.5 8.1 24 16-39 10-33 (112)
172 1w3b_A UDP-N-acetylglucosamine 25.8 3E+02 0.01 23.2 14.7 46 12-61 33-78 (388)
173 3iyk_A VP5; icosahedral virus; 24.8 2.9E+02 0.01 26.6 8.8 73 26-101 121-199 (526)
174 2r5s_A Uncharacterized protein 24.6 2.2E+02 0.0076 21.3 7.0 31 12-43 108-138 (176)
175 2kc7_A BFR218_protein; tetratr 24.3 1.1E+02 0.0038 20.3 4.6 23 17-39 5-27 (99)
176 4gyw_A UDP-N-acetylglucosamine 24.1 1.4E+02 0.0047 29.7 6.8 46 157-211 94-139 (723)
177 2if4_A ATFKBP42; FKBP-like, al 24.0 63 0.0021 28.2 3.9 49 157-211 196-258 (338)
178 2l6j_A TPR repeat-containing p 23.9 1E+02 0.0036 20.5 4.4 25 15-39 41-65 (111)
179 3gyz_A Chaperone protein IPGC; 23.5 2.4E+02 0.0084 21.4 9.6 57 13-74 37-93 (151)
180 2fo7_A Synthetic consensus TPR 23.1 1.7E+02 0.0059 19.5 6.2 28 15-43 4-31 (136)
181 4i17_A Hypothetical protein; T 23.1 2.6E+02 0.009 21.6 12.4 60 12-76 42-101 (228)
182 2wh5_A Acyl-COA-binding domain 21.9 1.2E+02 0.0042 22.8 4.6 37 26-64 10-46 (106)
183 2vsy_A XCC0866; transferase, g 21.9 4.6E+02 0.016 23.9 14.0 31 12-43 23-53 (568)
184 4etr_A Putative uncharacterize 20.9 3E+02 0.01 21.4 7.5 75 148-224 39-127 (153)
185 1hxi_A PEX5, peroxisome target 20.4 2.4E+02 0.0081 20.0 8.2 59 13-76 18-76 (121)
186 2g0u_A Type III secretion syst 20.4 73 0.0025 23.7 2.9 60 126-192 4-67 (92)
187 2xcb_A PCRH, regulatory protei 20.1 2.5E+02 0.0085 20.2 10.3 29 13-42 19-47 (142)
No 1
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=2.2e-97 Score=664.36 Aligned_cols=239 Identities=64% Similarity=0.988 Sum_probs=223.6
Q ss_pred ChHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhh
Q 024620 11 PREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHV 90 (265)
Q Consensus 11 ~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~~ 90 (265)
+|+++||+||||+||||||||+.+||+|+ +++ ++||.||||||||||||+||+||+|||+|+++||+++.+|++.++
T Consensus 3 ~re~lv~~AklaeqaeRyddM~~~Mk~v~-~~~--~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~~ 79 (248)
T 3uzd_A 3 DREQLVQKARLAEQAERYDDMAAAMKNVT-ELN--EPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKI 79 (248)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHH-TTC--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-H
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHH-hcC--CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHHH
Confidence 79999999999999999999999999999 888 999999999999999999999999999999999999878888999
Q ss_pred HHHHHHHHHHHHHHHHHhHhHHHHhhhccCCCCCCC--chhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHHHHHHH
Q 024620 91 STIRDYRSKIETELSSICDGILKLLDSRLIPCASSG--DSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQD 168 (265)
Q Consensus 91 ~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~--eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~ 168 (265)
+.+++||++|++||..+|++||++||++|||.++++ ++||||+|||||||||+|||..|++|+.+++.|+++|++|++
T Consensus 80 ~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~ 159 (248)
T 3uzd_A 80 EMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHE 159 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHhhHhhhhcCCCC
Q 024620 169 IANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQD 248 (265)
Q Consensus 169 la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNL~lW~~e~~~ 248 (265)
+|+.+||||||||||||||||||||||+|+|++||.+|++|||+||++||+|+|++|+|||+||||||||||+|+++.++
T Consensus 160 iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~~~ 239 (248)
T 3uzd_A 160 ISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQD 239 (248)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccCcc
Confidence 99989999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CChh
Q 024620 249 DGAD 252 (265)
Q Consensus 249 ~~~~ 252 (265)
+++.
T Consensus 240 ~~~~ 243 (248)
T 3uzd_A 240 DDGG 243 (248)
T ss_dssp ----
T ss_pred cccc
Confidence 7633
No 2
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=2.8e-96 Score=653.51 Aligned_cols=231 Identities=61% Similarity=0.949 Sum_probs=227.4
Q ss_pred CChHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchh
Q 024620 10 SPREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDH 89 (265)
Q Consensus 10 ~~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~ 89 (265)
.+|+++||+|||||||||||||+++||+|+ +++ ++||.||||||||||||+||+||+|||+|+++||+++.+|++.+
T Consensus 6 ~~re~~v~~AklaeqaeRyddM~~~mk~v~-~~~--~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~ 82 (236)
T 3iqu_A 6 MERASLIQKAKLAEQAERYEDMAAFMKGAV-EKG--EELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEK 82 (236)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HTC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCC
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHH-hcC--CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHH
Confidence 389999999999999999999999999999 888 99999999999999999999999999999999999988888889
Q ss_pred hHHHHHHHHHHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHHHHHHHH
Q 024620 90 VSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDI 169 (265)
Q Consensus 90 ~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~l 169 (265)
++.+++||++|++||..+|++||++||++|||.++++|+||||+|||||||||+|||..|++|+++++.|+++|++|+++
T Consensus 83 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~i 162 (236)
T 3iqu_A 83 GPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDI 162 (236)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHhhHhhhh
Q 024620 170 ANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWT 243 (265)
Q Consensus 170 a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNL~lW~ 243 (265)
|+.+||||||||||||||||||||||+|+|++||.+|++|||+||++||+|+|++|+|||+||||||||||+||
T Consensus 163 A~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWt 236 (236)
T 3iqu_A 163 SKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT 236 (236)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHhccC
Confidence 99899999999999999999999999999999999999999999999999999999999999999999999997
No 3
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=8.4e-96 Score=656.90 Aligned_cols=232 Identities=78% Similarity=1.156 Sum_probs=227.4
Q ss_pred ChHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhh
Q 024620 11 PREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHV 90 (265)
Q Consensus 11 ~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~~ 90 (265)
+|++++|+|||||||||||||+++||+|+ +++ ++||.||||||||||||+||+||+|||+|+++|||++.+|++.++
T Consensus 30 ~re~lv~~AKLaeqaeRYddMv~~MK~v~-~~~--~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~~~ 106 (261)
T 3ubw_A 30 DREDLVYQAKLAEQAERYDEMVESMKKVA-GMD--VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKL 106 (261)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHH-TTC--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHH
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHH-hcC--CcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHHHH
Confidence 79999999999999999999999999999 888 999999999999999999999999999999999999888899999
Q ss_pred HHHHHHHHHHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHHHHHHHHH
Q 024620 91 STIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIA 170 (265)
Q Consensus 91 ~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~la 170 (265)
+.+++||+||++||..+|++||++||++|||.++++|+||||+|||||||||+|||..|++|+++++.|+++|++|+++|
T Consensus 107 ~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~iA 186 (261)
T 3ubw_A 107 KMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIA 186 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHhhHhhhhcC
Q 024620 171 NAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 245 (265)
Q Consensus 171 ~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNL~lW~~e 245 (265)
+.+||||||||||||||||||||||+|+|++||.+||+|||+||++||+|+|++|+|||+||||||||||+|+++
T Consensus 187 ~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDstlImQLLRDNLtlWts~ 261 (261)
T 3ubw_A 187 MTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 261 (261)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC--
T ss_pred HhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHHhhcCC
Confidence 989999999999999999999999999999999999999999999999999999999999999999999999974
No 4
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=2.2e-95 Score=656.27 Aligned_cols=253 Identities=91% Similarity=1.300 Sum_probs=223.3
Q ss_pred CCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcc
Q 024620 8 TPSPREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNE 87 (265)
Q Consensus 8 m~~~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~ 87 (265)
|+++|++++|+|||++|+||||||+.+||+++ +.+..++||.||||||||||||+||++|+|||+|+++||+++.+|++
T Consensus 4 ~~~~re~~v~~AkLaeqaeRyddm~~~mk~v~-~~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~ 82 (260)
T 1o9d_A 4 APTAREENVYMAKLAEQAERYEEMVEFMEKVS-NSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNE 82 (260)
T ss_dssp -CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHH-HTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCH
T ss_pred ccccHHHHHHHHHHHHHhcCHHHHHHHHHHHH-ccCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcH
Confidence 45679999999999999999999999999999 65322689999999999999999999999999999999999888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHHHHHH
Q 024620 88 DHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQ 167 (265)
Q Consensus 88 ~~~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~ 167 (265)
.+++.|++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|+.+++.|+++|++|+
T Consensus 83 ~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~ 162 (260)
T 1o9d_A 83 EHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQ 162 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHhhHhhhhcCCC
Q 024620 168 DIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ 247 (265)
Q Consensus 168 ~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNL~lW~~e~~ 247 (265)
++|+.+||||||||||||||||||||||+|+|++||.+|++|||+||++||+|+|++|+|+|+||||||||||+|+++.+
T Consensus 163 ~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~EesykDstlImqLLRDNLtlWts~~~ 242 (260)
T 1o9d_A 163 DIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ 242 (260)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC---
T ss_pred HHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHHhhhccC
Confidence 99998999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCChhhhhhhcCCC
Q 024620 248 DDGADEIKEAAKPE 261 (265)
Q Consensus 248 ~~~~~~~~~~~~~~ 261 (265)
+++++.+.+.++|.
T Consensus 243 ~~~~~~~~~~~~~~ 256 (260)
T 1o9d_A 243 DDGADEIKEDPKPD 256 (260)
T ss_dssp --------------
T ss_pred cccccccccccccc
Confidence 88888877776664
No 5
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=1.5e-93 Score=636.76 Aligned_cols=231 Identities=78% Similarity=1.154 Sum_probs=226.7
Q ss_pred ChHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhh
Q 024620 11 PREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHV 90 (265)
Q Consensus 11 ~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~~ 90 (265)
+|++++|+|||++||||||||+.+||+++ +.+ ++||.||||||||||||+||++|+|||+|+++||+++.+|++.++
T Consensus 4 ~re~~v~~AklaeqaeRyddm~~~mk~v~-~~~--~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~~~ 80 (234)
T 2br9_A 4 DREDLVYQAKLAEQAERYDEMVESMKKVA-GMD--VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKL 80 (234)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHH-TTC--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred hHHHHHHHHHHHHHHhCHHHHHHHHHHHh-ccc--CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchHHH
Confidence 69999999999999999999999999999 888 999999999999999999999999999999999999888888899
Q ss_pred HHHHHHHHHHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHHHHHHHHH
Q 024620 91 STIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIA 170 (265)
Q Consensus 91 ~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~la 170 (265)
+.+++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|+++++.|+++|++|+++|
T Consensus 81 ~~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA 160 (234)
T 2br9_A 81 KMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIA 160 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHhhHhhhhc
Q 024620 171 NAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTS 244 (265)
Q Consensus 171 ~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNL~lW~~ 244 (265)
+.+||||||+|||||||||||||||+|+|++||.+|++|||+|++++|+|+|++|+|+|+||||||||||+|++
T Consensus 161 ~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDstlImqLLrDNLtlWts 234 (234)
T 2br9_A 161 MTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 234 (234)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-
T ss_pred HccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHhhcC
Confidence 98999999999999999999999999999999999999999999999999999999999999999999999985
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=7.7e-92 Score=632.80 Aligned_cols=234 Identities=66% Similarity=1.028 Sum_probs=224.7
Q ss_pred CChHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC-CCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcch
Q 024620 10 SPREENVYMAKLAEQAERYEEMVEFMEKVSASVE-SSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNED 88 (265)
Q Consensus 10 ~~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~-~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~ 88 (265)
++|++++|+|||++|+||||||+.+||+++ +.+ ..++||.||||||||||||+||++|+|||+|+++||+++.+|++.
T Consensus 26 ~~re~~v~~AkLaeqaeRyddmv~~mk~v~-~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~ 104 (260)
T 2npm_A 26 NARESNVYMAKLAEQAERYDEMAKYMKDVV-EARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAED 104 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHH-hccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHH
Confidence 359999999999999999999999999999 642 015899999999999999999999999999999999998888888
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHHHHHHH
Q 024620 89 HVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQD 168 (265)
Q Consensus 89 ~~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~ 168 (265)
+++.|++||+||++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 105 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 184 (260)
T 2npm_A 105 ASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATV 184 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHHHHHHHHHHHhhHhhhhcC
Q 024620 169 IANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 245 (265)
Q Consensus 169 la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNL~lW~~e 245 (265)
+| .+||||||||||||||||||||||+|++++||.+|++|||+||++||+|+|++|+|+|+||||||||||+|+++
T Consensus 185 iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDstlImqLLRDNLtlWts~ 260 (260)
T 2npm_A 185 VA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTAD 260 (260)
T ss_dssp HH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHHHHHHHHHHHHHHHTC-
T ss_pred HH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHHhccC
Confidence 99 89999999999999999999999999999999999999999999999999999999999999999999999974
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=9.6e-90 Score=619.08 Aligned_cols=227 Identities=23% Similarity=0.454 Sum_probs=196.5
Q ss_pred ChHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhh-hhcCc-ch
Q 024620 11 PREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKE-ESRGN-ED 88 (265)
Q Consensus 11 ~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~-~~~~~-~~ 88 (265)
+|++++|+|||||||||||||+++| + +++ ++||.||||||||||||+||+||+|||+|+++|||+ +.+|+ +.
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~-e~~--~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~ 101 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---T-ESS--DFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNE 101 (268)
T ss_dssp ------------------CHHHHHH---T-C-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---H-hcC--CcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHH
Confidence 5999999999999999999999999 6 778 999999999999999999999999999999999999 67787 88
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHHHHHHH
Q 024620 89 HVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQD 168 (265)
Q Consensus 89 ~~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~ 168 (265)
+++.+++||++|++||..+|++||++||++|||.++++ ++|||+|||||||||+|||..|++|+++++.|+++|++|++
T Consensus 102 ~~~~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~e 180 (268)
T 3efz_A 102 FIQVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQ 180 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHhcC--CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH---HHHhhcccCccchHHHHHHHHHHHhhHhhhh
Q 024620 169 IANAEL--APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE---AIAELDTLGEESYKDSTLIMQLLRDNLTLWT 243 (265)
Q Consensus 169 la~~~L--~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~---Ai~~ld~l~ee~y~ds~~IlqLLrDNL~lW~ 243 (265)
+|+++| |||||||||||||||||||||+|+|++||.+||+|||+ ||++||+|+|++ |+||||||||||+|+
T Consensus 181 iA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~ees----tlImQLLRDNLtlWt 256 (268)
T 3efz_A 181 RERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFSENT----EKLLKILRDNVSQWE 256 (268)
T ss_dssp HHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCCHHH----HHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCChHH----HHHHHHHHHHHHHhh
Confidence 999899 99999999999999999999999999999999999999 999999999987 999999999999999
Q ss_pred cCCCC
Q 024620 244 SDMQD 248 (265)
Q Consensus 244 ~e~~~ 248 (265)
++.++
T Consensus 257 sd~~~ 261 (268)
T 3efz_A 257 QGCSG 261 (268)
T ss_dssp TTCCT
T ss_pred ccccc
Confidence 98665
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=1.6e-81 Score=554.65 Aligned_cols=215 Identities=20% Similarity=0.259 Sum_probs=198.6
Q ss_pred ChHHHH---HHHHHHHHhcCHHHHHHHHHHHHhh----cCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhh
Q 024620 11 PREENV---YMAKLAEQAERYEEMVEFMEKVSAS----VESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEES 83 (265)
Q Consensus 11 ~re~li---~~Aklaeq~eRy~Dm~~~mk~~i~~----~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~ 83 (265)
+|++++ |+||||+||||||||+++||+++ + .+ ++||.||||||||||||+||++|+|||+|+++||++
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~-~~~~~~~--~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke-- 76 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLI-YLSEFEN--SEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ-- 76 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH-HhhhccC--CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--
Confidence 589999 99999999999999999999999 7 78 999999999999999999999999999999999998
Q ss_pred cCcchhhHHHHHHHHHHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHH
Q 024620 84 RGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAY 163 (265)
Q Consensus 84 ~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY 163 (265)
+|++.+++.+++||++|++||..+|++|+++||++|||.+ |+||||+|||||||||+|||..|+ ++.|+++|
T Consensus 77 k~~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY 148 (227)
T 2o8p_A 77 LNNDELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIH 148 (227)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHH
Confidence 6788899999999999999999999999999999999998 999999999999999999999998 88999999
Q ss_pred HHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH---HHhhcccCccchHHHHHHHHHHHhhHh
Q 024620 164 KAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA---IAELDTLGEESYKDSTLIMQLLRDNLT 240 (265)
Q Consensus 164 ~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A---i~~ld~l~ee~y~ds~~IlqLLrDNL~ 240 (265)
++|+++|+++||||||+||||+||||||||||+|+|++||.+|++||+.+ +..-+.. +.+.+.|+|+|+|||||.
T Consensus 149 ~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E~m--~~~~~~~~~~q~~~d~~~ 226 (227)
T 2o8p_A 149 QDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQENM--DRKAQITVYLQGIKDYIE 226 (227)
T ss_dssp HHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHC----
T ss_pred HHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccccc--hhHHHHHHHHHHHHHhcc
Confidence 99999999899999999999999999999999999999999999999966 3332322 348889999999999984
No 9
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=94.01 E-value=0.64 Score=37.85 Aligned_cols=58 Identities=22% Similarity=0.232 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA 215 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 215 (265)
+.|...|++|+.+.+....+.+|.......+.+..++. +|+.++|+...++++..+-.
T Consensus 144 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 144 EEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 57999999999998888888899888888888877776 69999999999998876543
No 10
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=93.60 E-value=2 Score=33.31 Aligned_cols=163 Identities=13% Similarity=0.094 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhhHH
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVST 92 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~~~~ 92 (265)
.-...++.+..+-|+|++++.++++++ +.+ |. +.+=...+..+|-. .+....+...+.......... .......
T Consensus 6 ~iy~~lG~~~~~~g~~~~A~~~~~~al-~~~--p~-~~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~~~-~~~~~~~ 79 (184)
T 3vtx_A 6 TIYMDIGDKKRTKGDFDGAIRAYKKVL-KAD--PN-NVETLLKLGKTYMD-IGLPNDAIESLKKFVVLDTTS-AEAYYIL 79 (184)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHH-HHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCCC-HHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH-HhC--CC-CHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCchh-HHHHHHH
Confidence 445678899999999999999999999 765 54 45555556666543 244444544444322221100 0000000
Q ss_pred HHHHHH-HHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHHHHHHHHHH
Q 024620 93 IRDYRS-KIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIAN 171 (265)
Q Consensus 93 i~~yr~-kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~la~ 171 (265)
..-+.. .-.++-...+...+.+ -|.. .. .+...|..|.-+ |+ -+.|.+.|++++++
T Consensus 80 ~~~~~~~~~~~~a~~~~~~a~~~-----~~~~----~~--~~~~lg~~~~~~-----g~-----~~~A~~~~~~~l~~-- 136 (184)
T 3vtx_A 80 GSANFMIDEKQAAIDALQRAIAL-----NTVY----AD--AYYKLGLVYDSM-----GE-----HDKAIEAYEKTISI-- 136 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH-----CTTC----HH--HHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH--
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh-----Cccc----hH--HHHHHHHHHHHh-----CC-----chhHHHHHHHHHHh--
Confidence 000000 0011122222233222 2221 11 222334443211 11 25688999998864
Q ss_pred hcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 172 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 172 ~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
.|.+| ....|.+..|+ -+|+.++|+..-++|++
T Consensus 137 ---~p~~~---~~~~~lg~~~~-~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 137 ---KPGFI---RAYQSIGLAYE-GKGLRDEAVKYFKKALE 169 (184)
T ss_dssp ---CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred ---cchhh---hHHHHHHHHHH-HCCCHHHHHHHHHHHHh
Confidence 44554 34445555555 48999999887776654
No 11
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=93.52 E-value=2.7 Score=34.69 Aligned_cols=58 Identities=22% Similarity=0.239 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA 215 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 215 (265)
+.|...|++|++++.....+.+|.......+.+..|+. .|+.++|+...++++..+-.
T Consensus 170 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 170 EEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 57999999999999887788888888888888777766 79999999999999876543
No 12
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=92.54 E-value=3.1 Score=33.51 Aligned_cols=60 Identities=12% Similarity=-0.008 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISS 76 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~ 76 (265)
+.+..++.+.-+.|+|++++.++.+++ ..+ +.-+..-...+..+|-. .+....|.+.+..
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al-~~~--~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~ 67 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYL-KLT--NNQDSVTAYNCGVCADN-IKKYKEAADYFDI 67 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-HHT--TTCCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHH-hcc--CCCCcHHHHHHHHHHHH-hhcHHHHHHHHHH
Confidence 678889999999999999999999999 665 53444444445555443 3555566665543
No 13
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=91.74 E-value=1.2 Score=41.76 Aligned_cols=64 Identities=19% Similarity=0.122 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccc
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEES 224 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~ 224 (265)
+.|...|++|+.+-+..++|.||.......|.++-|.. .|+.++|..+-++|++--.. .+.+++
T Consensus 346 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~~~---~lG~~H 409 (429)
T 3qwp_A 346 EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIMRV---THGREH 409 (429)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH---HTCTTS
T ss_pred HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHH---hcCCCC
Confidence 56999999999999989999999999999999988777 79999999988888775433 245554
No 14
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=91.40 E-value=1 Score=43.09 Aligned_cols=100 Identities=9% Similarity=0.031 Sum_probs=68.1
Q ss_pred HHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcch
Q 024620 102 TELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIR 181 (265)
Q Consensus 102 ~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~la~~~L~pt~pir 181 (265)
+|-..+|...+.+-...|=|.. + ..+=-+..-|..|+.. | + -+.|...|++|+++-...|+|.||.-
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~H--p-~~a~~~~nLa~~y~~~-----g-~----~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTN--L-YVLRLLSIASEVLSYL-----Q-A----YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTS--H-HHHHHHHHHHHHHHHT-----T-C----HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--H-HHHHHHHHHHHHHHHh-----c-C----HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 3456667777776665543332 1 1111112223333222 1 1 14689999999999999999999999
Q ss_pred HHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024620 182 LGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA 215 (265)
Q Consensus 182 LgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 215 (265)
+....|.++.|+. .|+.++|..+.++|+.---.
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999988886 69999999999888765443
No 15
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=90.19 E-value=6.5 Score=31.94 Aligned_cols=52 Identities=13% Similarity=0.054 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcchH-HHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 158 STLTAYKAAQDIANAELAPTHPIRL-GLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 158 ~A~~aY~~A~~la~~~L~pt~pirL-gLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
.|...|++|+++....-.+. +-.+ ....+.+.+ |...|+.++|+...++++.
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~-~~~~~~~~~~l~~~-~~~~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKY-KDELIEANEYIAYY-YTINRDKVKADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGG-HHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccc-hHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHh
Confidence 47889999999886432222 2223 333444444 4458999999987777664
No 16
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=90.02 E-value=1.6 Score=41.19 Aligned_cols=58 Identities=7% Similarity=0.016 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA 215 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 215 (265)
+.|...|++|+++.++.|.|.||..+...-|.+.-|.. +|+.++|..+.++++.--..
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~ 372 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSK 372 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHH
Confidence 46788999999999889999999999988888777766 79999999999999775544
No 17
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=89.38 E-value=8.3 Score=31.97 Aligned_cols=45 Identities=11% Similarity=0.128 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 210 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 210 (265)
+.|...|++|+++. |.+| ....+.+..++ -+|+.++|+...++++
T Consensus 253 ~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~al 297 (330)
T 3hym_B 253 AEALDYHRQALVLI-----PQNA---STYSAIGYIHS-LMGNFENAVDYFHTAL 297 (330)
T ss_dssp HHHHHHHHHHHHHS-----TTCS---HHHHHHHHHHH-HHTCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhhC-----ccch---HHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 56889999998752 3443 23344455544 4799999888766654
No 18
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=89.29 E-value=1.8 Score=41.42 Aligned_cols=59 Identities=15% Similarity=0.089 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHh
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAE 216 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ 216 (265)
+.|...|++|+++....|.|.||-.+...-|.+..|.. .|+.++|..+.++|++--...
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~ 384 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMKL 384 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHH
Confidence 35777899999999889999999999999999888776 799999999999988765443
No 19
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=89.15 E-value=0.81 Score=43.13 Aligned_cols=64 Identities=13% Similarity=0.052 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccc
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEES 224 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~ 224 (265)
+.|...|++|+++-+..++|.||--.....|.++-|+. .|+.++|..+-++|++--... +.+++
T Consensus 357 ~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~~~~---lG~~H 420 (433)
T 3qww_A 357 EGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMG-LENKAAGEKALKKAIAIMEVA---HGKDH 420 (433)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH---TCTTC
T ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHHH---cCCCC
Confidence 46999999999999999999999999999999888776 799999999888887655443 45544
No 20
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=89.11 E-value=9.1 Score=34.09 Aligned_cols=49 Identities=14% Similarity=0.093 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 210 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 210 (265)
+.|...|++|+++ .|.++..-.+.+++..|++.-.|+.++|+..-++|+
T Consensus 351 ~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 351 EEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 5689999999853 444555556677888887777899999987655544
No 21
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=88.44 E-value=14 Score=33.30 Aligned_cols=49 Identities=12% Similarity=0.143 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024620 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 213 (265)
Q Consensus 156 ~~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 213 (265)
.+.|...|++|+++ .|.+| ....+.+..|+ -+|+.++|+...+++++-.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKL-QMEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HhccHHHHHHHHHHHHHhC
Confidence 35688888888764 45555 34455555555 4799999998887776644
No 22
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=88.26 E-value=0.89 Score=36.98 Aligned_cols=56 Identities=14% Similarity=0.113 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 213 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 213 (265)
+.|...|++|+.+.+....|.+|.......|.+..++. +|+.++|+...+++++..
T Consensus 102 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 157 (283)
T 3edt_B 102 KEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEIY 157 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 56899999999999887888899988888888887775 799999999999988764
No 23
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=88.21 E-value=4.5 Score=35.53 Aligned_cols=72 Identities=18% Similarity=0.212 Sum_probs=47.2
Q ss_pred hhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHhh-hHHHHHHHHhCChHHHHHHH
Q 024620 128 SKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLAL-NFSVFYYEILNSPDRACNLA 206 (265)
Q Consensus 128 skVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~la~~~L~pt~pirLgLaL-N~SVF~yEi~~~~~~A~~iA 206 (265)
...+|+-.+|.+|...-. -+.|...|++|+.++.. + | +|...+.++ +.+..|+ .+|+.++|+...
T Consensus 101 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~-~-~~~~~a~~~~~lg~~~~-~~~~~~~A~~~~ 166 (383)
T 3ulq_A 101 LEYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIF-V-K-DRIEKAEFFFKMSESYY-YMKQTYFSMDYA 166 (383)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C-C-CHHHHHHHHHHHHHHHH-HTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhh-C-C-CHHHHHHHHHHHHHHHH-HcCCHHHHHHHH
Confidence 345566667776643322 25689999999998764 3 2 344444444 4455555 489999999988
Q ss_pred HHHHHHH
Q 024620 207 KQAFDEA 213 (265)
Q Consensus 207 k~afd~A 213 (265)
++|++-.
T Consensus 167 ~~al~~~ 173 (383)
T 3ulq_A 167 RQAYEIY 173 (383)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887654
No 24
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=87.24 E-value=13 Score=31.59 Aligned_cols=60 Identities=13% Similarity=0.203 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 024620 12 REENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISS 76 (265)
Q Consensus 12 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~ 76 (265)
-.-+..++.+....|+|++++.++++++ ..+ |. +.+-...+..+|-. .+....+...+..
T Consensus 98 ~~~~~~l~~~~~~~g~~~~A~~~~~~al-~~~--~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 157 (368)
T 1fch_A 98 MEAWQYLGTTQAENEQELLAISALRRCL-ELK--PD-NQTALMALAVSFTN-ESLQRQACEILRD 157 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHH-hcC--CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 3456678888888899999999988888 654 43 44555555555543 3445555555543
No 25
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=87.05 E-value=13 Score=31.41 Aligned_cols=57 Identities=9% Similarity=0.096 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA 215 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 215 (265)
+.|...|++|++++.. ++..+|....+..|.+..|++ +|+.++|+...++|++-+..
T Consensus 172 ~~A~~~~~~al~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 172 KKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHHH-SSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-cccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHH
Confidence 5799999999998864 666677777788899988887 79999999999999876643
No 26
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=86.17 E-value=3 Score=36.74 Aligned_cols=74 Identities=16% Similarity=0.168 Sum_probs=48.9
Q ss_pred hhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHH
Q 024620 128 SKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAK 207 (265)
Q Consensus 128 skVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk 207 (265)
...+|+-.+|.+|...-. -+.|...|++|+.++.. ++ .+|..-....|.+.+|+. +|+.++|+...+
T Consensus 99 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~~-~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~~ 165 (378)
T 3q15_A 99 LKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-VS-DDIEKAEFHFKVAEAYYH-MKQTHVSMYHIL 165 (378)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-CC-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-CC-ChHHHHHHHHHHHHHHHH-cCCcHHHHHHHH
Confidence 445566677776643322 25689999999998764 33 234444445555666554 799999999988
Q ss_pred HHHHHHH
Q 024620 208 QAFDEAI 214 (265)
Q Consensus 208 ~afd~Ai 214 (265)
+|++-.-
T Consensus 166 ~al~~~~ 172 (378)
T 3q15_A 166 QALDIYQ 172 (378)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8876543
No 27
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=85.48 E-value=17 Score=31.44 Aligned_cols=189 Identities=15% Similarity=0.054 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHH----HHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcch
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVE----ERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNED 88 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~e----ERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~ 88 (265)
..+..++....+.|+|++++.++.+++ ... +. +.+ =...+..+|- ..+....+...+....+.....++..
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al-~~~--~~-~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAI-QAG--TE-DLRTLSAIYSQLGNAYF-YLGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-HHC--CS-CHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHH-Hhc--cc-ChhHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccCch
Confidence 456678888889999999999999999 655 43 222 1223333333 23444445544432221111011100
Q ss_pred hh-----HHHHHH-HHHHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhh-------cCchhHHHH
Q 024620 89 HV-----STIRDY-RSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEF-------KTGAERKEA 155 (265)
Q Consensus 89 ~~-----~~i~~y-r~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~-------~~~~~~~~~ 155 (265)
.. .+..-| ...--++-...+...+.+.... .+....+..+...|..|...-.. ....+-...
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~ 198 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEA 198 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHH
Confidence 00 000001 0011123344444555543331 11122333334445555444330 001122234
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024620 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 214 (265)
Q Consensus 156 ~~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 214 (265)
.+.|...|++|++++... +.+|.......+.+..|+ -.|+.++|+...++++.-.-
T Consensus 199 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 254 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYY-LLGDFQAAIEHHQERLRIAR 254 (411)
T ss_dssp HHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHH
Confidence 578899999999988653 223444444445554444 58999999998888876543
No 28
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=85.34 E-value=2.4 Score=31.70 Aligned_cols=47 Identities=17% Similarity=0.292 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 212 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 212 (265)
+.|...|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.-
T Consensus 25 ~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 25 EKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEV 71 (127)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHh
Confidence 5799999999875 45554 345677777776 79999999988888764
No 29
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=85.24 E-value=2.3 Score=39.74 Aligned_cols=58 Identities=12% Similarity=0.008 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA 215 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 215 (265)
+.|...|++++++..+.|.|.||..+...-|.+.-|.. .|+.++|..+.++++.--..
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~ 361 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRI 361 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHH
Confidence 35677788888777778999999999999888777665 79999999999988765544
No 30
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=82.97 E-value=29 Score=31.97 Aligned_cols=174 Identities=17% Similarity=0.117 Sum_probs=91.2
Q ss_pred hHHHHHHHHHHHHhcCH-HHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhh
Q 024620 12 REENVYMAKLAEQAERY-EEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHV 90 (265)
Q Consensus 12 re~li~~Aklaeq~eRy-~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~~ 90 (265)
-.-+..++++....|+| ++++.++++++ +.+ +. ..+-...|..+|-.. +....|...+......... .....
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al-~~~--p~-~~~a~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~--~~~~~ 174 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAV-KLE--PE-LVEAWNQLGEVYWKK-GDVTSAHTCFSGALTHCKN--KVSLQ 174 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHH-HHC--TT-CHHHHHHHHHHHHHH-TCHHHHHHHHHHHHTTCCC--HHHHH
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHH-hhC--CC-CHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCC--HHHHH
Confidence 34566777777778888 88888888887 554 33 345556666665432 4444444444332221110 01111
Q ss_pred HHHHHHHH----------HHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhcCchhHHHHHHHHH
Q 024620 91 STIRDYRS----------KIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTL 160 (265)
Q Consensus 91 ~~i~~yr~----------kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~ 160 (265)
.+..-|.. .=-++-...++..+.+ -|.. ..+ +-..|..|... -|..+. ...-.+.|.
T Consensus 175 ~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~----~~~--~~~lg~~~~~~-~~~~~~-~~g~~~~A~ 241 (474)
T 4abn_A 175 NLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVLD----GRS--WYILGNAYLSL-YFNTGQ-NPKISQQAL 241 (474)
T ss_dssp HHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTC----HHH--HHHHHHHHHHH-HHHTTC-CHHHHHHHH
T ss_pred HHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCCC----HHH--HHHHHHHHHHH-HHhhcc-ccchHHHHH
Confidence 11111111 1123344455555553 2321 222 23345555433 111222 112346799
Q ss_pred HHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 161 TAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 161 ~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
.+|++|+.+ .|.+|-......|.+..|+. +|+.++|+...++|+.
T Consensus 242 ~~~~~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 242 SAYAQAEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHHHHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 999999876 23222555667777777766 7999999887777654
No 31
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=82.58 E-value=26 Score=31.11 Aligned_cols=55 Identities=15% Similarity=0.105 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHhcC--CCCC----cchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 156 AESTLTAYKAAQDIANAEL--APTH----PIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 156 ~~~A~~aY~~A~~la~~~L--~pt~----pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
.+.|...|++++..-...+ .|.+ |.......+.+..++. .|+.++|+...++++.
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~ 265 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIE 265 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 4578888888887543334 4444 5555555666665554 7999999998887764
No 32
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=79.13 E-value=3 Score=31.88 Aligned_cols=54 Identities=17% Similarity=0.271 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHhcC---CCC-------CcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAEL---APT-------HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L---~pt-------~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+..... .|+ +|....+.+|.+..|+. +|+.++|+..+.+|+.
T Consensus 28 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 28 KEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence 568999999999865421 233 56777888888888776 7999999998888754
No 33
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=79.05 E-value=23 Score=28.43 Aligned_cols=44 Identities=11% Similarity=0.150 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHH
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAY 60 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvay 60 (265)
+-+..++.+..+.|+|++.+.++.+++ ..+ |. +.+=...+..+|
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al-~~~--p~-~~~a~~~lg~~~ 49 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERAL-KEN--PQ-DPEALYWLARTQ 49 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-TTS--SS-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH-HhC--CC-CHHHHHHHHHHH
Confidence 445556666666666666666666666 443 32 334444444443
No 34
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=78.40 E-value=28 Score=28.90 Aligned_cols=46 Identities=13% Similarity=0.081 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++++++ .|.+| ....+.+..++ ..|+.++|+...++++.
T Consensus 289 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~g~~~~A~~~~~~a~~ 334 (359)
T 3ieg_A 289 VEAIRICSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYEAAQE 334 (359)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence 5688888888764 34444 34555555554 48999998887776653
No 35
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=77.48 E-value=4.4 Score=33.40 Aligned_cols=57 Identities=14% Similarity=0.086 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 214 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 214 (265)
+.|...|++|+++.....++.+|.......+.+..++. .|+.++|+...+++++...
T Consensus 128 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~ 184 (311)
T 3nf1_A 128 KEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQN-QGKYEEVEYYYQRALEIYQ 184 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHH
Confidence 56899999999998876777788877777777777665 7999999999888887643
No 36
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=77.39 E-value=24 Score=27.68 Aligned_cols=60 Identities=10% Similarity=0.109 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 024620 12 REENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISS 76 (265)
Q Consensus 12 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~ 76 (265)
-.-+..++.+..+.|+|++++.++++++ ... +. +..-...+..+|-. .+....+...+..
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~-~~~--~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~ 116 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKAL-ELD--SS-AATAYYGAGNVYVV-KEMYKEAKDMFEK 116 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH-HcC--Cc-chHHHHHHHHHHHH-hccHHHHHHHHHH
Confidence 3456677888888888888888888887 554 33 33334444444432 3444455555543
No 37
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=76.85 E-value=45 Score=30.47 Aligned_cols=46 Identities=9% Similarity=0.169 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++++++ .|.+| ....+.+.. |...|+.++|....+++++
T Consensus 533 ~~A~~~~~~~~~~-----~p~~~---~~~~~l~~~-~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 533 DAAIDALNQGLLL-----STNDA---NVHTAIALV-YLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp HHHHHHHHHHHHH-----SSCCH---HHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHH-HHHhCCHHHHHHHHHHHHh
Confidence 5688888888765 35555 233333333 4458999999888777665
No 38
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=76.67 E-value=7.5 Score=28.96 Aligned_cols=46 Identities=17% Similarity=0.149 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|.+.|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 5688899999864 44454 445666666665 7999999887777654
No 39
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=76.43 E-value=29 Score=28.19 Aligned_cols=189 Identities=12% Similarity=-0.001 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHH----HHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcch
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEE----RNLLSVAYKNVIGARRASWRIISSIEQKEESRGNED 88 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eE----RnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~ 88 (265)
..+...+......|+|++++.++++++ ... +. +.+. ...+..+|- ..+....+...+..........++..
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al-~~~--~~-~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~ 80 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAV-QVG--TE-DLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQL 80 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-HHC--CS-CHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHH-hhC--cc-cHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhhcccccH
Confidence 456778899999999999999999998 654 43 2221 123333332 22334444444432211111111110
Q ss_pred hh-----HHHHHHH-HHHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhc----------CchhH
Q 024620 89 HV-----STIRDYR-SKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFK----------TGAER 152 (265)
Q Consensus 89 ~~-----~~i~~yr-~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~----------~~~~~ 152 (265)
.. .+..-|. ..--++-...+...+.+.... .+....+..+...|..|...-... ..++-
T Consensus 81 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a 155 (338)
T 3ro2_A 81 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDV 155 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh-----cCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhH
Confidence 00 0101111 111223344445555544332 222333444455666666554411 01122
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024620 153 KEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 214 (265)
Q Consensus 153 ~~~~~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 214 (265)
....+.|...|++|+.++... + .+|.......+.+.. |.-.|+.++|+...++++.-+-
T Consensus 156 ~~~~~~A~~~~~~a~~~~~~~-~-~~~~~~~~~~~l~~~-~~~~~~~~~A~~~~~~a~~~~~ 214 (338)
T 3ro2_A 156 RNALQAAVDLYEENLSLVTAL-G-DRAAQGRAFGNLGNT-HYLLGNFRDAVIAHEQRLLIAK 214 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-T-CHHHHHHHHHHHHHH-HHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHH
Confidence 334577888888888887642 2 233333344444444 4457999999998888876543
No 40
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=76.31 E-value=39 Score=29.50 Aligned_cols=46 Identities=13% Similarity=0.089 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+ .|.+| ....+.+..+. ..|+.++|+...++++.
T Consensus 312 ~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 312 VEAIRVCSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 5678888888764 34444 33344444444 58999999988887764
No 41
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=76.04 E-value=36 Score=28.95 Aligned_cols=191 Identities=14% Similarity=0.027 Sum_probs=96.0
Q ss_pred ChHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHH----HHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCc
Q 024620 11 PREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVE----ERNLLSVAYKNVIGARRASWRIISSIEQKEESRGN 86 (265)
Q Consensus 11 ~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~e----ERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~ 86 (265)
.-..+..++...-..|+|++.+.++.+++ ..+ +. +.. =...+..+|-. .+....+...+.....-....++
T Consensus 8 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al-~~~--~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~ 82 (406)
T 3sf4_A 8 SCLELALEGERLCKSGDCRAGVSFFEAAV-QVG--TE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGD 82 (406)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHC--CS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHH-hcC--cc-cHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccc
Confidence 34566788999999999999999999999 654 43 222 22234444432 23344444443321111110011
Q ss_pred chhh-----HHHHHHH-HHHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhh-------hc---Cch
Q 024620 87 EDHV-----STIRDYR-SKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAE-------FK---TGA 150 (265)
Q Consensus 87 ~~~~-----~~i~~yr-~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE-------~~---~~~ 150 (265)
.... .+..-|. ..=-++-...+...+.+.... .+....+..+...|..|...-. -. ..+
T Consensus 83 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~ 157 (406)
T 3sf4_A 83 QLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPE 157 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhh
Confidence 1000 0000110 011223344445555544332 1112223233334444443333 10 012
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024620 151 ERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 214 (265)
Q Consensus 151 ~~~~~~~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 214 (265)
+-....+.|...|++|+.++.. + +.+|.......|.+..++ -+|+.++|+...++++.-+-
T Consensus 158 ~a~~~~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 218 (406)
T 3sf4_A 158 EVRDALQAAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAK 218 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHH-HHTBHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHH
Confidence 2334467889999999998865 3 234444444455555554 47999999988888876543
No 42
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=75.64 E-value=19 Score=25.73 Aligned_cols=54 Identities=17% Similarity=0.147 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 213 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 213 (265)
+.|...|++|++++.. .. .+|.......+.+..+ .-.|+.++|+...++++.-+
T Consensus 106 ~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 106 EKAIDYHLKHLAIAQE-LK-DRIGEGRACWSLGNAY-TALGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp HHHHHHHHHHHHHHHH-TT-CHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-cc-chHhHHHHHHHHHHHH-HHccCHHHHHHHHHHHHHHH
Confidence 5688999999998864 22 2333333444555544 45799999998888877654
No 43
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=75.61 E-value=17 Score=25.17 Aligned_cols=53 Identities=6% Similarity=-0.001 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+... .++.++.......+.+..++. +|+.++|....++++.
T Consensus 55 ~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 55 NKCRELCEKAIEVGRE-NREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 5688999999988753 445555445566677766665 7999999887666655
No 44
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=75.58 E-value=9.6 Score=27.48 Aligned_cols=55 Identities=16% Similarity=-0.010 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 214 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 214 (265)
+.|...|++|++++... .+|..++.+++.--..|-..|+.++|+...+++++-+-
T Consensus 26 ~~A~~~~~~al~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 80 (164)
T 3ro3_A 26 RDAVIAHEQRLLIAKEF---GDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLAR 80 (164)
T ss_dssp HHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh---CCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 56888999999888641 24445555554444444457999999998888876553
No 45
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=75.24 E-value=38 Score=28.82 Aligned_cols=59 Identities=10% Similarity=0.039 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISS 76 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~ 76 (265)
..++.++....+.|+|++++.++++++ ... |. +.+-...+..+|-. .+....+...+..
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al-~~~--p~-~~~~~~~lg~~~~~-~g~~~~A~~~~~~ 124 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAI-LQD--PG-DAEAWQFLGITQAE-NENEQAAIVALQR 124 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHH-HHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHH-HhC--cC-CHHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 458899999999999999999999999 654 43 45555666666543 3455556655543
No 46
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=75.02 E-value=42 Score=29.27 Aligned_cols=174 Identities=15% Similarity=0.098 Sum_probs=82.6
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhhHHHHH
Q 024620 16 VYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRD 95 (265)
Q Consensus 16 i~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~~~~i~~ 95 (265)
..+|.+..+.|+|++++.++.+++ ... + -+..-...+..+|-. .+....+...+.......... ......+..-
T Consensus 147 ~~~a~~~~~~~~~~~A~~~~~~~~-~~~--~-~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~ 220 (450)
T 2y4t_A 147 RSQALNAFGSGDYTAAIAFLDKIL-EVC--V-WDAELRELRAECFIK-EGEPRKAISDLKAASKLKNDN-TEAFYKISTL 220 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHH-HHC--T-TCHHHHHHHHHHHHH-TTCGGGGHHHHHHHHHHHCSC-HHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHH-HhC--C-CChHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHH
Confidence 344777888999999999999998 654 3 345555566665543 344455555554332221100 0011111111
Q ss_pred HHH-HHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchh--hhhcCchhHHHHHHHHHHHHHHHHHHHHh
Q 024620 96 YRS-KIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYL--AEFKTGAERKEAAESTLTAYKAAQDIANA 172 (265)
Q Consensus 96 yr~-kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYl--aE~~~~~~~~~~~~~A~~aY~~A~~la~~ 172 (265)
|.. .=-++-......++.+ -|.. ......+ ...+..-.++ +.... +..-.+.|...|++++.
T Consensus 221 ~~~~g~~~~A~~~~~~~~~~-----~p~~--~~~~~~~-~~~~~~~~~~~~~~~~~---~~g~~~~A~~~~~~~l~---- 285 (450)
T 2y4t_A 221 YYQLGDHELSLSEVRECLKL-----DQDH--KRCFAHY-KQVKKLNKLIESAEELI---RDGRYTDATSKYESVMK---- 285 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHHH-----CTTC--HHHHHHH-HHHHHHHHHHHHHHHHH---HHTCHHHHHHHHHHHHH----
T ss_pred HHHcCCHHHHHHHHHHHHHh-----CCCh--HHHHHHH-HHHHHHHHHHHHHHHHH---HcCCHHHHHHHHHHHHh----
Confidence 111 1112222233333321 2221 1111111 1110000000 11100 01113568888888876
Q ss_pred cCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 173 ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 173 ~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|.+|....-++..-...|.-.|+.++|+...++++.
T Consensus 286 -~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 323 (450)
T 2y4t_A 286 -TEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQ 323 (450)
T ss_dssp -HCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred -cCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 34667755444444334445558999999998888753
No 47
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=75.00 E-value=29 Score=27.35 Aligned_cols=30 Identities=7% Similarity=0.133 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVE 43 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~ 43 (265)
.-+..++.+....|+|++++.++++++ ...
T Consensus 80 ~~~~~l~~~~~~~~~~~~A~~~~~~a~-~~~ 109 (258)
T 3uq3_A 80 KSFARIGNAYHKLGDLKKTIEYYQKSL-TEH 109 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-HHC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHH-hcC
Confidence 345678889999999999999999998 654
No 48
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=74.39 E-value=33 Score=27.84 Aligned_cols=55 Identities=16% Similarity=-0.040 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 214 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 214 (265)
+.|...|++|++++... .+|...+.+++.-...|...|+.++|....+++++-+-
T Consensus 200 ~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 200 RDAVIAHEQRLLIAKEF---GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp HHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 46888999999888652 23444444444444455568999999988888776543
No 49
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=74.36 E-value=8.1 Score=32.70 Aligned_cols=55 Identities=9% Similarity=0.109 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 213 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 213 (265)
+.|...|++|+++++. .+....+...+..|.+..|+. +|+.++|+...++|++-+
T Consensus 172 ~~A~~~~~kal~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 172 KKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-cCccccchHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 5699999999999864 443222223566777776665 799999999999988765
No 50
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=74.24 E-value=46 Score=29.39 Aligned_cols=172 Identities=10% Similarity=-0.051 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhhHH
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVST 92 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~~~~ 92 (265)
.-+..++.+....|+|++++.++++++ ... +.- .+-...+..+|- ..+....+...+........... .....+
T Consensus 305 ~~~~~l~~~~~~~~~~~~A~~~~~~~~-~~~--~~~-~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~-~~~~~l 378 (514)
T 2gw1_A 305 SVYYHRGQMNFILQNYDQAGKDFDKAK-ELD--PEN-IFPYIQLACLAY-RENKFDDCETLFSEAKRKFPEAP-EVPNFF 378 (514)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHH-HTC--SSC-SHHHHHHHHHTT-TTTCHHHHHHHHHHHHHHSTTCS-HHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHH-HhC--hhh-HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHcccCH-HHHHHH
Confidence 456678888888888998888888888 554 442 333333444432 23445555555544332211110 111111
Q ss_pred HHHHH-HHHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHHHHHHHHHH
Q 024620 93 IRDYR-SKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIAN 171 (265)
Q Consensus 93 i~~yr-~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~la~ 171 (265)
..-|. ..-.++-......++.+- |........+..+-..|..|.... ..| -.+.|...|++|+.+
T Consensus 379 a~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~--~~~-----~~~~A~~~~~~a~~~-- 444 (514)
T 2gw1_A 379 AEILTDKNDFDKALKQYDLAIELE-----NKLDGIYVGIAPLVGKATLLTRNP--TVE-----NFIEATNLLEKASKL-- 444 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHH-----HTSSSCSSCSHHHHHHHHHHHTSC--CTT-----HHHHHHHHHHHHHHH--
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhh-----hccchHHHHHHHHHHHHHHHhhhh--hcC-----CHHHHHHHHHHHHHh--
Confidence 11111 111122333333444332 221111111112222233332100 022 135688889888864
Q ss_pred hcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 172 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 172 ~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
.|.+| ....+.+..+. -.|+.++|+...+++++
T Consensus 445 ---~~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~a~~ 477 (514)
T 2gw1_A 445 ---DPRSE---QAKIGLAQMKL-QQEDIDEAITLFEESAD 477 (514)
T ss_dssp ---CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred ---CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 34444 33344444444 47999999888777665
No 51
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=73.20 E-value=46 Score=28.95 Aligned_cols=180 Identities=8% Similarity=-0.008 Sum_probs=91.2
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHH-----HHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchh
Q 024620 15 NVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEE-----RNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDH 89 (265)
Q Consensus 15 li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eE-----RnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~ 89 (265)
+..++++....|+|++++++++++. ..- +.++... ++++...+. ..+..-.+..............++...
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~-~~~--~~~~~~~~~~~~~~~l~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~ 133 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHST-EYM--MQFAKSKTVKVLKTLIEKFEQ-VPDSLDDQIFVCEKSIEFAKREKRVFL 133 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTH-HHH--HTSCHHHHHHHHHHHHHHHCS-CCSCHHHHHHHHHHHHHHHHHSSCCSS
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHH-HHH--HHccchHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHhCccHH
Confidence 6789999999999999999999988 543 4555432 222222221 112222222222211111111111111
Q ss_pred hHHHHHHHHHHH------HHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHH
Q 024620 90 VSTIRDYRSKIE------TELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAY 163 (265)
Q Consensus 90 ~~~i~~yr~kie------~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY 163 (265)
...+....-++. .+...+.++++.... ...+....+-++-..|..|.- .++ .++|...|
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-----~~~-----~~~A~~~~ 198 (434)
T 4b4t_Q 134 KHSLSIKLATLHYQKKQYKDSLALINDLLREFK-----KLDDKPSLVDVHLLESKVYHK-----LRN-----LAKSKASL 198 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT-----TSSCSTHHHHHHHHHHHHHHH-----TTC-----HHHHHHHH
T ss_pred HHHHHHHHHHHHHHccChHHHHHHHHHHHHHHH-----hcccchhHHHHHHHHHHHHHH-----hCc-----HHHHHHHH
Confidence 111111111111 122222333332221 122223444344444444421 111 25689999
Q ss_pred HHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024620 164 KAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA 215 (265)
Q Consensus 164 ~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 215 (265)
++|..++.. .+ ..|.-.|...+...-+|...++..+|+..-.++|...-.
T Consensus 199 ~~al~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~ 248 (434)
T 4b4t_Q 199 TAARTAANS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHN 248 (434)
T ss_dssp HHHHHHHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 999998864 43 233444666666666777789999999988888876533
No 52
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=71.84 E-value=17 Score=25.70 Aligned_cols=71 Identities=15% Similarity=0.129 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLR 236 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLr 236 (265)
+.|...|++++. +.|.+|......++.+..++. +|+.++|+..-++++... -+......+...+..|+
T Consensus 56 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~~~------p~~~~~~~a~~~l~~l~ 123 (129)
T 2xev_A 56 QLAEAQFRDLVS-----RYPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVATQY------PGSDAARVAQERLQSIR 123 (129)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHS------TTSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHC------CCChHHHHHHHHHHHHH
Confidence 468888888875 346776655556666666664 799999988766655432 11222444555555555
Q ss_pred hhH
Q 024620 237 DNL 239 (265)
Q Consensus 237 DNL 239 (265)
.++
T Consensus 124 ~~~ 126 (129)
T 2xev_A 124 LGQ 126 (129)
T ss_dssp ---
T ss_pred hhh
Confidence 443
No 53
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=71.09 E-value=51 Score=28.56 Aligned_cols=52 Identities=8% Similarity=0.207 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 212 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 212 (265)
+.|...|++|++++... .+|.......|.+..++. +|+.++|+...++|+.-
T Consensus 239 ~~A~~~~~~al~~~~~~---~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 290 (378)
T 3q15_A 239 QMAVEHFQKAAKVSREK---VPDLLPKVLFGLSWTLCK-AGQTQKAFQFIEEGLDH 290 (378)
T ss_dssp HHHHHHHHHHHHHHHHH---CGGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh---CChhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHH
Confidence 57999999999998754 345444444555555554 79999999887776654
No 54
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=71.02 E-value=9 Score=34.14 Aligned_cols=53 Identities=15% Similarity=0.182 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAE-LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 210 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~-L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 210 (265)
+.|.++|++|+++.+.. ....||-.+...-|.+.-|+. +|+.++|...-+++.
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~ 121 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVK 121 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHH
Confidence 56999999999998653 345677777777788877776 799999877655553
No 55
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=70.85 E-value=14 Score=27.33 Aligned_cols=52 Identities=6% Similarity=-0.002 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 210 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 210 (265)
+.|...|++|+++... .++.++.+-....|.+..+ .-+|+.++|+..-++|+
T Consensus 59 ~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~lg~~~-~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 59 AECVQFCEKAVEVGRE-TRADYKLIAKAMSRAGNAF-QKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcc-cchhhHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHH
Confidence 5689999999998754 4444444333444555554 45899999987655544
No 56
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=70.71 E-value=38 Score=26.88 Aligned_cols=59 Identities=8% Similarity=0.047 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISS 76 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~ 76 (265)
+-+..+|.+..+.|+|++.+.++++++ ..+ +. +.+-...+..+|-. .+....+...+..
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~al-~~~--~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~ 96 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNTEQAKVPLRKAL-EID--PS-SADAHAALAVVFQT-EMEPKLADEEYRK 96 (252)
T ss_dssp HHHHHHHHHHHHTTCTGGGHHHHHHHH-HHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHH-hcC--CC-hHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 345678888889999999999999998 654 33 34445555555543 3445555555543
No 57
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=70.26 E-value=40 Score=26.94 Aligned_cols=49 Identities=18% Similarity=0.138 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 158 STLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 158 ~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
.|...|++++..... ..|......++.+..++ -+|+.++|+...++++.
T Consensus 195 ~a~~~~~~~~~~~~~----~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~ 243 (275)
T 1xnf_A 195 TLMERLKADATDNTS----LAEHLSETNFYLGKYYL-SLGDLDSATALFKLAVA 243 (275)
T ss_dssp HHHHHHHHHCCSHHH----HHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccccc----ccccccHHHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence 355555555443221 11222344455555555 47999999887776653
No 58
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=69.32 E-value=15 Score=25.11 Aligned_cols=45 Identities=16% Similarity=0.209 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 210 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 210 (265)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++++
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 4688899999864 44454 344566666555 799999888766655
No 59
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=68.61 E-value=49 Score=27.33 Aligned_cols=167 Identities=14% Similarity=0.123 Sum_probs=85.4
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhhHHHHHH
Q 024620 17 YMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDY 96 (265)
Q Consensus 17 ~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~~~~i~~y 96 (265)
.+|.+....|+|++++.++++++ ... | -+.+-...+..+|-. .+....+...+.......... ......+..-|
T Consensus 125 ~~a~~~~~~~~~~~A~~~~~~~~-~~~--~-~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~ 198 (359)
T 3ieg_A 125 SQALDAFDGADYTAAITFLDKIL-EVC--V-WDAELRELRAECFIK-EGEPRKAISDLKAASKLKSDN-TEAFYKISTLY 198 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH-HHC--T-TCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCSCC-HHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHH-HhC--C-CchHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHH
Confidence 44788899999999999999998 654 3 345555566665543 355566666665433321110 01111111111
Q ss_pred HH-HHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhh--------ccccchhhhhcCchhHHHHHHHHHHHHHHHH
Q 024620 97 RS-KIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMK--------GDYHRYLAEFKTGAERKEAAESTLTAYKAAQ 167 (265)
Q Consensus 97 r~-kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~Kmk--------gDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~ 167 (265)
.. .=.++-...+..++.+ -|. ......+|.++. |..+ +..| -.+.|...|++++
T Consensus 199 ~~~~~~~~A~~~~~~a~~~-----~~~--~~~~~~~~~~~~~~~~~~~~a~~~-----~~~~-----~~~~A~~~~~~~~ 261 (359)
T 3ieg_A 199 YQLGDHELSLSEVRECLKL-----DQD--HKRCFAHYKQVKKLNKLIESAEEL-----IRDG-----RYTDATSKYESVM 261 (359)
T ss_dssp HHHTCHHHHHHHHHHHHHH-----CTT--CHHHHHHHHHHHHHHHHHHHHHHH-----HHTT-----CHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhh-----Ccc--chHHHHHHHHHHHHHHHHHHHHHH-----HHcC-----CHHHHHHHHHHHH
Confidence 11 1112222333333332 122 122222232221 2211 1111 1356888888887
Q ss_pred HHHHhcCCCCCcchH-HHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024620 168 DIANAELAPTHPIRL-GLALNFSVFYYEILNSPDRACNLAKQAFDE 212 (265)
Q Consensus 168 ~la~~~L~pt~pirL-gLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 212 (265)
++ .|.+|... .+..+.+..++. .|+.++|+...++++..
T Consensus 262 ~~-----~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 262 KT-----EPSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQM 301 (359)
T ss_dssp HH-----CCSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred hc-----CCCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 64 34565443 334455555554 89999999988887663
No 60
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=68.50 E-value=16 Score=27.93 Aligned_cols=55 Identities=7% Similarity=0.027 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 213 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 213 (265)
+.|...|++|+.++.. .+ .+|...+.+++.-...|--+|++++|....++++.-+
T Consensus 83 ~~A~~~~~~al~~~~~-~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 83 DAARRCFLEERELLAS-LP-EDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHHH-SC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-cC-ccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 5689999999999873 44 2454455544444444445899999999988887654
No 61
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=68.17 E-value=53 Score=27.58 Aligned_cols=58 Identities=9% Similarity=0.004 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIIS 75 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~ 75 (265)
..+..++.+..+.|+|++++.++.+++ ... |. +.+-...+..+|.. .+....+...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al-~~~--p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAV-QQD--PK-HMEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHH-HSC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHH-HhC--CC-CHHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 457889999999999999999999999 654 43 45555555655543 234444444443
No 62
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=68.10 E-value=29 Score=27.24 Aligned_cols=48 Identities=23% Similarity=0.174 Sum_probs=37.8
Q ss_pred cCHHHHHHHHHHHHh--hcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 024620 26 ERYEEMVEFMEKVSA--SVESSEELTVEERNLLSVAYKNVIGARRASWRIIS 75 (265)
Q Consensus 26 eRy~Dm~~~mk~~i~--~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~ 75 (265)
+|.|..++++|.-+- ..| ++||.|-|.=|.--.|...-.-|-|.|-+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~--~plTEERRKeLVK~akk~aEeaKVAIRNIR 60 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTG--GGGTEERRKDLVKIVRGEAEGGRVAVRNIA 60 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCS--SBCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 577888888876552 247 899999999999888888777777777764
No 63
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=67.86 E-value=72 Score=29.02 Aligned_cols=55 Identities=11% Similarity=0.050 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024620 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 212 (265)
Q Consensus 156 ~~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 212 (265)
.+.|.+.|++++++... . +.+|-....+++.-...|...|+.++|+...++++..
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 35789999999987653 2 3456543334443344455589999999988887753
No 64
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=67.67 E-value=20 Score=30.17 Aligned_cols=53 Identities=11% Similarity=0.020 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHH-hhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGL-ALNFSVFYYEILNSPDRACNLAKQAFDEA 213 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgL-aLN~SVF~yEi~~~~~~A~~iAk~afd~A 213 (265)
+.|...|++|+.+.. +..++..... ..|.+++|+. +|+.++|+..-++|++.+
T Consensus 132 ~~Ai~~~~~al~~~~---~~~~~~~~~~~~~~lg~~y~~-~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 132 EYCILELKKLLNQQL---TGIDVYQNLYIENAIANIYAE-NGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHHTCC---CCSCTTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc---ccccHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 568999999998542 2333333333 4455555554 899999999988888643
No 65
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=67.55 E-value=21 Score=23.45 Aligned_cols=46 Identities=20% Similarity=0.384 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 4688899998864 34443 344566665554 7999999887777664
No 66
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=66.88 E-value=70 Score=28.50 Aligned_cols=54 Identities=13% Similarity=0.112 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHh--cCCCCCcc---hHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 158 STLTAYKAAQDIANA--ELAPTHPI---RLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 158 ~A~~aY~~A~~la~~--~L~pt~pi---rLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
.+...|.+|....+. .+.|.+|- .++.++..--..|...|+.++|+...++++.
T Consensus 213 ~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~ 271 (537)
T 3fp2_A 213 VANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESIN 271 (537)
T ss_dssp HHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 344455555554433 35566653 2455555555566668999999988888765
No 67
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=66.75 E-value=18 Score=25.77 Aligned_cols=47 Identities=15% Similarity=0.269 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 212 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 212 (265)
+.|...|++|+++ .|.+ ..+..|.+..++. +|+.++|+...++++..
T Consensus 44 ~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 5688899988864 4445 3455667766665 79999999988887754
No 68
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=66.39 E-value=53 Score=26.88 Aligned_cols=55 Identities=15% Similarity=-0.031 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCC-cchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTH-PIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 212 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~-pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 212 (265)
+.|...|++|+.+....-.+.+ |-......+.+..++ ..|+.++|+...++++..
T Consensus 210 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 210 KTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCR-KLKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence 5689999999998754333222 333334455555554 479999999888877653
No 69
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=66.30 E-value=18 Score=31.09 Aligned_cols=55 Identities=13% Similarity=0.099 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 212 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 212 (265)
+.|...|++|+.++...-.+.+|.......|.+..+++ .|+.++|.....+++.-
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEV 164 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHH
Confidence 46888999999988764444456655556667766665 69999988888777654
No 70
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=66.19 E-value=65 Score=27.83 Aligned_cols=176 Identities=11% Similarity=0.026 Sum_probs=86.9
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCH-----HHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCc-chhh
Q 024620 17 YMAKLAEQAERYEEMVEFMEKVSASVESSEELTV-----EERNLLSVAYKNVIGARRASWRIISSIEQKEESRGN-EDHV 90 (265)
Q Consensus 17 ~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~-----eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~-~~~~ 90 (265)
+++.+....|+|++++.++++.+ ..- ..+.. +=...+..+|-. .+..-.|...+.....--...++ ....
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al-~~~--~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~ 183 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAE-SKL--IFVKDRIEKAEFFFKMSESYYY-MKQTYFSMDYARQAYEIYKEHEAYNIRL 183 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH-TTG--GGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTCSTTHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHH-HHH--hhCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhCccchHHH
Confidence 37888888999999999999988 542 22222 122333333332 23333333333211111010111 0000
Q ss_pred HHH-----HHHH-HHHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHHH
Q 024620 91 STI-----RDYR-SKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYK 164 (265)
Q Consensus 91 ~~i-----~~yr-~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~ 164 (265)
..+ .-|. ..=-++-...+...+.+.... .+.......+.-.|..|..+ |+ -+.|...|+
T Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~lg~~y~~~-----g~-----~~~A~~~~~ 248 (383)
T 3ulq_A 184 LQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE-----KQPQLMGRTLYNIGLCKNSQ-----SQ-----YEDAIPYFK 248 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHT-----TC-----HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHHHHHC-----CC-----HHHHHHHHH
Confidence 000 0000 011122333344444443321 12222222333345555322 11 257999999
Q ss_pred HHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024620 165 AAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 214 (265)
Q Consensus 165 ~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 214 (265)
+|++++...-. .|.......|.+..|+. +|+.++|....++|+.-+-
T Consensus 249 ~al~~~~~~~~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 249 RAIAVFEESNI--LPSLPQAYFLITQIHYK-LGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHHTTC--GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcc--chhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 99999875322 14444445555655554 7999999999888877653
No 71
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=65.80 E-value=54 Score=26.78 Aligned_cols=44 Identities=16% Similarity=0.053 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHH
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAY 60 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvay 60 (265)
+.++.+|....+.|+|++++.++++++ ... +. +.+-...+..+|
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~-~~~--~~-~~~~~~~l~~~~ 65 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVC-QAA--PE-REEAWRSLGLTQ 65 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHH-HHC--TT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHH-HhC--CC-CHHHHHHHHHHH
Confidence 345667777777777777777777776 443 33 334444444444
No 72
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=64.55 E-value=24 Score=23.69 Aligned_cols=46 Identities=13% Similarity=0.188 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+ .|.+ .....+.+..++. .|+.++|+...++++.
T Consensus 23 ~~A~~~~~~a~~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 23 TESIDLFEKAIQL-----DPEE---SKYWLMKGKALYN-LERYEEAVDCYNYVIN 68 (112)
T ss_dssp HHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 4688889888864 2333 3345666666665 7999999887766654
No 73
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=64.53 E-value=33 Score=23.89 Aligned_cols=72 Identities=17% Similarity=0.126 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLR 236 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLr 236 (265)
+.|...|++|+++ .|.+|. ...+.+..|+ -+|+.++|+...++|+.-+-.. ....-...+.++|+
T Consensus 24 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~~~------~~~~~~~~l~~~l~ 88 (100)
T 3ma5_A 24 SRALALFEELVET-----DPDYVG---TYYHLGKLYE-RLDRTDDAIDTYAQGIEVAREE------GTQKDLSELQDAKL 88 (100)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHH------SCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHhhhhcC------CchhHHHHHHHHHH
Confidence 5688899998864 344443 4455555554 4899999998888887655332 12333455556665
Q ss_pred hhHhhhh
Q 024620 237 DNLTLWT 243 (265)
Q Consensus 237 DNL~lW~ 243 (265)
..=..|.
T Consensus 89 ~~~~~~~ 95 (100)
T 3ma5_A 89 KAEGLEH 95 (100)
T ss_dssp HHHTTC-
T ss_pred Hcccccc
Confidence 5544443
No 74
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=64.13 E-value=1.2e+02 Score=30.12 Aligned_cols=168 Identities=13% Similarity=0.125 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH-HhhhhhhcCcchhhH
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISS-IEQKEESRGNEDHVS 91 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~-~eqk~~~~~~~~~~~ 91 (265)
+-+..++.+..+.|+|++++.+.++.+ +++ |+. .+=.+-|..+|... +..-.|...+.. ++-+... -.....
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl-~l~--P~~-~~a~~nLg~~l~~~-g~~~eA~~~~~~Al~l~P~~--~~a~~n 82 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKAL-EVF--PEF-AAAHSNLASVLQQQ-GKLQEALMHYKEAIRISPTF--ADAYSN 82 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-HHC--SCC-HHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTC--HHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH-HhC--CCC-HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCC--HHHHHH
Confidence 556788999999999999999999999 776 554 44455566665532 334444444332 2111110 001111
Q ss_pred HHHHHHH-HHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHHHHHHHHH
Q 024620 92 TIRDYRS-KIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIA 170 (265)
Q Consensus 92 ~i~~yr~-kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~la 170 (265)
+-.-|.. .=-++-...++..+.+ -|.. ..++ ...|..|+-+ |. .+.|..+|++|+++
T Consensus 83 Lg~~l~~~g~~~~A~~~~~kAl~l-----~P~~----~~a~--~~Lg~~~~~~-----g~-----~~eAi~~~~~Al~l- 140 (723)
T 4gyw_A 83 MGNTLKEMQDVQGALQCYTRAIQI-----NPAF----ADAH--SNLASIHKDS-----GN-----IPEAIASYRTALKL- 140 (723)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTC----HHHH--HHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCC----HHHH--HHHHHHHHHc-----CC-----HHHHHHHHHHHHHh-
Confidence 1111111 0011222223333332 1221 1121 1223333211 11 35688999999864
Q ss_pred HhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 024620 171 NAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAEL 217 (265)
Q Consensus 171 ~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~l 217 (265)
.|.+|- ...|.+. .|..+|+.++|++..+++.+-.-..+
T Consensus 141 ----~P~~~~---a~~~L~~-~l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 141 ----KPDFPD---AYCNLAH-CLQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp ----CSCCHH---HHHHHHH-HHHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred ----CCCChH---HHhhhhh-HHHhcccHHHHHHHHHHHHHhChhHH
Confidence 455542 3344443 34457888888888887776555443
No 75
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=63.85 E-value=67 Score=27.17 Aligned_cols=26 Identities=8% Similarity=0.011 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHH
Q 024620 14 ENVYMAKLAEQAERYEEMVEFMEKVS 39 (265)
Q Consensus 14 ~li~~Aklaeq~eRy~Dm~~~mk~~i 39 (265)
-+..++.+....|+|++++.++++.+
T Consensus 49 ~~~~l~~~~~~~g~~~~A~~~~~~al 74 (406)
T 3sf4_A 49 IYSQLGNAYFYLHDYAKALEYHHHDL 74 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 45578888889999999999999887
No 76
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=63.59 E-value=68 Score=27.15 Aligned_cols=59 Identities=10% Similarity=0.216 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 024620 12 REENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIIS 75 (265)
Q Consensus 12 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~ 75 (265)
-.-+..++.+..+.|+|++.+.++++++ ..+ |. +.+-...+..+|.. .+....+...+.
T Consensus 99 ~~~~~~lg~~~~~~g~~~~A~~~~~~al-~~~--p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 157 (365)
T 4eqf_A 99 AEAWQFLGITQAENENEQAAIVALQRCL-ELQ--PN-NLKALMALAVSYTN-TSHQQDACEALK 157 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHH-hcC--CC-CHHHHHHHHHHHHc-cccHHHHHHHHH
Confidence 4566788999999999999999999999 665 43 34445555555543 344455555554
No 77
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=63.37 E-value=56 Score=26.10 Aligned_cols=46 Identities=15% Similarity=0.081 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHh
Q 024620 12 REENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYK 61 (265)
Q Consensus 12 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayK 61 (265)
-+-+..++.+..+.|+|++.+.++++++ ..+ |. +.+-...+..+|.
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al-~~~--P~-~~~a~~~lg~~~~ 84 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLV-ART--PR-YLGGYMVLSEAYV 84 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHC--TT-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH-HhC--CC-cHHHHHHHHHHHH
Confidence 4566788999999999999999999999 765 54 3444555555554
No 78
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.91 E-value=18 Score=25.97 Aligned_cols=49 Identities=27% Similarity=0.220 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+. +.|.+|....+..+.+..++. +|+.++|+...++++.
T Consensus 45 ~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~ 93 (148)
T 2dba_A 45 GGALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIE 93 (148)
T ss_dssp HHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 356777777763 445555555666666666554 6888888777776654
No 79
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=62.53 E-value=29 Score=23.47 Aligned_cols=47 Identities=19% Similarity=0.147 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+++ .|.+|.. ...+.+..|+. +|+.++|+...++++.
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 4678888888753 4455421 45566666665 7999998887666654
No 80
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=62.06 E-value=61 Score=27.64 Aligned_cols=108 Identities=20% Similarity=0.296 Sum_probs=64.7
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhhHHHHHHH
Q 024620 18 MAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYR 97 (265)
Q Consensus 18 ~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~~~~i~~yr 97 (265)
.|+|.+....|-.|++-+|.-..+ ..|..|.=.-||=.+.. +|.+. +.+ ..|++-.
T Consensus 100 iarllekiqkyfQ~IEtlK~ql~n--------f~e~RLiYDHYKlKvdE----------LEK~~---KdS---eKI~RNQ 155 (294)
T 3caz_A 100 IARLLEKIQKYRQEIEEIKKEYKE--------TDKYRERYDHYKVKLDN----------LEKKN---KDQ---ERIERNQ 155 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHH----------HHHHT---CCH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh--------hHHHHHHHHHHHHhHHH----------HHhcc---chH---HHHHHhH
Confidence 578888888888888888663312 34556666666654443 22211 112 2233333
Q ss_pred H---HHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHHHHHHHHHHh
Q 024620 98 S---KIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANA 172 (265)
Q Consensus 98 ~---kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~la~~ 172 (265)
. +.+.--..+|-|+|+-.+ ++-|.|||.++|.++. +=..+--|-+|++.|..
T Consensus 156 sKLssAEtaYkqvcsDiInkMn-----------------kll~n~~riineaasa------vwstqlqyakaleaaan 210 (294)
T 3caz_A 156 QKFKDAEAAYSSVCADLIQKME-----------------TVWKKHVSIFAEAASA------VWSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHG
T ss_pred HHhhhHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhcC
Confidence 3 344555667777777655 4568889999887653 22334568888887753
No 81
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=60.69 E-value=35 Score=23.99 Aligned_cols=49 Identities=10% Similarity=0.054 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++++. ..|.+|..-...++.+..++. .|+.++|+...++++.
T Consensus 19 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~ 67 (129)
T 2xev_A 19 DDASQLFLSFLE-----LYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVS 67 (129)
T ss_dssp HHHHHHHHHHHH-----HCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 457777777764 356788655566666666665 7999999988777665
No 82
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=60.52 E-value=39 Score=25.37 Aligned_cols=46 Identities=9% Similarity=0.091 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+ .|.+| ....|.+..|+. +|+.++|+...++++.
T Consensus 62 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 62 EKAAEDAELATVV-----DPKYS---KAWSRLGLARFD-MADYKGAKEAYEKGIE 107 (164)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 4566677777654 34443 344555555554 6888888776666554
No 83
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=60.02 E-value=68 Score=25.97 Aligned_cols=66 Identities=14% Similarity=0.084 Sum_probs=46.2
Q ss_pred ChHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCC--CHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhh
Q 024620 11 PREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEEL--TVEERNLLSVAYKNVIGARRASWRIISSIEQK 80 (265)
Q Consensus 11 ~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eL--t~eERnLlSvayKn~i~~~R~s~R~l~~~eqk 80 (265)
.-+.+..+|...-+.|+|++++..+.+++ ... |.- ..+=...+..+|-. .+....+...+......
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l-~~~--p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~~ 81 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVF-TYG--RTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQI 81 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHG-GGC--SCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHH-HhC--CCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHH
Confidence 45778899999999999999999999999 654 332 25555566666543 46666777777654443
No 84
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=59.80 E-value=75 Score=26.44 Aligned_cols=188 Identities=14% Similarity=0.042 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHh-----hhhhhhhHHHHHHHH-HhhhhhhcCcc
Q 024620 14 ENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYK-----NVIGARRASWRIISS-IEQKEESRGNE 87 (265)
Q Consensus 14 ~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayK-----n~i~~~R~s~R~l~~-~eqk~~~~~~~ 87 (265)
.+...+...-..|+|++++.++++.+ +.. +. ..+....+..-|. ...+..-.|...+.. ++..... .+.
T Consensus 77 ~l~~~~~~~~~~~~y~~A~~~~~~~l-~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~ 151 (293)
T 2qfc_A 77 QFKDQVIMLCKQKRYKEIYNKVWNEL-KKE--EY-HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTG-IDV 151 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH-HTC--CC-CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCS-SCT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHh-ccc--cC-ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcC-Cch
Confidence 34456666667799999999999888 543 33 3333222221111 112233445554432 2111110 111
Q ss_pred hh-h----HHHHHHH-HHHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhcCchhHHHHHHHHHH
Q 024620 88 DH-V----STIRDYR-SKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLT 161 (265)
Q Consensus 88 ~~-~----~~i~~yr-~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~ 161 (265)
.. . .+..-|. ..=-++-....+..+.+.+. .|. +....+..+-..|..|..+ |+ -+.|..
T Consensus 152 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~--~~~--~~~~~~~~~~nlg~~y~~~-----~~-----y~~Al~ 217 (293)
T 2qfc_A 152 YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA--LHD--NEEFDVKVRYNHAKALYLD-----SR-----YEESLY 217 (293)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--SCC--CHHHHHHHHHHHHHHHHHT-----TC-----HHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--cCc--cccchHHHHHhHHHHHHHH-----hh-----HHHHHH
Confidence 10 0 1111111 11123444555566655443 222 1111111222334444322 11 257999
Q ss_pred HHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchH
Q 024620 162 AYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYK 226 (265)
Q Consensus 162 aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ 226 (265)
.|++|++++.. ..++..++.+++.--..|.-+|+.++|+ ...|+.|+.-.+.++...++
T Consensus 218 ~~~kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai---~~~~~~Al~~~~~~~~~~~~ 276 (293)
T 2qfc_A 218 QVNKAIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEI---EDAYKKASFFFDILEMHAYK 276 (293)
T ss_dssp HHHHHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHH---HHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHH---HHHHHHHHHHHHHhCcHhhH
Confidence 99999999853 2344455655555455556689999994 23344555555555655553
No 85
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=59.76 E-value=79 Score=26.69 Aligned_cols=51 Identities=6% Similarity=0.002 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 210 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 210 (265)
+.|...|++|+.+... .+. +| ..+.++.-.+..|-.+|+.++|+...+++.
T Consensus 172 ~~A~~~~~~al~~~~~-~~~-~~-~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 172 DEAAASLQKEKSMYKE-MEN-YP-TCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHH-TTC-HH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH-cCC-hh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 5789999999998864 222 22 233233333444555799999988766654
No 86
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=59.67 E-value=56 Score=24.92 Aligned_cols=168 Identities=9% Similarity=-0.040 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhhHH
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVST 92 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~~~~ 92 (265)
.-+..++.+....|+|++.+.++++++ ... +. +.+-...+..+|-. .+....+...+....+..... ......+
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~-~~~--~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~-~~~~~~l 82 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDAL-KSD--PK-NELAWLVRAEIYQY-LKVNDKAQESFRQALSIKPDS-AEINNNY 82 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-HHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC-HHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHH-HhC--cc-chHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCCCC-hHHHHHH
Confidence 445678888999999999999999998 654 43 34445555555542 344555655554332221100 0111111
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHhhhccCCCCCCCchhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHHHHHHHHHHh
Q 024620 93 IRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANA 172 (265)
Q Consensus 93 i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~la~~ 172 (265)
..-|... ..--.+.+..++..+- ....+. ....+...|..|... |+ .+.|...|+++++.
T Consensus 83 ~~~~~~~-----~~~~~~A~~~~~~~~~-~~~~~~-~~~~~~~l~~~~~~~-----~~-----~~~A~~~~~~~~~~--- 142 (225)
T 2vq2_A 83 GWFLCGR-----LNRPAESMAYFDKALA-DPTYPT-PYIANLNKGICSAKQ-----GQ-----FGLAEAYLKRSLAA--- 142 (225)
T ss_dssp HHHHHTT-----TCCHHHHHHHHHHHHT-STTCSC-HHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH---
T ss_pred HHHHHHh-----cCcHHHHHHHHHHHHc-CcCCcc-hHHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHh---
Confidence 1111110 0001122222222221 111121 222223345444321 21 24678888888764
Q ss_pred cCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024620 173 ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 212 (265)
Q Consensus 173 ~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 212 (265)
.|.+| ....+.+..++ -.|+.++|+...++++..
T Consensus 143 --~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 143 --QPQFP---PAFKELARTKM-LAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp --STTCH---HHHHHHHHHHH-HHTCHHHHHHHHHHHHHH
T ss_pred --CCCCc---hHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Confidence 34443 23344444444 479999999888777653
No 87
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=59.13 E-value=31 Score=24.55 Aligned_cols=46 Identities=20% Similarity=0.103 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+ .|.+| .+..|.+..++. +|+.++|+...++++.
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 21 PNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 3566677776653 23333 334444444443 5777777766666544
No 88
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=58.58 E-value=63 Score=25.14 Aligned_cols=60 Identities=7% Similarity=-0.051 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSI 77 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~ 77 (265)
..+..+|...-+.|+|++++.++++++ ... + -+.+-...+..+|- ..+....+.+.+...
T Consensus 24 ~~~~~~a~~~~~~~~~~~A~~~~~~~l-~~~--~-~~~~~~~~la~~~~-~~~~~~~A~~~~~~~ 83 (243)
T 2q7f_A 24 MTGGQQMGRGSEFGDYEKAAEAFTKAI-EEN--K-EDAIPYINFANLLS-SVNELERALAFYDKA 83 (243)
T ss_dssp ------------------CCTTHHHHH-TTC--T-TCHHHHHHHHHHHH-HTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHH-HhC--c-ccHHHHHHHHHHHH-HcCCHHHHHHHHHHH
Confidence 456678888889999999999999998 543 3 34555555555553 244555666665543
No 89
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=57.86 E-value=31 Score=25.36 Aligned_cols=46 Identities=7% Similarity=0.018 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+++ .|.+| ....|.+..|+. +|+.++|+..-++|+.
T Consensus 64 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 64 QRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 4688899999864 45554 344555555554 7999998876655543
No 90
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=57.45 E-value=91 Score=26.68 Aligned_cols=26 Identities=4% Similarity=-0.009 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHH
Q 024620 14 ENVYMAKLAEQAERYEEMVEFMEKVS 39 (265)
Q Consensus 14 ~li~~Aklaeq~eRy~Dm~~~mk~~i 39 (265)
-+..++.+....|+|++.+.++++.+
T Consensus 88 ~~~~lg~~~~~~g~~~~A~~~~~~al 113 (411)
T 4a1s_A 88 IYSQLGNAYFYLGDYNKAMQYHKHDL 113 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 35678888888999999999999887
No 91
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=57.38 E-value=39 Score=37.18 Aligned_cols=22 Identities=14% Similarity=0.098 Sum_probs=19.5
Q ss_pred HHHHHHHHhCChHHHHHHHHHH
Q 024620 188 FSVFYYEILNSPDRACNLAKQA 209 (265)
Q Consensus 188 ~SVF~yEi~~~~~~A~~iAk~a 209 (265)
-.|-+|+-.|..++|+.+..+|
T Consensus 1285 eli~yYe~~G~feEAI~LlE~a 1306 (1630)
T 1xi4_A 1285 ELINYYQDRGYFEELITMLEAA 1306 (1630)
T ss_pred HHHHHHHHcCCHHHHHHHHHHH
Confidence 4577889999999999999988
No 92
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=57.33 E-value=35 Score=27.62 Aligned_cols=53 Identities=17% Similarity=0.226 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHH-----HhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLG-----LALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLg-----LaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|..+|++|+++.-. .|+..++.+. +-.|-+.-+.. +|+.++|+..+.+|+.
T Consensus 28 eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 28 DEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 5799999999998754 3333333333 56666665555 7999999988777765
No 93
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=56.95 E-value=36 Score=23.65 Aligned_cols=46 Identities=13% Similarity=0.130 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALEA-MKDYTKAMDVYQKALD 112 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHHH-HhhHHHHHHHHHHHHH
Confidence 4688888888864 33443 344556555554 7999999887777664
No 94
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=55.88 E-value=67 Score=25.89 Aligned_cols=93 Identities=19% Similarity=0.231 Sum_probs=53.7
Q ss_pred ccccchhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCc---chHHHhhhHHHHH----HHHhCChHHHHHHHHHH
Q 024620 137 GDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHP---IRLGLALNFSVFY----YEILNSPDRACNLAKQA 209 (265)
Q Consensus 137 gDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~la~~~L~pt~p---irLgLaLN~SVF~----yEi~~~~~~A~~iAk~a 209 (265)
|.-+.=+..+..+.+.....+.|..+|++|+++ .|.++ ..||.++.---|+ -+-.++.++|+. +
T Consensus 43 G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~----~ 113 (158)
T 1zu2_A 43 GGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ----F 113 (158)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----H
T ss_pred HHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHH----H
Confidence 445555666777777777789999999999864 45555 3455555332221 011235555555 6
Q ss_pred HHHHHHhhcccCccchHHHHHHHHHHHhhHhhhh
Q 024620 210 FDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWT 243 (265)
Q Consensus 210 fd~Ai~~ld~l~ee~y~ds~~IlqLLrDNL~lW~ 243 (265)
|+.|+.. +.+ +.+...-+++...+-.+|.
T Consensus 114 ~~kAl~l----~P~-~~~y~~al~~~~ka~el~~ 142 (158)
T 1zu2_A 114 FQQAVDE----QPD-NTHYLKSLEMTAKAPQLHA 142 (158)
T ss_dssp HHHHHHH----CTT-CHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHh----CCC-CHHHHHHHHHHHhCHhccC
Confidence 6666653 222 2344455566667766665
No 95
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=55.63 E-value=38 Score=24.09 Aligned_cols=15 Identities=20% Similarity=0.472 Sum_probs=7.0
Q ss_pred hCChHHHHHHHHHHH
Q 024620 196 LNSPDRACNLAKQAF 210 (265)
Q Consensus 196 ~~~~~~A~~iAk~af 210 (265)
+|+.++|+...++++
T Consensus 56 ~~~~~~A~~~~~~al 70 (137)
T 3q49_B 56 MQQPEQALADCRRAL 70 (137)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHH
Confidence 455555544444443
No 96
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=55.38 E-value=41 Score=23.13 Aligned_cols=49 Identities=20% Similarity=0.403 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 214 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 214 (265)
+.|...|++|+.+ .|.+| .+..+.+..++. .|+.++|+....+++...-
T Consensus 21 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~ 69 (131)
T 1elr_A 21 DTALKHYDKAKEL-----DPTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVGR 69 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhcc
Confidence 5688888888864 23443 344556666555 7999999998888877553
No 97
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=54.95 E-value=15 Score=26.21 Aligned_cols=50 Identities=10% Similarity=0.037 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 212 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 212 (265)
+.|...|++|++ +.+.+|-......|.+..|+. +|+.++|+...++++..
T Consensus 7 ~~A~~~~~~al~-----~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 7 AQAVPYYEKAIA-----SGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVKQ 56 (117)
T ss_dssp CCCHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 357788888875 334467777777788777776 79999999988887653
No 98
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=54.47 E-value=41 Score=23.85 Aligned_cols=48 Identities=8% Similarity=0.009 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 213 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 213 (265)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.-.
T Consensus 55 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence 4688999999865 34443 344555555554 799999998888777654
No 99
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=54.47 E-value=35 Score=25.83 Aligned_cols=46 Identities=20% Similarity=0.321 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|..+|++|+++ .|.|| ....+.+..|+. +|+.++|+...+.+..
T Consensus 22 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 22 DGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 5688899998864 45554 233344444443 6888888877766643
No 100
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=54.07 E-value=79 Score=24.91 Aligned_cols=61 Identities=7% Similarity=-0.045 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Q 024620 12 REENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSI 77 (265)
Q Consensus 12 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~ 77 (265)
..-+..+|.+..+.|+|++++.++++++ ... +. +..-...+..+|-. .+....+.+.+...
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~-~~~--~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~~ 131 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKAL-ASD--SR-NARVLNNYGGFLYE-QKRYEEAYQRLLEA 131 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH-HHC--cC-cHHHHHHHHHHHHH-HhHHHHHHHHHHHH
Confidence 3456778999999999999999999998 654 43 34444455555533 44555666666543
No 101
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=53.11 E-value=52 Score=22.92 Aligned_cols=48 Identities=17% Similarity=0.063 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 213 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 213 (265)
+.|...|++|+.+ .|.++ ....+.+..|.. +|+.++|+...++++...
T Consensus 36 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 36 DAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAAA 83 (115)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhc
Confidence 5688899998864 34443 234555555554 799999998877777654
No 102
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=52.23 E-value=67 Score=23.52 Aligned_cols=48 Identities=19% Similarity=0.105 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 213 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 213 (265)
+.|..+|++|+.+ .|.+|. ..+|.+..|+. +|+.++|+...++++...
T Consensus 69 ~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 69 EQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 5689999999864 466663 34556665554 799999998777766543
No 103
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=51.68 E-value=30 Score=20.25 Aligned_cols=27 Identities=33% Similarity=0.529 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHhHhHHHHhhh
Q 024620 91 STIRDYRSKIETELSSICDGILKLLDS 117 (265)
Q Consensus 91 ~~i~~yr~kie~EL~~~C~eii~lId~ 117 (265)
+.++.||.+|.+.|..+.+.|-.++.+
T Consensus 4 krlrkfrnkikeklkkigqkiqgllpk 30 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLPK 30 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 457889999999999999988877643
No 104
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=51.51 E-value=43 Score=22.48 Aligned_cols=45 Identities=11% Similarity=-0.003 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 210 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 210 (265)
+.|...|++|+++ .|.+| ....+.+..++ -+|+.++|+...++++
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~ 99 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALE-FLNRFEEAKRTYEEGL 99 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HHhhHHHHHHHHHHHH
Confidence 4678888888764 34443 34456665554 4799999988766554
No 105
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=50.89 E-value=76 Score=23.80 Aligned_cols=46 Identities=11% Similarity=0.042 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence 4678888888864 34443 445566666555 6999998887666554
No 106
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=50.88 E-value=92 Score=24.76 Aligned_cols=48 Identities=6% Similarity=-0.106 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCC---hHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNS---PDRACNLAKQAFDEA 213 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~---~~~A~~iAk~afd~A 213 (265)
+.|...|++|+++ .|.++ ...++.+..++ .+++ .++|+...+++++..
T Consensus 159 ~~A~~~~~~a~~~-----~p~~~---~~~~~~~~~~~-~~~~~~~~~~A~~~~~~a~~~~ 209 (272)
T 3u4t_A 159 VKADSSFVKVLEL-----KPNIY---IGYLWRARANA-AQDPDTKQGLAKPYYEKLIEVC 209 (272)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHH-HHSTTCSSCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----Cccch---HHHHHHHHHHH-HcCcchhhHHHHHHHHHHHHHH
Confidence 5678888888764 34443 22233333333 3466 666766665555443
No 107
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=50.85 E-value=40 Score=25.44 Aligned_cols=46 Identities=9% Similarity=0.025 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|..+|++|+.+ .|.+|. ..+|.++.|+. +|+.++|+...++++.
T Consensus 72 ~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~ 117 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQE 117 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5689999999864 456663 34566666665 7999999876665544
No 108
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=50.83 E-value=33 Score=29.34 Aligned_cols=73 Identities=15% Similarity=0.080 Sum_probs=44.1
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhhHHHHHHHHHHHHHHHHHhHhHHHHhhhcc
Q 024620 46 EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRL 119 (265)
Q Consensus 46 ~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~L 119 (265)
|+||.|-|.=|....|...-.-|-+.|-+..--...- +...+...+-++-.++.++++..+.+..+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~l-Kk~~K~~~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDL-KKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999888888888887742111000 000000011234445666677777777666666543
No 109
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=50.55 E-value=54 Score=22.35 Aligned_cols=16 Identities=19% Similarity=0.073 Sum_probs=9.3
Q ss_pred hCChHHHHHHHHHHHH
Q 024620 196 LNSPDRACNLAKQAFD 211 (265)
Q Consensus 196 ~~~~~~A~~iAk~afd 211 (265)
.|+.++|+....+++.
T Consensus 59 ~~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 59 LGNYAGAVQDCERAIC 74 (131)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred hhchHHHHHHHHHHHh
Confidence 5666666665555544
No 110
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=50.16 E-value=56 Score=22.29 Aligned_cols=47 Identities=17% Similarity=0.090 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 212 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 212 (265)
+.|...|++|+.+ .|.+| ....+.+..++ -+|+.++|+...++++..
T Consensus 63 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 63 AGAVQDCERAICI-----DPAYS---KAYGRMGLALS-SLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CccCH---HHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 4688888888864 34443 23345555544 479999998877776643
No 111
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=50.01 E-value=45 Score=28.05 Aligned_cols=53 Identities=9% Similarity=-0.005 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 212 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 212 (265)
+.|..+|++|+++... +. +|...+.+++-.-..|.-+|++++|+...++|+.-
T Consensus 54 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l 106 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-AG--NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQI 106 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 5699999999998764 32 55555556655555666689999999888777654
No 112
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=50.00 E-value=52 Score=25.55 Aligned_cols=49 Identities=20% Similarity=0.304 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCc-------------chHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHP-------------IRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~p-------------irLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+. |.+| +...+..|.+..++. +|+.++|+....+++.
T Consensus 55 ~~A~~~~~~al~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 55 NEAIVKYKEALDFF-----IHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHTT-----TTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 45778888887643 3344 113455666666665 7999999888877754
No 113
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=49.92 E-value=30 Score=28.04 Aligned_cols=72 Identities=18% Similarity=0.137 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHh--cCCCCCc-------chHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHH
Q 024620 157 ESTLTAYKAAQDIANA--ELAPTHP-------IRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKD 227 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~--~L~pt~p-------irLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~d 227 (265)
+.|..+|.+|+++-.. .+.|.++ .++|.+|. -+|+.++|+.--++|+.-. .-+-..+++
T Consensus 74 ~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~-------~lgr~eEAl~~y~kAlel~-----p~d~~~~~~ 141 (159)
T 2hr2_A 74 DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALD-------GLGRGAEAMPEFKKVVEMI-----EERKGETPG 141 (159)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHH-------HTTCHHHHHHHHHHHHHHH-----HHCCSCCTT
T ss_pred HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHH-------HCCCHHHHHHHHHHHHhcC-----CCcHHHHHH
Confidence 4688899999987322 3566554 34444443 3899999987555544432 223344666
Q ss_pred HHHHHHHHHhhHh
Q 024620 228 STLIMQLLRDNLT 240 (265)
Q Consensus 228 s~~IlqLLrDNL~ 240 (265)
...+.+.+.+.+.
T Consensus 142 ~~~~~~~~~~~~~ 154 (159)
T 2hr2_A 142 KERMMEVAIDRIA 154 (159)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6666666655443
No 114
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=49.19 E-value=57 Score=21.83 Aligned_cols=47 Identities=21% Similarity=0.220 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 212 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~ 212 (265)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 21 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 21 DDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 5678888888764 34443 344555555554 79999999888877653
No 115
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=48.57 E-value=54 Score=23.82 Aligned_cols=46 Identities=9% Similarity=-0.134 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVK 109 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 4678888888864 34443 344555555554 7999999887777764
No 116
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=48.38 E-value=19 Score=32.33 Aligned_cols=54 Identities=17% Similarity=0.241 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHhc--------CCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAE--------LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~--------L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+.... ....+|....+.+|.+..|+. +|+.++|+..+.+|+.
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 46888999998865431 011467777888888888775 7999999988887764
No 117
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.84 E-value=58 Score=23.08 Aligned_cols=46 Identities=13% Similarity=-0.039 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 82 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 82 DKAETEASKAIEK-----DGGDV---KALYRRSQALEK-LGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHHHHH-----TSCCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CccCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 4688888888764 34443 334555555554 7999999877666654
No 118
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=47.74 E-value=87 Score=23.58 Aligned_cols=55 Identities=11% Similarity=-0.104 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 214 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 214 (265)
+.|...|++|+.++.. . .+|...+.++..-...|.-.|+.++|+...++|++-+-
T Consensus 124 ~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 124 AGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 5689999999998864 2 24555555555545555568999999988777776553
No 119
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=46.96 E-value=25 Score=25.21 Aligned_cols=30 Identities=10% Similarity=0.018 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVE 43 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~ 43 (265)
.-+++++.++.+.|+|++.+.+..++. +.+
T Consensus 44 rA~~~lg~~~~~~g~y~~Ai~~w~~~l-~~~ 73 (93)
T 3bee_A 44 AALSLIANDHFISFRFQEAIDTWVLLL-DSN 73 (93)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-TCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH-hhC
Confidence 456677888888888888888888877 554
No 120
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=46.94 E-value=56 Score=24.53 Aligned_cols=46 Identities=9% Similarity=0.156 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+++ .|.||- .-.+.+..|+ -+|+.++|+..-++|+.
T Consensus 48 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDPK---AHRFLGLLYE-LEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHH-HcCchHHHHHHHHHHHH
Confidence 5688888888764 455542 3344444444 47998888876666554
No 121
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=46.40 E-value=46 Score=25.72 Aligned_cols=46 Identities=11% Similarity=0.097 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|..+|++|+.+ .|.+|. ...|.++.|.. +|+.++|+..-++|+.
T Consensus 87 ~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 87 QQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5689999999864 466663 34566666654 8999999876555554
No 122
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=45.29 E-value=1.1e+02 Score=23.85 Aligned_cols=30 Identities=10% Similarity=0.011 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVE 43 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~ 43 (265)
.-+..++.+..+.|+|++++.++.+++ ...
T Consensus 39 ~~~~~~~~~~~~~~~~~~A~~~~~~a~-~~~ 68 (258)
T 3uq3_A 39 TYLNNRAAAEYEKGEYETAISTLNDAV-EQG 68 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHH-HhC
Confidence 345667777777888888888888877 543
No 123
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=45.04 E-value=68 Score=21.58 Aligned_cols=46 Identities=20% Similarity=0.384 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.. .|.++ ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CcCcH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 4567777777653 23332 233344444443 6788888777666654
No 124
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=44.84 E-value=65 Score=23.33 Aligned_cols=46 Identities=22% Similarity=0.218 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+ .|.+ ..+..+.+..++. .|+.++|+...++++.
T Consensus 30 ~~A~~~~~~al~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 75 (166)
T 1a17_A 30 ENAIKFYSQAIEL-----NPSN---AIYYGNRSLAYLR-TECYGYALGDATRAIE 75 (166)
T ss_dssp HHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 4688888888864 2333 3444555555554 7999999988887765
No 125
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=43.91 E-value=52 Score=27.49 Aligned_cols=73 Identities=18% Similarity=0.198 Sum_probs=43.7
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhhHHHHHHHHHHHHHHHHHhHhHHHHhhhc
Q 024620 45 SEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSR 118 (265)
Q Consensus 45 ~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~ 118 (265)
.|+||.|-|.=|..-.|...-..|-+.|-+..--.+. -+...+...+-++-.++.++++..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~-lKk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1dd5_A 102 FPSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKK-IKEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEV 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3789999999999998888888888888774211000 000000001123444566667776666666666654
No 126
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=42.46 E-value=68 Score=24.68 Aligned_cols=46 Identities=15% Similarity=0.124 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+ .|.+| ....|.+..|+. +|+.++|+...++++.
T Consensus 54 ~~A~~~~~~al~~-----~~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 54 TEAEKAFTRSINR-----DKHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----Cccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 5688899999875 24443 445566666665 7999999988887776
No 127
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=42.43 E-value=76 Score=21.34 Aligned_cols=46 Identities=20% Similarity=0.384 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++++.+ .|.+| ....+.+..++. .|+.++|....++++.
T Consensus 60 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 60 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 4678888888764 34443 334555665554 7999999887776654
No 128
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=42.24 E-value=1.4e+02 Score=24.22 Aligned_cols=31 Identities=6% Similarity=0.026 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q 024620 12 REENVYMAKLAEQAERYEEMVEFMEKVSASVE 43 (265)
Q Consensus 12 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~ 43 (265)
-.-+..++.+..+.|+|++.+.++++++ ..+
T Consensus 55 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~-~~~ 85 (327)
T 3cv0_A 55 EEAWRSLGLTQAENEKDGLAIIALNHAR-MLD 85 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH-hcC
Confidence 4556678899999999999999999998 654
No 129
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=42.06 E-value=55 Score=27.35 Aligned_cols=73 Identities=14% Similarity=0.153 Sum_probs=43.0
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhhHHHHHHHHHHHHHHHHHhHhHHHHhhhc
Q 024620 45 SEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSR 118 (265)
Q Consensus 45 ~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~ 118 (265)
.|+||.|-|.=|....|...-..|-+.|-+..--.+.- +...+...+-++-.++.++++..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1ise_A 102 LPPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKV-KALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAA 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHSSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999988888888888887742110000 00000001123444566666666666666666654
No 130
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=42.01 E-value=57 Score=27.21 Aligned_cols=73 Identities=19% Similarity=0.141 Sum_probs=43.3
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhhHHHHHHHHHHHHHHHHHhHhHHHHhhhc
Q 024620 45 SEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSR 118 (265)
Q Consensus 45 ~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~ 118 (265)
.|+||.|-|.=|....|...-..|-+.|-+..--.+.- +...+...+-++-.++.++++..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1is1_A 102 LPPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDL-KALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEV 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999988888888888887742110000 00000001123444566666666666666666654
No 131
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=41.90 E-value=68 Score=24.81 Aligned_cols=46 Identities=9% Similarity=-0.034 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+ .|.++ ...++.+..|+. +|+.++|+...++++.
T Consensus 105 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 150 (198)
T 2fbn_A 105 PKAIDHASKVLKI-----DKNNV---KALYKLGVANMY-FGFLEEAKENLYKAAS 150 (198)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 4688888888875 34443 445566666554 7999999887666654
No 132
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=41.75 E-value=47 Score=28.94 Aligned_cols=54 Identities=20% Similarity=0.270 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHhcC-------CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAEL-------APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L-------~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|..+|++|+.+....- ...+|.+..+.+|.+..|+. +|+.++|+....+|+.
T Consensus 164 ~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 164 KQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 568889999987642110 00124556677788777666 6888888887777643
No 133
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=41.68 E-value=68 Score=25.37 Aligned_cols=31 Identities=13% Similarity=0.188 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q 024620 12 REENVYMAKLAEQAERYEEMVEFMEKVSASVE 43 (265)
Q Consensus 12 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~ 43 (265)
-+.++..+...-+.|+|++.+.++.+++ ..+
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~~ 34 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTI-ALN 34 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHH-HhC
Confidence 3577888888889999999999999998 554
No 134
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=41.35 E-value=38 Score=23.51 Aligned_cols=46 Identities=17% Similarity=0.161 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+. +.|.+ .....+.+..++. .|+.++|+...++++.
T Consensus 33 ~~A~~~~~~al~-----~~~~~---~~~~~~la~~~~~-~~~~~~A~~~~~~a~~ 78 (133)
T 2lni_A 33 PQAMKHYTEAIK-----RNPKD---AKLYSNRAACYTK-LLEFQLALKDCEECIQ 78 (133)
T ss_dssp HHHHHHHHHHHT-----TCTTC---HHHHHHHHHHHTT-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCc---HHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 457888888874 34444 3344555555544 7999999988877765
No 135
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=40.91 E-value=61 Score=27.04 Aligned_cols=69 Identities=20% Similarity=0.159 Sum_probs=42.5
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhh----hhhhcCcchhhHHHHHHHHHHHHHHHHHhHhHHHHhhhc
Q 024620 45 SEELTVEERNLLSVAYKNVIGARRASWRIISSIEQ----KEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSR 118 (265)
Q Consensus 45 ~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eq----k~~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~ 118 (265)
.|+||.|-|.=|..-.|...-..|-+.|-+..--. +....+ .+-++-.++.++++..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1wqg_A 102 VPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEG-----EAGEDEVGRAEKDLDKTTHQYVTQIDEL 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999988888888888887742110 100001 1123444556666666666666666653
No 136
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=40.72 E-value=70 Score=23.94 Aligned_cols=29 Identities=24% Similarity=0.413 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q 024620 14 ENVYMAKLAEQAERYEEMVEFMEKVSASVE 43 (265)
Q Consensus 14 ~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~ 43 (265)
-...+|++..+.|+|++++.++++++ +.+
T Consensus 33 ~~~~la~~y~~~~~~~~A~~~~~~al-~~~ 61 (150)
T 4ga2_A 33 KGFYFAKLYYEAKEYDLAKKYICTYI-NVQ 61 (150)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHH-HHC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH-HhC
Confidence 34578999999999999999999999 765
No 137
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=40.19 E-value=1.4e+02 Score=23.90 Aligned_cols=63 Identities=19% Similarity=0.065 Sum_probs=44.4
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhh---------hhhhhHHHHHHHHHhh
Q 024620 16 VYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNV---------IGARRASWRIISSIEQ 79 (265)
Q Consensus 16 i~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~---------i~~~R~s~R~l~~~eq 79 (265)
..+|.+..+.|+|++++..+++++ ....+.....+-...+..+|.+. .+....+...+..+..
T Consensus 152 ~~la~~~~~~g~~~~A~~~~~~~l-~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~ 223 (261)
T 3qky_A 152 YEAARLYERRELYEAAAVTYEAVF-DAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQ 223 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH-HHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHH-HHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHH
Confidence 678999999999999999999999 55411234556667777777654 2555666666654443
No 138
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=40.10 E-value=41 Score=30.90 Aligned_cols=52 Identities=12% Similarity=0.063 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAEL 217 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~l 217 (265)
+.|...|++|+.. +| ...+-+.|.-|..+..|+.+.|.+.+.++|+.|+..+
T Consensus 63 ~~a~~~~~ral~~--------~p-~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~ 114 (530)
T 2ooe_A 63 DKVEKLFQRCLMK--------VL-HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKI 114 (530)
T ss_dssp HHHHHHHHHHTTT--------CC-CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc--------CC-ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHC
Confidence 5688888888742 23 3457888888999999999999999999999998753
No 139
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=39.84 E-value=2.1e+02 Score=25.63 Aligned_cols=59 Identities=14% Similarity=0.192 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhh-hhHHHHHHH
Q 024620 12 REENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGA-RRASWRIIS 75 (265)
Q Consensus 12 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~-~R~s~R~l~ 75 (265)
.+-+.+++.+..+.|+|++++.+..+++ .++ |. +.+=.+.+..+|... +. ...+...+.
T Consensus 97 ~~a~~~lg~~~~~~g~~~~Al~~~~~al-~l~--P~-~~~a~~~~g~~l~~~-g~d~~eAl~~~~ 156 (382)
T 2h6f_A 97 RDVYDYFRAVLQRDERSERAFKLTRDAI-ELN--AA-NYTVWHFRRVLLKSL-QKDLHEEMNYIT 156 (382)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHH-HHC--TT-CHHHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCChHHHHHHHHHHH-HhC--cc-CHHHHHHHHHHHHHc-ccCHHHHHHHHH
Confidence 3556688888888999999999999999 776 44 344445555555443 32 455555554
No 140
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=39.47 E-value=90 Score=26.00 Aligned_cols=71 Identities=15% Similarity=0.150 Sum_probs=46.3
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhhHHHHHHHHHHHHHHHHHhHhHHHHhhhcc
Q 024620 45 SEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRL 119 (265)
Q Consensus 45 ~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~L 119 (265)
.|+||.|-|.=|....|...-..|-+.|-+..--.+.-.+ .. ++-++-.++.++++..+.+..+.-||..+
T Consensus 104 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk-~~---kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 104 LPPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEE-LE---GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ST---TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc---CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3889999999999999988888888888874211111001 00 02245556677777777777777776543
No 141
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=39.46 E-value=48 Score=30.37 Aligned_cols=53 Identities=15% Similarity=0.194 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHhcCCC--------CCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAP--------THPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~p--------t~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+... .+. .+|.+..+.+|.+..|+. +|+.++|+....+|+.
T Consensus 285 ~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 285 MQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 4688899999876532 110 134667778888888776 7899998888777643
No 142
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=38.92 E-value=92 Score=22.60 Aligned_cols=29 Identities=21% Similarity=0.210 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q 024620 14 ENVYMAKLAEQAERYEEMVEFMEKVSASVE 43 (265)
Q Consensus 14 ~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~ 43 (265)
-+..++.+..+.|+|++++..+++++ ...
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~-~~~ 38 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVY-DAD 38 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTC-CTT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHH-HhC
Confidence 34567888889999999999998887 543
No 143
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=38.21 E-value=1.1e+02 Score=22.10 Aligned_cols=32 Identities=6% Similarity=0.026 Sum_probs=26.4
Q ss_pred ChHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q 024620 11 PREENVYMAKLAEQAERYEEMVEFMEKVSASVE 43 (265)
Q Consensus 11 ~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~ 43 (265)
.-.-+..++.+....|+|++.+.++++++ ...
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~-~~~ 72 (186)
T 3as5_A 41 DVDVALHLGIAYVKTGAVDRGTELLERSL-ADA 72 (186)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHC
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHH-hcC
Confidence 34556788899999999999999999998 554
No 144
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=38.07 E-value=54 Score=27.39 Aligned_cols=73 Identities=21% Similarity=0.173 Sum_probs=44.4
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchhhHHHHHHHHHHHHHHHHHhHhHHHHhhhc
Q 024620 45 SEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSR 118 (265)
Q Consensus 45 ~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~eqk~~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~ 118 (265)
.|+||.|-|.=|....|...-..|-+.|-+..--.+. -+...+...+-++-.++.++++..+.+..+.-||..
T Consensus 103 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~-lKk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~ 175 (185)
T 1eh1_A 103 IPPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDK-LKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQL 175 (185)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3789999999999998888888888888774211100 000000001123444566777777777777666654
No 145
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=37.56 E-value=65 Score=29.81 Aligned_cols=26 Identities=8% Similarity=-0.146 Sum_probs=13.3
Q ss_pred hhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 185 ALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 185 aLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
..|.+.-|+. +|+.++|+...++|+.
T Consensus 77 ~~~lg~~~~~-~g~~~eA~~~~~~al~ 102 (477)
T 1wao_1 77 YYRRAASNMA-LGKFRAALRDYETVVK 102 (477)
T ss_dssp HHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 3344444433 5666666665555443
No 146
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=36.68 E-value=2e+02 Score=24.45 Aligned_cols=30 Identities=10% Similarity=0.216 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVE 43 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~ 43 (265)
+-+..++.+..+.|+|++++.++++++ ..+
T Consensus 68 ~~~~~lg~~~~~~g~~~~A~~~~~~al-~~~ 97 (388)
T 1w3b_A 68 EAYSNLGNVYKERGQLQEAIEHYRHAL-RLK 97 (388)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHH-HHC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHH-HcC
Confidence 445667777777777777777777776 554
No 147
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=36.37 E-value=1e+02 Score=21.14 Aligned_cols=58 Identities=7% Similarity=0.094 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIIS 75 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~ 75 (265)
.-+..++.+..+.|+|++++.++++++ +.+ |... .=...+..+|.. .+..-.+...+.
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al-~~~--p~~~-~a~~~lg~~~~~-~g~~~~A~~~~~ 65 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELV-ETD--PDYV-GTYYHLGKLYER-LDRTDDAIDTYA 65 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-HHS--TTCT-HHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH-HhC--CCcH-HHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 456788999999999999999999999 776 5543 345556666643 344444444443
No 148
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=35.21 E-value=60 Score=27.29 Aligned_cols=51 Identities=16% Similarity=0.064 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHh--cCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024620 160 LTAYKAAQDIANA--ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 214 (265)
Q Consensus 160 ~~aY~~A~~la~~--~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai 214 (265)
..-|++|....+. .+.|.+ .....+.+..|+ -+|+.++|+...++|+.-.-
T Consensus 51 ~~~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 51 MQQPEQALADCRRALELDGQS---VKAHFFLGQCQL-EMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp TTCHHHHHHHHHHHTTSCTTC---HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCc
Confidence 3345666665544 344444 344455555544 47888888888887776543
No 149
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=35.13 E-value=1.4e+02 Score=22.16 Aligned_cols=25 Identities=8% Similarity=0.112 Sum_probs=12.6
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHH
Q 024620 15 NVYMAKLAEQAERYEEMVEFMEKVS 39 (265)
Q Consensus 15 li~~Aklaeq~eRy~Dm~~~mk~~i 39 (265)
+..++.+..+.|+|++.+.++.+++
T Consensus 14 ~~~~g~~~~~~g~~~~A~~~~~~al 38 (164)
T 3sz7_A 14 LKSEGNAAMARKEYSKAIDLYTQAL 38 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3444444455555555555555554
No 150
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=34.15 E-value=1.2e+02 Score=22.69 Aligned_cols=46 Identities=13% Similarity=-0.050 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+. +.|.+|.- ..+.++.++. +|+.++|+...++|+.
T Consensus 38 ~~A~~~~~~al~-----~~p~~~~~---~~~lg~~~~~-~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 38 EDAHXVFQALCV-----LDHYDSRF---FLGLGACRQA-MGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHH-----HCTTCHHH---HHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCcccHHH---HHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 457778887765 45666533 3455555554 7999999888777754
No 151
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=34.06 E-value=1e+02 Score=24.35 Aligned_cols=24 Identities=13% Similarity=-0.015 Sum_probs=14.1
Q ss_pred hHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 187 NFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 187 N~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.+..++. +|+.++|+...++++.
T Consensus 116 ~la~~~~~-~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 116 NRGIALYY-GGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hccHHHHHHHHHHHHH
Confidence 33333333 6777777776666654
No 152
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=32.45 E-value=1.3e+02 Score=21.14 Aligned_cols=53 Identities=15% Similarity=0.024 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
..|..-|+.|+......-. ..+.+-.+..++++-+| -+|+.++|+...+.|+.
T Consensus 22 ~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHh
Confidence 3578889999887643211 12334444455555555 58999999998887764
No 153
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=32.35 E-value=71 Score=26.88 Aligned_cols=47 Identities=9% Similarity=0.075 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 156 AESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 156 ~~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
.+.|...|++|+++ +|-...+-++++.|+.. +|+.++|+.+-.+|+.
T Consensus 185 ~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~-~g~~~~A~~~~~~al~ 231 (308)
T 2ond_A 185 KSVAFKIFELGLKK--------YGDIPEYVLAYIDYLSH-LNEDNNTRVLFERVLT 231 (308)
T ss_dssp HHHHHHHHHHHHHH--------HTTCHHHHHHHHHHHHT-TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
No 154
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=32.13 E-value=1.2e+02 Score=20.81 Aligned_cols=61 Identities=10% Similarity=0.110 Sum_probs=42.9
Q ss_pred ChHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 024620 11 PREENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISS 76 (265)
Q Consensus 11 ~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~ 76 (265)
.-.-+..++.+....|+|++.+.++++++ ..+ +. ..+-...+..+|.. .+....+...+..
T Consensus 18 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al-~~~--p~-~~~~~~~la~~~~~-~g~~~~A~~~~~~ 78 (115)
T 2kat_A 18 NMLLRFTLGKTYAEHEQFDAALPHLRAAL-DFD--PT-YSVAWKWLGKTLQG-QGDRAGARQAWES 78 (115)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHC--TT-CHHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHH-HHC--CC-cHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 34566788999999999999999999999 665 43 34455666666654 3555555555543
No 155
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=31.94 E-value=1.3e+02 Score=25.07 Aligned_cols=53 Identities=13% Similarity=-0.154 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHH-hCChHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEI-LNSPDRACNLAKQAFDE 212 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi-~~~~~~A~~iAk~afd~ 212 (265)
+.|..+|++|+++... + -+|...+-+++----.|.- +|++++|+..-++|+.-
T Consensus 94 ~~A~~~~~~Al~l~~~-~--g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~ 147 (292)
T 1qqe_A 94 VNAVDSLENAIQIFTH-R--GQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEW 147 (292)
T ss_dssp HHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-c--CCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 5689999999998754 2 2444444455443334445 59999999888877653
No 156
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=31.38 E-value=1.6e+02 Score=28.43 Aligned_cols=53 Identities=21% Similarity=0.034 Sum_probs=35.1
Q ss_pred hhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCC-cchHHHhhhHHHHHHHHhC
Q 024620 143 LAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTH-PIRLGLALNFSVFYYEILN 197 (265)
Q Consensus 143 laE~~~~~~~~~~~~~A~~aY~~A~~la~~~L~pt~-pirLgLaLN~SVF~yEi~~ 197 (265)
.||....+.-.+++++|.++|++|++..++ +..|+ |--.-..||- +-.||..|
T Consensus 435 k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k-~~~tdd~~~v~~~~~~-ak~yE~aG 488 (526)
T 2wb7_A 435 KAKGMNNENAIEYAQGAIDEYKAAINDLQK-AAQQDDYQMFLNYLNA-AKKHEMAG 488 (526)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSHHHHHHHHHH-HHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHH-hhhhhhcc
Confidence 366666777778899999999999999875 55444 4333334443 33466544
No 157
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=30.70 E-value=1.5e+02 Score=21.22 Aligned_cols=46 Identities=13% Similarity=-0.013 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+ .|.+| ..-.+.++.+.. +|+.++|+...++|+.
T Consensus 34 ~~A~~~~~~al~~-----~P~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 79 (121)
T 1hxi_A 34 AEAALAFEAVCQK-----EPERE---EAWRSLGLTQAE-NEKDGLAIIALNHARM 79 (121)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 4678888888753 44444 233444554444 7998888876665544
No 158
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=30.70 E-value=1.2e+02 Score=20.32 Aligned_cols=46 Identities=20% Similarity=0.345 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++++.. .|.+| ....+.+..++ -.|+.++|+....+++.
T Consensus 52 ~~A~~~~~~~~~~-----~~~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~~~~ 97 (136)
T 2fo7_A 52 DEAIEYYQKALEL-----DPRSA---EAWYNLGNAYY-KQGDYDEAIEYYQKALE 97 (136)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-TTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCch---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 4577778777654 23333 22334444444 47888888887776654
No 159
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=30.32 E-value=1.1e+02 Score=29.11 Aligned_cols=68 Identities=19% Similarity=0.271 Sum_probs=39.9
Q ss_pred hccccchhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHhhhH------HHHHHH----HhCChHHHHHH
Q 024620 136 KGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNF------SVFYYE----ILNSPDRACNL 205 (265)
Q Consensus 136 kgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~------SVF~yE----i~~~~~~A~~i 205 (265)
-||..||...+ ..|...|.+|..+.=..=. .-..||+.-.+ +||||- +..-...|..=
T Consensus 158 LGDL~RY~~~~----------~~A~~~Y~~A~~~~P~~G~--~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~n 225 (497)
T 1ya0_A 158 LGDIARYRNQT----------SQAESYYRHAAQLVPSNGQ--PYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTN 225 (497)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHCTTBSH--HHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHH
T ss_pred cccHHHHHHHH----------HHHHHHHHHHHHhCCCCCc--hHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHH
Confidence 69999999764 4789999999875311111 11466665554 677774 12233344444
Q ss_pred HHHHHHHHHH
Q 024620 206 AKQAFDEAIA 215 (265)
Q Consensus 206 Ak~afd~Ai~ 215 (265)
-...|+.+.+
T Consensus 226 L~~~f~~~~~ 235 (497)
T 1ya0_A 226 LQKALSKALE 235 (497)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 4455555433
No 160
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=29.84 E-value=1.6e+02 Score=23.19 Aligned_cols=49 Identities=16% Similarity=0.186 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++++. ..|.+|..-...++.+..|+. .|+.++|+...++++.
T Consensus 21 ~~A~~~~~~~~~-----~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 21 RQAITQLEALDN-----RYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 457777877765 356677555555555555554 7999999876666553
No 161
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=29.25 E-value=1e+02 Score=23.65 Aligned_cols=53 Identities=11% Similarity=0.013 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHhcC--------CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAEL--------APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 210 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L--------~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~af 210 (265)
+.|...|++|+++...+- ...+|-......|.+..++. +|+.++|+...++++
T Consensus 88 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al 148 (213)
T 1hh8_A 88 DLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALAT 148 (213)
T ss_dssp HHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHH
Confidence 568889999886532100 00234444566677776665 799999887666554
No 162
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=29.21 E-value=2.5e+02 Score=23.42 Aligned_cols=53 Identities=11% Similarity=0.007 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchH-HHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRL-GLALNFSVFYYEILNSPDRACNLAKQAFDEA 213 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirL-gLaLN~SVF~yEi~~~~~~A~~iAk~afd~A 213 (265)
+.|...|++|+++... . .+|... ....|.+.+|.. +|+.++|+...++++.-.
T Consensus 132 ~~A~~~~~~Al~~~~~-~--~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 132 SKAVHLYQQAAAVFEN-E--ERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSMY 185 (307)
T ss_dssp HHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-C--CChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 5799999999998864 2 133333 344566666655 799999998888776643
No 163
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=29.13 E-value=2.1e+02 Score=22.52 Aligned_cols=64 Identities=13% Similarity=0.016 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHh
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISSIE 78 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~~e 78 (265)
+.+..+|...-+.|+|++++..+.+++ ......+...+-...+..+|-. .+....+...+..+.
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~-~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l 68 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALD-NRYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFI 68 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHH-HHCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH-HhCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHH
Confidence 456678888889999999999999999 5430022334444555555432 355566666665443
No 164
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=28.62 E-value=1.5e+02 Score=20.66 Aligned_cols=50 Identities=18% Similarity=0.160 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA 215 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~ 215 (265)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++...-.
T Consensus 60 ~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 60 EQALADCRRALEL-----DGQSV---KAHFFLGQCQLE-MESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CchhH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHHChh
Confidence 4588888888864 34443 345555655555 79999999988888876543
No 165
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=28.61 E-value=1.8e+02 Score=21.44 Aligned_cols=70 Identities=7% Similarity=-0.106 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLR 236 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLr 236 (265)
+.|...|++|+.+ .|.+| ...++.+..|+. +|+.++|+...++|+.- +.++-......+..++
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~l--------~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLRN--------HPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH--------CGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHH
Confidence 4678888888765 45554 344455555554 79999998776665543 2222224445555555
Q ss_pred hhHhhhh
Q 024620 237 DNLTLWT 243 (265)
Q Consensus 237 DNL~lW~ 243 (265)
.-+..+.
T Consensus 143 ~~~~~~~ 149 (162)
T 3rkv_A 143 ERRAEKK 149 (162)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 5554443
No 166
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=28.53 E-value=28 Score=31.28 Aligned_cols=39 Identities=28% Similarity=0.475 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHH-hhhHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGL-ALNFSVFYYEI 195 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgL-aLN~SVF~yEi 195 (265)
++.++|-++|+.+|...+.|.-++.|=+ +||..+|||+.
T Consensus 212 krVleCLqkaLkiA~~~~d~~~~v~LfveILn~ylyff~~ 251 (298)
T 2r17_C 212 KRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFYEK 251 (298)
T ss_dssp HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHhhhhC
Confidence 5789999999999998776544333333 89999999985
No 167
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=27.48 E-value=1.3e+02 Score=22.44 Aligned_cols=47 Identities=15% Similarity=0.241 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCCh--HHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSP--DRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~--~~A~~iAk~afd 211 (265)
+.|..+|++|+.+. |.+| ....+++..+|.-.|+. ++|+...++++.
T Consensus 61 ~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~ 109 (177)
T 2e2e_A 61 SNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALA 109 (177)
T ss_dssp HHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence 56889999998754 3444 34456666655557887 888887777654
No 168
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=26.72 E-value=2e+02 Score=21.50 Aligned_cols=36 Identities=25% Similarity=0.296 Sum_probs=25.5
Q ss_pred HHHHHHHHh---cCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhh
Q 024620 17 YMAKLAEQA---ERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGA 66 (265)
Q Consensus 17 ~~Aklaeq~---eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~ 66 (265)
+.-+.|+.+ |||||.|+|-++.+ .+|+-|+|.+-+.
T Consensus 17 ~~~RrAe~ll~~gkydeAIech~kAa--------------~yL~eAmkltqs~ 55 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCHRKAT--------------TYLSEAMKLTESE 55 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH--------------HHHHHHHTTCCCH
T ss_pred HhhhHHHHHHhcCCHHHHHHHHHHHH--------------HHHHHHHHhhccH
Confidence 444556655 99999999998877 3566677776443
No 169
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=26.59 E-value=3.4e+02 Score=24.12 Aligned_cols=49 Identities=6% Similarity=0.074 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhh
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIG 65 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~ 65 (265)
.-+..++.+..+.|+|++.+.++.+++ ..+ +. +..=.+-+..+|...-+
T Consensus 201 ~a~~~lg~~~~~~g~~~eAl~~~~~al-~l~--P~-~~~a~~~lg~~l~~l~~ 249 (382)
T 2h6f_A 201 HAWQHRQWVIQEFKLWDNELQYVDQLL-KED--VR-NNSVWNQRYFVISNTTG 249 (382)
T ss_dssp HHHHHHHHHHHHHTCCTTHHHHHHHHH-HHC--TT-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHH-HhC--CC-CHHHHHHHHHHHHHhcC
Confidence 344566677777777777777777777 554 33 34445555555555433
No 170
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=26.27 E-value=1.4e+02 Score=25.68 Aligned_cols=46 Identities=7% Similarity=-0.013 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|..+|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.
T Consensus 213 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 258 (336)
T 1p5q_A 213 SAAIESCNKALEL-----DSNNE---KGLSRRGEAHLA-VNDFELARADFQKVLQ 258 (336)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 4577777777764 33443 233444554444 6787777776666554
No 171
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=25.92 E-value=1.4e+02 Score=19.48 Aligned_cols=24 Identities=25% Similarity=0.335 Sum_probs=13.0
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHH
Q 024620 16 VYMAKLAEQAERYEEMVEFMEKVS 39 (265)
Q Consensus 16 i~~Aklaeq~eRy~Dm~~~mk~~i 39 (265)
..++.+..+.|+|++.+.++++++
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~ 33 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAI 33 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHH
Confidence 344555555555555555555555
No 172
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=25.75 E-value=3e+02 Score=23.20 Aligned_cols=46 Identities=17% Similarity=0.183 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHh
Q 024620 12 REENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYK 61 (265)
Q Consensus 12 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayK 61 (265)
-.-+..++.+.-+.+++++.+.+.+.++ ..+ | -+.+-...+..+|.
T Consensus 33 ~~~~~~l~~~~~~~~~~~~a~~~~~~a~-~~~--p-~~~~~~~~lg~~~~ 78 (388)
T 1w3b_A 33 TGVLLLLSSIHFQCRRLDRSAHFSTLAI-KQN--P-LLAEAYSNLGNVYK 78 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHC--T-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH-hcC--C-CchHHHHHHHHHHH
Confidence 4556778888999999999999999988 554 3 34555566655553
No 173
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=24.80 E-value=2.9e+02 Score=26.59 Aligned_cols=73 Identities=21% Similarity=0.367 Sum_probs=47.9
Q ss_pred cCHHHHHHHHHHHHhhcCCCCCCCHH---HHHHHHHH---HhhhhhhhhHHHHHHHHHhhhhhhcCcchhhHHHHHHHHH
Q 024620 26 ERYEEMVEFMEKVSASVESSEELTVE---ERNLLSVA---YKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSK 99 (265)
Q Consensus 26 eRy~Dm~~~mk~~i~~~~~~~eLt~e---ERnLlSva---yKn~i~~~R~s~R~l~~~eqk~~~~~~~~~~~~i~~yr~k 99 (265)
++|..-++-+++++ ... .....+ |-.+|-.| |..++..-+..+..|..--++|.......-.+++..||.+
T Consensus 121 ~k~g~~l~~v~~~~-~~~--~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~kE~~~Rt~dE~~mi~~yr~k 197 (526)
T 3iyk_A 121 EKFGKELEEVYNFM-NGE--ANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRDK 197 (526)
T ss_pred HHHHHHHHHHHHHH-HHh--hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence 55667777777777 322 334443 44566655 5577788888888888777777644444556778888877
Q ss_pred HH
Q 024620 100 IE 101 (265)
Q Consensus 100 ie 101 (265)
+.
T Consensus 198 ~~ 199 (526)
T 3iyk_A 198 ID 199 (526)
T ss_pred HH
Confidence 64
No 174
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=24.58 E-value=2.2e+02 Score=21.29 Aligned_cols=31 Identities=26% Similarity=0.192 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q 024620 12 REENVYMAKLAEQAERYEEMVEFMEKVSASVE 43 (265)
Q Consensus 12 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~ 43 (265)
-+-+..++.+..+.|+|++.+.++.+++ ..+
T Consensus 108 ~~~~~~la~~~~~~g~~~~A~~~~~~~l-~~~ 138 (176)
T 2r5s_A 108 FELACELAVQYNQVGRDEEALELLWNIL-KVN 138 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH-TTC
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHH-HhC
Confidence 3556677788888888888888888877 555
No 175
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=24.30 E-value=1.1e+02 Score=20.27 Aligned_cols=23 Identities=13% Similarity=0.036 Sum_probs=12.4
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHH
Q 024620 17 YMAKLAEQAERYEEMVEFMEKVS 39 (265)
Q Consensus 17 ~~Aklaeq~eRy~Dm~~~mk~~i 39 (265)
.+|...-+.|+|++.+..+++++
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al 27 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFL 27 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHH
Confidence 34444555555555555555555
No 176
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=24.10 E-value=1.4e+02 Score=29.66 Aligned_cols=46 Identities=17% Similarity=0.218 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|.++|++|+++ .|.++ ....|.+..|++ +|+.++|+...++|+.
T Consensus 94 ~~A~~~~~kAl~l-----~P~~~---~a~~~Lg~~~~~-~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 94 QGALQCYTRAIQI-----NPAFA---DAHSNLASIHKD-SGNIPEAIASYRTALK 139 (723)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5689999999875 34443 445566666665 7999999988888765
No 177
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=24.01 E-value=63 Score=28.19 Aligned_cols=49 Identities=16% Similarity=0.176 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCc--------------chHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024620 157 ESTLTAYKAAQDIANAELAPTHP--------------IRLGLALNFSVFYYEILNSPDRACNLAKQAFD 211 (265)
Q Consensus 157 ~~A~~aY~~A~~la~~~L~pt~p--------------irLgLaLN~SVF~yEi~~~~~~A~~iAk~afd 211 (265)
+.|...|++|+.+. |.++ ++..+.+|.+..|+. +|+.++|+....+|+.
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 45788888888653 2232 122366788877765 7999999998888764
No 178
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=23.94 E-value=1e+02 Score=20.53 Aligned_cols=25 Identities=8% Similarity=0.037 Sum_probs=14.5
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHH
Q 024620 15 NVYMAKLAEQAERYEEMVEFMEKVS 39 (265)
Q Consensus 15 li~~Aklaeq~eRy~Dm~~~mk~~i 39 (265)
+..++.+..+.|+|++++.++.+++
T Consensus 41 ~~~lg~~~~~~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 41 YSNKAMALIKLGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 4455555555566666666666655
No 179
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=23.49 E-value=2.4e+02 Score=21.37 Aligned_cols=57 Identities=14% Similarity=0.005 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHH
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRII 74 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l 74 (265)
+.+..++....+.|+|++.+.++++++ ..+ | -+.+=...|..+|-. .+....|...+
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al-~~~--P-~~~~~~~~lg~~~~~-~g~~~~Ai~~~ 93 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLC-IYD--F-YNVDYIMGLAAIYQI-KEQFQQAADLY 93 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-HHC--T-TCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH-HhC--C-CCHHHHHHHHHHHHH-HccHHHHHHHH
Confidence 456677777777888888888888877 554 3 345555555555532 23333444433
No 180
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=23.14 E-value=1.7e+02 Score=19.50 Aligned_cols=28 Identities=14% Similarity=0.296 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q 024620 15 NVYMAKLAEQAERYEEMVEFMEKVSASVE 43 (265)
Q Consensus 15 li~~Aklaeq~eRy~Dm~~~mk~~i~~~~ 43 (265)
+..++.+....|+|++.+..+++++ ..+
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~-~~~ 31 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKAL-ELD 31 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHH-HHC
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHH-HcC
Confidence 4567888888999999999999988 554
No 181
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=23.09 E-value=2.6e+02 Score=21.57 Aligned_cols=60 Identities=10% Similarity=0.150 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 024620 12 REENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISS 76 (265)
Q Consensus 12 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~ 76 (265)
-.-+..++.+..+.|+|++++.++.+++ ..+ |. ...=...+..+|.. .+....+...+..
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~al-~~~--p~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~ 101 (228)
T 4i17_A 42 SVTAYNCGVCADNIKKYKEAADYFDIAI-KKN--YN-LANAYIGKSAAYRD-MKNNQEYIATLTE 101 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH-HTT--CS-HHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhcHHHHHHHHHHHH-HhC--cc-hHHHHHHHHHHHHH-cccHHHHHHHHHH
Confidence 3456678899999999999999999998 665 44 33444455555543 2445555555543
No 182
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=21.93 E-value=1.2e+02 Score=22.83 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=27.5
Q ss_pred cCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhh
Q 024620 26 ERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVI 64 (265)
Q Consensus 26 eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i 64 (265)
++|+.++..++.+- ..+. ..++.+++-.|---||...
T Consensus 10 ~~F~~A~~~vk~l~-~~g~-~~ps~e~~L~LYaLyKQAt 46 (106)
T 2wh5_A 10 KQFQAAVSVIQNLP-KNGS-YRPSYEEMLRFYSYYKQAT 46 (106)
T ss_dssp HHHHHHHHHHHHSC-SSCS-CCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc-ccCC-CCCCHHHHHHHHHHHhhhc
Confidence 56888898888765 3220 3689999998888888664
No 183
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=21.93 E-value=4.6e+02 Score=23.93 Aligned_cols=31 Identities=3% Similarity=-0.169 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q 024620 12 REENVYMAKLAEQAERYEEMVEFMEKVSASVE 43 (265)
Q Consensus 12 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~ 43 (265)
-+-+..++.+..+.|+|++++.++++.+ +.+
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al-~~~ 53 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGL-ALH 53 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHH-TTS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH-HhC
Confidence 4566788899999999999999999998 665
No 184
>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}
Probab=20.87 E-value=3e+02 Score=21.37 Aligned_cols=75 Identities=17% Similarity=0.155 Sum_probs=36.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHh-----cCCCCCcchHHHhhhH-----HHH----HHHHhCChHHHHHHHHHHHHHH
Q 024620 148 TGAERKEAAESTLTAYKAAQDIANA-----ELAPTHPIRLGLALNF-----SVF----YYEILNSPDRACNLAKQAFDEA 213 (265)
Q Consensus 148 ~~~~~~~~~~~A~~aY~~A~~la~~-----~L~pt~pirLgLaLN~-----SVF----~yEi~~~~~~A~~iAk~afd~A 213 (265)
+.+-+..+.+.+.+..+.+.++... .-|+++|.-.|-+-.. |.| -..++.....+=+.+..+|++|
T Consensus 39 d~~lk~~f~~~a~~~~~~~~eL~~~i~~lGg~p~~~~s~~g~~hr~~~~lks~~~~~~~~~iL~~~~~gE~~~~~~Y~~a 118 (153)
T 4etr_A 39 DPQLKAAMLEQSRDCAAAADELERIVLELGGKPKDSTSFAGDLHRRWVDLKSLVTGKDEEAVLNECERGEDVAKHRYQAA 118 (153)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC-------------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445555566666666655532 2355555444432221 122 2346666777778899999999
Q ss_pred HHhhcccCccc
Q 024620 214 IAELDTLGEES 224 (265)
Q Consensus 214 i~~ld~l~ee~ 224 (265)
+.. .++.+.
T Consensus 119 l~~--~lp~~~ 127 (153)
T 4etr_A 119 LEK--SLPAEI 127 (153)
T ss_dssp HHS--CCCHHH
T ss_pred Hhc--cCCHHH
Confidence 984 355443
No 185
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=20.37 E-value=2.4e+02 Score=20.03 Aligned_cols=59 Identities=14% Similarity=0.014 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASVESSEELTVEERNLLSVAYKNVIGARRASWRIISS 76 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~eLt~eERnLlSvayKn~i~~~R~s~R~l~~ 76 (265)
.....++...-+.|+|++.+..+++++ ..+ |. +.+=...+..+|-. .+....+...+..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al-~~~--P~-~~~a~~~lg~~~~~-~g~~~~A~~~~~~ 76 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVC-QKE--PE-REEAWRSLGLTQAE-NEKDGLAIIALNH 76 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHH-HHS--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHH-HHC--CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 456788888889999999999999998 654 43 56666677776653 3445555555543
No 186
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=20.36 E-value=73 Score=23.73 Aligned_cols=60 Identities=12% Similarity=0.266 Sum_probs=36.3
Q ss_pred CchhhHHhhhhccccchhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHH----HhhhHHHHH
Q 024620 126 GDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLG----LALNFSVFY 192 (265)
Q Consensus 126 ~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~la~~~L~pt~pirLg----LaLN~SVF~ 192 (265)
+.+.+|+ .|+.--||-.+...-+ .-+....+..+.|++--+ ..|.||..|+ +.-+|++|+
T Consensus 4 ~~~~~~~---~~~~~~~Ld~vs~~f~--~~a~~~~~~l~~Al~~L~--~~psNPa~LAe~Qa~lseynl~R 67 (92)
T 2g0u_A 4 PPTPLLA---DYEWSGYLTGIGRAFD--DGVKDLNKQLQDAQANLT--KNPSDPTALANYQMIMSEYNLYR 67 (92)
T ss_dssp CCCCCTT---SSSSTHHHHHHHGGGC--TTTHHHHHHHHHHHHHHH--HSTTCHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHh---cCcccchHHHHHHHHH--HHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH
Confidence 3455666 3455557766643311 123456677777776433 6899999997 456677664
No 187
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=20.06 E-value=2.5e+02 Score=20.17 Aligned_cols=29 Identities=10% Similarity=0.172 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Q 024620 13 EENVYMAKLAEQAERYEEMVEFMEKVSASV 42 (265)
Q Consensus 13 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~ 42 (265)
+.+..+|....+.|+|++.+.++++++ ..
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al-~~ 47 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALC-ML 47 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHH-Hh
Confidence 344456666666677777777777666 44
Done!