Query 024622
Match_columns 265
No_of_seqs 214 out of 2078
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 06:07:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024622.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024622hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02250 lipid phosphate phosp 100.0 7.9E-55 1.7E-59 381.7 27.2 255 1-255 2-257 (314)
2 PLN02715 lipid phosphate phosp 100.0 2.1E-54 4.6E-59 380.0 26.7 254 2-255 28-281 (327)
3 PLN02731 Putative lipid phosph 100.0 5.6E-54 1.2E-58 377.2 24.5 254 2-255 22-275 (333)
4 KOG3030 Lipid phosphate phosph 100.0 4.1E-47 8.8E-52 332.2 23.2 247 6-255 2-274 (317)
5 cd03390 PAP2_containing_1_like 100.0 1.9E-36 4.2E-41 251.8 18.0 189 54-242 1-193 (193)
6 cd03384 PAP2_wunen PAP2, wunen 100.0 8.4E-31 1.8E-35 209.1 12.8 138 98-237 5-148 (150)
7 cd03396 PAP2_like_6 PAP2_like_ 99.9 6.4E-24 1.4E-28 177.1 17.2 135 92-241 62-196 (197)
8 cd03382 PAP2_dolichyldiphospha 99.9 3.9E-22 8.5E-27 160.7 17.4 116 99-239 44-159 (159)
9 cd03392 PAP2_like_2 PAP2_like_ 99.9 4.1E-22 8.9E-27 164.2 17.3 117 99-243 64-180 (182)
10 PRK10699 phosphatidylglyceroph 99.9 4.7E-22 1E-26 168.7 17.5 147 86-242 66-230 (244)
11 cd03389 PAP2_lipid_A_1_phospha 99.9 4.6E-22 1E-26 164.3 16.8 116 98-241 70-185 (186)
12 cd03391 PAP2_containing_2_like 99.9 8.1E-22 1.7E-26 158.8 16.3 111 97-237 47-157 (159)
13 cd03385 PAP2_BcrC_like PAP2_li 99.9 1E-21 2.3E-26 155.9 15.7 109 99-239 35-143 (144)
14 cd03383 PAP2_diacylglycerolkin 99.9 1.1E-21 2.4E-26 147.5 13.4 95 103-241 14-108 (109)
15 cd03388 PAP2_SPPase1 PAP2_like 99.9 3.2E-21 7E-26 154.2 15.8 112 102-237 38-149 (151)
16 cd03395 PAP2_like_4 PAP2_like_ 99.9 4.4E-21 9.5E-26 157.4 16.7 111 104-242 64-174 (177)
17 PRK09597 lipid A 1-phosphatase 99.9 3E-20 6.5E-25 150.9 20.2 159 36-242 30-188 (190)
18 cd03394 PAP2_like_5 PAP2_like_ 99.9 1.2E-21 2.5E-26 147.6 10.9 101 99-238 5-105 (106)
19 cd03393 PAP2_like_3 PAP2_like_ 99.9 7.1E-21 1.5E-25 147.5 14.6 109 100-238 16-124 (125)
20 PRK11837 undecaprenyl pyrophos 99.8 6.5E-20 1.4E-24 153.0 17.6 110 97-238 59-168 (202)
21 smart00014 acidPPc Acid phosph 99.8 2.9E-20 6.2E-25 142.1 12.5 111 105-237 3-114 (116)
22 PLN02525 phosphatidic acid pho 99.8 3.1E-19 6.6E-24 159.6 16.5 122 102-239 40-161 (352)
23 cd03381 PAP2_glucose_6_phospha 99.8 5.4E-19 1.2E-23 149.8 15.7 134 102-241 20-153 (235)
24 PF01569 PAP2: PAP2 superfamil 99.8 2.9E-20 6.3E-25 144.1 3.3 125 99-244 2-126 (129)
25 cd01610 PAP2_like PAP2_like pr 99.7 4.3E-17 9.3E-22 124.4 14.2 113 103-238 9-121 (122)
26 COG0671 PgpB Membrane-associat 99.7 8.4E-16 1.8E-20 128.8 15.9 120 99-245 93-214 (232)
27 cd03380 PAP2_like_1 PAP2_like_ 99.7 6.1E-16 1.3E-20 130.2 13.6 112 99-237 95-206 (209)
28 cd03397 PAP2_acid_phosphatase 99.7 6.7E-16 1.5E-20 131.7 13.8 100 111-238 115-214 (232)
29 KOG4268 Uncharacterized conser 99.6 5.3E-15 1.1E-19 114.5 11.6 120 97-245 64-183 (189)
30 KOG3146 Dolichyl pyrophosphate 99.5 4.2E-13 9.2E-18 109.1 16.1 154 76-261 36-192 (228)
31 cd03398 PAP2_haloperoxidase PA 99.5 3.9E-13 8.5E-18 114.9 13.1 136 97-238 86-230 (232)
32 cd03386 PAP2_Aur1_like PAP2_li 99.4 4.7E-12 1E-16 104.7 15.8 74 153-240 111-184 (186)
33 COG3907 PAP2 (acid phosphatase 99.4 1.1E-11 2.3E-16 100.1 15.1 179 54-247 60-242 (249)
34 KOG2822 Sphingoid base-phospha 99.1 6.1E-10 1.3E-14 98.2 10.8 130 107-256 121-252 (407)
35 PF14378 PAP2_3: PAP2 superfam 98.6 2.8E-06 6.2E-11 70.4 14.3 68 155-235 122-189 (191)
36 PF14360 PAP2_C: PAP2 superfam 97.0 0.0043 9.2E-08 43.2 7.4 64 161-235 6-69 (74)
37 COG1963 Uncharacterized protei 96.8 0.049 1.1E-06 42.4 12.1 27 217-243 126-152 (153)
38 PF02681 DUF212: Divergent PAP 96.1 0.033 7.3E-07 43.6 7.5 22 157-178 39-60 (141)
39 KOG3058 Uncharacterized conser 94.6 1.1 2.4E-05 40.3 12.8 123 110-244 154-282 (351)
40 PRK10726 hypothetical protein; 67.6 47 0.001 24.5 8.9 84 154-237 15-98 (105)
41 PF10261 Scs3p: Inositol phosp 65.4 17 0.00037 31.1 5.7 25 215-239 214-238 (238)
42 PF12084 DUF3561: Protein of u 63.2 59 0.0013 24.0 8.2 85 153-237 17-101 (107)
43 KOG3750 Inositol phospholipid 62.0 28 0.0006 30.2 6.2 30 215-244 218-247 (270)
44 PF11143 DUF2919: Protein of u 54.1 70 0.0015 25.3 6.9 78 2-93 3-80 (149)
45 PF13373 DUF2407_C: DUF2407 C- 39.7 44 0.00096 26.2 3.7 30 215-244 83-113 (140)
46 PF06295 DUF1043: Protein of u 39.1 34 0.00074 26.3 3.0 25 224-248 2-26 (128)
47 PRK10862 SoxR reducing system 38.9 1.1E+02 0.0024 24.2 6.0 33 225-257 107-139 (154)
48 PF05297 Herpes_LMP1: Herpesvi 36.8 11 0.00025 33.0 0.0 55 192-246 135-189 (381)
49 PLN02248 cellulose synthase-li 34.9 5.9E+02 0.013 27.2 14.0 55 201-256 1045-1100(1135)
50 COG5336 Uncharacterized protei 29.0 75 0.0016 23.8 3.1 41 201-241 54-94 (116)
51 PF14316 DUF4381: Domain of un 25.5 3.2E+02 0.007 21.1 6.8 32 94-125 49-86 (146)
52 PRK11281 hypothetical protein; 23.9 8.9E+02 0.019 26.0 10.9 20 210-230 638-657 (1113)
53 TIGR02916 PEP_his_kin putative 23.0 6.5E+02 0.014 24.8 9.6 73 164-240 2-75 (679)
54 PRK11677 hypothetical protein; 21.9 95 0.0021 24.1 2.8 22 224-245 6-27 (134)
55 COG3086 RseC Positive regulato 21.6 3.2E+02 0.007 21.6 5.6 32 224-255 106-137 (150)
56 PF04238 DUF420: Protein of un 21.1 4E+02 0.0086 20.6 10.6 45 82-126 20-64 (133)
No 1
>PLN02250 lipid phosphate phosphatase
Probab=100.00 E-value=7.9e-55 Score=381.66 Aligned_cols=255 Identities=71% Similarity=1.355 Sum_probs=237.5
Q ss_pred CCcccCcccccccchhhhhhhhHHHHHHHHHHHHHHHHhhcCCccccccCCccccCCCCCCCCCcchhhHHHHHHHHHHH
Q 024622 1 MDVQFGSHTLRSHGVVVARKHMHDWLIFLFLVVMDIILNAIDPFYRFVGKDMMTDLKYPFKNNTVPVWAVPVYAVLVPVI 80 (265)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~p~~~~~i~~~~l~~~~~~~p~~ 80 (265)
++.|+|.|+.++|+.++.++++.||+++++++++..++..++|++|++.++++++++||++++++|.+++.++++++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~Dwii~i~l~~i~~i~~~i~Pf~r~~~~~~~~~i~yP~~~~tVp~~~l~ii~~~iP~~ 81 (314)
T PLN02250 2 PEIQLGAHTIRSHGVKVARTHMHDWLILLLLVVIEVVLNVIEPFHRFVGKDMLTDLSYPLQDNTIPFWAVPLIAILLPFA 81 (314)
T ss_pred CcccccccchhccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCcchhhccCCCCCCeecHHHHHHHHHHHHHH
Confidence 35699999999999999999999999999999999999999999998888777789999999999999999999999999
Q ss_pred HHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCc-ccccccCCccccccCCC
Q 024622 81 IFLIVYYHRRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQF-NNVICHGDKHVVNEGHK 159 (265)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~-~~~~c~~~~~~~~~~~~ 159 (265)
++++++..+++.+++++..++++++++++.++++++|..+|||||+++++|+|++...++.. .+..|++++..++++++
T Consensus 82 vilv~~~~r~~~~~l~~~~l~ll~sv~~t~lit~~lK~~vGRpRPdfl~rC~P~~~~~~~~~~~~~~Ctg~~~~l~dg~~ 161 (314)
T PLN02250 82 VILVYYFIRRDVYDLHHAILGLLFSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFHPVTTDVLCTGAKSVIKEGHK 161 (314)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCChhhhcCccccccccccccceeecCCcccccccCC
Confidence 99998888888889999999999999999999999999999999999999999987655444 66789988888899999
Q ss_pred CCCChhHHHHHHHHHHHHHHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHH
Q 024622 160 SFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCY 239 (265)
Q Consensus 160 SFPSGHas~a~~~~~~l~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~ 239 (265)
|||||||+.++++++++++|+..+++.++++++.+|.++.++++++++++|+||++||+||++||++|+++|.++++++|
T Consensus 162 SFPSGHSS~afa~~~fLslyL~~kl~~~~~~~~~~r~~l~~lpll~A~lVa~SRI~dy~Hh~sDVlaG~lIG~~~A~~~y 241 (314)
T PLN02250 162 SFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPLLVAALVGVSRVDDYWHHWQDVFAGALIGLTVASFCY 241 (314)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988777777888988899999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCCCcccc
Q 024622 240 LQFFPPPYHAEGTVQV 255 (265)
Q Consensus 240 ~~~~~~~~~~~~~~~~ 255 (265)
+.+|+++.++++|.|+
T Consensus 242 ~~~fp~~~~~~~~~p~ 257 (314)
T PLN02250 242 LQFFPPPYDIDGWGPH 257 (314)
T ss_pred HHHcCCcccCCCCCcc
Confidence 9999999999999996
No 2
>PLN02715 lipid phosphate phosphatase
Probab=100.00 E-value=2.1e-54 Score=380.00 Aligned_cols=254 Identities=69% Similarity=1.310 Sum_probs=237.3
Q ss_pred CcccCcccccccchhhhhhhhHHHHHHHHHHHHHHHHhhcCCccccccCCccccCCCCCCCCCcchhhHHHHHHHHHHHH
Q 024622 2 DVQFGSHTLRSHGVVVARKHMHDWLIFLFLVVMDIILNAIDPFYRFVGKDMMTDLKYPFKNNTVPVWAVPVYAVLVPVII 81 (265)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~d~i~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~p~~~~~i~~~~l~~~~~~~p~~~ 81 (265)
+.|+|.|++++|+.++.++++.||+++++++++..++..++|++|.+..+++++++||++++++|.+++.++++++|+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~Dwi~~~~l~~i~~~~~~~~Pf~R~~~~~~~~~i~yP~~~~tVp~~~l~vi~~liPii~ 107 (327)
T PLN02715 28 EIDLGVHTIKSHGGRVASKHKHDWIILVILIAIEIGLNLISPFYRYVGKDMMTDLKYPFKDNTVPIWSVPVYAVLLPIIL 107 (327)
T ss_pred hhhhcchhHhhcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCcccchhccCCCCCCcccHHHHHHHHHHHHHHH
Confidence 56999999999999999999999999999999999999999999988877667899999999999999999999999988
Q ss_pred HHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCC
Q 024622 82 FLIVYYHRRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSF 161 (265)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SF 161 (265)
++..++++++.++.++..++++++++++.++++++|+.+|||||+|+++|+|++...++...+.+|++++..++++++||
T Consensus 108 i~~~~~~r~~~~~~~~~~l~l~~al~~t~lit~~lK~~vGRpRPdfl~rC~Pd~~~~~~~l~~~iCt~~~~~l~dg~~SF 187 (327)
T PLN02715 108 FVCFYLKRRCVYDLHHSILGLLFAVLITGVITDSIKVATGRPRPNFYWRCFPDGKELYDALGGVICHGKAAEVKEGHKSF 187 (327)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCchhhcCccccccccccccccccCccccccccCCCC
Confidence 88888888888888888999999999999999999999999999999999999877666666789998888889999999
Q ss_pred CChhHHHHHHHHHHHHHHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHHHH
Q 024622 162 PSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQ 241 (265)
Q Consensus 162 PSGHas~a~~~~~~l~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~~ 241 (265)
|||||+.++++++++++|+..+++.++++++.+|.++.+++++++++||+||++|++||++||++|+++|.++++++|+.
T Consensus 188 PSGHSS~sfagl~~Lsl~L~~kl~~~~~~~~~~k~~l~~lpll~A~lIalSRv~Dy~Hh~sDVlaG~lLG~~~a~~~y~~ 267 (327)
T PLN02715 188 PSGHTSWSFAGLTFLSLYLSGKIKAFNGEGHVAKLCLVIFPLLAACLVGISRVDDYWHHWQDVFAGALIGILVAAFCYRQ 267 (327)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999887777788898889999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCcccc
Q 024622 242 FFPPPYHAEGTVQV 255 (265)
Q Consensus 242 ~~~~~~~~~~~~~~ 255 (265)
+|++++++++|.|+
T Consensus 268 ~fp~~~~~~~~~p~ 281 (327)
T PLN02715 268 FYPNPYHEEGWGPY 281 (327)
T ss_pred HcCCccccCCCCCc
Confidence 99999999999998
No 3
>PLN02731 Putative lipid phosphate phosphatase
Probab=100.00 E-value=5.6e-54 Score=377.23 Aligned_cols=254 Identities=75% Similarity=1.418 Sum_probs=237.5
Q ss_pred CcccCcccccccchhhhhhhhHHHHHHHHHHHHHHHHhhcCCccccccCCccccCCCCCCCCCcchhhHHHHHHHHHHHH
Q 024622 2 DVQFGSHTLRSHGVVVARKHMHDWLIFLFLVVMDIILNAIDPFYRFVGKDMMTDLKYPFKNNTVPVWAVPVYAVLVPVII 81 (265)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~d~i~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~p~~~~~i~~~~l~~~~~~~p~~~ 81 (265)
..|+|+|+.++|+.++.+.++.||+++++++++..++..++|++|++..+++++++||++++++|.+.+.++++++|+++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~Dwii~~~l~~~~~i~~~~~Pf~r~f~~~~~~~isyP~~~etVp~~~l~ii~~liPi~i 101 (333)
T PLN02731 22 EAQLGGHTLRSHGMTVARTHMHDWIILVLLVILECVLLIIHPFYRFVGKDMMTDLSYPLKSNTVPIWSVPVYAMLLPLVI 101 (333)
T ss_pred hcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCcccccccCCCCCCcccHHHHHHHHHHHHHHh
Confidence 57999999999999999999999999999999998999999999998887778899999999999999999999999988
Q ss_pred HHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCC
Q 024622 82 FLIVYYHRRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSF 161 (265)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SF 161 (265)
++++..++++.++.++..++++++++++.++++++|..+|||||+++++|+|++...++...+..|++++..++++++||
T Consensus 102 ii~~~~~~r~~~~l~~~ilgll~s~~~t~liT~ilK~~vGRpRPdfl~rC~P~~~~~~~~~~~~iCt~~~~~l~dg~~SF 181 (333)
T PLN02731 102 FIFIYFRRRDVYDLHHAVLGLLYSVLVTAVLTDAIKNAVGRPRPDFFWRCFPDGKALYDSLGDVICHGDKSVIREGHKSF 181 (333)
T ss_pred eeeeeeehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCchhhcCccccccccccccceecCchhcccccCCCC
Confidence 88777778888888888899999999999999999999999999999999999877666667789999888889999999
Q ss_pred CChhHHHHHHHHHHHHHHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHHHH
Q 024622 162 PSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQ 241 (265)
Q Consensus 162 PSGHas~a~~~~~~l~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~~ 241 (265)
|||||+.++++++++++|+..+++.+++++..+|.++.++++++++++|+||++|++||++||++|+++|.++++++|+.
T Consensus 182 PSGHSS~sfagl~fLslyL~~kl~~~~~~~~~~rl~l~~lpll~A~lIalSRV~Dy~Hh~sDVlaG~lLG~~iA~~~Y~~ 261 (333)
T PLN02731 182 PSGHTSWSFSGLGFLSLYLSGKIQAFDGKGHVAKLCIVILPLLFAALVGISRVDDYWHHWQDVFAGGLLGLAISTICYLQ 261 (333)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998877777778888888999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCcccc
Q 024622 242 FFPPPYHAEGTVQV 255 (265)
Q Consensus 242 ~~~~~~~~~~~~~~ 255 (265)
+|+++++++++.|+
T Consensus 262 yfp~~~~~~~~~p~ 275 (333)
T PLN02731 262 FFPPPYHTEGWGPY 275 (333)
T ss_pred HcCCccccCCCCCh
Confidence 99999999999998
No 4
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=100.00 E-value=4.1e-47 Score=332.23 Aligned_cols=247 Identities=40% Similarity=0.712 Sum_probs=218.2
Q ss_pred CcccccccchhhhhhhhHHHHHHHHHHHHHHHHhhcCCc-cc-cccCCccccCCCCCCCC-CcchhhHHHHHHHHHHHHH
Q 024622 6 GSHTLRSHGVVVARKHMHDWLIFLFLVVMDIILNAIDPF-YR-FVGKDMMTDLKYPFKNN-TVPVWAVPVYAVLVPVIIF 82 (265)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~d~i~~~~l~~~~~~~~~~~p~-~~-~~~~~~~~~~~~p~~~~-~i~~~~l~~~~~~~p~~~~ 82 (265)
+.+..+++..+..+....|+++++++.+....+....++ +| |+++| ++++||++++ +++.+++..+++.+|++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~d~~il~~l~~~~~~l~~~~~~~~rgF~c~D--~si~~Py~~~etI~~~~L~~i~~~~P~~vI 79 (317)
T KOG3030|consen 2 GNRMIKRSNSRRPCRVLVDLLILALLVLLFYVLELTDPFYRRGFFCDD--ESISYPYRENETIPPLLLLAIAVLLPLLVI 79 (317)
T ss_pred CCcccCCccchhhHHHHHHHHHHHHHHHHHHHHHhcccceeeeeecCC--hhhcCcCCCCCccCHHHHHHHHHHhhHHHH
Confidence 456788888889999999999999999988888766666 55 77777 8999999994 9999999999999999999
Q ss_pred HHHHHhhh----------------chHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcc-cC-----
Q 024622 83 LIVYYHRR----------------DVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAV-YD----- 140 (265)
Q Consensus 83 l~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~-~~----- 140 (265)
++....+. ..++..+....+++++++++++++++|..+||+||+|+++|+|++... ..
T Consensus 80 ~v~e~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lfgl~~t~~~t~~~K~~vGRlRP~Fl~vC~P~~~~~~~~~~~~~ 159 (317)
T KOG3030|consen 80 LVVEFIRACLKSKSTESNICCLNPDVRRLYRFVGVFLFGLAATQLFTDIIKLAVGRLRPHFLDVCQPDGTDGSTCSDSNL 159 (317)
T ss_pred HHHHHHHHHhhccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeccccCCccCCCCCccccc
Confidence 88766543 567888899999999999999999999999999999999999998752 21
Q ss_pred CcccccccC-CccccccCCCCCCChhHHHHHHHHHHHHHHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCC
Q 024622 141 QFNNVICHG-DKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWH 219 (265)
Q Consensus 141 ~~~~~~c~~-~~~~~~~~~~SFPSGHas~a~~~~~~l~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H 219 (265)
.++++.|++ +++.++|+++|||||||+.++++++|+++|+++++..+. +++.+|++++++++++|+++|+|||.|++|
T Consensus 160 yi~~~~Ctg~~~~~i~e~rkSFPSGHsS~s~y~~~flalyl~~~~~~~~-~~rllr~~l~f~~l~~A~~v~lSRV~DYkH 238 (317)
T KOG3030|consen 160 YIEDFICTGPDPDVVREGRKSFPSGHSSFSFYAMGFLALYLQARLFWFG-RGRLLRPLLQFLPLMLALLVGLSRVSDYKH 238 (317)
T ss_pred ccccceeCCCCHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHHHHHHHeeehhccccc
Confidence 237899999 899999999999999999999999999999999988644 588999999999999999999999999999
Q ss_pred ChhHhHHHHHHHHHHHHHHHHHhcCCCCCCCCcccc
Q 024622 220 HWQDVFAGGLLGLVVATFCYLQFFPPPYHAEGTVQV 255 (265)
Q Consensus 220 ~~sDVl~G~~iG~~~a~~~~~~~~~~~~~~~~~~~~ 255 (265)
|||||++|+++|.++|+++++..++.....+.+.|.
T Consensus 239 HwsDV~aG~liG~~~A~~~~~~v~~~f~~~~~~~~~ 274 (317)
T KOG3030|consen 239 HWSDVLAGALIGAFVAYFLYRYVFPNFKDPTSEKPP 274 (317)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhcchhhcccccCCC
Confidence 999999999999999999999998877765554443
No 5
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1. Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both diacylglycerol pyrophosphate phosphatase activity as well as phosphatidate (PA) phosphatase activity, they may have a more generic housekeeping role in lipid metabolism.
Probab=100.00 E-value=1.9e-36 Score=251.83 Aligned_cols=189 Identities=49% Similarity=0.950 Sum_probs=158.7
Q ss_pred ccCCCCCCCC-CcchhhHHHHHHHHHHHHHHHHHHh-hhchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCccccc
Q 024622 54 TDLKYPFKNN-TVPVWAVPVYAVLVPVIIFLIVYYH-RRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRC 131 (265)
Q Consensus 54 ~~~~~p~~~~-~i~~~~l~~~~~~~p~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c 131 (265)
++++||++++ ++|..++.++.+.+|+.++++.... +++.++.....+.++++++++.++++++|..+||+||+++..|
T Consensus 1 ~~~~~p~~~~~~i~~~~l~~~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~ 80 (193)
T cd03390 1 PSISYPFAESETVPTWLLVIISVGIPLLVIILISLFFRRSLWDLHTSLLGLLLSVSLNGVITNVLKNYAGRPRPDFLARC 80 (193)
T ss_pred CCcCCCCCCCcEEcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHh
Confidence 3689999985 9999999999999999888777665 6666777777788889999999999999999999999999999
Q ss_pred cCCCCcccCCc-cccccc-CCccccccCCCCCCChhHHHHHHHHHHHHHHHhhhcccccCCchhHHHHHHHHHHHHHHHH
Q 024622 132 FPDGIAVYDQF-NNVICH-GDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLV 209 (265)
Q Consensus 132 ~p~~~~~~~~~-~~~~c~-~~~~~~~~~~~SFPSGHas~a~~~~~~l~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv 209 (265)
+|+.....+.. ..+.|. .+.....++++|||||||+.+++.++++++++..+.+.++++++.+|..+.++++++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHas~a~~~~~~l~l~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~v 160 (193)
T cd03390 81 FPDGGTPSDTLVGIDICCTGDPGVLKEGRKSFPSGHSSFAFAGLGFLSLYLAGKLHIFDPRGSSWRLLLALLPLLLAILV 160 (193)
T ss_pred CCCCCcccccccCCCeecCCCHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHH
Confidence 98875432221 114454 4556667888999999999999999999999988876555556677887888889999999
Q ss_pred HHHHhhCCCCChhHhHHHHHHHHHHHHHHHHHh
Q 024622 210 GISRVDDYWHHWQDVFAGGLLGLVVATFCYLQF 242 (265)
Q Consensus 210 ~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~~~ 242 (265)
|+||+++|+||++||++|+++|.++++++|++|
T Consensus 161 ~~SRi~~g~H~~sDVlaG~~lG~~~a~~~~~~~ 193 (193)
T cd03390 161 AVSRTRDYRHHFSDVIAGSLIGLIIAYLSYRQY 193 (193)
T ss_pred HHHHHhccccCHHHHHHHHHHHHHHHHheeEeC
Confidence 999999999999999999999999999988754
No 6
>cd03384 PAP2_wunen PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the survival of PGCs and is essential in the migration process of these cells towards the somatic gonadal precursors.
Probab=99.97 E-value=8.4e-31 Score=209.12 Aligned_cols=138 Identities=40% Similarity=0.671 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCc------ccccccCCccccccCCCCCCChhHHHHHH
Q 024622 98 AILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQF------NNVICHGDKHVVNEGHKSFPSGHTSWSFA 171 (265)
Q Consensus 98 ~~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~------~~~~c~~~~~~~~~~~~SFPSGHas~a~~ 171 (265)
.+..+++++.++.++++++|..+|||||+++++|+|+........ .+..|+++++.++++++||||||++.+++
T Consensus 5 ~~~~~~~~~~~~~l~~~~lK~~igrpRP~fl~~c~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHs~~a~~ 84 (150)
T cd03384 5 FVGVFLFGLFATQLLTDLGKYVTGRLRPHFLDVCKPNYTDLTCSLDHQYIADCTCCTGDPDLIREARLSFPSGHASLSMY 84 (150)
T ss_pred eehHHHHHHHHHHHHHHHHHHHhCCCCCChHhhcCCCCCCcccccCccccccceeeCCCHHHHhcCccCCCcHhHHHHHH
Confidence 356678889999999999999999999999999999976432111 23345677888899999999999999999
Q ss_pred HHHHHHHHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHH
Q 024622 172 GLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATF 237 (265)
Q Consensus 172 ~~~~l~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~ 237 (265)
.++++.+++..+.+. ++.+.+|..+.++++++++++++||+++|+||++||++|+++|.+++++
T Consensus 85 ~~~~l~l~l~~~~~~--~~~~~~~~~~~~~~~~~a~~v~~sRv~~~~H~~sDviaG~~lG~~~~~~ 148 (150)
T cd03384 85 AAVFLALYLQARLKL--RGSRLLRPLLQFLLLALALYVGLSRISDYKHHWSDVLAGALLGSVIALF 148 (150)
T ss_pred HHHHHHHHHHHHhcc--ccchHHHHHHHHHHHHHHHHHhHhhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999887663 3455677888888999999999999999999999999999999999875
No 7
>cd03396 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which mainly contains bacterial proteins, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.92 E-value=6.4e-24 Score=177.09 Aligned_cols=135 Identities=24% Similarity=0.211 Sum_probs=98.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHH
Q 024622 92 VYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFA 171 (265)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~ 171 (265)
.++.+...+.++.+++.+.+++..+|..+||+||.....|+++....... .+.....++++||||||++.+++
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~lK~~~~r~RP~~~~~~gg~~~~~~~~-------~~~~~~~~~~~SFPSGHas~af~ 134 (197)
T cd03396 62 LRRRRRALLLLILVIGLGLLVVAILKSHWGRPRPWDLTEFGGDAPYTPLF-------SGPSNGCGKGCSFPSGHASAGFA 134 (197)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHhCCCCCCCccc-------ccCCCCCCCCCcCCchhHHHHHH
Confidence 33444456777888888999999999999999999877665433211000 01112346889999999999998
Q ss_pred HHHHHHHHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHHHH
Q 024622 172 GLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQ 241 (265)
Q Consensus 172 ~~~~l~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~~ 241 (265)
.+....++. ++ ++ .+|.....+.+.++.++|+||++.|+||+|||++|+++|++++.+.|+.
T Consensus 135 ~~~~~~~~~-~~------~~-~~~~~~~~~~~~~~~~vg~sRi~~G~Hf~SDvl~g~~ig~~~~~~~~~~ 196 (197)
T cd03396 135 LLALYFLFR-RR------RP-RLARLVLAAGLALGALMGLARMARGAHFLSDVLWSLLLVWLIALLLYRL 196 (197)
T ss_pred HHHHHHHHH-Hh------cc-hHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 765543322 21 11 1344445666788999999999999999999999999999999998874
No 8
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily. Dolichyldiphosphatase is a membrane-associated protein located in the endoplasmic reticulum and hydrolyzes dolichyl pyrophosphate, as well as dolichylmonophosphate at a low rate. The enzyme is necessary for maintaining proper levels of dolichol-linked oligosaccharides and protein N-glycosylation, and might play a role in re-utilization of the glycosyl carrier lipid for additional rounds of lipid intermediate biosynthesis after its release during protein N-glycosylation reactions.
Probab=99.90 E-value=3.9e-22 Score=160.69 Aligned_cols=116 Identities=23% Similarity=0.291 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHHH
Q 024622 99 ILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSL 178 (265)
Q Consensus 99 ~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~ 178 (265)
......+...+..++.++|..++||||+.... ..+.++||||||++.+++.+.++.+
T Consensus 44 ~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~-----------------------~~~~~~SFPSgHa~~~~~~~~~~~l 100 (159)
T cd03382 44 AIYLFIGLLANEALNYVLKRIIKEPRPCSGAY-----------------------FVRSGYGMPSSHSQFMGFFAVYLLL 100 (159)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCc-----------------------CCCCCCCCCchhHHHHHHHHHHHHH
Confidence 34556677778889999999999999983211 1256799999999998877777765
Q ss_pred HHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHH
Q 024622 179 YISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCY 239 (265)
Q Consensus 179 ~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~ 239 (265)
++..+.+. ..++.++.......+++++.++.||+|+|+||++||++|+++|..++.+++
T Consensus 101 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~SRvylg~H~~~DVl~G~~lG~~~~~~~~ 159 (159)
T cd03382 101 FIYLRLGR--LNSLVSRFLLSLGLLLLALLVSYSRVYLGYHTVSQVVVGAIVGILLGILWF 159 (159)
T ss_pred HHHHHccc--chhHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcC
Confidence 54433221 011235555666778889999999999999999999999999999987753
No 9
>cd03392 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.89 E-value=4.1e-22 Score=164.21 Aligned_cols=117 Identities=34% Similarity=0.469 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHHH
Q 024622 99 ILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSL 178 (265)
Q Consensus 99 ~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~ 178 (265)
...++.++..+.+++..+|..++||||+....+ .+.++||||||++.+++.++++..
T Consensus 64 ~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~-----------------------~~~~~sfPSgHa~~~~~~~~~l~~ 120 (182)
T cd03392 64 ALFLLLALLGGGALNTLLKLLVQRPRPPLHLLV-----------------------PEGGYSFPSGHAMGATVLYGFLAY 120 (182)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC-----------------------CCCCCCCCcHHHHHHHHHHHHHHH
Confidence 455566777888999999999999999843211 357799999999999999988877
Q ss_pred HHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHHHHhc
Q 024622 179 YISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQFF 243 (265)
Q Consensus 179 ~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~~~~ 243 (265)
++.++.+ .+..|.....+.+.++..+|+||+++|+||+|||++|+++|.+++.+.+..+.
T Consensus 121 ~~~~~~~-----~~~~~~~~~~~~~~~~~~v~~sRv~lg~H~~sDvl~G~~lG~~~~~~~~~~~~ 180 (182)
T cd03392 121 LLARRLP-----RRRVRILLLILAAILILLVGLSRLYLGVHYPSDVLAGWLLGLAWLALLILLYR 180 (182)
T ss_pred HHHHHcc-----hhhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 7666543 12345555566778899999999999999999999999999999998877654
No 10
>PRK10699 phosphatidylglycerophosphatase B; Provisional
Probab=99.89 E-value=4.7e-22 Score=168.70 Aligned_cols=147 Identities=21% Similarity=0.136 Sum_probs=93.7
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCcccc--ccCCCCc-ccCCc-------------cccccc-
Q 024622 86 YYHRRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWR--CFPDGIA-VYDQF-------------NNVICH- 148 (265)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~--c~p~~~~-~~~~~-------------~~~~c~- 148 (265)
+..|.+.+........+..+++++..+++++|..++||||+..+. |+..+.. .|... .+..+.
T Consensus 66 ~~~r~~~k~~l~l~~~l~~~i~~~~~~k~~iK~~~~epRP~v~~l~~~~~~~~~~FY~l~~~~r~~~v~~~~~~~~~~~~ 145 (244)
T PRK10699 66 WCLRFRLKAALVLFAILAAAILVGQGVKSWIKERVQEPRPFVVWLEKTHHIPVDEFYTLKRAERGELVKEQLAEQSNIPQ 145 (244)
T ss_pred HHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHhcCCCHHHHHccCHHHHHHHHHHHHhccccCCH
Confidence 333333333333344566778889999999999999999974322 2221111 01000 000111
Q ss_pred -CCccccccCCCCCCChhHHHHHHHHHHHHHHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHH
Q 024622 149 -GDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAG 227 (265)
Q Consensus 149 -~~~~~~~~~~~SFPSGHas~a~~~~~~l~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G 227 (265)
..++...++++|||||||+.+++.+.+...++..+. +.......++++..+++||+|.|+|||+||++|
T Consensus 146 w~~~hw~~~~gySFPSGHa~~a~~~~l~~~~ll~~~~----------~~~~~~~~~~wa~~v~~SRvyLGvH~psDVlaG 215 (244)
T PRK10699 146 WLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRR----------RYKTVALLMLWATGVMGSRLLLGMHWPRDLVVA 215 (244)
T ss_pred HHHhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHccCcCHHHHHHH
Confidence 013445678999999999998875554443332211 112224456789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 024622 228 GLLGLVVATFCYLQF 242 (265)
Q Consensus 228 ~~iG~~~a~~~~~~~ 242 (265)
.++|.+++.+.+..+
T Consensus 216 ~llG~~~~~l~~~l~ 230 (244)
T PRK10699 216 TLISWLLVTVATWLA 230 (244)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999988876654
No 11
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily. Lipid A 1-phosphatase, or LpxE from Francisella novicida selectively dephosphorylates lipid A at the 1-position. Lipid A is the membrane-anchor component of lipopolysaccharides (LPS), the major constituents of the outer membrane in many gram-negative bacteria.
Probab=99.89 E-value=4.6e-22 Score=164.34 Aligned_cols=116 Identities=34% Similarity=0.426 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHH
Q 024622 98 AILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLS 177 (265)
Q Consensus 98 ~~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~ 177 (265)
....+..++..+.+++..+|..++||||+....++.... +.....+.++||||||++.+++.++++.
T Consensus 70 ~~~~l~~~~~~~~~i~~~lK~~~~R~RP~~~~~~~~~~~-------------~~~~~~~~~~SFPSGHa~~a~~~~~~l~ 136 (186)
T cd03389 70 AGLFLFATVALSGILVNLLKFIIGRARPKLLFDDGLYGF-------------DPFHADYAFTSFPSGHSATAGAAAAALA 136 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCChhhcCCcccc-------------cccccCCCCCCcCcHHHHHHHHHHHHHH
Confidence 345556667778889999999999999985432211100 0112236779999999999999988887
Q ss_pred HHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHHHH
Q 024622 178 LYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQ 241 (265)
Q Consensus 178 ~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~~ 241 (265)
.+..+ ++ ...+.++.++|+||+++|+||+|||++|+++|.+++.+.|+.
T Consensus 137 ~~~~~-----------~~----~~~~~~~~lv~~SRiylg~H~~sDVl~G~~lG~~~~~~~~~~ 185 (186)
T cd03389 137 LLFPR-----------YR----WAFILLALLIAFSRVIVGAHYPSDVIAGSLLGAVTALALYQR 185 (186)
T ss_pred HHHHH-----------HH----HHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHh
Confidence 65422 11 223557789999999999999999999999999999998875
No 12
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to eukaryota, lacks functional characterization and may act as a membrane-associated phosphatidic acid phosphatase.
Probab=99.89 E-value=8.1e-22 Score=158.77 Aligned_cols=111 Identities=35% Similarity=0.422 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHH
Q 024622 97 HAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFL 176 (265)
Q Consensus 97 ~~~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l 176 (265)
+....++.+++++.+++.++|..++|+||.... ++. ........+||||||++.+++.++++
T Consensus 47 ~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~---~~~---------------~~~~~~~~~SFPSGHa~~a~a~a~~l 108 (159)
T cd03391 47 EVLVNLLLGLLLDIITVAILKALVRRRRPAYNS---PDM---------------LDYVAVDKYSFPSGHASRAAFVARFL 108 (159)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC---Ccc---------------chhccCCCCCCCchhHHHHHHHHHHH
Confidence 345666777788888899999999999997431 110 01112457899999999999998887
Q ss_pred HHHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHH
Q 024622 177 SLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATF 237 (265)
Q Consensus 177 ~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~ 237 (265)
..+...+ .......+.++.++|+||+++|+||++||++|+++|.+.+.+
T Consensus 109 ~~~~~~~------------~~~~~~~~~~a~~v~~SRvylg~H~psDVlaG~~lG~~~~~~ 157 (159)
T cd03391 109 LNHLVLA------------VPLRVLLVLWATVVGISRVLLGRHHVLDVLAGAFLGYLEALL 157 (159)
T ss_pred HHHHHHH------------HHHHHHHHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHHHHh
Confidence 7653221 112334567889999999999999999999999999998865
No 13
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily. Several members of this family have been annotated as bacitracin transport permeases, as it was suspected that they form the permease component of an ABC transporter system. It was shown, however, that BcrC from Bacillus subtilis posesses undecaprenyl pyrophosphate (UPP) phospatase activity, and it is hypothesized that it competes with bacitracin for UPP, increasing the cell's resistance to bacitracin.
Probab=99.88 E-value=1e-21 Score=155.86 Aligned_cols=109 Identities=25% Similarity=0.228 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHHH
Q 024622 99 ILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSL 178 (265)
Q Consensus 99 ~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~ 178 (265)
......++.++.+++..+|..++||||..... +. ....++.++||||||++.+++.+..+..
T Consensus 35 ~~~~~~~~~~~~~i~~~lk~~~~r~RP~~~~~---~~---------------~~~~~~~~~SFPSgH~~~~~~~~~~l~~ 96 (144)
T cd03385 35 VLFATIAVAVALLINYIIGLLYFHPRPFVVGL---GH---------------NLLPHAADSSFPSDHTTLFFSIAFSLLL 96 (144)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCcccc---cc---------------ccccCCCCCCCCcHHHHHHHHHHHHHHH
Confidence 45556677788889999999999999962210 00 0011356799999999999876654332
Q ss_pred HHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHH
Q 024622 179 YISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCY 239 (265)
Q Consensus 179 ~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~ 239 (265)
.. + + ........+++++|+||+|.|+||++||++|+++|.+++.+.|
T Consensus 97 --~~--------~---~-~~~~~~~~~a~~v~~SRvylg~H~~sDVl~G~~lg~~~~~~~~ 143 (144)
T cd03385 97 --RR--------R---K-WAGWILLILALLVAWSRIYLGVHYPLDMLGAALVAVLSALLVF 143 (144)
T ss_pred --Hh--------h---H-HHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHh
Confidence 11 1 1 1123456788999999999999999999999999999998775
No 14
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family. In some prokaryotes, PAP2_like phosphatase domains appear fused to E. coli DAGK-like trans-membrane diacylglycerol kinase domains. The cellular function of these architectures remains to be determined.
Probab=99.88 E-value=1.1e-21 Score=147.53 Aligned_cols=95 Identities=27% Similarity=0.421 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHHHHHhh
Q 024622 103 LYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISG 182 (265)
Q Consensus 103 ~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~~l~~ 182 (265)
+.+.+++.+++.++|..++|+||+ + .|||||||+.+++.+.++.+...
T Consensus 14 ~~~~~~~~~i~~~lK~~~~r~RP~-----------------------------~--~sFPSgHt~~a~a~a~~l~~~~~- 61 (109)
T cd03383 14 FVSLLIVIIVVVILKAYFGRGTPL-----------------------------E--GGMPSGHAAIAFSIATAISLITN- 61 (109)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCC-----------------------------C--CCCChHHHHHHHHHHHHHHHHHh-
Confidence 456667888999999999999997 1 48999999999988887764321
Q ss_pred hcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHHHH
Q 024622 183 KIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQ 241 (265)
Q Consensus 183 ~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~~ 241 (265)
+.......+.+++++|.||+|+|.||++||++|+++|..++.+.|+.
T Consensus 62 ------------~~~~~~~~~~~a~lv~~SRvylg~H~psDVlaG~~lG~~~~~~~~~~ 108 (109)
T cd03383 62 ------------NPIISILSVLLAVMVAHSRVEMKIHTMWEVVVGAILGALITLLIFKI 108 (109)
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 11223455678899999999999999999999999999999988764
No 15
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second messenger in the cell, and extracellularly by binding to G-protein coupled receptors of the endothelial differentiation gene family.
Probab=99.87 E-value=3.2e-21 Score=154.21 Aligned_cols=112 Identities=24% Similarity=0.247 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHHHHHh
Q 024622 102 LLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYIS 181 (265)
Q Consensus 102 ~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~~l~ 181 (265)
++.+...+..++..+|..++||||+.... ... .....+.++||||||++.+++.++++..++.
T Consensus 38 ~~~~~~~~~~~~~~lK~~~~r~RP~~~~~----~~~-------------~~~~~~~~~SFPSgH~~~a~~~~~~l~~~~~ 100 (151)
T cd03388 38 LVVVLALGMYIGQFIKDLFCLPRPSSPPV----VRL-------------TMSSAALEYGFPSTHAMNATAISFYLLIYLY 100 (151)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCch----hhh-------------hccccCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 44556667788899999999999983110 000 0000256899999999999999988887655
Q ss_pred hhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHH
Q 024622 182 GKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATF 237 (265)
Q Consensus 182 ~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~ 237 (265)
++.+. .+.........+++++++||+|.|+||++||++|+++|..++.+
T Consensus 101 ~~~~~-------~~~~~~~~~~~~~~~v~~SRvylgvH~p~DVl~G~~lG~~~~~~ 149 (151)
T cd03388 101 DRYQY-------PFVLGLILALFYSTLVCLSRIYMGMHSVLDVIAGSLIGVLILLF 149 (151)
T ss_pred Hhccc-------hHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 54321 23333345577889999999999999999999999999988754
No 16
>cd03395 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.87 E-value=4.4e-21 Score=157.42 Aligned_cols=111 Identities=31% Similarity=0.284 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHHHHHhhh
Q 024622 104 YSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGK 183 (265)
Q Consensus 104 ~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~~l~~~ 183 (265)
.....+.+++..+|..++||||.....-...+ ....++.++|||||||+.+++.+.++.....++
T Consensus 64 ~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~---------------~~~~~~~~~SFPSgHt~~a~~~~~~l~~~~~~~ 128 (177)
T cd03395 64 AVGFADQLASGFLKPLVARLRPCNALDGVRLV---------------VLGDQGGSYSFASSHAANSFALALFIWLFFRRG 128 (177)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCccccccc---------------cccCCCCCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 34455667888999999999998421100000 001135689999999999999888876543321
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHHHHh
Q 024622 184 IKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQF 242 (265)
Q Consensus 184 ~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~~~ 242 (265)
......+.++.++|+||+|.|+||++||++|+++|..++.+.+..+
T Consensus 129 -------------~~~~~~~~~~~~v~~SRvylG~H~psDVl~G~~lG~~~~~~~~~~~ 174 (177)
T cd03395 129 -------------LFSPVLLLWALLVGYSRVYVGVHYPGDVIAGALIGIISGLLFYLLF 174 (177)
T ss_pred -------------HHHHHHHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1123446678999999999999999999999999999998887655
No 17
>PRK09597 lipid A 1-phosphatase; Reviewed
Probab=99.87 E-value=3e-20 Score=150.87 Aligned_cols=159 Identities=21% Similarity=0.239 Sum_probs=99.1
Q ss_pred HHHhhcCCccccccCCccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHH
Q 024622 36 IILNAIDPFYRFVGKDMMTDLKYPFKNNTVPVWAVPVYAVLVPVIIFLIVYYHRRDVYDLHHAILGLLYSVLVTGVLTDA 115 (265)
Q Consensus 36 ~~~~~~~p~~~~~~~~~~~~~~~p~~~~~i~~~~l~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 115 (265)
.+.....|++..-. +...|.....+.. .+-.++.+.-....+.+++++ ....++.+++.+.+++..
T Consensus 30 ~~~~~~~~~~~~~~-----dp~~p~~~~~l~~-----~~r~it~lg~~~~~l~~~d~~----g~~~l~~al~~~~ll~~~ 95 (190)
T PRK09597 30 ILLGIFAPFPKVPK-----QPSVPLAFHFTEH-----YARFIPTILSVAIPLIQRDAI----GLFQVANASIATTLLTHT 95 (190)
T ss_pred HHHHhccCCCCCCC-----CccCCCCcHHHHH-----HHHHHHHHHHHHHHHHhccHh----HHHHHHHHHHHHHHHHHH
Confidence 34445567655322 2344444433333 222233333322334444433 367778889999999999
Q ss_pred HhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHHHHHhhhcccccCCchhHH
Q 024622 116 IKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAK 195 (265)
Q Consensus 116 lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~~l~~~~~~~~~~~~~~r 195 (265)
+|..+.|+||... .++ ...+.+++|||||||+.+++.+.++.. +.+ ++
T Consensus 96 LK~~~~R~~~~~~---r~~-----------------~~p~~~~~SFPSGHt~~af~~a~~l~~----~~~--------~~ 143 (190)
T PRK09597 96 TKRALNHVTINDQ---RLG-----------------ERPYGGNFNMPSGHSSMVGLAVAFLMR----RYS--------FK 143 (190)
T ss_pred HHHHhcccccccc---ccc-----------------cCCCCCCCCCCcHHHHHHHHHHHHHHH----HHc--------hh
Confidence 9999999887621 000 011234599999999999876644332 111 11
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHHHHh
Q 024622 196 LCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQF 242 (265)
Q Consensus 196 ~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~~~ 242 (265)
... ..+.+++++|.||||.|+||++||++|+++|.+++.+....+
T Consensus 144 ~~~--~~l~lallVg~SRVYLGvHyPsDVLaG~liGil~~~lf~~~~ 188 (190)
T PRK09597 144 KYW--WLLPLIPLTMLARIYLDMHTIGAVLAGLGVGMLCVSLFTSPK 188 (190)
T ss_pred HHH--HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 111 123456789999999999999999999999999998766543
No 18
>cd03394 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.87 E-value=1.2e-21 Score=147.55 Aligned_cols=101 Identities=39% Similarity=0.543 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHHH
Q 024622 99 ILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSL 178 (265)
Q Consensus 99 ~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~ 178 (265)
.+.++.++.++.+++..+|..++|+||+.. .+.++||||||++.+++.+.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~--------------------------~~~~~sfPSgHa~~a~~~~~~~~~ 58 (106)
T cd03394 5 LLILAEAAALTAAVTEGLKFAVGRARPDGS--------------------------NNGYRSFPSGHTASAFAAATFLQY 58 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--------------------------CCCCCccCcHHHHHHHHHHHHHHH
Confidence 566777888899999999999999999832 156799999999999988877654
Q ss_pred HHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHH
Q 024622 179 YISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFC 238 (265)
Q Consensus 179 ~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~ 238 (265)
.... + ......+.++.++++||++.|+||++||++|+++|.+++.++
T Consensus 59 ~~~~------------~-~~~~~~~~~~~~v~~sRv~~g~H~~sDV~~G~~lG~~~~~~~ 105 (106)
T cd03394 59 RYGW------------R-WYGIPAYALASLVGASRVVANRHWLSDVLAGAAIGILVGYLV 105 (106)
T ss_pred HHcc------------h-HHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHheeee
Confidence 2211 1 112334567789999999999999999999999999988654
No 19
>cd03393 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria and archaea, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.86 E-value=7.1e-21 Score=147.48 Aligned_cols=109 Identities=28% Similarity=0.294 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHHHH
Q 024622 100 LGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLY 179 (265)
Q Consensus 100 ~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~~ 179 (265)
.....+..++..++..+|..++||||+.....++ .....+.++||||||++.+++.+..+...
T Consensus 16 ~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~-----------------~~~~~~~~~sFPSgHa~~~~~~~~~~~~~ 78 (125)
T cd03393 16 RYLGLALCASGYLNAALKEVFKIPRPFTYDGIQA-----------------IYEESAGGYGFPSGHAQTSATFWGSLMLH 78 (125)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCcCCCcccch-----------------hccCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 3445577778889999999999999984321110 01123678999999999998776665443
Q ss_pred HhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHH
Q 024622 180 ISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFC 238 (265)
Q Consensus 180 l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~ 238 (265)
.. +.....+...++..+++||++.|+||++||++|+++|..++++.
T Consensus 79 ~~-------------~~~~~~~~~~~~~~v~~sRv~lg~H~~sDVl~G~~lG~~~~~~~ 124 (125)
T cd03393 79 VR-------------KKWFTLIGVVLVVLISFSRLYLGVHWPSDVIGGVLIGLLVLVLG 124 (125)
T ss_pred HH-------------HHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHh
Confidence 21 11222344567889999999999999999999999999998763
No 20
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional
Probab=99.85 E-value=6.5e-20 Score=153.00 Aligned_cols=110 Identities=17% Similarity=0.130 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHH
Q 024622 97 HAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFL 176 (265)
Q Consensus 97 ~~~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l 176 (265)
+.....+.+++++.+++..+|..++||||..... + .....++.++||||||++.+++.+..+
T Consensus 59 ~~~~~~~~~~~~~~~~~~~lk~~~~r~RP~~~~~----~--------------~~~~~~~~~~SFPSgHa~~~~~~a~~~ 120 (202)
T PRK11837 59 QLVIKIAIALAISLLVSWTIGHLFPHDRPFVEGI----G--------------YNFLHHAADDSFPSDHGTVIFTFALAF 120 (202)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcc----c--------------cccccCCCCCCCchHHHHHHHHHHHHH
Confidence 3455566777888888999999999999962110 0 011123567899999999888765433
Q ss_pred HHHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHH
Q 024622 177 SLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFC 238 (265)
Q Consensus 177 ~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~ 238 (265)
... .+ + ......+.+++++|+||||.|+||||||++|+++|.+++.+.
T Consensus 121 l~~--~~-----------~-~~~~~~~~~a~lva~SRVylGvHypsDVlgG~~lG~~~~~~~ 168 (202)
T PRK11837 121 LFW--HR-----------L-WSGSLLMAIAVAIAWSRVYLGVHWPLDMLGALLVGMIGCLSA 168 (202)
T ss_pred HHH--HH-----------H-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHH
Confidence 221 11 0 122344667899999999999999999999999999998865
No 21
>smart00014 acidPPc Acid phosphatase homologues.
Probab=99.84 E-value=2.9e-20 Score=142.11 Aligned_cols=111 Identities=40% Similarity=0.538 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccc-cCCccccccCCCCCCChhHHHHHHHHHHHHHHHhhh
Q 024622 105 SVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVIC-HGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGK 183 (265)
Q Consensus 105 ~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c-~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~~l~~~ 183 (265)
+.+.+.+++.++|..++|+||+.... ...| ..+.....+.+.||||||++.+++.+.++..++.++
T Consensus 3 ~~~~~~~~~~~lK~~~~r~RP~~~~~-------------~~~~~~~~~~~~~~~~~sfPSgHa~~~~~~~~~l~~~~~~~ 69 (116)
T smart00014 3 LAVVSLLFTGVIKNYFGRPRPFFLDI-------------GDACCTPNFLLTLEAGYSFPSGHTAFAFAFALFLLLYLPAR 69 (116)
T ss_pred HHHHHHHHHHHHHHHhCCCCcCcccc-------------cccccCcchhhhcCCCCCcChHHHHHHHHHHHHHHHHHHHH
Confidence 35667889999999999999996531 1112 122344568899999999999999999998877665
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHH
Q 024622 184 IKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATF 237 (265)
Q Consensus 184 ~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~ 237 (265)
.+ +.......+.++..++.||+++|+||++||++|+.+|..++.+
T Consensus 70 ~~---------~~~~~~~~~~~~~~~~~sRi~~g~H~~~Dv~~G~~lG~~v~~~ 114 (116)
T smart00014 70 AA---------RKLLIILLLLLALVVGFSRVYLGAHWPSDVLAGSLLGILIAAV 114 (116)
T ss_pred hh---------hHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 43 2233455678899999999999999999999999999998854
No 22
>PLN02525 phosphatidic acid phosphatase family protein
Probab=99.82 E-value=3.1e-19 Score=159.57 Aligned_cols=122 Identities=23% Similarity=0.241 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHHHHHh
Q 024622 102 LLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYIS 181 (265)
Q Consensus 102 ~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~~l~ 181 (265)
+...++.+..+++.+|..+.||||.....-. .... ..+.....++|||||||+.+++.++++..++.
T Consensus 40 lv~ll~~~~~l~~~lKd~v~rPRP~~pp~~r---------i~~~----~~~~~~a~eYsFPSgHt~nA~av~~~ll~~l~ 106 (352)
T PLN02525 40 MTLLMAFCDYVGNCIKDVVSAPRPSCPPVRR---------VTAT----KDEEENAMEYGLPSSHTLNTVCLSGYLLHYVL 106 (352)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCcCCcchhh---------hhcc----cccccCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 3444566667888999999999997311000 0000 00112356799999999999999998887765
Q ss_pred hhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHH
Q 024622 182 GKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCY 239 (265)
Q Consensus 182 ~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~ 239 (265)
++.+ ......+.....+...+++++++||+|.|+|+++||++|+++|.+++.+.+
T Consensus 107 ~~~~---~~~~~~~~~~~~l~~l~allV~~SRlYLGvH~psDVl~G~~lG~~i~~~~~ 161 (352)
T PLN02525 107 SYLQ---NVDASVIFAGLALFCLLVALVGFGRLYLGMHSPIDIIAGLAIGLVILAFWL 161 (352)
T ss_pred Hhcc---ccchhHHHHHHHHHHHHHHHHHHHHHheeccCHHHHHHHHHHHHHHHHHHH
Confidence 5432 111122333334456788999999999999999999999999999887743
No 23
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily. Glucose-6-phosphatase converts glucose-6-phosphate into free glucose and is active in the lumen of the endoplasmic reticulum, where it is bound to the membrane. The generation of free glucose is an important control point in metabolism, and stands at the end of gluconeogenesis and the release of glucose from glycogen. Deficiency of glucose-6-phosphatase leads to von Gierke's disease.
Probab=99.82 E-value=5.4e-19 Score=149.83 Aligned_cols=134 Identities=20% Similarity=0.147 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHHHHHh
Q 024622 102 LLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYIS 181 (265)
Q Consensus 102 ~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~~l~ 181 (265)
++....++..++.++|.+++|+||..... +.+. ++.... ......+...+.++||||||++.+++.+..+...+.
T Consensus 20 l~~~~~~~~~ln~vlK~ii~r~RP~~~~~-~~~~---~~~~~~-p~~~~~~l~c~tgysfPSGHam~a~a~~~~l~~~l~ 94 (235)
T cd03381 20 LLWVAVIGDWLNLVFKWILFGQRPYWWVH-ETDY---YSNSSV-PKIEQFPLTCETGPGSPSGHAMGTTAVLLVMVTALL 94 (235)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCchhc-cccc---cccccc-ccccccccccCCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 44445555568999999999999974211 1100 000000 000001122378899999999999988877765554
Q ss_pred hhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHHHH
Q 024622 182 GKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQ 241 (265)
Q Consensus 182 ~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~~ 241 (265)
...+. +...+..|..+......+.++||+||+|.|+|||+||++|.++|..++....+.
T Consensus 95 ~~~~~-r~~~~~~~~~~~~~~~~~~~~V~~SRvYLgvHfpsDVlaG~~lGi~~~~~~~~~ 153 (235)
T cd03381 95 SHLAG-RKRSRFLRVMLWLVFWGVQLAVCLSRIYLAAHFPHQVIAGVISGIAVAETFSHI 153 (235)
T ss_pred HHhhc-cchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 43321 011233455556666777888999999999999999999999999999876654
No 24
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3.1.3.4 from EC) enzymes, such as phosphatidylglycerophosphatase B 3.1.3.27 from EC from Escherichia coli. PAP2 enzymes have a core structure consisting of a 5-helical bundle, where the beginning of the third helix binds the cofactor []. PAP2 enzymes catalyse the dephosphorylation of phosphatidate, yielding diacylglycerol and inorganic phosphate []. In eukaryotic cells, PAP activity has a central role in the synthesis of phospholipids and triacylglycerol through its product diacylglycerol, and it also generates and/or degrades lipid-signalling molecules that are related to phosphatidate. Other related enzymes have a similar core structure, including haloperoxidases such as bromoperoxidase (contains one core bundle, but forms a dimer), chloroperoxidases (contains two core bundles arranged as in other family dimers), bacitracin transport permease from Bacillus licheniformis, glucose-6-phosphatase from rat. The vanadium-dependent haloperoxidases exclusively catalyse the oxidation of halides, and act as histidine phosphatases, using histidine for the nucleophilic attack in the first step of the reaction []. Amino acid residues involved in binding phosphate/vanadate are conserved between the two families, supporting a proposal that vanadium passes through a tetrahedral intermediate during the reaction mechanism.; GO: 0003824 catalytic activity, 0016020 membrane; PDB: 1QI9_B 1IW8_A 1EOI_A 1D2T_A 1QHB_D 1UP8_C 2IPB_A 1VNS_A 1VNF_A 1VNE_A ....
Probab=99.79 E-value=2.9e-20 Score=144.11 Aligned_cols=125 Identities=31% Similarity=0.493 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHHH
Q 024622 99 ILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSL 178 (265)
Q Consensus 99 ~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~ 178 (265)
++.++++++.+..++.++|..++|+||+....+.+..... ....+.+.||||||++.+++.+.++..
T Consensus 2 ~~~~~~~~~~~~~~~~~lk~~~~~~rP~~~~~~~~~~~~~-------------~~~~~~~~sfPSgH~~~~~~~~~~l~~ 68 (129)
T PF01569_consen 2 LLALLFALILAAILNNVLKWIFGRPRPFFYIPNYGLYPQH-------------WPFQSPFNSFPSGHAAIAAAFAFFLAY 68 (129)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHTB--HHHHHHHHHCHHTC-------------HHCHTTS-SSS-HHHHHHHHHHHHHHH
T ss_pred ccccccchhhhHHHHHHHHHhhCCCCcCcccccCcccccC-------------ccccCCCCcCcchhhhhHHHHHhhhhh
Confidence 3556777888888899999999999999775543322110 000112689999999999999998887
Q ss_pred HHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHHHHhcC
Q 024622 179 YISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQFFP 244 (265)
Q Consensus 179 ~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~~~~~ 244 (265)
+...+.+. +.......+.++.+++++|++.|.||++|+++|.++|..++.+.++.+++
T Consensus 69 ~~~~~~~~--------~~~~~~~~~~~~~~v~~srv~~g~H~~~Dvi~G~~lg~~~~~~~~~~~~~ 126 (129)
T PF01569_consen 69 YLGSRGWI--------RILLFLLAIVLAFLVALSRVYLGAHFFSDVIAGILLGILIAYLFYRVYKK 126 (129)
T ss_dssp HCCCCHHH--------SEEHHHHHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHHHHHCCHCHH
T ss_pred hhhccccc--------cchhhHHHHHHHHHhhcCEEEcCeEehHHHHHHHHHHHHHHHHHHHHhcc
Confidence 65443220 02234566788899999999999999999999999999999998776654
No 25
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies. Several members of this superfamily have been predicted to be transmembrane proteins.
Probab=99.75 E-value=4.3e-17 Score=124.41 Aligned_cols=113 Identities=46% Similarity=0.699 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHHHHHhh
Q 024622 103 LYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISG 182 (265)
Q Consensus 103 ~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~~l~~ 182 (265)
......+..++..+|..++|+||.....+.... ......+.++||||||++.+++.+.++..+...
T Consensus 9 ~~~~~~~~~~~~~~k~~~~~~rP~~~~~~~~~~--------------~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~ 74 (122)
T cd01610 9 LLALLAGLLLTGVLKYLFGRPRPYFLLRCGPDG--------------DPLLLTEGGYSFPSGHAAFAFALALFLALLLPR 74 (122)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCChHHhcCCcc--------------chhhhcCCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 334444555789999999999999665433221 112334778999999999999999888876544
Q ss_pred hcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHH
Q 024622 183 KIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFC 238 (265)
Q Consensus 183 ~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~ 238 (265)
+. .+.........++..++.||++.|.||++|+++|.++|..++...
T Consensus 75 ~~---------~~~~~~~~~~~~~~~~~~sri~~g~H~~~Dv~~G~~lg~~~~~~~ 121 (122)
T cd01610 75 RL---------LRLLLGLLLLLLALLVGLSRVYLGVHYPSDVLAGALLGILVALLV 121 (122)
T ss_pred HH---------HHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 21 223445667888999999999999999999999999999998653
No 26
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism]
Probab=99.69 E-value=8.4e-16 Score=128.76 Aligned_cols=120 Identities=33% Similarity=0.418 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHHHHhh--hhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHH
Q 024622 99 ILGLLYSVLVTGVLTDAIKI--AVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFL 176 (265)
Q Consensus 99 ~~~~~~~~~~~~~i~~~lK~--~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l 176 (265)
.................+|. .+.+|||..... ....+.++||||||++.+++.+.++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~sfPSgHt~~~~~~~~~l 151 (232)
T COG0671 93 ALKLLVGLPRPLIVLSALKTWHIFARPRPGLLVA---------------------LVLGASGYSFPSGHAAGAAAAALLL 151 (232)
T ss_pred HHHHHHHhHHHHHHHHHHhccccccCCCCcchhc---------------------cccCcccCCCCChhHHHHHHHHHHH
Confidence 34445555666777778887 889999974311 1223678999999999999988888
Q ss_pred HHHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHHHHhcCC
Q 024622 177 SLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQFFPP 245 (265)
Q Consensus 177 ~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~~~~~~ 245 (265)
..+...+... . .+.......+.++.++|+||++.|+||++||++|.++|..++.+.+..+.+.
T Consensus 152 ~~~~~~~~~~-----~-~~~~~~~~~~~~~~lv~~SRv~lGvH~~~DVi~G~~~g~~~~~~~~~~~~~~ 214 (232)
T COG0671 152 ALLLPLRRAL-----L-RRVLLLILLLLLAALVGLSRVYLGVHYPSDVIGGALLGALAALLLLLLLRPL 214 (232)
T ss_pred HHHHHHHHhh-----h-hHHHHHHHHHHHHHHHHHHHHhcccccchHHHhhHHHHHHHHHHHHHHHhcc
Confidence 8776654321 1 3455566778889999999999999999999999999999999988887654
No 27
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases.
Probab=99.68 E-value=6.1e-16 Score=130.19 Aligned_cols=112 Identities=29% Similarity=0.240 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHHH
Q 024622 99 ILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSL 178 (265)
Q Consensus 99 ~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~ 178 (265)
...+..++.-+.+++..+|..++|+||......... ..|. .........||||||++.+++.+.++..
T Consensus 95 ~~~l~~a~~da~~~~~~~K~~~~r~RP~~~~~~~~~----------~~~~--~~~~~~~~~SfPSGHa~~a~a~a~~l~~ 162 (209)
T cd03380 95 YALLARALTDAGIATWDAKYHYNRPRPFVAIRLQWL----------PICT--PEEGTPKHPSYPSGHATFGGAAALVLAE 162 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCchhhhccCCC----------cccC--CCCCCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 344445555566778999999999999854321000 0110 0112367899999999999999999887
Q ss_pred HHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHH
Q 024622 179 YISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATF 237 (265)
Q Consensus 179 ~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~ 237 (265)
++..+.. ....++..+|.|||+.|.||++||++|..+|..++-.
T Consensus 163 ~~~~~~~---------------~~~~~a~~~~~SRv~~G~H~~sDv~aG~~lG~~i~~~ 206 (209)
T cd03380 163 LFPERAA---------------ELLARAAEAGNSRVVAGVHWPSDVEAGRILGEAIAAA 206 (209)
T ss_pred HHHHHHH---------------HHHHHHHHHHHHhhhCCeecHHHHHHHHHHHHHHHHH
Confidence 7655321 1245678899999999999999999999999988754
No 28
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases. These enzymes catalyze phosphomonoester hydrolysis, with optimal activity in low pH conditions. They are secreted into the periplasmic space, and their physiological role remains to be determined.
Probab=99.68 E-value=6.7e-16 Score=131.68 Aligned_cols=100 Identities=25% Similarity=0.243 Sum_probs=73.2
Q ss_pred HHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHHHHHhhhcccccCC
Q 024622 111 VLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRR 190 (265)
Q Consensus 111 ~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~~l~~~~~~~~~~ 190 (265)
..+..+|..++|+||+... .+..|..........+.||||||++.+++.+..+..++..+..
T Consensus 115 ~~~~~~K~~~~r~RP~~~~-------------~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~a~~La~~~p~~~~----- 176 (232)
T cd03397 115 SATYPAKKYYNRPRPFVLN-------------DEPICTPPDESGLAKDGSYPSGHTAAGYAWALILAELVPERAD----- 176 (232)
T ss_pred HHHHHHHhhhCCCCCCccC-------------CCCcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 3478999999999998432 1112321111223568999999999999888888776654321
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHH
Q 024622 191 GHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFC 238 (265)
Q Consensus 191 ~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~ 238 (265)
..+..+..+|.|||+.|+||++||++|.++|..+....
T Consensus 177 ----------~l~~~a~~~g~SRv~~GvH~psDV~aG~~lG~~~~a~l 214 (232)
T cd03397 177 ----------EILARGSEYGQSRIVCGVHWPSDVMGGRIMAAALVAAL 214 (232)
T ss_pred ----------HHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHH
Confidence 12455778999999999999999999999999876544
No 29
>KOG4268 consensus Uncharacterized conserved protein containing PAP2 domain [Function unknown]
Probab=99.62 E-value=5.3e-15 Score=114.53 Aligned_cols=120 Identities=29% Similarity=0.317 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHH
Q 024622 97 HAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFL 176 (265)
Q Consensus 97 ~~~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l 176 (265)
.....+..++..-.+.+.+.|.++.|.||..-. |+. .......-+||||||++-++....+.
T Consensus 64 ~~Lv~llLgLlfDli~vaivk~~f~R~rP~~t~---pS~---------------l~~~t~DiYsFPsGHaSRaamv~~~~ 125 (189)
T KOG4268|consen 64 EVLVNLLLGLLFDLITVAIVKKLFKRRRPYETS---PSL---------------LDYLTMDIYSFPSGHASRAAMVSKFF 125 (189)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCC---HHH---------------HHHHhhhhhcCCCcchHHHHHHHHHH
Confidence 345667788888888899999999999998310 000 01112345999999999987665443
Q ss_pred HHHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHHHHhcCC
Q 024622 177 SLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQFFPP 245 (265)
Q Consensus 177 ~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~~~~~~ 245 (265)
..-... .-+.-.+..+.|+..+|+||+..|+||.+||++|+++|.+=+-++-+..++.
T Consensus 126 l~~a~~-----------a~Plyv~l~~~walvvglSRv~lGRHyvtDVlaG~fiGylearl~l~~~~~~ 183 (189)
T KOG4268|consen 126 LSHAVL-----------AVPLYVLLLVLWALVVGLSRVMLGRHYVTDVLAGFFIGYLEARLVLLVWMPS 183 (189)
T ss_pred HHHHHh-----------ccchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 321111 1122234467899999999999999999999999999999998887766543
No 30
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism]
Probab=99.54 E-value=4.2e-13 Score=109.06 Aligned_cols=154 Identities=20% Similarity=0.219 Sum_probs=108.6
Q ss_pred HHHHHHHHH---HHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCcc
Q 024622 76 LVPVIIFLI---VYYHRRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKH 152 (265)
Q Consensus 76 ~~p~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~ 152 (265)
+.|.++.+. ..+.+|+.. .+....+.+.+..++.++|+.+..|||... | .
T Consensus 36 L~p~~V~~~f~S~~l~rrEl~-----a~~~~~G~v~Ne~in~viK~il~qpRP~~~----~------------------~ 88 (228)
T KOG3146|consen 36 LSPVFVSAGFLSVFLFRRELA-----AIWFVIGQVSNEFINVVIKNILKQPRPVSF----P------------------D 88 (228)
T ss_pred HhHHHHHHHHHHHHhhhhhHH-----HHHHHHHHHHHHHHHHHHHHHhcCCCCCCC----C------------------c
Confidence 455544433 344566654 677788899999999999999999999621 1 1
Q ss_pred ccccCCCCCCChhHHHHHHHHHHHHHHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHH
Q 024622 153 VVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGL 232 (265)
Q Consensus 153 ~~~~~~~SFPSGHas~a~~~~~~l~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~ 232 (265)
..-..+++.||.|+.......+|..+.....++. ........+...+.+.++.+++.||++++.|+.++|+.|+++|.
T Consensus 89 ~t~~s~yGMPSSHSQfM~Ffs~y~~l~~y~~~~~--~~~s~~~~i~s~~~laLs~~v~~sRVyl~yHt~sQVv~G~ivG~ 166 (228)
T KOG3146|consen 89 TTLRSGYGMPSSHSQFMGFFSVYSSLSVYKWLGT--NNFSRFLFIKSGLLLALSFYVCYSRVYLKYHTLSQVVVGAIVGG 166 (228)
T ss_pred cccccCCCCCchHHHHHHHHHHHHHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhhh
Confidence 1124679999999999998888888776665542 11122222344566778999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCcccccccccc
Q 024622 233 VVATFCYLQFFPPPYHAEGTVQVFEMIPL 261 (265)
Q Consensus 233 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (265)
+++.+.|.....- .-+..|+.+.+|+
T Consensus 167 l~g~~Wf~~v~sl---ll~~f~~~l~~~i 192 (228)
T KOG3146|consen 167 LVGILWFYLVNSL---LLGLFPWILSLPI 192 (228)
T ss_pred hHHHHHHHHHHHH---HHHHHHHHHHhhH
Confidence 9998877655221 2233455555554
No 31
>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily. Haloperoxidases catalyze the oxidation of halides such as bromide or chloride by hydrogen peroxide, which results in subsequent halogenation of organic substrates, or halide-assisted disproportionation of hydrogen peroxide forming dioxygen. They are likely to participate in the biosynthesis of halogenated natural products, such as volatile halogenated hydrocarbons, chiral halogenated terpenes, acetogenins and indoles.
Probab=99.49 E-value=3.9e-13 Score=114.86 Aligned_cols=136 Identities=21% Similarity=0.129 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCCCCCCcccccc-CCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHH
Q 024622 97 HAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCF-PDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGF 175 (265)
Q Consensus 97 ~~~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~~c~-p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~ 175 (265)
+....+..++.-+.+++...|..+.|+||....... .++.. +...+..++ .........||||||++.+++.+..
T Consensus 86 ~~~a~l~~a~~da~ia~~~~K~~~~r~RP~~~~~~~~~~~~~--~~~~~~~w~--p~~~~p~~psyPSGHa~~a~a~a~v 161 (232)
T cd03398 86 RLFAAVNAAMTDAGIAAWDAKYHYRRWRPVTAIRLADTDGNP--ATEADPYWL--PLAGTPPHPSYPSGHATFAGAAATV 161 (232)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccCHHHHHHhhcccCCC--CCCCCCccc--ccCCCCCCCCCccHHHHHHHHHHHH
Confidence 334444555565667788999999999997532211 01100 001111111 1112356799999999999999999
Q ss_pred HHHHHhhhcccccCC--------chhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHH
Q 024622 176 LSLYISGKIKAFDRR--------GHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFC 238 (265)
Q Consensus 176 l~~~l~~~~~~~~~~--------~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~ 238 (265)
+..++......+... ....|.. .....++..+|.||||.|.||++||++|..+|..++-.+
T Consensus 162 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~~SRvy~GvH~~sDv~~G~~lG~~va~~v 230 (232)
T cd03398 162 LKALFGSDKVPDTVSEPDEGGPSTGVTRVW--AELNELADEVAISRVYAGVHFRSDDAAGAALGEQIGAAA 230 (232)
T ss_pred HHHHhCCCCCCCCccccccCCCCCCCcccH--hHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHHHH
Confidence 987776532210000 0001111 123456788999999999999999999999999988654
No 32
>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.
Probab=99.45 E-value=4.7e-12 Score=104.68 Aligned_cols=74 Identities=23% Similarity=0.265 Sum_probs=56.6
Q ss_pred ccccCCCCCCChhHHHHHHHHHHHHHHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHH
Q 024622 153 VVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGL 232 (265)
Q Consensus 153 ~~~~~~~SFPSGHas~a~~~~~~l~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~ 232 (265)
..+....||||||++.++..+.++.... +.....+...+++++++||++.+.||++||++|.++|.
T Consensus 111 ~~~~~~~~fPS~H~~~a~~~~~~~~~~~--------------~~~~~~~~~~~~~~i~~s~v~~~~H~~~Dv~~G~~l~~ 176 (186)
T cd03386 111 GFDNPFNAFPSLHVAWAVLAALFLWRHR--------------RRLLRWLAVLWPLLIWLSTLYLGNHYFIDLVGGIALAL 176 (186)
T ss_pred CCCCCcceeCcHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHCCccHHHHHHHHHHHH
Confidence 3446789999999999987776654321 11123455667889999999999999999999999999
Q ss_pred HHHHHHHH
Q 024622 233 VVATFCYL 240 (265)
Q Consensus 233 ~~a~~~~~ 240 (265)
+...+..+
T Consensus 177 ~~~~~~~~ 184 (186)
T cd03386 177 LSFYLARR 184 (186)
T ss_pred HHHHHhhc
Confidence 88776543
No 33
>COG3907 PAP2 (acid phosphatase) superfamily protein [General function prediction only]
Probab=99.42 E-value=1.1e-11 Score=100.10 Aligned_cols=179 Identities=16% Similarity=0.120 Sum_probs=119.7
Q ss_pred ccCCCCCCCCCcchhhHH----HHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCccc
Q 024622 54 TDLKYPFKNNTVPVWAVP----VYAVLVPVIIFLIVYYHRRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFW 129 (265)
Q Consensus 54 ~~~~~p~~~~~i~~~~l~----~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lK~~~grpRP~~~~ 129 (265)
+.-+++.+++.+.....- -..+...+..++..-.++|..+...+....+..++.++..+...+|...+...|..+.
T Consensus 60 ~G~~f~~~h~w~le~l~Hr~~K~l~Ia~~~~~Ll~~gv~~R~gra~~r~~ayvf~~~~L~~s~i~~lKalta~~CPWdLv 139 (249)
T COG3907 60 EGGQFLLKHHWILEYLIHRVGKWLSIAAGLCLLLGMGVRCRGGRAGCRASAYVFVTLVLSTSLISLLKALTAMDCPWDLV 139 (249)
T ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeecCcccccchhhHHHHHHHHHHHHHHHHHHhhhcCCCHHHH
Confidence 356777776655553331 1111122222222245666666666666777788899999999999999999999776
Q ss_pred cccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHHHHHhhhcccccCCchhHHHHHHHHHHHHHHHH
Q 024622 130 RCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLV 209 (265)
Q Consensus 130 ~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv 209 (265)
+.+.... +... ..+.+..+..+++||-||++..++.+.... ..+ ++++++++..+ ...+..+.++
T Consensus 140 ~yGG~~~--~~~L-----~~~rpp~~~pGhCfPgGHASsGfa~~aLfF---a~~----~~~Prla~l~l-~~g~~~G~l~ 204 (249)
T COG3907 140 RYGGGFP--FIGL-----FESRPPLKAPGHCFPGGHASSGFAWVALFF---AAW----GVCPRLAWLGL-MIGLVAGLLF 204 (249)
T ss_pred HhCCCCc--ceEe-----ecCCCCCCCCCCcCCCCCccccHHHHHHHH---HHc----ccChHHHHHHH-HHHHHHHHHH
Confidence 5433221 1111 012334456789999999999986554333 222 23455555444 4457888999
Q ss_pred HHHHhhCCCCChhHhHHHHHHHHHHHHHHHHHhcCCCC
Q 024622 210 GISRVDDYWHHWQDVFAGGLLGLVVATFCYLQFFPPPY 247 (265)
Q Consensus 210 ~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~~~~~~~~ 247 (265)
|+||+..|.||.|.-+....+.++++.-.|+.++-+..
T Consensus 205 g~sq~lrGAHFLsHnLWs~~~~WLv~Lg~f~l~~~~~~ 242 (249)
T COG3907 205 GISQQLRGAHFLSHNLWSLTICWLVALGFFYLFFVSPT 242 (249)
T ss_pred hHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999988876543
No 34
>KOG2822 consensus Sphingoid base-phosphate phosphatase [Lipid transport and metabolism]
Probab=99.11 E-value=6.1e-10 Score=98.23 Aligned_cols=130 Identities=22% Similarity=0.203 Sum_probs=85.8
Q ss_pred HHHHHHHHHHhhhhCCCCCCccccccCCCCcccCCcccccccCCccccccCCCCCCChhHHHHHHHHHHHHHHHhhhccc
Q 024622 107 LVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKA 186 (265)
Q Consensus 107 ~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~~~l~~~~~~ 186 (265)
+.+.-+.+.+|.++--|||.-- |-.. ++ ...-...++++||.||+.|++...+..+.+ ....
T Consensus 121 ~~~~Ylggc~KD~~~lPRP~sP----Pvvr-----lt-------ls~~~~~EYG~PStHt~natais~~~~~~l-s~~d- 182 (407)
T KOG2822|consen 121 VLVMYLGGCIKDYWCLPRPSSP----PVVR-----LT-------LSEDTTKEYGMPSTHTMNATAISFYFFLVL-STMD- 182 (407)
T ss_pred HHHHHHhhhhhheeecCCCCCC----CeEE-----EE-------eccchhhhhCCCcchhhhhhHHHHHHHHHH-HHhc-
Confidence 3345567789999999999721 1100 00 001125679999999999999888863332 2222
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHHH--HhcCCCCCCCCccccc
Q 024622 187 FDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYL--QFFPPPYHAEGTVQVF 256 (265)
Q Consensus 187 ~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~--~~~~~~~~~~~~~~~~ 256 (265)
+...........+.+.+..+++++|||.|+|-.-|+++|.++|+++..+.|. ..+++..+.+.|-|.+
T Consensus 183 --~~s~p~~~lgl~lv~~y~~lv~lgRiY~GMHgvlDi~sG~ligvl~~~~~~~~~~~~dnf~~s~~~fP~~ 252 (407)
T KOG2822|consen 183 --RESYPIQYLGLSLVLLYYALVCLGRIYCGMHGVLDIVSGLLIGVLILILRYPFVDFIDNFISSSQWFPLF 252 (407)
T ss_pred --hhhhHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHhhhHHHHHHhhhhhhHHHhccchhhcCccccHH
Confidence 1111223344445567788999999999999999999999999999877543 3345555555555553
No 35
>PF14378 PAP2_3: PAP2 superfamily
Probab=98.56 E-value=2.8e-06 Score=70.37 Aligned_cols=68 Identities=32% Similarity=0.353 Sum_probs=48.8
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHH
Q 024622 155 NEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVV 234 (265)
Q Consensus 155 ~~~~~SFPSGHas~a~~~~~~l~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~ 234 (265)
.++...|||.|++.+...+..+. +.+ +. .+.......+..++.+|-++.|.||.-|+++|.+++.+.
T Consensus 122 ~~~~~afPSlH~a~a~l~~~~~~-----~~~----~~----~~~~~~~~~~~~~i~~stv~~~~HY~iDv~aG~~la~~~ 188 (191)
T PF14378_consen 122 DNGVAAFPSLHVAWAVLCALALW-----RVG----RP----RWLRALFLAFNVLILFSTVYTGQHYVIDVIAGAALALLA 188 (191)
T ss_pred cccccccCchHHHHHHHHHHHHH-----Hcc----cc----HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45567899999999875444332 111 11 122234566788999999999999999999999998876
Q ss_pred H
Q 024622 235 A 235 (265)
Q Consensus 235 a 235 (265)
.
T Consensus 189 ~ 189 (191)
T PF14378_consen 189 I 189 (191)
T ss_pred H
Confidence 4
No 36
>PF14360 PAP2_C: PAP2 superfamily C-terminal
Probab=97.04 E-value=0.0043 Score=43.25 Aligned_cols=64 Identities=22% Similarity=0.121 Sum_probs=43.2
Q ss_pred CCChhHHHHHHHHHHHHHHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHH
Q 024622 161 FPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVA 235 (265)
Q Consensus 161 FPSGHas~a~~~~~~l~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a 235 (265)
+-|||++..+..+.+..-|.+++.+ ..| ......++..+..=+....||--||+.|..++..+-
T Consensus 6 iFSGHt~~~~l~~l~~~~y~~~~~~-------~~~----~~~~~~~~~~~~~ii~sr~HYTvDV~~a~~it~~~f 69 (74)
T PF14360_consen 6 IFSGHTAFLTLCALFWWEYSPRRFW-------VLK----VIMWLLAIIGSFLIIASRKHYTVDVVLAYYITSLVF 69 (74)
T ss_pred EEchhHHHHHHHHHHHHHHcccchh-------HHH----HHHHHHHHHHHHHHHHcCCCceeehhhHHHHHHHHH
Confidence 5699999998777777666443321 123 333344445555566677999999999998887764
No 37
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.82 E-value=0.049 Score=42.36 Aligned_cols=27 Identities=41% Similarity=0.578 Sum_probs=23.6
Q ss_pred CCCChhHhHHHHHHHHHHHHHHHHHhc
Q 024622 217 YWHHWQDVFAGGLLGLVVATFCYLQFF 243 (265)
Q Consensus 217 g~H~~sDVl~G~~iG~~~a~~~~~~~~ 243 (265)
-.|.|..|++|.++|++++++.+..+.
T Consensus 126 lGH~p~eV~~G~~lGI~i~~i~~~~~~ 152 (153)
T COG1963 126 LGHTPLEVFAGLLLGILIAWIFYAFFM 152 (153)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHhc
Confidence 359999999999999999999887653
No 38
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised.
Probab=96.09 E-value=0.033 Score=43.58 Aligned_cols=22 Identities=23% Similarity=0.202 Sum_probs=18.1
Q ss_pred CCCCCCChhHHHHHHHHHHHHH
Q 024622 157 GHKSFPSGHTSWSFAGLGFLSL 178 (265)
Q Consensus 157 ~~~SFPSGHas~a~~~~~~l~~ 178 (265)
+.-++||.||++..+.++.+.+
T Consensus 39 ~sGGMPSSHSA~V~aLat~ig~ 60 (141)
T PF02681_consen 39 SSGGMPSSHSATVSALATAIGL 60 (141)
T ss_pred hcCCCCchHHHHHHHHHHHHHH
Confidence 4578999999999888877765
No 39
>KOG3058 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.56 E-value=1.1 Score=40.29 Aligned_cols=123 Identities=18% Similarity=0.090 Sum_probs=66.0
Q ss_pred HHHHHHHhhhhCCCCCCccccccCCCCcccCCc-cc---cccc-CCc-cccccCCCCCCChhHHHHHHHHHHHHHHHhhh
Q 024622 110 GVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQF-NN---VICH-GDK-HVVNEGHKSFPSGHTSWSFAGLGFLSLYISGK 183 (265)
Q Consensus 110 ~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~-~~---~~c~-~~~-~~~~~~~~SFPSGHas~a~~~~~~l~~~l~~~ 183 (265)
.++-.+--..+.-|=|+.-.+|.|.....++.. .. ..-. |.. ....--+.=.-|||+...+..+.+..-|-+++
T Consensus 154 y~lR~iTm~vT~LPvP~~h~~C~~k~~~~~~~~~~r~l~~~~~~G~s~~~~~lCGDlmfSGHTlvl~~~~l~~~eY~pr~ 233 (351)
T KOG3058|consen 154 YLLRCITMYVTQLPVPGQHFRCAPKPNGDLGEFLHRALEIWSGLGLSLFGVRLCGDLMFSGHTLVLTLTALFITEYSPRR 233 (351)
T ss_pred HHHhhheeEEEecccCCCCcccCCcccccHHHHHHHHHHHHHhcCccccccCcccceeeecchHHHHHHHHHHHHhcccc
Confidence 333444445567789998899988744332210 00 0000 000 00001122346999999998888888776665
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHHHHhcC
Q 024622 184 IKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQFFP 244 (265)
Q Consensus 184 ~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~~~~~ 244 (265)
+.. .+.+..++ ++.=.+.=+..+.||--||+.++-+..-+ +..|+.+.+
T Consensus 234 ~~~-------L~~i~wll----~~~gi~~il~sr~HYTIDVvvAyyittrv-fw~yh~~a~ 282 (351)
T KOG3058|consen 234 FII-------LHWISWLL----AFVGIFLILASRKHYTIDVVVAYYITTRV-FWSYHAKAA 282 (351)
T ss_pred hhH-------HHHHHHHH----HHHHHHHHHHhCCceeEEEEEehhhHHHH-HHHHHHhcc
Confidence 431 22222222 22222334566799999999999885554 334444443
No 40
>PRK10726 hypothetical protein; Provisional
Probab=67.64 E-value=47 Score=24.45 Aligned_cols=84 Identities=10% Similarity=-0.035 Sum_probs=54.4
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHH
Q 024622 154 VNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLV 233 (265)
Q Consensus 154 ~~~~~~SFPSGHas~a~~~~~~l~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~ 233 (265)
.+|..+|+|-|=+-..++...+..-++....+..-----.|...+++.|+.+-+-|+++....|+--++=...|..++.+
T Consensus 15 ~de~s~sl~Gav~GFv~ywlA~aiPfl~YG~nTlfF~LYTWPFFLALmPvsVlvGi~l~~Ll~g~l~~s~l~t~l~V~~l 94 (105)
T PRK10726 15 DEETTWSLPGAVVGFVSWLLALAIPFLIYGSNTLFFFLYTWPFFLALMPVSVLVGIALHSLLRGKLLYSILFTLLTVGCL 94 (105)
T ss_pred ccCcccccchHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Confidence 34677999998887777665554322221110000000025566788888888889999999999999988888887776
Q ss_pred HHHH
Q 024622 234 VATF 237 (265)
Q Consensus 234 ~a~~ 237 (265)
...+
T Consensus 95 Fwll 98 (105)
T PRK10726 95 FWLL 98 (105)
T ss_pred HHHH
Confidence 6544
No 41
>PF10261 Scs3p: Inositol phospholipid synthesis and fat-storage-inducing TM; InterPro: IPR019388 This entry represents the fat storage-inducing transmembrane (FIT) family of proteins, which play an important role in lipid droplet accumulation. They are endoplasmic reticulum resident membrane proteins that induce lipid droplet accumulation in cell culture and when expressed in mouse liver []; they mediate the partitioning of triglyceride from the ER into cytosolic fatty droplets by an as-yet undetermined mechanism. The FIT family of proteins are not involved in triglyceride biosynthesis []. FIT1 and FIT2 proteins are six-transmembrane-domain containing proteins with both the N and C termini residing in the cytosol. FIT2 is the more anciently conserved homologue of the FIT family; this family of proteins do not share sequence similarity to known proteins or domains.
Probab=65.38 E-value=17 Score=31.11 Aligned_cols=25 Identities=24% Similarity=0.409 Sum_probs=20.2
Q ss_pred hCCCCChhHhHHHHHHHHHHHHHHH
Q 024622 215 DDYWHHWQDVFAGGLLGLVVATFCY 239 (265)
Q Consensus 215 ~~g~H~~sDVl~G~~iG~~~a~~~~ 239 (265)
..+-|.+..=+.|.++|.+..++.|
T Consensus 214 ~iyFHT~~EKl~Gl~~g~~~~~~~Y 238 (238)
T PF10261_consen 214 SIYFHTILEKLSGLLFGYLGWYITY 238 (238)
T ss_pred HHHHCCHHHHHHHHHHHHHhheeeC
Confidence 3458999999999999998766543
No 42
>PF12084 DUF3561: Protein of unknown function (DUF3561); InterPro: IPR022721 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=63.19 E-value=59 Score=24.05 Aligned_cols=85 Identities=14% Similarity=0.080 Sum_probs=53.1
Q ss_pred ccccCCCCCCChhHHHHHHHHHHHHHHHhhhcccccCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHH
Q 024622 153 VVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGL 232 (265)
Q Consensus 153 ~~~~~~~SFPSGHas~a~~~~~~l~~~l~~~~~~~~~~~~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~ 232 (265)
+.+|..+|||-|=+-..++...+..=++....+.------.|...+++.|+.+.+-++++....|+-..+-...+..++.
T Consensus 17 ~~de~t~sl~G~v~GF~~~wLAlaiPfl~YG~nTLfFfLYTWPFFLALmPvsVl~Gi~l~~ll~g~l~~s~~~t~l~V~~ 96 (107)
T PF12084_consen 17 EDDEPTWSLPGGVVGFVFWWLALAIPFLVYGSNTLFFFLYTWPFFLALMPVSVLIGIALSSLLRGKLLWSLLATGLAVGC 96 (107)
T ss_pred ccCCCcccccchhHHHHHHHHHHhhHHhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEeeehhhHHHHHHH
Confidence 34577899999887776665544322221110000000012556678888888888999999988888887777777776
Q ss_pred HHHHH
Q 024622 233 VVATF 237 (265)
Q Consensus 233 ~~a~~ 237 (265)
+...+
T Consensus 97 lFwll 101 (107)
T PF12084_consen 97 LFWLL 101 (107)
T ss_pred HHHHH
Confidence 65544
No 43
>KOG3750 consensus Inositol phospholipid synthesis protein, Scs3p [Lipid transport and metabolism]
Probab=62.02 E-value=28 Score=30.23 Aligned_cols=30 Identities=30% Similarity=0.572 Sum_probs=27.1
Q ss_pred hCCCCChhHhHHHHHHHHHHHHHHHHHhcC
Q 024622 215 DDYWHHWQDVFAGGLLGLVVATFCYLQFFP 244 (265)
Q Consensus 215 ~~g~H~~sDVl~G~~iG~~~a~~~~~~~~~ 244 (265)
..+.|-...=+.|++.|.+.-++.|+..++
T Consensus 218 viYyH~~~ekVig~l~g~l~W~~tY~~~y~ 247 (270)
T KOG3750|consen 218 VIYYHTLLEKVIGALTGLLTWYFTYRFWYP 247 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhheeeecc
Confidence 457899999999999999999999999988
No 44
>PF11143 DUF2919: Protein of unknown function (DUF2919); InterPro: IPR021318 This bacterial family of proteins has no known function. Some members are annotated as YfeZ however this cannot be confirmed.
Probab=54.07 E-value=70 Score=25.30 Aligned_cols=78 Identities=19% Similarity=0.337 Sum_probs=34.8
Q ss_pred CcccCcccccccchhhhhhhhHHHHHHHHHHHHHHHHhhcCCccccccCCccccCCCCCCCCCcchhhHHHHHHHHHHHH
Q 024622 2 DVQFGSHTLRSHGVVVARKHMHDWLIFLFLVVMDIILNAIDPFYRFVGKDMMTDLKYPFKNNTVPVWAVPVYAVLVPVII 81 (265)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~d~i~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~p~~~~~i~~~~l~~~~~~~p~~~ 81 (265)
+++||.|..-+....+ |.+++.++=.+.++ .+.-..|....+ .-+.-||-+++.. ......+|.++
T Consensus 3 ~~~yD~~G~Lk~P~~f-------wl~ll~laR~w~vf-v~a~~sr~~g~~-LL~lfYP~~~~f~-----lgL~~g~Pall 68 (149)
T PF11143_consen 3 PEDYDDHGRLKPPLLF-------WLVLLFLARAWVVF-VMAGASRQQGSD-LLALFYPDHSDFY-----LGLAAGLPALL 68 (149)
T ss_pred HHHhCcCCCCCccHHH-------HHHHHHHHHHHHHH-HhhccCccchhh-HHHHHcCCchHHH-----HHHHHhHHHHH
Confidence 5788888755444333 55555554222222 111111211111 1235566554322 23445667666
Q ss_pred HHHHHHhhhchH
Q 024622 82 FLIVYYHRRDVY 93 (265)
Q Consensus 82 ~l~~~~~~~~~~ 93 (265)
.....-.|++.+
T Consensus 69 ~~~l~~~R~~~~ 80 (149)
T PF11143_consen 69 LMLLSGRRHRSP 80 (149)
T ss_pred HHHHHccCCCCc
Confidence 654444444333
No 45
>PF13373 DUF2407_C: DUF2407 C-terminal domain
Probab=39.74 E-value=44 Score=26.15 Aligned_cols=30 Identities=20% Similarity=0.307 Sum_probs=23.1
Q ss_pred hCCCCChhHhHHHHHHHHHHHHHH-HHHhcC
Q 024622 215 DDYWHHWQDVFAGGLLGLVVATFC-YLQFFP 244 (265)
Q Consensus 215 ~~g~H~~sDVl~G~~iG~~~a~~~-~~~~~~ 244 (265)
....++..|.+.|.++|+++..++ +.+...
T Consensus 83 ~~~~~~~~dlL~G~liGff~g~~~~~~L~~~ 113 (140)
T PF13373_consen 83 ASNSGHNDDLLWGLLIGFFFGLFSLFWLLRE 113 (140)
T ss_pred ccccchHHHHHHHHHHHHHHHHHhHHHHhhc
Confidence 345678899999999999999998 444433
No 46
>PF06295 DUF1043: Protein of unknown function (DUF1043); InterPro: IPR009386 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=39.12 E-value=34 Score=26.25 Aligned_cols=25 Identities=12% Similarity=0.102 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCC
Q 024622 224 VFAGGLLGLVVATFCYLQFFPPPYH 248 (265)
Q Consensus 224 Vl~G~~iG~~~a~~~~~~~~~~~~~ 248 (265)
++.|+++|+++++++.|...++...
T Consensus 2 ~~i~lvvG~iiG~~~~r~~~~~~~~ 26 (128)
T PF06295_consen 2 AIIGLVVGLIIGFLIGRLTSSNQQK 26 (128)
T ss_pred hHHHHHHHHHHHHHHHHHhccchhh
Confidence 5789999999999998887766543
No 47
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=38.87 E-value=1.1e+02 Score=24.20 Aligned_cols=33 Identities=18% Similarity=0.039 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCcccccc
Q 024622 225 FAGGLLGLVVATFCYLQFFPPPYHAEGTVQVFE 257 (265)
Q Consensus 225 l~G~~iG~~~a~~~~~~~~~~~~~~~~~~~~~~ 257 (265)
+.|+++|..++++..|.+-++...++..+|...
T Consensus 107 ~~~~~~g~~~g~~~~r~~~~~~~~~~~~~P~il 139 (154)
T PRK10862 107 LCGALLGGVGGFLLARGLSRKLAARAAYQPVIL 139 (154)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCceEEE
Confidence 447788999999888888777777777777643
No 48
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=36.84 E-value=11 Score=32.99 Aligned_cols=55 Identities=16% Similarity=0.024 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHHHHhcCCC
Q 024622 192 HVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQFFPPP 246 (265)
Q Consensus 192 ~~~r~~l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~~~~~~~ 246 (265)
++|..+...+.++++++.-+--+++...|++=.+-=+-+-.+++.++|.++....
T Consensus 135 s~WtiLaFcLAF~LaivlLIIAv~L~qaWfT~L~dL~WL~LFlaiLIWlY~H~~~ 189 (381)
T PF05297_consen 135 SFWTILAFCLAFLLAIVLLIIAVLLHQAWFTILVDLYWLLLFLAILIWLYVHDQR 189 (381)
T ss_dssp -------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4455544445555566655666778888887555444555666666666555433
No 49
>PLN02248 cellulose synthase-like protein
Probab=34.91 E-value=5.9e+02 Score=27.15 Aligned_cols=55 Identities=22% Similarity=0.300 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHhhCCCC-ChhHhHHHHHHHHHHHHHHHHHhcCCCCCCCCccccc
Q 024622 201 LPLLFASLVGISRVDDYWH-HWQDVFAGGLLGLVVATFCYLQFFPPPYHAEGTVQVF 256 (265)
Q Consensus 201 ~~~~~~~lv~~sRi~~g~H-~~sDVl~G~~iG~~~a~~~~~~~~~~~~~~~~~~~~~ 256 (265)
+.-++++.+|++|+..+.+ -+++.+++.+.++.+.+..| =+++-.+.+++..|.-
T Consensus 1045 llNLvAivvGv~R~i~g~~~~~~~l~g~l~~s~Wvv~~ly-Pf~kGL~gR~gr~P~i 1100 (1135)
T PLN02248 1045 MVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLAHLY-PFAKGLMGRRGRTPTI 1100 (1135)
T ss_pred HHHHHHHHHHHHHHHhccCcchhhhHHHHHHHHHHHHHHH-HHHHHHhccCCCCCee
Confidence 3455678889999987753 23455544444433333322 2333344445555553
No 50
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.99 E-value=75 Score=23.78 Aligned_cols=41 Identities=15% Similarity=-0.041 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHHHH
Q 024622 201 LPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQ 241 (265)
Q Consensus 201 ~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~~ 241 (265)
..++++..+|+--=..-.--|--.+...++|+..+.+..+.
T Consensus 54 sGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~lnv~R 94 (116)
T COG5336 54 SGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNVLR 94 (116)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 33445555554332222334556777777777777665543
No 51
>PF14316 DUF4381: Domain of unknown function (DUF4381)
Probab=25.52 E-value=3.2e+02 Score=21.14 Aligned_cols=32 Identities=16% Similarity=0.081 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHH------HHHHHHHHHHhhhhCCCCC
Q 024622 94 DLHHAILGLLYSV------LVTGVLTDAIKIAVGRPRP 125 (265)
Q Consensus 94 ~~~~~~~~~~~~~------~~~~~i~~~lK~~~grpRP 125 (265)
..++.++.-+-.+ -...-++.++|...-..-|
T Consensus 49 ~yrr~Al~~L~~l~~~~~~~~~~~l~~LLKr~a~~~~p 86 (146)
T PF14316_consen 49 RYRREALRELAQLESSDDAEWLAALNELLKRVALQYYP 86 (146)
T ss_pred HHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHhCC
Confidence 4455555554333 3445567778876544333
No 52
>PRK11281 hypothetical protein; Provisional
Probab=23.87 E-value=8.9e+02 Score=25.95 Aligned_cols=20 Identities=10% Similarity=0.167 Sum_probs=10.0
Q ss_pred HHHHhhCCCCChhHhHHHHHH
Q 024622 210 GISRVDDYWHHWQDVFAGGLL 230 (265)
Q Consensus 210 ~~sRi~~g~H~~sDVl~G~~i 230 (265)
.++..+. .+...|++|-.+.
T Consensus 638 ~~~~~~~-~~~~~d~lg~~~~ 657 (1113)
T PRK11281 638 VVAELSP-LGLADDVIGQAVI 657 (1113)
T ss_pred HHHhhCc-hhhhhhhHHHHHH
Confidence 3344333 3456777665443
No 53
>TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase. Members of this protein family have a novel N-terminal domain, a single predicted membrane-spanning helix, and a predicted cystosolic histidine kinase domain. We designate this protein PrsK, and its companion DNA-binding response regulator protein (TIGR02915) PrsR. These predicted signal-transducing proteins appear to enable enhancer-dependent transcriptional activation. The prsK gene is often associated with exopolysaccharide biosynthesis genes.
Probab=22.96 E-value=6.5e+02 Score=24.80 Aligned_cols=73 Identities=15% Similarity=-0.041 Sum_probs=31.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhcccccCCchhHHHH-HHHHHHHHHHHHHHHHhhCCCCChhHhHHHHHHHHHHHHHHHH
Q 024622 164 GHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLC-LVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYL 240 (265)
Q Consensus 164 GHas~a~~~~~~l~~~l~~~~~~~~~~~~~~r~~-l~~~~~~~~~lv~~sRi~~g~H~~sDVl~G~~iG~~~a~~~~~ 240 (265)
+|...+.+...+..+++.++.+ +...+..+ ...+...|+...+..+....-.+..-.++.++....|..+...
T Consensus 2 ~~~~~~~~~~~~~~~l~~~~~~----~~~~~~l~~a~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~~w~~~l~~ 75 (679)
T TIGR02916 2 GYGAAAVAYLFLSLLLVTAWRQ----RLAGGLLLLAAALSAVWALASAALVYMDYPWPLLVLVLEVFRDAAWLAFLLT 75 (679)
T ss_pred hhHHHHHHHHHHHHHHHHHhcc----cchhHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666665544444444434321 11111122 2222345555555555544433333445555554554444333
No 54
>PRK11677 hypothetical protein; Provisional
Probab=21.87 E-value=95 Score=24.13 Aligned_cols=22 Identities=9% Similarity=0.147 Sum_probs=16.5
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC
Q 024622 224 VFAGGLLGLVVATFCYLQFFPP 245 (265)
Q Consensus 224 Vl~G~~iG~~~a~~~~~~~~~~ 245 (265)
.++|+++|+++++++.|...+.
T Consensus 6 a~i~livG~iiG~~~~R~~~~~ 27 (134)
T PRK11677 6 ALIGLVVGIIIGAVAMRFGNRK 27 (134)
T ss_pred HHHHHHHHHHHHHHHHhhccch
Confidence 4678888888888888865444
No 55
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=21.55 E-value=3.2e+02 Score=21.59 Aligned_cols=32 Identities=19% Similarity=0.181 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCCCCCcccc
Q 024622 224 VFAGGLLGLVVATFCYLQFFPPPYHAEGTVQV 255 (265)
Q Consensus 224 Vl~G~~iG~~~a~~~~~~~~~~~~~~~~~~~~ 255 (265)
++.|+++|.+.+++..+.|-++...+..++|.
T Consensus 106 ~~~~~~lg~~l~fl~~r~ysRkl~~~~~~QpV 137 (150)
T COG3086 106 VIFGAFLGLALGFLLARRYSRKLAKRTEWQPV 137 (150)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccCCCe
Confidence 56788999999999999998887777777776
No 56
>PF04238 DUF420: Protein of unknown function (DUF420); InterPro: IPR007352 This is a predicted membrane protein with four transmembrane helices.
Probab=21.12 E-value=4e+02 Score=20.60 Aligned_cols=45 Identities=16% Similarity=0.208 Sum_probs=30.4
Q ss_pred HHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCC
Q 024622 82 FLIVYYHRRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPN 126 (265)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lK~~~grpRP~ 126 (265)
+..+...||+..+.++......++.....++....|...+...+.
T Consensus 20 ~~g~~~Ir~~~~~~Hr~~Ml~a~~ls~lFlv~Yl~~~~~~g~~~f 64 (133)
T PF04238_consen 20 LIGWYFIRRGRIKLHRKLMLTAFVLSALFLVSYLYYHFLGGSTPF 64 (133)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 333444455555777777777777777778888888888766664
Done!