BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024625
(265 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 92/176 (52%), Gaps = 28/176 (15%)
Query: 93 GYSSFRGKRATMED--------FYDIKTSNVDGQ-----AVCMFGVFDGHGGSRAAEYLK 139
G++S G+R MED S +DG+ A FGV+DGHGGS+ A Y +
Sbjct: 12 GFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCR 71
Query: 140 EH----LFENLLKHPQFMTDT-------KLAISETYQQTDVDFLESERDTYRDDGSTAST 188
E L E + K ++D K A+ ++ + D + +T GST+
Sbjct: 72 ERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESVAPETV---GSTSVV 128
Query: 189 AILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG-VVMWAG 243
A++ +H++VAN GDSR V+ + A+PLS DHKP+R DE RIE AGG V+ W G
Sbjct: 129 AVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNG 184
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 91/176 (51%), Gaps = 28/176 (15%)
Query: 93 GYSSFRGKRATMED--------FYDIKTSNVDGQ-----AVCMFGVFDGHGGSRAAEYLK 139
G++S G+R MED S +DG+ A FGV+DGHGGS+ A Y +
Sbjct: 27 GFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCR 86
Query: 140 EH----LFENLLKHPQFMTDT-------KLAISETYQQTDVDFLESERDTYRDDGSTAST 188
E L E + K + D K A+ ++ + D + +T GST+
Sbjct: 87 ERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIESVAPETV---GSTSVV 143
Query: 189 AILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG-VVMWAG 243
A++ +H++VAN GDSR V+ + A+PLS DHKP+R DE RIE AGG V+ W G
Sbjct: 144 AVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNG 199
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 91/176 (51%), Gaps = 28/176 (15%)
Query: 93 GYSSFRGKRATMED--------FYDIKTSNVDGQ-----AVCMFGVFDGHGGSRAAEYLK 139
G++S G+R MED S +DG+ A FGV+DGHGGS+ A Y +
Sbjct: 15 GFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCR 74
Query: 140 EH----LFENLLKHPQFMTDT-------KLAISETYQQTDVDFLESERDTYRDDGSTAST 188
E L E + K + D K A+ ++ + D + +T GST+
Sbjct: 75 ERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIESVAPETV---GSTSVV 131
Query: 189 AILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG-VVMWAG 243
A++ +H++VAN GDSR V+ + A+PLS DHKP+R DE RIE AGG V+ W G
Sbjct: 132 AVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNG 187
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 93/193 (48%), Gaps = 25/193 (12%)
Query: 76 GGYVSGGWKSEDGK------LRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGH 129
G Y+S ++D L G SS +G R + ED ++ N D Q F V+DGH
Sbjct: 3 GAYLSEPLTTKDSSDESNEFLASGSSSMQGWRISQEDAHNC-ILNFDDQCS-FFAVYDGH 60
Query: 130 GGSRAAEYLKEHL--------------FENLLKHPQFMTDTKLAISETYQQTDV---DFL 172
GG+ A+Y HL FE LK D L + ++ V D
Sbjct: 61 GGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSA 120
Query: 173 ESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRI 232
S+ + +D G TA A+L G LYVAN GDSR V+ + GKA+ +S DHKP E +RI
Sbjct: 121 GSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVEYQRI 180
Query: 233 ENAGGVVMWAGKI 245
E AGG V G++
Sbjct: 181 EKAGGRVTLDGRV 193
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 96/180 (53%), Gaps = 30/180 (16%)
Query: 93 GYSSFRGKRATMED-------FYDIKTSNV-DGQ---------AVCMFGVFDGHGGSRAA 135
G +S G+R MED F + +S++ DG+ + FGV+DGHGGS+ A
Sbjct: 15 GVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHLSAHFFGVYDGHGGSQVA 74
Query: 136 EYLKEH----LFENLLKH-PQFMT-DT-----KLAISETYQQTDVDFLESERDTYRDDGS 184
Y +E L E ++K P+F DT K A+ ++ + D + +E+ GS
Sbjct: 75 NYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSE-IETVAHAPETVGS 133
Query: 185 TASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG-VVMWAG 243
T+ A++ H++VAN GDSR V+ + + LS DHKP+R DE RIE AGG V+ W G
Sbjct: 134 TSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAGGKVIRWNG 193
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 90 LRCGYSSFRGKRATMEDFYDIKTSNVDG-QAVCMFGVFDGHGGSRAAEYLKEHLFENLLK 148
LR G SS +G R MED + G + F V+DGH GSR A Y HL E++
Sbjct: 24 LRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITT 83
Query: 149 HPQFMTDTK------LAISETYQQTDVDFLESE---------RDTYRDDGSTASTAILVG 193
+ F K L++ FL+ + R+ GSTA ++
Sbjct: 84 NEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISP 143
Query: 194 NHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVM 240
H+Y N GDSR V+ + G+ ++DHKP E++RI+NAGG VM
Sbjct: 144 KHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVM 190
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 76/154 (49%), Gaps = 8/154 (5%)
Query: 93 GYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHL----FENLLK 148
G +S GKR ED +D V F V+DGHGG AA++ H+ + L K
Sbjct: 11 GCASQIGKRKENEDRFDFAQLT---DEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK 67
Query: 149 HPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILV-GNHLYVANVGDSRTV 207
T LA E + S T G+TA+ A+L G L VA+VGDSR +
Sbjct: 68 EKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAI 127
Query: 208 ISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMW 241
+ + GK + L+ DH P R DE++RI+ GG V W
Sbjct: 128 LCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAW 161
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 90 LRCGYSSFRGKRATMEDFYDIKTSNVDG-QAVCMFGVFDGHGGSRAAEYLKEHLFENLLK 148
LR G SS +G R MED + G ++ F V+DGH GS+ A+Y EHL +++
Sbjct: 22 LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITN 81
Query: 149 HPQF--------MTDTKLAISETYQQTDVDF-LESERDTYRD-DGSTASTAILVGNHLYV 198
+ F + + K I + + D + SE+ D GSTA ++ H Y
Sbjct: 82 NQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYF 141
Query: 199 ANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVM 240
N GDSR ++ + K ++DHKP+ E++RI+NAGG VM
Sbjct: 142 INCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM 183
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 90 LRCGYSSFRGKRATMEDFYDIKTSNVDG-QAVCMFGVFDGHGGSRAAEYLKEHLFENLLK 148
LR G SS +G R MED + G ++ F V+DGH GS+ A+Y EHL +++
Sbjct: 22 LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITN 81
Query: 149 HPQF--------MTDTKLAISETYQQTDVDF-LESERDTYRD-DGSTASTAILVGNHLYV 198
+ F + + K I + + D + SE+ D GSTA ++ H Y
Sbjct: 82 NQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYF 141
Query: 199 ANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVM 240
N GDSR ++ + K ++DHKP+ E++RI+NAGG VM
Sbjct: 142 INCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM 183
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 76/154 (49%), Gaps = 8/154 (5%)
Query: 93 GYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHL----FENLLK 148
G +S GKR ED +D V F V+DGHGG AA++ H+ + L K
Sbjct: 125 GCASQIGKRKENEDRFDFAQLT---DEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK 181
Query: 149 HPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILV-GNHLYVANVGDSRTV 207
T LA E + S T G+TA+ A+L G L VA+VGDSR +
Sbjct: 182 EKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAI 241
Query: 208 ISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMW 241
+ + GK + L+ DH P R DE++RI+ GG V W
Sbjct: 242 LCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAW 275
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 89/197 (45%), Gaps = 46/197 (23%)
Query: 93 GYSSFRGKRATMEDFY---------DIKTSNVDGQAVC---------MFGVFDGHGGSRA 134
G S +G R+ MED + IK D + + FGV+DGHGG +
Sbjct: 20 GTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKV 79
Query: 135 AEYLKEHLFENLLKHPQFMTD--TKLAISETYQ-QTDVDFLES----------------- 174
A+Y ++ L L + + + D +K E Q Q D F
Sbjct: 80 ADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVV 139
Query: 175 -------ERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCD 227
E GSTA A++ +H+ V+N GDSR V+ + +A+PLS DHKP+R D
Sbjct: 140 GSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRED 199
Query: 228 ERKRIENAGG-VVMWAG 243
E RIENAGG V+ W G
Sbjct: 200 EYARIENAGGKVIQWQG 216
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 88/197 (44%), Gaps = 46/197 (23%)
Query: 93 GYSSFRGKRATMEDFY---------DIKTSNVDGQAVC---------MFGVFDGHGGSRA 134
G S +G R+ MED + IK D + + FGV+DGHGG +
Sbjct: 23 GTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKV 82
Query: 135 AEYLKEHLFENLLKHPQFMTD--TKLAISETYQ-QTDVDFLES----------------- 174
A+Y ++ L L + + + D K E Q Q D F
Sbjct: 83 ADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVV 142
Query: 175 -------ERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCD 227
E GSTA A++ +H+ V+N GDSR V+ + +A+PLS DHKP+R D
Sbjct: 143 GSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRED 202
Query: 228 ERKRIENAGG-VVMWAG 243
E RIENAGG V+ W G
Sbjct: 203 EYARIENAGGKVIQWQG 219
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 88/197 (44%), Gaps = 46/197 (23%)
Query: 93 GYSSFRGKRATMEDFY---------DIKTSNVDGQAVC---------MFGVFDGHGGSRA 134
G S +G R+ MED + IK D + + FGV+DGHGG +
Sbjct: 6 GTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKV 65
Query: 135 AEYLKEHLFENLLKHPQFMTD--TKLAISETYQ-QTDVDFLES----------------- 174
A+Y ++ L L + + + D K E Q Q D F
Sbjct: 66 ADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVV 125
Query: 175 -------ERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCD 227
E GSTA A++ +H+ V+N GDSR V+ + +A+PLS DHKP+R D
Sbjct: 126 GSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRED 185
Query: 228 ERKRIENAGG-VVMWAG 243
E RIENAGG V+ W G
Sbjct: 186 EYARIENAGGKVIQWQG 202
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 88/197 (44%), Gaps = 46/197 (23%)
Query: 93 GYSSFRGKRATMEDFY---------DIKTSNVDGQAVC---------MFGVFDGHGGSRA 134
G S +G R+ MED + IK D + + FGV+DGHGG +
Sbjct: 17 GTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKV 76
Query: 135 AEYLKEHLFENLLKHPQFMTD--TKLAISETYQ-QTDVDFLES----------------- 174
A+Y ++ L L + + + D K E Q Q D F
Sbjct: 77 ADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVV 136
Query: 175 -------ERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCD 227
E GSTA A++ +H+ V+N GDSR V+ + +A+PLS DHKP+R D
Sbjct: 137 GSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRED 196
Query: 228 ERKRIENAGG-VVMWAG 243
E RIENAGG V+ W G
Sbjct: 197 EYARIENAGGKVIQWQG 213
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 88/197 (44%), Gaps = 46/197 (23%)
Query: 93 GYSSFRGKRATMEDFY---------DIKTSNVDGQAVC---------MFGVFDGHGGSRA 134
G S +G R+ MED + IK D + + FGV+DGHGG +
Sbjct: 21 GTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKV 80
Query: 135 AEYLKEHLFENLLKHPQFMTD--TKLAISETYQ-QTDVDFLES----------------- 174
A+Y ++ L L + + + D K E Q Q D F
Sbjct: 81 ADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVV 140
Query: 175 -------ERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCD 227
E GSTA A++ +H+ V+N GDSR V+ + +A+PLS DHKP+R D
Sbjct: 141 GSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRED 200
Query: 228 ERKRIENAGG-VVMWAG 243
E RIENAGG V+ W G
Sbjct: 201 EYARIENAGGKVIQWQG 217
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 88/197 (44%), Gaps = 46/197 (23%)
Query: 93 GYSSFRGKRATMEDFY---------DIKTSNVDGQAVC---------MFGVFDGHGGSRA 134
G S +G R+ MED + IK D + + FGV+DGHGG +
Sbjct: 30 GTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKV 89
Query: 135 AEYLKEHLFENLLKHPQFMTD--TKLAISETYQ-QTDVDFLES----------------- 174
A+Y ++ L L + + + D K E Q Q D F
Sbjct: 90 ADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVV 149
Query: 175 -------ERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCD 227
E GSTA A++ +H+ V+N GDSR V+ + +A+PLS DHKP+R D
Sbjct: 150 GSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRED 209
Query: 228 ERKRIENAGG-VVMWAG 243
E RIENAGG V+ W G
Sbjct: 210 EYARIENAGGKVIQWQG 226
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 32/172 (18%)
Query: 99 GKRATMEDFYDIKTSNVDGQAVC-MFGVFDGHGGSRAAEYLKEHLFENLLKHPQFM---- 153
G R ED + + V G+ C FGVFDG G A+E +K+ + L+ P +
Sbjct: 31 GGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTE 90
Query: 154 ----------TDTKL------AISETYQQTDVDFLESERDTYRDDGSTAS-TAILVGNHL 196
D KL A+ + Y+ D + ++ +D S+ S TA+L +
Sbjct: 91 XLRSDVPATEVDEKLPQLLDQAVDDXYKNADNELVKXCEQLNKDYASSTSVTAVLAKGFV 150
Query: 197 YVANVGDSRTVISKAGKAIP-------LSEDHKPNRCDERKRIENAGGVVMW 241
V ++GDSR G P L+ DHKP+ E+ RI GG V +
Sbjct: 151 AVGHLGDSRIA---XGVETPNGLNCEFLTVDHKPDXPHEKLRIXRNGGSVEY 199
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 32/151 (21%)
Query: 122 MFGVFDGHGGSRAAEYLKEHLFENLL------KHPQFMTDTKLAISETYQQTDVDFLESE 175
++GVF+G+ G+R ++ + L LL +H + D + + + + + FLES
Sbjct: 66 LYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAE--ADVRRVLLQAFDVVERSFLESI 123
Query: 176 RDTYRDD-----------------GSTASTAILVGNHLYVANVGDSRTVISKAG----KA 214
D + G+ A A+L+ N LYVANVG +R ++ K+ +
Sbjct: 124 DDALAEKASLQLERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQV 183
Query: 215 IPLSEDHKPNRCDERKRIENAGGVVMWAGKI 245
L+ DH DE R+ G + AGKI
Sbjct: 184 TQLNVDHTTENEDELFRLSQLG---LDAGKI 211
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 190 ILVGNHLYVA-NVGDSR-TVISKAGKAIPLSEDHKPNRCDERKRIENAGGVV 239
I G+ L A N+GDSR T+I G LS+DHKPN E RIE AGG V
Sbjct: 168 IPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSV 219
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 99 GKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQF 152
G+R T ED + V + VFDGH G ++Y +H ++L K +F
Sbjct: 22 GRRPTDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLSEF 75
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 51/170 (30%)
Query: 122 MFGVFDGHGGSRAAEYLKEHLFENLL------KHPQFMTDTKLAISETYQQTDVDFLESE 175
++GVF+G+ G+R ++ + L LL +H + D + + + + + FLES
Sbjct: 66 LYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAE--ADVRRVLLQAFDVVERSFLESI 123
Query: 176 RDTYRDD------------------------------------GSTASTAILVGNHLYVA 199
D + G+ A A+L+ N LYVA
Sbjct: 124 DDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVA 183
Query: 200 NVGDSRTVISKAG----KAIPLSEDHKPNRCDERKRIENAGGVVMWAGKI 245
NVG +R ++ K+ + L+ DH DE R+ G + AGKI
Sbjct: 184 NVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLG---LDAGKI 230
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 51/170 (30%)
Query: 122 MFGVFDGHGGSRAAEYLKEHLFENLL------KHPQFMTDTKLAISETYQQTDVDFLESE 175
++GVF+G+ G+R ++ + L LL +H + D + + + + + FLES
Sbjct: 64 LYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAE--ADVRRVLLQAFDVVERSFLESI 121
Query: 176 RDTYRDD------------------------------------GSTASTAILVGNHLYVA 199
D + G+ A A+L+ N LYVA
Sbjct: 122 DDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVA 181
Query: 200 NVGDSRTVISKAG----KAIPLSEDHKPNRCDERKRIENAGGVVMWAGKI 245
NVG +R ++ K+ + L+ DH DE R+ G + AGKI
Sbjct: 182 NVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLG---LDAGKI 228
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|B Chain B, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|C Chain C, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|D Chain D, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
Length = 377
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 196 LYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGV 238
++VA++G+SR V+ AI LS H + ER R++ AGGV
Sbjct: 168 IHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGV 210
>pdb|2PK0|A Chain A, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|B Chain B, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|C Chain C, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|D Chain D, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
Length = 250
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 100 KRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENL--------LKHPQ 151
+R+ +DF + + N G V + + DG GG RA E +L
Sbjct: 17 RRSNNQDFIN-QFENKAG--VPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELS 73
Query: 152 FMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKA 211
+ D L ET + + +S D Y+ G+T +VG+++ A+VGDSR I +
Sbjct: 74 EIRDWMLVSIETENRKIYELGQS--DDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQ 131
Query: 212 GKAIPLSEDH 221
G+ L+ DH
Sbjct: 132 GEYHLLTSDH 141
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase
Kinase Kinase 7 Interacting Protein 1 From Anopheles
Gambiae
Length = 358
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 22/87 (25%)
Query: 183 GSTASTAILVGNHLYVANVGDSRTVISKAGK-----AIPLSEDHKPNRCDERKRIENAGG 237
GS+A A++ +HLY+ N+G+ R ++ K + LS DH +E R+ G
Sbjct: 154 GSSAVLALIHRSHLYLGNIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLG- 212
Query: 238 VVMWAGKITNTSPLLLMQRNFK-LPVY 263
LM +NF+ +P+Y
Sbjct: 213 ---------------LMAQNFEGVPLY 224
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 183 GSTASTAILVGNHLYVANVGDSRTVI-----SKAGKAIPLSEDHKPNRCDERKRIE 233
G+TA A + G L+VAN GDSR ++ + A+ LS DH E +R++
Sbjct: 200 GATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLK 255
Score = 28.1 bits (61), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 122 MFGVFDGHGGSRAAEYLKEHLF 143
+ GVFDGH G ++ + E LF
Sbjct: 68 LLGVFDGHAGCACSQAVSERLF 89
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 183 GSTASTAILVGNHLYVANVGDSRTVI-----SKAGKAIPLSEDHKPNRCDERKRIE 233
G+TA A + G L+VAN GDSR ++ + A+ LS DH E +R++
Sbjct: 200 GATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREVERLK 255
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 122 MFGVFDGHGGSRAAEYLKEHLF 143
+ GVFDGH G ++ + E LF
Sbjct: 68 LLGVFDGHAGCACSQAVSERLF 89
>pdb|2XZV|A Chain A, The Cyanobacterial Pp2c-Like Phosphatase Tppha Requires
Three Metals In The Catalytic Center For Efficient
Catalysis
Length = 240
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 128 GH-GGSRAAEYLKEHLFENLLKHPQ-FMTDTKLAISETYQQTDVDFLESER-DTYRDDGS 184
GH GG A+ +H+ + L H + D + + + + +E +R ++ R D
Sbjct: 38 GHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQAFLAANHAIVEQQRQNSARADMG 97
Query: 185 TASTAILV---GNHLYVANVGDSRTVISKAGKAIPLSEDH 221
T + IL+ G+ + A+VGDSR + + ++ DH
Sbjct: 98 TTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDH 137
>pdb|2J82|A Chain A, Structural Analysis Of The Pp2c Family Phosphatase Tppha
From Thermosynechococcus Elongatus
pdb|2J86|A Chain A, Structural Analysis Of The Pp2c Family Phosphatase Tppha
Of Thermosynechococcus Elongatus
pdb|2J86|B Chain B, Structural Analysis Of The Pp2c Family Phosphatase Tppha
Of Thermosynechococcus Elongatus
Length = 240
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 128 GH-GGSRAAEYLKEHLFENLLKHPQ-FMTDTKLAISETYQQTDVDFLESER-DTYRDDGS 184
GH GG A+ +H+ + L H + D + + + + +E +R ++ R D
Sbjct: 38 GHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQAFLAANHAIVEQQRQNSARADMG 97
Query: 185 TASTAILV---GNHLYVANVGDSRTVISKAGKAIPLSEDH 221
T + IL+ G+ + A+VGDSR + + ++ DH
Sbjct: 98 TTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDH 137
>pdb|3H38|A Chain A, The Structure Of Cca-Adding Enzyme Apo Form Ii
pdb|3H39|A Chain A, The Complex Structure Of Cca-Adding Enzyme With Atp
pdb|3H39|B Chain B, The Complex Structure Of Cca-Adding Enzyme With Atp
pdb|3H3A|A Chain A, The Complex Structure Of Cca-Adding Enzyme With Ctp
pdb|3H3A|B Chain B, The Complex Structure Of Cca-Adding Enzyme With Ctp
Length = 441
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 15/71 (21%)
Query: 135 AEYLKEHLFENLLKHPQFMT-----------DTKLAISETYQQ----TDVDFLESERDTY 179
AEY K L L+KH +FMT D A E Y+ DV+ ++D Y
Sbjct: 68 AEYAKRFLPGKLVKHDKFMTASLFLKGGLRIDIATARLEYYESPAKLPDVEMSTIKKDLY 127
Query: 180 RDDGSTASTAI 190
R D + + AI
Sbjct: 128 RRDFTINAMAI 138
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,929,380
Number of Sequences: 62578
Number of extensions: 332030
Number of successful extensions: 886
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 833
Number of HSP's gapped (non-prelim): 43
length of query: 265
length of database: 14,973,337
effective HSP length: 97
effective length of query: 168
effective length of database: 8,903,271
effective search space: 1495749528
effective search space used: 1495749528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)