Query 024625
Match_columns 265
No_of_seqs 244 out of 1362
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 06:09:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024625.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024625hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0697 Protein phosphatase 1B 100.0 7E-48 1.5E-52 335.8 14.5 191 62-264 1-203 (379)
2 KOG0698 Serine/threonine prote 100.0 6.7E-38 1.4E-42 288.3 19.0 172 91-264 41-224 (330)
3 PLN03145 Protein phosphatase 2 100.0 1.9E-37 4.2E-42 287.9 19.6 171 89-263 64-243 (365)
4 PF00481 PP2C: Protein phospha 100.0 7.5E-38 1.6E-42 277.6 14.1 171 91-264 1-179 (254)
5 KOG0699 Serine/threonine prote 100.0 1.1E-37 2.4E-42 280.2 11.6 190 62-264 1-409 (542)
6 PTZ00224 protein phosphatase 2 100.0 4.1E-34 8.9E-39 266.7 21.0 163 87-263 19-182 (381)
7 KOG0700 Protein phosphatase 2C 100.0 4.7E-31 1E-35 241.5 13.4 159 103-264 84-291 (390)
8 COG0631 PTC1 Serine/threonine 100.0 6.3E-30 1.4E-34 228.4 12.2 167 89-263 7-182 (262)
9 cd00143 PP2Cc Serine/threonine 99.9 7.6E-26 1.7E-30 197.9 18.9 167 91-262 2-175 (254)
10 smart00332 PP2Cc Serine/threon 99.9 1.8E-25 3.9E-30 196.3 19.7 167 90-262 6-178 (255)
11 PRK14559 putative protein seri 99.9 9.6E-25 2.1E-29 214.7 14.8 165 89-262 374-557 (645)
12 KOG1323 Serine/threonine phosp 99.8 1.6E-19 3.6E-24 161.7 11.8 118 117-236 141-298 (493)
13 PF13672 PP2C_2: Protein phosp 99.6 5.2E-14 1.1E-18 120.9 12.4 125 95-223 3-139 (212)
14 KOG0618 Serine/threonine phosp 99.4 4.5E-13 9.8E-18 133.8 7.0 167 90-264 522-697 (1081)
15 smart00331 PP2C_SIG Sigma fact 99.1 9.7E-10 2.1E-14 92.9 12.0 111 102-222 15-128 (193)
16 KOG1379 Serine/threonine prote 99.1 1.8E-09 4E-14 97.0 12.1 109 103-221 90-208 (330)
17 TIGR02865 spore_II_E stage II 97.9 0.00013 2.9E-09 74.5 13.1 117 98-224 561-679 (764)
18 PF07228 SpoIIE: Stage II spor 97.5 0.002 4.4E-08 53.9 12.0 99 119-223 3-105 (193)
19 PRK10693 response regulator of 73.2 43 0.00093 30.3 10.4 50 161-214 208-259 (303)
20 COG1659 Uncharacterized protei 28.3 65 0.0014 28.2 3.2 36 227-265 192-228 (267)
21 COG3342 Uncharacterized conser 20.1 3.4E+02 0.0073 24.3 6.1 22 213-234 180-201 (265)
No 1
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=7e-48 Score=335.77 Aligned_cols=191 Identities=32% Similarity=0.457 Sum_probs=168.6
Q ss_pred CCCccccCC-cccCCCccccCccccCCCCeEEEEecccCCCCcceeeEeeeccCC-CCcceEEEEEeCCCCCchHHHHHH
Q 024625 62 RGPIVDVLP-EKEDDGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNV-DGQAVCMFGVFDGHGGSRAAEYLK 139 (265)
Q Consensus 62 ~~~~~~~~~-~~~~~~g~~~g~~~~~~~~~~~g~~s~~G~R~~~ED~~~v~~~~~-~~~~~~lf~VfDGHGG~~aa~~a~ 139 (265)
||.|++||. +|.+..| +.+.++||.+||||||.+|||+|....... +-.+|+||||||||.|+.+|.+|+
T Consensus 1 MGaFLdKPkteKhn~~G--------~GNglryg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~ 72 (379)
T KOG0697|consen 1 MGAFLDKPKTEKHNAEG--------EGNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCA 72 (379)
T ss_pred CCccccCcccccccccC--------cCCceeeeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHH
Confidence 799999995 6666555 346799999999999999999998765433 336899999999999999999999
Q ss_pred HHHHHHHHcCCCCcc--------cHHHHHHHHHHHHHHHHHHhh--cCCCCCCCceEEEEEEECCEEEEEEECcCceEEE
Q 024625 140 EHLFENLLKHPQFMT--------DTKLAISETYQQTDVDFLESE--RDTYRDDGSTASTAILVGNHLYVANVGDSRTVIS 209 (265)
Q Consensus 140 ~~l~~~l~~~~~~~~--------~~~~~l~~af~~~d~~i~~~~--~~~~~~~GsTa~~~li~~~~l~vAnvGDSRa~l~ 209 (265)
++|++.|.+..+|.. +.+.-|+..|+++|+.+.... .....++||||+++++.+.++|++|||||||+|+
T Consensus 73 ~hLlehi~sse~F~~~~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~ 152 (379)
T KOG0697|consen 73 EHLLEHIISSEEFRGMTKNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLC 152 (379)
T ss_pred HHHHHHhhhhHHHhhhccCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhhee
Confidence 999999998766553 778899999999999887632 2333569999999999999999999999999999
Q ss_pred eCCeEEecCCCCCCCCHHHHHHHHHcCCEEEeCCcccccCCccccccccCCcccC
Q 024625 210 KAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGKITNTSPLLLMQRNFKLPVYL 264 (265)
Q Consensus 210 r~g~~~~LT~DH~p~~~~E~~RI~~aGG~v~~~g~~R~v~G~LavSRa~GD~~l~ 264 (265)
|+|+++.-|+||+|.+|.|++||++|||.|+.+ | |||.||||||||||.|.
T Consensus 153 rng~~~f~TqDHKP~~p~EkeRIqnAGGSVMIq---R-vNGsLAVSRAlGDydyK 203 (379)
T KOG0697|consen 153 RNGEVVFSTQDHKPYLPKEKERIQNAGGSVMIQ---R-VNGSLAVSRALGDYDYK 203 (379)
T ss_pred cCCceEEeccCCCCCChHHHHHHhcCCCeEEEE---E-ecceeeeehhccCcccc
Confidence 999999999999999999999999999999987 8 99999999999999875
No 2
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-38 Score=288.34 Aligned_cols=172 Identities=44% Similarity=0.629 Sum_probs=149.9
Q ss_pred EEEEecccCCCCcceeeEeeeccC----CCCc-ceEEEEEeCCCCCchHHHHHHHHHHHHHHcCCCCcc---cHHHHHHH
Q 024625 91 RCGYSSFRGKRATMEDFYDIKTSN----VDGQ-AVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMT---DTKLAISE 162 (265)
Q Consensus 91 ~~g~~s~~G~R~~~ED~~~v~~~~----~~~~-~~~lf~VfDGHGG~~aa~~a~~~l~~~l~~~~~~~~---~~~~~l~~ 162 (265)
..+.++.+|+|..|||.+...... ..+. ...||||||||||+.+|+|+.++|+..+.+...+.. +.+.++++
T Consensus 41 ~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~ 120 (330)
T KOG0698|consen 41 LGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRR 120 (330)
T ss_pred ceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHH
Confidence 455568999999999999887652 2334 589999999999999999999999999999887765 47999999
Q ss_pred HHH-HHHHHHHHhhcCCCCCCCceEEEEEEECC-EEEEEEECcCceEEEeCC-eEEecCCCCCCCCHHHHHHHHHcCCEE
Q 024625 163 TYQ-QTDVDFLESERDTYRDDGSTASTAILVGN-HLYVANVGDSRTVISKAG-KAIPLSEDHKPNRCDERKRIENAGGVV 239 (265)
Q Consensus 163 af~-~~d~~i~~~~~~~~~~~GsTa~~~li~~~-~l~vAnvGDSRa~l~r~g-~~~~LT~DH~p~~~~E~~RI~~aGG~v 239 (265)
+|. ++|..+.+. ......+|||++++++.++ ++||||+|||||||++++ ++++||.||+|++++|++||+++||+|
T Consensus 121 ~F~~~~D~~~~~~-~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v 199 (330)
T KOG0698|consen 121 AFLTKTDSEFLEK-REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGRV 199 (330)
T ss_pred HHHHHHHHHHHhh-ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEE
Confidence 999 699999875 2224578999999999865 999999999999999866 899999999999999999999999999
Q ss_pred EeC-CcccccCCccccccccCCcccC
Q 024625 240 MWA-GKITNTSPLLLMQRNFKLPVYL 264 (265)
Q Consensus 240 ~~~-g~~R~v~G~LavSRa~GD~~l~ 264 (265)
.+. +.|| |+|.|||||+|||+.|.
T Consensus 200 ~~~~~~~R-v~G~LavsRa~GD~~~k 224 (330)
T KOG0698|consen 200 SNWGGVWR-VNGVLAVSRAFGDVELK 224 (330)
T ss_pred EEcCCcce-EeceEEEeeecCCHHhc
Confidence 854 4689 99999999999999875
No 3
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=1.9e-37 Score=287.94 Aligned_cols=171 Identities=37% Similarity=0.529 Sum_probs=149.8
Q ss_pred CeEEEEecccCCCCcceeeEeeeccCC--------CCcceEEEEEeCCCCCchHHHHHHHHHHHHHHcCCCCcccHHHHH
Q 024625 89 KLRCGYSSFRGKRATMEDFYDIKTSNV--------DGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAI 160 (265)
Q Consensus 89 ~~~~g~~s~~G~R~~~ED~~~v~~~~~--------~~~~~~lf~VfDGHGG~~aa~~a~~~l~~~l~~~~~~~~~~~~~l 160 (265)
.++++..+++|.|+.|||++.+..+.. ...+..||||||||||+.+|+||+++|++.|.+...+..+++++|
T Consensus 64 ~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~al 143 (365)
T PLN03145 64 VVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEKVV 143 (365)
T ss_pred ceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHHHH
Confidence 478999999999999999988755321 123468999999999999999999999999988766666788899
Q ss_pred HHHHHHHHHHHHHhhc-CCCCCCCceEEEEEEECCEEEEEEECcCceEEEeCCeEEecCCCCCCCCHHHHHHHHHcCCEE
Q 024625 161 SETYQQTDVDFLESER-DTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVV 239 (265)
Q Consensus 161 ~~af~~~d~~i~~~~~-~~~~~~GsTa~~~li~~~~l~vAnvGDSRa~l~r~g~~~~LT~DH~p~~~~E~~RI~~aGG~v 239 (265)
.++|..+|+.+.+... .....+|||+++++|.++++|||||||||+|+++++++++||+||+|.++.|++||+++||.|
T Consensus 144 ~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~v 223 (365)
T PLN03145 144 SSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYV 223 (365)
T ss_pred HHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCce
Confidence 9999999999876432 233459999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCcccccCCccccccccCCccc
Q 024625 240 MWAGKITNTSPLLLMQRNFKLPVY 263 (265)
Q Consensus 240 ~~~g~~R~v~G~LavSRa~GD~~l 263 (265)
.. | | ++|.|++||+|||+.+
T Consensus 224 ~~-g--~-v~g~l~vTRalGD~~~ 243 (365)
T PLN03145 224 YD-G--Y-LNGQLNVARALGDWHM 243 (365)
T ss_pred ec-c--e-ECCccccccccccccc
Confidence 64 3 7 9999999999999765
No 4
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=7.5e-38 Score=277.63 Aligned_cols=171 Identities=40% Similarity=0.552 Sum_probs=143.9
Q ss_pred EEEEecccCCCCcceeeEeeeccCC---CCcceEEEEEeCCCCCchHHHHHHHHHHHHHHcCCCCcc--cHHHHHHHHHH
Q 024625 91 RCGYSSFRGKRATMEDFYDIKTSNV---DGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMT--DTKLAISETYQ 165 (265)
Q Consensus 91 ~~g~~s~~G~R~~~ED~~~v~~~~~---~~~~~~lf~VfDGHGG~~aa~~a~~~l~~~l~~~~~~~~--~~~~~l~~af~ 165 (265)
.|++.+++|+|++|||.+.+..+.. ......+|+|||||||..+++|++++|++.|.+...+.. ++.++|..+|.
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~ 80 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFL 80 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceee
Confidence 4789999999999999999887543 345789999999999999999999999988877654433 58899999999
Q ss_pred H-HHHHHHHhhcC-CCCCCCceEEEEEEECCEEEEEEECcCceEEEeCCeEE-ecCCCCCCCCHHHHHHHHHcCCEEEeC
Q 024625 166 Q-TDVDFLESERD-TYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAI-PLSEDHKPNRCDERKRIENAGGVVMWA 242 (265)
Q Consensus 166 ~-~d~~i~~~~~~-~~~~~GsTa~~~li~~~~l~vAnvGDSRa~l~r~g~~~-~LT~DH~p~~~~E~~RI~~aGG~v~~~ 242 (265)
. ++..+...... ....+||||++++|.++++|+||||||||||++++... +||+||+|+++.|++||+++||.|..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~- 159 (254)
T PF00481_consen 81 AFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVSE- 159 (254)
T ss_dssp HHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEEE-
T ss_pred ecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeecccccccc-
Confidence 9 88888763211 45689999999999999999999999999999999988 99999999999999999999999987
Q ss_pred CcccccCCccccccccCCcccC
Q 024625 243 GKITNTSPLLLMQRNFKLPVYL 264 (265)
Q Consensus 243 g~~R~v~G~LavSRa~GD~~l~ 264 (265)
.+| ++|.|++||+|||+.+.
T Consensus 160 -~~r-v~g~l~~sRalGd~~~k 179 (254)
T PF00481_consen 160 -NGR-VNGVLAVSRALGDFDLK 179 (254)
T ss_dssp -TEE-ETTTBSSSB-EE-GGGT
T ss_pred -chh-hhhcccccccccccccc
Confidence 458 99999999999999864
No 5
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=280.17 Aligned_cols=190 Identities=33% Similarity=0.462 Sum_probs=159.9
Q ss_pred CCCccccCC-cccCCCccccCccccCCCCeEEEEecccCCCCcceeeEeeeccCCCCcceEEEEEeCCCCCchHHHHHHH
Q 024625 62 RGPIVDVLP-EKEDDGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKE 140 (265)
Q Consensus 62 ~~~~~~~~~-~~~~~~g~~~g~~~~~~~~~~~g~~s~~G~R~~~ED~~~v~~~~~~~~~~~lf~VfDGHGG~~aa~~a~~ 140 (265)
||++|++|. +|....|+. +-+.||.++|||||..|||+|-+...+. .++++|+|||||||.++|.|++.
T Consensus 1 MGAYLs~P~t~K~s~dg~g--------~lL~yg~s~MQGWRvsqEDAHNci~~ld--~~t~mF~VYDGHGG~EVa~yca~ 70 (542)
T KOG0699|consen 1 MGAYLSKPITEKESEDGSG--------NLLSYGCSTMQGWRVSQEDAHNCIVDLD--TDTHMFGVYDGHGGTEVAKYCAA 70 (542)
T ss_pred CcccccCCccccccccccC--------ccchhchhhhhccccchhhhhccccccc--CcceEEEEecCCCcHHHHHHHHH
Confidence 788898884 554444431 3489999999999999999998877653 46799999999999999999999
Q ss_pred HHHHHHHcCCCCc-ccHHHHHHHHHHHHHHHHHHh----------h--cCCC----------------------------
Q 024625 141 HLFENLLKHPQFM-TDTKLAISETYQQTDVDFLES----------E--RDTY---------------------------- 179 (265)
Q Consensus 141 ~l~~~l~~~~~~~-~~~~~~l~~af~~~d~~i~~~----------~--~~~~---------------------------- 179 (265)
.|+.+|++...+. .+...+|.+||..+|..|... . ....
T Consensus 71 kLPdflK~~k~yk~g~~~~aL~~AFl~fD~~l~~ee~~keLk~iag~~~~k~~~aeaDd~deed~a~l~EEa~~pl~ElL 150 (542)
T KOG0699|consen 71 KLPDFLKERKFYKAGDVAEALQKAFLDFDDFLRAEESMKELKDIAGEGKPKKAGAEADDEDEEDRADLIEEASVPLAELL 150 (542)
T ss_pred hhhHHHHhHHhhhcccHHHHHHHHHhchhhhhcCHHHHHHHHHHcCCCCcccccccccccchHHHHHHHHhccCcHHHHH
Confidence 9999998765443 366778888888777654321 0 0000
Q ss_pred --------------------------------------------------------------------------------
Q 024625 180 -------------------------------------------------------------------------------- 179 (265)
Q Consensus 180 -------------------------------------------------------------------------------- 179 (265)
T Consensus 151 ~rY~G~~~hK~~~sp~~~~g~~s~e~~~~~~~~~eA~p~dst~~~ps~~~~p~A~A~~~~~s~~d~~te~g~~k~~g~~~ 230 (542)
T KOG0699|consen 151 KRYGGAGVHKSLLSPFLAKGDVSDESEDEDEDEEEAEPQDSTEREPSENEDPMASAEVVIESAEDKETEEGSPKKKGQKR 230 (542)
T ss_pred HHhcCCCccccccChhhhccCCccCCCcccccccccCCCCccccCcccccCCcccceeccccccccccccCCCCCCCccc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 024625 180 -------------------------------------------------------------------------------- 179 (265)
Q Consensus 180 -------------------------------------------------------------------------------- 179 (265)
T Consensus 231 g~~g~~~~S~s~Kl~q~sKsef~fE~~~sS~d~~D~a~~EEeD~~k~~d~sd~~sse~~eneed~Ded~e~e~ddEE~~e 310 (542)
T KOG0699|consen 231 GQKGHPIQSESKKLNQSSKSEFDFETAPSSSDGVDGAATEEEDEVKSPDDSDAESSEFVENEEDDDEDAEDEQDDEEMVE 310 (542)
T ss_pred ccCCCcchhhhhhcccccccccccccCCCcccccccccccccccccCCcccccccchhcccccccccccccccchhhhhh
Confidence
Q ss_pred -----------------CCCCceEEEEEEECCEEEEEEECcCceEEEeCCeEEecCCCCCCCCHHHHHHHHHcCCEEEeC
Q 024625 180 -----------------RDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWA 242 (265)
Q Consensus 180 -----------------~~~GsTa~~~li~~~~l~vAnvGDSRa~l~r~g~~~~LT~DH~p~~~~E~~RI~~aGG~v~~~ 242 (265)
..+||||+||+|.+++|||||.||||+|++|+|+++-||.||+|.++.|..||.+|||.|...
T Consensus 311 ~~map~~~~~~g~EePG~DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlD 390 (542)
T KOG0699|consen 311 GSMAPLLLGSGGAEEPGEDSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLD 390 (542)
T ss_pred hcccccccccccCcCCCCCCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeec
Confidence 357999999999999999999999999999999999999999999999999999999999988
Q ss_pred CcccccCCccccccccCCcccC
Q 024625 243 GKITNTSPLLLMQRNFKLPVYL 264 (265)
Q Consensus 243 g~~R~v~G~LavSRa~GD~~l~ 264 (265)
| | |||.|.+||||||+.|.
T Consensus 391 G--R-VNGGLNLSRA~GDHaYK 409 (542)
T KOG0699|consen 391 G--R-VNGGLNLSRAFGDHAYK 409 (542)
T ss_pred c--e-ecCccchhhhhhhhhhh
Confidence 8 8 99999999999999874
No 6
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=4.1e-34 Score=266.73 Aligned_cols=163 Identities=34% Similarity=0.527 Sum_probs=140.3
Q ss_pred CCCeEEEEecccCCCCcceeeEeeeccCCCCcceEEEEEeCCCCCchHHHHHHHHHHHHHHcCCCCcccHHHHHHHHHHH
Q 024625 87 DGKLRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQ 166 (265)
Q Consensus 87 ~~~~~~g~~s~~G~R~~~ED~~~v~~~~~~~~~~~lf~VfDGHGG~~aa~~a~~~l~~~l~~~~~~~~~~~~~l~~af~~ 166 (265)
+..+.+|+.+++|+|++|||++.+... .+..||+|||||||.++|+|++++|.+.+.+.... ...+.|+++|..
T Consensus 19 ~~~~~~g~~s~~G~R~~nED~~~v~~~----~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~--~~~~~l~~a~~~ 92 (381)
T PTZ00224 19 NSIFRCASACVNGYRESMEDAHLLYLT----DDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEP--MTDERMEELCLE 92 (381)
T ss_pred CccEEEEEEeCCCCCCCCCCeeEeccC----CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhcccc--ccHHHHHHHHHH
Confidence 467999999999999999999876542 23469999999999999999999999888654322 224568999999
Q ss_pred HHHHHHHhhcCCCCCCCceEEEEEEE-CCEEEEEEECcCceEEEeCCeEEecCCCCCCCCHHHHHHHHHcCCEEEeCCcc
Q 024625 167 TDVDFLESERDTYRDDGSTASTAILV-GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGKI 245 (265)
Q Consensus 167 ~d~~i~~~~~~~~~~~GsTa~~~li~-~~~l~vAnvGDSRa~l~r~g~~~~LT~DH~p~~~~E~~RI~~aGG~v~~~g~~ 245 (265)
+|+++.+... .+|||+++++|. +.++|||||||||+|++++|++++||+||+|.++.|++||.++||.+..+
T Consensus 93 ~d~~i~~~~~----~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~--- 165 (381)
T PTZ00224 93 IDEEWMDSGR----EGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACGGRVVSN--- 165 (381)
T ss_pred HHHHHHhccc----CCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHccCEeccc---
Confidence 9999985432 469999998886 57999999999999999999999999999999999999999999999754
Q ss_pred cccCCccccccccCCccc
Q 024625 246 TNTSPLLLMQRNFKLPVY 263 (265)
Q Consensus 246 R~v~G~LavSRa~GD~~l 263 (265)
| ++|.+++||+|||..|
T Consensus 166 R-v~G~l~vTRalGd~~~ 182 (381)
T PTZ00224 166 R-VDGDLAVSRAFGDRSF 182 (381)
T ss_pred c-ccCceeeecccCCccc
Confidence 8 9999999999999754
No 7
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=99.97 E-value=4.7e-31 Score=241.50 Aligned_cols=159 Identities=31% Similarity=0.476 Sum_probs=130.5
Q ss_pred cceeeEeeeccCCCCcceEEEEEeCCCCCchHHHHHHHHHHHHHHcCC-------------C------------------
Q 024625 103 TMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHP-------------Q------------------ 151 (265)
Q Consensus 103 ~~ED~~~v~~~~~~~~~~~lf~VfDGHGG~~aa~~a~~~l~~~l~~~~-------------~------------------ 151 (265)
.-||.+.+... .+.++.|+||||||||.++++|++++|..++..++ +
T Consensus 84 ~~edrv~~~~s--~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~ 161 (390)
T KOG0700|consen 84 AEEDRVSVAVS--EENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSS 161 (390)
T ss_pred cccCcceeeee--ccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccc
Confidence 34555544332 24678999999999999999999999999887221 0
Q ss_pred ---CcccHHHHHHHHHHHHHHHHHHh------hcCCCCCCCceEEEEEEECCEEEEEEECcCceEEEeC---C---eEEe
Q 024625 152 ---FMTDTKLAISETYQQTDVDFLES------ERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKA---G---KAIP 216 (265)
Q Consensus 152 ---~~~~~~~~l~~af~~~d~~i~~~------~~~~~~~~GsTa~~~li~~~~l~vAnvGDSRa~l~r~---g---~~~~ 216 (265)
....+.++|.+||.+++++|.+. ..+....+|||+++.+|.+..+||||+|||||||.+. + .++|
T Consensus 162 ~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~q 241 (390)
T KOG0700|consen 162 ADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQ 241 (390)
T ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEe
Confidence 03467889999999999999763 2344567999999999999999999999999999752 2 6899
Q ss_pred cCCCCCCCCHHHHHHHHHcCC---EEEeCCcccccCCccccccccCCcccC
Q 024625 217 LSEDHKPNRCDERKRIENAGG---VVMWAGKITNTSPLLLMQRNFKLPVYL 264 (265)
Q Consensus 217 LT~DH~p~~~~E~~RI~~aGG---~v~~~g~~R~v~G~LavSRa~GD~~l~ 264 (265)
||.||+.++++|++||+..+. .+..++.|| |.|.|.|||||||.+|+
T Consensus 242 LS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~R-vkG~L~vsRAfGd~~lK 291 (390)
T KOG0700|consen 242 LSTDHNASNEDEVRRIRSEHPDDPHIVVNKHWR-VKGILQVSRAFGDGYLK 291 (390)
T ss_pred cChhhccccHHHHHHHHHhCCCCcceEeeccce-eeEEEEeeeeccceeec
Confidence 999999999999999999995 444455599 99999999999999985
No 8
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=6.3e-30 Score=228.44 Aligned_cols=167 Identities=26% Similarity=0.297 Sum_probs=139.7
Q ss_pred CeEEEEecccCC-CCcceeeEeeeccCCCCcceEEEEEeCCCCCchHHHHHHHHHHHHHHcCCCCc-----cc-HHHHHH
Q 024625 89 KLRCGYSSFRGK-RATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFM-----TD-TKLAIS 161 (265)
Q Consensus 89 ~~~~g~~s~~G~-R~~~ED~~~v~~~~~~~~~~~lf~VfDGHGG~~aa~~a~~~l~~~l~~~~~~~-----~~-~~~~l~ 161 (265)
.+.++..++.|. |.+|||++.+........ ..||+|||||||+.++++|++.+.+.|.+..... .+ .++.|.
T Consensus 7 ~~~~~~~s~~g~~R~~NeD~~~~~~~~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l~ 85 (262)
T COG0631 7 SLKVAGLSDVGTVRKHNEDAFLIKPNENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEELLK 85 (262)
T ss_pred eeeeeeeccCCCccCCCCcceeeccccCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHH
Confidence 356666666665 999999999887543334 6799999999999999999999999888753221 11 679999
Q ss_pred HHHHHHHHHHHHhhc--CCCCCCCceEEEEEEECCEEEEEEECcCceEEEeCCeEEecCCCCCCCCHHHHHHHHHcCCEE
Q 024625 162 ETYQQTDVDFLESER--DTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVV 239 (265)
Q Consensus 162 ~af~~~d~~i~~~~~--~~~~~~GsTa~~~li~~~~l~vAnvGDSRa~l~r~g~~~~LT~DH~p~~~~E~~RI~~aGG~v 239 (265)
+++..+|+.+..... .....+|||++++++.++++|+|||||||+|+++++++++||+||++.++.|+.|+...++.+
T Consensus 86 ~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~~~~~~~~~~ 165 (262)
T COG0631 86 EAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQRGIITPEEAR 165 (262)
T ss_pred HHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHHHhcCCCHHHHH
Confidence 999999999987643 455789999999999999999999999999999999999999999999999999988887766
Q ss_pred EeCCcccccCCccccccccCCccc
Q 024625 240 MWAGKITNTSPLLLMQRNFKLPVY 263 (265)
Q Consensus 240 ~~~g~~R~v~G~LavSRa~GD~~l 263 (265)
... | .+ ++||+|||..+
T Consensus 166 ~~~---~-~~---~ltralG~~~~ 182 (262)
T COG0631 166 SHP---R-RN---ALTRALGDFDL 182 (262)
T ss_pred hCc---c-ch---hhhhhcCCCcc
Confidence 543 4 43 99999999874
No 9
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.94 E-value=7.6e-26 Score=197.92 Aligned_cols=167 Identities=38% Similarity=0.557 Sum_probs=142.4
Q ss_pred EEEEecccCCCCcceeeEeeeccCCCCcceEEEEEeCCCCCchHHHHHHHHHHHHHHcCCCC-----cccHHHHHHHHHH
Q 024625 91 RCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQF-----MTDTKLAISETYQ 165 (265)
Q Consensus 91 ~~g~~s~~G~R~~~ED~~~v~~~~~~~~~~~lf~VfDGHGG~~aa~~a~~~l~~~l~~~~~~-----~~~~~~~l~~af~ 165 (265)
.++.++..|+|+.|||++.+...... .+..+|+|+|||||...++++++.+.+.+.+.... ...+...|+.+|+
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~~-~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~ 80 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLNN-EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFL 80 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCCC-CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 57788899999999999988764321 24689999999999999999999999988775533 2466788999999
Q ss_pred HHHHHHHHhhc--CCCCCCCceEEEEEEECCEEEEEEECcCceEEEeCCeEEecCCCCCCCCHHHHHHHHHcCCEEEeCC
Q 024625 166 QTDVDFLESER--DTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAG 243 (265)
Q Consensus 166 ~~d~~i~~~~~--~~~~~~GsTa~~~li~~~~l~vAnvGDSRa~l~r~g~~~~LT~DH~p~~~~E~~RI~~aGG~v~~~g 243 (265)
.+++.+..... .....+|||++++++.+++++++|+||||+|++++++++++|.||++.++.|+.||...+|.+...
T Consensus 81 ~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~~- 159 (254)
T cd00143 81 RADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVSNG- 159 (254)
T ss_pred HHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEEeC-
Confidence 99999886543 345678999999999999999999999999999999999999999999999999999999987522
Q ss_pred cccccCCccccccccCCcc
Q 024625 244 KITNTSPLLLMQRNFKLPV 262 (265)
Q Consensus 244 ~~R~v~G~LavSRa~GD~~ 262 (265)
+ .++...+||+||+..
T Consensus 160 --~-~~~~~~~t~~lG~~~ 175 (254)
T cd00143 160 --R-VPGVLAVTRALGDFD 175 (254)
T ss_pred --E-EcCceeeccccCCcc
Confidence 4 667789999999984
No 10
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.94 E-value=1.8e-25 Score=196.34 Aligned_cols=167 Identities=43% Similarity=0.621 Sum_probs=144.0
Q ss_pred eEEEEecccCCCCcceeeEeeeccCCCCcceEEEEEeCCCCCchHHHHHHHHHHHHHHcCCCCc----ccHHHHHHHHHH
Q 024625 90 LRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFM----TDTKLAISETYQ 165 (265)
Q Consensus 90 ~~~g~~s~~G~R~~~ED~~~v~~~~~~~~~~~lf~VfDGHGG~~aa~~a~~~l~~~l~~~~~~~----~~~~~~l~~af~ 165 (265)
+.++..+.+|.|..|||++.+.... ..+..+|+|||||||..+|+++++.+.+.+.+..... ..+...|.+++.
T Consensus 6 ~~~~~~~~~~~r~~neD~~~~~~~~--~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 83 (255)
T smart00332 6 LRYGLSSMQGVRKPMEDAHVITPDL--SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFL 83 (255)
T ss_pred eeEEEecCCCCCCCCcceEEEeccC--CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHH
Confidence 6788888999999999999887542 2456899999999999999999999999988764333 247888999999
Q ss_pred HHHHHHHHhhcC--CCCCCCceEEEEEEECCEEEEEEECcCceEEEeCCeEEecCCCCCCCCHHHHHHHHHcCCEEEeCC
Q 024625 166 QTDVDFLESERD--TYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAG 243 (265)
Q Consensus 166 ~~d~~i~~~~~~--~~~~~GsTa~~~li~~~~l~vAnvGDSRa~l~r~g~~~~LT~DH~p~~~~E~~RI~~aGG~v~~~g 243 (265)
.++..+...... ....+|||++++++.++++|++|+||||+|++++++..+||.||++.++.|+.||...++.+..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~~- 162 (255)
T smart00332 84 KTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVING- 162 (255)
T ss_pred HHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEECC-
Confidence 999998875432 23578999999999999999999999999999999999999999999999999999999988643
Q ss_pred cccccCCccccccccCCcc
Q 024625 244 KITNTSPLLLMQRNFKLPV 262 (265)
Q Consensus 244 ~~R~v~G~LavSRa~GD~~ 262 (265)
+ .++.+.+||++|+..
T Consensus 163 --~-~~~~~~lt~~~g~~~ 178 (255)
T smart00332 163 --R-VNGVLALSRAIGDFF 178 (255)
T ss_pred --e-ECCeEecccccCCHh
Confidence 5 777899999999865
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=99.92 E-value=9.6e-25 Score=214.67 Aligned_cols=165 Identities=22% Similarity=0.220 Sum_probs=118.0
Q ss_pred CeEEEEecccCC-CCcceeeEeeeccC-----CCC---cceEEEEEeCCCCCchHHHHHHHH----HHHHHHcCCCCccc
Q 024625 89 KLRCGYSSFRGK-RATMEDFYDIKTSN-----VDG---QAVCMFGVFDGHGGSRAAEYLKEH----LFENLLKHPQFMTD 155 (265)
Q Consensus 89 ~~~~g~~s~~G~-R~~~ED~~~v~~~~-----~~~---~~~~lf~VfDGHGG~~aa~~a~~~----l~~~l~~~~~~~~~ 155 (265)
.+.++..+++|. |++|||++.+.... ..+ ....+|+|||||||+.+++.|++. |.+++.+.......
T Consensus 374 ~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~~ 453 (645)
T PRK14559 374 SLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDELP 453 (645)
T ss_pred eEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhccccc
Confidence 478899999997 99999998765321 111 134699999999999876666554 44444433221123
Q ss_pred HHHHHHHHHHHHHHHHHHhhc----CCCCCCCceEEEEEEECCEEEEEEECcCceEEE-eCCeEEecCCCCCCCCHHHHH
Q 024625 156 TKLAISETYQQTDVDFLESER----DTYRDDGSTASTAILVGNHLYVANVGDSRTVIS-KAGKAIPLSEDHKPNRCDERK 230 (265)
Q Consensus 156 ~~~~l~~af~~~d~~i~~~~~----~~~~~~GsTa~~~li~~~~l~vAnvGDSRa~l~-r~g~~~~LT~DH~p~~~~E~~ 230 (265)
.++.|+++|..+|..|.+... .....+|||+++++|.++++|++||||||+|++ ++|++++||+||++...
T Consensus 454 ~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~---- 529 (645)
T PRK14559 454 DEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQR---- 529 (645)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHH----
Confidence 467799999999999976421 134569999999999999999999999999987 57899999999998743
Q ss_pred HHHHcCCEEE-eCCcccccCCccccccccCCcc
Q 024625 231 RIENAGGVVM-WAGKITNTSPLLLMQRNFKLPV 262 (265)
Q Consensus 231 RI~~aGG~v~-~~g~~R~v~G~LavSRa~GD~~ 262 (265)
+.+.| +. .....| .+..++||+||+..
T Consensus 530 -lv~~G--i~~~~a~~~--p~~~~LTrALG~~~ 557 (645)
T PRK14559 530 -EIQRG--VEPQIAYAR--PDAYQLTQALGPRD 557 (645)
T ss_pred -HHHhC--CCHHHHhcC--cccceeeeccCCCC
Confidence 33334 21 011112 23478999999853
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.81 E-value=1.6e-19 Score=161.75 Aligned_cols=118 Identities=28% Similarity=0.427 Sum_probs=97.8
Q ss_pred CcceEEEEEeCCCCCchHHHHHHHHHHHHHHcCCC----------------C----------------c--------ccH
Q 024625 117 GQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQ----------------F----------------M--------TDT 156 (265)
Q Consensus 117 ~~~~~lf~VfDGHGG~~aa~~a~~~l~~~l~~~~~----------------~----------------~--------~~~ 156 (265)
+.++++|.+||||.|+.+|-.|+..++..+.+... + . .-+
T Consensus 141 ~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LV 220 (493)
T KOG1323|consen 141 RADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLV 220 (493)
T ss_pred CCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhh
Confidence 34689999999999999998888777665554310 0 0 014
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEEECCEEEEEEECcCceEEEeCCeEEecCCCCCCCCHHHHHHHHHcC
Q 024625 157 KLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAG 236 (265)
Q Consensus 157 ~~~l~~af~~~d~~i~~~~~~~~~~~GsTa~~~li~~~~l~vAnvGDSRa~l~r~g~~~~LT~DH~p~~~~E~~RI~~aG 236 (265)
.-+|..||+.+|++|......-...+|||+++++..-+++|+||.|||||+|++++++.+||++.+|. .||+||+..+
T Consensus 221 iGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPe--tERqRlQ~La 298 (493)
T KOG1323|consen 221 IGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPE--TERQRLQELA 298 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcH--HHHHHHHHHh
Confidence 46899999999999987655555678999999999999999999999999999999999999999997 8999998854
No 13
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.55 E-value=5.2e-14 Score=120.92 Aligned_cols=125 Identities=26% Similarity=0.332 Sum_probs=74.1
Q ss_pred ecccCCCCcceeeEeeeccCCCCcceEEEEEeCCCCCchHHHH----HHHHHHHHHHcCCCCccc--HHHHHHHHHHHHH
Q 024625 95 SSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEY----LKEHLFENLLKHPQFMTD--TKLAISETYQQTD 168 (265)
Q Consensus 95 ~s~~G~R~~~ED~~~v~~~~~~~~~~~lf~VfDGHGG~~aa~~----a~~~l~~~l~~~~~~~~~--~~~~l~~af~~~d 168 (265)
.+++|.++.|||++.+... .+..+++|+||+||...++. +.+.+.+.+.+....... .+..++.+..++.
T Consensus 3 ~sh~~~~~~nqD~~~~~~~----~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD----DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEIL 78 (212)
T ss_dssp ----TTSSS--EEEEEE-T----CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeC----CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH
Confidence 4678999999999986654 22356799999997766655 444555555555543321 2233333333333
Q ss_pred HHH-----HHhhcCCCCCCCceEEEEEEECCEEEEEEECcCceE-EEeCCeEEecCCCCCC
Q 024625 169 VDF-----LESERDTYRDDGSTASTAILVGNHLYVANVGDSRTV-ISKAGKAIPLSEDHKP 223 (265)
Q Consensus 169 ~~i-----~~~~~~~~~~~GsTa~~~li~~~~l~vAnvGDSRa~-l~r~g~~~~LT~DH~p 223 (265)
..+ ...........+||++++++.++.++++|+||||+| +.++++...+|.||+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~ 139 (212)
T PF13672_consen 79 SIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSG 139 (212)
T ss_dssp HHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BH
T ss_pred HHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccc
Confidence 222 111233456789999999999999999999999996 5689999999999973
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.39 E-value=4.5e-13 Score=133.80 Aligned_cols=167 Identities=19% Similarity=0.252 Sum_probs=137.4
Q ss_pred eEEEEecccCCCCcceeeEeeeccCCCCcceEEEEEeCCCCCchHHHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHH
Q 024625 90 LRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDV 169 (265)
Q Consensus 90 ~~~g~~s~~G~R~~~ED~~~v~~~~~~~~~~~lf~VfDGHGG~~aa~~a~~~l~~~l~~~~~~~~~~~~~l~~af~~~d~ 169 (265)
++||++.+.|.|..+--+.....++..+. -+.|+.+||-+-.+...+++..+..++.++.+...+-.+.++.+|..+++
T Consensus 522 ~t~Gv~~~~gqrnk~c~~~~~v~nf~~~~-~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et~~mr~~fl~~~r 600 (1081)
T KOG0618|consen 522 WTYGVAGVSGQRNKVCSRAVWVENFFLNP-QATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNETEQMRNTFLRLNR 600 (1081)
T ss_pred eeeccchhcccccchhhhhhhhhhcccCC-cceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHhh
Confidence 57999999999988776655544444433 47999999999999999999999999998877666666669999999999
Q ss_pred HHHHhhcCCCCCCCceEEEEEEEC--------CEEEEEEECcCceEEEeCCeEEecCCCC-CCCCHHHHHHHHHcCCEEE
Q 024625 170 DFLESERDTYRDDGSTASTAILVG--------NHLYVANVGDSRTVISKAGKAIPLSEDH-KPNRCDERKRIENAGGVVM 240 (265)
Q Consensus 170 ~i~~~~~~~~~~~GsTa~~~li~~--------~~l~vAnvGDSRa~l~r~g~~~~LT~DH-~p~~~~E~~RI~~aGG~v~ 240 (265)
++-+... .-|..++.+.|.. .++.+||+|+|.++++++|+.+++|+-. ...+++|.+||..++|+|.
T Consensus 601 klg~~g~----~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i~ 676 (1081)
T KOG0618|consen 601 KLGEEGQ----VLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGFIT 676 (1081)
T ss_pred hhhhhhc----cccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHHHHHHhcCeec
Confidence 9865433 3466666666664 3688999999999999999999998776 4459999999999999998
Q ss_pred eCCcccccCCccccccccCCcccC
Q 024625 241 WAGKITNTSPLLLMQRNFKLPVYL 264 (265)
Q Consensus 241 ~~g~~R~v~G~LavSRa~GD~~l~ 264 (265)
.++ + ++|+...||++|-++++
T Consensus 677 ed~--k-~ngvt~~tR~iG~~~l~ 697 (1081)
T KOG0618|consen 677 EDN--K-LNGVTSSTRAIGPFSLF 697 (1081)
T ss_pred CCC--e-eeceeeeeeeccccccc
Confidence 655 6 99999999999988764
No 15
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.11 E-value=9.7e-10 Score=92.95 Aligned_cols=111 Identities=19% Similarity=0.146 Sum_probs=80.6
Q ss_pred CcceeeEeeeccCCCCcceEEEEEeCCCCCchHHHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 024625 102 ATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRD 181 (265)
Q Consensus 102 ~~~ED~~~v~~~~~~~~~~~lf~VfDGHGG~~aa~~a~~~l~~~l~~~~~~~~~~~~~l~~af~~~d~~i~~~~~~~~~~ 181 (265)
...-|.+.+.... .+..+|+|+||||+...|.+++..+...+.+...... .+.+.+..+|+.+... ....
T Consensus 15 ~~~GD~~~~~~~~---~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~----~~~~~l~~~n~~l~~~---~~~~ 84 (193)
T smart00331 15 QVGGDFYDVVKLP---EGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGI----SLSQILERLNRAIYEN---GEDG 84 (193)
T ss_pred hcCccEEEEEEeC---CCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCC----CHHHHHHHHHHHHHhc---CCCC
Confidence 4456777665542 2358999999999888888888888887765443322 2455666777777654 2345
Q ss_pred CCceEEEEEE--ECCEEEEEEECcCceEEEe-CCeEEecCCCCC
Q 024625 182 DGSTASTAIL--VGNHLYVANVGDSRTVISK-AGKAIPLSEDHK 222 (265)
Q Consensus 182 ~GsTa~~~li--~~~~l~vAnvGDSRa~l~r-~g~~~~LT~DH~ 222 (265)
+|+|++++++ ..++++++|+||+|+++++ ++...+++.+..
T Consensus 85 ~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~~ 128 (193)
T smart00331 85 MFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDLG 128 (193)
T ss_pred cEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCCC
Confidence 7999999998 4689999999999999998 666666665543
No 16
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.06 E-value=1.8e-09 Score=97.04 Aligned_cols=109 Identities=24% Similarity=0.309 Sum_probs=79.3
Q ss_pred cceeeEeeeccCCCCcceEEEEEeCCCCCc-----hHHHHHHHHHH--HHHHcCC-CCcccHHHHHHHHHHHHHHHHHHh
Q 024625 103 TMEDFYDIKTSNVDGQAVCMFGVFDGHGGS-----RAAEYLKEHLF--ENLLKHP-QFMTDTKLAISETYQQTDVDFLES 174 (265)
Q Consensus 103 ~~ED~~~v~~~~~~~~~~~lf~VfDGHGG~-----~aa~~a~~~l~--~~l~~~~-~~~~~~~~~l~~af~~~d~~i~~~ 174 (265)
.-||++++..+ ....+.||+||.||. ..+.|..+.+- +.+.+.. ....++...|..+|.++-+
T Consensus 90 ~GEDa~Fvss~----~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~----- 160 (330)
T KOG1379|consen 90 GGEDAWFVSSN----PHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAELKS----- 160 (330)
T ss_pred CCCcceeeccC----cccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHhh-----
Confidence 56899999875 234699999999964 55666655442 2222333 3335888888888876632
Q ss_pred hcCCCCCCCceEEEEEEE--CCEEEEEEECcCceEEEeCCeEEecCCCC
Q 024625 175 ERDTYRDDGSTASTAILV--GNHLYVANVGDSRTVISKAGKAIPLSEDH 221 (265)
Q Consensus 175 ~~~~~~~~GsTa~~~li~--~~~l~vAnvGDSRa~l~r~g~~~~LT~DH 221 (265)
......++|||+++.+. +++||+||+|||-..++|+|++++-|...
T Consensus 161 -~~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q 208 (330)
T KOG1379|consen 161 -QKVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQ 208 (330)
T ss_pred -cCCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchh
Confidence 12334578999999998 89999999999999999999887766553
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=97.92 E-value=0.00013 Score=74.46 Aligned_cols=117 Identities=14% Similarity=0.097 Sum_probs=79.8
Q ss_pred cCCCCcceeeEeeeccCCCCcceEEEEEeCCCCCchHHHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHHHHHHhhcC
Q 024625 98 RGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERD 177 (265)
Q Consensus 98 ~G~R~~~ED~~~v~~~~~~~~~~~lf~VfDGHGG~~aa~~a~~~l~~~l~~~~~~~~~~~~~l~~af~~~d~~i~~~~~~ 177 (265)
++.+..+.|.+.+.... ++..+++|+||+|....|..++..+.+.+.+......++ ..++..+|..+....
T Consensus 561 k~g~~vsGD~y~~~~l~---~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~~----~~ai~~lN~~L~~~~-- 631 (764)
T TIGR02865 561 KDGELVSGDSYSFGKLS---AGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFDR----EVAIKTVNSILSLRS-- 631 (764)
T ss_pred CCCCcccCceEEEEEEC---CCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCCH----HHHHHHHHHHHHhCC--
Confidence 34467889998776532 234789999999955555555555544443322111122 456677777765432
Q ss_pred CCCCCCceEEEEEEE--CCEEEEEEECcCceEEEeCCeEEecCCCCCCC
Q 024625 178 TYRDDGSTASTAILV--GNHLYVANVGDSRTVISKAGKAIPLSEDHKPN 224 (265)
Q Consensus 178 ~~~~~GsTa~~~li~--~~~l~vAnvGDSRa~l~r~g~~~~LT~DH~p~ 224 (265)
...+.+|+.+++++ .+++.++|+|+++.|+.+++++.+++..+-|-
T Consensus 632 -~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lPl 679 (764)
T TIGR02865 632 -TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLPI 679 (764)
T ss_pred -CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCcee
Confidence 23468999999886 58899999999999999999999888776653
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=97.50 E-value=0.002 Score=53.89 Aligned_cols=99 Identities=18% Similarity=0.140 Sum_probs=61.5
Q ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHHcCCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEEE--CCEE
Q 024625 119 AVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILV--GNHL 196 (265)
Q Consensus 119 ~~~lf~VfDGHGG~~aa~~a~~~l~~~l~~~~~~~~~~~~~l~~af~~~d~~i~~~~~~~~~~~GsTa~~~li~--~~~l 196 (265)
+..++.|.|+.|---.|.+.+..+...+........+ ..+.+..+|+.+....... ...+|++++.+. .+++
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~----p~~~l~~ln~~l~~~~~~~--~~~~t~~~~~~d~~~~~l 76 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD----PEELLEALNRRLYRDLKGD--NRYATACYAIIDPETGTL 76 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS----HHHHHHHHHHHHHHHTTTT--STTEEEEEEEEETTTTEE
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHhhhc--cccceEEEEEecccceEE
Confidence 3478999999994333333333333333322211112 3445666777764433221 468888888877 4689
Q ss_pred EEEEECcCceEEEeC--CeEEecCCCCCC
Q 024625 197 YVANVGDSRTVISKA--GKAIPLSEDHKP 223 (265)
Q Consensus 197 ~vAnvGDSRa~l~r~--g~~~~LT~DH~p 223 (265)
+++|+|++.++++++ +....+.....|
T Consensus 77 ~~~~aG~~~~l~~~~~~~~~~~~~~~~~~ 105 (193)
T PF07228_consen 77 TYANAGHPPPLLLRPGGREIEQLESEGPP 105 (193)
T ss_dssp EEEEESSSEEEEEETTCTEEEEETCSSBB
T ss_pred EEeCCCCCCEEEEeccccceeecccCccc
Confidence 999999999999998 556666555444
No 19
>PRK10693 response regulator of RpoS; Provisional
Probab=73.22 E-value=43 Score=30.26 Aligned_cols=50 Identities=8% Similarity=0.016 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCceEEEEEEEC--CEEEEEEECcCceEEEeCCeE
Q 024625 161 SETYQQTDVDFLESERDTYRDDGSTASTAILVG--NHLYVANVGDSRTVISKAGKA 214 (265)
Q Consensus 161 ~~af~~~d~~i~~~~~~~~~~~GsTa~~~li~~--~~l~vAnvGDSRa~l~r~g~~ 214 (265)
.+.+..+|+.+.+..... --|++.++++. +++..+|.|-...++..+++.
T Consensus 208 ~~~l~~lN~~l~~~~~~~----~~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 208 GALLKQVNHLLRQANLPG----QFPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred HHHHHHHHHHHHhcCCCc----eeeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 445567888777653222 25888888874 579999999999886555544
No 20
>COG1659 Uncharacterized protein, linocin/CFP29 homolog [Function unknown]
Probab=28.31 E-value=65 Score=28.21 Aligned_cols=36 Identities=14% Similarity=0.183 Sum_probs=29.6
Q ss_pred HHHHHHHH-cCCEEEeCCcccccCCccccccccCCcccCC
Q 024625 227 DERKRIEN-AGGVVMWAGKITNTSPLLLMQRNFKLPVYLL 265 (265)
Q Consensus 227 ~E~~RI~~-aGG~v~~~g~~R~v~G~LavSRa~GD~~l~~ 265 (265)
-|+++|.+ -+|.|.+- ++ +++.|-||-.=||+.|-|
T Consensus 192 p~~e~i~~~v~g~ii~T--P~-I~~aLvVS~rggdFdL~l 228 (267)
T COG1659 192 PIREHLNRLVDGDIIWT--PA-IDGALVVSTRGGDFDLQL 228 (267)
T ss_pred cHHHHHHHhhCCceEec--cc-cCceEEEeccCCCeeeee
Confidence 36778888 78888875 47 999999999999998854
No 21
>COG3342 Uncharacterized conserved protein [Function unknown]
Probab=20.07 E-value=3.4e+02 Score=24.33 Aligned_cols=22 Identities=23% Similarity=0.256 Sum_probs=18.9
Q ss_pred eEEecCCCCCCCCHHHHHHHHH
Q 024625 213 KAIPLSEDHKPNRCDERKRIEN 234 (265)
Q Consensus 213 ~~~~LT~DH~p~~~~E~~RI~~ 234 (265)
+.+-|+.|++|+.-.|++|+..
T Consensus 180 ~~vDlRVDd~~dPi~eLeRl~~ 201 (265)
T COG3342 180 YYVDLRVDDHPDPIPELERLFV 201 (265)
T ss_pred eeEeeEeecCCCchHHHHHHHH
Confidence 5788999999998899998865
Done!