Query 024628
Match_columns 265
No_of_seqs 189 out of 878
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 11:36:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024628.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024628hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3w3e_A Cotyledoneous yieldin-l 100.0 9.3E-90 3.2E-94 612.7 20.7 240 23-265 2-241 (242)
2 3cql_A Endochitinase; glycosyl 100.0 6.1E-88 2.1E-92 603.8 21.0 242 23-265 1-242 (243)
3 2z37_A Chitinase; family 19, c 100.0 1.5E-87 5.1E-92 601.9 20.4 243 23-265 1-243 (244)
4 1dxj_A Class II chitinase; hyd 100.0 4.2E-86 1.5E-90 591.9 20.7 240 23-265 1-240 (242)
5 2dkv_A Chitinase; whole struct 100.0 2.4E-83 8.2E-88 591.0 20.9 244 21-265 55-298 (309)
6 3hbe_X Class IV chitinase CHIA 100.0 1.8E-73 6E-78 497.8 17.6 204 23-259 1-204 (204)
7 2cjl_A Chitinase G, secreted c 100.0 1E-65 3.6E-70 450.7 17.2 200 26-259 1-204 (204)
8 1wvv_A Chitinase C; family 19 100.0 3.4E-64 1.2E-68 456.6 15.6 205 21-259 57-265 (265)
9 1h8b_A ACT-EF34, alpha-actinin 28.2 74 0.0025 22.2 4.2 36 26-61 33-70 (75)
10 5pal_A Parvalbumin; calcium-bi 22.6 81 0.0028 22.1 3.7 33 24-61 2-34 (109)
No 1
>3w3e_A Cotyledoneous yieldin-like protein; alpha helical protein, hydrolase, family 19 glycosidase, REG protein of the cell WALL yield threshold; 1.50A {Vigna unguiculata} PDB: 1dxj_A
Probab=100.00 E-value=9.3e-90 Score=612.69 Aligned_cols=240 Identities=54% Similarity=1.043 Sum_probs=235.5
Q ss_pred ccccccCHHHHHHHhccCCCCCCCCCCccCHHHHHHHHhcCcccccCCCchhhhHHHHHHhhhcccccCCCccCCCCCCC
Q 024628 23 LISNLVSKELFAAIFLHKDDNACPAKGFYTYDSFIQATSCFPRFGNVGSLATRKREIAAFLAQISHETTGGWATAPDGPF 102 (265)
Q Consensus 23 ~v~~~it~~~f~~ifp~r~~~~~~~~~~yty~~fi~A~~~~~~f~~~g~~~~~~re~A~FLAq~~hET~~g~~~~~~~~~ 102 (265)
+|++|||+++|++|||||+++.||+++||||++||+|+++||+|+++|+.+++||||||||||++|||+|||.++++++|
T Consensus 2 ~v~~ivt~~~f~~~~~~rn~~~c~~~~fYty~~fi~Aa~~fp~F~~tg~~~~~krElAaFlA~~~hET~gg~~~a~~g~~ 81 (242)
T 3w3e_A 2 EVGSVIGASLFDQLLKHRNDQACEGKGFYSYNAFITAARSFAAFGTTGDSNTRKREVAAFLAQTSHETTGGAATSPDGPY 81 (242)
T ss_dssp CGGGTSCHHHHHHHTTTTTSTTSSCTTCSCHHHHHHHHHTSTTTTCSSSHHHHHHHHHHHHHHHHHHTCCCCTTSTTCGG
T ss_pred chHhhCCHHHHHHHhhccCCCCCCCCCcccHHHHHHHHHhhhhhcCCCCchhhHHHHHHHHhhcccccCCCcccCCCCcc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred ccCcceecccCCCCCCCCCCCCCCCCCCCCCcccCCCccccchhhHHHHHHHhCCCCCCChhHhhcChHHHHHHHHHHHH
Q 024628 103 AWGLCFKEEVTPQSDYCDSSNRKWPCYPGKSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVANNSLIAFKTALWFWM 182 (265)
Q Consensus 103 ~w~~~~~~E~~~~~~yc~~~n~~~~~~dG~~Y~GRG~iQLT~~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sA~wfW~ 182 (265)
+|+|||+||+++...||+ .+|||+||++|||||+||||||+||++++++++.|||+|||+|++||.+|+++|+||||
T Consensus 82 ~wg~~~~~E~~~~~~YC~---~~~Pc~dG~~Y~GRG~IQLTg~~NY~~~g~~lg~Dll~nPdlva~dp~~a~~sA~wfW~ 158 (242)
T 3w3e_A 82 AWGYCFVTERDKSNRYCD---GSGPCSAGKSYYGRGPIQLTHNYNYNAAGRALGVDLINNPDLVARDAVVSFKTALWFWM 158 (242)
T ss_dssp GCTTCCSBCSCCSCCCCC---SSSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHHHH
T ss_pred ceEEEEeecccCcccccc---cCCCCCCCCceecCCcccCCcHHHHHHHHHHhCCccccCHHHHhhCHHHHHHHHHhhhe
Confidence 999999999998889998 68999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCccccccccccCChhhhhhccCCCccchhhhhcCCccCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCCCCC
Q 024628 183 TEQKPKPSCHNVMIGKYVPTKADLAANRTVGFGLVTNIINGGLECGIPNDGRVNDRIGYFRRYAKLLNVDTGNNLDCENQ 262 (265)
Q Consensus 183 ~~~~~~ps~h~~~~g~w~p~~~D~~~~~~~~f~~~t~iINGg~ec~~~~~~~~~~R~~~y~~~~~~Lgv~~g~~l~c~~~ 262 (265)
+++.+|||||+||+|+|+|+.+|.++++.++|+.||+|||||+||++++.+++++|+++|+++|++|||+||+||+|.+|
T Consensus 159 t~~~~kps~h~vi~g~w~p~~aD~~agr~~gfg~tt~iINGGlECg~~~~~~~~dRi~~Y~r~~~~Lgv~~G~nl~C~~q 238 (242)
T 3w3e_A 159 TPQGNKPSCHDVITNRWTPSAADKAANRVPGFGVITNIINGGLECGKGPTPASGDRIGFYKRYCDVFGVSYGPNLNCRDQ 238 (242)
T ss_dssp CCBTTBCCHHHHHTTCCCCCHHHHHTTCCSSHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHHHHHHHTCCCCSCCCCTTC
T ss_pred eCCCCCCchhhhhhccCCCccchhhhcccCChhhheeeecCccccCCCCchHHHHHHHHHHHHHHHhCCCCCCCcCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 024628 263 KSF 265 (265)
Q Consensus 263 ~~f 265 (265)
|||
T Consensus 239 ~~f 241 (242)
T 3w3e_A 239 RPF 241 (242)
T ss_dssp CCC
T ss_pred CCC
Confidence 998
No 2
>3cql_A Endochitinase; glycosyl hydrolase, N-acetyl-D-glucosamine, carbo metabolism, chitin degradation, chitin-binding, glycosidase hydrolase; HET: NDG NAG; 1.50A {Carica papaya} PDB: 1cns_A 2baa_A
Probab=100.00 E-value=6.1e-88 Score=603.83 Aligned_cols=242 Identities=61% Similarity=1.187 Sum_probs=235.9
Q ss_pred ccccccCHHHHHHHhccCCCCCCCCCCccCHHHHHHHHhcCcccccCCCchhhhHHHHHHhhhcccccCCCccCCCCCCC
Q 024628 23 LISNLVSKELFAAIFLHKDDNACPAKGFYTYDSFIQATSCFPRFGNVGSLATRKREIAAFLAQISHETTGGWATAPDGPF 102 (265)
Q Consensus 23 ~v~~~it~~~f~~ifp~r~~~~~~~~~~yty~~fi~A~~~~~~f~~~g~~~~~~re~A~FLAq~~hET~~g~~~~~~~~~ 102 (265)
+|+++||+++|++|||||+++.||+++||||++||+|+++||+|+++|+++++|||+||||||++|||+|||.++++++|
T Consensus 1 ~v~~iit~~~F~~~~~~~~~~~c~~~~fyty~~fi~A~~~fp~f~~~g~~~~~kreiAaFlAq~~hET~gg~~~a~~g~~ 80 (243)
T 3cql_A 1 GIEKIISRSMFDQMLKHRNNPACPAKGFYTYDAFIAAAKSFPSFGTTGSTDVRKREIAAFLGQTSHETTGGWPSAPDGPY 80 (243)
T ss_dssp CGGGTSCHHHHHHHTTTTTCTTSTTTTTSCHHHHHHHHHTSTTTTCSSCHHHHHHHHHHHHHHHHHHTCCCCTTCTTCGG
T ss_pred CHhhhcCHHHHHHHHhcccccCCCccCcccHHHHHHHHHhCchhccCCCcccCHHHHHHHHhhhheecCCCcccCCCCcc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999888999999999
Q ss_pred ccCcceecccCCCCCCCCCCCCCCCCCCCCCcccCCCccccchhhHHHHHHHhCCCCCCChhHhhcChHHHHHHHHHHHH
Q 024628 103 AWGLCFKEEVTPQSDYCDSSNRKWPCYPGKSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVANNSLIAFKTALWFWM 182 (265)
Q Consensus 103 ~w~~~~~~E~~~~~~yc~~~n~~~~~~dG~~Y~GRG~iQLT~~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sA~wfW~ 182 (265)
+|+|||++|+++...||+.. ..|||+||++|||||+||||||+||+++++++|+|||+|||+|++||.+|+++|+||||
T Consensus 81 ~wg~~~~~E~~~~~~Yc~~~-~~~pc~dG~~Y~GRG~IQLT~n~NY~~~g~~lg~dLl~nPdlva~dp~~a~~sA~WfW~ 159 (243)
T 3cql_A 81 AWGYCFLKERNPSSNYCAPS-PRYPCAPGKSYYGRGPIQLSWNYNYGPCGEALRVNLLGNPDLVATDRVISFKTALWFWM 159 (243)
T ss_dssp GCTTCCSBCSSCSSCCCCCC-SSSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCGGGGGTCHHHHHHHHHHHHH
T ss_pred cccceEEeeecCCCCccCCC-CCccCCCCCeeecCCccccchhHHHHHHHHHhCCccccCHHHHhcChHHHHHhHhhhhh
Confidence 99999999999878999866 47999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCccccccccccCChhhhhhccCCCccchhhhhcCCccCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCCCCC
Q 024628 183 TEQKPKPSCHNVMIGKYVPTKADLAANRTVGFGLVTNIINGGLECGIPNDGRVNDRIGYFRRYAKLLNVDTGNNLDCENQ 262 (265)
Q Consensus 183 ~~~~~~ps~h~~~~g~w~p~~~D~~~~~~~~f~~~t~iINGg~ec~~~~~~~~~~R~~~y~~~~~~Lgv~~g~~l~c~~~ 262 (265)
+++.+|||||+||+|+|+|+.+|.++++.++|+.||+|||||+||++++++++++|+++|+++|++|||+||+||+|.+|
T Consensus 160 t~~~~kps~h~vi~g~w~ps~aD~~a~~~~gfg~~t~iINGG~eC~~g~~~~~~dRi~~y~~~~~~Lgv~~g~nl~C~~q 239 (243)
T 3cql_A 160 TPQAPKPSCHDVITGRWQPSAADTAAGRLPGYGVITNIINGGLECGKGPNPQVADRIGFFRRYCGILGVGTGNNLDCYNQ 239 (243)
T ss_dssp CCBTTBCCHHHHHHTCCCCCHHHHHHTCCSSHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHHHHHHHTCCCCSCCCCTTC
T ss_pred cCCCCCCChhhhhhccCCcchhhhhcccCCChhhhheeeeCCccCCCCCchHHHHHHHHHHHHHHHhCCCCCCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 024628 263 KSF 265 (265)
Q Consensus 263 ~~f 265 (265)
|||
T Consensus 240 ~~f 242 (243)
T 3cql_A 240 RPF 242 (243)
T ss_dssp CCC
T ss_pred CCC
Confidence 998
No 3
>2z37_A Chitinase; family 19, conformational changes, hydrolase; 1.53A {Brassica juncea} PDB: 2z38_A 2z39_A
Probab=100.00 E-value=1.5e-87 Score=601.94 Aligned_cols=243 Identities=54% Similarity=1.111 Sum_probs=237.1
Q ss_pred ccccccCHHHHHHHhccCCCCCCCCCCccCHHHHHHHHhcCcccccCCCchhhhHHHHHHhhhcccccCCCccCCCCCCC
Q 024628 23 LISNLVSKELFAAIFLHKDDNACPAKGFYTYDSFIQATSCFPRFGNVGSLATRKREIAAFLAQISHETTGGWATAPDGPF 102 (265)
Q Consensus 23 ~v~~~it~~~f~~ifp~r~~~~~~~~~~yty~~fi~A~~~~~~f~~~g~~~~~~re~A~FLAq~~hET~~g~~~~~~~~~ 102 (265)
+|+++||+++|++|||||+++.||+++||||++||+|+++||+|+++|+++++|||+||||||++|||+|||.++++++|
T Consensus 1 ~v~~iit~~~f~~~~~~~~~~~c~~~~fyty~~fi~A~~~fp~f~~~g~~~~~kreiAaFlAq~~HET~gg~~~a~~g~~ 80 (244)
T 2z37_A 1 DLSGIISRDQFYKMLKHMNDNDCHAVGFFTYDAFITAAKSFPSFGNTGDLAMRKKEIAAFFGQTSHETTGGWSGAPDGAN 80 (244)
T ss_dssp CGGGTSCHHHHHHHTTTTTSTTSSSTTTSCHHHHHHHHTTSTTTTTSSSHHHHHHHHHHHHHHHHHHTCCCCTTSTTCGG
T ss_pred ChhhhCCHHHHHHHHhccCccCCcccCcCcHHHHHHHHHHhhhhccCCCccccHHHHHHHHhhheeecCCccccCCCCcc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred ccCcceecccCCCCCCCCCCCCCCCCCCCCCcccCCCccccchhhHHHHHHHhCCCCCCChhHhhcChHHHHHHHHHHHH
Q 024628 103 AWGLCFKEEVTPQSDYCDSSNRKWPCYPGKSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVANNSLIAFKTALWFWM 182 (265)
Q Consensus 103 ~w~~~~~~E~~~~~~yc~~~n~~~~~~dG~~Y~GRG~iQLT~~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sA~wfW~ 182 (265)
+|+|||++|+++...||+..+..|||+||++|||||+||||||+||+++++++|+|||+|||+|++||.+|+++|+||||
T Consensus 81 ~wg~~~~~E~~~~~~Yc~~~~~~~pc~dG~~Y~GRG~IQLT~~~NY~~~g~~lg~dLl~nPdlva~dp~~a~~sA~WfW~ 160 (244)
T 2z37_A 81 TWGYCYKEEIDKSDPHCDSNNLEWPCAPGKFYYGRGPMMLSWNYNYGPCGRDLGLELLKNPDVASSDPVIAFKTAIWFWM 160 (244)
T ss_dssp GCTTCCSBCSCCCCCCCCTTCSSSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHHHH
T ss_pred cccceEeeeecCCcCCcCcCcCCcccCCCCeeecCCccccchHHHHHHHHHHhCCccccCHHHHhcChHHHHhhhheeeE
Confidence 99999999999888999877668999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCccccccccccCChhhhhhccCCCccchhhhhcCCccCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCCCCC
Q 024628 183 TEQKPKPSCHNVMIGKYVPTKADLAANRTVGFGLVTNIINGGLECGIPNDGRVNDRIGYFRRYAKLLNVDTGNNLDCENQ 262 (265)
Q Consensus 183 ~~~~~~ps~h~~~~g~w~p~~~D~~~~~~~~f~~~t~iINGg~ec~~~~~~~~~~R~~~y~~~~~~Lgv~~g~~l~c~~~ 262 (265)
+++.+|||||+||+|+|+|+.+|.++++.++|+.||+|||||+||++++++++++|+++|+++|++|||+||+||+|.+|
T Consensus 161 t~~~~kps~h~vi~g~w~ps~aD~~a~~~~gfg~~t~iINGG~eC~~~~~~~~~dRi~~y~~~~~~Lgv~~g~nl~c~~~ 240 (244)
T 2z37_A 161 TPQAPKPSCHDVITDQWEPSAADISAGRLPGYGVITNIINGGLECAGRDVAKVQDRISFYTRYCGMFGVDPGSNIDCDNQ 240 (244)
T ss_dssp CCBTTBCCHHHHHTTCCCCCHHHHHTTCCSSHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHTCCCCSCCCCTTS
T ss_pred ECCCCCCchhhhhhccCCcchhhhhcccCCChhhhheeeeCCccCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 024628 263 KSF 265 (265)
Q Consensus 263 ~~f 265 (265)
|||
T Consensus 241 ~~f 243 (244)
T 2z37_A 241 RPF 243 (244)
T ss_dssp CCC
T ss_pred CcC
Confidence 998
No 4
>1dxj_A Class II chitinase; hydrolase, family 19 glycosidase, alpha helical protein; 1.8A {Canavalia ensiformis} SCOP: d.2.1.1
Probab=100.00 E-value=4.2e-86 Score=591.89 Aligned_cols=240 Identities=53% Similarity=1.047 Sum_probs=233.5
Q ss_pred ccccccCHHHHHHHhccCCCCCCCCCCccCHHHHHHHHhcCcccccCCCchhhhHHHHHHhhhcccccCCCccCCCCCCC
Q 024628 23 LISNLVSKELFAAIFLHKDDNACPAKGFYTYDSFIQATSCFPRFGNVGSLATRKREIAAFLAQISHETTGGWATAPDGPF 102 (265)
Q Consensus 23 ~v~~~it~~~f~~ifp~r~~~~~~~~~~yty~~fi~A~~~~~~f~~~g~~~~~~re~A~FLAq~~hET~~g~~~~~~~~~ 102 (265)
+|+++||+++|++|||||+++.||+++||||++||+|+++||+|+++|+++++|||+||||||++|||+|||.++++++|
T Consensus 1 ~v~~~it~~~F~~~~~~~~~~~c~~~~fyty~~fi~A~~~fp~f~~~g~~~~~kreiAaFlAq~~hET~gg~~~~~~~~y 80 (242)
T 1dxj_A 1 DVGSVIDASLFDQLLKHRNDPACEGKGFYSYNAFVTAARSFGGFGTTGDTNTRKREVAAFLAQTSHETTGGAAGSPDGPY 80 (242)
T ss_dssp CGGGTSCHHHHHHHTTTTTCTTSSCSSCSCHHHHHHHHTTSTTTTTSSSHHHHHHHHHHHHHHHHHHTCCCCTTCTTCGG
T ss_pred CHHHhcCHHHHHHHHhccCccCCCccCcccHHHHHHHHHhCchhccCCCcccCHHHHHHHHhhhheecCCCcccCCCCcc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999888999999999
Q ss_pred ccCcceecccCCCCCCCCCCCCCCCCCCCCCcccCCCccccchhhHHHHHHHhCCCCCCChhHhhcChHHHHHHHHHHHH
Q 024628 103 AWGLCFKEEVTPQSDYCDSSNRKWPCYPGKSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVANNSLIAFKTALWFWM 182 (265)
Q Consensus 103 ~w~~~~~~E~~~~~~yc~~~n~~~~~~dG~~Y~GRG~iQLT~~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sA~wfW~ 182 (265)
.|+|||++|+++...||+..+ ||+||++|||||+||||||+||+++++++|+|||+|||+|++||.+|+++|+||||
T Consensus 81 ~wG~~~~~E~~~~~~Yc~~~~---pc~dG~~Y~GRG~IQLT~~~NY~~~g~~lg~dLl~nPdlva~dp~~a~~sA~WfW~ 157 (242)
T 1dxj_A 81 AWGYCFVTERDKSNKYCDPGT---PCPAGKSYYGRGPIQLTHNYNYAQAGRALGVDLINNPDLVARDAVISFKTAIWFWM 157 (242)
T ss_dssp GCTTCCSBCSCCCCCCCCTTS---CCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHHHH
T ss_pred cccceeeeccCCCcccCcCCC---CCCCCCceecCCceecccHHHHHHHHHHhCCccccCHHHHhcChHHHHHhHHHHhh
Confidence 999999999998789998653 89999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCccccccccccCChhhhhhccCCCccchhhhhcCCccCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCCCCC
Q 024628 183 TEQKPKPSCHNVMIGKYVPTKADLAANRTVGFGLVTNIINGGLECGIPNDGRVNDRIGYFRRYAKLLNVDTGNNLDCENQ 262 (265)
Q Consensus 183 ~~~~~~ps~h~~~~g~w~p~~~D~~~~~~~~f~~~t~iINGg~ec~~~~~~~~~~R~~~y~~~~~~Lgv~~g~~l~c~~~ 262 (265)
+++.+||+||+||+|+|+|+.+|.++++.++|+.||+|||||+||++++++++++|+++|+++|++|||+||+||+|.+|
T Consensus 158 t~~~~kps~hdvi~g~w~ps~aD~~a~~~~gfg~~t~iINGG~eC~~g~~~~~~dRi~~y~~~~~~Lgv~~g~nl~C~~~ 237 (242)
T 1dxj_A 158 TPQGNKPSCHDVITNRWTPSAADVAANRTPGFGVITNIINGGIECGRGPSPASGDRIGFYKRYCDVLHLSYGPNLNCRDQ 237 (242)
T ss_dssp CCBTTBCCHHHHHTTCCCCCHHHHHTTCCSSHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHHHHHHHTCCCCSCCCCTTC
T ss_pred cCCCCCCChhhhhhccCCcchhhhhcccCCChhhhheeeeCCcccCCCCchHHHHHHHHHHHHHHHhCCCcCCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 024628 263 KSF 265 (265)
Q Consensus 263 ~~f 265 (265)
|||
T Consensus 238 ~~f 240 (242)
T 1dxj_A 238 RPF 240 (242)
T ss_dssp CCS
T ss_pred CcC
Confidence 998
No 5
>2dkv_A Chitinase; whole structure, oryza sativa L. japonica, hydrolase; HET: MES; 2.00A {Oryza sativa japonica group} PDB: 3iwr_A*
Probab=100.00 E-value=2.4e-83 Score=591.00 Aligned_cols=244 Identities=57% Similarity=1.171 Sum_probs=237.0
Q ss_pred CcccccccCHHHHHHHhccCCCCCCCCCCccCHHHHHHHHhcCcccccCCCchhhhHHHHHHhhhcccccCCCccCCCCC
Q 024628 21 DPLISNLVSKELFAAIFLHKDDNACPAKGFYTYDSFIQATSCFPRFGNVGSLATRKREIAAFLAQISHETTGGWATAPDG 100 (265)
Q Consensus 21 ~~~v~~~it~~~f~~ifp~r~~~~~~~~~~yty~~fi~A~~~~~~f~~~g~~~~~~re~A~FLAq~~hET~~g~~~~~~~ 100 (265)
..+|+++||+++|++|||||+++.||+++||||++||+|+++||+|+++|+++++|||+||||||++|||+++|.+++++
T Consensus 55 ~~~v~~iit~~~f~~~~~~rn~~~c~~~~fyty~~fi~Aa~~fp~F~~tG~~~~~krelAaFLAq~~HETggg~~~~~~~ 134 (309)
T 2dkv_A 55 SDGVGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDG 134 (309)
T ss_dssp -CCGGGTSCHHHHHHHTTTTTCTTCTTTTCSCHHHHHHHHHTCTTTTCSSSHHHHHHHHHHHHHHHHHHHCCCCTTCTTC
T ss_pred CcchhhhccHHHHHHHhhcccccCCCcCCcccHHHHHHHHHhhhhhcccCCccccHHHHHHHHhhcchhcCCCcccCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999998889999999
Q ss_pred CCccCcceecccCCCCCCCCCCCCCCCCCCCCCcccCCCccccchhhHHHHHHHhCCCCCCChhHhhcChHHHHHHHHHH
Q 024628 101 PFAWGLCFKEEVTPQSDYCDSSNRKWPCYPGKSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVANNSLIAFKTALWF 180 (265)
Q Consensus 101 ~~~w~~~~~~E~~~~~~yc~~~n~~~~~~dG~~Y~GRG~iQLT~~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sA~wf 180 (265)
+|+|+|+|++|+++...||+.. ..|||+||++|||||+||||||+||+++++++++|||+|||+|++||.+|+++|+||
T Consensus 135 ~y~wG~~~~~E~~~~~~Yc~~~-~~~pcgdG~~Y~GRG~IQLT~~~NY~~~g~~lg~DLl~nPdlVa~dp~~A~~sA~WF 213 (309)
T 2dkv_A 135 PFSWGYCFKQEQNPPSDYCQPS-PEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWF 213 (309)
T ss_dssp GGGCTTCCSBCSSCSCCCCCCC-SSSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHH
T ss_pred cccccceeeeeecCCCCCcCCC-CCcccCCCCeeecCCcccccchhhHHHHHHHhCCccccCHHHHhcCHHHHHHhhhhh
Confidence 9999999999999878999866 479999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCccccccccccCChhhhhhccCCCccchhhhhcCCccCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCCC
Q 024628 181 WMTEQKPKPSCHNVMIGKYVPTKADLAANRTVGFGLVTNIINGGLECGIPNDGRVNDRIGYFRRYAKLLNVDTGNNLDCE 260 (265)
Q Consensus 181 W~~~~~~~ps~h~~~~g~w~p~~~D~~~~~~~~f~~~t~iINGg~ec~~~~~~~~~~R~~~y~~~~~~Lgv~~g~~l~c~ 260 (265)
||+++.+|||+|+||+|+|+|+.+|.++++.++|+.||+|||||+||++++++++++|+++|++++++|||+||+||+|.
T Consensus 214 W~t~~~~kps~hdvi~g~w~ps~aD~~a~~~~gfg~~t~iINGG~EC~~g~~~~~~dRi~~y~r~~~~Lgv~~g~nl~C~ 293 (309)
T 2dkv_A 214 WMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCY 293 (309)
T ss_dssp HHCCBTTBCCHHHHHTTCCCCCHHHHHTTCCSSHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHHHHHHTTCCCCSCCCCT
T ss_pred eeeCCCCCCChhhhhhcccCcchhhhhcccCCChhheeeEEeCCcccCCCCchHHHHHHHHHHHHHHHhCCCCCCCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 024628 261 NQKSF 265 (265)
Q Consensus 261 ~~~~f 265 (265)
+||||
T Consensus 294 ~q~~f 298 (309)
T 2dkv_A 294 NQRPF 298 (309)
T ss_dssp TSCCC
T ss_pred CCCCc
Confidence 99998
No 6
>3hbe_X Class IV chitinase CHIA4-PA2; endochitinase, family 19, conformational changes, chitin-binding, glycosidase, hydrolase; 1.55A {Picea abies} SCOP: d.2.1.0 PDB: 3hbd_A 3hbh_A
Probab=100.00 E-value=1.8e-73 Score=497.77 Aligned_cols=204 Identities=48% Similarity=0.994 Sum_probs=193.9
Q ss_pred ccccccCHHHHHHHhccCCCCCCCCCCccCHHHHHHHHhcCcccccCCCchhhhHHHHHHhhhcccccCCCccCCCCCCC
Q 024628 23 LISNLVSKELFAAIFLHKDDNACPAKGFYTYDSFIQATSCFPRFGNVGSLATRKREIAAFLAQISHETTGGWATAPDGPF 102 (265)
Q Consensus 23 ~v~~~it~~~f~~ifp~r~~~~~~~~~~yty~~fi~A~~~~~~f~~~g~~~~~~re~A~FLAq~~hET~~g~~~~~~~~~ 102 (265)
+|++|||+++|++|||+| ++.||+++||||++||+|+++||+|+++|+.+++|||+||||||++|||+
T Consensus 1 ~v~~ivt~~~f~~~~~~~-~~~c~~~~fYty~~fi~Aa~~fp~F~~~g~~~~~kreiAaFlAq~~hETg----------- 68 (204)
T 3hbe_X 1 SVGGIISQSFFNGLAGGA-ASSCEGKGFYTYNAFIAAANAYSGFGTTGSNDVKKRELAAFFANVMHETG----------- 68 (204)
T ss_dssp CHHHHSCHHHHHHHHHTS-CTTCTTTTTSCHHHHHHHHHTSTTTTTSSSHHHHHHHHHHHHHHHHHHHT-----------
T ss_pred CHHHhCCHHHHHHHHcCC-CCCCCCCCcccHHHHHHHHHhcchhcCCCCccccHHHHHHHHhhccccCC-----------
Confidence 478999999999999999 56799999999999999999999999999999999999999999999994
Q ss_pred ccCcceecccCCCCCCCCCCCCCCCCCCCCCcccCCCccccchhhHHHHHHHhCCCCCCChhHhhcChHHHHHHHHHHHH
Q 024628 103 AWGLCFKEEVTPQSDYCDSSNRKWPCYPGKSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVANNSLIAFKTALWFWM 182 (265)
Q Consensus 103 ~w~~~~~~E~~~~~~yc~~~n~~~~~~dG~~Y~GRG~iQLT~~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sA~wfW~ 182 (265)
+|||++|+++...||+.+| +|||+||++|||||+||||||+||+++++++++||++|||+|++||.+|+++|+||||
T Consensus 69 --g~~~~~E~~~~~~Ycd~~~-~~pcgdG~~Y~GRG~IQLTg~~NY~~~g~~lg~Dll~nPdlva~dp~~a~~sA~wfW~ 145 (204)
T 3hbe_X 69 --GLCYINEKNPPINYCQSSS-TWPCTSGKSYHGRGPLQLSWNYNYGAAGKSIGFDGLNNPEKVGQDSTISFKTAVWFWM 145 (204)
T ss_dssp --TTTCSBCSSCSSCCCCCCS-SSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCGGGGGTCHHHHHHHHHHHHH
T ss_pred --CcEEEEeccCCCCccCCCC-CCCCCCCCcccCCCceecccHHHHHHHHHHhCCccccCHHHHhhCHHHHHHHHHhhhc
Confidence 6999999998789999886 8999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCccccccccccCChhhhhhccCCCccchhhhhcCCccCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCC
Q 024628 183 TEQKPKPSCHNVMIGKYVPTKADLAANRTVGFGLVTNIINGGLECGIPNDGRVNDRIGYFRRYAKLLNVDTGNNLDC 259 (265)
Q Consensus 183 ~~~~~~ps~h~~~~g~w~p~~~D~~~~~~~~f~~~t~iINGg~ec~~~~~~~~~~R~~~y~~~~~~Lgv~~g~~l~c 259 (265)
+ +|++|+++++ .++|+.||++|| |+||+++++.++++|+++|+++|++|||+||+||+|
T Consensus 146 t----~~~~~~~~~~-------------~~gfg~tt~~IN-G~eC~~~~~~~~~dRi~~Y~r~~~~Lgv~~g~nl~c 204 (204)
T 3hbe_X 146 K----NSNCHSAITS-------------GQGFGGTIKAIN-SMECNGGNSGEVSSRVNYYKKICSQLGVDPGANVSC 204 (204)
T ss_dssp H----SSSHHHHHTT-------------TCHHHHHHHHHH-GGGTTTTCHHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred c----CCCHHHHhcc-------------CCCHHHHHHHHh-ccccCCCCchhHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9 3579998863 378999999999 999999999999999999999999999999999999
No 7
>2cjl_A Chitinase G, secreted chitinase; hydrolase, plant enzymes; 1.5A {Streptomyces coelicolor}
Probab=100.00 E-value=1e-65 Score=450.75 Aligned_cols=200 Identities=46% Similarity=0.877 Sum_probs=186.3
Q ss_pred cccCHHHHHHHhccCCCCCCCCCCccCHHHHHHHHhcCcccccCCCchhhhHHHHHHhhhcccccCCCccCCCCCCCccC
Q 024628 26 NLVSKELFAAIFLHKDDNACPAKGFYTYDSFIQATSCFPRFGNVGSLATRKREIAAFLAQISHETTGGWATAPDGPFAWG 105 (265)
Q Consensus 26 ~~it~~~f~~ifp~r~~~~~~~~~~yty~~fi~A~~~~~~f~~~g~~~~~~re~A~FLAq~~hET~~g~~~~~~~~~~w~ 105 (265)
++||+++|++|||+|+ +||||+.|++|+++||+|+++|+.++++||+||||||++||| | +
T Consensus 1 ~~it~~~f~~i~~~~~-------~fyt~~~~~~A~~~y~~f~~~g~~~~~~~e~AaFlAq~~hET--g-----------g 60 (204)
T 2cjl_A 1 FVVSEAQFDQMFPSRN-------SFYTYSGLTAALSAYPGFSNTGSDTVKKQEAAAFLANVGHET--G-----------G 60 (204)
T ss_dssp CCSCHHHHHHHCTTCC-------TTSCHHHHHHHGGGCTTTTCSSCHHHHHHHHHHHHHHHHHHH--T-----------T
T ss_pred CcCCHHHHHHHhccCC-------ccccHHHHHHHHHHhhhhccCCCCcCCHHHHHHHHhHHHHHc--C-----------C
Confidence 4799999999999986 599999999999999999999988888999999999999999 4 6
Q ss_pred cceecccCCC--CCCCCCCCCCCCCCCC-CCcccCCCccccchhhHHHHHHHhCCCCCCChhHhhcChHHHHHHHHHHHH
Q 024628 106 LCFKEEVTPQ--SDYCDSSNRKWPCYPG-KSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVANNSLIAFKTALWFWM 182 (265)
Q Consensus 106 ~~~~~E~~~~--~~yc~~~n~~~~~~dG-~~Y~GRG~iQLT~~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sA~wfW~ 182 (265)
|++++|+... ..||+.+ ..|+|+|| ++|||||+||||||+||+++++++|+||++|||+|++||.+|++||+||||
T Consensus 61 ~~~~~E~~~~~y~~~c~~~-~~y~~~~g~~~Y~GRG~iQLT~~~NY~~~g~~lg~dll~nPdlv~~dp~~a~~sA~wfW~ 139 (204)
T 2cjl_A 61 LVYVVEQNTANYPHYCDAS-QPYGCPAGNDKYYGRGPVQLSWNFNYKAAGDALGIDLLNNPDLVQNDSAVAWKTGLWYWN 139 (204)
T ss_dssp TTCSBCSCGGGGGGGCCTT-STTCCTTCTTCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHHHH
T ss_pred CcceeecCCCcCccccCCC-CCCCCCCCCccccCCChHHHhHHHHHHHHHHHhCcccccCHHHHhcCHHHHHHHHHHHhh
Confidence 9999999864 3789875 56999999 699999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCC-CccccccccccCChhhhhhccCCCccchhhhhcCCccCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCC
Q 024628 183 TEQKPKP-SCHNVMIGKYVPTKADLAANRTVGFGLVTNIINGGLECGIPNDGRVNDRIGYFRRYAKLLNVDTGNNLDC 259 (265)
Q Consensus 183 ~~~~~~p-s~h~~~~g~w~p~~~D~~~~~~~~f~~~t~iINGg~ec~~~~~~~~~~R~~~y~~~~~~Lgv~~g~~l~c 259 (265)
+++.++| ++|+++.. .++|+.||+|||||+||++++++++++|+++|+++|++|||+||+||+|
T Consensus 140 t~~~~~~~s~~~~~~~-------------~~~f~~~t~~INGg~eC~~~~~~~~~~R~~~y~~~~~~lgv~~g~nl~c 204 (204)
T 2cjl_A 140 TQTGPGTMTPHDAMVN-------------GAGFGETIRSINGSLECDGGNPGQVQSRIDNYERFTQLLGVEPGGNLSC 204 (204)
T ss_dssp HCCTTSSSCHHHHHHT-------------TCCHHHHHHHTTCTTTTTTTCHHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred cCCCCCCCcHHHHHhc-------------CCChhhhhhheeCCccCCCCCcccHHHHHHHHHHHHHHHCCCCCCCCCC
Confidence 9998886 89998852 4889999999999999999999999999999999999999999999999
No 8
>1wvv_A Chitinase C; family 19 chitinase, whole structure, hydrolase; 2.00A {Streptomyces griseus} PDB: 1wvu_A 2dbt_A* 2d49_A
Probab=100.00 E-value=3.4e-64 Score=456.56 Aligned_cols=205 Identities=42% Similarity=0.817 Sum_probs=190.8
Q ss_pred CcccccccCHHHHHHHhccCCCCCCCCCCccCHHHHHHHHhcCcccccCCCchhhhHHHHHHhhhcccccCCCccCCCCC
Q 024628 21 DPLISNLVSKELFAAIFLHKDDNACPAKGFYTYDSFIQATSCFPRFGNVGSLATRKREIAAFLAQISHETTGGWATAPDG 100 (265)
Q Consensus 21 ~~~v~~~it~~~f~~ifp~r~~~~~~~~~~yty~~fi~A~~~~~~f~~~g~~~~~~re~A~FLAq~~hET~~g~~~~~~~ 100 (265)
..+|+++||+++|++|||+|+ +||||+.|++|+++||+|+++|+..+++||+||||||++||| |
T Consensus 57 ~~~v~~~it~~~f~~i~~~~~-------~fyty~~~~~A~~~f~~f~~~g~~~~~~~e~AaFlAq~~hET--g------- 120 (265)
T 1wvv_A 57 GGNNGFVVSEAQFNQMFPNRN-------AFYTYKGLTDALSAYPAFAKTGSDEVKKREAAAFLANVSHQT--G------- 120 (265)
T ss_dssp CCCCCCSSCHHHHHHHCTTCC-------TTCCHHHHHHHGGGSTTTTCSSSHHHHHHHHHHHHHHHHHHH--T-------
T ss_pred CCChhheecHHHHHHHhcccc-------ccccHHHHHHHHHhcccccccCCcccCHHHHHHHHhHHhHhh--c-------
Confidence 467999999999999999986 599999999999999999999988888999999999999999 4
Q ss_pred CCccCcceecccCCC--CCCCCCCCCCCCCCCC-CCcccCCCccccchhhHHHHHHHhCCCCCCChhHhhcChHHHHHHH
Q 024628 101 PFAWGLCFKEEVTPQ--SDYCDSSNRKWPCYPG-KSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVANNSLIAFKTA 177 (265)
Q Consensus 101 ~~~w~~~~~~E~~~~--~~yc~~~n~~~~~~dG-~~Y~GRG~iQLT~~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sA 177 (265)
+|++++|+... ..||+.+ ..|+|+|| ++|||||+||||||+||+++++++|+||++|||+|++||.+|+++|
T Consensus 121 ----g~~~~~E~~~~~y~~~c~~~-~~~~c~~G~~~Y~GRG~IQLT~~~NY~~~g~~lg~dll~nPdlv~~dp~~a~~sA 195 (265)
T 1wvv_A 121 ----GLFYIKEVNEANYPHYCDTT-QSYGCPAGQAAYYGRGPIQLSWNFNYKAAGDALGINLLANPYLVEQDPAVAWKTG 195 (265)
T ss_dssp ----TTTCSBCSCGGGGGGGCCTT-STTCCTTCTTCCSCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHH
T ss_pred ----cceeeEecCCCCCccccccC-CCCCCCCccccccCCCchhhhhHHHHHHHHHHhCcccccCHHHHhcchHHHHHHH
Confidence 69999999864 3789876 46999999 6999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCC-CCccccccccccCChhhhhhccCCCccchhhhhcCCccCCCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 024628 178 LWFWMTEQKPK-PSCHNVMIGKYVPTKADLAANRTVGFGLVTNIINGGLECGIPNDGRVNDRIGYFRRYAKLLNVDTGNN 256 (265)
Q Consensus 178 ~wfW~~~~~~~-ps~h~~~~g~w~p~~~D~~~~~~~~f~~~t~iINGg~ec~~~~~~~~~~R~~~y~~~~~~Lgv~~g~~ 256 (265)
+||||+++.++ |++|+++. | .++|+.||+|||||+||++++++++++|+++|+++|++|||+||+|
T Consensus 196 ~wfW~t~~~~~~~s~~~~~~--------~-----~~gfg~~t~~INGg~eC~~~~~~~~~dR~~~y~~~~~~lgv~~g~n 262 (265)
T 1wvv_A 196 LWYWNSQNGPGTMTPHNAIV--------N-----NAGFGETIRSINGALECNGGNPAQVQSRINKFTQFTQILGTTTGPN 262 (265)
T ss_dssp HHHHHHCCTTSSSCHHHHHH--------T-----TCCHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHTCCCCSC
T ss_pred HHHHhcCCCCCCCchhhhhh--------c-----CCChhheeeeeeCCcccCCCCcccHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999998887 48999875 2 4899999999999999999999999999999999999999999999
Q ss_pred CCC
Q 024628 257 LDC 259 (265)
Q Consensus 257 l~c 259 (265)
|+|
T Consensus 263 l~c 265 (265)
T 1wvv_A 263 LSC 265 (265)
T ss_dssp CCC
T ss_pred CCC
Confidence 999
No 9
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=28.22 E-value=74 Score=22.24 Aligned_cols=36 Identities=14% Similarity=0.130 Sum_probs=25.4
Q ss_pred cccCHHHHHHHhccCCCCCCC--CCCccCHHHHHHHHh
Q 024628 26 NLVSKELFAAIFLHKDDNACP--AKGFYTYDSFIQATS 61 (265)
Q Consensus 26 ~~it~~~f~~ifp~r~~~~~~--~~~~yty~~fi~A~~ 61 (265)
..+|+++++.|+........| +.+-+.|++|+..+.
T Consensus 33 ~~lt~eevd~~i~~~d~~dg~~~~dG~idY~eF~~~m~ 70 (75)
T 1h8b_A 33 RELPPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALY 70 (75)
T ss_dssp HHSCHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHT
T ss_pred hcCCHHHHHHHHHhcCcccCCCCCCCcCcHHHHHHHHh
Confidence 359999999999654311111 347799999998875
No 10
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=22.56 E-value=81 Score=22.07 Aligned_cols=33 Identities=12% Similarity=0.322 Sum_probs=24.9
Q ss_pred cccccCHHHHHHHhccCCCCCCCCCCccCHHHHHHHHh
Q 024628 24 ISNLVSKELFAAIFLHKDDNACPAKGFYTYDSFIQATS 61 (265)
Q Consensus 24 v~~~it~~~f~~ifp~r~~~~~~~~~~yty~~fi~A~~ 61 (265)
++..+|++++++||..-.. .+.-++++|+.++.
T Consensus 2 l~~~~s~~ei~~~~~~~d~-----~g~i~~~eF~~~~~ 34 (109)
T 5pal_A 2 MTKVLKADDINKAISAFKD-----PGTFDYKRFFHLVG 34 (109)
T ss_dssp GGGTSCHHHHHHHHHHTCS-----TTCCCHHHHHHHHT
T ss_pred CCCcCCHHHHHHHHHHhCC-----CCcCcHHHHHHHHh
Confidence 4567899999999964331 46688999998876
Done!