Query 024629
Match_columns 265
No_of_seqs 174 out of 1470
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 11:38:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024629.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024629hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v1y_O PP38, glyceraldehyde-3- 100.0 4.8E-64 1.6E-68 441.1 26.1 264 1-265 1-265 (337)
2 3pym_A GAPDH 3, glyceraldehyde 100.0 1.3E-63 4.4E-68 437.6 27.6 261 3-265 1-261 (332)
3 3lvf_P GAPDH 1, glyceraldehyde 100.0 1E-62 3.5E-67 432.3 27.9 260 3-265 4-266 (338)
4 3doc_A Glyceraldehyde 3-phosph 100.0 3.7E-62 1.2E-66 428.9 27.0 260 2-265 1-263 (335)
5 3ids_C GAPDH, glyceraldehyde-3 100.0 2.8E-62 9.6E-67 432.1 25.1 262 3-265 2-278 (359)
6 4dib_A GAPDH, glyceraldehyde 3 100.0 3.8E-62 1.3E-66 429.2 25.6 259 3-265 4-264 (345)
7 3h9e_O Glyceraldehyde-3-phosph 100.0 8.6E-62 2.9E-66 428.2 27.4 260 3-265 7-267 (346)
8 2b4r_O Glyceraldehyde-3-phosph 100.0 9.1E-61 3.1E-65 423.1 25.7 263 1-265 9-274 (345)
9 1u8f_O GAPDH, glyceraldehyde-3 100.0 8E-61 2.7E-65 427.2 25.2 263 1-265 1-263 (335)
10 1gad_O D-glyceraldehyde-3-phos 100.0 1E-60 3.6E-65 424.6 25.6 259 3-265 1-260 (330)
11 3cmc_O GAPDH, glyceraldehyde-3 100.0 5.6E-60 1.9E-64 420.3 27.1 259 3-265 1-261 (334)
12 1obf_O Glyceraldehyde 3-phosph 100.0 7.5E-60 2.6E-64 416.6 27.5 259 3-265 1-264 (335)
13 2ep7_A GAPDH, glyceraldehyde-3 100.0 3.9E-60 1.3E-64 419.0 24.5 259 3-265 2-263 (342)
14 3hja_A GAPDH, glyceraldehyde-3 100.0 2.7E-60 9.2E-65 419.0 22.8 258 3-265 21-285 (356)
15 3e5r_O PP38, glyceraldehyde-3- 100.0 1.6E-59 5.4E-64 418.4 26.7 265 1-265 1-265 (337)
16 1hdg_O Holo-D-glyceraldehyde-3 100.0 1.2E-59 4.1E-64 417.8 25.6 258 4-265 1-261 (332)
17 3cps_A Glyceraldehyde 3-phosph 100.0 1.3E-59 4.4E-64 419.6 25.0 263 1-265 15-281 (354)
18 2d2i_A Glyceraldehyde 3-phosph 100.0 1.6E-58 5.6E-63 414.8 27.0 260 2-265 1-265 (380)
19 1rm4_O Glyceraldehyde 3-phosph 100.0 1.8E-58 6.2E-63 410.0 26.7 259 3-265 1-263 (337)
20 2g82_O GAPDH, glyceraldehyde-3 100.0 2.7E-58 9.4E-63 408.3 25.6 257 4-265 1-259 (331)
21 3b1j_A Glyceraldehyde 3-phosph 100.0 7.7E-58 2.6E-62 407.3 28.3 260 2-265 1-265 (339)
22 2x5j_O E4PDH, D-erythrose-4-ph 100.0 9.4E-58 3.2E-62 407.0 25.4 259 3-265 2-265 (339)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 3.2E-46 1.1E-50 333.6 15.0 235 2-265 1-248 (343)
24 2r00_A Aspartate-semialdehyde 100.0 5E-44 1.7E-48 319.4 22.5 234 1-265 1-266 (336)
25 2yv3_A Aspartate-semialdehyde 100.0 5.5E-43 1.9E-47 312.0 21.6 228 4-265 1-260 (331)
26 2hjs_A USG-1 protein homolog; 100.0 1.7E-42 6E-47 309.9 20.0 232 2-265 5-268 (340)
27 1cf2_P Protein (glyceraldehyde 100.0 2.9E-43 9.8E-48 314.5 12.1 231 3-265 1-241 (337)
28 4dpk_A Malonyl-COA/succinyl-CO 100.0 2.3E-42 7.9E-47 310.5 17.3 236 3-265 7-270 (359)
29 3pwk_A Aspartate-semialdehyde 100.0 8.7E-42 3E-46 306.6 20.6 232 3-265 2-274 (366)
30 3tz6_A Aspartate-semialdehyde 100.0 1.4E-41 4.7E-46 303.2 21.1 231 4-265 2-277 (344)
31 4dpl_A Malonyl-COA/succinyl-CO 100.0 2.3E-42 7.9E-47 310.5 15.8 236 3-265 7-270 (359)
32 3hsk_A Aspartate-semialdehyde 100.0 1.1E-41 3.8E-46 307.4 16.4 240 1-265 17-296 (381)
33 2ep5_A 350AA long hypothetical 100.0 7.5E-42 2.6E-46 307.2 11.6 237 2-265 3-266 (350)
34 3dr3_A N-acetyl-gamma-glutamyl 100.0 3.8E-41 1.3E-45 299.8 13.2 226 3-265 4-264 (337)
35 3uw3_A Aspartate-semialdehyde 100.0 3.4E-41 1.2E-45 303.6 10.9 233 3-265 4-304 (377)
36 3pzr_A Aspartate-semialdehyde 100.0 1.8E-40 6.1E-45 298.2 12.3 232 4-265 1-296 (370)
37 2ozp_A N-acetyl-gamma-glutamyl 100.0 1.1E-39 3.8E-44 292.3 16.6 229 1-265 1-259 (345)
38 1xyg_A Putative N-acetyl-gamma 100.0 3.5E-40 1.2E-44 296.9 12.9 232 1-265 14-277 (359)
39 1t4b_A Aspartate-semialdehyde 100.0 4.5E-40 1.5E-44 296.5 13.0 232 3-265 1-296 (367)
40 2nqt_A N-acetyl-gamma-glutamyl 100.0 4.2E-40 1.5E-44 295.0 12.6 234 1-265 7-270 (352)
41 1ys4_A Aspartate-semialdehyde 100.0 5.7E-39 2E-43 289.0 16.2 239 2-265 7-272 (354)
42 1vkn_A N-acetyl-gamma-glutamyl 100.0 1.1E-39 3.8E-44 290.9 10.8 230 3-265 13-269 (351)
43 1b7g_O Protein (glyceraldehyde 100.0 8.3E-38 2.8E-42 279.5 15.2 235 3-265 1-241 (340)
44 2czc_A Glyceraldehyde-3-phosph 100.0 1.4E-36 4.7E-41 271.5 16.4 230 2-265 1-239 (334)
45 1nvm_B Acetaldehyde dehydrogen 99.3 4.4E-12 1.5E-16 111.7 7.8 210 1-262 1-225 (312)
46 4f3y_A DHPR, dihydrodipicolina 99.1 2.9E-10 1E-14 98.0 8.8 206 1-248 5-225 (272)
47 3qy9_A DHPR, dihydrodipicolina 99.0 1.2E-09 4.1E-14 92.6 9.8 189 1-249 1-201 (243)
48 3ijp_A DHPR, dihydrodipicolina 98.9 1.1E-09 3.7E-14 94.9 4.8 203 2-248 20-240 (288)
49 4had_A Probable oxidoreductase 98.8 4.1E-09 1.4E-13 93.8 7.2 92 2-123 22-115 (350)
50 1dih_A Dihydrodipicolinate red 98.8 3.8E-08 1.3E-12 84.9 12.9 204 1-249 3-225 (273)
51 4fb5_A Probable oxidoreductase 98.8 5.9E-09 2E-13 93.6 7.5 93 1-123 23-123 (393)
52 3gdo_A Uncharacterized oxidore 98.8 8.4E-09 2.9E-13 92.3 8.1 91 1-123 3-94 (358)
53 1f06_A MESO-diaminopimelate D- 98.8 1.8E-08 6.2E-13 88.9 9.9 89 1-125 1-89 (320)
54 3fhl_A Putative oxidoreductase 98.8 1.1E-08 3.9E-13 91.5 8.6 91 1-123 3-94 (362)
55 3bio_A Oxidoreductase, GFO/IDH 98.8 7.1E-09 2.4E-13 90.8 6.8 88 1-123 7-94 (304)
56 4ew6_A D-galactose-1-dehydroge 98.8 5.9E-09 2E-13 92.3 6.3 86 1-123 23-110 (330)
57 3e18_A Oxidoreductase; dehydro 98.8 6.9E-09 2.4E-13 92.9 6.5 92 1-123 3-94 (359)
58 4h3v_A Oxidoreductase domain p 98.8 2.7E-09 9.2E-14 95.8 3.8 93 1-123 4-104 (390)
59 3evn_A Oxidoreductase, GFO/IDH 98.7 1.2E-08 4.1E-13 90.2 7.0 93 1-123 3-96 (329)
60 3rc1_A Sugar 3-ketoreductase; 98.7 9.9E-09 3.4E-13 91.5 6.5 92 1-123 25-118 (350)
61 3i23_A Oxidoreductase, GFO/IDH 98.7 1.5E-08 5E-13 90.3 7.3 93 2-123 1-94 (349)
62 3kux_A Putative oxidoreductase 98.7 3E-08 1E-12 88.4 9.3 91 1-123 4-96 (352)
63 3m2t_A Probable dehydrogenase; 98.7 2.4E-08 8.1E-13 89.4 8.5 94 1-123 3-97 (359)
64 3ec7_A Putative dehydrogenase; 98.7 2E-08 7E-13 89.7 7.6 94 1-123 21-116 (357)
65 3e82_A Putative oxidoreductase 98.7 2.5E-08 8.5E-13 89.4 7.8 89 3-123 7-96 (364)
66 3f4l_A Putative oxidoreductase 98.7 2.7E-08 9.2E-13 88.4 7.8 91 3-123 2-94 (345)
67 3euw_A MYO-inositol dehydrogen 98.7 2.6E-08 8.9E-13 88.4 7.6 92 1-123 1-94 (344)
68 3e9m_A Oxidoreductase, GFO/IDH 98.7 1.6E-08 5.6E-13 89.4 6.1 93 1-123 3-96 (330)
69 3db2_A Putative NADPH-dependen 98.7 2.2E-08 7.6E-13 89.3 6.8 91 2-123 4-95 (354)
70 3uuw_A Putative oxidoreductase 98.7 1.9E-08 6.5E-13 87.9 6.0 90 1-123 4-95 (308)
71 4hkt_A Inositol 2-dehydrogenas 98.7 3.9E-08 1.3E-12 86.8 7.3 89 3-123 3-92 (331)
72 1p9l_A Dihydrodipicolinate red 98.6 3.9E-07 1.3E-11 77.2 13.1 73 4-123 1-74 (245)
73 4gqa_A NAD binding oxidoreduct 98.6 1.7E-08 5.9E-13 91.8 5.0 93 1-123 23-125 (412)
74 3q2i_A Dehydrogenase; rossmann 98.6 4.1E-08 1.4E-12 87.5 7.2 90 3-123 13-104 (354)
75 3ezy_A Dehydrogenase; structur 98.6 3.1E-08 1.1E-12 88.0 6.4 92 2-123 1-93 (344)
76 2ixa_A Alpha-N-acetylgalactosa 98.6 6.8E-08 2.3E-12 88.9 8.0 100 1-123 18-120 (444)
77 1lc0_A Biliverdin reductase A; 98.6 6.6E-08 2.3E-12 84.2 7.3 86 2-123 6-94 (294)
78 3mz0_A Inositol 2-dehydrogenas 98.6 5.3E-08 1.8E-12 86.4 6.8 93 2-123 1-95 (344)
79 1ydw_A AX110P-like protein; st 98.6 7E-08 2.4E-12 86.3 7.3 95 2-123 5-100 (362)
80 3ohs_X Trans-1,2-dihydrobenzen 98.6 7.5E-08 2.6E-12 85.1 7.2 92 2-123 1-95 (334)
81 1tlt_A Putative oxidoreductase 98.6 9.5E-08 3.2E-12 83.9 7.4 90 1-123 3-94 (319)
82 1h6d_A Precursor form of gluco 98.6 1.1E-07 3.8E-12 87.2 8.2 97 1-123 81-179 (433)
83 2ejw_A HDH, homoserine dehydro 98.5 2.9E-07 1E-11 81.4 9.9 87 1-123 1-96 (332)
84 3cea_A MYO-inositol 2-dehydrog 98.5 1.8E-07 6.1E-12 82.9 8.1 92 2-123 7-100 (346)
85 2ho3_A Oxidoreductase, GFO/IDH 98.5 2.2E-07 7.5E-12 81.8 8.3 90 3-123 1-91 (325)
86 2p2s_A Putative oxidoreductase 98.5 1.3E-07 4.4E-12 83.7 6.8 92 1-123 2-95 (336)
87 3c1a_A Putative oxidoreductase 98.5 1.1E-07 3.8E-12 83.4 6.2 89 3-123 10-98 (315)
88 3ing_A Homoserine dehydrogenas 98.5 3.9E-07 1.3E-11 80.4 9.1 104 1-123 2-115 (325)
89 3moi_A Probable dehydrogenase; 98.5 1.1E-07 3.7E-12 85.9 5.6 90 3-123 2-93 (387)
90 3u3x_A Oxidoreductase; structu 98.5 1.2E-07 4E-12 85.0 5.7 92 1-123 24-117 (361)
91 1zh8_A Oxidoreductase; TM0312, 98.5 2E-07 6.7E-12 82.7 7.1 91 3-123 18-111 (340)
92 3mtj_A Homoserine dehydrogenas 98.5 2.3E-07 7.8E-12 85.1 7.5 91 1-123 8-108 (444)
93 3upl_A Oxidoreductase; rossman 98.5 2.3E-07 8E-12 84.9 7.4 110 2-123 22-137 (446)
94 3o9z_A Lipopolysaccaride biosy 98.5 4.4E-07 1.5E-11 79.6 8.7 90 3-123 3-101 (312)
95 3c8m_A Homoserine dehydrogenas 98.5 1.4E-07 4.6E-12 83.6 5.3 104 1-123 4-119 (331)
96 3oa2_A WBPB; oxidoreductase, s 98.4 6.6E-07 2.3E-11 78.7 8.6 91 3-123 3-102 (318)
97 3dty_A Oxidoreductase, GFO/IDH 98.4 2.1E-07 7.1E-12 84.3 4.6 95 1-123 10-114 (398)
98 3v5n_A Oxidoreductase; structu 98.4 2.5E-07 8.5E-12 84.4 5.2 95 1-123 35-139 (417)
99 3do5_A HOM, homoserine dehydro 98.4 5.2E-07 1.8E-11 79.7 7.0 100 3-123 2-113 (327)
100 3ip3_A Oxidoreductase, putativ 98.4 1.2E-07 4.3E-12 83.8 2.8 94 2-123 1-96 (337)
101 2nvw_A Galactose/lactose metab 98.3 3.1E-07 1.1E-11 85.3 4.5 96 1-123 37-143 (479)
102 3btv_A Galactose/lactose metab 98.3 1.9E-07 6.6E-12 85.7 3.1 95 2-123 19-124 (438)
103 4gmf_A Yersiniabactin biosynth 98.3 1.3E-06 4.4E-11 78.6 8.0 87 3-123 7-99 (372)
104 1xea_A Oxidoreductase, GFO/IDH 98.3 1.8E-06 6.3E-11 75.7 8.4 90 2-123 1-92 (323)
105 2dc1_A L-aspartate dehydrogena 98.2 1.5E-06 5E-11 73.1 5.8 79 4-123 1-79 (236)
106 3oqb_A Oxidoreductase; structu 98.2 1.1E-06 3.7E-11 79.0 4.6 93 1-123 4-112 (383)
107 3ic5_A Putative saccharopine d 98.2 3.7E-06 1.3E-10 61.9 6.5 98 3-126 5-102 (118)
108 2glx_A 1,5-anhydro-D-fructose 98.1 3.5E-06 1.2E-10 74.0 6.7 89 4-123 1-91 (332)
109 1ebf_A Homoserine dehydrogenas 98.0 4.3E-06 1.5E-10 74.7 5.4 35 2-36 3-40 (358)
110 2dt5_A AT-rich DNA-binding pro 98.0 7.4E-06 2.5E-10 67.8 6.2 90 3-123 80-170 (211)
111 1j5p_A Aspartate dehydrogenase 98.0 1.1E-05 3.7E-10 68.4 7.0 80 3-124 12-91 (253)
112 4ina_A Saccharopine dehydrogen 98.0 8.8E-06 3E-10 73.9 6.6 145 4-169 2-157 (405)
113 1vm6_A DHPR, dihydrodipicolina 97.9 5.9E-05 2E-09 62.6 10.1 69 4-123 13-82 (228)
114 2vt3_A REX, redox-sensing tran 97.9 1.7E-05 5.9E-10 65.7 6.3 91 3-124 85-176 (215)
115 3abi_A Putative uncharacterize 97.8 2.4E-05 8.2E-10 69.9 6.4 137 3-174 16-154 (365)
116 2nu8_A Succinyl-COA ligase [AD 97.7 7.4E-05 2.5E-09 64.7 8.0 87 3-123 7-94 (288)
117 3keo_A Redox-sensing transcrip 97.7 2.4E-05 8.3E-10 64.6 3.8 93 3-123 84-178 (212)
118 1y81_A Conserved hypothetical 97.5 0.00041 1.4E-08 53.3 8.2 82 3-123 14-99 (138)
119 3b1f_A Putative prephenate deh 97.5 0.00023 7.7E-09 61.2 7.2 84 1-115 4-88 (290)
120 4huj_A Uncharacterized protein 97.5 3.8E-05 1.3E-09 63.7 2.0 36 1-37 21-56 (220)
121 1r0k_A 1-deoxy-D-xylulose 5-ph 97.4 0.00016 5.4E-09 64.9 5.5 113 1-123 1-122 (388)
122 1oi7_A Succinyl-COA synthetase 97.4 0.00035 1.2E-08 60.4 7.2 87 3-123 7-94 (288)
123 3a06_A 1-deoxy-D-xylulose 5-ph 97.3 0.00038 1.3E-08 61.7 6.8 111 1-123 1-114 (376)
124 3nkl_A UDP-D-quinovosamine 4-d 97.3 0.00078 2.7E-08 51.3 7.5 93 2-123 3-98 (141)
125 2d59_A Hypothetical protein PH 97.2 0.00092 3.2E-08 51.6 7.6 82 3-123 22-107 (144)
126 2duw_A Putative COA-binding pr 97.2 0.00074 2.5E-08 52.2 6.9 84 3-123 13-100 (145)
127 3d1l_A Putative NADP oxidoredu 97.2 0.00038 1.3E-08 59.0 5.7 87 3-123 10-99 (266)
128 2i76_A Hypothetical protein; N 97.2 6.4E-05 2.2E-09 64.4 0.5 86 2-123 1-86 (276)
129 3ggo_A Prephenate dehydrogenas 97.2 0.0012 4E-08 57.7 8.5 88 3-123 33-125 (314)
130 3ius_A Uncharacterized conserv 97.2 0.0032 1.1E-07 53.4 11.0 34 2-36 4-37 (286)
131 3tri_A Pyrroline-5-carboxylate 97.2 0.00046 1.6E-08 59.3 5.7 37 1-37 1-38 (280)
132 3qvo_A NMRA family protein; st 97.2 0.001 3.5E-08 55.1 7.6 35 1-35 21-56 (236)
133 2yv1_A Succinyl-COA ligase [AD 97.1 0.0007 2.4E-08 58.6 6.2 87 3-123 13-100 (294)
134 2yv2_A Succinyl-COA synthetase 97.1 0.0011 3.9E-08 57.4 7.0 87 3-123 13-101 (297)
135 3ff4_A Uncharacterized protein 97.0 0.0021 7.2E-08 48.2 7.0 82 3-124 4-89 (122)
136 3dhn_A NAD-dependent epimerase 97.0 0.0011 3.6E-08 54.3 5.8 35 1-36 1-37 (227)
137 2z2v_A Hypothetical protein PH 96.9 0.0017 5.7E-08 58.0 7.2 93 3-124 16-108 (365)
138 1bg6_A N-(1-D-carboxylethyl)-L 96.9 0.00059 2E-08 60.1 4.0 34 1-36 2-35 (359)
139 3g0o_A 3-hydroxyisobutyrate de 96.9 0.0016 5.3E-08 56.4 6.4 32 3-36 7-38 (303)
140 2ew2_A 2-dehydropantoate 2-red 96.9 0.0021 7.3E-08 55.3 7.1 33 1-34 1-33 (316)
141 1iuk_A Hypothetical protein TT 96.9 0.0022 7.6E-08 49.2 6.4 84 3-123 13-100 (140)
142 3e48_A Putative nucleoside-dip 96.8 0.0016 5.5E-08 55.4 6.1 33 4-36 1-34 (289)
143 3g79_A NDP-N-acetyl-D-galactos 96.8 0.0035 1.2E-07 57.9 8.7 35 2-36 17-52 (478)
144 3gpi_A NAD-dependent epimerase 96.8 0.002 6.9E-08 54.7 6.2 35 1-36 1-35 (286)
145 4e21_A 6-phosphogluconate dehy 96.8 0.00086 3E-08 59.7 3.9 32 3-36 22-53 (358)
146 3ego_A Probable 2-dehydropanto 96.7 0.0059 2E-07 52.9 8.6 31 1-34 1-31 (307)
147 1vpd_A Tartronate semialdehyde 96.7 0.00098 3.4E-08 57.3 3.6 31 4-36 6-36 (299)
148 2izz_A Pyrroline-5-carboxylate 96.7 0.0012 4.2E-08 57.7 4.1 26 1-26 20-45 (322)
149 3slg_A PBGP3 protein; structur 96.7 0.003 1E-07 55.7 6.7 36 1-36 22-58 (372)
150 4gbj_A 6-phosphogluconate dehy 96.7 0.0044 1.5E-07 53.6 7.5 30 1-32 4-33 (297)
151 3c24_A Putative oxidoreductase 96.7 0.0024 8.3E-08 54.6 5.9 84 3-123 11-98 (286)
152 3doj_A AT3G25530, dehydrogenas 96.6 0.0014 4.9E-08 56.9 4.4 32 3-36 21-52 (310)
153 1hdo_A Biliverdin IX beta redu 96.6 0.0034 1.2E-07 50.1 6.4 34 1-35 1-35 (206)
154 3cky_A 2-hydroxymethyl glutara 96.6 0.0012 4.2E-08 56.7 3.8 34 1-36 1-35 (301)
155 3r6d_A NAD-dependent epimerase 96.6 0.0034 1.2E-07 51.2 6.2 35 1-35 3-38 (221)
156 4ezb_A Uncharacterized conserv 96.6 0.0053 1.8E-07 53.6 7.7 33 3-36 24-56 (317)
157 3gt0_A Pyrroline-5-carboxylate 96.6 0.00077 2.6E-08 56.6 2.2 25 2-26 1-25 (247)
158 2ahr_A Putative pyrroline carb 96.6 0.00072 2.5E-08 57.0 1.9 33 3-37 3-35 (259)
159 3i6i_A Putative leucoanthocyan 96.6 0.0019 6.6E-08 56.5 4.7 102 1-125 8-119 (346)
160 2h78_A Hibadh, 3-hydroxyisobut 96.5 0.0015 5.2E-08 56.3 3.8 32 3-36 3-34 (302)
161 3qha_A Putative oxidoreductase 96.5 0.0028 9.6E-08 54.6 5.4 32 3-36 15-46 (296)
162 3pef_A 6-phosphogluconate dehy 96.5 0.0025 8.4E-08 54.6 5.0 31 4-36 2-32 (287)
163 3qsg_A NAD-binding phosphogluc 96.5 0.002 6.7E-08 56.1 4.4 87 3-123 24-114 (312)
164 2rcy_A Pyrroline carboxylate r 96.5 0.0013 4.5E-08 55.3 3.2 26 1-26 2-27 (262)
165 4dll_A 2-hydroxy-3-oxopropiona 96.5 0.0019 6.6E-08 56.3 4.3 32 3-36 31-62 (320)
166 1qyd_A Pinoresinol-lariciresin 96.5 0.0027 9.1E-08 54.5 5.1 35 1-36 1-37 (313)
167 3dqp_A Oxidoreductase YLBE; al 96.5 0.0095 3.2E-07 48.4 8.1 31 5-36 2-33 (219)
168 3ghy_A Ketopantoate reductase 96.4 0.00099 3.4E-08 58.6 2.1 33 1-34 1-33 (335)
169 1qyc_A Phenylcoumaran benzylic 96.4 0.0026 8.8E-08 54.4 4.3 102 1-125 1-113 (308)
170 3e8x_A Putative NAD-dependent 96.4 0.032 1.1E-06 45.7 10.8 34 2-36 20-54 (236)
171 3pid_A UDP-glucose 6-dehydroge 96.4 0.0053 1.8E-07 55.9 6.4 30 3-34 36-65 (432)
172 1yb4_A Tartronic semialdehyde 96.3 0.0017 5.7E-08 55.7 2.7 30 3-33 3-32 (295)
173 1evy_A Glycerol-3-phosphate de 96.2 0.002 6.7E-08 57.2 2.8 30 3-33 15-44 (366)
174 2axq_A Saccharopine dehydrogen 96.2 0.0047 1.6E-07 56.9 5.3 90 3-118 23-113 (467)
175 2g5c_A Prephenate dehydrogenas 96.2 0.0043 1.5E-07 52.8 4.7 87 4-123 2-93 (281)
176 2x0j_A Malate dehydrogenase; o 96.2 0.012 4E-07 50.9 7.4 34 4-37 1-34 (294)
177 3i83_A 2-dehydropantoate 2-red 96.2 0.0092 3.2E-07 51.9 6.9 91 1-114 1-92 (320)
178 2f1k_A Prephenate dehydrogenas 96.2 0.005 1.7E-07 52.3 5.0 78 4-114 1-78 (279)
179 1yqg_A Pyrroline-5-carboxylate 96.2 0.0044 1.5E-07 52.1 4.6 32 4-36 1-32 (263)
180 2uyy_A N-PAC protein; long-cha 96.1 0.0027 9.3E-08 55.0 3.2 32 3-36 30-61 (316)
181 1x0v_A GPD-C, GPDH-C, glycerol 96.1 0.006 2.1E-07 53.6 5.4 25 1-25 6-30 (354)
182 2vns_A Metalloreductase steap3 96.1 0.0052 1.8E-07 50.4 4.6 32 3-36 28-59 (215)
183 3ew7_A LMO0794 protein; Q8Y8U8 96.1 0.02 7E-07 46.1 8.1 32 4-36 1-33 (221)
184 1i36_A Conserved hypothetical 96.1 0.0096 3.3E-07 50.0 6.3 85 4-123 1-85 (264)
185 2zyd_A 6-phosphogluconate dehy 96.1 0.0049 1.7E-07 57.0 4.6 32 1-33 13-44 (480)
186 3k96_A Glycerol-3-phosphate de 96.0 0.007 2.4E-07 53.7 5.4 30 3-33 29-58 (356)
187 3gg2_A Sugar dehydrogenase, UD 96.0 0.0089 3.1E-07 54.8 6.2 32 1-34 1-32 (450)
188 2r6j_A Eugenol synthase 1; phe 96.0 0.0049 1.7E-07 53.1 4.2 96 4-125 12-115 (318)
189 3pdu_A 3-hydroxyisobutyrate de 96.0 0.0019 6.5E-08 55.3 1.5 31 4-36 2-32 (287)
190 2iz1_A 6-phosphogluconate dehy 96.0 0.0052 1.8E-07 56.7 4.4 34 1-36 3-36 (474)
191 3c7a_A Octopine dehydrogenase; 96.0 0.014 4.9E-07 52.3 7.2 32 3-34 2-33 (404)
192 1ff9_A Saccharopine reductase; 96.0 0.0091 3.1E-07 54.7 6.0 93 1-118 1-93 (450)
193 2hmt_A YUAA protein; RCK, KTN, 96.0 0.0095 3.2E-07 44.7 5.1 31 3-34 6-36 (144)
194 3dtt_A NADP oxidoreductase; st 95.9 0.0058 2E-07 51.1 4.2 33 2-36 18-50 (245)
195 2wm3_A NMRA-like family domain 95.9 0.0061 2.1E-07 52.0 4.2 34 3-36 5-39 (299)
196 3llv_A Exopolyphosphatase-rela 95.9 0.011 3.8E-07 44.6 5.2 32 3-35 6-37 (141)
197 3evt_A Phosphoglycerate dehydr 95.9 0.01 3.5E-07 52.0 5.6 30 4-34 138-167 (324)
198 3m2p_A UDP-N-acetylglucosamine 95.8 0.017 5.9E-07 49.4 6.8 34 1-36 1-35 (311)
199 2fp4_A Succinyl-COA ligase [GD 95.8 0.014 4.7E-07 50.7 5.9 87 3-123 13-101 (305)
200 2cvz_A Dehydrogenase, 3-hydrox 95.7 0.0068 2.3E-07 51.6 3.8 30 4-36 2-31 (289)
201 3hn2_A 2-dehydropantoate 2-red 95.7 0.0097 3.3E-07 51.6 4.7 32 1-34 1-32 (312)
202 2qyt_A 2-dehydropantoate 2-red 95.7 0.0057 1.9E-07 52.7 3.1 32 3-34 8-44 (317)
203 3l6d_A Putative oxidoreductase 95.7 0.0034 1.2E-07 54.4 1.7 32 3-36 9-40 (306)
204 3p7m_A Malate dehydrogenase; p 95.7 0.0089 3E-07 52.3 4.3 35 1-36 3-37 (321)
205 2gf2_A Hibadh, 3-hydroxyisobut 95.7 0.0053 1.8E-07 52.5 2.8 30 5-36 2-31 (296)
206 3oj0_A Glutr, glutamyl-tRNA re 95.6 0.0041 1.4E-07 47.5 1.8 32 4-37 22-53 (144)
207 3ruf_A WBGU; rossmann fold, UD 95.6 0.017 5.7E-07 50.3 6.0 34 2-36 24-58 (351)
208 3hwr_A 2-dehydropantoate 2-red 95.6 0.03 1E-06 48.6 7.5 89 3-114 19-107 (318)
209 1np3_A Ketol-acid reductoisome 95.6 0.0069 2.3E-07 53.3 3.4 32 3-36 16-47 (338)
210 2b69_A UDP-glucuronate decarbo 95.6 0.1 3.5E-06 45.1 11.0 33 2-35 26-59 (343)
211 3obb_A Probable 3-hydroxyisobu 95.5 0.0081 2.8E-07 52.0 3.5 32 3-36 3-34 (300)
212 3d4o_A Dipicolinate synthase s 95.5 0.014 5E-07 50.1 5.1 31 3-34 155-185 (293)
213 3c1o_A Eugenol synthase; pheny 95.5 0.0076 2.6E-07 51.9 3.4 100 3-125 4-113 (321)
214 2g1u_A Hypothetical protein TM 95.5 0.034 1.2E-06 42.7 6.7 32 3-35 19-50 (155)
215 3h2s_A Putative NADH-flavin re 95.5 0.026 8.8E-07 45.7 6.3 32 4-36 1-33 (224)
216 3jtm_A Formate dehydrogenase, 95.4 0.016 5.5E-07 51.3 5.2 30 4-34 165-194 (351)
217 1yj8_A Glycerol-3-phosphate de 95.4 0.014 4.9E-07 51.8 4.9 23 3-25 21-43 (375)
218 2gas_A Isoflavone reductase; N 95.4 0.0063 2.2E-07 51.9 2.4 32 3-35 2-34 (307)
219 2rir_A Dipicolinate synthase, 95.4 0.013 4.3E-07 50.6 4.3 31 3-34 157-187 (300)
220 1z82_A Glycerol-3-phosphate de 95.4 0.01 3.5E-07 51.9 3.8 30 3-33 14-43 (335)
221 1zej_A HBD-9, 3-hydroxyacyl-CO 95.4 0.026 9E-07 48.7 6.2 29 4-34 13-41 (293)
222 2bka_A CC3, TAT-interacting pr 95.4 0.057 1.9E-06 44.2 8.1 33 3-35 18-52 (242)
223 1ks9_A KPA reductase;, 2-dehyd 95.2 0.059 2E-06 45.5 8.0 30 4-34 1-30 (291)
224 2x4g_A Nucleoside-diphosphate- 95.2 0.039 1.3E-06 47.6 7.0 33 3-36 13-46 (342)
225 3gvi_A Malate dehydrogenase; N 95.2 0.017 5.9E-07 50.5 4.6 35 1-36 5-39 (324)
226 4g2n_A D-isomer specific 2-hyd 95.2 0.025 8.4E-07 50.0 5.6 30 4-34 174-203 (345)
227 4dgs_A Dehydrogenase; structur 95.2 0.025 8.5E-07 49.9 5.6 30 3-33 171-200 (340)
228 3nep_X Malate dehydrogenase; h 95.2 0.027 9.2E-07 49.1 5.7 34 4-37 1-34 (314)
229 1zcj_A Peroxisomal bifunctiona 95.1 0.053 1.8E-06 49.7 7.7 33 2-36 36-68 (463)
230 3hg7_A D-isomer specific 2-hyd 95.1 0.017 5.7E-07 50.7 4.0 31 3-34 140-170 (324)
231 2pv7_A T-protein [includes: ch 95.0 0.064 2.2E-06 46.1 7.7 28 3-31 21-49 (298)
232 1hyh_A L-hicdh, L-2-hydroxyiso 95.0 0.065 2.2E-06 46.3 7.6 32 4-36 2-34 (309)
233 1xgk_A Nitrogen metabolite rep 94.9 0.04 1.4E-06 48.4 6.3 33 3-36 5-38 (352)
234 2p4q_A 6-phosphogluconate dehy 94.9 0.025 8.5E-07 52.5 5.1 32 3-36 10-41 (497)
235 2ph5_A Homospermidine synthase 94.9 0.047 1.6E-06 50.2 6.7 90 3-123 13-111 (480)
236 1mv8_A GMD, GDP-mannose 6-dehy 94.9 0.038 1.3E-06 50.2 6.2 29 4-33 1-29 (436)
237 2csu_A 457AA long hypothetical 94.9 0.097 3.3E-06 47.9 8.8 83 3-123 8-94 (457)
238 2zcu_A Uncharacterized oxidore 94.9 0.028 9.5E-07 47.3 4.9 32 5-36 1-34 (286)
239 2jl1_A Triphenylmethane reduct 94.8 0.033 1.1E-06 46.8 5.1 32 5-36 2-35 (287)
240 1txg_A Glycerol-3-phosphate de 94.8 0.025 8.6E-07 49.0 4.4 30 4-34 1-30 (335)
241 2pgd_A 6-phosphogluconate dehy 94.7 0.031 1E-06 51.6 5.2 32 3-36 2-33 (482)
242 3mog_A Probable 3-hydroxybutyr 94.6 0.046 1.6E-06 50.5 6.0 32 3-36 5-36 (483)
243 3pp8_A Glyoxylate/hydroxypyruv 94.6 0.015 5.1E-07 50.7 2.6 31 3-34 139-169 (315)
244 1lld_A L-lactate dehydrogenase 94.6 0.084 2.9E-06 45.5 7.4 33 3-36 7-40 (319)
245 3g17_A Similar to 2-dehydropan 94.6 0.031 1.1E-06 47.9 4.5 31 1-33 1-31 (294)
246 3ldh_A Lactate dehydrogenase; 94.5 0.064 2.2E-06 47.0 6.4 34 3-36 21-54 (330)
247 3gvx_A Glycerate dehydrogenase 94.5 0.018 6.3E-07 49.6 2.9 30 4-34 123-152 (290)
248 2j6i_A Formate dehydrogenase; 94.5 0.027 9.4E-07 50.0 4.1 30 3-33 164-194 (364)
249 1ldn_A L-lactate dehydrogenase 94.5 0.031 1.1E-06 48.7 4.4 34 3-36 6-39 (316)
250 1guz_A Malate dehydrogenase; o 94.5 0.072 2.5E-06 46.1 6.7 30 4-33 1-31 (310)
251 3vku_A L-LDH, L-lactate dehydr 94.5 0.1 3.5E-06 45.6 7.6 34 3-36 9-42 (326)
252 2raf_A Putative dinucleotide-b 94.5 0.082 2.8E-06 42.9 6.6 24 3-26 19-42 (209)
253 2v6b_A L-LDH, L-lactate dehydr 94.5 0.085 2.9E-06 45.5 7.0 33 4-36 1-33 (304)
254 3l4b_C TRKA K+ channel protien 94.4 0.036 1.2E-06 45.2 4.3 31 4-35 1-31 (218)
255 4a7p_A UDP-glucose dehydrogena 94.3 0.065 2.2E-06 49.0 6.2 33 3-36 8-40 (446)
256 3dfz_A SIRC, precorrin-2 dehyd 94.2 0.43 1.5E-05 39.3 10.5 94 3-129 31-125 (223)
257 1oju_A MDH, malate dehydrogena 94.2 0.066 2.3E-06 46.1 5.7 33 4-36 1-33 (294)
258 3oh8_A Nucleoside-diphosphate 94.2 0.33 1.1E-05 44.8 10.9 33 3-36 147-180 (516)
259 3ktd_A Prephenate dehydrogenas 94.2 0.014 4.9E-07 51.4 1.5 30 3-33 8-37 (341)
260 2c5a_A GDP-mannose-3', 5'-epim 94.1 0.12 4.2E-06 45.5 7.5 33 3-36 29-62 (379)
261 3ba1_A HPPR, hydroxyphenylpyru 94.1 0.07 2.4E-06 46.8 5.8 30 3-33 164-193 (333)
262 2gn4_A FLAA1 protein, UDP-GLCN 94.1 0.11 3.6E-06 45.5 7.0 33 3-35 21-55 (344)
263 2gcg_A Glyoxylate reductase/hy 94.1 0.038 1.3E-06 48.3 4.1 31 3-34 155-185 (330)
264 3c85_A Putative glutathione-re 94.1 0.12 4.1E-06 40.6 6.7 31 4-35 40-71 (183)
265 2yjz_A Metalloreductase steap4 93.1 0.0092 3.1E-07 48.5 0.0 29 3-32 19-47 (201)
266 2w2k_A D-mandelate dehydrogena 93.9 0.035 1.2E-06 49.0 3.5 29 4-33 164-193 (348)
267 4aj2_A L-lactate dehydrogenase 93.8 0.091 3.1E-06 46.0 5.9 35 2-36 18-52 (331)
268 1y1p_A ARII, aldehyde reductas 93.8 0.32 1.1E-05 41.6 9.4 32 3-35 11-43 (342)
269 2nac_A NAD-dependent formate d 93.7 0.051 1.7E-06 48.8 4.1 31 3-34 191-221 (393)
270 1id1_A Putative potassium chan 93.6 0.064 2.2E-06 41.0 4.1 34 1-35 1-34 (153)
271 3mwd_B ATP-citrate synthase; A 93.5 0.2 6.7E-06 44.0 7.4 93 3-123 10-110 (334)
272 2hk9_A Shikimate dehydrogenase 93.4 0.11 3.9E-06 44.0 5.7 31 4-36 130-160 (275)
273 3k5p_A D-3-phosphoglycerate de 93.3 0.081 2.8E-06 47.8 4.8 29 4-33 157-185 (416)
274 3hhp_A Malate dehydrogenase; M 93.1 0.1 3.4E-06 45.4 5.0 33 4-36 1-35 (312)
275 1t2d_A LDH-P, L-lactate dehydr 93.1 0.11 3.9E-06 45.2 5.4 36 1-37 1-37 (322)
276 2o3j_A UDP-glucose 6-dehydroge 93.1 0.068 2.3E-06 49.3 4.2 33 2-34 8-41 (481)
277 1ur5_A Malate dehydrogenase; o 93.1 0.11 3.8E-06 44.9 5.3 35 1-37 1-35 (309)
278 1lss_A TRK system potassium up 92.9 0.13 4.6E-06 37.9 4.9 31 3-34 4-34 (140)
279 2q3e_A UDP-glucose 6-dehydroge 92.8 0.082 2.8E-06 48.5 4.2 33 1-33 2-36 (467)
280 3hdj_A Probable ornithine cycl 92.7 0.026 8.7E-07 49.2 0.6 37 4-42 122-159 (313)
281 3ko8_A NAD-dependent epimerase 92.6 0.6 2.1E-05 39.4 9.2 31 4-35 1-32 (312)
282 1xq6_A Unknown protein; struct 92.5 0.17 5.8E-06 41.3 5.4 35 1-35 2-38 (253)
283 2y1e_A 1-deoxy-D-xylulose 5-ph 92.5 0.14 4.8E-06 45.4 5.0 111 3-123 21-134 (398)
284 3phh_A Shikimate dehydrogenase 92.4 0.71 2.4E-05 39.1 9.3 30 4-34 119-148 (269)
285 4e12_A Diketoreductase; oxidor 92.4 0.14 4.8E-06 43.5 4.9 34 1-36 1-35 (283)
286 1q0q_A 1-deoxy-D-xylulose 5-ph 92.4 0.17 5.7E-06 45.1 5.4 112 3-123 9-130 (406)
287 1x7d_A Ornithine cyclodeaminas 92.2 0.084 2.9E-06 46.6 3.3 35 3-37 129-163 (350)
288 3d0o_A L-LDH 1, L-lactate dehy 92.2 0.12 4E-06 45.0 4.1 35 2-36 5-39 (317)
289 3au8_A 1-deoxy-D-xylulose 5-ph 91.7 0.17 5.7E-06 45.9 4.6 41 2-43 76-121 (488)
290 4fgw_A Glycerol-3-phosphate de 91.7 0.13 4.3E-06 46.2 3.9 23 3-25 34-56 (391)
291 2hun_A 336AA long hypothetical 91.6 0.15 5.3E-06 43.7 4.3 35 1-35 1-37 (336)
292 3fr7_A Putative ketol-acid red 91.6 0.072 2.5E-06 49.1 2.2 30 4-33 55-89 (525)
293 2hjr_A Malate dehydrogenase; m 91.4 0.24 8.4E-06 43.1 5.4 34 3-37 14-47 (328)
294 1oc2_A DTDP-glucose 4,6-dehydr 91.2 0.18 6E-06 43.6 4.3 35 1-35 1-38 (348)
295 4b8w_A GDP-L-fucose synthase; 91.1 0.17 5.9E-06 42.6 4.0 27 1-27 4-31 (319)
296 3eag_A UDP-N-acetylmuramate:L- 91.1 0.73 2.5E-05 39.9 8.1 86 3-118 4-91 (326)
297 3fwz_A Inner membrane protein 90.7 0.23 7.7E-06 37.3 4.0 33 3-36 7-39 (140)
298 2ewd_A Lactate dehydrogenase,; 90.7 0.26 9E-06 42.6 4.9 36 1-37 1-37 (317)
299 3kkj_A Amine oxidase, flavin-c 90.7 0.2 6.7E-06 40.2 3.9 31 1-33 1-31 (336)
300 4gwg_A 6-phosphogluconate dehy 90.7 0.17 5.9E-06 46.6 3.8 34 1-36 2-35 (484)
301 2bma_A Glutamate dehydrogenase 90.5 1.3 4.3E-05 40.6 9.3 104 3-123 252-365 (470)
302 1e6u_A GDP-fucose synthetase; 90.5 0.2 7E-06 42.6 4.0 32 1-33 1-33 (321)
303 3ce6_A Adenosylhomocysteinase; 90.5 0.21 7.4E-06 46.1 4.3 29 4-33 275-303 (494)
304 4egb_A DTDP-glucose 4,6-dehydr 90.2 0.25 8.5E-06 42.6 4.3 34 3-36 24-59 (346)
305 2d4a_B Malate dehydrogenase; a 90.2 0.26 8.9E-06 42.6 4.4 31 5-36 1-31 (308)
306 4b4o_A Epimerase family protei 90.1 0.31 1.1E-05 41.2 4.7 31 4-35 1-32 (298)
307 2a35_A Hypothetical protein PA 90.1 0.29 9.9E-06 38.9 4.3 32 3-34 5-38 (215)
308 1gpj_A Glutamyl-tRNA reductase 90.0 0.25 8.6E-06 44.3 4.2 30 4-34 168-198 (404)
309 1f0y_A HCDH, L-3-hydroxyacyl-C 89.8 0.36 1.2E-05 41.2 4.9 32 3-36 15-46 (302)
310 3vps_A TUNA, NAD-dependent epi 89.7 0.31 1.1E-05 41.3 4.4 33 3-36 7-40 (321)
311 3dfu_A Uncharacterized protein 89.6 0.12 4.2E-06 42.9 1.7 32 3-35 6-37 (232)
312 3lk7_A UDP-N-acetylmuramoylala 89.5 1.2 4.2E-05 40.3 8.5 86 4-118 10-97 (451)
313 2pi1_A D-lactate dehydrogenase 89.3 0.36 1.2E-05 42.3 4.5 30 4-34 142-171 (334)
314 3two_A Mannitol dehydrogenase; 89.2 0.49 1.7E-05 41.2 5.4 81 4-117 178-258 (348)
315 1y6j_A L-lactate dehydrogenase 89.0 0.34 1.2E-05 42.0 4.2 34 3-36 7-40 (318)
316 1y7t_A Malate dehydrogenase; N 89.0 0.36 1.2E-05 41.8 4.4 33 1-33 1-41 (327)
317 1qp8_A Formate dehydrogenase; 88.9 0.38 1.3E-05 41.4 4.4 30 3-33 124-153 (303)
318 2dpo_A L-gulonate 3-dehydrogen 88.8 0.35 1.2E-05 42.0 4.1 32 3-36 6-37 (319)
319 1pzg_A LDH, lactate dehydrogen 88.8 0.44 1.5E-05 41.6 4.7 34 3-37 9-42 (331)
320 3sxp_A ADP-L-glycero-D-mannohe 88.7 0.39 1.3E-05 41.8 4.4 34 3-36 10-45 (362)
321 3gg9_A D-3-phosphoglycerate de 88.4 0.44 1.5E-05 42.0 4.5 31 3-34 160-190 (352)
322 1xdw_A NAD+-dependent (R)-2-hy 88.4 0.44 1.5E-05 41.6 4.5 29 4-33 147-175 (331)
323 1gdh_A D-glycerate dehydrogena 88.3 0.48 1.6E-05 41.1 4.7 30 4-34 147-176 (320)
324 3sc6_A DTDP-4-dehydrorhamnose 88.3 0.35 1.2E-05 40.4 3.7 31 4-35 6-37 (287)
325 1dxy_A D-2-hydroxyisocaproate 88.2 0.46 1.6E-05 41.5 4.5 30 4-34 146-175 (333)
326 2cuk_A Glycerate dehydrogenase 88.1 0.53 1.8E-05 40.7 4.8 30 3-33 144-173 (311)
327 2yq5_A D-isomer specific 2-hyd 88.1 0.48 1.6E-05 41.6 4.5 30 4-34 149-178 (343)
328 1sb8_A WBPP; epimerase, 4-epim 88.0 0.46 1.6E-05 41.1 4.4 33 2-35 26-59 (352)
329 1jay_A Coenzyme F420H2:NADP+ o 88.0 0.67 2.3E-05 37.0 5.1 30 4-34 1-31 (212)
330 3pqe_A L-LDH, L-lactate dehydr 88.0 0.41 1.4E-05 41.8 4.0 34 3-36 5-38 (326)
331 4fcc_A Glutamate dehydrogenase 87.9 2.5 8.6E-05 38.4 9.2 101 3-120 235-345 (450)
332 2dbq_A Glyoxylate reductase; D 87.9 0.49 1.7E-05 41.3 4.5 31 3-34 150-180 (334)
333 2g76_A 3-PGDH, D-3-phosphoglyc 87.9 0.52 1.8E-05 41.2 4.7 31 3-34 165-195 (335)
334 1bgv_A Glutamate dehydrogenase 87.9 1.5 5.1E-05 39.9 7.7 103 3-123 230-343 (449)
335 4e5n_A Thermostable phosphite 87.8 0.42 1.4E-05 41.7 4.0 31 3-34 145-175 (330)
336 4h7p_A Malate dehydrogenase; s 87.7 0.56 1.9E-05 41.2 4.7 27 1-27 22-49 (345)
337 1mx3_A CTBP1, C-terminal bindi 87.7 0.54 1.9E-05 41.3 4.7 30 3-33 168-197 (347)
338 1wwk_A Phosphoglycerate dehydr 87.6 0.54 1.8E-05 40.5 4.5 31 3-34 142-172 (307)
339 2ekl_A D-3-phosphoglycerate de 87.6 0.54 1.8E-05 40.7 4.5 31 3-34 142-172 (313)
340 4hy3_A Phosphoglycerate oxidor 87.5 0.49 1.7E-05 41.9 4.3 30 4-34 177-206 (365)
341 1j4a_A D-LDH, D-lactate dehydr 87.4 0.54 1.9E-05 41.0 4.5 30 4-34 147-176 (333)
342 2d0i_A Dehydrogenase; structur 87.4 0.53 1.8E-05 41.1 4.4 30 3-33 146-175 (333)
343 3oet_A Erythronate-4-phosphate 87.3 0.56 1.9E-05 41.8 4.5 29 4-33 120-148 (381)
344 2bll_A Protein YFBG; decarboxy 87.3 0.63 2.2E-05 39.8 4.8 33 4-36 1-34 (345)
345 3kb6_A D-lactate dehydrogenase 87.3 0.53 1.8E-05 41.2 4.3 29 4-33 142-170 (334)
346 3tl2_A Malate dehydrogenase; c 87.0 0.73 2.5E-05 39.9 5.0 32 3-36 8-40 (315)
347 1gtm_A Glutamate dehydrogenase 86.9 0.68 2.3E-05 41.8 4.9 34 3-37 212-246 (419)
348 1b8p_A Protein (malate dehydro 86.9 0.55 1.9E-05 40.8 4.2 25 3-27 5-30 (329)
349 2o4c_A Erythronate-4-phosphate 86.8 0.61 2.1E-05 41.5 4.5 30 3-33 116-145 (380)
350 2z1m_A GDP-D-mannose dehydrata 86.7 0.68 2.3E-05 39.5 4.7 35 1-36 1-36 (345)
351 1dlj_A UDP-glucose dehydrogena 86.7 0.57 2E-05 41.9 4.3 29 4-34 1-29 (402)
352 3iwa_A FAD-dependent pyridine 86.7 0.45 1.6E-05 43.2 3.7 36 1-36 1-37 (472)
353 3kd9_A Coenzyme A disulfide re 86.6 0.54 1.8E-05 42.4 4.1 35 1-35 1-36 (449)
354 2yy7_A L-threonine dehydrogena 86.4 0.48 1.7E-05 40.0 3.5 34 1-35 1-36 (312)
355 2q1w_A Putative nucleotide sug 86.2 0.78 2.7E-05 39.3 4.8 33 2-35 20-53 (333)
356 2q1s_A Putative nucleotide sug 86.1 0.75 2.6E-05 40.2 4.7 33 3-35 32-65 (377)
357 1ez4_A Lactate dehydrogenase; 86.1 0.57 1.9E-05 40.6 3.9 34 3-36 5-38 (318)
358 1sc6_A PGDH, D-3-phosphoglycer 86.1 0.64 2.2E-05 41.7 4.3 29 4-33 146-174 (404)
359 4ea9_A Perosamine N-acetyltran 86.0 0.79 2.7E-05 37.1 4.5 33 3-36 12-44 (220)
360 3u62_A Shikimate dehydrogenase 86.0 0.24 8.4E-06 41.5 1.4 31 5-36 110-140 (253)
361 3fi9_A Malate dehydrogenase; s 86.0 0.66 2.2E-05 40.7 4.2 26 1-26 6-32 (343)
362 2ydy_A Methionine adenosyltran 85.9 0.83 2.8E-05 38.6 4.8 32 1-34 1-33 (315)
363 2c20_A UDP-glucose 4-epimerase 85.7 0.83 2.8E-05 38.9 4.7 31 4-35 2-33 (330)
364 3r3j_A Glutamate dehydrogenase 85.7 1.7 5.7E-05 39.6 6.8 104 3-123 239-352 (456)
365 4a9w_A Monooxygenase; baeyer-v 85.7 0.58 2E-05 40.0 3.7 33 1-34 1-33 (357)
366 3ehe_A UDP-glucose 4-epimerase 85.7 0.68 2.3E-05 39.2 4.1 31 4-36 2-33 (313)
367 2hrz_A AGR_C_4963P, nucleoside 85.4 0.7 2.4E-05 39.6 4.1 35 1-35 12-53 (342)
368 3st7_A Capsular polysaccharide 85.3 0.55 1.9E-05 41.0 3.4 31 4-34 1-32 (369)
369 2zqz_A L-LDH, L-lactate dehydr 85.1 0.75 2.6E-05 40.0 4.1 34 3-36 9-42 (326)
370 3rft_A Uronate dehydrogenase; 85.1 0.68 2.3E-05 38.5 3.8 33 1-34 1-34 (267)
371 1smk_A Malate dehydrogenase, g 84.9 1 3.6E-05 39.0 5.0 33 3-36 8-42 (326)
372 3hyw_A Sulfide-quinone reducta 84.8 0.8 2.7E-05 41.1 4.3 35 1-36 1-36 (430)
373 1rkx_A CDP-glucose-4,6-dehydra 84.6 0.86 2.9E-05 39.4 4.3 33 3-36 9-42 (357)
374 2y0c_A BCEC, UDP-glucose dehyd 84.4 0.9 3.1E-05 41.7 4.5 31 3-34 8-38 (478)
375 2ywl_A Thioredoxin reductase r 84.4 0.95 3.2E-05 34.9 4.1 31 3-34 1-31 (180)
376 4hb9_A Similarities with proba 84.4 0.94 3.2E-05 39.5 4.5 29 4-33 2-30 (412)
377 1z7e_A Protein aRNA; rossmann 84.2 1 3.5E-05 42.8 5.0 35 2-36 314-349 (660)
378 1pjq_A CYSG, siroheme synthase 84.0 5.4 0.00018 36.2 9.6 86 3-119 12-99 (457)
379 1orr_A CDP-tyvelose-2-epimeras 83.7 1.1 3.7E-05 38.4 4.5 30 4-34 2-32 (347)
380 2bi7_A UDP-galactopyranose mut 83.7 1.2 4.1E-05 39.4 4.9 34 1-35 1-34 (384)
381 2cul_A Glucose-inhibited divis 83.6 0.91 3.1E-05 37.0 3.8 34 1-35 1-34 (232)
382 2x6t_A ADP-L-glycero-D-manno-h 83.6 1 3.4E-05 39.0 4.3 32 4-35 47-79 (357)
383 1kew_A RMLB;, DTDP-D-glucose 4 83.6 0.94 3.2E-05 39.1 4.1 31 5-35 2-33 (361)
384 3enk_A UDP-glucose 4-epimerase 83.6 1.5 5.1E-05 37.4 5.4 32 3-35 5-37 (341)
385 3o8q_A Shikimate 5-dehydrogena 83.5 2.3 8E-05 36.0 6.5 32 3-36 126-158 (281)
386 3d1c_A Flavin-containing putat 83.5 0.95 3.3E-05 39.1 4.1 33 1-34 2-35 (369)
387 2i99_A MU-crystallin homolog; 83.5 0.94 3.2E-05 39.0 4.0 35 3-37 135-169 (312)
388 3don_A Shikimate dehydrogenase 83.4 0.48 1.6E-05 40.3 2.1 32 4-36 118-149 (277)
389 4g65_A TRK system potassium up 83.2 1.3 4.3E-05 40.5 4.9 93 4-123 236-331 (461)
390 1mld_A Malate dehydrogenase; o 83.1 1.1 3.9E-05 38.6 4.4 33 4-36 1-34 (314)
391 3k6j_A Protein F01G10.3, confi 83.1 1.3 4.4E-05 40.5 4.9 31 3-34 54-84 (460)
392 3bfp_A Acetyltransferase; LEFT 83.0 0.88 3E-05 36.2 3.4 34 1-35 1-34 (194)
393 1ek6_A UDP-galactose 4-epimera 83.0 1.2 4.1E-05 38.2 4.5 32 1-34 1-33 (348)
394 1yqd_A Sinapyl alcohol dehydro 82.8 1 3.4E-05 39.6 4.0 32 4-36 189-220 (366)
395 3h5n_A MCCB protein; ubiquitin 82.4 2 6.8E-05 37.7 5.8 33 3-36 118-150 (353)
396 3fbs_A Oxidoreductase; structu 82.3 1.2 4.2E-05 36.9 4.2 32 2-34 1-32 (297)
397 2pzm_A Putative nucleotide sug 82.3 1.5 5.2E-05 37.4 4.9 32 3-35 20-52 (330)
398 3vtf_A UDP-glucose 6-dehydroge 82.3 1 3.5E-05 40.9 3.9 30 3-33 21-50 (444)
399 3jv7_A ADH-A; dehydrogenase, n 82.2 0.67 2.3E-05 40.2 2.6 33 4-36 173-205 (345)
400 4dvj_A Putative zinc-dependent 82.2 1.1 3.9E-05 39.2 4.2 33 4-36 173-206 (363)
401 1ygy_A PGDH, D-3-phosphoglycer 82.2 1.5 5.1E-05 40.8 5.1 30 3-33 142-171 (529)
402 3lov_A Protoporphyrinogen oxid 82.2 1.1 3.8E-05 40.3 4.2 35 1-35 2-37 (475)
403 2xdo_A TETX2 protein; tetracyc 82.1 1.6 5.4E-05 38.4 5.1 31 3-34 26-56 (398)
404 2vou_A 2,6-dihydroxypyridine h 82.0 1.5 5.2E-05 38.6 4.9 32 2-34 4-35 (397)
405 3ics_A Coenzyme A-disulfide re 81.9 1.1 3.8E-05 41.8 4.2 36 1-36 34-70 (588)
406 1a5z_A L-lactate dehydrogenase 81.9 1.1 3.9E-05 38.6 3.9 32 4-36 1-33 (319)
407 1t2a_A GDP-mannose 4,6 dehydra 81.7 1.6 5.6E-05 37.9 5.0 32 4-36 25-57 (375)
408 3qj4_A Renalase; FAD/NAD(P)-bi 81.3 1.8 6.3E-05 37.0 5.1 31 4-34 2-34 (342)
409 3ay3_A NAD-dependent epimerase 81.2 0.62 2.1E-05 38.6 2.0 32 3-35 2-34 (267)
410 3alj_A 2-methyl-3-hydroxypyrid 81.2 1.5 5.2E-05 38.2 4.6 33 1-34 9-41 (379)
411 2b5w_A Glucose dehydrogenase; 81.2 3.1 0.0001 36.2 6.5 32 4-36 174-208 (357)
412 2tmg_A Protein (glutamate dehy 81.1 2.2 7.6E-05 38.4 5.6 35 3-37 209-243 (415)
413 1rp0_A ARA6, thiazole biosynth 81.0 1.2 4E-05 37.5 3.7 33 3-35 39-71 (284)
414 1yo6_A Putative carbonyl reduc 80.8 2.1 7.1E-05 34.6 5.0 35 1-35 1-37 (250)
415 1n7h_A GDP-D-mannose-4,6-dehyd 80.8 1.7 5.9E-05 37.8 4.8 32 4-36 29-61 (381)
416 4id9_A Short-chain dehydrogena 80.7 1.5 5.2E-05 37.5 4.4 32 3-35 19-51 (347)
417 2xxj_A L-LDH, L-lactate dehydr 80.7 1.6 5.5E-05 37.5 4.5 33 4-36 1-33 (310)
418 1pgj_A 6PGDH, 6-PGDH, 6-phosph 80.7 1.1 3.8E-05 41.0 3.6 31 4-36 2-32 (478)
419 4g65_A TRK system potassium up 80.6 1.3 4.4E-05 40.4 4.0 32 3-35 3-34 (461)
420 1rpn_A GDP-mannose 4,6-dehydra 80.5 2.2 7.4E-05 36.3 5.3 33 3-36 14-47 (335)
421 1yvv_A Amine oxidase, flavin-c 80.5 1.3 4.5E-05 37.6 3.9 30 3-33 2-31 (336)
422 3ado_A Lambda-crystallin; L-gu 80.3 1.5 5E-05 38.1 4.0 31 4-36 7-37 (319)
423 3pwz_A Shikimate dehydrogenase 80.0 3.1 0.00011 35.0 6.0 32 4-36 121-152 (272)
424 1omo_A Alanine dehydrogenase; 80.0 1.5 5.1E-05 38.0 4.0 35 3-37 125-159 (322)
425 1o6z_A MDH, malate dehydrogena 79.8 1.8 6.1E-05 37.1 4.5 32 4-36 1-34 (303)
426 3fef_A Putative glucosidase LP 79.8 1.7 5.8E-05 39.6 4.5 36 1-36 3-41 (450)
427 2gv8_A Monooxygenase; FMO, FAD 79.7 2.1 7.2E-05 38.4 5.1 31 3-34 6-38 (447)
428 3sx6_A Sulfide-quinone reducta 79.6 1.4 4.8E-05 39.5 3.9 36 1-36 1-39 (437)
429 1uuf_A YAHK, zinc-type alcohol 79.4 0.99 3.4E-05 39.7 2.7 31 4-35 196-226 (369)
430 4f6c_A AUSA reductase domain p 79.3 1.9 6.5E-05 38.4 4.6 34 3-37 69-103 (427)
431 3aog_A Glutamate dehydrogenase 79.2 2.5 8.6E-05 38.3 5.3 34 3-37 235-268 (440)
432 3nzo_A UDP-N-acetylglucosamine 79.2 1.5 5.1E-05 39.0 3.9 32 3-34 35-67 (399)
433 3ouz_A Biotin carboxylase; str 79.0 1.6 5.4E-05 39.3 4.0 35 1-36 4-38 (446)
434 3ef6_A Toluene 1,2-dioxygenase 79.0 2.4 8.2E-05 37.6 5.2 35 1-36 1-36 (410)
435 3fbt_A Chorismate mutase and s 78.8 1.8 6.3E-05 36.8 4.1 31 4-36 123-154 (282)
436 4hv4_A UDP-N-acetylmuramate--L 78.7 4.4 0.00015 37.1 7.0 84 3-118 22-106 (494)
437 2rh8_A Anthocyanidin reductase 78.7 2.4 8.3E-05 36.1 5.0 32 3-35 9-41 (338)
438 3d64_A Adenosylhomocysteinase; 78.6 2.1 7.2E-05 39.4 4.7 30 3-33 277-306 (494)
439 2v6g_A Progesterone 5-beta-red 78.2 2.4 8.3E-05 36.4 4.9 33 4-36 2-39 (364)
440 4e2x_A TCAB9; kijanose, tetron 78.1 3 0.0001 37.0 5.6 83 4-119 320-405 (416)
441 1vl0_A DTDP-4-dehydrorhamnose 78.0 2.2 7.6E-05 35.5 4.4 32 3-35 12-44 (292)
442 3k5i_A Phosphoribosyl-aminoimi 78.0 2.4 8.2E-05 37.7 4.9 32 2-34 23-54 (403)
443 3orq_A N5-carboxyaminoimidazol 77.9 3.2 0.00011 36.5 5.6 32 3-35 12-43 (377)
444 1c0p_A D-amino acid oxidase; a 77.9 2.5 8.6E-05 36.4 4.9 31 3-34 6-36 (363)
445 3jyo_A Quinate/shikimate dehyd 77.8 1.3 4.6E-05 37.6 3.0 33 4-37 128-160 (283)
446 2pk3_A GDP-6-deoxy-D-LYXO-4-he 77.7 2.6 9E-05 35.5 4.9 32 3-35 12-44 (321)
447 3oc4_A Oxidoreductase, pyridin 77.7 1.7 5.8E-05 39.1 3.8 35 1-36 1-36 (452)
448 1n2s_A DTDP-4-, DTDP-glucose o 77.7 1.8 6.2E-05 36.1 3.8 29 5-35 2-31 (299)
449 1obb_A Maltase, alpha-glucosid 77.6 2.4 8.4E-05 38.9 4.8 25 1-25 1-27 (480)
450 2zbw_A Thioredoxin reductase; 77.5 2 7E-05 36.4 4.1 32 3-35 5-36 (335)
451 1eq2_A ADP-L-glycero-D-mannohe 77.5 2.4 8.1E-05 35.5 4.5 31 5-35 1-32 (310)
452 3ip1_A Alcohol dehydrogenase, 77.5 3.6 0.00012 36.5 5.9 30 4-34 215-245 (404)
453 3l9w_A Glutathione-regulated p 77.4 1.7 5.9E-05 39.0 3.7 31 4-35 5-35 (413)
454 1hye_A L-lactate/malate dehydr 77.4 2.5 8.7E-05 36.3 4.7 33 4-36 1-34 (313)
455 2dkn_A 3-alpha-hydroxysteroid 77.3 3.4 0.00012 33.4 5.3 31 4-35 2-33 (255)
456 1lqt_A FPRA; NADP+ derivative, 77.3 1.6 5.5E-05 39.6 3.6 36 1-36 1-42 (456)
457 1db3_A GDP-mannose 4,6-dehydra 77.3 2.4 8.1E-05 36.6 4.6 31 4-35 2-33 (372)
458 3d7l_A LIN1944 protein; APC893 77.1 3.1 0.00011 32.5 4.9 31 3-35 3-34 (202)
459 3cgv_A Geranylgeranyl reductas 77.0 1.5 5.2E-05 38.1 3.3 33 1-34 2-34 (397)
460 1i24_A Sulfolipid biosynthesis 77.0 2.4 8.1E-05 37.1 4.5 31 3-34 11-42 (404)
461 3c96_A Flavin-containing monoo 77.0 2 6.9E-05 37.9 4.1 31 3-34 4-35 (410)
462 3n58_A Adenosylhomocysteinase; 76.8 2.4 8.2E-05 38.6 4.5 29 4-33 248-276 (464)
463 1r6d_A TDP-glucose-4,6-dehydra 76.6 2.8 9.6E-05 35.6 4.8 31 5-35 2-38 (337)
464 3oz2_A Digeranylgeranylglycero 76.6 1.6 5.5E-05 37.7 3.3 32 1-33 2-33 (397)
465 3h9u_A Adenosylhomocysteinase; 76.6 2.5 8.6E-05 38.2 4.5 32 3-36 211-242 (436)
466 3rp8_A Flavoprotein monooxygen 76.5 2.6 8.8E-05 37.1 4.6 30 3-33 23-52 (407)
467 3nks_A Protoporphyrinogen oxid 76.5 2.5 8.6E-05 37.9 4.6 33 2-34 1-34 (477)
468 3q2o_A Phosphoribosylaminoimid 76.4 3.7 0.00013 36.1 5.6 32 3-35 14-45 (389)
469 3goh_A Alcohol dehydrogenase, 76.4 1.4 4.7E-05 37.7 2.7 30 4-34 144-173 (315)
470 3f8d_A Thioredoxin reductase ( 76.3 2.3 7.9E-05 35.6 4.1 31 3-34 15-45 (323)
471 3h8v_A Ubiquitin-like modifier 76.3 3.1 0.00011 35.6 4.8 33 3-36 36-68 (292)
472 3fpc_A NADP-dependent alcohol 76.3 4.3 0.00015 35.1 6.0 31 4-35 168-199 (352)
473 1leh_A Leucine dehydrogenase; 76.2 2.8 9.5E-05 37.0 4.7 32 3-36 173-204 (364)
474 1trb_A Thioredoxin reductase; 76.1 1.5 5.2E-05 36.9 2.9 31 2-33 4-34 (320)
475 3ihm_A Styrene monooxygenase A 75.8 2.1 7.3E-05 38.2 3.9 32 3-35 22-53 (430)
476 2bc0_A NADH oxidase; flavoprot 75.8 1.9 6.5E-05 39.3 3.6 33 3-35 35-69 (490)
477 3h28_A Sulfide-quinone reducta 75.8 2.3 7.7E-05 38.0 4.1 34 3-36 2-36 (430)
478 1v8b_A Adenosylhomocysteinase; 75.7 2.1 7.1E-05 39.3 3.8 31 3-34 257-287 (479)
479 1npy_A Hypothetical shikimate 75.7 4.3 0.00015 34.1 5.6 32 4-36 120-151 (271)
480 2wtb_A MFP2, fatty acid multif 75.7 2.3 7.9E-05 41.1 4.3 30 3-33 312-341 (725)
481 2p5y_A UDP-glucose 4-epimerase 75.6 3.1 0.00011 35.0 4.7 29 5-34 2-31 (311)
482 2i6t_A Ubiquitin-conjugating e 75.4 2.3 8E-05 36.4 3.9 35 3-37 14-48 (303)
483 1c1d_A L-phenylalanine dehydro 75.3 3.1 0.0001 36.6 4.7 32 4-37 176-207 (355)
484 2d5c_A AROE, shikimate 5-dehyd 75.3 2.5 8.5E-05 35.1 4.0 31 5-37 118-148 (263)
485 2c29_D Dihydroflavonol 4-reduc 75.0 2.6 9E-05 35.9 4.2 33 3-36 5-38 (337)
486 4ej6_A Putative zinc-binding d 75.0 2.6 8.8E-05 37.0 4.1 30 4-34 184-214 (370)
487 2c2x_A Methylenetetrahydrofola 74.7 5.6 0.00019 33.7 6.0 28 4-31 159-188 (281)
488 3i3l_A Alkylhalidase CMLS; fla 74.6 3.2 0.00011 39.0 4.9 33 1-34 21-53 (591)
489 3gwf_A Cyclohexanone monooxyge 74.4 2.4 8.1E-05 39.4 3.9 33 3-35 8-40 (540)
490 1xa0_A Putative NADPH dependen 74.4 3.1 0.00011 35.5 4.5 31 5-36 152-183 (328)
491 4dqv_A Probable peptide synthe 74.4 2.7 9.1E-05 38.2 4.2 34 3-36 73-109 (478)
492 3i6d_A Protoporphyrinogen oxid 74.3 2.6 9E-05 37.5 4.1 33 3-35 5-42 (470)
493 3lzw_A Ferredoxin--NADP reduct 74.2 2.1 7.1E-05 36.1 3.3 32 3-35 7-38 (332)
494 1z45_A GAL10 bifunctional prot 74.0 3.2 0.00011 39.6 4.8 32 3-35 11-43 (699)
495 1y56_B Sarcosine oxidase; dehy 73.9 2.5 8.6E-05 36.6 3.8 30 3-33 5-34 (382)
496 3tnl_A Shikimate dehydrogenase 73.9 1.6 5.4E-05 37.8 2.4 31 4-36 155-186 (315)
497 1gy8_A UDP-galactose 4-epimera 73.7 3.8 0.00013 35.7 5.0 31 4-35 3-35 (397)
498 1ooe_A Dihydropteridine reduct 73.7 5.2 0.00018 32.2 5.5 33 1-34 1-34 (236)
499 3ab1_A Ferredoxin--NADP reduct 73.6 3 0.0001 35.8 4.2 31 3-34 14-44 (360)
500 3vrd_B FCCB subunit, flavocyto 73.5 2.7 9.1E-05 36.9 3.9 31 4-34 3-34 (401)
No 1
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=4.8e-64 Score=441.14 Aligned_cols=264 Identities=88% Similarity=1.351 Sum_probs=250.3
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCccccc-ceeeeCCceEEECCEEEEEE
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHH-ELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~-~v~~~~~~~l~~~g~~i~~~ 79 (265)
|+++||||+|||+|||.++|++.+++++|+++|+|...+.++++|||+|||+||+|+ + .+..++++.|.++|+.+.++
T Consensus 1 m~~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~~v~~~~~~~l~i~Gk~I~v~ 79 (337)
T 3v1y_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWK-HSDIKIKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCC-SSCEEEEETTEEEETTEEEEEE
T ss_pred CCceEEEEECCChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCccc-CceEEEcCCcEEEECCEEEEEE
Confidence 778999999999999999999999999999999998779999999999999999999 7 77776554699999999999
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCCCceEEeeeCcccccCCCCeEEcCCccchhh
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCL 159 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~~~~~v~gvn~~~i~~~~~~V~~p~C~~ta~ 159 (265)
+..||++++|.+.++|+||+|||.+++++.++.++++|+|+|+||++++|+|++|||+|++.++.+.++||||+|+|+++
T Consensus 80 ~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~L 159 (337)
T 3v1y_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCL 159 (337)
T ss_dssp CCSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred EecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeECCCCCHHHcCCCCcEEecCchhhhhH
Confidence 88899999998889999999999999999999999999999999999888999999999999986678999999999999
Q ss_pred hhHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEEeee
Q 024629 160 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPT 239 (265)
Q Consensus 160 ~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~vP~ 239 (265)
+++|+||+++|||+++.+||+|++||+|+.+|++++++|+++|++++|++|+.+|.++++.+++||++++++.+++|||+
T Consensus 160 ap~lkvL~d~fGI~~g~mTTvha~T~~q~~~Dg~~~kd~r~~r~~a~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv 239 (337)
T 3v1y_O 160 APLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPT 239 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCTTCGGGGSBGGGCCEEEECCHHHHHHHHSGGGTTSEEEEEEECSC
T ss_pred HHHHHHHHHhcCeEEEEEeeeeeccchhhhccCCccccccccccccceeecCCCChHHHHHHhccccCCcEEEEEEEcCC
Confidence 99999999999999999999999999999999988789999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 240 VDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 240 ~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
++||+.+++++|+++++.||++++|+
T Consensus 240 ~~~s~~dlt~~lek~~t~eei~~~lk 265 (337)
T 3v1y_O 240 VDVSVVDLTVRIEKAASYDAIKSAIK 265 (337)
T ss_dssp SSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CCcEEEEEEEEECCCCcHHHHHHHHH
Confidence 99999999999999999999999874
No 2
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=1.3e-63 Score=437.63 Aligned_cols=261 Identities=66% Similarity=1.074 Sum_probs=249.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
|+||||+|||+||+.++|++.+++++|+++|+|+..+.++++|||+|||+||+|+ +.+..+++ .|.++|+.+.+++..
T Consensus 1 ~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~ 78 (332)
T 3pym_A 1 MVRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYA-GEVSHDDK-HIIVDGKKIATYQER 78 (332)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEECSS-EEEETTEEEEEECCS
T ss_pred CeEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEEeec
Confidence 4799999999999999999999999999999998779999999999999999999 88877655 799999999999888
Q ss_pred CCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCCCceEEeeeCcccccCCCCeEEcCCccchhhhhH
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLAPL 162 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~~~~~v~gvn~~~i~~~~~~V~~p~C~~ta~~l~ 162 (265)
||++++|.+.++|+||+|||.+++++.++.++++|+|+|+||++++|+|++|||+|++.++++.++||||+|+|++++++
T Consensus 79 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~ 158 (332)
T 3pym_A 79 DPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPL 158 (332)
T ss_dssp SGGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHH
T ss_pred ccccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCCCCeEeeccchhhcCccccEEecCcchhhhhHHH
Confidence 99999998889999999999999999999999999999999999878899999999999986678999999999999999
Q ss_pred HHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEEeeecce
Q 024629 163 AKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 242 (265)
Q Consensus 163 L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~vP~~~G 242 (265)
++||+++|||+++.+||+|++|++|+.+|++++++|+++|++++|++|+.+|.++++.+++||++++++.+++|||+++|
T Consensus 159 lkvL~d~fGI~~g~mTTvha~T~~Q~~vDg~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~ 238 (332)
T 3pym_A 159 AKVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDV 238 (332)
T ss_dssp HHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCTGGGSCGGGCCEEEECSHHHHHHHHSGGGTTSEEEEEEEESCSSC
T ss_pred HHHHHHhcCeEEEEEEEEeeccccchhccCCCcccCccccchhhcccCCCCChHHHHHHhhhhhcCCEEEEEEEcCCCCc
Confidence 99999999999999999999999999999988889999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEeCCCCCHHHHHHHhC
Q 024629 243 SVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 243 ~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
|+.+++++|+++++.||++++|+
T Consensus 239 s~~dlt~~lek~~t~eei~~~lk 261 (332)
T 3pym_A 239 SVVDLTVKLNKETTYDEIKKVVK 261 (332)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHH
T ss_pred EeeEEEEEECCcCCHHHHHHHHH
Confidence 99999999999999999999874
No 3
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=1e-62 Score=432.31 Aligned_cols=260 Identities=49% Similarity=0.764 Sum_probs=246.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
++||||+|||+|||.++|++.+++++|+++|+|. .+.++++|||+|||+||+|+ +.+..+++ .|.++|+.+.+++..
T Consensus 4 ~~kv~INGfGrIGr~v~R~~~~~~~~~ivaind~-~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~~e~ 80 (338)
T 3lvf_P 4 AVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL-TDDDMLAHLLKYDTMQGRFT-GEVEVVDG-GFRVNGKEVKSFSEP 80 (338)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS-SCHHHHHHHHHCCTTTCCCS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHHCCCceEEEEecC-CCHHHHHHHhccCCCCCCcC-CeEEEcCC-EEEECCEEEEEEEec
Confidence 4899999999999999999999999999999994 68999999999999999999 88887765 799999999999888
Q ss_pred CCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCC-CCceEEeeeCcccccCCCCeEEcCCccchhhhh
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKPELNIVSNASCTTNCLAP 161 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~-~~~~~v~gvn~~~i~~~~~~V~~p~C~~ta~~l 161 (265)
||++++|.+.++|+||+|||.+++++.++.++++|+|+|+||++++ ++|++|||+|++.++++.++||||+|+|+++++
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~IISNasCTTn~Lap 160 (338)
T 3lvf_P 81 DASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAP 160 (338)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCCSCCSEEECCCHHHHHHHH
T ss_pred ccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCCCCCEEeccCCHHHcCccCCeEecCchhhhhhHH
Confidence 9999999888999999999999999999999999999999999865 689999999999998667899999999999999
Q ss_pred HHHHHHHhcCeeEEEEEEEeeccccccccCCCCCc-cccCccccccccccccCChhhhHhhhcccCCCceeEEEEEeeec
Q 024629 162 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSK-DWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240 (265)
Q Consensus 162 ~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~-~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~vP~~ 240 (265)
+|+||+++|||+++.+||+|++||+|+.+|+++.+ +|+++|++++|++|+.+|.++++.+++||++++++.+++|||++
T Consensus 161 ~lkvL~d~fGI~~g~mTTvha~T~~q~~~D~~~~k~d~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~ 240 (338)
T 3lvf_P 161 VAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVA 240 (338)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCCTTTTSCGGGCCEEEECSTTTTGGGTCGGGTTSEEEEEEEESCS
T ss_pred HHHHHHHhcCEEEEEEeeeccccchhhhhcCCccccccccchhhhceEEeCCCchHHHHhhhchhhcCcEEEEEEEcCCC
Confidence 99999999999999999999999999999998766 89999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEEeCC-CCCHHHHHHHhC
Q 024629 241 DVSVVDLTVRLEK-DASYDEIKAAIK 265 (265)
Q Consensus 241 ~G~~~~~~~~l~~-~~~~~~v~~~~~ 265 (265)
+||+.+++++|++ +++.||++++|+
T Consensus 241 ~~s~~dlt~~lek~~~t~eei~~~lk 266 (338)
T 3lvf_P 241 TGSLTELTVVLEKQDVTVEQVNEAMK 266 (338)
T ss_dssp SCEEEEEEEEESSSSCCHHHHHHHHH
T ss_pred ceEEEEEEEEEccCCCCHHHHHHHHH
Confidence 9999999999999 999999999874
No 4
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=3.7e-62 Score=428.88 Aligned_cols=260 Identities=49% Similarity=0.802 Sum_probs=245.2
Q ss_pred CccEEEEEccChhHHHHHHHHHcC--CCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 2 GKVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~--p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
|++||||+|||+|||.++|++.++ +++|+++|+|. .+.++++|||+|||+||+|+ +.+..+++ .|.++|+.+.++
T Consensus 1 m~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~-~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~ 77 (335)
T 3doc_A 1 MAVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL-GPVETNAHLLRYDSVHGRFP-KEVEVAGD-TIDVGYGPIKVH 77 (335)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCCEECSS-EEESSSSEEEEE
T ss_pred CCEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC-CCHHHHHHHhcccCCCCCCC-CeEEEecC-EEEECCEEEEEE
Confidence 258999999999999999999887 78999999998 58999999999999999999 88877655 799999999999
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCC-CceEEeeeCcccccCCCCeEEcCCccchh
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNC 158 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~-~~~~v~gvn~~~i~~~~~~V~~p~C~~ta 158 (265)
+..||++++|.+.++|+||+|||.+++++.++.++++|+|+|+||+++.| +|++|||+|++.++++.++||||+|+|++
T Consensus 78 ~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~~p~vV~gVN~~~~~~~~~IISNasCTTn~ 157 (335)
T 3doc_A 78 AVRNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNC 157 (335)
T ss_dssp CCSSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTTCSEECCTTTTGGGCCTTCCEEECCCHHHHH
T ss_pred eecccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCCCCCEEecccCHHHhCccCCeEecCchhhhh
Confidence 88899999998889999999999999999999999999999999998655 79999999999998667899999999999
Q ss_pred hhhHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEEee
Q 024629 159 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 238 (265)
Q Consensus 159 ~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~vP 238 (265)
++++++||+++|||+++.+||+|++||+|+.+|++ +++|+++|++++|++|+.+|.++++.+++||++++++.+++|||
T Consensus 158 Lap~lk~L~d~fGI~~g~mTTvha~T~~q~~~D~p-~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVP 236 (335)
T 3doc_A 158 LAPVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTM-HKDLYRARAAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRVP 236 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCC-CSSTTTTSCTTSSCEEEECCHHHHHHHHSGGGTTCEEEEEEEES
T ss_pred hHHhHHHHHHHcCEEEEEEEeeeeccchhhhhcCc-cccccccccCcceEecCCCchHHHHHHhccccCCCEEEEEEEec
Confidence 99999999999999999999999999999999986 47999999999999999999999999999999999999999999
Q ss_pred ecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 239 TVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 239 ~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
+++||+.+++++|+++++.||++++|+
T Consensus 237 v~~~s~~dlt~~lek~~t~eei~~~lk 263 (335)
T 3doc_A 237 TPNVSVVDLTFIAKRETTVEEVNNAIR 263 (335)
T ss_dssp CSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cccccceEEEEEECCCCCHHHHHHHHH
Confidence 999999999999999999999999874
No 5
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=2.8e-62 Score=432.10 Aligned_cols=262 Identities=57% Similarity=0.940 Sum_probs=246.5
Q ss_pred ccEEEEEccChhHHHHHHH----HHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeee-------CCceEEE
Q 024629 3 KVKIGINGFGRIGRLVARV----ILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVK-------DDKTLLF 71 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~----L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~-------~~~~l~~ 71 (265)
++||||+|||+|||.++|+ +.+++++|+++|+|+..+.++++|||+|||+||+|+ +.+... .++.|.+
T Consensus 2 ~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~-~~v~~~~~~~~~~~~~~l~i 80 (359)
T 3ids_C 2 PIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFK-YEVTTTKSSPSVAKDDTLVV 80 (359)
T ss_dssp CEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECS-SCEEEECSCTTSSSCCEEEE
T ss_pred ceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEe-eEEEecccccccCCCCEEEE
Confidence 5899999999999999999 677889999999997779999999999999999999 888761 4458999
Q ss_pred CCEEEEEEe-cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCC-CCceEEeeeCcccccC-CCCe
Q 024629 72 GEKPVTVFG-VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKP-ELNI 148 (265)
Q Consensus 72 ~g~~i~~~~-~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~-~~~~~v~gvn~~~i~~-~~~~ 148 (265)
+|+.+.+++ ..||++++|.+.++|+||+|||.+++++.++.++++|+|+|+||++++ ++|++|||+|++.+++ +.++
T Consensus 81 nGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~I 160 (359)
T 3ids_C 81 NGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHV 160 (359)
T ss_dssp TTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCCTTTCSE
T ss_pred CCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcCCCCCCE
Confidence 999999987 789999999888999999999999999999999999999999999965 6899999999999986 5789
Q ss_pred EEcCCccchhhhhHHHHH-HHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCC
Q 024629 149 VSNASCTTNCLAPLAKVI-HDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALN 227 (265)
Q Consensus 149 V~~p~C~~ta~~l~L~pL-~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~ 227 (265)
||||+|+|++++++++|| +++|||+++.+||+|++||+|+.+|++++++|+++|++++|++|+.+|.++++.+++||++
T Consensus 161 ISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~~vD~~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~ 240 (359)
T 3ids_C 161 VSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTQ 240 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSBSSSCCCTTCTGGGSBGGGCCEEEECSHHHHHHHHSGGGT
T ss_pred EECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhhhhcCCccccccccccCcceeEccCCchHHHHhhhchhhc
Confidence 999999999999999999 9999999999999999999999999987789999999999999999999999999999999
Q ss_pred CceeEEEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 228 GKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 228 ~~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
|+++.+++|||+++||+.+++++|+++++.||++++|+
T Consensus 241 gkltg~avRVPv~~vs~~dlt~~lek~~t~eei~~~lk 278 (359)
T 3ids_C 241 GKLTGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALK 278 (359)
T ss_dssp TSEEEEEEEESCSSCEEEEEEEECSSCCCHHHHHHHHH
T ss_pred CceEEEEEEcCCCCcEEEEEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999874
No 6
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=3.8e-62 Score=429.23 Aligned_cols=259 Identities=48% Similarity=0.827 Sum_probs=234.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
|+||||+|||+|||.++|++.+++++|+++|+|+ .+.++++|||+|||+||+|+ +.+..+++ .|.++|+.+.+++..
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~-~d~~~~a~llkyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~~e~ 80 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKESAFEIVAINAS-YPSETLAHLIKYDTVHGKFD-GTVEAFED-HLLVDGKMIRLLNNR 80 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEECSS-EEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC-CCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEeecC
Confidence 5899999999999999999999999999999998 58999999999999999999 88877655 799999999999888
Q ss_pred CCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCC-CCceEEeeeCcccccC-CCCeEEcCCccchhhh
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKP-ELNIVSNASCTTNCLA 160 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~-~~~~~v~gvn~~~i~~-~~~~V~~p~C~~ta~~ 160 (265)
||++++|.+.++|+||+|||.+++++.++.++++|+|+|+||++++ ++|++|||+|++.+++ +.++||||+|+|++++
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~La 160 (345)
T 4dib_A 81 DPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLA 160 (345)
T ss_dssp CGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCSEEECCCHHHHHHH
T ss_pred ChhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHcCcccCeEEECCchhhhhhH
Confidence 9999999888999999999999999999999999999999999865 5899999999999985 4689999999999999
Q ss_pred hHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEEeeec
Q 024629 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240 (265)
Q Consensus 161 l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~vP~~ 240 (265)
++|+||+++|||+++.+||+|++|++|+.+|+++ ++|+++|++++|++|+.+|.++++.+++||++|+++.+++|||++
T Consensus 161 p~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVPv~ 239 (345)
T 4dib_A 161 PVVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPH-KDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTP 239 (345)
T ss_dssp HHHHHHHHHHCEEEEEEEEEECC--------------CCTTSCTTTCCEEECCTHHHHHHHHCGGGTTTEEEEEEECCCS
T ss_pred HHHHHHHHhcCeEEEEEEeeeeccCCceeccccc-cccccchhhhhceecCCCchHHHHhhhccccCCcEEEEEEEccCc
Confidence 9999999999999999999999999999999975 799999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 241 DVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 241 ~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
+||+.+++++|+++++.||++++|+
T Consensus 240 ~~s~~dlt~~lek~~t~eei~~~lk 264 (345)
T 4dib_A 240 NVSLVDLVVDVKRDVTVEAINDAFK 264 (345)
T ss_dssp SEEEEEEEEEESSCCCHHHHHHHHH
T ss_pred ccEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999874
No 7
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=8.6e-62 Score=428.22 Aligned_cols=260 Identities=64% Similarity=1.070 Sum_probs=248.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
|+||||+|+|+||+.++|++.+++ +|+++|+|+..+.++++|||+|||+||+|+ +.+..+++ .|.++|+.+.+++..
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~-veivainDp~~d~~~~a~l~~yDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~ 83 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GSVEFRNG-QLVVDNHEISVYQCK 83 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred eeEEEEECCChHHHHHHHHHHhCC-CEEEEEeCCCCChhHhcccccccCCCCCCC-CcEEEcCC-EEEECCEEEEEEecC
Confidence 689999999999999999999887 999999998779999999999999999999 88887655 799999999999888
Q ss_pred CCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCCCceEEeeeCcccccC-CCCeEEcCCccchhhhh
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~~~~~v~gvn~~~i~~-~~~~V~~p~C~~ta~~l 161 (265)
||++++|.+.++|+||+|||.+++++.++.++++|+|++|||++++|+|++|||+|++.+++ +.++||||+|+|++++|
T Consensus 84 dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~d~plvV~gVN~~~~~~~~~~IISNasCTTn~Lap 163 (346)
T 3h9e_O 84 EPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAP 163 (346)
T ss_dssp SGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHH
T ss_pred ChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeeCcccCHHHcCcccCCEEECCcchhhhHHH
Confidence 99999998889999999999999999999999999999999999888999999999999985 57899999999999999
Q ss_pred HHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEEeeecc
Q 024629 162 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVD 241 (265)
Q Consensus 162 ~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~vP~~~ 241 (265)
+++||+++|||+++.+||+|++||+|+.+|++++++|+++|++++|++|+.+|.+++..+++||++|+++.+++|||+++
T Consensus 164 ~lkvL~d~fGI~~g~mTTvhA~T~tQ~~~Dg~~~kd~r~~r~aa~NiIP~~tGaakavgkViPeL~gkltg~avRVPv~~ 243 (346)
T 3h9e_O 164 LAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPD 243 (346)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTSGGGGSBTTTCCEEECCHHHHHHHHHSGGGTTTEEEEEEEESCSS
T ss_pred HHHHHHHHhCeeEEEEeeeeeccCccccccCCCCCCccccccceeeeecccCchHHhhheechhhcCcEEEEEEEccccc
Confidence 99999999999999999999999999999998888999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 242 VSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 242 G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
||+.+++++++++++.||++++|+
T Consensus 244 ~s~~dlt~~lek~~t~eei~~~lk 267 (346)
T 3h9e_O 244 VSVVDLTCRLAQPAPYSAIKEAVK 267 (346)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHH
T ss_pred ceeEEEEEEECCcCCHHHHHHHHH
Confidence 999999999999999999999874
No 8
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=9.1e-61 Score=423.05 Aligned_cols=263 Identities=63% Similarity=1.014 Sum_probs=244.6
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
|.++||||+|+|+||+.++|++.+||++|+++|+++..+.++++||++|||+||+|. +.+..+++ .|.++|+.+.+++
T Consensus 9 ~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~-~~v~~~~~-~l~v~Gk~i~v~~ 86 (345)
T 2b4r_O 9 MAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFP-CEVTHADG-FLLIGEKKVSVFA 86 (345)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEESSCEEEEEC
T ss_pred hhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCC-CCEEEcCC-EEEECCEEEEEEE
Confidence 667999999999999999999999999999999996668999999999999999998 77776644 7999999999987
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCC-CceEEeeeCcccccCCCCeEEcCCccchhh
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCL 159 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~-~~~~v~gvn~~~i~~~~~~V~~p~C~~ta~ 159 (265)
..||++++|.+.++|+||+|||.+.+++.++.++++|+|++|||+++++ +|++|||+|++.++...++|+||+|+|+++
T Consensus 87 ~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~dvplvV~gVN~~~~~~~~~IISNasCTTn~L 166 (345)
T 2b4r_O 87 EKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCL 166 (345)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred cCCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHhCCCCCEEECCchHHHHH
Confidence 6789999997779999999999999999999999999999999988654 799999999999986468999999999999
Q ss_pred hhHHHHHHHhcCeeEEEEEEEeeccccccccCCCC--CccccCccccccccccccCChhhhHhhhcccCCCceeEEEEEe
Q 024629 160 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS--SKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRV 237 (265)
Q Consensus 160 ~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~--~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~v 237 (265)
+++|+||+++|||+++.+||+|++||+|+.+|++. +++++++|++++|++|+.+|.++++.+++|+++|+++.+++||
T Consensus 167 ap~lk~L~d~fGI~~~~mTTvhA~T~~q~~~d~~~~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRV 246 (345)
T 2b4r_O 167 APLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRV 246 (345)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECCCTTSCSSSCCCGGGCCGGGGSCTTTCCEEEECCHHHHHHHHSGGGTTTEEEEEEEC
T ss_pred HHHHHHHHHhcCeeEEEEEEeehhhchhhhhcccccccCCCccccchhhccCcCCCchHHHHHHhhhhcCCcEEEEEEEe
Confidence 99999999999999999999999999999999875 3789999999999999999999999999999999999999999
Q ss_pred eecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 238 PTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 238 P~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
|+++||+.+++++|+++++.||++++|+
T Consensus 247 Pv~~gs~~dltv~lek~~t~eei~~~lk 274 (345)
T 2b4r_O 247 PIGTVSVVDLVCRLQKPAKYEEVALEIK 274 (345)
T ss_dssp SCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cccceEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999999874
No 9
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=8e-61 Score=427.24 Aligned_cols=263 Identities=69% Similarity=1.116 Sum_probs=242.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
|||+||||+|+||+|++++|+|.+||++|+++|+++..+.+.++++++||++||+|. +.+..+.+ .+.++|+.+.++.
T Consensus 1 mM~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~-~~~~~~~~-~l~v~g~~i~v~~ 78 (335)
T 1u8f_O 1 MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFH-GTVKAENG-KLVINGNPITIFQ 78 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEEC
T ss_pred CCceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCC-CceEEcCC-eEEECCeEEEEEe
Confidence 777999999999999999999999999999999996347888999999999999998 76655444 6888999998887
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCCCceEEeeeCcccccCCCCeEEcCCccchhhh
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLA 160 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~~~~~v~gvn~~~i~~~~~~V~~p~C~~ta~~ 160 (265)
..|+++++|.+.++|+||+|||++.+++.++.++++|+|+|++|+++++.|++|||+|+++++.++++||||||+||+++
T Consensus 79 ~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~~~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l~ 158 (335)
T 1u8f_O 79 ERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLA 158 (335)
T ss_dssp CSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSSSCBCCTTTTGGGCCTTCSEEECCCHHHHHHH
T ss_pred cCCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCCCCCeEEeccCHHHhCCCCCEEECCChHHHHHH
Confidence 67899999977789999999999999999999999999999999997778999999999999854789999999999999
Q ss_pred hHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEEeeec
Q 024629 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240 (265)
Q Consensus 161 l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~vP~~ 240 (265)
|+|+||+++|+|+++.++++|++||+|+.+|++..++++++|.+++|++|+.+|+++|+.+++||++++++++++|||++
T Consensus 159 ~~lkpL~~~~gI~~~~~tt~~a~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~ 238 (335)
T 1u8f_O 159 PLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTA 238 (335)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEEESCS
T ss_pred HHHHHHHHhCCcceeEEEEEeccccCccccccccccccccchhhhcCceeccCChhHHHHHHHHHhCCcEEEEEEEeccC
Confidence 99999999999999999999999999999998754689999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 241 DVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 241 ~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
|||+.+++++++++++.|||+++|+
T Consensus 239 ~g~~~~l~~~l~~~~t~eei~~~~~ 263 (335)
T 1u8f_O 239 NVSVVDLTCRLEKPAKYDDIKKVVK 263 (335)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CEEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999884
No 10
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=1e-60 Score=424.63 Aligned_cols=259 Identities=64% Similarity=1.033 Sum_probs=241.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
|+||||+|+||+|++++|+|.+||++|+++|++.. +.+.++||++||++||+|. +.+..+++ .|.++|+.+.+++..
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~~-~~~~~a~l~~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~~ 77 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLL-DADYMAYMLKYDSTHGRFD-GTVEVKDG-HLIVNGKKIRVTAER 77 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSS-CHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCCC-ChhHHhHhhcccccCCCCC-CeEEEcCC-EEEECCEEEEEEEcC
Confidence 47999999999999999999999999999999964 7788999999999999998 77655444 688999999998777
Q ss_pred CCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCC-CCceEEeeeCcccccCCCCeEEcCCccchhhhh
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKPELNIVSNASCTTNCLAP 161 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~-~~~~~v~gvn~~~i~~~~~~V~~p~C~~ta~~l 161 (265)
|+++++|.+.++|+||+|||++.+++.++.++++|+|+|++|++.+ +.|++|||+|+++|+ ++++|||||||||+++|
T Consensus 78 dp~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~~~p~~V~GvN~~~~~-~~~iIsNpsCtt~~lap 156 (330)
T 1gad_O 78 DPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYA-GQDIVSNASCTTNCLAP 156 (330)
T ss_dssp SGGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCC-SCSEEECCCHHHHHHHH
T ss_pred ChhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCCCCCeEeecCCHHHhC-CCCEEEcCChHHHHHHH
Confidence 8999999777899999999999999999999999999999999864 478999999999998 58999999999999999
Q ss_pred HHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEEeeecc
Q 024629 162 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVD 241 (265)
Q Consensus 162 ~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~vP~~~ 241 (265)
+|+||+++|+|+++.++++|++||+|..+|++.+++++++|.+++|++|+.+|+++|+.|++||++++++++|+|||++|
T Consensus 157 ~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~ 236 (330)
T 1gad_O 157 LAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPN 236 (330)
T ss_dssp HHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCSSCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEECSCSS
T ss_pred HHHHHHHhcCeeEEEEEEEEecccccccccccccCCCccccchhhCeEEcCCCcchhHHHHHHHhcCcEEEEEEEecccc
Confidence 99999999999999999999999999999998657899999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 242 VSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 242 G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
||+.+++++++++++.|||+++|+
T Consensus 237 g~~~~l~~~l~k~~t~eei~~~~k 260 (330)
T 1gad_O 237 VSVVDLTVRLEKAATYEQIKAAVK 260 (330)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHH
T ss_pred EEEEEEEEEECCCCCHHHHHHHHH
Confidence 999999999999999999999884
No 11
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=5.6e-60 Score=420.28 Aligned_cols=259 Identities=55% Similarity=0.877 Sum_probs=239.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
|+||||+|+||+|++++|+|.+||++|+++|++. .+.+.++|+++||++||+|. +.+..+.+ .|.++|+.+.+++..
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~~~veivain~~-~~~~~~~~ll~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~ 77 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL-TDANTLAHLLKYDSVHGRLD-AEVSVNGN-NLVVNGKEIIVKAER 77 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC-CCHHHHHHHhccCCcCCCcC-ceEEEccC-cEEECCEEEEEEecC
Confidence 4799999999999999999999999999999996 47889999999999999998 77665544 688899988887667
Q ss_pred CCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCC-CceEEeeeCcccccC-CCCeEEcCCccchhhh
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKP-ELNIVSNASCTTNCLA 160 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~-~~~~v~gvn~~~i~~-~~~~V~~p~C~~ta~~ 160 (265)
|+++++|.+.++|+||+|||++.+++.++.++++|+|++|||++.++ .|++|||+|+++|+. .+++||||||+||+++
T Consensus 78 dp~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~la 157 (334)
T 3cmc_O 78 DPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLA 157 (334)
T ss_dssp SGGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHH
T ss_pred ChhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCccCCCEeccccCHHHhCccCCeEEECCChHHHHHH
Confidence 89999997678999999999999999999999999999999877545 689999999999984 2689999999999999
Q ss_pred hHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEEeeec
Q 024629 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240 (265)
Q Consensus 161 l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~vP~~ 240 (265)
|+|+||+++|||+++.++|+|++||+|+.+|++ +++++++|.+++|++|+.+|+++|+.|++|+++++++++|+|||++
T Consensus 158 p~lkpL~~~~gI~~~~mtTvha~Sg~q~~~d~~-~~~~r~~r~~a~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP~~ 236 (334)
T 3cmc_O 158 PFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLP-HKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTP 236 (334)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCC-CSSTTTTSBTTTCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHhcCceeeeEEEEEeccchhhhcccc-ccccccchhhhhCEEeeccCcccchhhhChhhcCcEEEEEEEECCC
Confidence 999999999999999999999999999999986 5789999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 241 DVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 241 ~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
|||+.+++++++++++.||++++|+
T Consensus 237 ~gs~~~l~~~l~k~~t~eei~~~lk 261 (334)
T 3cmc_O 237 NVSVVDLVAELEKEVTVEEVNAALK 261 (334)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CEEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999874
No 12
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=7.5e-60 Score=416.60 Aligned_cols=259 Identities=44% Similarity=0.745 Sum_probs=242.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcC---CCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQR---DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~---p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
|+||||+|||++|+.++|+|.++ |++|+++|++. .+.++++|||+||++||+|. +.+..+++ .|.++|+.+.++
T Consensus 1 ~ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~-~~~~~~a~ll~ydS~hg~f~-~~v~~~~~-~l~v~g~~i~v~ 77 (335)
T 1obf_O 1 TIRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL-GDPKTNAHLTRYDTAHGKFP-GTVSVNGS-YMVVNGDKIRVD 77 (335)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC-CCHHHHHHHhccCCcCCCCC-CCEEEeCC-EEEECCEEEEEE
Confidence 37999999999999999999998 89999999996 58899999999999999999 77776644 799999999998
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCC-CCc-eEEeeeCcccccCCCCeEEcCCccch
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAP-MFVVGVNENEYKPELNIVSNASCTTN 157 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~-~~~-~~v~gvn~~~i~~~~~~V~~p~C~~t 157 (265)
+..||++++|.+.++|+||+|||.+.+++.++.++++|+|+++||++.+ ++| ++|||+|++.++...++||||+|+|+
T Consensus 78 ~~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~dvp~~vV~gVN~~~~~~~~~IISNasCTTn 157 (335)
T 1obf_O 78 ANRNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASCTTN 157 (335)
T ss_dssp CCSCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHH
T ss_pred EcCCcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccCCCCceEEccCCHHHhCcCccEEeCCcHHHH
Confidence 7778999999878999999999999999999999999999999998865 688 99999999999854689999999999
Q ss_pred hhhhHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEEe
Q 024629 158 CLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRV 237 (265)
Q Consensus 158 a~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~v 237 (265)
+++++|+||+++|||+++.+||+|++||+|+.+|++ +++++++|++++|++|+.+|.++++.+++|+++|+++.+++||
T Consensus 158 ~Lap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~~-~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRV 236 (335)
T 1obf_O 158 CLAPLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVY-HEDLRRARSATMSMIPTKTGAAAAVGDVLPELDGKLNGYAIRV 236 (335)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCC-CSSTTTTSCTTTCCEEEECCHHHHHHHHCGGGTTSEEEEEEEE
T ss_pred HHHHHHHHHHHhcCeeEEEEEEEchhhhhhhhhccc-ccccccccchhhccccCCCcchHhHhhhccccCCceEEEEEEe
Confidence 999999999999999999999999999999999987 5789999999999999999999999999999999999999999
Q ss_pred eecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 238 PTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 238 P~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
|+++||+.+++++|+++++.||++++|+
T Consensus 237 Pv~~~s~~dl~v~lek~~t~eei~~~lk 264 (335)
T 1obf_O 237 PTINVSIVDLSFVAKRNTTVEEVNGILK 264 (335)
T ss_dssp SCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred eccceEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999999874
No 13
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=3.9e-60 Score=419.01 Aligned_cols=259 Identities=49% Similarity=0.869 Sum_probs=242.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
++||||+|||++|+.++|+|.++|++|+++|++. .+.++++||++||++||+|. +.+..++ +.|.++|+.+.+++..
T Consensus 2 ~ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~-~~~~~~a~ll~yDs~hG~~~-~~v~~~~-~~l~v~Gk~i~v~~~~ 78 (342)
T 2ep7_A 2 AIKVGINGFGRIGRSFFRASWGREEIEIVAINDL-TDAKHLAHLLKYDSVHGIFK-GSVEAKD-DSIVVDGKEIKVFAQK 78 (342)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEECS-SEEEETTEEEEEECCS
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC-CChHHHhhhhhcccccccCC-CcEEEcC-CEEEECCEEEEEEEcC
Confidence 4799999999999999999999999999999995 48899999999999999998 7777664 4799999999998777
Q ss_pred CCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCCCc-eEEeeeCcccccC-CCCeEEcCCccchhhh
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAP-MFVVGVNENEYKP-ELNIVSNASCTTNCLA 160 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~~~-~~v~gvn~~~i~~-~~~~V~~p~C~~ta~~ 160 (265)
||++++|.+.++|+||+|||.+++++.++.++++|+|+|+||++++++| ++|||+|++.++. ..++||||+|+|++++
T Consensus 79 dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~dvp~~vV~gVN~~~~~~~~~~IISNasCTTn~La 158 (342)
T 2ep7_A 79 DPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLA 158 (342)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHH
T ss_pred ChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCCCCCceEEcCcCHHHhcccCCeEEECCChHHHHHH
Confidence 8999999777999999999999999999999999999999999987889 9999999999985 4689999999999999
Q ss_pred hHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEEeeec
Q 024629 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240 (265)
Q Consensus 161 l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~vP~~ 240 (265)
++|+||+++|||+++.+||+|++||+|..+|++ +++++.+|++++|++|+.+|.++++.+++|+++|+++.+++|||++
T Consensus 159 p~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~p-~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~ 237 (342)
T 2ep7_A 159 PCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLP-HKDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVP 237 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCC-CSSTTTTSBGGGCCEEECCCTTGGGGGTSGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHHcCeeEEEEEEEeecccchhhhcCC-cchhhhhhhHhhCccCCCCChHHHHHHhhhccCCCEEEEEEEeccc
Confidence 999999999999999999999999999999986 6799999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEEeCC-CCCHHHHHHHhC
Q 024629 241 DVSVVDLTVRLEK-DASYDEIKAAIK 265 (265)
Q Consensus 241 ~G~~~~~~~~l~~-~~~~~~v~~~~~ 265 (265)
+||+.+++++|++ +++.||++++|+
T Consensus 238 ~~s~~dltv~lek~~~t~eei~~~lk 263 (342)
T 2ep7_A 238 DGSLIDLTVVVNKAPSSVEEVNEKFR 263 (342)
T ss_dssp SCEEEEEEEEESSCCSCHHHHHHHHH
T ss_pred ceEEEEEEEEEcCCCCCHHHHHHHHH
Confidence 9999999999999 999999999874
No 14
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=2.7e-60 Score=419.04 Aligned_cols=258 Identities=47% Similarity=0.827 Sum_probs=242.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
++||||+|||++|+.++|+|.++ ++++++|++. .+.++++|||+|||+||+|. +.++.+++ .|.++|+.+.+++..
T Consensus 21 ~~kVaInGfGrIGr~vlr~l~e~-~~~ivaIndl-~d~~~~a~llkydS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~~~ 96 (356)
T 3hja_A 21 SMKLAINGFGRIGRNVFKIAFER-GIDIVAINDL-TDPKTLAHLLKYDSTFGVYN-KKVESRDG-AIVVDGREIKIIAER 96 (356)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-TCEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC-CCHHHhhhhhccccCCCCCC-CCEEEcCC-EEEECCEEEEEEEcC
Confidence 58999999999999999999998 7999999998 48999999999999999999 87776554 799999999999888
Q ss_pred CCCCCCccccCccEEEEecCCccc----HHHHHHHHh-CCCcEEEEcCCCCC-CceEEeeeCcccccCCCCeEEcCCccc
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLK-GGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTT 156 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~----~~~~~~~~~-~g~~~vviS~~~~~-~~~~v~gvn~~~i~~~~~~V~~p~C~~ 156 (265)
||++++|.+.++|+||+|||.+++ ++.++.+++ +|+|+||||+++.| +|++|||+|++.++++.++||||+|+|
T Consensus 97 dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~~~~~IISNaSCTT 176 (356)
T 3hja_A 97 DPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTT 176 (356)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSSCCEECCTTTSGGGCCTTCCEEECCCHHH
T ss_pred ChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCCCCCEEeccCCHHHcCcCccEEECCccch
Confidence 999999988899999999999999 999999999 99999999998655 799999999999986568999999999
Q ss_pred hhhhhHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEE
Q 024629 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFR 236 (265)
Q Consensus 157 ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~ 236 (265)
++++++|+||+++|||+++.+||+|++||+|+.+|+++ ++|+++|++++|++|+.+|.++++.+++||++++++.+++|
T Consensus 177 n~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avR 255 (356)
T 3hja_A 177 NCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPH-SDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMR 255 (356)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTSCEEEECCTTTTHHHHCGGGTTTEEEEEEE
T ss_pred hhhhHhHHHHHHhcCeEEEEEEEEEecccccccccCcc-cccccccccccEEEcCCCchHHHHHHhccccCCcEEEEEEE
Confidence 99999999999999999999999999999999999975 79999999999999999999999999999999999999999
Q ss_pred eeecceEEEEEEEEe-CCCCCHHHHHHHhC
Q 024629 237 VPTVDVSVVDLTVRL-EKDASYDEIKAAIK 265 (265)
Q Consensus 237 vP~~~G~~~~~~~~l-~~~~~~~~v~~~~~ 265 (265)
||+++||+.+++++| +++++.||++++|+
T Consensus 256 VPv~~~s~~dlt~~l~ek~~t~eeI~~~lk 285 (356)
T 3hja_A 256 VPVPTGSIVDLTVQLKKKDVTKEEINSVLR 285 (356)
T ss_dssp ESCSSCEEEEEEEEESCTTCCHHHHHHHHH
T ss_pred cCCCccEeEEEEEEEccCCCCHHHHHHHHH
Confidence 999999999999999 99999999999874
No 15
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=1.6e-59 Score=418.45 Aligned_cols=265 Identities=88% Similarity=1.346 Sum_probs=239.1
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
||++||||+|+|++|++++|+|.+||++|+++|+++..+.+.++++++||++||+|..+.+....+..+.++|+.+.++.
T Consensus 1 mm~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~ 80 (337)
T 3e5r_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFG 80 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEEC
T ss_pred CCceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEe
Confidence 66789999999999999999999999999999999544778888999999999998512222202336888998888877
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCCCceEEeeeCcccccCCCCeEEcCCccchhhh
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLA 160 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~~~~~v~gvn~~~i~~~~~~V~~p~C~~ta~~ 160 (265)
..|+++++|...++|+||+|||++.+++.++.++++|+|+++||++.++.|++|||+|+++|+.++++||||||+||+++
T Consensus 81 ~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~d~p~~V~gvN~~~~~~~~~iIsnpsCtt~~la 160 (337)
T 3e5r_O 81 IRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLA 160 (337)
T ss_dssp CSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred cCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCCCCCEEEeccCHHHhCCCCcEEECCChHHHHHH
Confidence 67899999976789999999999999999999999999999998887778899999999999854789999999999999
Q ss_pred hHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEEeeec
Q 024629 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240 (265)
Q Consensus 161 l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~vP~~ 240 (265)
|+|+||+++|+|+++.+|++|++||+|..+|++..++++.+|.+++|++|+.+|+++|+.+++||++++++++++|||++
T Consensus 161 ~~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~ 240 (337)
T 3e5r_O 161 PLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTV 240 (337)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCSGGGSBGGGSCEEEECCHHHHHHHHSGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHhcCccccceeEEEeeccccccccccccccccccccHhhCccccCCCchHHHHHHHHHhCCcEEEEEEEeccC
Confidence 99999999999999999999999999999998755688999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 241 DVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 241 ~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
|||+.+++++++++++.|||+++|+
T Consensus 241 ~g~~~~l~~~l~k~~t~eei~~~~~ 265 (337)
T 3e5r_O 241 DVSVVDLTVRIEKAASYDAIKSAIK 265 (337)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CeEEEEEEEEECCCccHHHHHHHHH
Confidence 9999999999999999999999874
No 16
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.2e-59 Score=417.82 Aligned_cols=258 Identities=51% Similarity=0.863 Sum_probs=239.0
Q ss_pred cEEEEEccChhHHHHHHHHHcC--CCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 4 VKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~--p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
+||||+|+||+|++++|+|.+| |++|+++|++. .+.++++|+++||++||+|. +.+..+.+ .|.++|+.+.+++.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~-~~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~ 77 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL-TDTKTLAHLLKYDSVHKKFP-GKVEYTEN-SLIVDGKEIKVFAE 77 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS-SCHHHHHHHHHCCTTTCCCS-SCEEECSS-EEEETTEEEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC-CChHHhhhhccCcCcCCCcC-CcEEEcCC-EEEECCeEEEEEec
Confidence 5899999999999999999999 99999999996 48889999999999999998 77766544 78889998888766
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCCCc-eEEeeeCcccccCCCCeEEcCCccchhhh
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAP-MFVVGVNENEYKPELNIVSNASCTTNCLA 160 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~~~-~~v~gvn~~~i~~~~~~V~~p~C~~ta~~ 160 (265)
.|+++++|.+.++|+||+|||++.+++.++.++++|+|++|||++.++.| ++|||+|+++|+.++++|+|||||||+++
T Consensus 78 ~dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~d~p~~~V~eVN~~~i~~~~~iIsNpsCttn~la 157 (332)
T 1hdg_O 78 PDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIA 157 (332)
T ss_dssp SSGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred CChHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCCCCCceEEeccCHHHhCCCCcEEECCccHHHHHH
Confidence 78999999656899999999999999999999999999999988766678 99999999999844789999999999999
Q ss_pred hHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEEeeec
Q 024629 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240 (265)
Q Consensus 161 l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~vP~~ 240 (265)
|+|+||+++|||+++.++++|++||+|+.+|++ +++++++|.+++|++|+.+|+++|+.+++|+++++++++|+|||++
T Consensus 158 p~lkpL~~~~gI~~~~~ttvha~Sg~q~~~d~~-~~~~~~~r~~a~NiiP~~tg~a~ei~kvLp~l~gkl~~~a~rVP~~ 236 (332)
T 1hdg_O 158 PIVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLP-HKDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTP 236 (332)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCC-CSSTTTTSBGGGCCEEECCTHHHHHHHHCGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHhcCeeEeEEEEEEeccchhhhhcCc-ccccccchhHhhCcccccCCcccchhhhCccccCCEEEEeEEcccc
Confidence 999999999999999999999999999999986 5689999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 241 DVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 241 ~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
|||+.+++++++++++.|||+++|+
T Consensus 237 ~g~l~~l~~~l~k~~t~eei~~~lk 261 (332)
T 1hdg_O 237 DGSITDLTVLVEKETTVEEVNAVMK 261 (332)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CcEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999874
No 17
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=1.3e-59 Score=419.55 Aligned_cols=263 Identities=66% Similarity=1.056 Sum_probs=237.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
|+|+||||+|+||+|++++|+|.+||++|+++|+++..+.++++|+++||++||+|. +.+..+++ .+.++|+.+.+++
T Consensus 15 ~~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~-~~v~~~~~-~l~v~g~~i~v~~ 92 (354)
T 3cps_A 15 YFQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFN-GTVEVSGK-DLCINGKVVKVFQ 92 (354)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCS-SCEEECC--CEEETTEEEEEEC
T ss_pred CcceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCC-CcEEEeCC-EEEECCeEEEEEe
Confidence 346899999999999999999999999999999995458888899999999999998 77654443 6889999998887
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCC-CceEEeeeCcccccCC-CCeEEcCCccchh
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPE-LNIVSNASCTTNC 158 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~-~~~~v~gvn~~~i~~~-~~~V~~p~C~~ta 158 (265)
..|+++++|.+.++|+||+|||++++++.++.++++|+|++|||++.++ .|++|||+|+++|++. +++|||||||||+
T Consensus 93 ~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd~~p~~V~GVN~~~~~~~~~~IISNpsCtTn~ 172 (354)
T 3cps_A 93 AKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNC 172 (354)
T ss_dssp CSCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSCCCBCCTTTTGGGCCTTTCSEEECCCHHHHH
T ss_pred cCChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCCCCCEEEeccCHHHhCcCCCcEEECCCcHHHH
Confidence 6789999996678999999999999999999999999999999887544 7899999999999853 6899999999999
Q ss_pred hhhHHHHHHHhcCeeEEEEEEEeeccccccccCCCCC--ccccCccccccccccccCChhhhHhhhcccCCCceeEEEEE
Q 024629 159 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSS--KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFR 236 (265)
Q Consensus 159 ~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~--~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~ 236 (265)
++|+|+||+++|||+++.+|++|++||+|..+|++.. ++++.+|.+++|++|+.+|+++|+.+++|+++++++++++|
T Consensus 173 lap~lkpL~~~~gI~~g~mtTvha~Tg~q~~vd~~~~~~k~~r~~r~aa~NiiP~~tG~akei~kvlp~l~gkl~~~a~r 252 (354)
T 3cps_A 173 LAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIR 252 (354)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCCC--CCGGGSCTTSCCEEEECCHHHHHHHHSGGGTTTEEEEEEE
T ss_pred HHHHHHHHHHhCCeeEEEEEEEecccccchhhhccchhccccccccchhccEEecCcCHHHHHHHHHHhcCCcEEEEEEE
Confidence 9999999999999999999999999999999998741 57888999999999999999999999999999999999999
Q ss_pred eeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 237 VPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 237 vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
||++|||+.+++++++++++.|||+++|+
T Consensus 253 VP~~~gs~~dl~~~l~k~~t~eeI~~~~k 281 (354)
T 3cps_A 253 VPTPDVSVVDLTCKLAKPASIEEIYQAVK 281 (354)
T ss_dssp ESCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred eccCCEEEEEEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999999874
No 18
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=1.6e-58 Score=414.80 Aligned_cols=260 Identities=45% Similarity=0.794 Sum_probs=240.2
Q ss_pred CccEEEEEccChhHHHHHHHHHcC--CCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 2 GKVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~--p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
||+||||+|+|++|++++|+|.+| |++|+++|++. .+.++++|+++||++||+|. +.+..+.+ .|.++|+.+.++
T Consensus 1 M~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~-~d~~~~a~ll~yds~~G~~~-~~v~~~~~-~l~v~g~~i~v~ 77 (380)
T 2d2i_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKIV 77 (380)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEEE
T ss_pred CCcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC-CCHHHHHHhhcccccCCCCC-CcEEEeCC-eEEECCeEEEEE
Confidence 148999999999999999999999 99999999997 48899999999999999998 77765544 688899989888
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCC-Cc-eEEeeeCcccccC-CCCeEEcCCccc
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-AP-MFVVGVNENEYKP-ELNIVSNASCTT 156 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~-~~-~~v~gvn~~~i~~-~~~~V~~p~C~~ 156 (265)
+..||++++|.+.++|+||+|||++.+++.++.++++|+|+||||++.++ .| ++|||+|+++|++ ..++||||||+|
T Consensus 78 ~~~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d~~p~~~V~GVN~e~~~~~~~~IVSNasCtT 157 (380)
T 2d2i_A 78 CDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTT 157 (380)
T ss_dssp CCSCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHH
T ss_pred ecCChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCCCCCceEEcccCHHHhcccCCcEEECCchHH
Confidence 77789999996568999999999999999999999999999999888555 67 9999999999985 358999999999
Q ss_pred hhhhhHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEE
Q 024629 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFR 236 (265)
Q Consensus 157 ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~ 236 (265)
|+++|+|+||+++|||+++.+||+|++||+|+.+|++ +++|+.||.+++|++|+.+++.+++.+++||++++++++++|
T Consensus 158 n~lap~lk~L~d~fgI~~g~mTTvha~Tg~q~~vD~~-~~d~r~gR~aa~NiIP~~Tgaakav~kvlPeL~gkl~g~avR 236 (380)
T 2d2i_A 158 NCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDAS-HRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALR 236 (380)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCC-CSSTTTTSCGGGCCEEEECCHHHHHHHHCGGGTTTEEEEEEE
T ss_pred HHHHHHHHHHHHhcCeeEEEEEEEeeccccchhhccc-hhhhhhcchHhhCeEeccCchHHHHHhhhHhhhCcEEEEEEE
Confidence 9999999999999999999999999999999999987 568999999999999999999999999999999999999999
Q ss_pred eeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 237 VPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 237 vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
||+++||+.+++++|+++++.|||+++|+
T Consensus 237 VPt~~gs~~dlt~~l~k~~t~eeI~~~lk 265 (380)
T 2d2i_A 237 VPTPNVSVVDLVVQVEKPTITEQVNEVLQ 265 (380)
T ss_dssp ESCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred eccCCEEEEEEEEEECCcCCHHHHHHHHH
Confidence 99999999999999999999999999874
No 19
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=1.8e-58 Score=410.03 Aligned_cols=259 Identities=49% Similarity=0.807 Sum_probs=238.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcC--CCeEEEEEeccCCChhhhhhheeeecccCccccccee-eeCCceEEECCEEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELK-VKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~--p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~-~~~~~~l~~~g~~i~~~ 79 (265)
|+||||+|+||+|++++|+|.+| |++|+++|++. .+.++++||++||++||+|. +.+. .+.+ .|.++|+.+.++
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~-~~~~~~a~ll~sds~~G~~~-~~v~~~~~~-~l~v~g~~i~v~ 77 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT-GGVKQASHLLKYDSILGTFD-ADVKTAGDS-AISVDGKVIKVV 77 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT-TCHHHHHHHHHCCTTTCSCS-SCEEECTTS-EEEETTEEEEEE
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC-CCHHHHHHHhcccccCCCcc-ceeEEecCC-eEEECCeEEEEE
Confidence 47999999999999999999999 99999999995 58999999999999999998 6665 3333 588899999898
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCC-CceEEeeeCcccccCCCCeEEcCCccchh
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNC 158 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~-~~~~v~gvn~~~i~~~~~~V~~p~C~~ta 158 (265)
+..|+++++|.+.++|+||+|||++.+++.++.++++|+|+|++|++..+ .|++|||+|+++|++++++|+||||+||+
T Consensus 78 ~~~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~d~p~~V~GVN~~~~~~~~~IIsNasCtTn~ 157 (337)
T 1rm4_O 78 SDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNC 157 (337)
T ss_dssp CCSCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCCBCCTTTTGGGCCTTCSEEECCCHHHHH
T ss_pred ecCChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccCCCCeEeecCCHHHhCCCCeEEECCChHHHH
Confidence 87889999996568999999999999999999999999999999998444 68999999999998547899999999999
Q ss_pred hhhHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEEee
Q 024629 159 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 238 (265)
Q Consensus 159 ~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~vP 238 (265)
++|+|+||+++|||+++.+||+|++||+|...|++ +++|+.+|.+++|++|+.++..+.+.|++||++++++++++|||
T Consensus 158 lap~lk~L~~~fgI~~~~mtTvha~Tgaq~l~d~~-~~~~r~~r~~a~NiiP~~tgaakav~kvlPel~gkl~~~a~RVP 236 (337)
T 1rm4_O 158 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDAS-HRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVP 236 (337)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCC-CSSTTTTSCTTTCCEEECCCHHHHHHHHCGGGTTTEEEEEEEES
T ss_pred HHHHHHHHHHhcCeeEEEEEEEEecCCccchhhcc-hhhhccchhhhcCcccccchhhHHHHhhhhhhcCcEEEEEEEec
Confidence 99999999999999999999999999999888875 67999999999999999999999999999999999999999999
Q ss_pred ecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 239 TVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 239 ~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
+++||+.+++++++++++.|||+++|+
T Consensus 237 ~~~gs~~dl~~~l~k~~t~eei~~~lk 263 (337)
T 1rm4_O 237 TPNVSVVDLVVQVSKKTFAEEVNAAFR 263 (337)
T ss_dssp CSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CCCEEEEEEEEEECCCCCHHHHHHHHH
Confidence 999999999999999999999999874
No 20
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=2.7e-58 Score=408.32 Aligned_cols=257 Identities=51% Similarity=0.813 Sum_probs=238.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecCC
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~d 83 (265)
+||||+|+|++|++++|+|.+| ++++++|++. .+.++++||++||++||+|. +.+..+.+ .|.++|+.+.+++..|
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~-~~evvaind~-~~~~~~a~ll~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR-GVEVALINDL-TDNKTLAHLLKYDSIYHRFP-GEVAYDDQ-YLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEECSS-EEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCEEEEEecC-CCHHHHhHhhhccccCCCCC-ceEEEcCC-EEEECCEEEEEEecCC
Confidence 5899999999999999999999 8999999996 58999999999999999998 77776544 6889999999886668
Q ss_pred CCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCC-CceEEeeeCcccccC-CCCeEEcCCccchhhhh
Q 024629 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (265)
Q Consensus 84 ~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~-~~~~v~gvn~~~i~~-~~~~V~~p~C~~ta~~l 161 (265)
+++++|.+.++|+||+|||++++++.++.++++|+|++|||++.++ .|++|||+|+++|+. ..++|+||||+||+++|
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~lap 156 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAP 156 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcCCCCEEeeccCHHHhCcCCCCEEECCChHHHHHHH
Confidence 9999997678999999999999999999999999999999888655 789999999999984 36899999999999999
Q ss_pred HHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEEeeecc
Q 024629 162 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVD 241 (265)
Q Consensus 162 ~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~vP~~~ 241 (265)
+|+||+++|||+++.+||+|++||+|+.+|++ +++++++|.+++|++|+.+|+.+++.+++|+++++++++++|||+++
T Consensus 157 ~lk~L~~~fgI~~~~mtTvha~Tg~q~~~d~~-~~d~r~~r~~a~NiIP~~tGaakav~kIlp~L~gkl~g~a~RVPv~~ 235 (331)
T 2g82_O 157 VMKVLEEAFGVEKALMTTVHSYTNDQRLLDLP-HKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTAT 235 (331)
T ss_dssp HHHHHHHHTCEEEEEEEEEEECCTTSBSSSCC-CSSTTTTSBGGGCCEEECCCHHHHHTTTCGGGTTSEEEEEEEESCSS
T ss_pred HHHHHHHhcCccEEEEEEEeecccccchhccc-cccccccchhhhCccccCCCchhhhhhhHHhcCCCEEEEEEEeCCCC
Confidence 99999999999999999999999999999976 67899999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 242 VSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 242 G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
||+.+++++|+++++.|||+++|+
T Consensus 236 gs~~dl~v~l~k~~t~eei~~~lk 259 (331)
T 2g82_O 236 GSISDITALLKREVTAEEVNAALK 259 (331)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHH
T ss_pred EEEEEEEEEECCCCCHHHHHHHHH
Confidence 999999999999999999999874
No 21
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=7.7e-58 Score=407.29 Aligned_cols=260 Identities=45% Similarity=0.794 Sum_probs=240.2
Q ss_pred CccEEEEEccChhHHHHHHHHHcC--CCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 2 GKVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~--p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
||+||||+|+|++|++++|+|.+| |++|+++|++.. ++++++||++||++||+|. +.+..+.+ .|.++|+.+.++
T Consensus 1 M~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~-~~~~~~~l~~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~ 77 (339)
T 3b1j_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTS-DARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKIV 77 (339)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSS-CHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEEE
T ss_pred CceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCC-CHHHHHHHhccccccCCCC-CcEEEcCC-eeeecCceEEEE
Confidence 148999999999999999999999 999999999974 8889999999999999998 77766544 688899988888
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCC-Cc-eEEeeeCcccccC-CCCeEEcCCccc
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-AP-MFVVGVNENEYKP-ELNIVSNASCTT 156 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~-~~-~~v~gvn~~~i~~-~~~~V~~p~C~~ 156 (265)
+..||++++|.+.++|+||+|||++.+++.++.++++|+|+||||++.++ .| ++|||+|++++++ ..++||||||+|
T Consensus 78 ~~~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~~~p~~~V~gVN~~~~~~~~~~IISnasCtT 157 (339)
T 3b1j_A 78 CDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTT 157 (339)
T ss_dssp CCSCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHH
T ss_pred ecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCCCCCeeEEcccCHHHhCcCCCeEEECCcchh
Confidence 77789999997668999999999999999999999999999999887555 67 9999999999985 368999999999
Q ss_pred hhhhhHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEE
Q 024629 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFR 236 (265)
Q Consensus 157 ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~ 236 (265)
|+++|+|+||+++|||+++.++++|++||+|+.+|++ +++++.||.+++|++|+.+++.+++.+++||++++++++++|
T Consensus 158 n~lap~lk~L~~~fgI~~~~~tTvha~Tg~q~~vd~~-~~d~r~~r~a~~NiiP~~tgaakav~kVlpeL~gkl~g~a~r 236 (339)
T 3b1j_A 158 NCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDAS-HRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALR 236 (339)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCC-CSSTTTTSCTTSCCEEEECSHHHHHHHHCGGGTTTEEEEEEE
T ss_pred hHHHHHHHHHHHhCCeeEEEEEEEEeecCCchhcccc-hhhhhccccHHHceEcccCchHHHHHHHhHhhcCcEEEEEEE
Confidence 9999999999999999999999999999999999987 568999999999999999999999999999999999999999
Q ss_pred eeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 237 VPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 237 vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
||+++||+.+++++++++++.|||+++|+
T Consensus 237 VP~~~g~~~dl~v~l~k~~t~eeI~~~lk 265 (339)
T 3b1j_A 237 VPTPNVSVVDLVVQVEKPTITEQVNEVLQ 265 (339)
T ss_dssp ESCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred eccCCEEEEEEEEEEcCcCCHHHHHHHHH
Confidence 99999999999999999999999999874
No 22
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=9.4e-58 Score=407.03 Aligned_cols=259 Identities=38% Similarity=0.705 Sum_probs=228.9
Q ss_pred ccEEEEEccChhHHHHHHHHHc---CCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~---~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
++||||+|+||+|++++|+|.+ ||++|+++|++. .+.+.++|+++||++||+|. +.+..+.+ .|.++|+.+.++
T Consensus 2 ~ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~-~~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~ 78 (339)
T 2x5j_O 2 TVRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL-ADAAGMAHLLKYDTSHGRFA-WEVRQERD-QLFVGDDAIRVL 78 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEE
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC-CCHHHHHHHhcccccCCCCC-ceEEEcCC-eeEECCEEEEEE
Confidence 4899999999999999999999 999999999997 47889999999999999998 77665444 688899888887
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCC-CCCc-eEEeeeCcccccCCCCeEEcCCccch
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDAP-MFVVGVNENEYKPELNIVSNASCTTN 157 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~-~~~~-~~v~gvn~~~i~~~~~~V~~p~C~~t 157 (265)
+..||++++|.+.++|+||+|||++.+++.++.++++|+|+||||++. .+.| ++|||+|+++|+++.++||||||+||
T Consensus 79 ~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~d~p~~~V~gvN~~~~~~~~~iIsnpsCttn 158 (339)
T 2x5j_O 79 HERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTN 158 (339)
T ss_dssp CCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHH
T ss_pred ecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccCCCCceeecccCHHHhcCCCCEEECCCcHHH
Confidence 667888899965589999999999999999999999999999997774 5677 99999999999853689999999999
Q ss_pred hhhhHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccCCCceeEEEEEe
Q 024629 158 CLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRV 237 (265)
Q Consensus 158 a~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~~~~v~~~~~~v 237 (265)
+++|+|+||+++|+|+++.++++|++||+|+.+|++ +++++++|.+++|++|+.+|+++++.+++|+++++++++++||
T Consensus 159 ~lap~lkpL~~~~gI~~~~~ttvha~Tg~q~~~d~~-~~d~r~~r~a~~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rV 237 (339)
T 2x5j_O 159 CIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAY-HPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRV 237 (339)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEECCC------------CTTTTSCCCCCCEEECCCHHHHHHHHSGGGTTSEEEEEEEC
T ss_pred HHHHHHHHHHHccCcceeeEEEEEeccccccccccc-cccccchhhHHhCcccccCChHHHHHHHHHHhcCcEEEEEEEe
Confidence 999999999999999999999999999999988875 5689999999999999999999999999999999999999999
Q ss_pred eecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 238 PTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 238 P~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
|+++||+.+++++++++++.|||+++|+
T Consensus 238 P~~~g~~~~l~v~l~k~~t~eei~~~lk 265 (339)
T 2x5j_O 238 PTINVTAIDLSVTVKKPVKANEVNLLLQ 265 (339)
T ss_dssp SSCSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cccCcEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999999874
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=3.2e-46 Score=333.62 Aligned_cols=235 Identities=23% Similarity=0.256 Sum_probs=200.8
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeee--cccCcc--cccce-eeeCCceEEECCEEE
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQW--KHHEL-KVKDDKTLLFGEKPV 76 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~--~~~~~~--~~~~v-~~~~~~~l~~~g~~i 76 (265)
||+||||+|+|++|++++|+|.+||+++|+++++. +.++.+|+++|| ++||+| . +.+ ....+ .+.++
T Consensus 1 MmikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~--~~~~~~~l~~~dg~s~~g~~~~~-~~v~~~~~~-~l~v~---- 72 (343)
T 2yyy_A 1 MPAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT--KPDFEARLAVEKGYKLFVAIPDN-ERVKLFEDA-GIPVE---- 72 (343)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSCCH-HHHHHHHHT-TCCCC----
T ss_pred CceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC--CHHHHHHHHHhcCCccccccCCC-ceeecccCC-eEEEC----
Confidence 14899999999999999999999999999999996 377788999999 999998 3 322 11111 23222
Q ss_pred EEEecCCCCCCCccccCccEEEEecCCcccHHHHH-HHHhCCCcEEEEcCCCC-C-Cc-eEEeeeCcccccCCCCeEEcC
Q 024629 77 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAA-AHLKGGAKKVIISAPSK-D-AP-MFVVGVNENEYKPELNIVSNA 152 (265)
Q Consensus 77 ~~~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~-~~~~~g~~~vviS~~~~-~-~~-~~v~gvn~~~i~~~~~~V~~p 152 (265)
.+++++.| ++|+||+|||++.+.+.++ .++++|+ +|++|++.. + +| ++|||+|+++++. .++|+||
T Consensus 73 -----~~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG~-~VI~sap~~~d~vp~~vV~gvN~~~~~~-~~iIsn~ 142 (343)
T 2yyy_A 73 -----GTILDIIE---DADIVVDGAPKKIGKQNLENIYKPHKV-KAILQGGEKAKDVEDNFNALWSYNRCYG-KDYVRVV 142 (343)
T ss_dssp -----CBGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTTC-EEEECTTSCGGGSSEEECTTTTHHHHTT-CSEEEEC
T ss_pred -----CchHHhcc---CCCEEEECCCccccHHHHHHHHHHCCC-EEEECCCccccCCCceEEcccCHHHhcc-CCEEecc
Confidence 23444533 7999999999999999996 9999995 466788754 5 78 9999999999985 7899999
Q ss_pred CccchhhhhHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccc----cCChhhhHhhhcccCCC
Q 024629 153 SCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPS----STGAAKAVGKVLPALNG 228 (265)
Q Consensus 153 ~C~~ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~----~~~~~~~~~~~~~e~~~ 228 (265)
||+|++++++|+||+++|||+++.++|+|++||.+ +.+|++++|++|+ .+|+.+++.+++|++++
T Consensus 143 sCtT~~lap~lk~L~~~fgI~~~~vtT~~a~sg~~-----------~~~r~~~~NiiP~~i~~~tg~~k~~~kilp~l~g 211 (343)
T 2yyy_A 143 SCNTTGLCRILYAINSIADIKKARIVLVRRAADPN-----------DDKTGPVNAITPNPVTVPSHHGPDVVSVVPEFEG 211 (343)
T ss_dssp CHHHHHHHHHHHHHHTTSEEEEEEEEEEEESSCTT-----------CSSCCCSSCCEESSSSSSCTHHHHHHHHCGGGTT
T ss_pred chhhHHHHHHHHHHHHHcCceEEEEEeeeeccCcC-----------cchhhHHhcccCCCCCCCCcchHHHHHhhhcccc
Confidence 99999999999999999999999999999998821 3467899999999 88999999999999999
Q ss_pred ceeEEEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 229 KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 229 ~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
+++.+|+|||+++||+.+++++|+++++.||++++|+
T Consensus 212 kl~~~avRVPv~~gh~~~l~v~l~~~~t~eei~~~l~ 248 (343)
T 2yyy_A 212 KILTSAVIVPTTLMHMHTLMVEVDGDVSRDDILEAIK 248 (343)
T ss_dssp SEEEEEEEESCSSCEEEEEEEEEESCCCHHHHHHHHH
T ss_pred ceeeEEEEecccceEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999874
No 24
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=5e-44 Score=319.43 Aligned_cols=234 Identities=21% Similarity=0.233 Sum_probs=179.5
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcC--CCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEE
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~--p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~ 77 (265)
|+|+||+|+|+ |++|++++|+|.+| |++|+++++++...++ .+.++++.+.
T Consensus 1 ~~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~--------------------------~~~~~~~~i~ 54 (336)
T 2r00_A 1 SQQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGK--------------------------TYRFNGKTVR 54 (336)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTC--------------------------EEEETTEEEE
T ss_pred CCccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCC--------------------------ceeecCceeE
Confidence 45789999997 99999999999999 8999999997642221 2333444454
Q ss_pred EEecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCC---CCCCceEEeeeCcccccC--CCCeEEcC
Q 024629 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNENEYKP--ELNIVSNA 152 (265)
Q Consensus 78 ~~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~---~~~~~~~v~gvn~~~i~~--~~~~V~~p 152 (265)
+.. .+++ +| .++|+||+|+|++.+++.++.++++|++.+++|++ +++.|.++||+|+++|+. ++++|+||
T Consensus 55 ~~~-~~~~--~~--~~vDvVf~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIanp 129 (336)
T 2r00_A 55 VQN-VEEF--DW--SQVHIALFSAGGELSAKWAPIAAEAGVVVIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIANP 129 (336)
T ss_dssp EEE-GGGC--CG--GGCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEECC
T ss_pred Eec-CChH--Hh--cCCCEEEECCCchHHHHHHHHHHHcCCEEEEcCCccccCCCCCeEeccCCHHHhccccCCcEEECC
Confidence 532 3333 46 47999999999999999999999999965555776 356789999999999984 26799999
Q ss_pred CccchhhhhHHHHHHHhcCeeEEEEEEEeeccccc-cccCCCCC-----------ccccCccccccccccccC-----Ch
Q 024629 153 SCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQ-KTVDGPSS-----------KDWRGGRAASFNIIPSST-----GA 215 (265)
Q Consensus 153 ~C~~ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~-~~~d~~~~-----------~~~~~g~~~~~n~~p~~~-----~~ 215 (265)
|||||+++++|+||+++|+|+++.++++|++||++ ..+|++.. .++++++.+++|++|+.+ +|
T Consensus 130 ~C~tt~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh 209 (336)
T 2r00_A 130 NCSTIQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAFNCIPQIDQFMDNGY 209 (336)
T ss_dssp CHHHHHHHHHHHHHHHHHCEEEEEEEEEEESSSCCTTSCC-----------------------------CCBCTTTCSSC
T ss_pred ChHHHHHHHHHHHHHHhCCccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhhcCcccccCCcccCCc
Confidence 99999999999999999999999999999999995 46676422 256778889999999974 66
Q ss_pred hhh-------HhhhcccCCCceeEEEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 216 AKA-------VGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 216 ~~~-------~~~~~~e~~~~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
.+| ..+++|+.+++++|+|+|||++|||+.++|++++++++.+|++++|+
T Consensus 210 ~~Ee~k~~~e~~kil~~~~~~v~~t~~rVP~~~g~~~~~~~~l~~~~t~~ei~~~~~ 266 (336)
T 2r00_A 210 TKEEMKMVWETQKIFNDPSIMVNPTCVRVPVFYGHAEAVHVETRAPIDAEQVMDMLE 266 (336)
T ss_dssp BHHHHHHHHHHHHHTTCTTCEEEEEEEEESSCBSEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCCcEEEEeEEeccCcEEEEEEEEEeCCCCCHHHHHHHHH
Confidence 555 34667777889999999999999999999999999999999999884
No 25
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=5.5e-43 Score=311.96 Aligned_cols=228 Identities=23% Similarity=0.331 Sum_probs=189.7
Q ss_pred cEEEEEcc-ChhHHHHHHHHH--cCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 4 VKIGINGF-GRIGRLVARVIL--QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~--~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
+||+|+|+ |++|++++|+|. +||.+++..+.+.... |+.+.++|+.+.++.
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~--------------------------g~~l~~~g~~i~v~~ 54 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSA--------------------------GVRLAFRGEEIPVEP 54 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGS--------------------------SCEEEETTEEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccC--------------------------CCEEEEcCceEEEEe
Confidence 48999997 999999999999 7888877655443211 224666777677755
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCC---CCCCceEEeeeCcccccCCCCeEEcCCccch
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNENEYKPELNIVSNASCTTN 157 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~---~~~~~~~v~gvn~~~i~~~~~~V~~p~C~~t 157 (265)
. +++ +| ++|+||+|+|++.++++++.++++|++.++.|++ +++.|.++||+|+++|+..+++|+|||||+|
T Consensus 55 ~-~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~iIanp~C~tt 128 (331)
T 2yv3_A 55 L-PEG--PL---PVDLVLASAGGGISRAKALVWAEGGALVVDNSSAWRYEPWVPLVVPEVNREKIFQHRGIIANPNCTTA 128 (331)
T ss_dssp C-CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTCEEEECSSSSTTCTTSCBCCTTSCGGGGGGCSSEEECCCHHHH
T ss_pred C-Chh--hc---CCCEEEECCCccchHHHHHHHHHCCCEEEECCCccccCCCCCEEEcCcCHHHhcCCCCEEECCCHHHH
Confidence 3 444 46 7999999999999999999999999965555776 4467899999999999853579999999999
Q ss_pred hhhhHHHHHHHhcCeeEEEEEEEeecccc------------ccccCCCCCccccCcccccccccccc-----CChhhh--
Q 024629 158 CLAPLAKVIHDKFGIVEGLMTTVHSITAT------------QKTVDGPSSKDWRGGRAASFNIIPSS-----TGAAKA-- 218 (265)
Q Consensus 158 a~~l~L~pL~~~~~i~~~~~~~~~~~sg~------------~~~~d~~~~~~~~~g~~~~~n~~p~~-----~~~~~~-- 218 (265)
+++++|+||+++++|+++.++++|++||+ +..+|++..+++++++++++|++|+. |+|.+|
T Consensus 129 ~~~~~l~pL~~~~~I~~~~vtt~~~~SgaG~~~~~~l~~q~~~~~~~~~~~~~~~~~~~a~niiP~~~~~~~~~ht~e~~ 208 (331)
T 2yv3_A 129 ILAMALWPLHRAFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHPLPFNVIPHIDAFQENGYTREEM 208 (331)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHHTSSCCCCCSSSSCCTTCCBSCCSCBCTTSCBHHHH
T ss_pred HHHHHHHHHHHhCCceEEEEEEEeecccCCcchhHHHHHHHHhhhcCccccccccchhhhcCcccccCccccCCCcHHHH
Confidence 99999999999999999999999999998 45567665668899999999999987 445555
Q ss_pred -H----hhhc--ccCCCceeEEEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 219 -V----GKVL--PALNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 219 -~----~~~~--~e~~~~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
+ .+++ |++. ++|+|+|||++|||+.++|++++++++.+|++++|+
T Consensus 209 ~i~~e~~kil~~~~l~--v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~ 260 (331)
T 2yv3_A 209 KVVWETHKIFGDDTIR--ISATAVRVPTLRAHAEAVSVEFARPVTPEAAREVLK 260 (331)
T ss_dssp HHHHHHHHHTTCTTCE--EEEECCBCSCSSEEEEEEEEEESSCCCHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCce--EEEEEEEeccCceEEEEEEEEECCCCCHHHHHHHHH
Confidence 4 5666 6664 999999999999999999999999999999999985
No 26
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.7e-42 Score=309.91 Aligned_cols=232 Identities=13% Similarity=0.153 Sum_probs=188.1
Q ss_pred CccEEEEEcc-ChhHHHHHHHHH--cCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 2 GKVKIGINGF-GRIGRLVARVIL--QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 2 ~~~~V~IiG~-G~~G~~l~r~L~--~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
|++||+|+|+ |++|++++|+|. +||.+++++++++...++ .+.+++..+.+
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~--------------------------~~~~~g~~i~~ 58 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQ--------------------------RMGFAESSLRV 58 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTC--------------------------EEEETTEEEEC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCC--------------------------ccccCCcceEE
Confidence 3589999998 999999999999 889999999987642221 12234444444
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCC--CCCceEEeeeCcccccCCC---CeEEcCC
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS--KDAPMFVVGVNENEYKPEL---NIVSNAS 153 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~--~~~~~~v~gvn~~~i~~~~---~~V~~p~ 153 (265)
.. .+++. | .++|+||+|+|++.++++++.++++|+|++++|++. ++.|..++++|+++|+. + ++|+|||
T Consensus 59 ~~-~~~~~--~--~~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~-~~~~~iIanp~ 132 (340)
T 2hjs_A 59 GD-VDSFD--F--SSVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLAS-QAAPFLLSSPC 132 (340)
T ss_dssp EE-GGGCC--G--GGCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGG-SCSSCEEECCC
T ss_pred ec-CCHHH--h--cCCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhc-CcCCCEEEcCC
Confidence 32 23433 5 579999999999999999999999999766668772 34678888999999985 4 7999999
Q ss_pred ccchhhhhHHHHHHHhcCeeEEEEEEEeecccccc-ccCCCC-----------CccccCccccccccccccC-----Chh
Q 024629 154 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-TVDGPS-----------SKDWRGGRAASFNIIPSST-----GAA 216 (265)
Q Consensus 154 C~~ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~-~~d~~~-----------~~~~~~g~~~~~n~~p~~~-----~~~ 216 (265)
||||+++++|+||+++++|+++.++++|++||+++ .+|++. .....+++++++|++|+.. +|.
T Consensus 133 C~tt~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~ 212 (340)
T 2hjs_A 133 AVAAELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQVGAVDAEGHS 212 (340)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEEEEEEECGGGGCHHHHHHHHHHHHHHHTTCCCCCSSSSSCCTTCCBSSSSCBCTTSCB
T ss_pred HHHHHHHHHHHHHHHhcCcceEEEEEecccCCCCccccHhHHHHHHHHhccCCccccccchhhccCeeccccCcccCCcc
Confidence 99999999999999999999999999999999975 355411 0224556778999999975 766
Q ss_pred hh-------HhhhcccCCCceeEEEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 217 KA-------VGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 217 ~~-------~~~~~~e~~~~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
+| ..+++|+++++++|+|+|||++|||+.++|++++++++.+|++++|+
T Consensus 213 ~Ee~k~~~~~~kil~~~~~~v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~ 268 (340)
T 2hjs_A 213 AIERRIFAEVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQCAEPVDLAAVTRVLD 268 (340)
T ss_dssp HHHHHHHHHHHHHTGGGBCCEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeEEcCcCceEEEEEEEEECCCCCHHHHHHHHh
Confidence 66 34577777789999999999999999999999999999999999884
No 27
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.9e-43 Score=314.51 Aligned_cols=231 Identities=23% Similarity=0.285 Sum_probs=184.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeee--cccCcccccce-eeeCCceEEECCEEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQWKHHEL-KVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~--~~~~~~~~~~v-~~~~~~~l~~~g~~i~~~ 79 (265)
|+||||+|+|++|++++|+|.+||+++++++++.. ....++++.++ ++|+.|. +.+ ..+.. .+.+++
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~--~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~l~v~~------ 70 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTR--PDFEARMALKKGYDLYVAIP-ERVKLFEKA-GIEVAG------ 70 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESS--CSHHHHHHHHTTCCEEESSG-GGHHHHHHT-TCCCCE------
T ss_pred CeEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCC--hhHHHHhcCCcchhhccccc-cceeeecCC-ceEEcC------
Confidence 47999999999999999999999999999999874 33333444444 5677765 322 11100 121111
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCC-CC--ceEEeeeCcccccCCCCeEEcCCccc
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DA--PMFVVGVNENEYKPELNIVSNASCTT 156 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~-~~--~~~v~gvn~~~i~~~~~~V~~p~C~~ 156 (265)
+++++ ..++|+||+|||++.+++.++.++++|++ |+.+++++ +. |++|||+|++++++ +++|+||||++
T Consensus 71 ---~~~~~---~~~vDvV~~atp~~~~~~~a~~~l~aG~~-VId~sp~~~d~~~~~~V~gvN~e~~~~-~~iIanp~C~t 142 (337)
T 1cf2_P 71 ---TVDDM---LDEADIVIDCTPEGIGAKNLKMYKEKGIK-AIFQGGEKHEDIGLSFNSLSNYEESYG-KDYTRVVSCNT 142 (337)
T ss_dssp ---EHHHH---HHTCSEEEECCSTTHHHHHHHHHHHHTCC-EEECTTSCHHHHSCEECHHHHGGGGTT-CSEEEECCHHH
T ss_pred ---CHHHH---hcCCCEEEECCCchhhHHHHHHHHHcCCE-EEEecCCCCccCCCeEEeeeCHHHhcC-CCEEEcCCcHH
Confidence 12222 14789999999999999999999999975 55544433 33 89999999999985 78999999999
Q ss_pred hhhhhHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccc----cCChhhhHhhhcccCCCceeE
Q 024629 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPS----STGAAKAVGKVLPALNGKLTG 232 (265)
Q Consensus 157 ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~----~~~~~~~~~~~~~e~~~~v~~ 232 (265)
|+++++|+||+++|+|+++.++++|+.|| + +.+++.+++|++|+ .+++.+|..|++ +++ +++
T Consensus 143 t~l~~~l~pL~~~~gI~~~~vtt~~a~s~-------p----~~~~~~~~~NiiP~~i~~~~~~~~ei~kil-~l~--v~~ 208 (337)
T 1cf2_P 143 TGLCRTLKPLHDSFGIKKVRAVIVRRGAD-------P----AQVSKGPINAIIPNPPKLPSHHGPDVKTVL-DIN--IDT 208 (337)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEESSC-------T----TCTTCCCSSCCEESSSSSSCTHHHHHHTTS-CCC--EEE
T ss_pred HHHHHHHHHHHHhcCcceeEEEEEEEeec-------C----CccccchhcCEEeccCCCCCcchHHHHhhh-eeE--EEE
Confidence 99999999999999999999999998876 1 23456788999999 577889999999 775 999
Q ss_pred EEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 233 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 233 ~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
+|+|||++|||+.++|++|+++++.+|++++|+
T Consensus 209 t~~rVPv~~g~~~~~~v~l~~~~t~eei~~~~~ 241 (337)
T 1cf2_P 209 MAVIVPTTLMHQHNVMVEVEETPTVDDIIDVFE 241 (337)
T ss_dssp EEEEESCCSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred EEEEcCccCeEEEEEEEEECCCCCHHHHHHHHH
Confidence 999999999999999999999999999999884
No 28
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=100.00 E-value=2.3e-42 Score=310.46 Aligned_cols=236 Identities=17% Similarity=0.219 Sum_probs=185.0
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
++||||+|+ ||+|++|+|+|.+||++|++.+.+++..++.+...+.+ ..++.++ .. .+.+ .+ ..
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~-~~~~~~~-~~-----~~~~-------~v-~~ 71 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRW-QTVGQVP-KE-----IADM-------EI-KP 71 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCC-CSSSCCC-HH-----HHTC-------BC-EE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhccc-ccccccc-cc-----cccc-------eE-Ee
Confidence 589999999 99999999999999999999999887666654322100 0011111 00 0001 12 11
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCC---CCCCceEEeeeCcccccC--C--------CCe
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNENEYKP--E--------LNI 148 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~---~~~~~~~v~gvn~~~i~~--~--------~~~ 148 (265)
.+++++ .++|+||+|+|++.++++++.++++|++++++|++ +++.|..+||+|+++++. . +++
T Consensus 72 ~~~~~~----~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpk_A 72 TDPKLM----DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGGC----TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHHh----cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 233333 57999999999999999999999999977777887 456788999999999742 1 369
Q ss_pred EEcCCccchhhhhHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCC----hhhhHhhhcc
Q 024629 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTG----AAKAVGKVLP 224 (265)
Q Consensus 149 V~~p~C~~ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~----~~~~~~~~~~ 224 (265)
|+|||||+|+++++|+||++++||+++.++++|++||+++. . .+ ...+++|++|+..+ +.+|..++++
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~-~--~~-----~~~~~~N~ipy~~~~e~k~~~Ei~kil~ 219 (359)
T 4dpk_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP-G--IP-----SLDVVDNILPLGDGYDAKTIKEIFRILS 219 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECSGGGCSS-C--SB-----GGGTTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc-C--cc-----ChHHhCCeEeecCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999765 1 11 24578899999854 3356778888
Q ss_pred cCCC----------ceeEEEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 225 ALNG----------KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 225 e~~~----------~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
++.+ +++|+|+|||++|||+.++|+++++++|.+|++++|+
T Consensus 220 ~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~ 270 (359)
T 4dpk_A 220 EVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLE 270 (359)
T ss_dssp TSCCSCCCSCGGGCEEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred hcccccccccccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHH
Confidence 7654 7999999999999999999999999999999999884
No 29
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=100.00 E-value=8.7e-42 Score=306.59 Aligned_cols=232 Identities=16% Similarity=0.219 Sum_probs=184.1
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcC--CCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 3 KVKIGINGF-GRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~--p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
++||||+|+ ||+|++|+|+|.+| |.+++..+++++..++ .+.+.+.++.+
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~--------------------------~~~~~~~~~~~- 54 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGK--------------------------SLKFKDQDITI- 54 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTC--------------------------EEEETTEEEEE-
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCC--------------------------cceecCCCceE-
Confidence 589999999 99999999999998 8899999987653332 23334444444
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCC---CCCCceEEeeeCcccccCCCCeEEcCCccc
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNENEYKPELNIVSNASCTT 156 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~---~~~~~~~v~gvn~~~i~~~~~~V~~p~C~~ 156 (265)
...+++.+ .++|+||+|+|++.++++++.++++|++++++|++ +++.|..+||+|+++|+..+++|+|||||+
T Consensus 55 ~~~~~~~~----~~~Dvvf~a~~~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpevN~~~i~~~~~iIanpgC~t 130 (366)
T 3pwk_A 55 EETTETAF----EGVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNCST 130 (366)
T ss_dssp EECCTTTT----TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGTTCCSEEECCCHHH
T ss_pred eeCCHHHh----cCCCEEEECCChHhHHHHHHHHHHCCCEEEEcCCccccCCCceEEEccCCHHHHcCCCCeEECCCcHH
Confidence 22344443 58999999999999999999999999976666877 456789999999999985478999999999
Q ss_pred hhhhhHHHHHHHhcCeeEEEEEEEeecccccc-ccCCC---------------CCccccCc-------cccccccccccC
Q 024629 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-TVDGP---------------SSKDWRGG-------RAASFNIIPSST 213 (265)
Q Consensus 157 ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~-~~d~~---------------~~~~~~~g-------~~~~~n~~p~~~ 213 (265)
|+++++|+||+++++|+++.++++|++||+++ .+++. ......++ .++++|++|++.
T Consensus 131 t~~~l~l~pL~~~~~i~~i~v~t~~~vSGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~y~~~~~HrH~~ia~NviP~I~ 210 (366)
T 3pwk_A 131 IQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALPQID 210 (366)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEEEBCGGGGCHHHHHHHHHHHHHHHHHCCCGGGCCCSSSSCTTSSCCCCCTTCCBCCSS
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEEEeccccCcchhhHHHHHHHHHhcccccccccCcccCCcccccccchhhccccceec
Confidence 99999999999999999999999999999843 22100 00011122 679999999984
Q ss_pred -----ChhhhHhhhc-------ccCCCceeEEEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 214 -----GAAKAVGKVL-------PALNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 214 -----~~~~~~~~~~-------~e~~~~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
|+.+|+.|.. .....+++|+|+|||++|||+.++|++++++++.+|++++|+
T Consensus 211 ~~~~~g~t~EE~k~~~E~~kil~~~~~~v~ftp~rVPv~rG~~~tv~v~l~~~~s~eei~~~l~ 274 (366)
T 3pwk_A 211 VFTDNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIETKEVAPIEEVKAAIA 274 (366)
T ss_dssp CBCTTSSBHHHHHHHHHHHHHTTCTTSEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHHHH
T ss_pred ccccCCCcHHHHHHHHHHHHHhcCCCCCeEEEEEEechhccEEEEEEEEECCCCCHHHHHHHHH
Confidence 6667765443 333457999999999999999999999999999999999884
No 30
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=100.00 E-value=1.4e-41 Score=303.20 Aligned_cols=231 Identities=20% Similarity=0.318 Sum_probs=183.0
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcC--CCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 4 VKIGINGF-GRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~--p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
+||||+|+ ||+|++|+|+|.+| |.+|+..+++.+..++ .+.+.|+++.+ .
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~--------------------------~~~~~~~~~~~-~ 54 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGR--------------------------KLAFRGQEIEV-E 54 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSC--------------------------EEEETTEEEEE-E
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCC--------------------------ceeecCCceEE-E
Confidence 69999999 99999999999998 8999999987653332 23334444444 3
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCC---CCCCceEEeeeCc-ccccCC-CCeEEcCCcc
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNE-NEYKPE-LNIVSNASCT 155 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~---~~~~~~~v~gvn~-~~i~~~-~~~V~~p~C~ 155 (265)
..+++.+ .++|+||+|+|++.++++++.++++|++.++.|++ +++.|..+||+|+ +.|+.. .++|+|||||
T Consensus 55 ~~~~~~~----~~~Dvvf~a~~~~~s~~~a~~~~~~G~~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpgC~ 130 (344)
T 3tz6_A 55 DAETADP----SGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCT 130 (344)
T ss_dssp ETTTSCC----TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCCHH
T ss_pred eCCHHHh----ccCCEEEECCChHHHHHHHHHHHhCCCEEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCCcH
Confidence 2344433 58999999999999999999999999965556776 4568899999999 999742 4899999999
Q ss_pred chhhhhHHHHHHHhcCeeEEEEEEEeeccccccc-c-------------------CCCCC---ccccCcccccccccccc
Q 024629 156 TNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKT-V-------------------DGPSS---KDWRGGRAASFNIIPSS 212 (265)
Q Consensus 156 ~ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~-~-------------------d~~~~---~~~~~g~~~~~n~~p~~ 212 (265)
+|+++++|+||+++++|+++.++++|++||+++. + ++... ..+.++...+||++|++
T Consensus 131 tt~~~l~l~pL~~~~~i~~i~v~t~~~~SGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aynv~p~i 210 (344)
T 3tz6_A 131 TMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLA 210 (344)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHGGGGGGGGTCTTSSCCCCCSSSSSCCTTCCBCCC
T ss_pred HHHHHHHHHHHHHhCCCceEEEEeccCCCccChhhhHHHHHHHHhhhccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999998432 2 11100 12356778999999985
Q ss_pred -------CChhhhHhhh-------cccCCCceeEEEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 213 -------TGAAKAVGKV-------LPALNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 213 -------~~~~~~~~~~-------~~e~~~~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
+.|.+|++++ +..-..+++|+|+|||++|||+.++|++++++++.+|++++|+
T Consensus 211 ~~~~~~ghrHt~EE~k~~~e~~kilg~~~~~v~ft~vrvPv~rGh~~tv~v~l~~~~s~eei~~~l~ 277 (344)
T 3tz6_A 211 GSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQPLSPERARELLD 277 (344)
T ss_dssp SCBCSSSSCCBHHHHHHHHHHHHHHTCTTCEEEEECCBCSCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cccccCCCcCCHHHHHHHHHHHHhcCCCCCceEEEEEEeceeceEEEEEEEEECCCCCHHHHHHHHh
Confidence 3457774433 3212236999999999999999999999999999999999884
No 31
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=100.00 E-value=2.3e-42 Score=310.46 Aligned_cols=236 Identities=17% Similarity=0.219 Sum_probs=185.0
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
++||||+|+ ||+|++|+|+|.+||++|++.+.+++..++.+...+.+ ..++.++ .. .+.+ .+ ..
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~-~~~~~~~-~~-----~~~~-------~v-~~ 71 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRW-QTVGQVP-KE-----IADM-------EI-KP 71 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCC-CSSSCCC-HH-----HHTC-------BC-EE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhccc-ccccccc-cc-----cccc-------eE-Ee
Confidence 589999999 99999999999999999999999887666654322100 0011111 00 0001 12 11
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCC---CCCCceEEeeeCcccccC--C--------CCe
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNENEYKP--E--------LNI 148 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~---~~~~~~~v~gvn~~~i~~--~--------~~~ 148 (265)
.+++++ .++|+||+|+|++.++++++.++++|++++++|++ +++.|..+||+|+++++. . +++
T Consensus 72 ~~~~~~----~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpl_A 72 TDPKLM----DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGGC----TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHHh----cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 233333 57999999999999999999999999977777887 456788999999999742 1 369
Q ss_pred EEcCCccchhhhhHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCC----hhhhHhhhcc
Q 024629 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTG----AAKAVGKVLP 224 (265)
Q Consensus 149 V~~p~C~~ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~----~~~~~~~~~~ 224 (265)
|+|||||+|+++++|+||++++||+++.++++|++||+++. . .+ ...+++|++|+..+ +.+|..++++
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~-~--~~-----~~~~~~N~ipy~~~~e~k~~~Ei~kil~ 219 (359)
T 4dpl_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP-G--IP-----SLDVVDNILPLGDGYDAKTIKEIFRILS 219 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCGGGGCSS-C--SB-----HHHHTTCCEECCHHHHHHHHHHHHHHHT
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc-C--cc-----ChHHhCCeEeecCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999765 1 11 24578899999854 3456778888
Q ss_pred cCCC----------ceeEEEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 225 ALNG----------KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 225 e~~~----------~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
++.+ +++|+|+|||++|||+.++|+++++++|.+|++++|+
T Consensus 220 ~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~ 270 (359)
T 4dpl_A 220 EVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLE 270 (359)
T ss_dssp TSCCSSCCSCGGGCEEEEECEECSCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred hcccccccccccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHH
Confidence 7654 7999999999999999999999999999999999884
No 32
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=100.00 E-value=1.1e-41 Score=307.41 Aligned_cols=240 Identities=22% Similarity=0.282 Sum_probs=179.1
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe-ccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVN-DPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~-~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
|+|+||||+|+ ||+|++++|+|.+||++||..+. +.+..++.+. +.++.+. +. .+..+.+++.+
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~------~~~~~~~-~~-------~~p~~~~~~~v 82 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYK------DAASWKQ-TE-------TLPETEQDIVV 82 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHH------HHCCCCC-SS-------CCCHHHHTCBC
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHH------Hhccccc-cc-------ccccccccceE
Confidence 77899999999 99999999999999999999986 4544555433 2222211 00 00000001112
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCC---CCCCceEEeeeCccccc------------
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNENEYK------------ 143 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~---~~~~~~~v~gvn~~~i~------------ 143 (265)
...++++ +| .++|+||+|+|++.++++++.++++|++++++|++ +++.|++++++|.+.+.
T Consensus 83 -~~~~~~~-~~--~~~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~~~ 158 (381)
T 3hsk_A 83 -QECKPEG-NF--LECDVVFSGLDADVAGDIEKSFVEAGLAVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAVSK 158 (381)
T ss_dssp -EESSSCT-TG--GGCSEEEECCCHHHHHHHHHHHHHTTCEEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHHHT
T ss_pred -EeCchhh-hc--ccCCEEEECCChhHHHHHHHHHHhCCCEEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhccc
Confidence 2223331 23 57999999999999999999999999976667877 45678999999987653
Q ss_pred ---CCCCeEEcCCccchhhhhHHHHHHHhcC-eeEEEEEEEeeccccccccCCCCCccccCccccccccccccCCh----
Q 024629 144 ---PELNIVSNASCTTNCLAPLAKVIHDKFG-IVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGA---- 215 (265)
Q Consensus 144 ---~~~~~V~~p~C~~ta~~l~L~pL~~~~~-i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~---- 215 (265)
+++++|+|||||+|+++++|+||++++| |+++.+++++++||+++.... . ...+++|++|+..+.
T Consensus 159 ~~i~~~~iIaNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG~~~~~----~---~~~~~~N~~Py~~~~e~k~ 231 (381)
T 3hsk_A 159 GGKKPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAGFSPGV----S---GMDILDNIVPYISGEEDKL 231 (381)
T ss_dssp TCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC------C----C---HHHHTTCCBCCCTTHHHHH
T ss_pred ccccCCcEEECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCCccCCc----c---hhhhhcChhhcccchHHHH
Confidence 2467999999999999999999999878 888899999999998763111 1 236788999999653
Q ss_pred hhhHhhhcccCCC-------------ceeEEEEEeeecceEEEEEEEEeCC--CCCHHHHHHHhC
Q 024629 216 AKAVGKVLPALNG-------------KLTGMAFRVPTVDVSVVDLTVRLEK--DASYDEIKAAIK 265 (265)
Q Consensus 216 ~~~~~~~~~e~~~-------------~v~~~~~~vP~~~G~~~~~~~~l~~--~~~~~~v~~~~~ 265 (265)
.+|..|+++.+.+ +++|+|+|||++|||+.++|+++++ +++.+|++++|+
T Consensus 232 ~~Ei~kiL~~l~~~~~~~~~~~~~~~~v~ft~~rVPv~rG~~~tv~v~l~~~~~~t~eei~~~l~ 296 (381)
T 3hsk_A 232 EWETKKILGGVNAEGTEFVPIPESEMKVSAQCNRVPVIDGHTECISLRFANRPAPSVEDVKQCLR 296 (381)
T ss_dssp HHHHHHHTCEECTTSSSEECCCTTTCEEEEECCBCSCSSCCEEEEEEEESSSSCCCHHHHHHHHH
T ss_pred HHHHHHHhhhcccccccccccccCCCceEEEEEEeceeccEEEEEEEEeCCCCCCCHHHHHHHHH
Confidence 3566777775543 7899999999999999999999999 999999999884
No 33
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=100.00 E-value=7.5e-42 Score=307.16 Aligned_cols=237 Identities=21% Similarity=0.240 Sum_probs=183.7
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe-ccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVN-DPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 2 ~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~-~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
+|+||||+|+ |++|++++|+|.+||++|+++++ ++...++. |++.|+.+..+. +..++..+.+
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~------~~~~~~~~~~~~--------~~~~~~~~~~- 67 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKK------YKDAVKWIEQGD--------IPEEVQDLPI- 67 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSB------HHHHCCCCSSSS--------CCHHHHTCBE-
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCC------HHHhcCcccccc--------cccCCceeEE-
Confidence 4799999997 99999999999999999999998 44323332 355666541000 0001111223
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCC---CCCCceEEeeeCcccccC----------CC
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNENEYKP----------EL 146 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~---~~~~~~~v~gvn~~~i~~----------~~ 146 (265)
...++++ | .++|+||+|+|++.+.+.++.++++|++.+..|++ +++.|.++||+|++.|.. ++
T Consensus 68 ~~~d~~~--~--~~vDvVf~atp~~~s~~~a~~~~~aG~~VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~ 143 (350)
T 2ep5_A 68 VSTNYED--H--KDVDVVLSALPNELAESIELELVKNGKIVVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWKG 143 (350)
T ss_dssp ECSSGGG--G--TTCSEEEECCCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCSS
T ss_pred eeCCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccCc
Confidence 2223333 4 47999999999999999999999999864444665 345788999999876651 35
Q ss_pred CeEEcCCccchhhhhHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCC----hhhhHhhh
Q 024629 147 NIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTG----AAKAVGKV 222 (265)
Q Consensus 147 ~~V~~p~C~~ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~----~~~~~~~~ 222 (265)
++|+|||||||+++++|+||+++++++++.++++|++||+++. .. + .+.+++|++|+..+ +.+|..++
T Consensus 144 ~iIanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~~--~~-~-----~~~~~~ni~py~~~~e~k~~~E~~~~ 215 (350)
T 2ep5_A 144 ILVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGYN--GI-S-----FMAIEGNIIPYIKGEEDKIAKELTKL 215 (350)
T ss_dssp EEEECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCSS--SS-B-----HHHHTTCCBCCCTTHHHHHHHHHHHH
T ss_pred eEEEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCCC--CC-C-----ChHHhCCEEeccCCcchHHHHHHHHH
Confidence 7999999999999999999999899999999999999999765 11 1 34578899999976 34556788
Q ss_pred cccCCC--------ceeEEEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 223 LPALNG--------KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 223 ~~e~~~--------~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
++++.+ +++|+|+|||++|||+.++|++++++++.+|++++|+
T Consensus 216 l~~~~g~~~~~~~~~v~~t~~rvP~~~g~~~~i~~~l~~~~t~eei~~~~~ 266 (350)
T 2ep5_A 216 NGKLENNQIIPANLDSTVTSIRVPTRVGHMGVINIVTNERINIEEIKKTLK 266 (350)
T ss_dssp TCEECSSSEECCCCEEEEEEEECSCSSCEEEEEEEECCSCCCHHHHHHHHH
T ss_pred HhhccccccccccccEEEEeEEecccceEEEEEEEEECCCCCHHHHHHHHH
Confidence 887655 7999999999999999999999999999999999884
No 34
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=100.00 E-value=3.8e-41 Score=299.77 Aligned_cols=226 Identities=15% Similarity=0.148 Sum_probs=175.7
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccC---CChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPF---ITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~---~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
|+||+|+|+ |++|++++++|.+||+++++.+.+++ ..++.+. +.||.|. +. . .+ .+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~------~~~p~~~-~~----~--~~-------~v 63 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLIS------DLHPQLK-GI----V--EL-------PL 63 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHH------HHCGGGT-TT----C--CC-------BE
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchH------HhCcccc-Cc----c--ce-------eE
Confidence 589999999 99999999999999999999998876 4454432 4456554 21 0 11 12
Q ss_pred EecC-CCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCC-C-CC--C---------------ceEEeee-
Q 024629 79 FGVR-NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP-S-KD--A---------------PMFVVGV- 137 (265)
Q Consensus 79 ~~~~-d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~-~-~~--~---------------~~~v~gv- 137 (265)
... +.+++ ..++|+||+|+|++.++++++.++++|++++++|++ + ++ + +.+|||+
T Consensus 64 -~~~~~~~~~---~~~~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglP 139 (337)
T 3dr3_A 64 -QPMSDISEF---SPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLA 139 (337)
T ss_dssp -EEESSGGGT---CTTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCT
T ss_pred -eccCCHHHH---hcCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEcc
Confidence 111 33333 157999999999999999999999999977777887 2 11 2 1467775
Q ss_pred --CcccccCCCCeEEcCCccchhhhhHHHHHHH--hcCeeEE-EEEEEeecccccc-ccCCCCCccccCccccccccccc
Q 024629 138 --NENEYKPELNIVSNASCTTNCLAPLAKVIHD--KFGIVEG-LMTTVHSITATQK-TVDGPSSKDWRGGRAASFNIIPS 211 (265)
Q Consensus 138 --n~~~i~~~~~~V~~p~C~~ta~~l~L~pL~~--~~~i~~~-~~~~~~~~sg~~~-~~d~~~~~~~~~g~~~~~n~~p~ 211 (265)
|+++|+. +++|+|||||+|+++++|+||++ .++++++ .++++|++||+++ .++. ++++++ |+.|+
T Consensus 140 Evn~~~i~~-~~iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~-~~~~~~-------n~~py 210 (337)
T 3dr3_A 140 EWCGNKLKE-ANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAIS-NSFCEV-------SLQPY 210 (337)
T ss_dssp TTCCHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCST-TSGGGC-------SEEEC
T ss_pred ccCHHHhCC-CCEEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCcccccc-cccccc-------ceEcc
Confidence 9999984 89999999999999999999999 4677778 8899999999954 4442 333322 77777
Q ss_pred cCChhhhHhhhcccCCC----ceeEEEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 212 STGAAKAVGKVLPALNG----KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 212 ~~~~~~~~~~~~~e~~~----~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
..+. +||+||+.+ +++|+|+|||++|||+.++|++++++++.+|++++|+
T Consensus 211 ~~~~----h~h~Pei~~~l~~~v~ft~~rvPv~rG~~~ti~~~l~~~~t~eev~~~l~ 264 (337)
T 3dr3_A 211 GVFT----HRHQPEIATHLGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQALQ 264 (337)
T ss_dssp STTT----CTHHHHHHHHHTSCCEEEEEEESSSSCEEEEEEEEBCTTCCHHHHHHHHH
T ss_pred Cccc----ceechhHHhhhcCCEEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHH
Confidence 6542 567777655 7999999999999999999999999999999999874
No 35
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=100.00 E-value=3.4e-41 Score=303.61 Aligned_cols=233 Identities=16% Similarity=0.193 Sum_probs=177.3
Q ss_pred ccEEEEEcc-ChhHHHHHH-HHHcCC--CeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 3 KVKIGINGF-GRIGRLVAR-VILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r-~L~~~p--~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
++||||+|+ ||+|++|+| +|.+|| .+++..++++ ..++.+. .|. + ..+.+
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~----------~~~--------~-------~~~~v 57 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAP----------SFA--------K-------NETTL 57 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCC----------TTC--------C-------SCCBC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHH----------HcC--------C-------CceEE
Confidence 589999999 999999999 999998 6899888776 3443211 111 1 11112
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE--cCC---CCCCceEEeeeCcccccCC--C--CeE
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII--SAP---SKDAPMFVVGVNENEYKPE--L--NIV 149 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi--S~~---~~~~~~~v~gvn~~~i~~~--~--~~V 149 (265)
....+++. | .++|+||+|+|++.++++++.++++|+|.+|| |++ +++.|..+||+|+++++.. . ++|
T Consensus 58 ~~~~~~~~--~--~~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~I 133 (377)
T 3uw3_A 58 KDATSIDD--L--KKCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNF 133 (377)
T ss_dssp EETTCHHH--H--HTCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEE
T ss_pred EeCCChhH--h--cCCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcEE
Confidence 11112222 2 57999999999999999999999999865666 544 3457889999999988631 1 459
Q ss_pred EcCCccchhhhhHHHHHHHhcCeeEEEEEEEeecccccccc-C------------------------------------C
Q 024629 150 SNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTV-D------------------------------------G 192 (265)
Q Consensus 150 ~~p~C~~ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~-d------------------------------------~ 192 (265)
+|||||+|+++++|+||+++++|+++.++++|++||+++.. + +
T Consensus 134 anp~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~l~~~~~~~~~~p~~~ild~~~~~~~~~~~ 213 (377)
T 3uw3_A 134 IGGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGAGAQNMRELLAQMGTLNGAVAAQLADPASAILDIDRRVLAAMNG 213 (377)
T ss_dssp EECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHTTHHHHTCTTSCHHHHHHHHHHHHHS
T ss_pred EcCCHHHHHHHHHHHHHHHhCCCCEEEEeeeecccccchhhHHHHHHHHHHhhccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999984321 1 0
Q ss_pred CCCccccCcccccccccccc-----CChhhhHh-------hhcccC------CCceeEEEEEeeecceEEEEEEEEeCCC
Q 024629 193 PSSKDWRGGRAASFNIIPSS-----TGAAKAVG-------KVLPAL------NGKLTGMAFRVPTVDVSVVDLTVRLEKD 254 (265)
Q Consensus 193 ~~~~~~~~g~~~~~n~~p~~-----~~~~~~~~-------~~~~e~------~~~v~~~~~~vP~~~G~~~~~~~~l~~~ 254 (265)
.+.....+++++++|++|+. +|+.+|+. ++++.. ..+++|||||||++|||+.++|++|+++
T Consensus 214 ~~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~~~~~i~Vs~t~vrVPv~rGh~~tv~v~~~~~ 293 (377)
T 3uw3_A 214 DAMPTSQFGVPLAGSLIPWIDKDLGNGMSREEWKGGAETNKILGKPAMGEPGSVPVDGLCVRIGAMRCHSQALTIKLKKD 293 (377)
T ss_dssp TTSCCTTTSSCCTBSCBSCCSCBCSSSCBHHHHHHHHHHHHHHTCCCTTSTTCCCEEEECCBCSBSSEEEEEEEEEESSC
T ss_pred cccccccccccccCceEEeecccccCCCCHHHHHHHHHHHHHhcccccccCCCceEEEEeEEecccceEEEEEEEEeCCC
Confidence 01113456778999999997 45666644 444432 3468999999999999999999999999
Q ss_pred CCHHHHHHHhC
Q 024629 255 ASYDEIKAAIK 265 (265)
Q Consensus 255 ~~~~~v~~~~~ 265 (265)
++.+|++++|+
T Consensus 294 ~~~eei~~~l~ 304 (377)
T 3uw3_A 294 VPLDEINGILA 304 (377)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 99999999884
No 36
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=100.00 E-value=1.8e-40 Score=298.23 Aligned_cols=232 Identities=17% Similarity=0.174 Sum_probs=176.2
Q ss_pred cEEEEEcc-ChhHHHHHH-HHHcCC--CeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 4 VKIGINGF-GRIGRLVAR-VILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r-~L~~~p--~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
+||||+|+ ||+|++|+| +|.+|| .+++..+++++ .++.+. .|. |..+.+.
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~----------~~~---------------~~~~~~~ 54 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAP----------NFG---------------KDAGMLH 54 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCC----------CSS---------------SCCCBCE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHH----------HhC---------------CCceEEE
Confidence 58999999 999999999 999998 68999988775 443211 011 1111121
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE--cCC---CCCCceEEeeeCcccccCC----CCeEE
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII--SAP---SKDAPMFVVGVNENEYKPE----LNIVS 150 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi--S~~---~~~~~~~v~gvn~~~i~~~----~~~V~ 150 (265)
...+++++ .++|+||+|+|++.++++++.++++|+|.+|| |++ +++.|..+||+|+++++.. .++|+
T Consensus 55 ~~~~~~~~----~~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ia 130 (370)
T 3pzr_A 55 DAFDIESL----KQLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFV 130 (370)
T ss_dssp ETTCHHHH----TTCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred ecCChhHh----ccCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEE
Confidence 11122222 57999999999999999999999999865666 443 3457889999999988631 24699
Q ss_pred cCCccchhhhhHHHHHHHhcCeeEEEEEEEeecccccccc-C------------------------------------CC
Q 024629 151 NASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTV-D------------------------------------GP 193 (265)
Q Consensus 151 ~p~C~~ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~-d------------------------------------~~ 193 (265)
|||||+|+++++|+||+++++|+++.++++|++||+++.. + +.
T Consensus 131 np~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~~~~~~~~~l~~p~~~ild~~~~~~~~~~~~ 210 (370)
T 3pzr_A 131 GGNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGAGAQNMRELISQMGVINDAVSSELANPASSILDIDKKVAETMRSG 210 (370)
T ss_dssp ECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHST
T ss_pred cCChHHHHHHHHHHHHHHhCCCcEEEEEeEEeccccChhhHHHHHHHHHHhhcccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999984321 1 00
Q ss_pred CCccccCcccccccccccc-----CChhhhHh-------hhccc--CCCceeEEEEEeeecceEEEEEEEEeCCCCCHHH
Q 024629 194 SSKDWRGGRAASFNIIPSS-----TGAAKAVG-------KVLPA--LNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDE 259 (265)
Q Consensus 194 ~~~~~~~g~~~~~n~~p~~-----~~~~~~~~-------~~~~e--~~~~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~ 259 (265)
......+++++++|++|+. +|+.+|+. ++++. -..+++|+|||||++|||+.++|++++++++.+|
T Consensus 211 ~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~i~V~~t~vrVPv~rGh~~tv~v~~~~~~~~~e 290 (370)
T 3pzr_A 211 SFPTDNFGVPLAGSLIPWIDVKRDNGQSKEEWKAGVEANKILGLQDSPVPIDGTCVRIGAMRCHSQALTIKLKQNIPLDE 290 (370)
T ss_dssp TSCCTTTSSCCTTSEESCCSCBCTTSCBHHHHHHHHHHHHHTTCTTSCCCEECCCCEESCSSEEEEEEEEEESSCCCHHH
T ss_pred ccccccccccccCceeeeccccccCCCCHHHHHHHHHHHHHhCccCCCceEEEEeEEecccceEEEEEEEEeCCCCCHHH
Confidence 1112456778999999997 35555543 44442 1336899999999999999999999999999999
Q ss_pred HHHHhC
Q 024629 260 IKAAIK 265 (265)
Q Consensus 260 v~~~~~ 265 (265)
++++|+
T Consensus 291 i~~~l~ 296 (370)
T 3pzr_A 291 IEEMIA 296 (370)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999884
No 37
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-39 Score=292.25 Aligned_cols=229 Identities=16% Similarity=0.063 Sum_probs=177.0
Q ss_pred CC-ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 1 MG-KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~-~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
|| |+||+|+|+ |++|++++|+|.+||++|+++++++...+ .+|++.|+.|. +. . .+ .+
T Consensus 1 M~~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g------~~~~~~~~~~~-g~-----~-~~-------~~ 60 (345)
T 2ozp_A 1 MTGKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAG------EPVHFVHPNLR-GR-----T-NL-------KF 60 (345)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTT------SBGGGTCGGGT-TT-----C-CC-------BC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhC------chhHHhCchhc-Cc-----c-cc-------cc
Confidence 54 799999997 99999999999999999999999865333 23567777775 21 0 11 12
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCC-CCC-----------------CceEEeee---
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP-SKD-----------------APMFVVGV--- 137 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~-~~~-----------------~~~~v~gv--- 137 (265)
. +.+ +| .++|+||+|+|++.+++.++.++++|++.+++|++ .-+ .+.++||+
T Consensus 61 ~---~~~--~~--~~vDvV~~a~g~~~s~~~a~~~~~aG~~VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~ 133 (345)
T 2ozp_A 61 V---PPE--KL--EPADILVLALPHGVFAREFDRYSALAPVLVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPEL 133 (345)
T ss_dssp B---CGG--GC--CCCSEEEECCCTTHHHHTHHHHHTTCSEEEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHH
T ss_pred c---chh--Hh--cCCCEEEEcCCcHHHHHHHHHHHHCCCEEEEcCccccCCChHHHHhhhccccchhhhccCcEecccc
Confidence 1 222 25 47999999999999999999999999865555775 211 13577775
Q ss_pred CcccccCCCCeEEcCCccchhhhhHHHHHHHhcCee--EEEEEEEeeccccccc-cCCCCCccccCccccccccccccCC
Q 024629 138 NENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQKT-VDGPSSKDWRGGRAASFNIIPSSTG 214 (265)
Q Consensus 138 n~~~i~~~~~~V~~p~C~~ta~~l~L~pL~~~~~i~--~~~~~~~~~~sg~~~~-~d~~~~~~~~~g~~~~~n~~p~~~~ 214 (265)
|+++|+. +++|+|||||+|+++++|+||+++++|+ ++.++++|++||+++. +|.. ++++ ...|++|+..+
T Consensus 134 n~~~i~~-~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~-~~~~-----~~~n~~py~~~ 206 (345)
T 2ozp_A 134 YREALKG-ADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPAS-HHPE-----RAGSIRVYKPT 206 (345)
T ss_dssp HHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCSSCCGGG-CHHH-----HTTCCEEEECS
T ss_pred CHHHhhc-CCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCccccccc-cchh-----hccccccCCCC
Confidence 9999985 8999999999999999999999999999 8999999999999654 4432 2232 34567776644
Q ss_pred ---hhhhHhhhcccCCC-ceeEEEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 215 ---AAKAVGKVLPALNG-KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 215 ---~~~~~~~~~~e~~~-~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
+.+|+.+.++ .+ +++|+|+|||++|||+.++|++++++++.+|++++|+
T Consensus 207 ~h~~~pei~~~l~--~~~~v~~~~~rvP~~~g~~~~i~~~l~~~~t~eei~~~~~ 259 (345)
T 2ozp_A 207 GHRHTAEVVENLP--GRPEVHLTAIATDRVRGILMTAQCFVQDGWSERDVWQAYR 259 (345)
T ss_dssp CCTHHHHHHHTSS--SCCCEEEEEEECSCSSCEEEEEEEEBCTTCCHHHHHHHHH
T ss_pred CccChHhHHHHhC--CCCCeEEEEEEeccccEEEEEEEEEeCCCCCHHHHHHHHH
Confidence 3344444433 14 7999999999999999999999999999999999874
No 38
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=100.00 E-value=3.5e-40 Score=296.86 Aligned_cols=232 Identities=12% Similarity=0.123 Sum_probs=177.6
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
|+++||+|+|+ |++|++++|+|.+||++|+++++++.... .+|++.||.|. +.+ . . .+ .+
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g------~~~~~~~~~~~-~~v-~--~-dl-------~~- 74 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAG------QSMESVFPHLR-AQK-L--P-TL-------VS- 74 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT------SCHHHHCGGGT-TSC-C--C-CC-------BC-
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC------CCHHHhCchhc-Ccc-c--c-cc-------ee-
Confidence 44689999997 99999999999999999999999875333 33567788776 321 0 0 11 11
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCC-CCC------------------ceEEeee---
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDA------------------PMFVVGV--- 137 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~-~~~------------------~~~v~gv--- 137 (265)
. + ++ .| .++|+||+|+|++.+++.++.+ ++|++.+++|++. -+. +.++||+
T Consensus 75 ~--~-~~-~~--~~vDvVf~atp~~~s~~~a~~~-~aG~~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~ 147 (359)
T 1xyg_A 75 V--K-DA-DF--STVDAVFCCLPHGTTQEIIKEL-PTALKIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEI 147 (359)
T ss_dssp G--G-GC-CG--GGCSEEEECCCTTTHHHHHHTS-CTTCEEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHH
T ss_pred c--c-hh-Hh--cCCCEEEEcCCchhHHHHHHHH-hCCCEEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECCcc
Confidence 1 2 33 36 4799999999999999999999 9998655557762 111 3578886
Q ss_pred CcccccCCCCeEEcCCccchhhhhHHHHHHHhcCee--EEEEEEEeeccccccc-cCCCCCccccCcccccccccccc--
Q 024629 138 NENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQKT-VDGPSSKDWRGGRAASFNIIPSS-- 212 (265)
Q Consensus 138 n~~~i~~~~~~V~~p~C~~ta~~l~L~pL~~~~~i~--~~~~~~~~~~sg~~~~-~d~~~~~~~~~g~~~~~n~~p~~-- 212 (265)
|+++|+. +++|+|||||+|+++++|+||+++++|+ ++.++++|++||+++. .|. +++++ ...|++|+.
T Consensus 148 n~~~i~~-~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~-~~~~~-----~~~ni~py~~~ 220 (359)
T 1xyg_A 148 LREDIKK-ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGRGAKEA-NLYSE-----IAEGISSYGVT 220 (359)
T ss_dssp HHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCSCCCGG-GBHHH-----HTTCCEECSCS
T ss_pred CHHHhcc-CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCcccchh-hhhHH-----HhcCeeccccc
Confidence 9999985 8999999999999999999999999999 8899999999999764 453 23333 344666665
Q ss_pred -CChhhhHhhhcccC---CCceeEEEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 213 -TGAAKAVGKVLPAL---NGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 213 -~~~~~~~~~~~~e~---~~~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
|.+.+|+.+.+..+ ..+++|+|+|||++|||+.++|++++++++.||++++|+
T Consensus 221 ~h~h~pEi~~~l~~~~~~~~~v~~t~~rvP~~~G~~~~i~~~l~~~~t~eei~~~~~ 277 (359)
T 1xyg_A 221 RHRHVPEIEQGLSDVAQSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVRTEDLHQQLK 277 (359)
T ss_dssp CCTHHHHHHHHHHHHHTSCCCCEEECEEESSSSCEEEEEEEEBCTTCCHHHHHHHHH
T ss_pred ccccHHHHHHHHHHhcCCCCCEEEEEEEecccceEEEEEEEEeCCCCCHHHHHHHHH
Confidence 34555554433322 126999999999999999999999999999999999884
No 39
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=100.00 E-value=4.5e-40 Score=296.55 Aligned_cols=232 Identities=16% Similarity=0.171 Sum_probs=177.0
Q ss_pred ccEEEEEcc-ChhHHHHHH-HHHcC--CCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 3 KVKIGINGF-GRIGRLVAR-VILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r-~L~~~--p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
|+||||+|+ |++|++++| +|.+| |.+++..+.+++ .++.+ +.+ +|+.+.+
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~G~~v----------~~~---------------~g~~i~~ 54 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-LGQAA----------PSF---------------GGTTGTL 54 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBC----------CGG---------------GTCCCBC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-CCCCc----------ccc---------------CCCceEE
Confidence 369999998 999999999 77777 457777776653 33211 011 1112233
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEc--CC---CCCCceEEeeeCcccccCCC-----Ce
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS--AP---SKDAPMFVVGVNENEYKPEL-----NI 148 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS--~~---~~~~~~~v~gvn~~~i~~~~-----~~ 148 (265)
....++++ | .++|+||+|+|++.++++++.++++|+|.+||+ ++ +++.|.++||+|+++++. + ++
T Consensus 55 ~~~~~~~~--~--~~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~-~~~~g~~~ 129 (367)
T 1t4b_A 55 QDAFDLEA--L--KALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITD-GLNNGIRT 129 (367)
T ss_dssp EETTCHHH--H--HTCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHH-HHHTTCCE
T ss_pred EecCChHH--h--cCCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhh-hhhcCCCE
Confidence 32223332 5 479999999999999999999999998767773 33 346788999999999874 2 69
Q ss_pred EEcCCccchhhhhHHHHHHHhcCeeEEEEEEEeeccccccc-------------------cCCCC---------------
Q 024629 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKT-------------------VDGPS--------------- 194 (265)
Q Consensus 149 V~~p~C~~ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~-------------------~d~~~--------------- 194 (265)
|+||||++|+++++|+||+++++|+++.++++|++||+++. .|.+.
T Consensus 130 Ianp~Cttt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG~~~~~el~~~~~~l~~~~~~~~~~~~~~ild~~r~~~~~~~ 209 (367)
T 1t4b_A 130 FVGGNCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTR 209 (367)
T ss_dssp EEECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHTHHHHTCTTCCHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHHHHHcCCCcEEEEEEEeccccccccchHHHHHHHhhhhccccccccccccchhhhhhccccccc
Confidence 99999999999999999999999999999999999998432 12221
Q ss_pred ---CccccCccccccccccccCC-----hhhh-------Hhhhccc-CCCceeEEEEEeeecceEEEEEEEEeCCCCCHH
Q 024629 195 ---SKDWRGGRAASFNIIPSSTG-----AAKA-------VGKVLPA-LNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYD 258 (265)
Q Consensus 195 ---~~~~~~g~~~~~n~~p~~~~-----~~~~-------~~~~~~e-~~~~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~ 258 (265)
.....+++.+++|++|+..+ +.+| ..+++++ ...+++++|+|||++|||+.++|++++++++.+
T Consensus 210 ~~~~~~~~f~~~~a~NiiP~~~~~~~~~~t~EE~k~~~e~~kil~~~~~~~v~~t~vrVPv~~g~~~~v~v~l~~~~t~e 289 (367)
T 1t4b_A 210 SGELPVDNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQAFTIKLKKDVSIP 289 (367)
T ss_dssp HTCSCCTTTSSCCTTCEESCCSCBCTTSCBHHHHHHHHHHHHHHTCSSCCCEEEECCEESCSSEEEEEEEEEESSCCCHH
T ss_pred cccCcccccchhhhCceEEEecCccccCccHHHHHHHHHHHHHhCcCCCceEEEEEEEcCccceEEEEEEEEECCCCCHH
Confidence 12245578899999999864 4444 4566654 345799999999999999999999999999999
Q ss_pred HHHHHhC
Q 024629 259 EIKAAIK 265 (265)
Q Consensus 259 ~v~~~~~ 265 (265)
|++++|+
T Consensus 290 ei~~~l~ 296 (367)
T 1t4b_A 290 TVEELLA 296 (367)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999884
No 40
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=100.00 E-value=4.2e-40 Score=295.00 Aligned_cols=234 Identities=12% Similarity=0.061 Sum_probs=180.8
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCC-----CeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCE
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p-----~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~ 74 (265)
|+|+||+|+|+ |++|++++|+|.+|| ++|++++++++..++. +++.|++|. +. .. +
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~------~~~~~~~l~-~~----~~--~----- 68 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGST------LGEHHPHLT-PL----AH--R----- 68 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSB------GGGTCTTCG-GG----TT--C-----
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCc------hhhhccccc-cc----ce--e-----
Confidence 66789999999 999999999999999 9999999876533332 345677765 21 01 1
Q ss_pred EEEEEecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCC-CCCC----------------ceEEeee
Q 024629 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP-SKDA----------------PMFVVGV 137 (265)
Q Consensus 75 ~i~~~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~-~~~~----------------~~~v~gv 137 (265)
.+.. .++++ | .++|+||+|+|++.++++++.+ ++|++++++|++ .-+. +..+||+
T Consensus 69 --~~~~-~~~~~--~--~~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv 140 (352)
T 2nqt_A 69 --VVEP-TEAAV--L--GGHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPEL 140 (352)
T ss_dssp --BCEE-CCHHH--H--TTCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTS
T ss_pred --eecc-CCHHH--h--cCCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEeccc
Confidence 1111 12222 3 4799999999999999999999 999876667877 2111 3333445
Q ss_pred --CcccccCCCCeEEcCCccchhhhhHHHHHHHhcCee-EEEEEEEeecccc-ccccCCCCCccccCccccccccccccC
Q 024629 138 --NENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV-EGLMTTVHSITAT-QKTVDGPSSKDWRGGRAASFNIIPSST 213 (265)
Q Consensus 138 --n~~~i~~~~~~V~~p~C~~ta~~l~L~pL~~~~~i~-~~~~~~~~~~sg~-~~~~d~~~~~~~~~g~~~~~n~~p~~~ 213 (265)
|+++|+ ++++|+|||||+|+++++|+||+++++|+ ++.+++++++||+ +..++. ++++++.++..+||+.|. |
T Consensus 141 ~~n~~~i~-~~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~~~~-~~~~~~~~~~~ay~~~~~-h 217 (352)
T 2nqt_A 141 PGARDQLR-GTRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAATTD-LLGAEVIGSARAYNIAGV-H 217 (352)
T ss_dssp TTHHHHHT-TCSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSCCGG-GSHHHHTTCCEECSTTTT-S
T ss_pred ccCHHHHh-cCCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCcccccc-ccHHHHhhhcccccCCCc-c
Confidence 999998 48999999999999999999999999998 8889999999999 444443 355677778888998872 3
Q ss_pred ChhhhHhhhcccC---CCceeEEEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 214 GAAKAVGKVLPAL---NGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 214 ~~~~~~~~~~~e~---~~~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
.|.+|+.+.+..+ ..+++|+|+|||++|||+.++|++++++ .+|++++|+
T Consensus 218 ~h~pEi~~e~~ki~~~~~~v~ft~~rvP~~rG~~~ti~~~l~~~--~~ei~~~~~ 270 (352)
T 2nqt_A 218 RHTPEIAQGLRAVTDRDVSVSFTPVLIPASRGILATCTARTRSP--LSQLRAAYE 270 (352)
T ss_dssp TTHHHHHHHHHTTCSSCCEEEEEEEECSCSSCEEEEEEEECCSC--HHHHHHHHH
T ss_pred eecHHHHHHHHHHhCCCCCEEEEEEEEccccEEEEEEEEEECCC--HHHHHHHHH
Confidence 4667765444333 4579999999999999999999999887 899998874
No 41
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=5.7e-39 Score=288.96 Aligned_cols=239 Identities=21% Similarity=0.270 Sum_probs=179.4
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec-cCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVND-PFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 2 ~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~-~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
||+||+|+|+ |++|++++|+|.+||++|++++++ +...++. +++.|+.+.... +..++.++.+
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~------~~~~~~~~~~~~--------~~~~~~~~~~- 71 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKK------YKDACYWFQDRD--------IPENIKDMVV- 71 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSB------HHHHSCCCCSSC--------CCHHHHTCBC-
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEccccccccc------HHHhcccccccc--------cccCceeeEE-
Confidence 3589999997 999999999999999999999984 4333332 245555541000 0000011112
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCC---CCCCceEEeeeCcccccC----------CC
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNENEYKP----------EL 146 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~---~~~~~~~v~gvn~~~i~~----------~~ 146 (265)
...++++ |...++|+||+|+|++.+.+.++.++++|++.+..|++ +++.|.++||+|++.+.. ++
T Consensus 72 ~~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~~VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~ 149 (354)
T 1ys4_A 72 IPTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGKLIFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGWDG 149 (354)
T ss_dssp EESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTCEEEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCCSS
T ss_pred EeCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCCEEEECCchhcCCCCCCccCcccCHHHhcChhhhhhhcccCC
Confidence 2134444 43227999999999999999999999999853333554 345778889999876651 25
Q ss_pred CeEEcCCccchhhhhHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCC----hhhhHhhh
Q 024629 147 NIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTG----AAKAVGKV 222 (265)
Q Consensus 147 ~~V~~p~C~~ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~----~~~~~~~~ 222 (265)
++|+|||||+|+++++|+||++++||+++.++++|++||+++.. .+ .+.+++|++|+..+ +.+|..++
T Consensus 150 ~iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~~~---~~-----~~~~~~ni~py~~~~~~k~~~Ei~~~ 221 (354)
T 1ys4_A 150 AIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYNG---VP-----SMAILDNLIPFIKNEEEKMQTESLKL 221 (354)
T ss_dssp EEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCTTT---SC-----HHHHTTCCBSCCTTHHHHHHHHHHHH
T ss_pred eEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCccc---cc-----chHHhCCEEeccCchhhHHHHHHHHH
Confidence 69999999999999999999998889999999999999987651 11 24567899999866 33555666
Q ss_pred cccCCC--------ceeEEEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 223 LPALNG--------KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 223 ~~e~~~--------~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
++++.+ +++|+|+|||++|||+.++|++++++++.+|++++|+
T Consensus 222 l~~~~g~~~~~~~~~v~~~~~rvP~~~G~~~~i~~~l~~~~t~eei~~~~~ 272 (354)
T 1ys4_A 222 LGTLKDGKVELANFKISASCNRVAVIDGHTESIFVKTKEGAEPEEIKEVMD 272 (354)
T ss_dssp TSEEETTEEECCCCEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHHHH
T ss_pred HhccccccccCCCceEEEEEEEecccceEEEEEEEEECCCCCHHHHHHHHH
Confidence 665433 6999999999999999999999999999999999884
No 42
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.1e-39 Score=290.91 Aligned_cols=230 Identities=13% Similarity=0.134 Sum_probs=172.3
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
|+||||+|+ ||+|++++|+|.+||++||..+++.+..++.+ ++.||.|. . . + .+ ..
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~------~~~~p~~~-~------~--l-------~~-~~ 69 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKL------EEIFPSTL-E------N--S-------IL-SE 69 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBH------HHHCGGGC-C------C--C-------BC-BC
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCCh------HHhChhhc-c------C--c-------eE-Ee
Confidence 699999999 99999999999999999999999876556543 45566653 1 1 2 12 11
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCC---CC-C-----------CceE---Eee---eCcc
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SK-D-----------APMF---VVG---VNEN 140 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~---~~-~-----------~~~~---v~g---vn~~ 140 (265)
.+++++ | .++|+||+|+|++.++++++.+ +|++.++.|++ ++ + .|.+ +|| +|++
T Consensus 70 ~~~~~~-~--~~~Dvvf~alp~~~s~~~~~~~--~g~~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n~e 144 (351)
T 1vkn_A 70 FDPEKV-S--KNCDVLFTALPAGASYDLVREL--KGVKIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELHRE 144 (351)
T ss_dssp CCHHHH-H--HHCSEEEECCSTTHHHHHHTTC--CSCEEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHHHH
T ss_pred CCHHHh-h--cCCCEEEECCCcHHHHHHHHHh--CCCEEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccCHH
Confidence 222222 1 5799999999999999999988 89855555776 21 1 2222 555 6999
Q ss_pred cccCCCCeEEcCCccchhhhhHHHHHHHhcCee--EEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhh
Q 024629 141 EYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKA 218 (265)
Q Consensus 141 ~i~~~~~~V~~p~C~~ta~~l~L~pL~~~~~i~--~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~ 218 (265)
+|+. +++|+|||||+|+++++|+||+++++|+ ++.+++++++||+++.....+++.+..+...+|++.+ |.+.+|
T Consensus 145 ~i~~-a~iIANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG~~~~~~~~~~e~~~n~~~y~~~~--h~h~pE 221 (351)
T 1vkn_A 145 EIKN-AQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRKEKVDYLFSEVNESLRPYNVAK--HRHVPE 221 (351)
T ss_dssp HHTT-CSEEECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGCSCCSGGGBHHHHTTCCEECSCSC--CTHHHH
T ss_pred Hhcc-CCEEeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccCcccccccchhHHhcccccCCccc--cccHHH
Confidence 9985 8999999999999999999999999998 8889999999999653321122233333334455543 456677
Q ss_pred HhhhcccC---CCceeEEEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 219 VGKVLPAL---NGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 219 ~~~~~~e~---~~~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
+.+.+..+ ..+++|+|+|||++|||+.++|++++ ++.+|++++|+
T Consensus 222 i~~el~~i~~~~~~v~ftp~rvPv~rG~~~tv~v~l~--~~~eei~~~l~ 269 (351)
T 1vkn_A 222 MEQELGKISGKKVNVVFTPHLVPMTRGILSTIYVKTD--KSLEEIHEAYL 269 (351)
T ss_dssp HHHHHHHHHTSCCEEEEEEEEESSSSCEEEEEEEECS--SCHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEEEEeccccEEEEEEEEEEc--CCHHHHHHHHH
Confidence 65544432 23699999999999999999999998 89999999874
No 43
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=8.3e-38 Score=279.51 Aligned_cols=235 Identities=19% Similarity=0.263 Sum_probs=174.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
|+||||+|+|++|++++|+|.+||++||++++++. ....++++.++. ++.+. .. ... .+ +.+..+.+. .
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~--~~~~~~~a~~~g-~~~~~-~~---~~~-~~-~~~~~v~v~--~ 69 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTS--PNYEAFIAHRRG-IRIYV-PQ---QSI-KK-FEESGIPVA--G 69 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSS--CSHHHHHHHHTT-CCEEC-CG---GGH-HH-HHTTTCCCC--C
T ss_pred CeEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCC--hHHHHHHHHhcC-cceec-Cc---CHH-HH-hcccccccc--c
Confidence 47999999999999999999999999999999974 222222222110 00110 00 000 00 000000110 1
Q ss_pred CCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCC--CceEEeeeCcccccCCCCeEEcCCccchhhh
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD--APMFVVGVNENEYKPELNIVSNASCTTNCLA 160 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~--~~~~v~gvn~~~i~~~~~~V~~p~C~~ta~~ 160 (265)
+.+++ ..++|+||+|||++.+++.++.++++|++++++|++..+ .+++++++|.+++.+ .++|+||||++|+++
T Consensus 70 ~~e~l---~~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~-~~iIsnpsCtt~~l~ 145 (340)
T 1b7g_O 70 TVEDL---IKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG-KKYIRVVSCNTTALL 145 (340)
T ss_dssp CHHHH---HHHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT-CSEEEECCHHHHHHH
T ss_pred CHhHh---hcCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC-CCCcccCCcHHHHHH
Confidence 11121 136899999999999999999999999987777887433 468999999776653 579999999999999
Q ss_pred hHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccc----cCChhhhHhhhcccCCCceeEEEEE
Q 024629 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPS----STGAAKAVGKVLPALNGKLTGMAFR 236 (265)
Q Consensus 161 l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~----~~~~~~~~~~~~~e~~~~v~~~~~~ 236 (265)
++|+||+++|||+++.+|++|+.+ | + +.+ .+....|++|. .+++.++..+++|+++ ++++++|
T Consensus 146 ~~lk~L~~~~gI~~~~~tt~~~~~------~-~-~~~---~~~~~~niip~~~~i~t~~a~ev~~vlp~l~--l~~~a~r 212 (340)
T 1b7g_O 146 RTICTVNKVSKVEKVRATIVRRAA------D-Q-KEV---KKGPINSLVPDPATVPSHHAKDVNSVIRNLD--IATMAVI 212 (340)
T ss_dssp HHHHHHHTTSCEEEEEEEEEEESS------C-T-TCC---SCCCSSCCEESSSSSSCTHHHHHHTTSTTCE--EEEEEEE
T ss_pred HHHHHHHHhCCeEEEEEEEEeccC------C-c-ccc---hHHHHcCCCCCCcCCCCCchhHHHHhCCCCc--EEEEEEE
Confidence 999999999999999999999753 2 1 222 34556678866 4567899999999886 9999999
Q ss_pred eeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 237 VPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 237 vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
||+++||+.+++++|++++|.|||+++|+
T Consensus 213 VPv~~gh~~~l~v~l~~~~t~eei~~~l~ 241 (340)
T 1b7g_O 213 APTTLMHMHFINITLKDKVEKKDILSVLE 241 (340)
T ss_dssp ESCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred eccCCeEEEEEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999999884
No 44
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.4e-36 Score=271.45 Aligned_cols=230 Identities=25% Similarity=0.316 Sum_probs=186.1
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeee--cccCccccccee-eeCCceEEECCEEEEE
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQWKHHELK-VKDDKTLLFGEKPVTV 78 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~--~~~~~~~~~~v~-~~~~~~l~~~g~~i~~ 78 (265)
||+||||+|+|++|++++|+|.+||++++++++++. .+...++++++ +.|++|. +.+. .+.+ .+ .+
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~--~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~~-------~v 69 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTK--PDFEAYRAKELGIPVYAASE-EFIPRFEKE-GF-------EV 69 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESS--CSHHHHHHHHTTCCEEESSG-GGHHHHHHH-TC-------CC
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCC--HHHHHHHHHhcCcccccccc-ccceeccCC-ce-------EE
Confidence 158999999999999999999999999999999974 44444555554 5667665 3210 0000 01 11
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCC-C-C-ceEEeeeCcccccCCCCeEEcCCcc
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-D-A-PMFVVGVNENEYKPELNIVSNASCT 155 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~-~-~-~~~v~gvn~~~i~~~~~~V~~p~C~ 155 (265)
. .|++++. .++|+||+|||++.+.+.++.++++|+ +|++|++.+ + . +++|||+|.++++. .++|+||+|+
T Consensus 70 ~--~d~~~l~---~~vDvV~~aTp~~~h~~~a~~~l~aGk-~Vi~sap~~~d~~~~~~v~~vn~~~~~~-~~ii~~~~C~ 142 (334)
T 2czc_A 70 A--GTLNDLL---EKVDIIVDATPGGIGAKNKPLYEKAGV-KAIFQGGEKADVAEVSFVAQANYEAALG-KNYVRVVSCN 142 (334)
T ss_dssp S--CBHHHHH---TTCSEEEECCSTTHHHHHHHHHHHHTC-EEEECTTSCGGGSSEEECHHHHGGGGTT-CSEEEECCHH
T ss_pred c--CcHHHhc---cCCCEEEECCCccccHHHHHHHHHcCC-ceEeecccccccccceEEeccCHHHHhh-CCcEEecCcH
Confidence 1 2344442 379999999999999999999999994 577787743 4 3 58999999999984 7899999999
Q ss_pred chhhhhHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccc---cCChhhhHhhhcccCCCceeE
Q 024629 156 TNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPS---STGAAKAVGKVLPALNGKLTG 232 (265)
Q Consensus 156 ~ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~---~~~~~~~~~~~~~e~~~~v~~ 232 (265)
+++++|++++|.+. |+++.++++|++||. |+++|.+++|++|+ .+++.++..+++| +. ++.
T Consensus 143 t~~l~P~~~~l~~~--I~~g~i~ti~a~s~~-----------~~~~r~~~~niiP~i~~~~g~~~~i~~~l~-l~--l~~ 206 (334)
T 2czc_A 143 TTGLVRTLSAIREY--ADYVYAVMIRRAADP-----------NDTKRGPINAIKPTVEVPSHHGPDVQTVIP-IN--IET 206 (334)
T ss_dssp HHHHHHHHHHHGGG--EEEEEEEEEEESSCT-----------TCCSCCCSSCCEECCSSSCTHHHHHTTTSC-CC--EEE
T ss_pred HHHHHHHHHHHHHH--hccccEEEEEEecCc-----------cccccChhhcEEeccCCCCchhhhhheEEE-EE--EEE
Confidence 99999999999775 999999999999874 34568889999999 7788999999999 76 999
Q ss_pred EEEEeeecceEEEEEEEEeCCCCCHHHHHHHhC
Q 024629 233 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 233 ~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~~~~ 265 (265)
+++|||+++||+.+++++++++++.+|++++|+
T Consensus 207 ~~~rVPv~~~~~~~~~~~~~~~~~~e~i~~~~~ 239 (334)
T 2czc_A 207 MAFVVPTTLMHVHSVMVELKKPLTKDDVIDIFE 239 (334)
T ss_dssp EEEEESCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred EEEEcCCCceEEEEEEEEECCCCCHHHHHHHHH
Confidence 999999999999999999999999999999863
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=99.29 E-value=4.4e-12 Score=111.68 Aligned_cols=210 Identities=20% Similarity=0.183 Sum_probs=118.8
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHc-CCCeEEEEEeccCCC--hhhhhhheeeecccCcccccceeeeCCceEEECCEEE
Q 024629 1 MG-KVKIGINGFGRIGRLVARVILQ-RDDVELVAVNDPFIT--TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPV 76 (265)
Q Consensus 1 m~-~~~V~IiG~G~~G~~l~r~L~~-~p~~el~~i~~~~~~--~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i 76 (265)
|+ ++||||+|+|++|+.+++.|.+ +|++++++++++..+ .+.++. .+ + .
T Consensus 1 M~~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~------~~------------g--~------- 53 (312)
T 1nvm_B 1 MNQKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ------RM------------G--V------- 53 (312)
T ss_dssp CCSCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH------HT------------T--C-------
T ss_pred CCCCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHH------Hc------------C--C-------
Confidence 64 7999999999999999999976 899999999997522 222210 01 1 0
Q ss_pred EEEecCCCCCCCccc---cCccEEEEecCCcccHHHHHHHHhC--CCcEEEE-cCCCCCCceEEeeeCcccccC--CCCe
Q 024629 77 TVFGVRNPEEIPWAE---TGAEYVVESTGVFTDKDKAAAHLKG--GAKKVII-SAPSKDAPMFVVGVNENEYKP--ELNI 148 (265)
Q Consensus 77 ~~~~~~d~~~~~~~~---~~~DvV~~atp~~~~~~~~~~~~~~--g~~~vvi-S~~~~~~~~~v~gvn~~~i~~--~~~~ 148 (265)
.... .+.+++ +.. .++|+||+|||+..+.+++..++++ |+ +|++ +... -.|..++++|.+++.. +.++
T Consensus 54 ~~~~-~~~e~l-l~~~~~~~iDvV~~atp~~~h~~~a~~al~a~~Gk-~Vi~ekp~~-~g~~~~p~v~~~~~~~~~~~~l 129 (312)
T 1nvm_B 54 TTTY-AGVEGL-IKLPEFADIDFVFDATSASAHVQNEALLRQAKPGI-RLIDLTPAA-IGPYCVPVVNLEEHLGKLNVNM 129 (312)
T ss_dssp CEES-SHHHHH-HHSGGGGGEEEEEECSCHHHHHHHHHHHHHHCTTC-EEEECSTTC-SSCBCCHHHHTTTTTTCSEEEC
T ss_pred Cccc-CCHHHH-HhccCCCCCcEEEECCChHHHHHHHHHHHHhCCCC-EEEEcCccc-ccccccCccCHHHHHhccCCcE
Confidence 0001 112221 111 4689999999999999999999998 96 3444 3211 1233445567766642 1257
Q ss_pred EEcCCccchhhhhHHHHHHHhcCeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhhHhhhcccC-C
Q 024629 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPAL-N 227 (265)
Q Consensus 149 V~~p~C~~ta~~l~L~pL~~~~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~~~~~~~e~-~ 227 (265)
++++||...-+..+ +.+.+..... ..+..+++.+ .. + +.....+-++..++ +.+ +.+... .
T Consensus 130 va~~g~~~ipl~~a---~~~~~~~~~~--~iv~~i~sgs--~G-~-------~~~~~l~e~~~~~~--~ai-~~~gg~~~ 191 (312)
T 1nvm_B 130 VTCGGQATIPMVAA---VSRVAKVHYA--EIVASISSKS--AG-P-------GTRANIDEFTETTS--KAI-EVIGGAAK 191 (312)
T ss_dssp CCHHHHHHHHHHHH---HHTTSCEEEE--EEEEEEEGGG--SC-H-------HHHTCHHHHHHHHH--HHH-HHTTCCSS
T ss_pred EEeCCcccchHHHH---hhhhccchhH--hHhhhhhccc--cC-C-------CcccchhhHHHHHH--HHH-HHhhhccC
Confidence 77888855444434 4343333322 1222222111 00 0 00011111121111 112 222211 1
Q ss_pred C--ceeEEEEEeeecceEEEEEEEEeCCCCCHHHHHH
Q 024629 228 G--KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKA 262 (265)
Q Consensus 228 ~--~v~~~~~~vP~~~G~~~~~~~~l~~~~~~~~v~~ 262 (265)
+ .+.|+++..|++ +..++|+.++ ..+.+++.+
T Consensus 192 ~k~il~~~p~~~p~~--~~~tv~~~~~-~~~~~~~~~ 225 (312)
T 1nvm_B 192 GKAIIIMNPAEPPLI--MRDTVYVLSA-AADQAAVAA 225 (312)
T ss_dssp EEEEEEEECCSSCCC--EEEEEEEEES-SCCHHHHHH
T ss_pred CCcEEEEecCCCCcc--cceeEEEEeC-CCCHHHHHH
Confidence 2 367899999999 8889999997 777766554
No 46
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=99.08 E-value=2.9e-10 Score=98.01 Aligned_cols=206 Identities=20% Similarity=0.232 Sum_probs=112.0
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
|+|+||+|+|+ |++|+++++++.++|+++|+++.++..+... . .| .+.+. | + . ..+.++
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~-G----~d--~gel~--------g--~--~-~gv~v~ 64 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQL-G----QD--AGAFL--------G--K--Q-TGVALT 64 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTT-T----SB--TTTTT--------T--C--C-CSCBCB
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccc-c----cc--HHHHh--------C--C--C-CCceec
Confidence 77899999997 9999999999999999999999987532100 0 00 00000 1 0 0 012222
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEc--CCCCCCceEEeeeCcccccCCCCeEEcCCccch
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS--APSKDAPMFVVGVNENEYKPELNIVSNASCTTN 157 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS--~~~~~~~~~v~gvn~~~i~~~~~~V~~p~C~~t 157 (265)
.|.+++ ..++|+||++|++..+.+.+..++++|+. +|++ +.+++.. -.+ +++.++..++-.||-..-
T Consensus 65 --~dl~~l---l~~~DVVIDfT~p~a~~~~~~~al~~G~~-vVigTTG~s~~~~---~~L--~~aa~~~~vv~a~N~s~G 133 (272)
T 4f3y_A 65 --DDIERV---CAEADYLIDFTLPEGTLVHLDAALRHDVK-LVIGTTGFSEPQK---AQL--RAAGEKIALVFSANMSVG 133 (272)
T ss_dssp --CCHHHH---HHHCSEEEECSCHHHHHHHHHHHHHHTCE-EEECCCCCCHHHH---HHH--HHHTTTSEEEECSCCCHH
T ss_pred --CCHHHH---hcCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEEECCCCCHHHH---HHH--HHHhccCCEEEECCCCHH
Confidence 344443 24689999999999999999999999964 5552 2221100 000 111113456777665532
Q ss_pred h--hhhHHHHHHHhc----CeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhh---Hhh--hccc-
Q 024629 158 C--LAPLAKVIHDKF----GIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKA---VGK--VLPA- 225 (265)
Q Consensus 158 a--~~l~L~pL~~~~----~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~---~~~--~~~e- 225 (265)
. +.-.++-+.+.+ .++ .+...|. ...|.||++....+..++.+. .....+ +.| +..+
T Consensus 134 v~l~~~~~~~aa~~l~~~~die--i~E~HH~-----~K~DaPSGTA~~la~~i~~~~----~~~~~~~~~~~r~g~~g~r 202 (272)
T 4f3y_A 134 VNVTMKLLEFAAKQFAQGYDIE--IIEAHHR-----HKVDAPSGTALMMGETIAAAT----GRSLDDCAVYGRHGVTGER 202 (272)
T ss_dssp HHHHHHHHHHHHHHTSSSCEEE--EEEEECT-----TCCSSSCHHHHHHHHHHHHTT----TCCHHHHEEECCCSCCCSC
T ss_pred HHHHHHHHHHHHHhcCcCCCEE--EEEecCC-----CCCCCCCHHHHHHHHHHHHHh----CcccccccccccccccCCC
Confidence 2 222222233333 233 2245555 358988876544443332211 000000 000 1111
Q ss_pred CCCceeEEEEEeeecceEEEEEE
Q 024629 226 LNGKLTGMAFRVPTVDVSVVDLT 248 (265)
Q Consensus 226 ~~~~v~~~~~~vP~~~G~~~~~~ 248 (265)
-...+-++++|.|-.-|+-..++
T Consensus 203 ~~~~i~i~s~R~g~ivg~h~v~f 225 (272)
T 4f3y_A 203 DPSTIGFSAIRGGDIVGDHTVLF 225 (272)
T ss_dssp CTTCEEEEEEECTTCCEEEEEEE
T ss_pred CCCccCEEEEECCCCceEEEEEE
Confidence 12358889999998888765554
No 47
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=99.01 E-value=1.2e-09 Score=92.64 Aligned_cols=189 Identities=14% Similarity=0.121 Sum_probs=104.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
|+|+||+|+|+|++|+.+++.+.++|+ +|+++.++..+.. .+ +.++
T Consensus 1 M~MmkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~~~~~-----------------------~g---------v~v~- 46 (243)
T 3qy9_A 1 MASMKILLIGYGAMNQRVARLAEEKGH-EIVGVIENTPKAT-----------------------TP---------YQQY- 46 (243)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSSCC-------------------------CC---------SCBC-
T ss_pred CCceEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecCcccc-----------------------CC---------Ccee-
Confidence 778999999999999999999999999 9999988742210 01 1122
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE-c-CCCCCCceEEeeeCcccccCCCCeEEcCCccc--
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII-S-APSKDAPMFVVGVNENEYKPELNIVSNASCTT-- 156 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi-S-~~~~~~~~~v~gvn~~~i~~~~~~V~~p~C~~-- 156 (265)
.|++++ . ++|+|+|+|.+....+.++ +++|+. +|+ + +.+++.- -.+ +++.++..++-.||-..
T Consensus 47 -~dl~~l---~-~~DVvIDft~p~a~~~~~~--l~~g~~-vVigTTG~s~e~~---~~l--~~aa~~~~v~~a~N~S~Gv 113 (243)
T 3qy9_A 47 -QHIADV---K-GADVAIDFSNPNLLFPLLD--EDFHLP-LVVATTGEKEKLL---NKL--DELSQNMPVFFSANMSYGV 113 (243)
T ss_dssp -SCTTTC---T-TCSEEEECSCHHHHHHHHT--SCCCCC-EEECCCSSHHHHH---HHH--HHHTTTSEEEECSSCCHHH
T ss_pred -CCHHHH---h-CCCEEEEeCChHHHHHHHH--HhcCCc-eEeCCCCCCHHHH---HHH--HHHHhcCCEEEECCccHHH
Confidence 356665 2 7899999988877777776 778864 445 2 2211100 000 11112345677776552
Q ss_pred hhhhhHHHHHHHhc---CeeEEEEEEEeeccccccccCCCCCccccCcccc-----ccccccccCChhhhHhhhcccCCC
Q 024629 157 NCLAPLAKVIHDKF---GIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAA-----SFNIIPSSTGAAKAVGKVLPALNG 228 (265)
Q Consensus 157 ta~~l~L~pL~~~~---~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~-----~~n~~p~~~~~~~~~~~~~~e~~~ 228 (265)
+.+.-.++-+.+.+ .++ .+...|. ...|.||++....+..+ .++..+.+.+. .-+.-..
T Consensus 114 ~l~~~~~~~aa~~l~~~die--I~E~HH~-----~K~DaPSGTA~~la~~i~~~~~~~~~~~~r~~~------~~~r~~~ 180 (243)
T 3qy9_A 114 HALTKILAAAVPLLDDFDIE--LTEAHHN-----KKVDAPSGTLEKLYDVIVSLKENVTPVYDRHEL------NEKRQPQ 180 (243)
T ss_dssp HHHHHHHHHHHHHTTTSEEE--EEEEECT-----TCCSSSCHHHHHHHHHHHHHSTTCEEECCCTTT------CCCCCTT
T ss_pred HHHHHHHHHHHHhcCCCCEE--EEEcCCC-----CCCCCCCHHHHHHHHHHHhcCcccccccccccc------cCCccCC
Confidence 22222223333332 343 2245555 36898887654433332 11111111110 0011123
Q ss_pred ceeEEEEEeeecceEEEEEEE
Q 024629 229 KLTGMAFRVPTVDVSVVDLTV 249 (265)
Q Consensus 229 ~v~~~~~~vP~~~G~~~~~~~ 249 (265)
.+-++++|.|-.-|+-..++.
T Consensus 181 ~i~i~s~R~g~ivg~h~v~f~ 201 (243)
T 3qy9_A 181 DIGIHSIRGGTIVGEHEVLFA 201 (243)
T ss_dssp EEEEEEEECTTCCEEEEEEEE
T ss_pred cceEEEEECCCCcEEEEEEEc
Confidence 578899999988887655543
No 48
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=98.88 E-value=1.1e-09 Score=94.92 Aligned_cols=203 Identities=22% Similarity=0.162 Sum_probs=111.8
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCC---hhhhhhheeeecccCcccccceeeeCCceEEECCEEEE
Q 024629 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFIT---TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (265)
Q Consensus 2 ~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~---~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~ 77 (265)
+++||+|+|+ |++|+.+++.+.++|+++|+++.++..+ ++.+. .+. | + ....+.
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~g----------el~--------G--~--~~~gv~ 77 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDAS----------ILI--------G--S--DFLGVR 77 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGG----------GGT--------T--C--SCCSCB
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchH----------Hhh--------c--c--CcCCce
Confidence 3689999997 9999999999999999999999987532 11110 000 1 0 000122
Q ss_pred EEecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE--cCCCCCCceEEeeeCcccccCCCCeEEcCCcc
Q 024629 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII--SAPSKDAPMFVVGVNENEYKPELNIVSNASCT 155 (265)
Q Consensus 78 ~~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi--S~~~~~~~~~v~gvn~~~i~~~~~~V~~p~C~ 155 (265)
++ .|++++ ..++|+|+|+|++....+.+..++++|+. +|+ ++.+++.. ..+ +++.++..++-.||-.
T Consensus 78 v~--~dl~~l---l~~aDVvIDFT~p~a~~~~~~~~l~~Gv~-vViGTTG~~~e~~---~~L--~~aa~~~~~~~a~N~S 146 (288)
T 3ijp_A 78 IT--DDPESA---FSNTEGILDFSQPQASVLYANYAAQKSLI-HIIGTTGFSKTEE---AQI--ADFAKYTTIVKSGNMS 146 (288)
T ss_dssp CB--SCHHHH---TTSCSEEEECSCHHHHHHHHHHHHHHTCE-EEECCCCCCHHHH---HHH--HHHHTTSEEEECSCCC
T ss_pred ee--CCHHHH---hcCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEEECCCCCHHHH---HHH--HHHhCcCCEEEECCCc
Confidence 32 355553 24799999999999999999999999974 445 22221100 000 1111134577777765
Q ss_pred chh--hhhHHHHHHHhc----CeeEEEEEEEeeccccccccCCCCCccccCccccccccccccCChhhh---Hhh--hcc
Q 024629 156 TNC--LAPLAKVIHDKF----GIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKA---VGK--VLP 224 (265)
Q Consensus 156 ~ta--~~l~L~pL~~~~----~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p~~~~~~~~---~~~--~~~ 224 (265)
.-. +.-.++-+.+.+ .++ .+...|. ...|.||++....+..++.+. .....+ +.| +..
T Consensus 147 iGv~ll~~l~~~aa~~l~~~~die--IiE~HH~-----~K~DaPSGTA~~la~~i~~~~----~~~~~~~~~~~r~g~~g 215 (288)
T 3ijp_A 147 LGVNLLANLVKRAAKALDDDFDIE--IYEMHHA-----NKVDSPSGTALLLGQAAAEGR----NIMLKNVSVNGRSGHTG 215 (288)
T ss_dssp HHHHHHHHHHHHHHHHSCTTSEEE--EEEEECT-----TCCCSSCHHHHHHHHHHHHHT----TSCHHHHEEECGGGCCS
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEE--EEEccCC-----CCCCCCCHHHHHHHHHHHHHh----CCCcccccccccccccC
Confidence 332 222222233333 233 2244555 368988876544443332211 000000 001 111
Q ss_pred c-CCCceeEEEEEeeecceEEEEEE
Q 024629 225 A-LNGKLTGMAFRVPTVDVSVVDLT 248 (265)
Q Consensus 225 e-~~~~v~~~~~~vP~~~G~~~~~~ 248 (265)
+ -...+-++++|.|-.-|+-..++
T Consensus 216 ~r~~~~i~i~s~R~g~ivg~h~V~f 240 (288)
T 3ijp_A 216 KREKGTIGFACSRGGTVIGDHSITF 240 (288)
T ss_dssp CCCTTCEEEEEEECTTCCEEEEEEE
T ss_pred CcCCCCccEEEEECCCCCEEEEEEe
Confidence 1 12358889999998888665544
No 49
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.84 E-value=4.1e-09 Score=93.75 Aligned_cols=92 Identities=20% Similarity=0.246 Sum_probs=67.4
Q ss_pred CccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 2 GKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~-l~r~L~~~p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
+|+||||||+|.+|+. +++.+.+.|+++|++|+|+..+ .+.++ . +| + + ...+
T Consensus 22 ~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a------~---~~---------g--~------~~~y 75 (350)
T 4had_A 22 SMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMA------D---RF---------S--V------PHAF 75 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHH------H---HH---------T--C------SEEE
T ss_pred CccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHH------H---Hc---------C--C------Ceee
Confidence 4799999999999986 5788999999999999998422 12111 0 01 1 0 0122
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 76 --~d~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~ 115 (350)
T 4had_A 76 --GSYEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAG-KHVVC 115 (350)
T ss_dssp --SSHHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred --CCHHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcC-CEEEE
Confidence 345554 33467999999999999999999999999 56776
No 50
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=98.84 E-value=3.8e-08 Score=84.90 Aligned_cols=204 Identities=18% Similarity=0.226 Sum_probs=110.3
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
|+++||+|+|+ |++|+.+++.+.++|+++|+++.++..+... . .| .+.+. + + ....+.+.
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~-g----~d--~~~~~--------g--~--~~~~v~~~ 63 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLL-G----SD--AGELA--------G--A--GKTGVTVQ 63 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTC-S----CC--TTCSS--------S--S--SCCSCCEE
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhh-h----hh--HHHHc--------C--C--CcCCceec
Confidence 34689999999 9999999999999999999999887432100 0 00 00000 0 0 00012232
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCCCceEEeeeCcc------cccCCCCeEEcCC
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEN------EYKPELNIVSNAS 153 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~~~~~v~gvn~~------~i~~~~~~V~~p~ 153 (265)
.|++++ ..++|+|+|+|++....+.+..++++|+. +|+.+. |++.+ ++.++..++-.||
T Consensus 64 --~dl~~~---l~~~DvVIDft~p~~~~~~~~~a~~~G~~-vVigTt---------G~~~e~~~~L~~~a~~~~vv~a~N 128 (273)
T 1dih_A 64 --SSLDAV---KDDFDVFIDFTRPEGTLNHLAFCRQHGKG-MVIGTT---------GFDEAGKQAIRDAAADIAIVFAAN 128 (273)
T ss_dssp --SCSTTT---TTSCSEEEECSCHHHHHHHHHHHHHTTCE-EEECCC---------CCCHHHHHHHHHHTTTSCEEECSC
T ss_pred --CCHHHH---hcCCCEEEEcCChHHHHHHHHHHHhCCCC-EEEECC---------CCCHHHHHHHHHhcCCCCEEEEec
Confidence 455554 24799999999998899999999999964 555222 11111 1112234555554
Q ss_pred cc--chhhhhHHHHHHHh----cCeeEEEEEEEeeccccccccCCCCCccccCcccccccccc-----ccCChhhhHhhh
Q 024629 154 CT--TNCLAPLAKVIHDK----FGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIP-----SSTGAAKAVGKV 222 (265)
Q Consensus 154 C~--~ta~~l~L~pL~~~----~~i~~~~~~~~~~~sg~~~~~d~~~~~~~~~g~~~~~n~~p-----~~~~~~~~~~~~ 222 (265)
-. ++.+.-.+.-+.+. |.++ .+...|. ..+|.||++....+..++...-. ...+ ++ .+
T Consensus 129 ~siGvn~~~~l~~~aa~~~~~~~die--iiE~Hh~-----~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~--r~--~~ 197 (273)
T 1dih_A 129 FSVGVNVMLKLLEKAAKVMGDYTDIE--IIEAHHR-----HKVDAPSGTALAMGEAIAHALDKDLKDCAVYS--RE--GH 197 (273)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTTSEEE--EEEEECT-----TCCSSSCHHHHHHHHHHHHHTTCCGGGTEECC--CC--SC
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCCEE--EEEeecC-----CCCCCCCHHHHHHHHHHHHhhCCCcccccccc--cc--Cc
Confidence 33 22222222222232 2333 2245555 35788887544433333221100 0000 00 01
Q ss_pred ccc-CCCceeEEEEEeeecceEEEEEEE
Q 024629 223 LPA-LNGKLTGMAFRVPTVDVSVVDLTV 249 (265)
Q Consensus 223 ~~e-~~~~v~~~~~~vP~~~G~~~~~~~ 249 (265)
..+ -...+-++++|.|-..|+-..+++
T Consensus 198 ~~~r~~~~i~i~s~R~g~vvg~h~v~f~ 225 (273)
T 1dih_A 198 TGERVPGTIGFATVRAGDIVGEHTAMFA 225 (273)
T ss_dssp CCSCCTTCEEEEEEECTTCCEEEEEEEE
T ss_pred cCCCCCCcceEEEEeCCCCCccEEEEEc
Confidence 111 123578899999999997665553
No 51
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.82 E-value=5.9e-09 Score=93.64 Aligned_cols=93 Identities=19% Similarity=0.190 Sum_probs=65.2
Q ss_pred CCccEEEEEccChhHHHHHHHHHc-------CCCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEEC
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQ-------RDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG 72 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~-------~p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~ 72 (265)
|+++||||||+|.+|+..++.+.. .|+++|++|+|+... .+.++. .| + +
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~---------~~---------g--~--- 79 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAG---------EF---------G--F--- 79 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHH---------HH---------T--C---
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHH---------Hh---------C--C---
Confidence 678999999999999988876643 478899999998533 222210 01 1 0
Q ss_pred CEEEEEEecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 73 EKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 73 g~~i~~~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
..++ .|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 80 ---~~~y--~d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aG-khVl~ 123 (393)
T 4fb5_A 80 ---EKAT--ADWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAG-KHVWC 123 (393)
T ss_dssp ---SEEE--SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred ---Ceec--CCHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcC-CeEEE
Confidence 0122 344544 33467999999999999999999999999 56766
No 52
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.81 E-value=8.4e-09 Score=92.27 Aligned_cols=91 Identities=22% Similarity=0.329 Sum_probs=67.7
Q ss_pred CCccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~-l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
|+++||||+|+|.+|+. +++.+.++|+++|++++++. .+..+. .++ + ...+
T Consensus 3 m~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~~------~~~-----------~---------~~~~ 54 (358)
T 3gdo_A 3 LDTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSR--TEEVKR------DFP-----------D---------AEVV 54 (358)
T ss_dssp TTCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSC--HHHHHH------HCT-----------T---------SEEE
T ss_pred CCcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCC--HHHHHh------hCC-----------C---------CceE
Confidence 44799999999999997 88999999999999999984 222210 000 1 1122
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 55 --~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~ 94 (358)
T 3gdo_A 55 --HELEEI-TNDPAIELVIVTTPSGLHYEHTMACIQAG-KHVVM 94 (358)
T ss_dssp --SSTHHH-HTCTTCCEEEECSCTTTHHHHHHHHHHTT-CEEEE
T ss_pred --CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHcC-CeEEE
Confidence 345554 23357999999999999999999999999 56766
No 53
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.80 E-value=1.8e-08 Score=88.87 Aligned_cols=89 Identities=20% Similarity=0.282 Sum_probs=67.5
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
|+++||+|+|+|.+|+.+++.|.++|+++++++.++.... .+ + .+ +..+
T Consensus 1 M~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~-~~---------------~-----~g---------v~~~- 49 (320)
T 1f06_A 1 MTNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL-DT---------------K-----TP---------VFDV- 49 (320)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC-SS---------------S-----SC---------EEEG-
T ss_pred CCCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH-hh---------------c-----CC---------Ccee-
Confidence 8889999999999999999999999999999999874211 10 0 01 2222
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcC
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~ 125 (265)
.|.+++ ..++|+||+|+|+..+.+.+..++++|. +++++.
T Consensus 50 -~d~~~l---l~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ek 89 (320)
T 1f06_A 50 -ADVDKH---ADDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTY 89 (320)
T ss_dssp -GGGGGT---TTTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCC
T ss_pred -CCHHHH---hcCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECC
Confidence 344444 1579999999999999999999999995 466543
No 54
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.80 E-value=1.1e-08 Score=91.53 Aligned_cols=91 Identities=21% Similarity=0.328 Sum_probs=67.6
Q ss_pred CCccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~-l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
|+++||||+|+|.+|+. .++.|.++|+++|++++++... ..+ . .|. + ...+
T Consensus 3 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~--~~~------~---~~~--------~---------~~~~ 54 (362)
T 3fhl_A 3 LEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKE--LSK------E---RYP--------Q---------ASIV 54 (362)
T ss_dssp CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCC--GGG------T---TCT--------T---------SEEE
T ss_pred CCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHH--HHH------H---hCC--------C---------CceE
Confidence 34699999999999997 8899999999999999998522 111 0 010 1 1222
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 55 --~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~ 94 (362)
T 3fhl_A 55 --RSFKEL-TEDPEIDLIVVNTPDNTHYEYAGMALEAG-KNVVV 94 (362)
T ss_dssp --SCSHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred --CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEE
Confidence 355554 23356999999999999999999999999 56766
No 55
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.79 E-value=7.1e-09 Score=90.83 Aligned_cols=88 Identities=18% Similarity=0.226 Sum_probs=62.4
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
|+++||||+|+|.+|+.+++.|.++|++++++++++..+ ... . .| + ....+
T Consensus 7 M~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~--~~~------~-------------~g--~-----~~~~~- 57 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPA--EVP------F-------------EL--Q-----PFRVV- 57 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------------------------CC--T-----TSCEE-
T ss_pred CCCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHH--HHH------H-------------cC--C-----CcCCH-
Confidence 447999999999999999999999999999999987421 110 0 01 0 00011
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.+..+. .++|+||+|||+..+.+.+..++++|+ ++++
T Consensus 58 -~~l~~~----~~~DvViiatp~~~h~~~~~~al~aG~-~Vi~ 94 (304)
T 3bio_A 58 -SDIEQL----ESVDVALVCSPSREVERTALEILKKGI-CTAD 94 (304)
T ss_dssp -SSGGGS----SSCCEEEECSCHHHHHHHHHHHHTTTC-EEEE
T ss_pred -HHHHhC----CCCCEEEECCCchhhHHHHHHHHHcCC-eEEE
Confidence 222222 479999999999999999999999995 4554
No 56
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=98.78 E-value=5.9e-09 Score=92.31 Aligned_cols=86 Identities=22% Similarity=0.234 Sum_probs=66.8
Q ss_pred CCccEEEEEccChhHH-HHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~-~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
|+++||||+|+|.+|+ ..++.|.++|+++|++++++..+. + + ++.+
T Consensus 23 M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~---------------~---------g---------~~~~ 69 (330)
T 4ew6_A 23 MSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV---------------E---------G---------VNSY 69 (330)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC---------------T---------T---------SEEE
T ss_pred CCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh---------------c---------C---------CCcc
Confidence 6679999999999999 799999999999999999974211 0 1 1122
Q ss_pred ecCCCCCCCccc-cCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 80 GVRNPEEIPWAE-TGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~d~~~~~~~~-~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|.+++ +.. .++|+|+.|||+..+.+++..++++| |+|++
T Consensus 70 --~~~~~l-l~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~ 110 (330)
T 4ew6_A 70 --TTIEAM-LDAEPSIDAVSLCMPPQYRYEAAYKALVAG-KHVFL 110 (330)
T ss_dssp --SSHHHH-HHHCTTCCEEEECSCHHHHHHHHHHHHHTT-CEEEE
T ss_pred --CCHHHH-HhCCCCCCEEEEeCCcHHHHHHHHHHHHcC-CcEEE
Confidence 244444 222 46999999999999999999999999 56666
No 57
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.78 E-value=6.9e-09 Score=92.88 Aligned_cols=92 Identities=21% Similarity=0.330 Sum_probs=67.1
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
|+++||||+|+|.+|+..++.|.++|+++|++++++..+....+ . ..+ +..+
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a------~------------~~g---------~~~~- 54 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAA------A------------QKG---------LKIY- 54 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHH------H------------TTT---------CCBC-
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHH------H------------hcC---------Ccee-
Confidence 44689999999999999999999999999999999742211110 0 001 1111
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|++++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~ 94 (359)
T 3e18_A 55 -ESYEAV-LADEKVDAVLIATPNDSHKELAISALEAG-KHVVC 94 (359)
T ss_dssp -SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred -CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEe
Confidence 234443 22347999999999999999999999999 56666
No 58
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=98.77 E-value=2.7e-09 Score=95.79 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=67.6
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCe-------EEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEEC
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDV-------ELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG 72 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~-------el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~ 72 (265)
|+++||||||+|.+|+..++.+.+.|.+ +|++|+++..+ .+..+ . +| + +
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a------~---~~---------g--~--- 60 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAA------G---KL---------G--W--- 60 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHH------H---HH---------T--C---
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHH------H---Hc---------C--C---
Confidence 8889999999999999999998877654 99999998422 11111 0 01 1 0
Q ss_pred CEEEEEEecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 73 EKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 73 g~~i~~~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
..++ .|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 61 ---~~~~--~d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~ 104 (390)
T 4h3v_A 61 ---STTE--TDWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAG-KHVLC 104 (390)
T ss_dssp ---SEEE--SCHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred ---Cccc--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CCcee
Confidence 0122 344444 33467999999999999999999999999 56777
No 59
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.75 E-value=1.2e-08 Score=90.17 Aligned_cols=93 Identities=19% Similarity=0.261 Sum_probs=65.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCCh-hhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~-~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
|+++||||+|+|.+|+.+++.|.+.|++++++++++.... +.++ . ..+ + . ..+
T Consensus 3 m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a------~------------~~~--~--~----~~~ 56 (329)
T 3evn_A 3 LSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFA------N------------KYH--L--P----KAY 56 (329)
T ss_dssp --CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---------------------CCC--C--S----CEE
T ss_pred CCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH------H------------HcC--C--C----ccc
Confidence 3578999999999999999999988999999999875321 1110 0 001 0 0 122
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|.+++ +...++|+|+.|||+..+.+.+..++++| |++++
T Consensus 57 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~ 96 (329)
T 3evn_A 57 --DKLEDM-LADESIDVIYVATINQDHYKVAKAALLAG-KHVLV 96 (329)
T ss_dssp --SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred --CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CeEEE
Confidence 244444 22247999999999999999999999999 55666
No 60
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.75 E-value=9.9e-09 Score=91.55 Aligned_cols=92 Identities=12% Similarity=0.151 Sum_probs=66.3
Q ss_pred CCccEEEEEccChhHH-HHHHHHHcCCCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~-~l~r~L~~~p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
|+++||||||+|.+|+ .+++.|.++|+++|++++++..+ .+.++ . .| | +..
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a------~---~~---------g---------~~~ 77 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFT------E---RF---------G---------GEP 77 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHH------H---HH---------C---------SEE
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHH------H---Hc---------C---------CCC
Confidence 5679999999999998 79999999999999999997422 11111 0 00 1 112
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+ .|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 78 ~--~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~ 118 (350)
T 3rc1_A 78 V--EGYPAL-LERDDVDAVYVPLPAVLHAEWIDRALRAG-KHVLA 118 (350)
T ss_dssp E--ESHHHH-HTCTTCSEEEECCCGGGHHHHHHHHHHTT-CEEEE
T ss_pred c--CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CcEEE
Confidence 2 234443 22347999999999999999999999999 55666
No 61
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=98.74 E-value=1.5e-08 Score=90.34 Aligned_cols=93 Identities=22% Similarity=0.306 Sum_probs=67.7
Q ss_pred CccEEEEEccChhHH-HHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 2 GKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~-~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
||+||||+|+|.+|+ ..++.+.++|+++|++|+++. ..+.++.. ++. .+ +..+
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~------~~~---------~~---------~~~~- 54 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAP------FKE---------KG---------VNFT- 54 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHH------HHT---------TT---------CEEE-
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHh------hCC---------CC---------CeEE-
Confidence 259999999999998 688889899999999999985 33322210 000 01 1232
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~ 94 (349)
T 3i23_A 55 -ADLNEL-LTDPEIELITICTPAHTHYDLAKQAILAG-KSVIV 94 (349)
T ss_dssp -SCTHHH-HSCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred -CCHHHH-hcCCCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEE
Confidence 355554 33356999999999999999999999999 56766
No 62
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.74 E-value=3e-08 Score=88.41 Aligned_cols=91 Identities=24% Similarity=0.451 Sum_probs=67.3
Q ss_pred CC-ccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 1 MG-KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~-~~~V~IiG~G~~G~~-l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
|+ ++||||+|+|.+|+. +++.+.++|+++|++|+++. .+... . .+. + ..+
T Consensus 4 M~~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~--~~~~~------~---~~~--------~---------~~~ 55 (352)
T 3kux_A 4 MADKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSD--ASKVH------A---DWP--------A---------IPV 55 (352)
T ss_dssp TTCCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSC--HHHHH------T---TCS--------S---------CCE
T ss_pred ccCCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCC--HHHHH------h---hCC--------C---------Cce
Confidence 54 699999999999997 89999999999999999974 22211 0 010 1 112
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+ .|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 56 ~--~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~ 96 (352)
T 3kux_A 56 V--SDPQML-FNDPSIDLIVIPTPNDTHFPLAQSALAAG-KHVVV 96 (352)
T ss_dssp E--SCHHHH-HHCSSCCEEEECSCTTTHHHHHHHHHHTT-CEEEE
T ss_pred E--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEE
Confidence 2 344444 22356999999999999999999999999 56776
No 63
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.73 E-value=2.4e-08 Score=89.39 Aligned_cols=94 Identities=19% Similarity=0.252 Sum_probs=66.9
Q ss_pred CCccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~-l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
|+++||||||+|.+|+. +++.|.++|++++++++++. .+....+ ...|. + ..++
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~~~------a~~~~--------~---------~~~~ 57 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSD--LERARRV------HRFIS--------D---------IPVL 57 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSS--HHHHGGG------GGTSC--------S---------CCEE
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCC--HHHHHHH------HHhcC--------C---------Cccc
Confidence 44689999999999996 89999999999999999984 2221100 00010 0 1122
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|++++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 58 --~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~ 97 (359)
T 3m2t_A 58 --DNVPAM-LNQVPLDAVVMAGPPQLHFEMGLLAMSKG-VNVFV 97 (359)
T ss_dssp --SSHHHH-HHHSCCSEEEECSCHHHHHHHHHHHHHTT-CEEEE
T ss_pred --CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CeEEE
Confidence 344444 22346899999999999999999999999 56666
No 64
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.72 E-value=2e-08 Score=89.74 Aligned_cols=94 Identities=23% Similarity=0.232 Sum_probs=67.5
Q ss_pred CCccEEEEEccChhHHHHHHHHH-cCCCeEEEEEeccCCCh-hhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 1 MGKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~-~~p~~el~~i~~~~~~~-~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
|+++||||||+|.+|+..++.|. .+|++++++++++..+. +..+ ..+ + + ....
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a------~~~------------g--~-----~~~~ 75 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAAL------DKY------------A--I-----EAKD 75 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHH------HHH------------T--C-----CCEE
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHH------HHh------------C--C-----CCee
Confidence 67899999999999999999998 78999999999985332 1111 000 1 0 0112
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+ .|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 76 ~--~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~ 116 (357)
T 3ec7_A 76 Y--NDYHDL-INDKDVEVVIITASNEAHADVAVAALNAN-KYVFC 116 (357)
T ss_dssp E--SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred e--CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEe
Confidence 2 244443 22246899999999999999999999999 56666
No 65
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.71 E-value=2.5e-08 Score=89.42 Aligned_cols=89 Identities=25% Similarity=0.330 Sum_probs=65.8
Q ss_pred ccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~-l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
++||||+|+|.+|+. +++.+.++|+++|++++++. .+... .. +. + ...+
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~------~~---~~--------~---------~~~~-- 56 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRD--EEKVK------RD---LP--------D---------VTVI-- 56 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSC--HHHHH------HH---CT--------T---------SEEE--
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCC--HHHHH------hh---CC--------C---------CcEE--
Confidence 689999999999997 88999999999999999984 22211 00 00 1 1122
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 57 ~~~~~l-l~~~~~D~V~i~tp~~~H~~~~~~al~aG-k~Vl~ 96 (364)
T 3e82_A 57 ASPEAA-VQHPDVDLVVIASPNATHAPLARLALNAG-KHVVV 96 (364)
T ss_dssp SCHHHH-HTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEE
Confidence 244444 22357999999999999999999999999 56666
No 66
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.70 E-value=2.7e-08 Score=88.44 Aligned_cols=91 Identities=15% Similarity=0.235 Sum_probs=65.8
Q ss_pred ccEEEEEccChhHHH-HHH-HHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 3 KVKIGINGFGRIGRL-VAR-VILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~-l~r-~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
|+||||+|+|.+|+. .++ ++..+|+++|++++++..+....+ ..+. + +.++
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~---------~~~~--------~---------~~~~- 54 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQA---------PIYS--------H---------IHFT- 54 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGS---------GGGT--------T---------CEEE-
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHH---------HhcC--------C---------CceE-
Confidence 589999999999996 778 667889999999999853321100 0010 1 1232
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|++++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~ 94 (345)
T 3f4l_A 55 -SDLDEV-LNDPDVKLVVVCTHADSHFEYAKRALEAG-KNVLV 94 (345)
T ss_dssp -SCTHHH-HTCTTEEEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred -CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHcC-CcEEE
Confidence 355554 22346999999999999999999999999 56666
No 67
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.70 E-value=2.6e-08 Score=88.42 Aligned_cols=92 Identities=26% Similarity=0.442 Sum_probs=66.2
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCCh-hhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~-~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~-~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
|+ |+||||+|+|.+|+.+++.|.++|++++++++++..+. +.++ ..+ + ...
T Consensus 1 M~~~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a------~~~------------g---------~~~ 53 (344)
T 3euw_A 1 MSLTLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLA------EAN------------G---------AEA 53 (344)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHH------HTT------------T---------CEE
T ss_pred CCCceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHH------HHc------------C---------Cce
Confidence 64 68999999999999999999999999999999984221 1111 000 1 112
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+ .|++++ +...++|+|+.|||+..+.+.+..++++| |++++
T Consensus 54 ~--~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~ 94 (344)
T 3euw_A 54 V--ASPDEV-FARDDIDGIVIGSPTSTHVDLITRAVERG-IPALC 94 (344)
T ss_dssp E--SSHHHH-TTCSCCCEEEECSCGGGHHHHHHHHHHTT-CCEEE
T ss_pred e--CCHHHH-hcCCCCCEEEEeCCchhhHHHHHHHHHcC-CcEEE
Confidence 2 234443 22247999999999999999999999999 45666
No 68
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.69 E-value=1.6e-08 Score=89.36 Aligned_cols=93 Identities=15% Similarity=0.177 Sum_probs=66.9
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCCh-hhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~-~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
|+++||||+|+|.+|+.+++.|.++|+++++++.++..+. +..+ ..+ + + ...+
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~------~~~------------~--~------~~~~ 56 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMA------KEL------------A--I------PVAY 56 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHH------HHT------------T--C------CCCB
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHH------HHc------------C--C------Ccee
Confidence 4568999999999999999999999999999999985321 1111 001 1 0 0011
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|.+++ +...++|+|+.|||+..+.+.+..++++| |++++
T Consensus 57 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~ 96 (330)
T 3e9m_A 57 --GSYEEL-CKDETIDIIYIPTYNQGHYSAAKLALSQG-KPVLL 96 (330)
T ss_dssp --SSHHHH-HHCTTCSEEEECCCGGGHHHHHHHHHHTT-CCEEE
T ss_pred --CCHHHH-hcCCCCCEEEEcCCCHHHHHHHHHHHHCC-CeEEE
Confidence 233333 22247899999999999999999999999 45666
No 69
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.68 E-value=2.2e-08 Score=89.27 Aligned_cols=91 Identities=14% Similarity=0.189 Sum_probs=66.3
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
+++||||+|+|.+|+.+++.|.++|++++++++++..+ .+..+ .. + + + +.+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~------~~---~---------g--~-------~~~- 55 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFG------KR---Y---------N--C-------AGD- 55 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHH------HH---H---------T--C-------CCC-
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHH------HH---c---------C--C-------CCc-
Confidence 46899999999999999999999999999999998422 11111 00 0 1 0 111
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|++++ +...++|+|+.|||+..+.+.+..++++| |++++
T Consensus 56 -~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~ 95 (354)
T 3db2_A 56 -ATMEAL-LAREDVEMVIITVPNDKHAEVIEQCARSG-KHIYV 95 (354)
T ss_dssp -SSHHHH-HHCSSCCEEEECSCTTSHHHHHHHHHHTT-CEEEE
T ss_pred -CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CEEEE
Confidence 233333 22257999999999999999999999999 55666
No 70
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.68 E-value=1.9e-08 Score=87.94 Aligned_cols=90 Identities=18% Similarity=0.256 Sum_probs=65.5
Q ss_pred CCccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~-l~r~L~~~p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
|+++||||+|+|.+|+. +++.|.++|++++++++++..+ .+.++ ..+ + + ..
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a------~~~------------~--~-------~~ 56 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKIC------SDY------------R--I-------MP 56 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHH------HHH------------T--C-------CB
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHH------HHc------------C--C-------CC
Confidence 66899999999999996 9999999999999999998422 11111 000 1 0 11
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+ .|.+++ + .++|+|+.|||+..+.+.+..++++| |++++
T Consensus 57 ~--~~~~~l-l--~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~ 95 (308)
T 3uuw_A 57 F--DSIESL-A--KKCDCIFLHSSTETHYEIIKILLNLG-VHVYV 95 (308)
T ss_dssp C--SCHHHH-H--TTCSEEEECCCGGGHHHHHHHHHHTT-CEEEE
T ss_pred c--CCHHHH-H--hcCCEEEEeCCcHhHHHHHHHHHHCC-CcEEE
Confidence 1 244443 1 37899999999999999999999999 45666
No 71
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.65 E-value=3.9e-08 Score=86.82 Aligned_cols=89 Identities=28% Similarity=0.389 Sum_probs=66.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCCh-hhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~-~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
|+||||+|+|.+|+.+++.|.++|++++++++++..+. +.++ . ..+ +. +
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~------~------------~~~---------~~-~-- 52 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIA------G------------AYG---------CE-V-- 52 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHH------H------------HTT---------CE-E--
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHH------H------------HhC---------CC-c--
Confidence 68999999999999999999999999999999984221 1111 0 001 11 1
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|++++ +...++|+|+.|||+..+.+.+..++++| |++++
T Consensus 53 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~ 92 (331)
T 4hkt_A 53 RTIDAI-EAAADIDAVVICTPTDTHADLIERFARAG-KAIFC 92 (331)
T ss_dssp CCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCHHHH-hcCCCCCEEEEeCCchhHHHHHHHHHHcC-CcEEE
Confidence 234443 22247999999999999999999999999 56666
No 72
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=98.65 E-value=3.9e-07 Score=77.23 Aligned_cols=73 Identities=19% Similarity=0.279 Sum_probs=58.1
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
+||+|+|+ |++|+.+++.+.++|+++|+++.++..+..
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~----------------------------------------- 39 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLS----------------------------------------- 39 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTH-----------------------------------------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHH-----------------------------------------
Confidence 48999998 999999999999899999999987631110
Q ss_pred CCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
++ . ..++|+|+|+|++....+.+..++++|+. +|+
T Consensus 40 ---~~-~-~~~~DvvIDfT~p~a~~~~~~~a~~~g~~-~Vi 74 (245)
T 1p9l_A 40 ---LL-T-DGNTEVVIDFTHPDVVMGNLEFLIDNGIH-AVV 74 (245)
T ss_dssp ---HH-H-HTTCCEEEECSCTTTHHHHHHHHHHTTCE-EEE
T ss_pred ---HH-h-ccCCcEEEEccChHHHHHHHHHHHHcCCC-EEE
Confidence 00 0 12579999999999999999999999964 455
No 73
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=98.64 E-value=1.7e-08 Score=91.79 Aligned_cols=93 Identities=18% Similarity=0.210 Sum_probs=65.6
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHcCC--------CeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEE
Q 024629 1 MG-KVKIGINGFGRIGRLVARVILQRD--------DVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLL 70 (265)
Q Consensus 1 m~-~~~V~IiG~G~~G~~l~r~L~~~p--------~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~ 70 (265)
|+ ++||||||+|.+|+..++.+.+.| ++||++|+|+..+ .+..+ . +| + .
T Consensus 23 Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a------~---~~---------~--~- 81 (412)
T 4gqa_A 23 MSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHA------A---KL---------G--A- 81 (412)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHH------H---HH---------T--C-
T ss_pred ccccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHH------H---Hc---------C--C-
Confidence 54 699999999999999999887643 6899999998422 11111 0 01 1 0
Q ss_pred ECCEEEEEEecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 71 FGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 71 ~~g~~i~~~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.+++ .|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 82 -----~~~y--~d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~ 125 (412)
T 4gqa_A 82 -----EKAY--GDWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAG-KHVYC 125 (412)
T ss_dssp -----SEEE--SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred -----CeEE--CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcC-CCeEe
Confidence 0122 344554 33467999999999999999999999999 56766
No 74
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.64 E-value=4.1e-08 Score=87.55 Aligned_cols=90 Identities=19% Similarity=0.216 Sum_probs=66.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcC-CCeEEEEEeccCCCh-hhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQR-DDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~-p~~el~~i~~~~~~~-~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
|+||||+|+|.+|+.+++.|.++ |++++++++++..+. +..+ . ..+ +..+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~------~------------~~~---------~~~~- 64 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAV------E------------RTG---------ARGH- 64 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHH------H------------HHC---------CEEE-
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHH------H------------HcC---------Ccee-
Confidence 68999999999999999999998 899999999984221 1111 0 001 1222
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|++++ +...++|+|+.|||+..+.+.+..++++| |++++
T Consensus 65 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~ 104 (354)
T 3q2i_A 65 -ASLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAG-FHVMT 104 (354)
T ss_dssp -SCHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred -CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CCEEE
Confidence 344444 22247999999999999999999999999 56666
No 75
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.64 E-value=3.1e-08 Score=87.99 Aligned_cols=92 Identities=24% Similarity=0.339 Sum_probs=66.0
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCCh-hhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~-~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
||+||||||+|.+|+.+++.|.++|++++++++++..+. +.++ ..+ + + ...+
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~------~~~------------~--~------~~~~- 53 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMK------EKL------------G--V------EKAY- 53 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHH------HHH------------T--C------SEEE-
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHH------HHh------------C--C------Ccee-
Confidence 258999999999999999999999999999999984221 1111 000 1 0 0122
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|.+++ +...++|+|+.|||+..+.+.+..++++| |++++
T Consensus 54 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~ 93 (344)
T 3ezy_A 54 -KDPHEL-IEDPNVDAVLVCSSTNTHSELVIACAKAK-KHVFC 93 (344)
T ss_dssp -SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred -CCHHHH-hcCCCCCEEEEcCCCcchHHHHHHHHhcC-CeEEE
Confidence 244443 22247999999999999999999999999 55666
No 76
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=98.61 E-value=6.8e-08 Score=88.85 Aligned_cols=100 Identities=25% Similarity=0.290 Sum_probs=67.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
|+++||||||+|.+|+..++.|.++|+++|++|+++..+ .+..+..+ ..+ | + . ...++
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~------~~~---------g--~--~--~~~~~ 76 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEIL------KKN---------G--K--K--PAKVF 76 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHH------HHT---------T--C--C--CCEEE
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHH------Hhc---------C--C--C--CCcee
Confidence 557999999999999999999999999999999998422 11111000 000 0 0 0 01122
Q ss_pred e--cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 80 G--VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~--~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
. ..|.+++ +...++|+|+.|||+..+.+.+.+++++| |+|++
T Consensus 77 ~~~~~~~~~l-l~~~~vD~V~i~tp~~~h~~~~~~al~aG-khV~~ 120 (444)
T 2ixa_A 77 GNGNDDYKNM-LKDKNIDAVFVSSPWEWHHEHGVAAMKAG-KIVGM 120 (444)
T ss_dssp CSSTTTHHHH-TTCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEE
T ss_pred ccCCCCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CeEEE
Confidence 1 0144443 22347999999999999999999999999 56666
No 77
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=98.60 E-value=6.6e-08 Score=84.15 Aligned_cols=86 Identities=20% Similarity=0.242 Sum_probs=64.6
Q ss_pred CccEEEEEccChhHHHHHHHHHc---CCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 2 GKVKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~---~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
+++||||+|+|.+|+..++.+.. +++++++++.++.... . ..+ +..
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a----------~------------~~g---------~~~ 54 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELG----------S------------LDE---------VRQ 54 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCC----------E------------ETT---------EEB
T ss_pred CcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHH----------H------------HcC---------CCC
Confidence 37999999999999999999887 6889999999873110 0 001 111
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|++++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 55 ---~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~ 94 (294)
T 1lc0_A 55 ---ISLEDA-LRSQEIDVAYICSESSSHEDYIRQFLQAG-KHVLV 94 (294)
T ss_dssp ---CCHHHH-HHCSSEEEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred ---CCHHHH-hcCCCCCEEEEeCCcHhHHHHHHHHHHCC-CcEEE
Confidence 234443 22357999999999999999999999999 56666
No 78
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.60 E-value=5.3e-08 Score=86.45 Aligned_cols=93 Identities=23% Similarity=0.275 Sum_probs=66.5
Q ss_pred CccEEEEEccChhHHHHHHHHH-cCCCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 2 GKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~-~~p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
||+||||+|+|.+|+.+++.|. ++|++++++++++..+ .+.++ ..+ + + ....+
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~------~~~------------g--~-----~~~~~ 55 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVV------EQY------------Q--L-----NATVY 55 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHH------HHT------------T--C-----CCEEE
T ss_pred CeEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHH------HHh------------C--C-----CCeee
Confidence 2589999999999999999999 7899999999998422 11111 001 1 0 01122
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|++++ ....++|+|+.|||+..+.+.+..++++| |++++
T Consensus 56 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~ 95 (344)
T 3mz0_A 56 --PNDDSL-LADENVDAVLVTSWGPAHESSVLKAIKAQ-KYVFC 95 (344)
T ss_dssp --SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred --CCHHHH-hcCCCCCEEEECCCchhHHHHHHHHHHCC-CcEEE
Confidence 344444 22246999999999999999999999999 56666
No 79
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.59 E-value=7e-08 Score=86.26 Aligned_cols=95 Identities=14% Similarity=0.218 Sum_probs=66.3
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
+++||||+|+|.+|+.+++.|.++|++++++++++..+ .+.++ ..++... . ...+
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a------~~~~~~~--------~---------~~~~- 60 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFA------TANNYPE--------S---------TKIH- 60 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHH------HHTTCCT--------T---------CEEE-
T ss_pred CceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHH------HHhCCCC--------C---------Ceee-
Confidence 47999999999999999999999999999999997422 11111 1011000 0 1122
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 61 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~V~~ 100 (362)
T 1ydw_A 61 -GSYESL-LEDPEIDALYVPLPTSLHVEWAIKAAEKG-KHILL 100 (362)
T ss_dssp -SSHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHTTT-CEEEE
T ss_pred -CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHCC-CeEEE
Confidence 234443 22246899999999999999999999999 55666
No 80
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.58 E-value=7.5e-08 Score=85.14 Aligned_cols=92 Identities=21% Similarity=0.228 Sum_probs=65.3
Q ss_pred CccEEEEEccChhHHHHHHHHHcCC--CeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRD--DVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p--~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
||+||||+|+|.+|+.+++.|.+.| ++++++++++..+ .+.++ ..+ + + . ..
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a------~~~------------~--~--~----~~ 54 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFA------QKH------------D--I--P----KA 54 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHH------HHH------------T--C--S----CE
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHH------HHc------------C--C--C----cc
Confidence 2589999999999999999998877 4899999998422 11111 000 1 0 0 12
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+ .|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 55 ~--~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~ 95 (334)
T 3ohs_X 55 Y--GSYEEL-AKDPNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLC 95 (334)
T ss_dssp E--SSHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEE
T ss_pred c--CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEE
Confidence 2 234443 22347999999999999999999999999 56766
No 81
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.57 E-value=9.5e-08 Score=83.88 Aligned_cols=90 Identities=17% Similarity=0.209 Sum_probs=64.1
Q ss_pred CCccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~-l~r~L~~~p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
|+++||||+|+|.+|+. +++.|.++|+++++++.++..+ .+.++. ..+ +.+
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~------------------~~g---------~~~ 55 (319)
T 1tlt_A 3 LKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICE------------------SWR---------IPY 55 (319)
T ss_dssp --CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHH------------------HHT---------CCB
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHH------------------HcC---------CCc
Confidence 34689999999999997 9999998899999999997533 211110 001 011
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+ .+.+++ ..++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 56 ~--~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~ 94 (319)
T 1tlt_A 56 A--DSLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGV-HVCV 94 (319)
T ss_dssp C--SSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTC-EEEE
T ss_pred c--CcHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCC-eEEE
Confidence 1 233333 2579999999999999999999999994 5666
No 82
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=98.57 E-value=1.1e-07 Score=87.17 Aligned_cols=97 Identities=13% Similarity=0.087 Sum_probs=67.6
Q ss_pred CCccEEEEEccChhHH-HHHHHHHcCCCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~-~l~r~L~~~p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
|+++||||||+|.+|+ .+++.|.+++++++++++++..+ .+.++ ..++.- ...+.+
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a------~~~g~~----------------~~~~~~ 138 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVA------AEYGVD----------------PRKIYD 138 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHH------HHTTCC----------------GGGEEC
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHH------HHhCCC----------------cccccc
Confidence 5579999999999997 89999998899999999997422 11111 001100 000112
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+ .|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 139 ~--~~~~~l-l~~~~vD~V~iatp~~~h~~~~~~al~aG-k~Vl~ 179 (433)
T 1h6d_A 139 Y--SNFDKI-AKDPKIDAVYIILPNSLHAEFAIRAFKAG-KHVMC 179 (433)
T ss_dssp S--SSGGGG-GGCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred c--CCHHHH-hcCCCCCEEEEcCCchhHHHHHHHHHHCC-CcEEE
Confidence 1 345554 22347999999999999999999999999 55666
No 83
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=98.55 E-value=2.9e-07 Score=81.41 Aligned_cols=87 Identities=21% Similarity=0.231 Sum_probs=63.9
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCC--------CeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEEC
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRD--------DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG 72 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p--------~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~ 72 (265)
|+++||||+|+|.+|+.+++.|.+++ ++++++|+++... .. . .+. ..
T Consensus 1 Mk~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~--~~-------~---~~~-------~~------ 55 (332)
T 2ejw_A 1 MEALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPR--KP-------R---AIP-------QE------ 55 (332)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTT--SC-------C---SSC-------GG------
T ss_pred CCeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHH--Hh-------h---ccC-------cc------
Confidence 77799999999999999999999887 7999999987411 00 0 000 00
Q ss_pred CEEEEEEecCCCCCCCccccCccEEEEecCCc-ccHHHHHHHHhCCCcEEEE
Q 024629 73 EKPVTVFGVRNPEEIPWAETGAEYVVESTGVF-TDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 73 g~~i~~~~~~d~~~~~~~~~~~DvV~~atp~~-~~~~~~~~~~~~g~~~vvi 123 (265)
..+ .|++++ . ++|+|++|||+. .+.+++.+++++|+ +||+
T Consensus 56 ----~~~--~d~~~l---l-~iDvVve~t~~~~~a~~~~~~AL~aGK-hVVt 96 (332)
T 2ejw_A 56 ----LLR--AEPFDL---L-EADLVVEAMGGVEAPLRLVLPALEAGI-PLIT 96 (332)
T ss_dssp ----GEE--SSCCCC---T-TCSEEEECCCCSHHHHHHHHHHHHTTC-CEEE
T ss_pred ----ccc--CCHHHH---h-CCCEEEECCCCcHHHHHHHHHHHHcCC-eEEE
Confidence 022 466776 2 799999999987 45678889999995 4554
No 84
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.53 E-value=1.8e-07 Score=82.91 Aligned_cols=92 Identities=16% Similarity=0.230 Sum_probs=65.0
Q ss_pred CccEEEEEccChhHHHHHHHHH-cCCCeEEEEEeccCCCh-hhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 2 GKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~-~~p~~el~~i~~~~~~~-~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
+++||||+|+|.+|+.+++.|. ++++++++++.++..+. +..+ . ..+ . ..++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a------~------------~~g--~------~~~~ 60 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAK------N------------ELG--V------ETTY 60 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHH------H------------TTC--C------SEEE
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHH------H------------HhC--C------Cccc
Confidence 4689999999999999999998 78899999999874221 1111 0 001 0 0122
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|.+++ +...++|+|+.|||+..+.+.+..++++| |++++
T Consensus 61 --~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-~~v~~ 100 (346)
T 3cea_A 61 --TNYKDM-IDTENIDAIFIVAPTPFHPEMTIYAMNAG-LNVFC 100 (346)
T ss_dssp --SCHHHH-HTTSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred --CCHHHH-hcCCCCCEEEEeCChHhHHHHHHHHHHCC-CEEEE
Confidence 233333 11236999999999999999999999999 45666
No 85
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.52 E-value=2.2e-07 Score=81.75 Aligned_cols=90 Identities=21% Similarity=0.280 Sum_probs=65.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
|+||||+|+|.+|+.+++.|.++|+++++++.++..+ .+.++ ..+ + . ...+
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~------~~~------------~--~------~~~~-- 52 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFA------SRY------------Q--N------IQLF-- 52 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHG------GGS------------S--S------CEEE--
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHH------HHc------------C--C------CeEe--
Confidence 4799999999999999999999999999999987422 11111 000 1 0 0122
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|++++ . ..++|+|+.|||+..+.+.+..++++| |++++
T Consensus 53 ~~~~~~-l-~~~~D~V~i~tp~~~h~~~~~~al~~g-k~V~~ 91 (325)
T 2ho3_A 53 DQLEVF-F-KSSFDLVYIASPNSLHFAQAKAALSAG-KHVIL 91 (325)
T ss_dssp SCHHHH-H-TSSCSEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCHHHH-h-CCCCCEEEEeCChHHHHHHHHHHHHcC-CcEEE
Confidence 244444 1 257999999999999999999999999 45666
No 86
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.52 E-value=1.3e-07 Score=83.66 Aligned_cols=92 Identities=15% Similarity=0.186 Sum_probs=62.5
Q ss_pred CCccEEEEEccChhHH-HHHHHHHcCCCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~-~l~r~L~~~p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
|+++||||||+|.+|. .+++.|. +++++|++|+++..+ .+.++ ..++ + ...
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~-~~~~~lvav~d~~~~~~~~~a------~~~~-----------~---------~~~ 54 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLI-DAGAELAGVFESDSDNRAKFT------SLFP-----------S---------VPF 54 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHH-HTTCEEEEEECSCTTSCHHHH------HHST-----------T---------CCB
T ss_pred CCccEEEEECCChHHHHHhhhhhc-CCCcEEEEEeCCCHHHHHHHH------HhcC-----------C---------Ccc
Confidence 7789999999999996 6777775 578999999998532 22211 0010 0 011
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+ .|++++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 55 ~--~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~ 95 (336)
T 2p2s_A 55 A--ASAEQL-ITDASIDLIACAVIPCDRAELALRTLDAG-KDFFT 95 (336)
T ss_dssp C--SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred c--CCHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCC-CcEEE
Confidence 1 233333 22247999999999999999999999999 56666
No 87
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.51 E-value=1.1e-07 Score=83.36 Aligned_cols=89 Identities=20% Similarity=0.240 Sum_probs=65.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
++||||+|+|.+|+.+++.|.++|+++++++.++. .+... .+. . + +..+ .
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~--~~~~~----------~~~--------~-------~-~~~~--~ 59 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSN--PDNLA----------LVP--------P-------G-CVIE--S 59 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESC--HHHHT----------TCC--------T-------T-CEEE--S
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCC--HHHHH----------HHH--------h-------h-Cccc--C
Confidence 68999999999999999999999999999999874 22111 000 0 0 1222 3
Q ss_pred CCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
|.+++ +...++|+|+.|||+..+.+.+..++++| |++++
T Consensus 60 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~ 98 (315)
T 3c1a_A 60 DWRSV-VSAPEVEAVIIATPPATHAEITLAAIASG-KAVLV 98 (315)
T ss_dssp STHHH-HTCTTCCEEEEESCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CHHHH-hhCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEE
Confidence 44443 21247999999999999999999999999 45666
No 88
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=98.49 E-value=3.9e-07 Score=80.40 Aligned_cols=104 Identities=21% Similarity=0.252 Sum_probs=61.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC------CCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCE
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQR------DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~------p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~ 74 (265)
|+++||+|+|+|.+|+.+++.|.++ ++++|++|+++........ + | ...|. .. ....+ .+ ..
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~--i--d--l~~~~-~~-~~~~g-~~--~~- 69 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRN--L--D--ISSII-SN-KEKTG-RI--SD- 69 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSS--C--C--HHHHH-HH-HHHHS-CS--CS-
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccc--c--C--HHHHH-HH-hhhcC-CC--Cc-
Confidence 7889999999999999999999876 7899999998752210000 0 0 00000 00 00000 00 00
Q ss_pred EEEEEecCCCCCCCccccCccEEEEecCCccc----HHHHHHHHhCCCcEEEE
Q 024629 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLKGGAKKVII 123 (265)
Q Consensus 75 ~i~~~~~~d~~~~~~~~~~~DvV~~atp~~~~----~~~~~~~~~~g~~~vvi 123 (265)
. .+ |.+++ +...++|+|++|||+... .++...++++|+ +||.
T Consensus 70 -~-~~---d~~e~-l~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGk-hVVt 115 (325)
T 3ing_A 70 -R-AF---SGPED-LMGEAADLLVDCTPASRDGVREYSLYRMAFESGM-NVVT 115 (325)
T ss_dssp -S-BC---CSGGG-GTTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTC-EEEE
T ss_pred -c-cC---CHHHH-hcCCCCCEEEECCCCccccchHHHHHHHHHHCCC-eEEE
Confidence 0 00 22222 223578999999997543 478899999995 4444
No 89
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=98.49 E-value=1.1e-07 Score=85.90 Aligned_cols=90 Identities=20% Similarity=0.291 Sum_probs=66.5
Q ss_pred ccEEEEEccC-hhHHHHHHHHHcCCCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 3 KVKIGINGFG-RIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~~~V~IiG~G-~~G~~l~r~L~~~p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
++||||+|+| .+|..+++.|.++|++++++++++... .+..+ . .-+ ++.+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a------~------------~~g---------~~~~- 53 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFG------K------------EYG---------IPVF- 53 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHH------H------------HHT---------CCEE-
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHH------H------------HcC---------CCeE-
Confidence 5899999998 999999999999999999999997422 11111 0 001 1122
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 54 -~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-k~Vl~ 93 (387)
T 3moi_A 54 -ATLAEM-MQHVQMDAVYIASPHQFHCEHVVQASEQG-LHIIV 93 (387)
T ss_dssp -SSHHHH-HHHSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred -CCHHHH-HcCCCCCEEEEcCCcHHHHHHHHHHHHCC-Cceee
Confidence 344444 22346999999999999999999999999 56666
No 90
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=98.48 E-value=1.2e-07 Score=84.97 Aligned_cols=92 Identities=16% Similarity=0.224 Sum_probs=62.3
Q ss_pred CCccEEEEEccChhHH-HHHHHHHcCCCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~-~l~r~L~~~p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
|+++||||||+|.+|. .++..+. +|+++|++|+++... .+.++ ..++ . ...
T Consensus 24 m~~irvgiiG~G~~~~~~~~~~~~-~~~~~lvav~d~~~~~a~~~a------~~~~-----------~---------~~~ 76 (361)
T 3u3x_A 24 MDELRFAAVGLNHNHIYGQVNCLL-RAGARLAGFHEKDDALAAEFS------AVYA-----------D---------ARR 76 (361)
T ss_dssp --CCEEEEECCCSTTHHHHHHHHH-HTTCEEEEEECSCHHHHHHHH------HHSS-----------S---------CCE
T ss_pred ccCcEEEEECcCHHHHHHHHHHhh-cCCcEEEEEEcCCHHHHHHHH------HHcC-----------C---------Ccc
Confidence 4479999999999995 4566665 589999999998422 11111 1011 0 012
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+ .|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 77 ~--~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~ 117 (361)
T 3u3x_A 77 I--ATAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHG-KDVLV 117 (361)
T ss_dssp E--SCHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTT-CEEEE
T ss_pred c--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEE
Confidence 2 244444 22356999999999999999999999999 56666
No 91
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=98.48 E-value=2e-07 Score=82.74 Aligned_cols=91 Identities=21% Similarity=0.192 Sum_probs=66.4
Q ss_pred ccEEEEEccC-hhHHHHHHHHHcC-CCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 3 KVKIGINGFG-RIGRLVARVILQR-DDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 3 ~~~V~IiG~G-~~G~~l~r~L~~~-p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
++||||+|+| .+|+..++.|.+. |++++++|+++..+ .+.++ .. | + . ..++
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a------~~---~---------~--~------~~~~ 71 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFA------KM---V---------G--N------PAVF 71 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHH------HH---H---------S--S------CEEE
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHH------HH---h---------C--C------Cccc
Confidence 6999999999 8999999999998 89999999998422 11111 00 0 1 0 0122
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 72 --~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~ 111 (340)
T 1zh8_A 72 --DSYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKG-VHVIC 111 (340)
T ss_dssp --SCHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTT-CEEEE
T ss_pred --CCHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCC-CcEEE
Confidence 344444 22357999999999999999999999999 56666
No 92
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=98.48 E-value=2.3e-07 Score=85.08 Aligned_cols=91 Identities=16% Similarity=0.291 Sum_probs=63.9
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC---------CCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEE
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQR---------DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF 71 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~---------p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~ 71 (265)
|+++||||+|+|.+|+.+++.|.+| +++++++|+++... ...... . +
T Consensus 8 Mk~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~--~~~~~~---------~--------~----- 63 (444)
T 3mtj_A 8 MKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLD--KAEALA---------G--------G----- 63 (444)
T ss_dssp CSCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHH--HHHHHH---------T--------T-----
T ss_pred hCcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHH--Hhhhhc---------c--------c-----
Confidence 3468999999999999999988753 78999999997422 111000 0 1
Q ss_pred CCEEEEEEecCCCCCCCccccCccEEEEecCC-cccHHHHHHHHhCCCcEEEE
Q 024629 72 GEKPVTVFGVRNPEEIPWAETGAEYVVESTGV-FTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 72 ~g~~i~~~~~~d~~~~~~~~~~~DvV~~atp~-~~~~~~~~~~~~~g~~~vvi 123 (265)
...+ .|++++ +...++|+|++|||+ ..+.+++..++++|+ +|++
T Consensus 64 ----~~~~--~d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGK-hVvt 108 (444)
T 3mtj_A 64 ----LPLT--TNPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGK-HVVT 108 (444)
T ss_dssp ----CCEE--SCTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTC-EEEE
T ss_pred ----Cccc--CCHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCC-EEEE
Confidence 0121 244443 233578999999996 789999999999994 5555
No 93
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=98.47 E-value=2.3e-07 Score=84.86 Aligned_cols=110 Identities=14% Similarity=0.286 Sum_probs=67.5
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccC-cccccceeeeCC-ceEE---ECCEEE
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG-QWKHHELKVKDD-KTLL---FGEKPV 76 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~-~~~~~~v~~~~~-~~l~---~~g~~i 76 (265)
+++||||+|+|.+|+.+++.+.+.|+++|++|+++..+. ..... ...|| .|. +..... ..+. -.+ ..
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~er--a~~~a--~~~yG~~~~---~~~~~~~~~i~~a~~~g-~~ 93 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPN--TFKAI--RTAYGDEEN---AREATTESAMTRAIEAG-KI 93 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHH--HHHHH--HHHHSSSTT---EEECSSHHHHHHHHHTT-CE
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHH--HHHHH--HHhcCCccc---cccccchhhhhhhhccC-Cc
Confidence 469999999999999999999999999999999985321 11110 00011 010 000000 0000 000 02
Q ss_pred EEEecCCCCCCCccccCccEEEEecCC-cccHHHHHHHHhCCCcEEEE
Q 024629 77 TVFGVRNPEEIPWAETGAEYVVESTGV-FTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 77 ~~~~~~d~~~~~~~~~~~DvV~~atp~-~~~~~~~~~~~~~g~~~vvi 123 (265)
.++ .|.+++ +...++|+|++|||+ ..+.+++..++++| |+|++
T Consensus 94 ~v~--~D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AG-KHVv~ 137 (446)
T 3upl_A 94 AVT--DDNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNG-KHLVM 137 (446)
T ss_dssp EEE--SCHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTT-CEEEE
T ss_pred eEE--CCHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcC-CcEEe
Confidence 233 355554 333579999999987 45788999999999 55665
No 94
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=98.46 E-value=4.4e-07 Score=79.61 Aligned_cols=90 Identities=19% Similarity=0.283 Sum_probs=65.1
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
|+||||||+ |++|+..++.+.+. ++++++++|+..+....+ .. +. + ..++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~~~~------~~---~~--------~---------~~~~-- 53 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPATNVGLVD------SF---FP--------E---------AEFF-- 53 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCGGGG------GT---CT--------T---------CEEE--
T ss_pred ceEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCCHHHHHHH------hh---CC--------C---------Ccee--
Confidence 689999999 89999999999987 589999999853321111 10 10 1 1122
Q ss_pred CCCCCCCc--------cccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 82 RNPEEIPW--------AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~d~~~~~~--------~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|.+++ + ...++|+|+.|||+..+.+++..++++| |+|++
T Consensus 54 ~~~~~l-l~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~ 101 (312)
T 3o9z_A 54 TEPEAF-EAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLG-ANALS 101 (312)
T ss_dssp SCHHHH-HHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCHHHH-HHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCC-CeEEE
Confidence 233333 1 1367999999999999999999999999 56666
No 95
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=98.45 E-value=1.4e-07 Score=83.64 Aligned_cols=104 Identities=18% Similarity=0.222 Sum_probs=62.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCC-------CeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECC
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRD-------DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE 73 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p-------~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g 73 (265)
|+++||||+|+|.+|+.+++.|.+++ +++|++|+++....... .+ + ...|. .. ...+ .+ .
T Consensus 4 M~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~--~~--~--~~~~~-~~--~~~~-~~--~- 70 (331)
T 3c8m_A 4 MKTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNE--RI--D--IGKVI-SY--KEKG-SL--D- 70 (331)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECT--TC--C--HHHHH-HH--HHTT-CG--G-
T ss_pred CcEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhc--cc--C--hHHHh-hh--hccC-Cc--c-
Confidence 33699999999999999999998876 69999999975221000 00 0 00000 00 0000 00 0
Q ss_pred EEEEEEe-cCCCCCCCccccCccEEEEecCCc----ccHHHHHHHHhCCCcEEEE
Q 024629 74 KPVTVFG-VRNPEEIPWAETGAEYVVESTGVF----TDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 74 ~~i~~~~-~~d~~~~~~~~~~~DvV~~atp~~----~~~~~~~~~~~~g~~~vvi 123 (265)
.++. ..|++++ + ..++|+|++|||+. .+.+++..++++|+ +||+
T Consensus 71 ---~~~~~~~d~~~l-l-~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGk-hVvt 119 (331)
T 3c8m_A 71 ---SLEYESISASEA-L-ARDFDIVVDATPASADGKKELAFYKETFENGK-DVVT 119 (331)
T ss_dssp ---GCCSEECCHHHH-H-HSSCSEEEECSCCCSSSHHHHHHHHHHHHTTC-EEEE
T ss_pred ---cccCCCCCHHHH-h-CCCCCEEEECCCCCCccchHHHHHHHHHHCCC-eEEe
Confidence 0000 0133333 2 25789999999996 67788999999995 5554
No 96
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=98.41 E-value=6.6e-07 Score=78.68 Aligned_cols=91 Identities=22% Similarity=0.180 Sum_probs=65.0
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
|+||||||+ |++|...++.+.+. +.++++++|+..+....+ ..++ + .+++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~~~~------~~~~-----------~---------~~~~-- 53 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDINDSVGIID------SISP-----------Q---------SEFF-- 53 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCGGGG------GTCT-----------T---------CEEE--
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCCHHHHHHH------hhCC-----------C---------CcEE--
Confidence 689999999 89999999999987 699999999853321111 1110 1 1122
Q ss_pred CCCCCCC-----c---cccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 82 RNPEEIP-----W---AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~d~~~~~-----~---~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|.+++. | ...++|+|+.|||+..+.+++..++++| |+|++
T Consensus 54 ~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~ 102 (318)
T 3oa2_A 54 TEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLG-CDVIC 102 (318)
T ss_dssp SSHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCC-CeEEE
Confidence 2333320 0 1367999999999999999999999999 56766
No 97
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=98.38 E-value=2.1e-07 Score=84.34 Aligned_cols=95 Identities=19% Similarity=0.141 Sum_probs=64.9
Q ss_pred CCccEEEEEccCh---hHHHHHHHHHcCCCeEEEE-EeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEE
Q 024629 1 MGKVKIGINGFGR---IGRLVARVILQRDDVELVA-VNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP 75 (265)
Q Consensus 1 m~~~~V~IiG~G~---~G~~l~r~L~~~p~~el~~-i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~ 75 (265)
|+++||||||+|. +|+..++.+...++++|++ ++++..+ .+..+ ..++.-.
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a------~~~g~~~------------------ 65 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFG------EQLGVDS------------------ 65 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHH------HHTTCCG------------------
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHH------HHhCCCc------------------
Confidence 4579999999999 9999999999888999998 7777422 11111 0011000
Q ss_pred EEEEecCCCCCCCccc-----cCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 76 VTVFGVRNPEEIPWAE-----TGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 76 i~~~~~~d~~~~~~~~-----~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
..++ .|.+++ +.. .++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 66 ~~~~--~~~~~l-l~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~ 114 (398)
T 3dty_A 66 ERCY--ADYLSM-FEQEARRADGIQAVSIATPNGTHYSITKAALEAG-LHVVC 114 (398)
T ss_dssp GGBC--SSHHHH-HHHHTTCTTCCSEEEEESCGGGHHHHHHHHHHTT-CEEEE
T ss_pred ceee--CCHHHH-HhcccccCCCCCEEEECCCcHHHHHHHHHHHHCC-CeEEE
Confidence 0011 233332 111 35899999999999999999999999 56666
No 98
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=98.38 E-value=2.5e-07 Score=84.41 Aligned_cols=95 Identities=24% Similarity=0.220 Sum_probs=64.3
Q ss_pred CCccEEEEEccCh---hHHHHHHHHHcCCCeEEEE-EeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEE
Q 024629 1 MGKVKIGINGFGR---IGRLVARVILQRDDVELVA-VNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP 75 (265)
Q Consensus 1 m~~~~V~IiG~G~---~G~~l~r~L~~~p~~el~~-i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~ 75 (265)
|+++||||||+|. +|+..++.+...+++++++ ++++..+ .+..+ ..++.- .
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a------~~~g~~----------------~-- 90 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASG------RELGLD----------------P-- 90 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHH------HHHTCC----------------G--
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHH------HHcCCC----------------c--
Confidence 4568999999998 9999999999889999997 8887422 11111 001000 0
Q ss_pred EEEEecCCCCCCCccc-----cCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 76 VTVFGVRNPEEIPWAE-----TGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 76 i~~~~~~d~~~~~~~~-----~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
..++ .|++++ +.. .++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 91 ~~~~--~~~~~l-l~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~ 139 (417)
T 3v5n_A 91 SRVY--SDFKEM-AIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRG-IHVIC 139 (417)
T ss_dssp GGBC--SCHHHH-HHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTT-CEEEE
T ss_pred cccc--CCHHHH-HhcccccCCCCcEEEECCCcHHHHHHHHHHHhCC-CeEEE
Confidence 0011 233333 222 35899999999999999999999999 56666
No 99
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=98.37 E-value=5.2e-07 Score=79.66 Aligned_cols=100 Identities=21% Similarity=0.276 Sum_probs=61.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcC--------CCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCE
Q 024629 3 KVKIGINGFGRIGRLVARVILQR--------DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~--------p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~ 74 (265)
|+||||+|+|.+|+.+++.|.++ ++++|++|+++...... . + |. ..|. .. ....+
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~--~-i--d~--~~~~-~~-~~~~~-------- 64 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISG--D-F--SL--VEAL-RM-KRETG-------- 64 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEES--S-C--CH--HHHH-HH-HHHHS--------
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhcc--c-c--CH--HHHH-hh-hccCc--------
Confidence 58999999999999999999988 89999999997422100 0 0 00 0000 00 00000
Q ss_pred EEEEEecCCCCCCCccccCccEEEEecCCccc----HHHHHHHHhCCCcEEEE
Q 024629 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLKGGAKKVII 123 (265)
Q Consensus 75 ~i~~~~~~d~~~~~~~~~~~DvV~~atp~~~~----~~~~~~~~~~g~~~vvi 123 (265)
.++...|++++ +...++|+|++|||+..+ .++...++++|+ +|++
T Consensus 65 --~~~~~~d~~~l-l~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGk-hVv~ 113 (327)
T 3do5_A 65 --MLRDDAKAIEV-VRSADYDVLIEASVTRVDGGEGVNYIREALKRGK-HVVT 113 (327)
T ss_dssp --SCSBCCCHHHH-HHHSCCSEEEECCCCC----CHHHHHHHHHTTTC-EEEE
T ss_pred --cccCCCCHHHH-hcCCCCCEEEECCCCcccchhHHHHHHHHHHCCC-eEEe
Confidence 01000133333 223568999999998765 788999999995 4554
No 100
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=98.36 E-value=1.2e-07 Score=83.84 Aligned_cols=94 Identities=10% Similarity=0.065 Sum_probs=64.5
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCC--ChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI--TTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~--~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
||+||||+|+|.+|..+++.+ +|+++|++|+++.. ..+..+... ..| + + + .+.+
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~------~~~---------~--~--~---~~~~ 56 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAI------SEM---------N--I--K---PKKY 56 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHH------HTT---------T--C--C---CEEC
T ss_pred CceEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHH------HHc---------C--C--C---Cccc
Confidence 259999999987787888887 88999999999753 222221100 000 1 0 0 1222
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|.+++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 57 --~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~ 96 (337)
T 3ip3_A 57 --NNWWEM-LEKEKPDILVINTVFSLNGKILLEALERK-IHAFV 96 (337)
T ss_dssp --SSHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTT-CEEEE
T ss_pred --CCHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCC-CcEEE
Confidence 345554 33357999999999999999999999999 56666
No 101
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=98.32 E-value=3.1e-07 Score=85.32 Aligned_cols=96 Identities=16% Similarity=0.193 Sum_probs=67.9
Q ss_pred CCccEEEEEcc----ChhHHHHHHHHHcC-CCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCE
Q 024629 1 MGKVKIGINGF----GRIGRLVARVILQR-DDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (265)
Q Consensus 1 m~~~~V~IiG~----G~~G~~l~r~L~~~-p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~ 74 (265)
|+++||||||+ |.+|+..++.|.+. |+++|++|+++... .+.++ ..+ | + .+
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a------~~~------------g--~--~~- 93 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTI------EQL------------Q--L--KH- 93 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHH------HHT------------T--C--TT-
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHH------HHc------------C--C--Cc-
Confidence 34689999999 99999999999998 89999999997422 11111 001 1 0 00
Q ss_pred EEEEEecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCC-----cEEEE
Q 024629 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVII 123 (265)
Q Consensus 75 ~i~~~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~-----~~vvi 123 (265)
...+ .|++++ +...++|+|+.|||+..+.+.+..++++|. |+|++
T Consensus 94 -~~~~--~d~~el-l~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~ 143 (479)
T 2nvw_A 94 -ATGF--DSLESF-AQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYV 143 (479)
T ss_dssp -CEEE--SCHHHH-HHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEE
T ss_pred -ceee--CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEE
Confidence 1122 244444 223579999999999999999999999993 56776
No 102
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=98.32 E-value=1.9e-07 Score=85.71 Aligned_cols=95 Identities=18% Similarity=0.216 Sum_probs=67.2
Q ss_pred CccEEEEEcc----ChhHHHHHHHHHcC-CCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEE
Q 024629 2 GKVKIGINGF----GRIGRLVARVILQR-DDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP 75 (265)
Q Consensus 2 ~~~~V~IiG~----G~~G~~l~r~L~~~-p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~ 75 (265)
+++||||||+ |.+|+.+++.|.++ |+++|++|+++..+ .+.++ ..+ + + . .
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a------~~~------------g--~--~--~ 74 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATI------QRL------------K--L--S--N 74 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHH------HHT------------T--C--T--T
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHH------HHc------------C--C--C--c
Confidence 3589999999 99999999999999 99999999997422 11111 001 1 0 0 0
Q ss_pred EEEEecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCC-----cEEEE
Q 024629 76 VTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVII 123 (265)
Q Consensus 76 i~~~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~-----~~vvi 123 (265)
+..+ .|.+++ +...++|+|+.|||+..+.+.+..++++|. |+|++
T Consensus 75 ~~~~--~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~ 124 (438)
T 3btv_A 75 ATAF--PTLESF-ASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFV 124 (438)
T ss_dssp CEEE--SSHHHH-HHCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEE
T ss_pred ceee--CCHHHH-hcCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEe
Confidence 1122 244444 222479999999999999999999999993 45666
No 103
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=98.31 E-value=1.3e-06 Score=78.56 Aligned_cols=87 Identities=18% Similarity=0.211 Sum_probs=62.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCC-CeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRD-DVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p-~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
++||||+|+| .|+..++.+.+.| ++||++|+++..+ .+.++ . .-| ++.+
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a------~------------~~g---------v~~~- 57 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELA------H------------AFG---------IPLY- 57 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHH------H------------HTT---------CCEE-
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHH------H------------HhC---------CCEE-
Confidence 6999999999 5999999988876 5999999998532 22221 0 112 1233
Q ss_pred cCCCCCCCccccCccEEEEecCCccc----HHHHHHHHhCCCcEEEE
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~----~~~~~~~~~~g~~~vvi 123 (265)
.|.+++ ..++|+|+.|||+..+ .+.+.+++++| |+|++
T Consensus 58 -~~~~~l---~~~~D~v~i~~p~~~h~~~~~~~a~~al~aG-khVl~ 99 (372)
T 4gmf_A 58 -TSPEQI---TGMPDIACIVVRSTVAGGAGTQLARHFLARG-VHVIQ 99 (372)
T ss_dssp -SSGGGC---CSCCSEEEECCC--CTTSHHHHHHHHHHHTT-CEEEE
T ss_pred -CCHHHH---hcCCCEEEEECCCcccchhHHHHHHHHHHcC-CcEEE
Confidence 356666 2579999999999887 78899999999 56666
No 104
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.28 E-value=1.8e-06 Score=75.75 Aligned_cols=90 Identities=19% Similarity=0.209 Sum_probs=61.6
Q ss_pred CccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 2 GKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~-l~r~L~~~p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
||+||||+|+|.+|+. +++.|.++|+++++ ++++..+ .+.++ ..+ + . ...
T Consensus 1 m~~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~~~~~~~~~a------~~~------------g--~-------~~~ 52 (323)
T 1xea_A 1 MSLKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTRNPKVLGTLA------TRY------------R--V-------SAT 52 (323)
T ss_dssp -CEEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECSCHHHHHHHH------HHT------------T--C-------CCC
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeCCHHHHHHHH------HHc------------C--C-------Ccc
Confidence 2589999999999985 99999988999999 9887422 11111 000 1 0 000
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
. .+..+. + ..++|+|+.|+|+..+.+.+..++++|+ ++++
T Consensus 53 ~-~~~~~~-l-~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~V~~ 92 (323)
T 1xea_A 53 C-TDYRDV-L-QYGVDAVMIHAATDVHSTLAAFFLHLGI-PTFV 92 (323)
T ss_dssp C-SSTTGG-G-GGCCSEEEECSCGGGHHHHHHHHHHTTC-CEEE
T ss_pred c-cCHHHH-h-hcCCCEEEEECCchhHHHHHHHHHHCCC-eEEE
Confidence 0 122222 1 2579999999999999999999999995 4555
No 105
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.21 E-value=1.5e-06 Score=73.09 Aligned_cols=79 Identities=27% Similarity=0.423 Sum_probs=59.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecCC
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~d 83 (265)
+||||+|+|.+|+.+++.|. +++++++++.++....+ . .+ .|
T Consensus 1 m~vgiIG~G~mG~~~~~~l~-~~g~~lv~v~d~~~~~~--------------------------~---------~~--~~ 42 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLE-RNGFEIAAILDVRGEHE--------------------------K---------MV--RG 42 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEEECSSCCCT--------------------------T---------EE--SS
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCCEEEEEEecCcchh--------------------------h---------hc--CC
Confidence 48999999999999999988 57899999988742110 0 11 23
Q ss_pred CCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 84 ~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
++++- ..++|+||+|+|+..+.+.+..++++|+ ++++
T Consensus 43 ~~~l~--~~~~DvVv~~~~~~~~~~~~~~~l~~G~-~vv~ 79 (236)
T 2dc1_A 43 IDEFL--QREMDVAVEAASQQAVKDYAEKILKAGI-DLIV 79 (236)
T ss_dssp HHHHT--TSCCSEEEECSCHHHHHHHHHHHHHTTC-EEEE
T ss_pred HHHHh--cCCCCEEEECCCHHHHHHHHHHHHHCCC-cEEE
Confidence 33331 1468999999999999999999999996 4444
No 106
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=98.18 E-value=1.1e-06 Score=79.04 Aligned_cols=93 Identities=13% Similarity=0.169 Sum_probs=63.4
Q ss_pred CCccEEEEEc-cChhHHH-HH----HHHHcCCCeEEE---------EEeccCCC-hhhhhhheeeecccCcccccceeee
Q 024629 1 MGKVKIGING-FGRIGRL-VA----RVILQRDDVELV---------AVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVK 64 (265)
Q Consensus 1 m~~~~V~IiG-~G~~G~~-l~----r~L~~~p~~el~---------~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~ 64 (265)
|+++||||+| +|.+|.. .+ +.+.+.+.++++ +++++..+ .+.++ ..+
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a------~~~----------- 66 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALA------KRF----------- 66 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHH------HHT-----------
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHH------HHh-----------
Confidence 4578999999 6999998 77 888877777654 68877422 11111 000
Q ss_pred CCceEEECCEEEEEEecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 65 DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 65 ~~~~l~~~g~~i~~~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+ + ..++ .|++++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 67 -~--~------~~~~--~~~~~l-l~~~~iD~V~i~tp~~~h~~~~~~al~~G-k~V~~ 112 (383)
T 3oqb_A 67 -N--I------ARWT--TDLDAA-LADKNDTMFFDAATTQARPGLLTQAINAG-KHVYC 112 (383)
T ss_dssp -T--C------CCEE--SCHHHH-HHCSSCCEEEECSCSSSSHHHHHHHHTTT-CEEEE
T ss_pred -C--C------Cccc--CCHHHH-hcCCCCCEEEECCCchHHHHHHHHHHHCC-CeEEE
Confidence 1 0 0122 344444 22356999999999999999999999999 56666
No 107
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.16 E-value=3.7e-06 Score=61.91 Aligned_cols=98 Identities=14% Similarity=0.208 Sum_probs=59.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
++||.|+|+|.+|+.+++.|.+++..+++.+. +. ......+. ..+ + ........
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~-r~--~~~~~~~~----------------~~~--~-----~~~~~d~~ 58 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVAD-HD--LAALAVLN----------------RMG--V-----ATKQVDAK 58 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEE-SC--HHHHHHHH----------------TTT--C-----EEEECCTT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEe-CC--HHHHHHHH----------------hCC--C-----cEEEecCC
Confidence 57999999999999999999988657766554 42 22111110 001 0 00010101
Q ss_pred CCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCC
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~ 126 (265)
+.+++.-...++|+||.|+|..........+.+.|.+.+++|.+
T Consensus 59 ~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 102 (118)
T 3ic5_A 59 DEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLTED 102 (118)
T ss_dssp CHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCCSC
T ss_pred CHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEecCc
Confidence 11111001247899999999988888888999999865555543
No 108
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.12 E-value=3.5e-06 Score=74.05 Aligned_cols=89 Identities=19% Similarity=0.225 Sum_probs=61.3
Q ss_pred cEEEEEccChhHHHH-HHHHHcCCCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 4 VKIGINGFGRIGRLV-ARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l-~r~L~~~p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
+||||+|+|.+|+.+ ++.|.+ +++++++++++..+ .+.++ ..+ + . . ..+
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~~~~~------~~~------------g--~--~----~~~-- 51 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERGAAYA------TEN------------G--I--G----KSV-- 51 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHHHHHH------HHT------------T--C--S----CCB--
T ss_pred CeEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHHHHHH------HHc------------C--C--C----ccc--
Confidence 589999999999998 888888 88999999987422 11111 000 1 0 0 011
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.|.+++ +...++|+|+.|||+..+.+.+..++++| |++++
T Consensus 52 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~ 91 (332)
T 2glx_A 52 TSVEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAG-KHVLC 91 (332)
T ss_dssp SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCHHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCC-CeEEE
Confidence 233332 11236899999999999999999999999 45666
No 109
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=98.03 E-value=4.3e-06 Score=74.73 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=31.9
Q ss_pred CccEEEEEccChhHHHHHHHHHcCC---CeEEEEEecc
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRD---DVELVAVNDP 36 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p---~~el~~i~~~ 36 (265)
+++||||+|+|.+|+.+++.|.+++ ++++++|+++
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 4689999999999999999999886 6999999985
No 110
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=98.02 E-value=7.4e-06 Score=67.78 Aligned_cols=90 Identities=17% Similarity=0.097 Sum_probs=62.6
Q ss_pred ccEEEEEccChhHHHHHHHH-HcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVI-LQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L-~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
..||+|+|+|.+|+.+++.+ .+. +++++++.|.. .+.. + -.+.| +++...
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~d--p~k~----------------------g--~~i~g--v~V~~~ 130 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVD--PEKV----------------------G--RPVRG--GVIEHV 130 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESC--TTTT----------------------T--CEETT--EEEEEG
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCC--HHHH----------------------h--hhhcC--CeeecH
Confidence 47999999999999999963 334 89999999863 2110 1 01122 223222
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.+.+++ ... ++|+|+.|+|+....+.+..+.++|++.++.
T Consensus 131 ~dl~el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Iln 170 (211)
T 2dt5_A 131 DLLPQR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILN 170 (211)
T ss_dssp GGHHHH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HhHHHH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEE
Confidence 344443 223 7999999999999889999999999875554
No 111
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=98.00 E-value=1.1e-05 Score=68.36 Aligned_cols=80 Identities=23% Similarity=0.297 Sum_probs=59.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
.+||+|+|+|.+|+.+++. + ++||+++.+ . .. +. + | +... .
T Consensus 12 ~~rV~i~G~GaIG~~v~~~---~-~leLv~v~~-~-k~------------------ge--------l---g--v~a~--~ 52 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL---G-NFEKIYAYD-R-IS------------------KD--------I---P--GVVR--L 52 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH---S-CCSEEEEEC-S-SC------------------CC--------C---S--SSEE--C
T ss_pred cceEEEECcCHHHHHHHhc---C-CcEEEEEEe-c-cc------------------cc--------c---C--ceee--C
Confidence 3799999999999999998 5 899999987 1 11 11 1 1 1122 4
Q ss_pred CCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEc
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS 124 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS 124 (265)
|.+++- .++|+|++|.++....++.++++++|+..++.|
T Consensus 53 d~d~ll---a~pD~VVe~A~~~av~e~~~~iL~aG~dvv~~S 91 (253)
T 1j5p_A 53 DEFQVP---SDVSTVVECASPEAVKEYSLQILKNPVNYIIIS 91 (253)
T ss_dssp SSCCCC---TTCCEEEECSCHHHHHHHHHHHTTSSSEEEECC
T ss_pred CHHHHh---hCCCEEEECCCHHHHHHHHHHHHHCCCCEEEcC
Confidence 677762 379999999999988888999999997433334
No 112
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.98 E-value=8.8e-06 Score=73.87 Aligned_cols=145 Identities=12% Similarity=0.118 Sum_probs=83.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCe-EEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe-
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG- 80 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~-el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~- 80 (265)
+||+|+|+|++|+.+++.|.+++++ +.+.+.++..+ .+.++..+ +.. .+..+ ....
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l------~~~--------~~~~~-------~~~~~ 60 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSI------KAK--------GYGEI-------DITTV 60 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHH------HHT--------TCCCC-------EEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHh------hhh--------cCCce-------EEEEe
Confidence 5999999999999999999999875 44555565322 22221100 000 00001 1111
Q ss_pred -cCCCCCCCcccc--CccEEEEecCCcccHHHHHHHHhCCCcEEEEcCC-CCCCceEEeeeC---ccccc-CCCCeEEcC
Q 024629 81 -VRNPEEIPWAET--GAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP-SKDAPMFVVGVN---ENEYK-PELNIVSNA 152 (265)
Q Consensus 81 -~~d~~~~~~~~~--~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~-~~~~~~~v~gvn---~~~i~-~~~~~V~~p 152 (265)
..|.+++.-... ++|+||.|+|.......+..++++|+..++++.. .++...+.|... .+..+ .+..++.++
T Consensus 61 D~~d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~ 140 (405)
T 4ina_A 61 DADSIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGS 140 (405)
T ss_dssp CTTCHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECC
T ss_pred cCCCHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcC
Confidence 011111100012 3899999999988888889999999754434333 222111222210 11111 145789999
Q ss_pred CccchhhhhHHHHHHHh
Q 024629 153 SCTTNCLAPLAKVIHDK 169 (265)
Q Consensus 153 ~C~~ta~~l~L~pL~~~ 169 (265)
||.+....+.+.++.++
T Consensus 141 G~~PG~~~l~a~~~~~~ 157 (405)
T 4ina_A 141 GFDPGVTNVFCAYAQKH 157 (405)
T ss_dssp BTTTBHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHh
Confidence 99999988888888875
No 113
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=97.93 E-value=5.9e-05 Score=62.64 Aligned_cols=69 Identities=25% Similarity=0.334 Sum_probs=53.4
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
+|-+|+|+ |++|+.+.++. ..++++|++..++. + .
T Consensus 13 ~~~~v~Ga~GrMG~~i~~~~-~~~~~elv~~id~~---------------------~---------------~------- 48 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQEIQKVF-SEKGHELVLKVDVN---------------------G---------------V------- 48 (228)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEETT---------------------E---------------E-------
T ss_pred ceeEEEEecCHHHHHHHHHH-hCCCCEEEEEEcCC---------------------C---------------c-------
Confidence 68999999 99999998865 56789998876642 0 0
Q ss_pred CCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+++ .++|+|+|-|-+....+.++.+++.|++ +|+
T Consensus 49 --~~l----~~~DVvIDFT~P~a~~~~~~~~~~~g~~-~Vi 82 (228)
T 1vm6_A 49 --EEL----DSPDVVIDFSSPEALPKTVDLCKKYRAG-LVL 82 (228)
T ss_dssp --EEC----SCCSEEEECSCGGGHHHHHHHHHHHTCE-EEE
T ss_pred --ccc----cCCCEEEECCCHHHHHHHHHHHHHcCCC-EEE
Confidence 011 2479999988889999999999999975 444
No 114
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.89 E-value=1.7e-05 Score=65.71 Aligned_cols=91 Identities=11% Similarity=0.156 Sum_probs=57.8
Q ss_pred ccEEEEEccChhHHHHHHH-HHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARV-ILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~-L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
..||+|+|+|.+|+.+++. ...+++++++++.|.. ++.. | -.+.| +++...
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~d--p~k~----------------------g--~~i~g--v~V~~~ 136 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDIN--ESKI----------------------G--TEVGG--VPVYNL 136 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESC--TTTT----------------------T--CEETT--EEEEEG
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCC--HHHH----------------------H--hHhcC--Ceeech
Confidence 4689999999999999994 3456689999999863 2211 1 01123 223322
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEc
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS 124 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS 124 (265)
.+.+++ . ... |+|+.|+|+....+.+..+.++|++.++.-
T Consensus 137 ~dl~el-i-~~~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf 176 (215)
T 2vt3_A 137 DDLEQH-V-KDE-SVAILTVPAVAAQSITDRLVALGIKGILNF 176 (215)
T ss_dssp GGHHHH-C-SSC-CEEEECSCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhHHHH-H-HhC-CEEEEecCchhHHHHHHHHHHcCCCEEEEc
Confidence 344433 1 123 999999999988899999999998755553
No 115
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.82 E-value=2.4e-05 Score=69.90 Aligned_cols=137 Identities=19% Similarity=0.186 Sum_probs=74.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
++||.|+|+|++|+.+++.|.++.++.++.++.. ..+... .. . ..+.+ ...
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~~--~~~~~~---------~~----------~-------~~~~~-d~~ 66 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNNE--NLEKVK---------EF----------A-------TPLKV-DAS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHH--HHHHHT---------TT----------S-------EEEEC-CTT
T ss_pred ccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCHH--HHHHHh---------cc----------C-------CcEEE-ecC
Confidence 5799999999999999999988765544333221 111110 00 0 01111 112
Q ss_pred CCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCCCceEEeeeCcccccCCCCeEEcCCcc--chhhh
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCT--TNCLA 160 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~~~~~v~gvn~~~i~~~~~~V~~p~C~--~ta~~ 160 (265)
|.+.+.-...++|+|+.|+|.+.....++.++++|+..+.+|...++ +..++ +..+ ++.+...++|. +--.-
T Consensus 67 d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~~yvD~s~~~~~----~~~l~-~~a~-~~g~~~i~~~G~~PG~~~ 140 (365)
T 3abi_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVDMVDVSFMPEN----PLELR-DEAE-KAQVTIVFDAGFAPGLSN 140 (365)
T ss_dssp CHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCEEEECCCCSSC----GGGGH-HHHH-HTTCEEECCCBTTTBHHH
T ss_pred CHHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCcceEeeeccchh----hhhhh-hhhc-cCCceeeecCCCCCchHH
Confidence 22221111257899999999999999999999999743334433221 11121 2222 24455556664 33233
Q ss_pred hHHHHHHHhcCeeE
Q 024629 161 PLAKVIHDKFGIVE 174 (265)
Q Consensus 161 l~L~pL~~~~~i~~ 174 (265)
+.+.-+.+++.+.+
T Consensus 141 ~~a~~~~~~~~~~~ 154 (365)
T 3abi_A 141 ILMGRIFQELDLKE 154 (365)
T ss_dssp HHHHHHHHHSCEEE
T ss_pred HHHHHHHHhccccc
Confidence 33344555655443
No 116
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.74 E-value=7.4e-05 Score=64.65 Aligned_cols=87 Identities=24% Similarity=0.225 Sum_probs=62.5
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
.+||+|+|+ |++|+.+++.+.++ ++++++..++....+ + +.| ++++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-g~~~V~~V~p~~~g~--------------------------~--~~G--~~vy-- 53 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGT--------------------------T--HLG--LPVF-- 53 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTC--------------------------E--ETT--EEEE--
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCcccc--------------------------e--eCC--eecc--
Confidence 589999999 99999999999887 488877666531110 0 011 2343
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.+.++++ ...++|+++.|+|+..+.+.+.+++++|++.+|+
T Consensus 54 ~sl~el~-~~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi 94 (288)
T 2nu8_A 54 NTVREAV-AATGATASVIYVPAPFCKDSILEAIDAGIKLIIT 94 (288)
T ss_dssp SSHHHHH-HHHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHh-hcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 2444442 0126999999999999999999999999886555
No 117
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.68 E-value=2.4e-05 Score=64.57 Aligned_cols=93 Identities=17% Similarity=0.317 Sum_probs=62.9
Q ss_pred ccEEEEEccChhHHHHHHHHH-cCCCeEEEEEeccCCChh-hhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTD-YMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~-~~p~~el~~i~~~~~~~~-~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
+.||+|+|+|..|+.+++.+. .+.+++++++.|.. ++ .. |. + .+ .| +++..
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~d--p~~ki----------G~--------~---~i--~G--vpV~~ 136 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLD--SNDLV----------GK--------T---TE--DG--IPVYG 136 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECT--TSTTT----------TC--------B---CT--TC--CBEEE
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCC--chhcc----------Cc--------e---eE--CC--eEEeC
Confidence 579999999999999998743 34679999999863 21 11 10 0 00 12 22333
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.++.+++ ....++|+++.|+|.....+.+..+.++|++.++-
T Consensus 137 ~~dL~~~-v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~n 178 (212)
T 3keo_A 137 ISTINDH-LIDSDIETAILTVPSTEAQEVADILVKAGIKGILS 178 (212)
T ss_dssp GGGHHHH-C-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHH-HHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEE
Confidence 2333332 12347999999999998889999999999986664
No 118
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.49 E-value=0.00041 Score=53.29 Aligned_cols=82 Identities=22% Similarity=0.366 Sum_probs=59.3
Q ss_pred ccEEEEEcc----ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~~~V~IiG~----G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
..+|+|+|+ |.+|..+++.|.+.. +++..++ +. .+ ++ .| .++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G-~~V~~vn-p~--~~--------------------------~i--~G--~~~ 59 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKG-FEVLPVN-PN--YD--------------------------EI--EG--LKC 59 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEEC-TT--CS--------------------------EE--TT--EEC
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCC-CEEEEeC-CC--CC--------------------------eE--CC--eee
Confidence 579999999 999999999998874 6754443 21 10 01 12 223
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+ .++++++ ..+|+|+.|+|.....+.+..+.++|++.+++
T Consensus 60 ~--~s~~el~---~~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~ 99 (138)
T 1y81_A 60 Y--RSVRELP---KDVDVIVFVVPPKVGLQVAKEAVEAGFKKLWF 99 (138)
T ss_dssp B--SSGGGSC---TTCCEEEECSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred c--CCHHHhC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEE
Confidence 2 3556663 56999999999988888888888999887776
No 119
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=97.47 E-value=0.00023 Score=61.18 Aligned_cols=84 Identities=14% Similarity=0.090 Sum_probs=51.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCC-CeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p-~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
|+++||+|+|+|.+|..+++.|.++. ..++.. .++. .+....+. +.| . . ....
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~-~d~~--~~~~~~~~----------------~~g--~--~---~~~~ 57 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVG-YNRS--DRSRDIAL----------------ERG--I--V---DEAT 57 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEE-ECSS--HHHHHHHH----------------HTT--S--C---SEEE
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEE-EcCC--HHHHHHHH----------------HcC--C--c---cccc
Confidence 66689999999999999999988653 466544 4442 21111000 011 0 0 0121
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHHh
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLK 115 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~ 115 (265)
.++++. ..++|+||.|+|.....+.+..+..
T Consensus 58 --~~~~~~---~~~aDvVilavp~~~~~~v~~~l~~ 88 (290)
T 3b1f_A 58 --ADFKVF---AALADVIILAVPIKKTIDFIKILAD 88 (290)
T ss_dssp --SCTTTT---GGGCSEEEECSCHHHHHHHHHHHHT
T ss_pred --CCHHHh---hcCCCEEEEcCCHHHHHHHHHHHHh
Confidence 344443 2579999999998877777666543
No 120
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=97.46 E-value=3.8e-05 Score=63.66 Aligned_cols=36 Identities=19% Similarity=0.215 Sum_probs=30.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
|+|+||+|+|+|.+|..+++.|.+.. .++..+.++.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g-~~V~~v~~r~ 56 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQ-IPAIIANSRG 56 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTT-CCEEEECTTC
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEECCC
Confidence 55789999999999999999998874 6777767764
No 121
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=97.40 E-value=0.00016 Score=64.92 Aligned_cols=113 Identities=16% Similarity=0.171 Sum_probs=61.3
Q ss_pred CC-ccEEEEEcc-ChhHHHHHHHHHcCCC-eEEEEEeccCCChhhhhhheeeecccCcccccceeeeCC---ceEE--EC
Q 024629 1 MG-KVKIGINGF-GRIGRLVARVILQRDD-VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDD---KTLL--FG 72 (265)
Q Consensus 1 m~-~~~V~IiG~-G~~G~~l~r~L~~~p~-~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~---~~l~--~~ 72 (265)
|+ |+||+|+|+ |.+|+..++.+.+||+ +++++++... +.+.+....+ ...+.+ +...+. ..+. +.
T Consensus 1 m~~m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~-ni~~l~~~~~--~f~~~~----v~v~d~~~~~~l~~~l~ 73 (388)
T 1r0k_A 1 MSQPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAK--RTNAKR----AVIADPSLYNDLKEALA 73 (388)
T ss_dssp -CCCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHH--HTTCSE----EEESCGGGHHHHHHHTT
T ss_pred CCCceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCC-CHHHHHHHHH--HcCCcE----EEEcChHHHHHHHHHhc
Confidence 54 489999999 9999999999999997 9999994432 3322111110 000000 000000 0000 00
Q ss_pred CEEEEEEe-cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 73 EKPVTVFG-VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 73 g~~i~~~~-~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+....++. .++..++ .... +|+|++|++.....+...+++++| |++++
T Consensus 74 ~~~~~v~~g~~~~~el-~~~~-iDvVV~ai~G~aGl~ptlaAi~aG-K~Vvl 122 (388)
T 1r0k_A 74 GSSVEAAAGADALVEA-AMMG-ADWTMAAIIGCAGLKATLAAIRKG-KTVAL 122 (388)
T ss_dssp TCSSEEEESHHHHHHH-HTSC-CSEEEECCCSGGGHHHHHHHHHTT-SEEEE
T ss_pred cCCcEEEeCccHHHHH-HcCC-CCEEEEeCCCHHHHHHHHHHHHCC-CEEEE
Confidence 00011221 1111112 1124 899999997777778888889999 55555
No 122
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.37 E-value=0.00035 Score=60.38 Aligned_cols=87 Identities=16% Similarity=0.187 Sum_probs=61.9
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
..||+|+|+ |.+|+.+++.+.++ ++++++...+....+ + +.| ++++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~-g~~~v~~VnP~~~g~--------------------------~--i~G--~~vy-- 53 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTY-GTKIVAGVTPGKGGM--------------------------E--VLG--VPVY-- 53 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTC--------------------------E--ETT--EEEE--
T ss_pred CCEEEEECCCCCHHHHHHHHHHHc-CCeEEEEECCCCCCc--------------------------e--ECC--EEee--
Confidence 579999999 99999999998887 588776555531110 0 012 3344
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.+.++++- ..++|++++++|+....+.++.+.++|++.+|+
T Consensus 54 ~sl~el~~-~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 54 DTVKEAVA-HHEVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp SSHHHHHH-HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 23444420 126899999999999999999999999985665
No 123
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=97.32 E-value=0.00038 Score=61.70 Aligned_cols=111 Identities=14% Similarity=0.141 Sum_probs=62.7
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCc--eEEECCEEEE
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDK--TLLFGEKPVT 77 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~--~l~~~g~~i~ 77 (265)
|.+.||+|+|+ |.||...++.+.+|+.+++++++... +.+.+..+.+ ...+++- .+..+... .| +. .
T Consensus 1 M~~k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~-n~~~l~~q~~--~f~p~~v--~v~~~~~~~~~l----~~-~ 70 (376)
T 3a06_A 1 MEERTLVILGATGSIGTQTLDVLKKVKGIRLIGISFHS-NLELAFKIVK--EFNVKNV--AITGDVEFEDSS----IN-V 70 (376)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESS-CHHHHHHHHH--HHTCCEE--EECSSCCCCCSS----SE-E
T ss_pred CCcceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccC-CHHHHHHHHH--HcCCCEE--EEccHHHHHHHH----HH-H
Confidence 65689999998 99999999999999889999996543 4443322210 0011110 00000000 00 00 0
Q ss_pred EEecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 78 ~~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
........++ ....++|+|+.|++.....+-.-.++++|. ++.+
T Consensus 71 ~~G~~~l~el-~~~~~~D~Vv~AivG~aGL~ptlaAi~aGK-~vaL 114 (376)
T 3a06_A 71 WKGSHSIEEM-LEALKPDITMVAVSGFSGLRAVLASLEHSK-RVCL 114 (376)
T ss_dssp EESTTHHHHH-HHHHCCSEEEECCCSTTHHHHHHHHHHHCS-EEEE
T ss_pred ccCHHHHHHH-hcCCCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEE
Confidence 0000000111 011468999999999988888888899994 4555
No 124
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=97.28 E-value=0.00078 Score=51.26 Aligned_cols=93 Identities=18% Similarity=0.160 Sum_probs=59.9
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
.+.++.|+|+|..|+.+++.|.++++++++++.+.. ... . ++ .+.| ++++..
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~--~~~----------~------------g~--~i~g--~pV~g~ 54 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDD--RKK----------H------------KT--TMQG--ITIYRP 54 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSC--GGG----------T------------TC--EETT--EEEECG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECC--ccc----------C------------CC--EecC--eEEECH
Confidence 357999999999999999999988899999998863 210 0 10 0122 234321
Q ss_pred CCCCCCCccccCccEEEEecCCccc---HHHHHHHHhCCCcEEEE
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTD---KDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~---~~~~~~~~~~g~~~vvi 123 (265)
.+..++ ....++|.||.|.|.... .+....+.+.|++..++
T Consensus 55 ~~l~~~-~~~~~id~viia~~~~~~~~~~~i~~~l~~~gv~v~~v 98 (141)
T 3nkl_A 55 KYLERL-IKKHCISTVLLAVPSASQVQKKVIIESLAKLHVEVLTI 98 (141)
T ss_dssp GGHHHH-HHHHTCCEEEECCTTSCHHHHHHHHHHHHTTTCEEEEC
T ss_pred HHHHHH-HHHCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCeEEEC
Confidence 122111 112468999999986543 45667777889854443
No 125
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.24 E-value=0.00092 Score=51.59 Aligned_cols=82 Identities=21% Similarity=0.229 Sum_probs=59.3
Q ss_pred ccEEEEEcc----ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~~~V~IiG~----G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
..+|+|+|+ |.+|..+++.|.++. +++..++-.. + .+ .| +++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G-~~v~~Vnp~~---~--------------------------~i--~G--~~~ 67 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHG-YDVYPVNPKY---E--------------------------EV--LG--RKC 67 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTTC---S--------------------------EE--TT--EEC
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCC-CEEEEECCCC---C--------------------------eE--CC--eec
Confidence 468999999 699999999998875 6755443210 0 01 12 223
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+ .++++++ ..+|+++.|+|.....+.++.+.++|++.+++
T Consensus 68 y--~sl~~l~---~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~ 107 (144)
T 2d59_A 68 Y--PSVLDIP---DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWF 107 (144)
T ss_dssp B--SSGGGCS---SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred c--CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEE
Confidence 3 3456663 46999999999999999999999999987766
No 126
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.23 E-value=0.00074 Score=52.23 Aligned_cols=84 Identities=18% Similarity=0.203 Sum_probs=59.0
Q ss_pred ccEEEEEcc----ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~~~V~IiG~----G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
..+|+|+|+ |.+|..+++.|.+.. +++..++ +...++ ++ .| .++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G-~~v~~vn-p~~~g~--------------------------~i--~G--~~~ 60 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQG-YHVIPVS-PKVAGK--------------------------TL--LG--QQG 60 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHT-CCEEEEC-SSSTTS--------------------------EE--TT--EEC
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCC-CEEEEeC-Cccccc--------------------------cc--CC--eec
Confidence 468999999 789999999998765 5644433 321000 11 12 223
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+ .++++++ ..+|+|+.|+|.....+.+..+.++|++.+++
T Consensus 61 ~--~sl~el~---~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i 100 (145)
T 2duw_A 61 Y--ATLADVP---EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWL 100 (145)
T ss_dssp C--SSTTTCS---SCCSEEECCSCSTHHHHHHHHHHHHTCCEEEC
T ss_pred c--CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEE
Confidence 2 3566763 57999999999988888888888889887776
No 127
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=97.22 E-value=0.00038 Score=58.98 Aligned_cols=87 Identities=13% Similarity=0.125 Sum_probs=54.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
++||+|+|+|.+|..+++.|.+.. ++++.+.++. .+....+. ...+ + .+. .
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g-~~~v~~~~~~--~~~~~~~~---------------~~~g--~-------~~~--~ 60 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKG-FRIVQVYSRT--EESARELA---------------QKVE--A-------EYT--T 60 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHT-CCEEEEECSS--HHHHHHHH---------------HHTT--C-------EEE--S
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCC-CeEEEEEeCC--HHHHHHHH---------------HHcC--C-------cee--C
Confidence 479999999999999999998763 6767777764 22111000 0001 1 122 2
Q ss_pred CCCCCCccccCccEEEEecCCcccHHHHHHHHh---CCCcEEEE
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLK---GGAKKVII 123 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~---~g~~~vvi 123 (265)
+++++ ..++|+||.|+|.....+....+.+ .|. +++
T Consensus 61 ~~~~~---~~~~Dvvi~av~~~~~~~v~~~l~~~~~~~~--ivv 99 (266)
T 3d1l_A 61 DLAEV---NPYAKLYIVSLKDSAFAELLQGIVEGKREEA--LMV 99 (266)
T ss_dssp CGGGS---CSCCSEEEECCCHHHHHHHHHHHHTTCCTTC--EEE
T ss_pred CHHHH---hcCCCEEEEecCHHHHHHHHHHHHhhcCCCc--EEE
Confidence 44433 2579999999998876666666554 454 555
No 128
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=97.19 E-value=6.4e-05 Score=64.44 Aligned_cols=86 Identities=15% Similarity=0.013 Sum_probs=45.4
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
||+||+|+|+|.+|..+++.|.++ ++++.+.+++.+ ....+. . ..+ . ..
T Consensus 1 M~m~I~iIG~G~mG~~la~~l~~~--~~v~~v~~~~~~--~~~~~~---~------------~~g---------~-~~-- 49 (276)
T 2i76_A 1 MSLVLNFVGTGTLTRFFLECLKDR--YEIGYILSRSID--RARNLA---E------------VYG---------G-KA-- 49 (276)
T ss_dssp ---CCEEESCCHHHHHHHHTTC------CCCEECSSHH--HHHHHH---H------------HTC---------C-CC--
T ss_pred CCceEEEEeCCHHHHHHHHHHHHc--CcEEEEEeCCHH--HHHHHH---H------------HcC---------C-cc--
Confidence 147999999999999999988766 676566666321 111000 0 001 1 11
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.+++++ ..++|+||.|+|.....+.+..+...|. +++
T Consensus 50 ~~~~~~---~~~~DvVilav~~~~~~~v~~~l~~~~~--ivi 86 (276)
T 2i76_A 50 ATLEKH---PELNGVVFVIVPDRYIKTVANHLNLGDA--VLV 86 (276)
T ss_dssp CSSCCC---CC---CEEECSCTTTHHHHHTTTCCSSC--CEE
T ss_pred CCHHHH---HhcCCEEEEeCChHHHHHHHHHhccCCC--EEE
Confidence 244443 2568999999999876665554433343 444
No 129
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=97.18 E-value=0.0012 Score=57.73 Aligned_cols=88 Identities=14% Similarity=0.068 Sum_probs=53.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCe-EEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~-el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
++||+|||+|.+|..+++.|.+.... ++.+ .++. .+...... +.| . . ....
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~-~dr~--~~~~~~a~----------------~~G--~--~---~~~~-- 84 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYG-YDIN--PESISKAV----------------DLG--I--I---DEGT-- 84 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEE-ECSC--HHHHHHHH----------------HTT--S--C---SEEE--
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEE-EECC--HHHHHHHH----------------HCC--C--c---chhc--
Confidence 47999999999999999999877422 5544 4543 22111110 112 0 0 0121
Q ss_pred CCCCC-CCccccCccEEEEecCCcccHHHHHHHH---hCCCcEEEE
Q 024629 82 RNPEE-IPWAETGAEYVVESTGVFTDKDKAAAHL---KGGAKKVII 123 (265)
Q Consensus 82 ~d~~~-~~~~~~~~DvV~~atp~~~~~~~~~~~~---~~g~~~vvi 123 (265)
.++++ . ..++|+||.|+|.....+.++.+. +.|+ +|+
T Consensus 85 ~~~~~~~---~~~aDvVilavp~~~~~~vl~~l~~~l~~~~--iv~ 125 (314)
T 3ggo_A 85 TSIAKVE---DFSPDFVMLSSPVRTFREIAKKLSYILSEDA--TVT 125 (314)
T ss_dssp SCTTGGG---GGCCSEEEECSCGGGHHHHHHHHHHHSCTTC--EEE
T ss_pred CCHHHHh---hccCCEEEEeCCHHHHHHHHHHHhhccCCCc--EEE
Confidence 34554 3 267999999999987666655543 4565 555
No 130
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.18 E-value=0.0032 Score=53.35 Aligned_cols=34 Identities=12% Similarity=0.190 Sum_probs=28.4
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
||+||.|.|+|++|+.+++.|.++. .+++++...
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r~ 37 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQG-WRIIGTSRN 37 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGT-CEEEEEESC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCC-CEEEEEEcC
Confidence 3579999999999999999999874 788877654
No 131
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=97.17 E-value=0.00046 Score=59.31 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=26.9
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCC-eEEEEEeccC
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDD-VELVAVNDPF 37 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~-~el~~i~~~~ 37 (265)
|+++||+|+|+|.+|..+++.|.++.. .+-+.+.+++
T Consensus 1 M~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~ 38 (280)
T 3tri_A 1 MNTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRS 38 (280)
T ss_dssp -CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCC
Confidence 777899999999999999999987641 1123455553
No 132
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.16 E-value=0.001 Score=55.12 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=29.0
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
|+|++|.|.|+ |.+|+.+++.|.++...+++.+..
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R 56 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFAR 56 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEES
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEc
Confidence 56789999999 999999999999886577777654
No 133
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.10 E-value=0.0007 Score=58.65 Aligned_cols=87 Identities=22% Similarity=0.251 Sum_probs=60.7
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
+.+++|+|+ |.+|+.+++.+.++ ++++++..++....+ ++ .| ++++
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~-g~~~V~~VnP~~~g~--------------------------~i--~G--~~vy-- 59 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLEC-GTKIVGGVTPGKGGQ--------------------------NV--HG--VPVF-- 59 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHT-TCCEEEEECTTCTTC--------------------------EE--TT--EEEE--
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCeEEEEeCCCCCCc--------------------------eE--CC--Eeee--
Confidence 478999999 99999999999887 577665544421110 01 12 3344
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.+.++++- ..++|++++++|+....+.++++.++|++.+|+
T Consensus 60 ~sl~el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi 100 (294)
T 2yv1_A 60 DTVKEAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVV 100 (294)
T ss_dssp SSHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEE
Confidence 24444420 017899999999999999999999999985555
No 134
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.05 E-value=0.0011 Score=57.43 Aligned_cols=87 Identities=18% Similarity=0.232 Sum_probs=60.5
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
+.|+.|+|+ |.+|+.+++.+.++ ++++++..++....+ ++ .| ++++
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~-g~~~v~~VnP~~~g~--------------------------~i--~G--~~vy-- 59 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEY-GTKVVAGVTPGKGGS--------------------------EV--HG--VPVY-- 59 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTC--------------------------EE--TT--EEEE--
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCcEEEEeCCCCCCc--------------------------eE--CC--Eeee--
Confidence 578999999 99999999999887 577665544421110 01 12 3344
Q ss_pred CCCCCCCccccC-ccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 82 RNPEEIPWAETG-AEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~d~~~~~~~~~~-~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.+.++++- ..+ +|++++++|+....+.++.+.++|++.+|+
T Consensus 60 ~sl~el~~-~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi 101 (297)
T 2yv2_A 60 DSVKEALA-EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVV 101 (297)
T ss_dssp SSHHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhh-cCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 24444420 014 899999999999999999999999985555
No 135
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.98 E-value=0.0021 Score=48.21 Aligned_cols=82 Identities=18% Similarity=0.091 Sum_probs=60.8
Q ss_pred ccEEEEEcc----ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~~~V~IiG~----G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
+.+|+|+|+ +..|..+++.|.++. +++..|+-.. ++ + .| .+.
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g-~~V~pVnP~~------------~~-----------------i--~G--~~~ 49 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHG-HEFIPVGRKK------------GE-----------------V--LG--KTI 49 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHT-CCEEEESSSC------------SE-----------------E--TT--EEC
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCC-CeEEEECCCC------------Cc-----------------C--CC--eec
Confidence 458999999 678999999998875 5777665321 00 1 12 123
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEc
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS 124 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS 124 (265)
+ .+.++++ . +|+|+.++|.....+.++++.+.|+|.++++
T Consensus 50 y--~sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~ 89 (122)
T 3ff4_A 50 I--NERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFN 89 (122)
T ss_dssp B--CSCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEEC
T ss_pred c--CChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEEC
Confidence 2 3567774 5 9999999999999999999999999977663
No 136
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.96 E-value=0.0011 Score=54.33 Aligned_cols=35 Identities=31% Similarity=0.339 Sum_probs=28.0
Q ss_pred CC-ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 1 MG-KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~-~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|+ |+||.|.|+ |.+|+.+++.|.++. .+++++...
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~ 37 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRG-FEVTAVVRH 37 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSC
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcC
Confidence 54 579999999 999999999999885 677776543
No 137
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=96.93 E-value=0.0017 Score=57.98 Aligned_cols=93 Identities=20% Similarity=0.227 Sum_probs=56.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
..||+|+|+|.+|+.+++.|.++ .++ .+.++. .+....+. . . . ..+.+ ...
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~--~~V-~V~~R~--~~~a~~la---~---~----------~-------~~~~~-d~~ 66 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE--FDV-YIGDVN--NENLEKVK---E---F----------A-------TPLKV-DAS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT--SEE-EEEESC--HHHHHHHT---T---T----------S-------EEEEC-CTT
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC--CeE-EEEECC--HHHHHHHH---h---h----------C-------CeEEE-ecC
Confidence 47999999999999999999887 554 566663 22211110 0 0 0 00100 001
Q ss_pred CCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEc
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS 124 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS 124 (265)
+.+++.-...++|+|+.|+|...+.+.+..++++|+..+++|
T Consensus 67 ~~~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~~~vD~s 108 (365)
T 2z2v_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp CHHHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTCCEEECC
T ss_pred CHHHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCCeEEEcc
Confidence 111110002478999999998877788888999997433334
No 138
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.90 E-value=0.00059 Score=60.10 Aligned_cols=34 Identities=18% Similarity=0.246 Sum_probs=26.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|+++||+|+|+|.+|..++..|.+.. .++..+ ++
T Consensus 2 m~~mki~iiG~G~~G~~~a~~L~~~g-~~V~~~-~r 35 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGHAFAAYLALKG-QSVLAW-DI 35 (359)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCC-CEEEEE-eC
Confidence 34679999999999999999998764 675544 44
No 139
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.87 E-value=0.0016 Score=56.41 Aligned_cols=32 Identities=28% Similarity=0.438 Sum_probs=26.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++||+|+|+|++|..+++.|.+.. .++... ++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~-dr 38 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAG-LSTWGA-DL 38 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CeEEEE-EC
Confidence 579999999999999999998874 666544 44
No 140
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.86 E-value=0.0021 Score=55.26 Aligned_cols=33 Identities=21% Similarity=0.397 Sum_probs=25.1
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
|+|+||+|+|+|.+|..++..|.+.. .++..+.
T Consensus 1 ~~~m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 33 (316)
T 2ew2_A 1 SNAMKIAIAGAGAMGSRLGIMLHQGG-NDVTLID 33 (316)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhCC-CcEEEEE
Confidence 45679999999999999999998764 5665553
No 141
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.85 E-value=0.0022 Score=49.19 Aligned_cols=84 Identities=14% Similarity=0.076 Sum_probs=59.1
Q ss_pred ccEEEEEcc----ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~~~V~IiG~----G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
..+|+|+|+ |..|..+++.|.++. +++..++-.. .. . ++ .| +++
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G-~~v~~vnp~~-~~------------------~--------~i--~G--~~~ 60 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQG-YRVLPVNPRF-QG------------------E--------EL--FG--EEA 60 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTT-CEEEEECGGG-TT------------------S--------EE--TT--EEC
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCC-CEEEEeCCCc-cc------------------C--------cC--CC--EEe
Confidence 368999999 799999999998874 6644443210 01 0 11 22 233
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+ .++++++ ..+|+++.|+|.....+.++++.+.|+|.+++
T Consensus 61 ~--~sl~el~---~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~ 100 (140)
T 1iuk_A 61 V--ASLLDLK---EPVDILDVFRPPSALMDHLPEVLALRPGLVWL 100 (140)
T ss_dssp B--SSGGGCC---SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEE
T ss_pred c--CCHHHCC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEE
Confidence 3 3456663 57999999999988889999999999987777
No 142
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.84 E-value=0.0016 Score=55.37 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=27.9
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|||.|.|+ |.+|+.+++.|.+.++.++.++...
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~ 34 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRN 34 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESS
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECC
Confidence 37999999 9999999999988766788877654
No 143
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.83 E-value=0.0035 Score=57.87 Aligned_cols=35 Identities=20% Similarity=0.287 Sum_probs=29.2
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCe-EEEEEecc
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~-el~~i~~~ 36 (265)
+++||+|+|+|++|.-++..|.++|+. +++.+.-.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~ 52 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRN 52 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 467999999999999999999988667 87776443
No 144
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.77 E-value=0.002 Score=54.70 Aligned_cols=35 Identities=29% Similarity=0.387 Sum_probs=29.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|+|+||.|.|+|++|+.+++.|.++. .+++++...
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQG-HEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTT-CCEEEEECT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 77789999999999999999999874 677777543
No 145
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.76 E-value=0.00086 Score=59.72 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=26.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++||+|||+|.+|..+++.|.++. .++... ++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G-~~V~v~-dr 53 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG-HECVVY-DL 53 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CCEEEEECchHHHHHHHHHHHhCC-CEEEEE-eC
Confidence 589999999999999999999875 666544 44
No 146
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=96.69 E-value=0.0059 Score=52.94 Aligned_cols=31 Identities=35% Similarity=0.458 Sum_probs=24.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
|+ +||+|+|+|.+|..+...|. . +.++..+.
T Consensus 1 M~-mkI~IiGaGa~G~~~a~~L~-~-g~~V~~~~ 31 (307)
T 3ego_A 1 MS-LKIGIIGGGSVGLLCAYYLS-L-YHDVTVVT 31 (307)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHH-T-TSEEEEEC
T ss_pred CC-CEEEEECCCHHHHHHHHHHh-c-CCceEEEE
Confidence 54 79999999999999999988 4 46766654
No 147
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=96.68 E-value=0.00098 Score=57.29 Aligned_cols=31 Identities=29% Similarity=0.617 Sum_probs=25.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+||+|+|+|.+|..+++.|.++. .++ .+.++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g-~~V-~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAG-YSL-VVSDR 36 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEE-EEECS
T ss_pred ceEEEECchHHHHHHHHHHHhCC-CEE-EEEeC
Confidence 69999999999999999998774 675 44555
No 148
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=96.66 E-value=0.0012 Score=57.66 Aligned_cols=26 Identities=15% Similarity=0.312 Sum_probs=21.5
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCC
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p 26 (265)
|+++||+|||+|.+|..+++.|.+..
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G 45 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAG 45 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCC
Confidence 34679999999999999999998763
No 149
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=96.66 E-value=0.003 Score=55.72 Aligned_cols=36 Identities=31% Similarity=0.420 Sum_probs=30.5
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|+|+||.|.|+ |++|+.+++.|.++++.+|+++...
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCC
Confidence 55789999999 9999999999998866888888654
No 150
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=96.65 E-value=0.0044 Score=53.60 Aligned_cols=30 Identities=37% Similarity=0.644 Sum_probs=25.2
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEE
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVA 32 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~ 32 (265)
|+ .|||+||.|++|..+++.|.++. ++|..
T Consensus 4 Ms-~kIgfIGLG~MG~~mA~~L~~~G-~~V~v 33 (297)
T 4gbj_A 4 MS-EKIAFLGLGNLGTPIAEILLEAG-YELVV 33 (297)
T ss_dssp CC-CEEEEECCSTTHHHHHHHHHHTT-CEEEE
T ss_pred CC-CcEEEEecHHHHHHHHHHHHHCC-CeEEE
Confidence 54 58999999999999999999874 67654
No 151
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=96.65 E-value=0.0024 Score=54.63 Aligned_cols=84 Identities=14% Similarity=0.136 Sum_probs=51.8
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
|+||+|+|+ |.+|..+++.|.++. .++. +.++. .+....+. +.| + ..
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g-~~V~-~~~r~--~~~~~~~~----------------~~g--~-------~~--- 58 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSA-HHLA-AIEIA--PEGRDRLQ----------------GMG--I-------PL--- 58 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSS-SEEE-EECCS--HHHHHHHH----------------HTT--C-------CC---
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CEEE-EEECC--HHHHHHHH----------------hcC--C-------Cc---
Confidence 469999999 999999999998774 6766 44443 21111110 011 1 11
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHh---CCCcEEEE
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLK---GGAKKVII 123 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~---~g~~~vvi 123 (265)
.++.+. ..++|+||.|+|.....+..+.+.. .|. +++
T Consensus 59 ~~~~~~---~~~aDvVi~av~~~~~~~v~~~l~~~l~~~~--ivv 98 (286)
T 3c24_A 59 TDGDGW---IDEADVVVLALPDNIIEKVAEDIVPRVRPGT--IVL 98 (286)
T ss_dssp CCSSGG---GGTCSEEEECSCHHHHHHHHHHHGGGSCTTC--EEE
T ss_pred CCHHHH---hcCCCEEEEcCCchHHHHHHHHHHHhCCCCC--EEE
Confidence 122222 2579999999998776666665543 454 555
No 152
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.65 E-value=0.0014 Score=56.92 Aligned_cols=32 Identities=16% Similarity=0.438 Sum_probs=26.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|+||+|+|+|++|..+++.|.+.. .++... ++
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G-~~V~~~-dr 52 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNG-FKVTVW-NR 52 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CeEEEE-eC
Confidence 679999999999999999999874 566544 44
No 153
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.64 E-value=0.0034 Score=50.14 Aligned_cols=34 Identities=26% Similarity=0.281 Sum_probs=28.9
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
|+.+||.|.|+ |++|+.+++.|.++. .+++.+..
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r 35 (206)
T 1hdo_A 1 MAVKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVR 35 (206)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEe
Confidence 66579999999 999999999999875 67777654
No 154
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=96.63 E-value=0.0012 Score=56.72 Aligned_cols=34 Identities=32% Similarity=0.534 Sum_probs=26.2
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~-~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|+ ++||+|+|+|.+|..+++.|.+.. +++. +.++
T Consensus 1 M~~~~~i~iiG~G~~G~~~a~~l~~~g-~~V~-~~~~ 35 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGKPMAINLLKEG-VTVY-AFDL 35 (301)
T ss_dssp ---CCEEEEECCCTTHHHHHHHHHHTT-CEEE-EECS
T ss_pred CCCCCEEEEECccHHHHHHHHHHHHCC-CeEE-EEeC
Confidence 54 579999999999999999998764 6765 4555
No 155
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.61 E-value=0.0034 Score=51.21 Aligned_cols=35 Identities=20% Similarity=0.267 Sum_probs=27.1
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
|||.+|.|.|+ |.+|+.+++.|.+..+.+++.+..
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r 38 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGR 38 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEES
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEec
Confidence 34445999999 999999999999333578777654
No 156
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=96.60 E-value=0.0053 Score=53.56 Aligned_cols=33 Identities=27% Similarity=0.351 Sum_probs=26.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++||+|+|+|++|..+++.|.+....++... ++
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~-dr 56 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAY-DL 56 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEE-CG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEE-eC
Confidence 4799999999999999999998742565544 44
No 157
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=96.58 E-value=0.00077 Score=56.56 Aligned_cols=25 Identities=20% Similarity=0.426 Sum_probs=21.8
Q ss_pred CccEEEEEccChhHHHHHHHHHcCC
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRD 26 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p 26 (265)
|++||+|+|+|.+|..+++.|.+..
T Consensus 1 M~~~i~iIG~G~mG~~~a~~l~~~g 25 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINKN 25 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTT
T ss_pred CCCeEEEECccHHHHHHHHHHHhCC
Confidence 1479999999999999999998764
No 158
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=96.56 E-value=0.00072 Score=56.99 Aligned_cols=33 Identities=24% Similarity=0.428 Sum_probs=26.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
|+||+|+|+|.+|+.+++.|.+.. .+ +.+.++.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g-~~-v~~~~~~ 35 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTP-HE-LIISGSS 35 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSS-CE-EEEECSS
T ss_pred ccEEEEECCCHHHHHHHHHHHhCC-Ce-EEEECCC
Confidence 469999999999999999998775 44 4566653
No 159
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.56 E-value=0.0019 Score=56.52 Aligned_cols=102 Identities=18% Similarity=0.117 Sum_probs=56.9
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCC-ChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFI-TTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~-~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
|+++||.|.|+ |++|+.+++.|.+++ .++.++..... +......+. . +. ..+ + .+
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~---~----l~------~~~--v-------~~ 64 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGPRSPSKAKIFK---A----LE------DKG--A-------II 64 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSCCCHHHHHHHH---H----HH------HTT--C-------EE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCCCChhHHHHHH---H----HH------hCC--c-------EE
Confidence 44579999999 999999999999886 67777765431 111111000 0 00 011 1 11
Q ss_pred Eec--CCCCCCCcccc--CccEEEEecCCc---ccHHHHHHHHhCC-CcEEEEcC
Q 024629 79 FGV--RNPEEIPWAET--GAEYVVESTGVF---TDKDKAAAHLKGG-AKKVIISA 125 (265)
Q Consensus 79 ~~~--~d~~~~~~~~~--~~DvV~~atp~~---~~~~~~~~~~~~g-~~~vviS~ 125 (265)
+.. .|++.+..... ++|+||.|.+.. .....++.+.+.| +++++.|.
T Consensus 65 ~~~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~ 119 (346)
T 3i6i_A 65 VYGLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSE 119 (346)
T ss_dssp EECCTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECSC
T ss_pred EEeecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeecc
Confidence 111 12222211123 899999998852 3445666777778 88777653
No 160
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.53 E-value=0.0015 Score=56.28 Aligned_cols=32 Identities=25% Similarity=0.345 Sum_probs=26.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|+||+|+|+|++|..+++.|.+.. .++... ++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~-d~ 34 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAG-YLLNVF-DL 34 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCC-CeEEEE-cC
Confidence 579999999999999999999874 566544 44
No 161
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.52 E-value=0.0028 Score=54.64 Aligned_cols=32 Identities=22% Similarity=0.369 Sum_probs=25.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++||+|+|+|++|..+++.|.++. .++... ++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G-~~V~~~-dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWP-GGVTVY-DI 46 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTST-TCEEEE-CS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCC-CeEEEE-eC
Confidence 469999999999999999998874 565544 44
No 162
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=96.51 E-value=0.0025 Score=54.62 Aligned_cols=31 Identities=19% Similarity=0.441 Sum_probs=25.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+||+|+|+|++|..+++.|.++. .++. +.++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G-~~V~-~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG-CSVT-IWNR 32 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEEeecHHHHHHHHHHHHCC-CeEE-EEcC
Confidence 58999999999999999999874 6765 4455
No 163
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=96.51 E-value=0.002 Score=56.13 Aligned_cols=87 Identities=14% Similarity=0.164 Sum_probs=51.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCe-EEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~-el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
++||+|||+|++|..+++.|.+.. . ++. +.++..+.+....+. +.| + ...
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G-~~~V~-~~dr~~~~~~~~~~~----------------~~g--~-------~~~-- 74 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAG-AIDMA-AYDAASAESWRPRAE----------------ELG--V-------SCK-- 74 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHS-CCEEE-EECSSCHHHHHHHHH----------------HTT--C-------EEC--
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CCeEE-EEcCCCCHHHHHHHH----------------HCC--C-------EEe--
Confidence 579999999999999999998774 5 444 445521011111000 112 1 121
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHh---CCCcEEEE
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLK---GGAKKVII 123 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~---~g~~~vvi 123 (265)
.++++. ..++|+||.|+|.....+.+..+.+ .|. +++
T Consensus 75 ~~~~e~---~~~aDvVi~~vp~~~~~~~~~~l~~~l~~~~--ivv 114 (312)
T 3qsg_A 75 ASVAEV---AGECDVIFSLVTAQAALEVAQQAGPHLCEGA--LYA 114 (312)
T ss_dssp SCHHHH---HHHCSEEEECSCTTTHHHHHHHHGGGCCTTC--EEE
T ss_pred CCHHHH---HhcCCEEEEecCchhHHHHHHhhHhhcCCCC--EEE
Confidence 233332 2578999999998877666655543 454 555
No 164
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=96.51 E-value=0.0013 Score=55.32 Aligned_cols=26 Identities=31% Similarity=0.639 Sum_probs=22.9
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCC
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p 26 (265)
|+++||+|+|+|.+|..+++.|.+..
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g 27 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANAN 27 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCC
Confidence 66789999999999999999987653
No 165
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.50 E-value=0.0019 Score=56.34 Aligned_cols=32 Identities=25% Similarity=0.278 Sum_probs=26.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++||+|+|+|++|..+++.|.+.. .++... ++
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~-dr 62 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAG-YALQVW-NR 62 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CCEEEEECccHHHHHHHHHHHhCC-CeEEEE-cC
Confidence 469999999999999999998874 675544 44
No 166
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.50 E-value=0.0027 Score=54.50 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=28.4
Q ss_pred CC-ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 1 MG-KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~-~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|+ |++|.|.|+ |.+|+.+++.|.++. .++.++...
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 37 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRP 37 (313)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCS
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEECC
Confidence 65 679999999 999999999999874 677776543
No 167
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.47 E-value=0.0095 Score=48.38 Aligned_cols=31 Identities=29% Similarity=0.398 Sum_probs=26.8
Q ss_pred EEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 5 KIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 5 ~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
||.|.|+ |.+|+.+++.|.++. .+++++...
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R~ 33 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTD-YQIYAGARK 33 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSS-CEEEEEESS
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 8999999 999999999999874 788777643
No 168
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=96.44 E-value=0.00099 Score=58.55 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=26.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
|+++||+|+|+|.+|..+...|.+.. .++..+.
T Consensus 1 M~~mkI~IiGaG~~G~~~a~~L~~~g-~~V~~~~ 33 (335)
T 3ghy_A 1 MSLTRICIVGAGAVGGYLGARLALAG-EAINVLA 33 (335)
T ss_dssp -CCCCEEEESCCHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCC-CEEEEEE
Confidence 77789999999999999999998763 4555443
No 169
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.37 E-value=0.0026 Score=54.45 Aligned_cols=102 Identities=19% Similarity=0.226 Sum_probs=57.2
Q ss_pred CC-ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCCC---hhhhhhheeeecccCcccccceeeeCCceEEECCEE
Q 024629 1 MG-KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFIT---TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP 75 (265)
Q Consensus 1 m~-~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~~---~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~ 75 (265)
|+ |++|.|.|+ |.+|+.+++.|.++. .++.++...... ......+. .+. ..+ +
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~~~-------~l~------~~~--v------ 58 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTASSNSEKAQLLE-------SFK------ASG--A------ 58 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTTTTHHHHHHHH-------HHH------TTT--C------
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEECCcccccCHHHHHHHH-------HHH------hCC--C------
Confidence 65 679999999 999999999999875 666665443211 11110000 000 001 1
Q ss_pred EEEEec--CCCCCCCccccCccEEEEecCCc---ccHHHHHHHHhCC-CcEEEEcC
Q 024629 76 VTVFGV--RNPEEIPWAETGAEYVVESTGVF---TDKDKAAAHLKGG-AKKVIISA 125 (265)
Q Consensus 76 i~~~~~--~d~~~~~~~~~~~DvV~~atp~~---~~~~~~~~~~~~g-~~~vviS~ 125 (265)
.++.. .|++.+.-...++|+||.|++.. .....++.+.++| ++++|.|.
T Consensus 59 -~~v~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~ 113 (308)
T 1qyc_A 59 -NIVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSE 113 (308)
T ss_dssp -EEECCCTTCHHHHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEECSC
T ss_pred -EEEEeccCCHHHHHHHHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCceEeecc
Confidence 11111 12222211124789999998853 3456667777777 88777653
No 170
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.36 E-value=0.032 Score=45.72 Aligned_cols=34 Identities=18% Similarity=0.293 Sum_probs=28.2
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+.+||.|.|+ |.+|+.+++.|.++. .+++++...
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G-~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKG-HEPVAMVRN 54 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCC-CeEEEEECC
Confidence 3579999999 999999999999874 687777644
No 171
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=96.36 E-value=0.0053 Score=55.91 Aligned_cols=30 Identities=37% Similarity=0.478 Sum_probs=25.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
++||+|+|+|++|..++..|.+ +.+++++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~--G~~V~~~D 65 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ--NHEVVALD 65 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TSEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHc--CCeEEEEe
Confidence 5799999999999999998886 57877654
No 172
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=96.31 E-value=0.0017 Score=55.67 Aligned_cols=30 Identities=23% Similarity=0.392 Sum_probs=24.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
|+||+|+|+|.+|..+++.|.+.. .++...
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~ 32 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAG-HQLHVT 32 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTT-CEEEEC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCC-CEEEEE
Confidence 469999999999999999998764 676544
No 173
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=96.24 E-value=0.002 Score=57.19 Aligned_cols=30 Identities=23% Similarity=0.216 Sum_probs=24.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
|+||+|+|+|.+|..++..|.+.. .++..+
T Consensus 15 M~kI~iIG~G~mG~~la~~L~~~G-~~V~~~ 44 (366)
T 1evy_A 15 LNKAVVFGSGAFGTALAMVLSKKC-REVCVW 44 (366)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTTE-EEEEEE
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC-CEEEEE
Confidence 349999999999999999998653 565544
No 174
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.21 E-value=0.0047 Score=56.92 Aligned_cols=90 Identities=9% Similarity=0.138 Sum_probs=53.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCC-ChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI-TTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~-~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
+.||.|+|+|.+|+.+++.|.++++++++.+ ++.. ..+.++ +. .+ + ..+ ....
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~-~R~~~ka~~la-----~~-------------~~--~----~~~-~~D~ 76 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDDINVTVA-CRTLANAQALA-----KP-------------SG--S----KAI-SLDV 76 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTTEEEEEE-ESSHHHHHHHH-----GG-------------GT--C----EEE-ECCT
T ss_pred CCEEEEECChHHHHHHHHHHHhCCCCeEEEE-ECCHHHHHHHH-----Hh-------------cC--C----cEE-EEec
Confidence 5789999999999999999999877885444 4431 122211 00 01 0 000 1110
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCC
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~ 118 (265)
.|.+++.-...++|+||.|+|..........+++.|.
T Consensus 77 ~d~~~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~ 113 (467)
T 2axq_A 77 TDDSALDKVLADNDVVISLIPYTFHPNVVKSAIRTKT 113 (467)
T ss_dssp TCHHHHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHcCCCEEEECCchhhhHHHHHHHHhcCC
Confidence 1111110001478999999998876666777788886
No 175
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=96.21 E-value=0.0043 Score=52.75 Aligned_cols=87 Identities=15% Similarity=0.102 Sum_probs=50.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCC-eEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 4 VKIGINGFGRIGRLVARVILQRDD-VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~-~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
+||+|+|+|.+|..+++.|.+... .++.. .++. .+....+. +.| + . .... .
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~-~d~~--~~~~~~~~----------------~~g--~--~---~~~~--~ 53 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYG-YDIN--PESISKAV----------------DLG--I--I---DEGT--T 53 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEE-ECSC--HHHHHHHH----------------HTT--S--C---SEEE--S
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEE-EeCC--HHHHHHHH----------------HCC--C--c---cccc--C
Confidence 589999999999999999987641 26544 4442 21111000 011 0 0 0111 2
Q ss_pred CCCCCCcccc-CccEEEEecCCcccHHHHHHHH---hCCCcEEEE
Q 024629 83 NPEEIPWAET-GAEYVVESTGVFTDKDKAAAHL---KGGAKKVII 123 (265)
Q Consensus 83 d~~~~~~~~~-~~DvV~~atp~~~~~~~~~~~~---~~g~~~vvi 123 (265)
++++. .. ++|+||.|+|.....+.+..+. +.+. +++
T Consensus 54 ~~~~~---~~~~aDvVilavp~~~~~~v~~~l~~~l~~~~--iv~ 93 (281)
T 2g5c_A 54 SIAKV---EDFSPDFVMLSSPVRTFREIAKKLSYILSEDA--TVT 93 (281)
T ss_dssp CGGGG---GGTCCSEEEECSCHHHHHHHHHHHHHHSCTTC--EEE
T ss_pred CHHHH---hcCCCCEEEEcCCHHHHHHHHHHHHhhCCCCc--EEE
Confidence 33332 25 7999999999887666655443 3454 444
No 176
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=96.20 E-value=0.012 Score=50.93 Aligned_cols=34 Identities=35% Similarity=0.447 Sum_probs=26.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
|||+|+|+|.+|..++-+|..++.+.=..+.|..
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~ 34 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 5899999999999999988877766444555653
No 177
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.19 E-value=0.0092 Score=51.92 Aligned_cols=91 Identities=19% Similarity=0.229 Sum_probs=50.5
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhh-heeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTY-MFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~-l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
|+ +||+|+|+|.+|..+...|.+.. .++..+. +.. .+.+.. .+..++. ..+ ...+. .+.++
T Consensus 1 M~-mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~-r~~-~~~i~~~Gl~~~~~-----------~~g-~~~~~--~~~~~ 62 (320)
T 3i83_A 1 MS-LNILVIGTGAIGSFYGALLAKTG-HCVSVVS-RSD-YETVKAKGIRIRSA-----------TLG-DYTFR--PAAVV 62 (320)
T ss_dssp ---CEEEEESCCHHHHHHHHHHHHTT-CEEEEEC-STT-HHHHHHHCEEEEET-----------TTC-CEEEC--CSCEE
T ss_pred CC-CEEEEECcCHHHHHHHHHHHhCC-CeEEEEe-CCh-HHHHHhCCcEEeec-----------CCC-cEEEe--eeeeE
Confidence 54 79999999999999999998764 5666554 321 222110 0111110 001 01000 11122
Q ss_pred ecCCCCCCCccccCccEEEEecCCcccHHHHHHHH
Q 024629 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHL 114 (265)
Q Consensus 80 ~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~ 114 (265)
.+++++ ..++|+||.|++.....+.++.+.
T Consensus 63 --~~~~~~---~~~~DlVilavK~~~~~~~l~~l~ 92 (320)
T 3i83_A 63 --RSAAEL---ETKPDCTLLCIKVVEGADRVGLLR 92 (320)
T ss_dssp --SCGGGC---SSCCSEEEECCCCCTTCCHHHHHT
T ss_pred --CCHHHc---CCCCCEEEEecCCCChHHHHHHHH
Confidence 344444 137899999999987776666554
No 178
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=96.18 E-value=0.005 Score=52.28 Aligned_cols=78 Identities=18% Similarity=0.147 Sum_probs=47.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecCC
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~d 83 (265)
+||+|+|+|.+|..+++.|.+.. .++... ++. .+....+. +.| + . .... .+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~-~~~--~~~~~~~~----------------~~g--~--~---~~~~--~~ 51 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG-HYLIGV-SRQ--QSTCEKAV----------------ERQ--L--V---DEAG--QD 51 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CSC--HHHHHHHH----------------HTT--S--C---SEEE--SC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC-CEEEEE-ECC--HHHHHHHH----------------hCC--C--C---cccc--CC
Confidence 38999999999999999998774 575554 442 22111110 011 1 0 0121 23
Q ss_pred CCCCCccccCccEEEEecCCcccHHHHHHHH
Q 024629 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHL 114 (265)
Q Consensus 84 ~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~ 114 (265)
++++ .++|+||.|+|.....+.+..+.
T Consensus 52 ~~~~----~~~D~vi~av~~~~~~~~~~~l~ 78 (279)
T 2f1k_A 52 LSLL----QTAKIIFLCTPIQLILPTLEKLI 78 (279)
T ss_dssp GGGG----TTCSEEEECSCHHHHHHHHHHHG
T ss_pred HHHh----CCCCEEEEECCHHHHHHHHHHHH
Confidence 3332 46899999999876666666553
No 179
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=96.17 E-value=0.0044 Score=52.07 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=24.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+||+|+|+|.+|..+++.|.+....++ .+.++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v-~~~~r 32 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRI-YIANR 32 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEE-EEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeE-EEECC
Confidence 389999999999999999886531344 45555
No 180
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=96.15 E-value=0.0027 Score=55.04 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=25.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++||+|+|+|.+|..+++.|.+.. .++. +.++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g-~~V~-~~~~ 61 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMG-HTVT-VWNR 61 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred CCeEEEEcccHHHHHHHHHHHhCC-CEEE-EEeC
Confidence 479999999999999999998764 5654 4444
No 181
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=96.13 E-value=0.006 Score=53.62 Aligned_cols=25 Identities=28% Similarity=0.437 Sum_probs=21.4
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQR 25 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~ 25 (265)
|+++||+|+|+|.+|..++..|.+.
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~ 30 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGN 30 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhc
Confidence 5567999999999999999988765
No 182
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=96.12 E-value=0.0052 Score=50.40 Aligned_cols=32 Identities=25% Similarity=0.397 Sum_probs=25.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++||+|+|+|.+|+.+++.|.++. .++.. .++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g-~~V~~-~~r 59 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSG-FKVVV-GSR 59 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTT-CCEEE-EES
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC-CEEEE-EeC
Confidence 468999999999999999998774 56554 344
No 183
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.09 E-value=0.02 Score=46.06 Aligned_cols=32 Identities=34% Similarity=0.460 Sum_probs=27.3
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|||.|.|+ |.+|+.+++.|.++. .+++++...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG-HEVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC-CEEEEEEcC
Confidence 37999999 999999999999885 788877654
No 184
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=96.09 E-value=0.0096 Score=50.05 Aligned_cols=85 Identities=16% Similarity=0.157 Sum_probs=50.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecCC
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~d 83 (265)
+||+|+|+|.+|..+++.|.+.. +++.. .++..+.+....+. +.| + . .+
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g-~~V~~-~~~~~~~~~~~~~~----------------~~g--~-------~----~~ 49 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRG-VEVVT-SLEGRSPSTIERAR----------------TVG--V-------T----ET 49 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEE-CCTTCCHHHHHHHH----------------HHT--C-------E----EC
T ss_pred CeEEEEechHHHHHHHHHHHHCC-CeEEE-eCCccCHHHHHHHH----------------HCC--C-------c----CC
Confidence 38999999999999999998764 57655 44421111111000 012 1 1 12
Q ss_pred CCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 84 ~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
++++ ..++|+||.|+|.....+.+..+.+...+ +++
T Consensus 50 ~~~~---~~~aDvvi~~v~~~~~~~~~~~~~~~~~~-~vi 85 (264)
T 1i36_A 50 SEED---VYSCPVVISAVTPGVALGAARRAGRHVRG-IYV 85 (264)
T ss_dssp CHHH---HHTSSEEEECSCGGGHHHHHHHHHTTCCS-EEE
T ss_pred HHHH---HhcCCEEEEECCCHHHHHHHHHHHHhcCc-EEE
Confidence 3332 25789999999987666666655543323 444
No 185
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=96.06 E-value=0.0049 Score=57.00 Aligned_cols=32 Identities=31% Similarity=0.436 Sum_probs=25.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
|++.||+|+|+|.+|..+++.|.++. ++|...
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G-~~V~v~ 44 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRG-YTVSIF 44 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTT-CCEEEE
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCC-CeEEEE
Confidence 77899999999999999999999774 666544
No 186
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=96.04 E-value=0.007 Score=53.73 Aligned_cols=30 Identities=27% Similarity=0.304 Sum_probs=24.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
++||+|+|+|.+|..++..|.+.. .++...
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G-~~V~l~ 58 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG-QKVRLW 58 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT-CCEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCC-CeEEEE
Confidence 579999999999999999998763 454433
No 187
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.03 E-value=0.0089 Score=54.76 Aligned_cols=32 Identities=19% Similarity=0.431 Sum_probs=26.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
|+ +||+|+|+|++|..++..|.+.. .+++.+.
T Consensus 1 M~-mkI~VIG~G~vG~~lA~~La~~G-~~V~~~D 32 (450)
T 3gg2_A 1 MS-LDIAVVGIGYVGLVSATCFAELG-ANVRCID 32 (450)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CC-CEEEEECcCHHHHHHHHHHHhcC-CEEEEEE
Confidence 54 79999999999999999998874 6777553
No 188
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=96.02 E-value=0.0049 Score=53.10 Aligned_cols=96 Identities=17% Similarity=0.107 Sum_probs=55.6
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccCC-ChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe-
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFI-TTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG- 80 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~~-~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~- 80 (265)
.||.|.|+ |.+|+.+++.|.++. .++.++..... ..+.+..+ . ..+ + .++.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~l----------~------~~~--v-------~~v~~ 65 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTRPNSSKTTLLDEF----------Q------SLG--A-------IIVKG 65 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECTTCSCHHHHHHH----------H------HTT--C-------EEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHCC-CcEEEEECCCCchhhHHHHh----------h------cCC--C-------EEEEe
Confidence 48999999 999999999999875 67776654321 11110000 0 001 1 1111
Q ss_pred -cCCCCCCCccccCccEEEEecCCc---ccHHHHHHHHhCC-CcEEEEcC
Q 024629 81 -VRNPEEIPWAETGAEYVVESTGVF---TDKDKAAAHLKGG-AKKVIISA 125 (265)
Q Consensus 81 -~~d~~~~~~~~~~~DvV~~atp~~---~~~~~~~~~~~~g-~~~vviS~ 125 (265)
-.|++.+.-...++|+||.|++.. .....++.+.+.| .+++|.|.
T Consensus 66 Dl~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~ 115 (318)
T 2r6j_A 66 ELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSD 115 (318)
T ss_dssp CTTCHHHHHHHHTTCSEEEECCCGGGSTTHHHHHHHHHHHCCCCEEECSC
T ss_pred cCCCHHHHHHHHcCCCEEEECCchhhhHHHHHHHHHHHhcCCCCEEEeec
Confidence 112222211125789999998842 3455667777777 88777654
No 189
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.00 E-value=0.0019 Score=55.33 Aligned_cols=31 Identities=16% Similarity=0.354 Sum_probs=24.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+||+|+|+|++|..+++.|.++. .++... ++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~-dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG-FDVTVW-NR 32 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT-CCEEEE-CS
T ss_pred CeEEEEccCHHHHHHHHHHHHCC-CeEEEE-cC
Confidence 58999999999999999998763 555544 44
No 190
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=95.99 E-value=0.0052 Score=56.70 Aligned_cols=34 Identities=18% Similarity=0.393 Sum_probs=27.4
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|+++||+|+|+|.+|..+++.|.++. +++. +.++
T Consensus 3 m~~~~IgvIG~G~mG~~lA~~L~~~G-~~V~-v~dr 36 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKNLALNVESRG-YTVA-IYNR 36 (474)
T ss_dssp CTTBSEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred CCCCcEEEEeeHHHHHHHHHHHHhCC-CEEE-EEcC
Confidence 65689999999999999999998874 5654 4444
No 191
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=95.98 E-value=0.014 Score=52.33 Aligned_cols=32 Identities=25% Similarity=0.348 Sum_probs=26.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
|+||+|+|+|.+|..++..|....+.++..+.
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 36999999999999999998764457776554
No 192
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=95.97 E-value=0.0091 Score=54.71 Aligned_cols=93 Identities=10% Similarity=0.098 Sum_probs=50.2
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
|++.+|.|+|+|.+|+.+++.|.+.. .++ .+.++. ......+. ..+. + . ..+ ...
T Consensus 1 M~~k~VlViGaG~iG~~ia~~L~~~G-~~V-~v~~R~--~~~a~~la------~~~~--------~--~----~~~-~~D 55 (450)
T 1ff9_A 1 MATKSVLMLGSGFVTRPTLDVLTDSG-IKV-TVACRT--LESAKKLS------AGVQ--------H--S----TPI-SLD 55 (450)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHTTT-CEE-EEEESS--HHHHHHTT------TTCT--------T--E----EEE-ECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCc-CEE-EEEECC--HHHHHHHH------HhcC--------C--c----eEE-Eee
Confidence 77789999999999999999999754 674 445553 21111010 0000 0 0 000 001
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCC
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~ 118 (265)
..|.+++.-...++|+||.|+|...+.+....+++.|.
T Consensus 56 v~d~~~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~ 93 (450)
T 1ff9_A 56 VNDDAALDAEVAKHDLVISLIPYTFHATVIKSAIRQKK 93 (450)
T ss_dssp TTCHHHHHHHHTTSSEEEECCC--CHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHcCCcEEEECCccccchHHHHHHHhCCC
Confidence 01111110001478999999998776666667777774
No 193
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.96 E-value=0.0095 Score=44.67 Aligned_cols=31 Identities=23% Similarity=0.483 Sum_probs=25.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
+.+|.|+|+|.+|+.+++.|.+.. .+++.+.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g-~~v~~~d 36 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMG-HEVLAVD 36 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 457999999999999999998774 5655543
No 194
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.95 E-value=0.0058 Score=51.15 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=26.3
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+.+||+|+|+|.+|..+++.|.++. .++... ++
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G-~~V~~~-~r 50 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLG-HEVTIG-TR 50 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-ES
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CEEEEE-eC
Confidence 3589999999999999999998874 566544 44
No 195
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.88 E-value=0.0061 Score=52.01 Aligned_cols=34 Identities=26% Similarity=0.305 Sum_probs=28.4
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+++|.|.|+ |.+|+.+++.|.+++..++.++...
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~ 39 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRN 39 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcC
Confidence 478999999 9999999999988754777777643
No 196
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.88 E-value=0.011 Score=44.60 Aligned_cols=32 Identities=16% Similarity=0.177 Sum_probs=26.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
|.+|.|+|+|++|+.+++.|.++. .+++.+..
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g-~~V~~id~ 37 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAG-KKVLAVDK 37 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CeEEEEEC
Confidence 468999999999999999999874 67776643
No 197
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=95.87 E-value=0.01 Score=52.03 Aligned_cols=30 Identities=27% Similarity=0.388 Sum_probs=26.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
.+|||+|+|.+|+.+++.|... ++++.+..
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~-G~~V~~~d 167 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASAL-GMHVIGVN 167 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhC-CCEEEEEC
Confidence 6899999999999999999877 48877654
No 198
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.80 E-value=0.017 Score=49.42 Aligned_cols=34 Identities=24% Similarity=0.383 Sum_probs=27.8
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|+ +||.|.|+ |++|+.+++.|.++. .++.++...
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 35 (311)
T 3m2p_A 1 MS-LKIAVTGGTGFLGQYVVESIKNDG-NTPIILTRS 35 (311)
T ss_dssp -C-CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeCC
Confidence 54 79999999 999999999999885 677777543
No 199
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=95.75 E-value=0.014 Score=50.74 Aligned_cols=87 Identities=22% Similarity=0.169 Sum_probs=60.2
Q ss_pred ccEEEEE-cc-ChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 3 KVKIGIN-GF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~~~V~Ii-G~-G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
..+++|+ |+ |..|..+++.|.++. +++++..++....+ + +.| ++++
T Consensus 13 ~~siaVV~Gasg~~G~~~~~~l~~~G-~~~v~~VnP~~~g~--------------------------~--i~G--~~vy- 60 (305)
T 2fp4_A 13 KNTKVICQGFTGKQGTFHSQQALEYG-TNLVGGTTPGKGGK--------------------------T--HLG--LPVF- 60 (305)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECTTCTTC--------------------------E--ETT--EEEE-
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHCC-CcEEEEeCCCcCcc--------------------------e--ECC--eeee-
Confidence 3568888 99 999999999988874 77665554421110 0 122 3344
Q ss_pred cCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
.+.++++- ..++|+++.++|.....+.+.++.++|++.+++
T Consensus 61 -~sl~el~~-~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~ 101 (305)
T 2fp4_A 61 -NTVKEAKE-QTGATASVIYVPPPFAAAAINEAIDAEVPLVVC 101 (305)
T ss_dssp -SSHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred -chHHHhhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 23444420 116999999999999999999999999987555
No 200
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=95.72 E-value=0.0068 Score=51.56 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=24.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+||+|+|+|.+|..+++.|.+ +.++. +.++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~--g~~V~-~~~~ 31 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR--RFPTL-VWNR 31 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT--TSCEE-EECS
T ss_pred CeEEEEcccHHHHHHHHHHhC--CCeEE-EEeC
Confidence 589999999999999999987 46754 4454
No 201
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.69 E-value=0.0097 Score=51.60 Aligned_cols=32 Identities=19% Similarity=0.348 Sum_probs=23.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
|+ +||+|+|+|.+|..+...|.+.. .++..+.
T Consensus 1 M~-mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~ 32 (312)
T 3hn2_A 1 MS-LRIAIVGAGALGLYYGALLQRSG-EDVHFLL 32 (312)
T ss_dssp ----CEEEECCSTTHHHHHHHHHHTS-CCEEEEC
T ss_pred CC-CEEEEECcCHHHHHHHHHHHHCC-CeEEEEE
Confidence 54 79999999999999999998763 4555544
No 202
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=95.67 E-value=0.0057 Score=52.74 Aligned_cols=32 Identities=22% Similarity=0.453 Sum_probs=25.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCC----C-eEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRD----D-VELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p----~-~el~~i~ 34 (265)
++||+|+|+|.+|..++..|.+.+ + .++..+.
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~ 44 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIA 44 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEE
Confidence 479999999999999999888651 3 5666553
No 203
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.67 E-value=0.0034 Score=54.41 Aligned_cols=32 Identities=19% Similarity=0.513 Sum_probs=25.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++||+|+|+|.+|..+++.|.+.. +++... ++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G-~~V~~~-dr 40 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQG-KRVAIW-NR 40 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEEEE-eC
Confidence 479999999999999999998874 565544 44
No 204
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.66 E-value=0.0089 Score=52.33 Aligned_cols=35 Identities=31% Similarity=0.429 Sum_probs=27.4
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|+++||+|+|+|.+|..++..|..++..+++ +.|.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~-l~Di 37 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVV-LFDI 37 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEE-EECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEE-EEeC
Confidence 6678999999999999999998877533544 4444
No 205
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=95.65 E-value=0.0053 Score=52.53 Aligned_cols=30 Identities=23% Similarity=0.582 Sum_probs=24.3
Q ss_pred EEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 5 ~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
||+|+|+|.+|..+++.|.+.. .++. +.++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g-~~V~-~~~~ 31 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHG-YPLI-IYDV 31 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTT-CCEE-EECS
T ss_pred eEEEEeccHHHHHHHHHHHHCC-CEEE-EEeC
Confidence 7999999999999999998764 5654 4444
No 206
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.63 E-value=0.0041 Score=47.45 Aligned_cols=32 Identities=22% Similarity=0.147 Sum_probs=27.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
.||+|+|+|.+|+.+++.|... +++ +.+.++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~-g~~-v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP-QYK-VTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT-TCE-EEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCE-EEEEcCC
Confidence 6899999999999999988875 588 7777764
No 207
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.62 E-value=0.017 Score=50.30 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=28.9
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+++||-|.|+ |++|+.+++.|.++. .+++++...
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDNF 58 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 4689999999 999999999999875 788777654
No 208
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=95.60 E-value=0.03 Score=48.64 Aligned_cols=89 Identities=15% Similarity=0.144 Sum_probs=49.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
++||+|+|+|.+|..+...|.+.. .++..+ .+....+.+.. . +......+..+.. .+... .
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G-~~V~l~-~~~~~~~~i~~-------~-----g~~~~~~~~~~~~---~~~~~--~ 79 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAG-HEVILI-ARPQHVQAIEA-------T-----GLRLETQSFDEQV---KVSAS--S 79 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTT-CEEEEE-CCHHHHHHHHH-------H-----CEEEECSSCEEEE---CCEEE--S
T ss_pred CCcEEEECcCHHHHHHHHHHHHCC-CeEEEE-EcHhHHHHHHh-------C-----CeEEEcCCCcEEE---eeeee--C
Confidence 579999999999999999998764 566655 33212222110 0 0000000101111 11222 3
Q ss_pred CCCCCCccccCccEEEEecCCcccHHHHHHHH
Q 024629 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHL 114 (265)
Q Consensus 83 d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~ 114 (265)
+++++ .++|+||.|++.....+.++.+.
T Consensus 80 ~~~~~----~~~D~vilavk~~~~~~~l~~l~ 107 (318)
T 3hwr_A 80 DPSAV----QGADLVLFCVKSTDTQSAALAMK 107 (318)
T ss_dssp CGGGG----TTCSEEEECCCGGGHHHHHHHHT
T ss_pred CHHHc----CCCCEEEEEcccccHHHHHHHHH
Confidence 44433 57899999999986666665543
No 209
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=95.59 E-value=0.0069 Score=53.32 Aligned_cols=32 Identities=25% Similarity=0.332 Sum_probs=25.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
.+||+|+|+|.+|..+++.|.+.. ++++ +.++
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G-~~V~-~~~~ 47 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSG-VDVT-VGLR 47 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTT-CCEE-EECC
T ss_pred CCEEEEECchHHHHHHHHHHHHCc-CEEE-EEEC
Confidence 468999999999999999998764 5655 3444
No 210
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=95.57 E-value=0.1 Score=45.13 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=27.5
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 2 ~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
++++|.|.|+ |++|+.+++.|.+.. .+++++..
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDG-HEVTVVDN 59 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 4679999999 999999999999874 67777754
No 211
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=95.52 E-value=0.0081 Score=52.04 Aligned_cols=32 Identities=25% Similarity=0.312 Sum_probs=25.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|.|||+||.|.+|..+++.|.+.. +++.. .++
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G-~~v~v-~dr 34 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAG-YLLNV-FDL 34 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT-CEEEE-ECS
T ss_pred cCEEEEeeehHHHHHHHHHHHhCC-CeEEE-EcC
Confidence 459999999999999999998874 66554 444
No 212
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.52 E-value=0.014 Score=50.08 Aligned_cols=31 Identities=23% Similarity=0.362 Sum_probs=25.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
..+|+|+|+|.+|+.+++.|.... +++.+..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d 185 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALG-AKVKVGA 185 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC-CEEEEEE
Confidence 368999999999999999998774 6765543
No 213
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.51 E-value=0.0076 Score=51.90 Aligned_cols=100 Identities=17% Similarity=0.168 Sum_probs=56.5
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccC-CC--hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPF-IT--TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~-~~--~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
|++|.|.|+ |.+|+.+++.|.++. .++.++.... .. ......+. . +. ..+ + .+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~l~---~----~~------~~~--v-------~~ 60 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS-HPTFIYARPLTPDSTPSSVQLRE---E----FR------SMG--V-------TI 60 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECCCCTTCCHHHHHHHH---H----HH------HTT--C-------EE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC-CcEEEEECCcccccChHHHHHHH---H----hh------cCC--c-------EE
Confidence 468999999 999999999999874 6777665432 10 11110000 0 00 001 1 11
Q ss_pred Ee--cCCCCCCCccccCccEEEEecCCc---ccHHHHHHHHhCC-CcEEEEcC
Q 024629 79 FG--VRNPEEIPWAETGAEYVVESTGVF---TDKDKAAAHLKGG-AKKVIISA 125 (265)
Q Consensus 79 ~~--~~d~~~~~~~~~~~DvV~~atp~~---~~~~~~~~~~~~g-~~~vviS~ 125 (265)
+. -.|++.+.-...++|+||.|++.. .....++.+.+.| .+++|.|.
T Consensus 61 v~~D~~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~ 113 (321)
T 3c1o_A 61 IEGEMEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSD 113 (321)
T ss_dssp EECCTTCHHHHHHHHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEECSC
T ss_pred EEecCCCHHHHHHHHcCCCEEEECCCccchhhHHHHHHHHHHhCCccEEeccc
Confidence 11 112222211125789999998853 3556677777778 88777654
No 214
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.47 E-value=0.034 Score=42.73 Aligned_cols=32 Identities=31% Similarity=0.445 Sum_probs=26.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
..+|.|+|+|.+|+.+++.|.... .+++.+..
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g-~~V~vid~ 50 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSG-HSVVVVDK 50 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC-CeEEEEEC
Confidence 478999999999999999998874 57766643
No 215
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.47 E-value=0.026 Score=45.69 Aligned_cols=32 Identities=31% Similarity=0.430 Sum_probs=27.0
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|||.|.|+ |.+|+.+++.|.++. .+++++...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG-HEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC-CEEEEEEec
Confidence 37999999 999999999999884 687777543
No 216
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=95.42 E-value=0.016 Score=51.30 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=25.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
.+|||+|+|.||+.+++.|... ++++.+..
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~-G~~V~~~d 194 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPF-GCNLLYHD 194 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-CCEEEEEC
T ss_pred CEEeEEEeCHHHHHHHHHHHHC-CCEEEEeC
Confidence 6899999999999999999876 47866543
No 217
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=95.40 E-value=0.014 Score=51.81 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=20.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcC
Q 024629 3 KVKIGINGFGRIGRLVARVILQR 25 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~ 25 (265)
|+||+|+|+|.+|..++..|.+.
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHc
Confidence 46999999999999999988754
No 218
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.39 E-value=0.0063 Score=51.95 Aligned_cols=32 Identities=28% Similarity=0.265 Sum_probs=26.3
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
|++|.|.|+ |.+|+.+++.|.++. .++.++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 34 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAG-NPTYALVR 34 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHT-CCEEEEEC
T ss_pred CcEEEEECCCchHHHHHHHHHHhCC-CcEEEEEC
Confidence 468999999 999999999998774 56666654
No 219
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.39 E-value=0.013 Score=50.61 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=25.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
..+|+|+|+|.+|+.+++.|.... +++....
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d 187 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALG-ANVKVGA 187 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEEcccHHHHHHHHHHHHCC-CEEEEEE
Confidence 368999999999999999998774 6766553
No 220
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=95.39 E-value=0.01 Score=51.90 Aligned_cols=30 Identities=17% Similarity=0.334 Sum_probs=24.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
.+||+|+|+|.+|..+.+.|.+.. .++...
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G-~~V~~~ 43 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENG-EEVILW 43 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCC-CeEEEE
Confidence 589999999999999999988763 465544
No 221
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.37 E-value=0.026 Score=48.66 Aligned_cols=29 Identities=31% Similarity=0.389 Sum_probs=24.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
.||||+|+|.||..+++.|. . +++++...
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d 41 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S-KHEVVLQD 41 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-TSEEEEEC
T ss_pred CeEEEEeeCHHHHHHHHHHH-c-CCEEEEEE
Confidence 69999999999999999999 6 57766553
No 222
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.36 E-value=0.057 Score=44.21 Aligned_cols=33 Identities=21% Similarity=0.362 Sum_probs=27.0
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCe-EEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDV-ELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~-el~~i~~ 35 (265)
.++|-|.|+ |.+|+.+++.|.++..+ +++.+..
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r 52 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGR 52 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEc
Confidence 468999999 99999999999987643 7776653
No 223
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.22 E-value=0.059 Score=45.51 Aligned_cols=30 Identities=23% Similarity=0.355 Sum_probs=24.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
+||+|+|+|.+|..++..|.+.. .++..+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 30 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG-HEVQGWL 30 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CeEEEECcCHHHHHHHHHHHhCC-CCEEEEE
Confidence 38999999999999999998764 5666553
No 224
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.21 E-value=0.039 Score=47.60 Aligned_cols=33 Identities=33% Similarity=0.514 Sum_probs=27.7
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++||.|.|+ |.+|+.+++.|.++. .+++++...
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 46 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAG-HDLVLIHRP 46 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEecC
Confidence 359999999 999999999999874 687777643
No 225
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.20 E-value=0.017 Score=50.54 Aligned_cols=35 Identities=29% Similarity=0.350 Sum_probs=26.5
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|+++||+|+|+|.+|..++..|..++..+++ +.|.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~-L~Di 39 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVV-LFDI 39 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEE-EECS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEE-EEeC
Confidence 6678999999999999999988877532644 4444
No 226
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=95.18 E-value=0.025 Score=49.99 Aligned_cols=30 Identities=33% Similarity=0.479 Sum_probs=25.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
.+|||+|+|.||+.+++.|... ++++.+..
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 203 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGF-GLAIHYHN 203 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CEEEEEEeChhHHHHHHHHHHC-CCEEEEEC
Confidence 6899999999999999999877 48876643
No 227
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=95.17 E-value=0.025 Score=49.86 Aligned_cols=30 Identities=27% Similarity=0.371 Sum_probs=25.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
-.+|||+|+|.+|+.+++.+... ++++.+.
T Consensus 171 gktiGIIGlG~IG~~vA~~l~~~-G~~V~~~ 200 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAEAF-GMSVRYW 200 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEE
Confidence 36899999999999999999876 4776544
No 228
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=95.15 E-value=0.027 Score=49.08 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=25.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
|||+|+|+|.+|..++..|..++.+.-+.+.|..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 34 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIK 34 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCc
Confidence 4899999999999999998877644334445543
No 229
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=95.07 E-value=0.053 Score=49.74 Aligned_cols=33 Identities=27% Similarity=0.495 Sum_probs=26.4
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
.+.||+|+|+|.+|..++..|.++. ++++.. ++
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G-~~V~l~-D~ 68 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVG-ISVVAV-ES 68 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTT-CEEEEE-CS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC-CeEEEE-EC
Confidence 3568999999999999999998774 676554 44
No 230
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=95.05 E-value=0.017 Score=50.65 Aligned_cols=31 Identities=23% Similarity=0.283 Sum_probs=26.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
-.+|||+|+|.+|+.+++.|... ++++.+..
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 170 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHF-GMKVLGVS 170 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred cceEEEEEECHHHHHHHHHHHhC-CCEEEEEc
Confidence 36899999999999999999877 47876653
No 231
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=95.03 E-value=0.064 Score=46.07 Aligned_cols=28 Identities=32% Similarity=0.496 Sum_probs=22.7
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCeEEE
Q 024629 3 KVKIGING-FGRIGRLVARVILQRDDVELV 31 (265)
Q Consensus 3 ~~~V~IiG-~G~~G~~l~r~L~~~p~~el~ 31 (265)
+.||+|+| +|.+|..+++.|.+.. .++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G-~~V~ 49 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASG-YPIS 49 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTT-CCEE
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCC-CeEE
Confidence 35899999 8999999999998763 4444
No 232
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.96 E-value=0.065 Score=46.26 Aligned_cols=32 Identities=34% Similarity=0.512 Sum_probs=24.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCC-eEEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDD-VELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~-~el~~i~~~ 36 (265)
+||+|+|+|.+|..++..|....- .+++ +.++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~-l~d~ 34 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYV-FIDA 34 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEcC
Confidence 599999999999999999887642 2444 4444
No 233
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=94.95 E-value=0.04 Score=48.43 Aligned_cols=33 Identities=27% Similarity=0.277 Sum_probs=27.4
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+++|.|.|+ |.+|+.+++.|.++. .++.++...
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 38 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG-HHVRAQVHS 38 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT-CCEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEECC
Confidence 478999999 999999999998764 677776543
No 234
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=94.94 E-value=0.025 Score=52.48 Aligned_cols=32 Identities=13% Similarity=0.244 Sum_probs=26.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
..||||+|+|.+|..+++.|.++. ++|.. .++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G-~~V~v-~dr 41 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHG-FTVCA-YNR 41 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCEEE-ECS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCC-CEEEE-EeC
Confidence 379999999999999999999874 66654 444
No 235
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=94.91 E-value=0.047 Score=50.15 Aligned_cols=90 Identities=14% Similarity=0.193 Sum_probs=56.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeE---EEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVE---LVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~e---l~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~ 79 (265)
+.||.|+|+|-+|+.++++|.+|++++ ++.+ |+......+.. ..+ + .+...
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~va-D~~~~~~~~~~------------------~~g--~-----~~~~~ 66 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTII-AAEGTKVDVAQ------------------QYG--V-----SFKLQ 66 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEE-ESSCCSCCHHH------------------HHT--C-----EEEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEe-ccchhhhhHHh------------------hcC--C-----ceeEE
Confidence 478999999999999999999998774 4433 43211111110 001 0 01111
Q ss_pred e--cCC----CCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 80 G--VRN----PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~--~~d----~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
. ..+ .+.+ . .+.|+|+.+++...+...++.++++|+ ..+
T Consensus 67 ~Vdadnv~~~l~aL-l--~~~DvVIN~s~~~~~l~Im~acleaGv--~Yl 111 (480)
T 2ph5_A 67 QITPQNYLEVIGST-L--EENDFLIDVSIGISSLALIILCNQKGA--LYI 111 (480)
T ss_dssp CCCTTTHHHHTGGG-C--CTTCEEEECCSSSCHHHHHHHHHHHTC--EEE
T ss_pred eccchhHHHHHHHH-h--cCCCEEEECCccccCHHHHHHHHHcCC--CEE
Confidence 1 111 1212 1 234999999999999999999999998 666
No 236
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.90 E-value=0.038 Score=50.20 Aligned_cols=29 Identities=31% Similarity=0.587 Sum_probs=24.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
+||+|+|+|++|..++..|.++. .+++.+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G-~~V~~~ 29 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG-HEVIGV 29 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEE
Confidence 38999999999999999998774 676555
No 237
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=94.87 E-value=0.097 Score=47.94 Aligned_cols=83 Identities=19% Similarity=0.224 Sum_probs=59.8
Q ss_pred ccEEEEEccC----hhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEE
Q 024629 3 KVKIGINGFG----RIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~~~V~IiG~G----~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~ 78 (265)
..+|+|+|++ ..|..+++.|.++..-.+..|+ +. . .. + .| +++
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVn-P~--~------------------~~--------i--~G--~~~ 54 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVN-IK--E------------------EE--------V--QG--VKA 54 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEEC-SS--C------------------SE--------E--TT--EEC
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEEC-CC--C------------------Ce--------E--CC--Eec
Confidence 4689999994 6799999999887534454443 21 1 00 1 12 234
Q ss_pred EecCCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
+ .+.++++ ..+|+++.|+|.....+.++++.++|+|.+++
T Consensus 55 y--~sl~~lp---~~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~ 94 (457)
T 2csu_A 55 Y--KSVKDIP---DEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVI 94 (457)
T ss_dssp B--SSTTSCS---SCCSEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred c--CCHHHcC---CCCCEEEEecCHHHHHHHHHHHHHcCCCEEEE
Confidence 3 3566664 47999999999999999999999999997775
No 238
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=94.87 E-value=0.028 Score=47.27 Aligned_cols=32 Identities=25% Similarity=0.489 Sum_probs=26.7
Q ss_pred EEEEEcc-ChhHHHHHHHHHcC-CCeEEEEEecc
Q 024629 5 KIGINGF-GRIGRLVARVILQR-DDVELVAVNDP 36 (265)
Q Consensus 5 ~V~IiG~-G~~G~~l~r~L~~~-p~~el~~i~~~ 36 (265)
||.|.|+ |.+|+.+++.|.++ ++.+++++...
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 34 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRN 34 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcC
Confidence 5889999 99999999999886 46788777643
No 239
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=94.75 E-value=0.033 Score=46.84 Aligned_cols=32 Identities=25% Similarity=0.561 Sum_probs=27.0
Q ss_pred EEEEEcc-ChhHHHHHHHHHcC-CCeEEEEEecc
Q 024629 5 KIGINGF-GRIGRLVARVILQR-DDVELVAVNDP 36 (265)
Q Consensus 5 ~V~IiG~-G~~G~~l~r~L~~~-p~~el~~i~~~ 36 (265)
+|.|.|+ |.+|+.+++.|.++ |+.++.++...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 35 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRN 35 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcC
Confidence 6999999 99999999999886 56788777643
No 240
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=94.75 E-value=0.025 Score=49.02 Aligned_cols=30 Identities=17% Similarity=0.282 Sum_probs=24.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
+||+|+|+|.+|..+++.|.+.. .++..+.
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g-~~V~~~~ 30 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNG-NEVRIWG 30 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC-CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CeEEEEE
Confidence 38999999999999999988654 4665553
No 241
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=94.74 E-value=0.031 Score=51.61 Aligned_cols=32 Identities=9% Similarity=0.182 Sum_probs=25.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++||+|+|+|.+|..+++.|.++. +++. +.++
T Consensus 2 ~m~IgvIG~G~mG~~lA~~La~~G-~~V~-v~dr 33 (482)
T 2pgd_A 2 QADIALIGLAVMGQNLILNMNDHG-FVVC-AFNR 33 (482)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred CCeEEEEChHHHHHHHHHHHHHCC-CeEE-EEeC
Confidence 368999999999999999998874 5654 4444
No 242
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=94.62 E-value=0.046 Score=50.48 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=25.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+.||+|+|+|.+|..++..|.+.. ++++.. ++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG-~~V~l~-D~ 36 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHG-HQVLLY-DI 36 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC-CeEEEE-EC
Confidence 469999999999999999998764 565544 44
No 243
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=94.61 E-value=0.015 Score=50.73 Aligned_cols=31 Identities=26% Similarity=0.363 Sum_probs=26.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
-.+|||+|+|.+|+.+++.|... ++++.+..
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~-G~~V~~~d 169 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAW-GFPLRCWS 169 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTT-TCCEEEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-CCEEEEEc
Confidence 36899999999999999999877 47777654
No 244
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.61 E-value=0.084 Score=45.54 Aligned_cols=33 Identities=30% Similarity=0.427 Sum_probs=25.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCe-EEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~-el~~i~~~ 36 (265)
++||+|+|+|.+|..++..|.....+ +++ +.++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~-l~d~ 40 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIV-LEDI 40 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEE-EECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEeC
Confidence 46999999999999999998876533 655 4444
No 245
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.58 E-value=0.031 Score=47.90 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=22.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
|+ +||+|+|+|.+|..+...|.+.. .++..+
T Consensus 1 M~-mkI~iiGaGa~G~~~a~~L~~~g-~~V~~~ 31 (294)
T 3g17_A 1 MS-LSVAIIGPGAVGTTIAYELQQSL-PHTTLI 31 (294)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHHC-TTCEEE
T ss_pred CC-cEEEEECCCHHHHHHHHHHHHCC-CeEEEE
Confidence 54 79999999999999999887543 244433
No 246
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=94.54 E-value=0.064 Score=47.03 Aligned_cols=34 Identities=29% Similarity=0.283 Sum_probs=26.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
..||+|+|+|.+|..++..|...+-+.-+.+.|.
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di 54 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDV 54 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 4799999999999999999887764433444454
No 247
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=94.52 E-value=0.018 Score=49.56 Aligned_cols=30 Identities=33% Similarity=0.550 Sum_probs=25.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
.+|||+|+|.+|+.+++.|... ++++.+..
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 152 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAF-GMRVIAYT 152 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEEC
T ss_pred chheeeccCchhHHHHHHHHhh-CcEEEEEe
Confidence 6899999999999999999876 47776653
No 248
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=94.52 E-value=0.027 Score=50.05 Aligned_cols=30 Identities=27% Similarity=0.296 Sum_probs=24.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeE-EEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVE-LVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~e-l~~i 33 (265)
-.+|||+|+|.+|+.+++.|... +++ +.+.
T Consensus 164 g~tvgIIG~G~IG~~vA~~l~~~-G~~~V~~~ 194 (364)
T 2j6i_A 164 GKTIATIGAGRIGYRVLERLVPF-NPKELLYY 194 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG-CCSEEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-CCcEEEEE
Confidence 36899999999999999999876 475 6554
No 249
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=94.51 E-value=0.031 Score=48.66 Aligned_cols=34 Identities=12% Similarity=0.234 Sum_probs=25.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++||+|+|+|.+|..++..|...+.+.-+.+.|.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di 39 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDA 39 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 5799999999999999998876653333444455
No 250
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.50 E-value=0.072 Score=46.11 Aligned_cols=30 Identities=30% Similarity=0.450 Sum_probs=24.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCC-CeEEEEE
Q 024629 4 VKIGINGFGRIGRLVARVILQRD-DVELVAV 33 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p-~~el~~i 33 (265)
+||+|+|+|++|..++..|...+ ..+++.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~ 31 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLL 31 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 38999999999999999988753 4565554
No 251
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=94.48 E-value=0.1 Score=45.62 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=26.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
.+||+|+|+|.+|..++..|...+.+.-+.+.|.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 42 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 5799999999999999999988765533444554
No 252
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.47 E-value=0.082 Score=42.92 Aligned_cols=24 Identities=21% Similarity=0.320 Sum_probs=20.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRD 26 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p 26 (265)
++||+|+|+|.+|..+++.|.+..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g 42 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAG 42 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC
Confidence 479999999999999999988653
No 253
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.45 E-value=0.085 Score=45.53 Aligned_cols=33 Identities=24% Similarity=0.423 Sum_probs=24.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+||+|+|+|.+|..++..|.....+.-+.+.|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~ 33 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDR 33 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 489999999999999999887753322344454
No 254
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.40 E-value=0.036 Score=45.17 Aligned_cols=31 Identities=29% Similarity=0.354 Sum_probs=25.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
|||.|+|+|.+|+.+++.|.+. +.+++.+..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~-g~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR-KYGVVIINK 31 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEEC
Confidence 3799999999999999999876 367776653
No 255
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.30 E-value=0.065 Score=48.96 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=27.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
.+|++|+|+||+|.-++..|.+. +.++++..-.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D~~ 40 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVDKD 40 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 47999999999999999999887 4777776543
No 256
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.24 E-value=0.43 Score=39.30 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=51.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe-c
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG-V 81 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~-~ 81 (265)
..+|-|+|+|.+|...++.|.+.. .+++.+. +..... +..+. +.+ .+ .... .
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~G-A~VtVva-p~~~~~-l~~l~----------------~~~-~i-------~~i~~~ 83 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEG-AAITVVA-PTVSAE-INEWE----------------AKG-QL-------RVKRKK 83 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGC-CCEEEEC-SSCCHH-HHHHH----------------HTT-SC-------EEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEC-CCCCHH-HHHHH----------------HcC-Cc-------EEEECC
Confidence 468999999999999999999873 5555443 322221 11111 001 01 1111 1
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEEcCCCCC
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD 129 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vviS~~~~~ 129 (265)
.+++++ .++|+||-||+....-..+....+.|+ .|-..|+++
T Consensus 84 ~~~~dL----~~adLVIaAT~d~~~N~~I~~~ak~gi--~VNvvD~p~ 125 (223)
T 3dfz_A 84 VGEEDL----LNVFFIVVATNDQAVNKFVKQHIKNDQ--LVNMASSFS 125 (223)
T ss_dssp CCGGGS----SSCSEEEECCCCTHHHHHHHHHSCTTC--EEEC-----
T ss_pred CCHhHh----CCCCEEEECCCCHHHHHHHHHHHhCCC--EEEEeCCcc
Confidence 122333 579999999987665555555555665 333445443
No 257
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.21 E-value=0.066 Score=46.13 Aligned_cols=33 Identities=36% Similarity=0.484 Sum_probs=25.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|||+|+|+|.+|..++..|..++.+.-+.+.|.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~ 33 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 489999999999999998887764433344454
No 258
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=94.19 E-value=0.33 Score=44.83 Aligned_cols=33 Identities=18% Similarity=0.369 Sum_probs=28.1
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++||.|.|+ |++|+.+++.|.++. .+|+++...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G-~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG-HEVIQLVRK 180 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 579999999 999999999999885 687777644
No 259
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=94.17 E-value=0.014 Score=51.43 Aligned_cols=30 Identities=20% Similarity=0.272 Sum_probs=24.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
..||+|+|+|.+|..+++.|.+.. .++.+.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G-~~V~~~ 37 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAAN-HSVFGY 37 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCEEEEEeecHHHHHHHHHHHHCC-CEEEEE
Confidence 479999999999999999998774 565544
No 260
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=94.13 E-value=0.12 Score=45.53 Aligned_cols=33 Identities=27% Similarity=0.339 Sum_probs=27.7
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|++|.|.|+ |.+|+.+++.|.++. .+++++...
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG-HYVIASDWK 62 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC-CeEEEEECC
Confidence 579999999 999999999998874 677776543
No 261
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=94.13 E-value=0.07 Score=46.82 Aligned_cols=30 Identities=33% Similarity=0.434 Sum_probs=24.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
..+|||+|+|.+|+.+++.|... ++++.+.
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~-G~~V~~~ 193 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAF-DCPISYF 193 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTT-TCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEE
Confidence 35899999999999999999876 3665543
No 262
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=94.12 E-value=0.11 Score=45.49 Aligned_cols=33 Identities=21% Similarity=0.406 Sum_probs=26.9
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCe-EEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDV-ELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~-el~~i~~ 35 (265)
.++|-|.|+ |.+|+.+++.|.++++. +|+.+..
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r 55 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR 55 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 479999999 99999999999887334 7776653
No 263
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=94.10 E-value=0.038 Score=48.34 Aligned_cols=31 Identities=32% Similarity=0.529 Sum_probs=25.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
..+|||+|+|.+|+.+++.|... ++++.+..
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d 185 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPF-GVQRFLYT 185 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG-TCCEEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEEEEC
Confidence 36899999999999999999876 36766554
No 264
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.09 E-value=0.12 Score=40.63 Aligned_cols=31 Identities=23% Similarity=0.257 Sum_probs=25.0
Q ss_pred cEEEEEccChhHHHHHHHHHcC-CCeEEEEEec
Q 024629 4 VKIGINGFGRIGRLVARVILQR-DDVELVAVND 35 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~-p~~el~~i~~ 35 (265)
.+|.|+|+|.+|..+++.|.++ . .+++.+..
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g-~~V~vid~ 71 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYG-KISLGIEI 71 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHC-SCEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhccC-CeEEEEEC
Confidence 5899999999999999999865 4 56666543
No 265
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=93.12 E-value=0.0092 Score=48.52 Aligned_cols=29 Identities=24% Similarity=0.288 Sum_probs=23.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVA 32 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~ 32 (265)
.+||+|+|+|.+|..+++.|.+.. .++..
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G-~~V~~ 47 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCG-YSVVF 47 (201)
Confidence 478999999999999999988663 45443
No 266
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=93.94 E-value=0.035 Score=49.00 Aligned_cols=29 Identities=28% Similarity=0.386 Sum_probs=24.6
Q ss_pred cEEEEEccChhHHHHHHHHH-cCCCeEEEEE
Q 024629 4 VKIGINGFGRIGRLVARVIL-QRDDVELVAV 33 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~-~~p~~el~~i 33 (265)
.+|||+|+|.+|+.+++.+. .. ++++.+.
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~-G~~V~~~ 193 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGL-GMKLVYY 193 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CEEEEEEECHHHHHHHHHHHHhc-CCEEEEE
Confidence 68999999999999999998 66 4776654
No 267
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=93.81 E-value=0.091 Score=46.05 Aligned_cols=35 Identities=31% Similarity=0.385 Sum_probs=26.5
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
..+||+|+|+|.+|..++..|...+...-+.+.|.
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di 52 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDV 52 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeC
Confidence 35799999999999999988887764433444554
No 268
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=93.76 E-value=0.32 Score=41.59 Aligned_cols=32 Identities=13% Similarity=0.197 Sum_probs=27.1
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
.++|-|.|+ |.+|+.+++.|.++. .+++++..
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 43 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHG-YKVRGTAR 43 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 478999999 999999999999874 67776654
No 269
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=93.67 E-value=0.051 Score=48.82 Aligned_cols=31 Identities=32% Similarity=0.420 Sum_probs=25.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
-.+|||+|+|.||+.+++.|... ++++.+..
T Consensus 191 gktvGIIGlG~IG~~vA~~l~a~-G~~V~~~d 221 (393)
T 2nac_A 191 AMHVGTVAAGRIGLAVLRRLAPF-DVHLHYTD 221 (393)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG-TCEEEEEC
T ss_pred CCEEEEEeECHHHHHHHHHHHhC-CCEEEEEc
Confidence 36899999999999999999876 47876553
No 270
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.61 E-value=0.064 Score=41.01 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=28.5
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
|...+|.|+|+|++|+.+++.|.+.. .+++.+..
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~g-~~V~vid~ 34 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQRG-QNVTVISN 34 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC-CCEEEEEC
Confidence 77789999999999999999998763 67776654
No 271
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=93.46 E-value=0.2 Score=43.97 Aligned_cols=93 Identities=16% Similarity=0.272 Sum_probs=61.0
Q ss_pred ccEEEEEcc-ChhHHHHHHH--HHcCCCeEEEEEeccCCCh--hhhhhheeeecccCcccccceeeeCCceEEECCE--E
Q 024629 3 KVKIGINGF-GRIGRLVARV--ILQRDDVELVAVNDPFITT--DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK--P 75 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~--L~~~p~~el~~i~~~~~~~--~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~--~ 75 (265)
..||-|.|+ |+.++.+++. +.++++.++++..++.... +. +.++.. .
T Consensus 10 ~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~~~g~~~~--------------------------v~~G~~~~G 63 (334)
T 3mwd_B 10 HTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQK--------------------------FYWGHKEIL 63 (334)
T ss_dssp TCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEE--------------------------EEETTEEEE
T ss_pred CCeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCCCCCccce--------------------------EeccCccCC
Confidence 479999999 9998888877 5677889999999885332 11 101111 2
Q ss_pred EEEEecCCCCCCCccccCccEEEEecCCcccHHHHHHHHh-CCCcEEEE
Q 024629 76 VTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLK-GGAKKVII 123 (265)
Q Consensus 76 i~~~~~~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~-~g~~~vvi 123 (265)
++++ .+.+++.-...++|+++.++|.....+.+.+.+. +|++.+|+
T Consensus 64 vpvy--~sv~ea~~~~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vVi 110 (334)
T 3mwd_B 64 IPVF--KNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAI 110 (334)
T ss_dssp EEEE--SSHHHHHHHCTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEE
T ss_pred ceee--CCHHHHhhcCCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEE
Confidence 4555 3444431000158999999998776665555555 89988877
No 272
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.38 E-value=0.11 Score=43.95 Aligned_cols=31 Identities=16% Similarity=0.205 Sum_probs=25.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
.||+|+|+|.+|+.+++.|.+.. +++ .+.++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g-~~V-~v~~r 160 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEG-AKV-FLWNR 160 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT-CEE-EEECS
T ss_pred CEEEEECchHHHHHHHHHHHHcC-CEE-EEEEC
Confidence 68999999999999999998775 455 45555
No 273
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=93.27 E-value=0.081 Score=47.84 Aligned_cols=29 Identities=24% Similarity=0.409 Sum_probs=24.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
.+|||+|+|.||+.+++.+... ++++.+.
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~y 185 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESL-GMTVRYY 185 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEE
Confidence 5899999999999999999877 4776654
No 274
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=93.15 E-value=0.1 Score=45.41 Aligned_cols=33 Identities=21% Similarity=0.351 Sum_probs=24.2
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcC-CCeEEEEEecc
Q 024629 4 VKIGINGF-GRIGRLVARVILQR-DDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~-p~~el~~i~~~ 36 (265)
+||+|+|+ |.+|..++.+|..+ +...-+.+.|.
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di 35 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDI 35 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEec
Confidence 48999996 99999999999875 54333334444
No 275
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.14 E-value=0.11 Score=45.16 Aligned_cols=36 Identities=36% Similarity=0.478 Sum_probs=28.9
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 1 m~-~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
|+ ++||+|+|+|++|..++..|.....++ +.+.|..
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g~~~-v~L~Di~ 37 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKNLGD-VVLFDIV 37 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeCC
Confidence 54 579999999999999999998876557 6677764
No 276
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.13 E-value=0.068 Score=49.27 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=27.4
Q ss_pred CccEEEEEccChhHHHHHHHHHcC-CCeEEEEEe
Q 024629 2 GKVKIGINGFGRIGRLVARVILQR-DDVELVAVN 34 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~-p~~el~~i~ 34 (265)
+++||+|+|+|++|..++..|.++ ++.+++.+.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D 41 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVD 41 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEE
Confidence 457999999999999999999876 467877764
No 277
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.08 E-value=0.11 Score=44.89 Aligned_cols=35 Identities=26% Similarity=0.317 Sum_probs=28.5
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
|+ +||+|+|+|++|..++..|...+.++ +.+.|..
T Consensus 1 M~-~kI~VIGaG~vG~~~a~~la~~g~~~-v~L~Di~ 35 (309)
T 1ur5_A 1 MR-KKISIIGAGFVGSTTAHWLAAKELGD-IVLLDIV 35 (309)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHHHTTCSE-EEEECSS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHCCCCe-EEEEeCC
Confidence 54 79999999999999999998877567 6677764
No 278
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.91 E-value=0.13 Score=37.94 Aligned_cols=31 Identities=26% Similarity=0.530 Sum_probs=25.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
.++|.|+|+|++|+.+++.|.+.. .+++.+.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g-~~v~~~d 34 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKG-HDIVLID 34 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 468999999999999999998774 6766554
No 279
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.79 E-value=0.082 Score=48.48 Aligned_cols=33 Identities=27% Similarity=0.293 Sum_probs=27.2
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHcC-CCeEEEEE
Q 024629 1 MG-KVKIGINGFGRIGRLVARVILQR-DDVELVAV 33 (265)
Q Consensus 1 m~-~~~V~IiG~G~~G~~l~r~L~~~-p~~el~~i 33 (265)
|+ |+||+|+|+|++|..++..|.++ ++.+++.+
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~ 36 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVV 36 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEE
Confidence 54 57999999999999999999876 35777665
No 280
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=92.72 E-value=0.026 Score=49.19 Aligned_cols=37 Identities=24% Similarity=0.366 Sum_probs=29.6
Q ss_pred cEEEEEccChhHHHHHHHHHc-CCCeEEEEEeccCCChhh
Q 024629 4 VKIGINGFGRIGRLVARVILQ-RDDVELVAVNDPFITTDY 42 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~-~p~~el~~i~~~~~~~~~ 42 (265)
.+++|+|+|.+|+.+++.|.. +| ++-+.+.++. ..+.
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~-~~~V~v~~r~-~a~~ 159 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFA-LEAILVHDPY-ASPE 159 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSC-CCEEEEECTT-CCHH
T ss_pred cEEEEECccHHHHHHHHHHHHhCC-CcEEEEECCc-HHHH
Confidence 589999999999999999886 45 7777777776 4433
No 281
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=92.59 E-value=0.6 Score=39.43 Aligned_cols=31 Identities=26% Similarity=0.448 Sum_probs=26.1
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
+||-|.|+ |++|+.+++.|.++. .+++++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG-YEVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 37999999 999999999999874 67776643
No 282
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=92.51 E-value=0.17 Score=41.29 Aligned_cols=35 Identities=14% Similarity=0.228 Sum_probs=29.8
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCC-CeEEEEEec
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRD-DVELVAVND 35 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p-~~el~~i~~ 35 (265)
|++++|-|.|+ |.+|+.+++.|.+++ +.+++.+..
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 45689999999 999999999999885 688887754
No 283
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=92.49 E-value=0.14 Score=45.43 Aligned_cols=111 Identities=18% Similarity=0.166 Sum_probs=61.0
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCC-eEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDD-VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~-~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~ 80 (265)
|.||.|+|+ |-||...++.+.+||+ |++++++....+.+.++.+.+ .-.|++. ...+.... ....+.+..
T Consensus 21 mk~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~~--~f~p~~v----~v~d~~~~--~~~~~~v~~ 92 (398)
T 2y1e_A 21 RLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRA--QTGVTNI----AVADEHAA--QRVGDIPYH 92 (398)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHHHH--HHCCCCE----EESCHHHH--HHHCCCSEE
T ss_pred ceEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHHHH--HcCCCEE----EEcCHHHh--hhcCCEEEe
Confidence 468999999 9999999999999986 999999982235544332211 1112221 00000000 000011211
Q ss_pred cCC-CCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 81 VRN-PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~d-~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
..+ ..++. ...++|+|+.+.-......-.-.++++|. .+-+
T Consensus 93 G~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK-~iaL 134 (398)
T 2y1e_A 93 GSDAATRLV-EQTEADVVLNALVGALGLRPTLAALKTGA-RLAL 134 (398)
T ss_dssp STTHHHHHH-HHSCCSEEEECCCSGGGHHHHHHHHHHTC-EEEE
T ss_pred cHHHHHHHh-cCCCCCEEEEeCcCHHHHHHHHHHHHCCC-ceEE
Confidence 111 11110 01358999999887766666666778884 3444
No 284
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.45 E-value=0.71 Score=39.10 Aligned_cols=30 Identities=17% Similarity=0.214 Sum_probs=24.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
.|+.|+|+|-+|+.++..|.+.. .++..++
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G-~~v~V~n 148 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG-LQVSVLN 148 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 48999999999999999999886 6665444
No 285
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.42 E-value=0.14 Score=43.48 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=27.4
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~-~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|| +.||+|+|+|.+|..+++.+..+. ++++.. ++
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~G-~~V~l~-d~ 35 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFHG-FAVTAY-DI 35 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCC-CeEEEE-eC
Confidence 54 579999999999999999998874 676554 44
No 286
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=92.37 E-value=0.17 Score=45.10 Aligned_cols=112 Identities=15% Similarity=0.172 Sum_probs=62.5
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCC-eEEEEEeccCCChhhhhhheeeecccCcccccceeeeCC---ceEE--E--CC
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDD-VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDD---KTLL--F--GE 73 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~-~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~---~~l~--~--~g 73 (265)
|.+|.|+|+ |-||...++.+.+||+ |++++++..+ +.+.++.+.+ .-.|++. ...+. ..|. + .+
T Consensus 9 ~k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~ag~-nv~~L~~q~~--~f~p~~v----~v~d~~~~~~L~~~l~~~~ 81 (406)
T 1q0q_A 9 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK-NVTRMVEQCL--EFSPRYA----VMDDEASAKLLKTMLQQQG 81 (406)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS-CHHHHHHHHH--HHCCSEE----EESSHHHHHHHHHHHHHTT
T ss_pred ceeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEcCC-CHHHHHHHHH--HhCCCEE----EEcCHHHHHHHHHHhhcCC
Confidence 579999999 9999999999999986 9999998854 4444332211 0012211 00000 0000 0 01
Q ss_pred EEEEEEecC-CCCCCCccccCccEEEEecCCcccHHHHHHHHhCCCcEEEE
Q 024629 74 KPVTVFGVR-NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 74 ~~i~~~~~~-d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~~~vvi 123 (265)
..+.++... ...++. ...++|+|+.+.-......-.-.++++|. .+-+
T Consensus 82 ~~~~v~~G~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK-~iaL 130 (406)
T 1q0q_A 82 SRTEVLSGQQAACDMA-ALEDVDQVMAAIVGAAGLLPTLAAIRAGK-TILL 130 (406)
T ss_dssp CCCEEEESHHHHHHHH-TCTTCCEEEECCSSGGGHHHHHHHHHTTC-EEEE
T ss_pred CCcEEEeCHHHHHHHh-cCCCCCEEEEccccHhHHHHHHHHHHCCC-eEEE
Confidence 112232211 111110 01458999998887766666667788884 3444
No 287
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=92.24 E-value=0.084 Score=46.63 Aligned_cols=35 Identities=17% Similarity=0.158 Sum_probs=27.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
..+|+|+|+|.+|+.+++.|.....++-+.+.++.
T Consensus 129 ~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~ 163 (350)
T 1x7d_A 129 ARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTD 163 (350)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 36899999999999999887654346777777774
No 288
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.15 E-value=0.12 Score=44.98 Aligned_cols=35 Identities=20% Similarity=0.230 Sum_probs=26.8
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+++||+|+|+|.+|..++..|..++.+.-+.+.|.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di 39 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDL 39 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 45799999999999999998887654444455554
No 289
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=91.74 E-value=0.17 Score=45.92 Aligned_cols=41 Identities=17% Similarity=0.272 Sum_probs=33.2
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHc---CCC-eEEEEEeccCCChhhh
Q 024629 2 GKVKIGINGF-GRIGRLVARVILQ---RDD-VELVAVNDPFITTDYM 43 (265)
Q Consensus 2 ~~~~V~IiG~-G~~G~~l~r~L~~---~p~-~el~~i~~~~~~~~~~ 43 (265)
.|.||.|+|+ |-||...++.+.+ ||+ |++++++..+ +.+.+
T Consensus 76 ~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg~-Nv~lL 121 (488)
T 3au8_A 76 KPINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNK-SVNEL 121 (488)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEESS-CHHHH
T ss_pred cceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcCC-CHHHH
Confidence 4678999999 9999999999998 554 9999998854 44443
No 290
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=91.70 E-value=0.13 Score=46.18 Aligned_cols=23 Identities=26% Similarity=0.501 Sum_probs=20.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcC
Q 024629 3 KVKIGINGFGRIGRLVARVILQR 25 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~ 25 (265)
+.||+|+|+|..|..|+..|.++
T Consensus 34 p~KI~ViGaGsWGTALA~~la~n 56 (391)
T 4fgw_A 34 PFKVTVIGSGNWGTTIAKVVAEN 56 (391)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHc
Confidence 47999999999999999999753
No 291
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=91.59 E-value=0.15 Score=43.71 Aligned_cols=35 Identities=31% Similarity=0.513 Sum_probs=27.8
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCC-CeEEEEEec
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRD-DVELVAVND 35 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p-~~el~~i~~ 35 (265)
|+.+||-|.|+ |.+|+.+++.|.++. +.+++++..
T Consensus 1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 76679999999 999999999998764 578877753
No 292
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=91.57 E-value=0.072 Score=49.12 Aligned_cols=30 Identities=23% Similarity=0.377 Sum_probs=24.4
Q ss_pred cEEEEEccChhHHHHHHHHHcC-----CCeEEEEE
Q 024629 4 VKIGINGFGRIGRLVARVILQR-----DDVELVAV 33 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~-----p~~el~~i 33 (265)
.||||||+|.+|..+++.|.+. ++++++.-
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg 89 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIG 89 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEE
Confidence 6899999999999999999875 34666533
No 293
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.41 E-value=0.24 Score=43.14 Aligned_cols=34 Identities=35% Similarity=0.424 Sum_probs=27.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
++||+|+|+|.+|..++..|.....++ +.+.|..
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~-V~L~Di~ 47 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGD-VYMFDII 47 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEECC
Confidence 469999999999999999988776447 6666664
No 294
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=91.20 E-value=0.18 Score=43.55 Aligned_cols=35 Identities=23% Similarity=0.323 Sum_probs=27.8
Q ss_pred CC-ccEEEEEcc-ChhHHHHHHHHHcC-CCeEEEEEec
Q 024629 1 MG-KVKIGINGF-GRIGRLVARVILQR-DDVELVAVND 35 (265)
Q Consensus 1 m~-~~~V~IiG~-G~~G~~l~r~L~~~-p~~el~~i~~ 35 (265)
|+ |++|-|.|+ |.+|+.+++.|.++ ++.+++++..
T Consensus 1 Ms~m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r 38 (348)
T 1oc2_A 1 MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK 38 (348)
T ss_dssp --CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CCcCcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 65 679999999 99999999998876 3578877754
No 295
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=91.14 E-value=0.17 Score=42.64 Aligned_cols=27 Identities=19% Similarity=0.443 Sum_probs=24.2
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCC
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDD 27 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~ 27 (265)
|+++||-|.|+ |++|+.+++.|.++..
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~ 31 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG 31 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC
Confidence 66789999999 9999999999998753
No 296
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.11 E-value=0.73 Score=39.92 Aligned_cols=86 Identities=17% Similarity=0.110 Sum_probs=50.0
Q ss_pred ccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~-l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
+.||.++|.|-+|.. ++++|.++. .++.+ .|..........| . +.| +.++..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G-~~V~~-~D~~~~~~~~~~L----------~------~~g---------i~v~~g 56 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAG-FEVSG-CDAKMYPPMSTQL----------E------ALG---------IDVYEG 56 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTT-CEEEE-EESSCCTTHHHHH----------H------HTT---------CEEEES
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCC-CEEEE-EcCCCCcHHHHHH----------H------hCC---------CEEECC
Confidence 468999999999996 888887774 66544 3432211111000 0 112 223333
Q ss_pred CCCCCCCccc-cCccEEEEecCCcccHHHHHHHHhCCC
Q 024629 82 RNPEEIPWAE-TGAEYVVESTGVFTDKDKAAAHLKGGA 118 (265)
Q Consensus 82 ~d~~~~~~~~-~~~DvV~~atp~~~~~~~~~~~~~~g~ 118 (265)
.+++++ . .++|+||-+.+-......+.++.++|+
T Consensus 57 ~~~~~l---~~~~~d~vV~Spgi~~~~p~~~~a~~~gi 91 (326)
T 3eag_A 57 FDAAQL---DEFKADVYVIGNVAKRGMDVVEAILNLGL 91 (326)
T ss_dssp CCGGGG---GSCCCSEEEECTTCCTTCHHHHHHHHTTC
T ss_pred CCHHHc---CCCCCCEEEECCCcCCCCHHHHHHHHcCC
Confidence 344444 2 368999987665444555667788887
No 297
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.74 E-value=0.23 Score=37.34 Aligned_cols=33 Identities=27% Similarity=0.547 Sum_probs=27.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+.+|.|+|+|++|+.+++.|.++. .+++.+...
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g-~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASD-IPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT-CCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC-CCEEEEECC
Confidence 368999999999999999998764 677777543
No 298
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=90.72 E-value=0.26 Score=42.56 Aligned_cols=36 Identities=28% Similarity=0.341 Sum_probs=27.8
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 1 m~-~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
|. ++||+|+|+|.+|..++..|......+ +.+.|+.
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~-V~l~D~~ 37 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLAD-VVLFDIA 37 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCE-EEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCce-EEEEeCC
Confidence 64 479999999999999999998765337 5555554
No 299
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=90.72 E-value=0.2 Score=40.22 Aligned_cols=31 Identities=26% Similarity=0.271 Sum_probs=25.4
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
|+ ..|+|||+|..|..++..|.++. ++++-+
T Consensus 1 Mt-~dV~IIGaGpaGL~aA~~La~~G-~~V~v~ 31 (336)
T 3kkj_A 1 MT-VPIAIIGTGIAGLSAAQALTAAG-HQVHLF 31 (336)
T ss_dssp -C-CCEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CC-CCEEEECcCHHHHHHHHHHHHCC-CCEEEE
Confidence 54 88999999999999999999874 665554
No 300
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=90.67 E-value=0.17 Score=46.60 Aligned_cols=34 Identities=12% Similarity=0.209 Sum_probs=27.3
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|.|+||||+|+|.+|..+++.|.++. ++|... ++
T Consensus 2 ~~~~kIgiIGlG~MG~~lA~~L~~~G-~~V~v~-dr 35 (484)
T 4gwg_A 2 NAQADIALIGLAVMGQNLILNMNDHG-FVVCAF-NR 35 (484)
T ss_dssp -CCBSEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS
T ss_pred CCCCEEEEEChhHHHHHHHHHHHHCC-CEEEEE-eC
Confidence 55789999999999999999999874 666544 44
No 301
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=90.55 E-value=1.3 Score=40.57 Aligned_cols=104 Identities=16% Similarity=0.256 Sum_probs=61.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCC--------Chhhhhhheeeeccc-CcccccceeeeCCceEEECC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI--------TTDYMTYMFKYDSVH-GQWKHHELKVKDDKTLLFGE 73 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~--------~~~~~a~l~~~~~~~-~~~~~~~v~~~~~~~l~~~g 73 (265)
-.||+|-|+|.+|..+++.|.+. +.++++|.|... +.+.+..++.+-... +... .. ... + .+
T Consensus 252 g~~vaVqG~GnVG~~~a~~L~~~-GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~-~~---~~~--~--~~ 322 (470)
T 2bma_A 252 KQTAVVSGSGNVALYCVQKLLHL-NVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIK-EY---LNH--S--ST 322 (470)
T ss_dssp GCEEEEECSSHHHHHHHHHHHHT-TCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGG-GG---GGT--C--SS
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHH-HH---Hhh--c--CC
Confidence 36899999999999999999887 589999998631 111222222111110 1111 00 000 0 01
Q ss_pred EEEEEEecCCCCCCCccccCccEEEEecC-CcccHHHHHHHHhCCCcEEEE
Q 024629 74 KPVTVFGVRNPEEIPWAETGAEYVVESTG-VFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 74 ~~i~~~~~~d~~~~~~~~~~~DvV~~atp-~~~~~~~~~~~~~~g~~~vvi 123 (265)
...+ +.+++ |. .+||+.+-|.- ...+.+.++.+.+.++| +|+
T Consensus 323 --a~~v---~~~~~-~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 365 (470)
T 2bma_A 323 --AKYF---PNEKP-WG-VPCTLAFPCATQNDVDLDQAKLLQKNGCI-LVG 365 (470)
T ss_dssp --CEEC---SSCCT-TS-SCCSEEEECSSTTCBCSHHHHHHHHTTCC-EEE
T ss_pred --cEEe---cCcCe-ee-cCccEEEeccccCcCCHHHHHHHHhcCcE-EEE
Confidence 1122 22455 74 68999998764 45678888888888886 444
No 302
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=90.53 E-value=0.2 Score=42.62 Aligned_cols=32 Identities=28% Similarity=0.416 Sum_probs=26.2
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEE
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i 33 (265)
|+++||.|.|+ |.+|+.+++.|.++. .+++.+
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~~~g-~~v~~~ 33 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLEQRG-DVELVL 33 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCT-TEEEEC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEE
Confidence 77789999999 999999999999874 565554
No 303
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=90.51 E-value=0.21 Score=46.09 Aligned_cols=29 Identities=21% Similarity=0.389 Sum_probs=24.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
.+|+|+|+|.+|+.+++.+.... ++++++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G-a~Viv~ 303 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG-ARVSVT 303 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEE
Confidence 68999999999999999998774 676544
No 304
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=90.24 E-value=0.25 Score=42.63 Aligned_cols=34 Identities=21% Similarity=0.337 Sum_probs=28.7
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcC-CCeEEEEEecc
Q 024629 3 KVKIGINGF-GRIGRLVARVILQR-DDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~-p~~el~~i~~~ 36 (265)
++||-|.|+ |++|+.+++.|.++ +.++++++...
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~ 59 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDAL 59 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecc
Confidence 689999999 99999999999876 45888877643
No 305
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=90.21 E-value=0.26 Score=42.59 Aligned_cols=31 Identities=23% Similarity=0.327 Sum_probs=22.7
Q ss_pred EEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 5 ~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
||+|+|+|.+|..++..|...+ +.-+.+.|.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~-l~el~L~Di 31 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRG-YDDLLLIAR 31 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHT-CSCEEEECS
T ss_pred CEEEECcCHHHHHHHHHHHhCC-CCEEEEEcC
Confidence 7999999999999998887654 322334454
No 306
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=90.08 E-value=0.31 Score=41.18 Aligned_cols=31 Identities=23% Similarity=0.397 Sum_probs=26.7
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
|||-|.|+ |++|+.|++.|.++. .+|++++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G-~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG-HEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 48999999 999999999999874 68887764
No 307
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=90.07 E-value=0.29 Score=38.94 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=26.7
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCe-EEEEEe
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDV-ELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~-el~~i~ 34 (265)
++||.|.|+ |.+|+.+++.|.+++.+ ++.++.
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~ 38 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPA 38 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCB
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEe
Confidence 468999999 99999999999988753 666554
No 308
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=89.99 E-value=0.25 Score=44.33 Aligned_cols=30 Identities=27% Similarity=0.541 Sum_probs=24.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCe-EEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~-el~~i~ 34 (265)
.+|+|+|+|.+|+.+++.|.... + +++.++
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G-~~~V~v~~ 198 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRG-VRAVLVAN 198 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC-CSEEEEEC
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CCEEEEEe
Confidence 58999999999999999998764 6 555443
No 309
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=89.80 E-value=0.36 Score=41.25 Aligned_cols=32 Identities=25% Similarity=0.286 Sum_probs=25.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+.||+|+|+|.+|..++..|.++ +.+++.+ ++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~-G~~V~~~-d~ 46 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT-GHTVVLV-DQ 46 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCeEEEE-EC
Confidence 56899999999999999999877 4676544 44
No 310
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=89.66 E-value=0.31 Score=41.26 Aligned_cols=33 Identities=33% Similarity=0.443 Sum_probs=27.9
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++||.|.|+ |++|+.+++.|.++. .+++++...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASG-EEVTVLDDL 40 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CCEEEECCC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CEEEEEecC
Confidence 689999999 999999999999884 677776543
No 311
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=89.61 E-value=0.12 Score=42.90 Aligned_cols=32 Identities=13% Similarity=0.123 Sum_probs=26.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
++||+|+|+|.+|..+.+.|.+.. .+++++..
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G-~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVG-HYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTT-CEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCC-CEEEEecC
Confidence 579999999999999999998874 67666543
No 312
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=89.54 E-value=1.2 Score=40.30 Aligned_cols=86 Identities=15% Similarity=0.181 Sum_probs=50.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCC-hhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecC
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~-~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~ 82 (265)
.||.|+|.|.+|..+++.|.++. .++.+. |.... ....... + .+.| +.+....
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G-~~V~~~-D~~~~~~~~~~~~---------L------~~~g---------i~~~~g~ 63 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLG-AIVTVN-DGKPFDENPTAQS---------L------LEEG---------IKVVCGS 63 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTT-CEEEEE-ESSCGGGCHHHHH---------H------HHTT---------CEEEESC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEEE-eCCcccCChHHHH---------H------HhCC---------CEEEECC
Confidence 68999999999999999998874 665544 33211 0000000 0 0112 2233323
Q ss_pred CCCCCCccccC-ccEEEEecCCcccHHHHHHHHhCCC
Q 024629 83 NPEEIPWAETG-AEYVVESTGVFTDKDKAAAHLKGGA 118 (265)
Q Consensus 83 d~~~~~~~~~~-~DvV~~atp~~~~~~~~~~~~~~g~ 118 (265)
+++++ ..+ +|+||-+.+-......+..+.+.|+
T Consensus 64 ~~~~~---~~~~~d~vv~spgi~~~~p~~~~a~~~gi 97 (451)
T 3lk7_A 64 HPLEL---LDEDFCYMIKNPGIPYNNPMVKKALEKQI 97 (451)
T ss_dssp CCGGG---GGSCEEEEEECTTSCTTSHHHHHHHHTTC
T ss_pred ChHHh---hcCCCCEEEECCcCCCCChhHHHHHHCCC
Confidence 34433 134 8999987765544455667778887
No 313
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=89.29 E-value=0.36 Score=42.28 Aligned_cols=30 Identities=30% Similarity=0.475 Sum_probs=25.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
.+|||+|+|.||+.+++.|... ++++.+..
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~-G~~V~~~d 171 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAF-GMKVLCYD 171 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred ceEEEECcCHHHHHHHHHHHHC-cCEEEEEC
Confidence 6899999999999999999977 47876654
No 314
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=89.23 E-value=0.49 Score=41.17 Aligned_cols=81 Identities=12% Similarity=0.271 Sum_probs=48.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecCC
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~d 83 (265)
-+|.|+|+|.+|...+.++.... .+++++.......+.. . +.|.. .++ .+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~---~----------------~lGa~--------~v~--~~ 227 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMG-AEVSVFARNEHKKQDA---L----------------SMGVK--------HFY--TD 227 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEEECSSSTTHHHH---H----------------HTTCS--------EEE--SS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHH---H----------------hcCCC--------eec--CC
Confidence 47999999999999998887764 6877765443222211 1 11200 122 23
Q ss_pred CCCCCccccCccEEEEecCCcccHHHHHHHHhCC
Q 024629 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGG 117 (265)
Q Consensus 84 ~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g 117 (265)
.+.+ ..++|+||+|++.....+.+-.+++.|
T Consensus 228 ~~~~---~~~~D~vid~~g~~~~~~~~~~~l~~~ 258 (348)
T 3two_A 228 PKQC---KEELDFIISTIPTHYDLKDYLKLLTYN 258 (348)
T ss_dssp GGGC---CSCEEEEEECCCSCCCHHHHHTTEEEE
T ss_pred HHHH---hcCCCEEEECCCcHHHHHHHHHHHhcC
Confidence 3333 238999999999874555544455443
No 315
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=88.99 E-value=0.34 Score=42.03 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=25.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++||+|+|+|++|..++-.|..++.+.-+.+.|.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di 40 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDV 40 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 4799999999999999999988753333344454
No 316
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=88.97 E-value=0.36 Score=41.81 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=26.6
Q ss_pred CC-ccEEEEEcc-ChhHHHHHHHHHcCCCe------EEEEE
Q 024629 1 MG-KVKIGINGF-GRIGRLVARVILQRDDV------ELVAV 33 (265)
Q Consensus 1 m~-~~~V~IiG~-G~~G~~l~r~L~~~p~~------el~~i 33 (265)
|+ ++||.|.|+ |.+|..+++.|.....+ +++.+
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~ 41 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLL 41 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEE
Confidence 54 479999999 99999999999887543 66665
No 317
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=88.88 E-value=0.38 Score=41.44 Aligned_cols=30 Identities=20% Similarity=0.433 Sum_probs=25.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
..+|||+|+|.+|+.+++.|... ++++.+.
T Consensus 124 g~~vgIIG~G~IG~~~A~~l~~~-G~~V~~~ 153 (303)
T 1qp8_A 124 GEKVAVLGLGEIGTRVGKILAAL-GAQVRGF 153 (303)
T ss_dssp TCEEEEESCSTHHHHHHHHHHHT-TCEEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHHHC-CCEEEEE
Confidence 36899999999999999999876 4776554
No 318
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=88.75 E-value=0.35 Score=42.00 Aligned_cols=32 Identities=22% Similarity=0.181 Sum_probs=25.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+.||+|+|+|.+|..++..|.++. +++... ++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G-~~V~l~-d~ 37 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGG-FRVKLY-DI 37 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS
T ss_pred CceEEEEeeCHHHHHHHHHHHHCC-CEEEEE-eC
Confidence 579999999999999999998774 665544 44
No 319
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=88.75 E-value=0.44 Score=41.58 Aligned_cols=34 Identities=24% Similarity=0.352 Sum_probs=27.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
++||+|+|+|.+|..++..|.....++ +.+.|..
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~-V~L~D~~ 42 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELAD-VVLYDVV 42 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCE-EEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEECC
Confidence 369999999999999999998765447 6666664
No 320
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=88.69 E-value=0.39 Score=41.75 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=28.3
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcC-CCeEEEEEecc
Q 024629 3 KVKIGINGF-GRIGRLVARVILQR-DDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~-p~~el~~i~~~ 36 (265)
+++|-|.|+ |++|+.+++.|.++ .+.+|+++...
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECC
Confidence 579999999 99999999999983 36888877643
No 321
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=88.43 E-value=0.44 Score=42.03 Aligned_cols=31 Identities=29% Similarity=0.459 Sum_probs=26.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
-.+|||+|+|.+|+.+++.|... ++++.+..
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 190 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAF-GMNVLVWG 190 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CCEEEEEeECHHHHHHHHHHHhC-CCEEEEEC
Confidence 36899999999999999999877 48877653
No 322
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=88.36 E-value=0.44 Score=41.57 Aligned_cols=29 Identities=28% Similarity=0.630 Sum_probs=24.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
.+|||+|+|.+|+.+++.|... ++++.+.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~ 175 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGM-GATVIGE 175 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEE
Confidence 6899999999999999999876 4786654
No 323
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=88.32 E-value=0.48 Score=41.13 Aligned_cols=30 Identities=30% Similarity=0.541 Sum_probs=25.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
.+|||+|+|.+|+.+++.|.... +++.+..
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d 176 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFD-MDIDYFD 176 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEC
Confidence 68999999999999999998764 7876654
No 324
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=88.28 E-value=0.35 Score=40.42 Aligned_cols=31 Identities=13% Similarity=0.388 Sum_probs=27.0
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
+||-|.|+ |++|+.+++.|.++. .++.++..
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 37 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEE-YDIYPFDK 37 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTT-EEEEEECT
T ss_pred eEEEEECCCCHHHHHHHHHHHhCC-CEEEEecc
Confidence 59999999 999999999999874 78877754
No 325
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=88.17 E-value=0.46 Score=41.50 Aligned_cols=30 Identities=20% Similarity=0.479 Sum_probs=25.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
.+|||+|+|.+|+.+++.+... ++++.+..
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d 175 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGF-GAKVIAYD 175 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEC
Confidence 6899999999999999999876 47776543
No 326
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=88.13 E-value=0.53 Score=40.66 Aligned_cols=30 Identities=33% Similarity=0.563 Sum_probs=25.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
..+|||+|+|.+|+.+++.|.... +++.+.
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~ 173 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAFG-MRVVYH 173 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEEEECHHHHHHHHHHHHCC-CEEEEE
Confidence 368999999999999999998774 776544
No 327
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=88.10 E-value=0.48 Score=41.65 Aligned_cols=30 Identities=27% Similarity=0.565 Sum_probs=25.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
.+|||+|+|.+|+.+++.|... ++++.+..
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~-G~~V~~~d 178 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAM-GAKVIAYD 178 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CeEEEEecCHHHHHHHHHHhhC-CCEEEEEC
Confidence 6899999999999999999877 48876654
No 328
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=88.01 E-value=0.46 Score=41.12 Aligned_cols=33 Identities=24% Similarity=0.347 Sum_probs=27.9
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 2 ~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
++++|-|.|+ |.+|+.+++.|.+.. .+++++..
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLD-QKVVGLDN 59 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 4579999999 999999999999874 67777654
No 329
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=87.97 E-value=0.67 Score=37.04 Aligned_cols=30 Identities=20% Similarity=0.354 Sum_probs=24.5
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG-~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
+||+|+| +|.+|+.+++.|.++. .++..+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g-~~V~~~~ 31 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG-HEIVVGS 31 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 3899999 6999999999998874 6766553
No 330
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=87.97 E-value=0.41 Score=41.76 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=26.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
.+||+|+|+|++|..++..|...+.+.-+.+.|.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~ 38 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDV 38 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEec
Confidence 4799999999999999999987765433334444
No 331
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=87.94 E-value=2.5 Score=38.39 Aligned_cols=101 Identities=12% Similarity=0.229 Sum_probs=59.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCCh--------hhhhhheeee-cccCcccccceeeeCCceEEECC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT--------DYMTYMFKYD-SVHGQWKHHELKVKDDKTLLFGE 73 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~--------~~~a~l~~~~-~~~~~~~~~~v~~~~~~~l~~~g 73 (265)
-.||+|=|+|.+|..+++.|.+. +.+++++.|..... +.+..+.+.. +..+... .. ..+.+
T Consensus 235 Gk~vaVQG~GnVG~~aa~~L~e~-GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~-~~-~~~~g------- 304 (450)
T 4fcc_A 235 GMRVSVSGSGNVAQYAIEKAMEF-GARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVA-DY-AKEFG------- 304 (450)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHH-HH-HHHHT-------
T ss_pred CCEEEEeCCChHHHHHHHHHHhc-CCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccc-cc-cccCC-------
Confidence 36899999999999999999887 58999988764211 1111111000 0000000 00 00001
Q ss_pred EEEEEEecCCCCCCCccccCccEEEEec-CCcccHHHHHHHHhCCCcE
Q 024629 74 KPVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKK 120 (265)
Q Consensus 74 ~~i~~~~~~d~~~~~~~~~~~DvV~~at-p~~~~~~~~~~~~~~g~~~ 120 (265)
...+ +.+++ |. .+||+.+=|. +...+.+.++.+.+.|||.
T Consensus 305 --~~~~---~~~~i-~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~ 345 (450)
T 4fcc_A 305 --LVYL---EGQQP-WS-VPVDIALPCATQNELDVDAAHQLIANGVKA 345 (450)
T ss_dssp --CEEE---ETCCG-GG-SCCSEEEECSCTTCBCHHHHHHHHHTTCCE
T ss_pred --cEEe---cCccc-cc-CCccEEeeccccccccHHHHHHHHhcCceE
Confidence 1122 23444 64 5899988774 4556888899988889863
No 332
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=87.92 E-value=0.49 Score=41.26 Aligned_cols=31 Identities=29% Similarity=0.489 Sum_probs=25.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
..+|||+|+|++|+.+++.|... ++++.+..
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d 180 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGF-NMRILYYS 180 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CCEEEEEccCHHHHHHHHHHHhC-CCEEEEEC
Confidence 36899999999999999999876 47766543
No 333
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=87.89 E-value=0.52 Score=41.21 Aligned_cols=31 Identities=32% Similarity=0.516 Sum_probs=25.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
-.+|||+|+|.+|+.+++.|... ++++.+..
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~~-G~~V~~~d 195 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQSF-GMKTIGYD 195 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred cCEEEEEeECHHHHHHHHHHHHC-CCEEEEEC
Confidence 36899999999999999999876 48876554
No 334
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=87.87 E-value=1.5 Score=39.92 Aligned_cols=103 Identities=17% Similarity=0.290 Sum_probs=61.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCC---------hhhhhhheeeeccc-CcccccceeeeCCceEEEC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT---------TDYMTYMFKYDSVH-GQWKHHELKVKDDKTLLFG 72 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~---------~~~~a~l~~~~~~~-~~~~~~~v~~~~~~~l~~~ 72 (265)
..+|+|-|+|.+|..+++.|.+. +.+++++.|.... .+.+..++.+-... +.+. .. .. .+ +
T Consensus 230 g~~v~VqG~GnVG~~~a~~L~~~-GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~-~y---~~--~~--~ 300 (449)
T 1bgv_A 230 GKTVALAGFGNVAWGAAKKLAEL-GAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQ-DY---AD--KF--G 300 (449)
T ss_dssp TCEEEECCSSHHHHHHHHHHHHH-TCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTH-HH---HH--HH--T
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChh-hc---cc--cc--C
Confidence 46899999999999999998876 5899999885311 11112222211111 1111 00 00 00 0
Q ss_pred CEEEEEEecCCCCCCCccccCccEEEEecC-CcccHHHHHHHHhCCCcEEEE
Q 024629 73 EKPVTVFGVRNPEEIPWAETGAEYVVESTG-VFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 73 g~~i~~~~~~d~~~~~~~~~~~DvV~~atp-~~~~~~~~~~~~~~g~~~vvi 123 (265)
. ..+. .+++ |. .++|+.+-|.- .....+.++.+...||| +|+
T Consensus 301 a---~~i~---~~e~-~~-~~~Dil~P~A~~~~I~~~na~~l~a~g~k-iV~ 343 (449)
T 1bgv_A 301 V---QFFP---GEKP-WG-QKVDIIMPCATQNDVDLEQAKKIVANNVK-YYI 343 (449)
T ss_dssp C---EEEE---TCCG-GG-SCCSEEECCSCTTCBCHHHHHHHHHTTCC-EEE
T ss_pred C---EEeC---chhh-hc-CCcceeeccccccccchhhHHHHHhcCCe-EEE
Confidence 1 1222 2344 64 68999988764 45678888888888987 444
No 335
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=87.80 E-value=0.42 Score=41.72 Aligned_cols=31 Identities=23% Similarity=0.321 Sum_probs=25.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
-.+|||+|+|.+|+.+++.|... ++++.+..
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~-G~~V~~~d 175 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGW-GATLQYHE 175 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTS-CCEEEEEC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-CCEEEEEC
Confidence 36899999999999999998876 47866553
No 336
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=87.74 E-value=0.56 Score=41.25 Aligned_cols=27 Identities=30% Similarity=0.493 Sum_probs=23.2
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCC
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDD 27 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~ 27 (265)
|+.+||+|+|+ |.+|..|+-+|...+-
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~l 49 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGAL 49 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhccc
Confidence 56789999999 9999999988877653
No 337
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=87.70 E-value=0.54 Score=41.32 Aligned_cols=30 Identities=27% Similarity=0.381 Sum_probs=25.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
-.+|||+|+|.+|+.+++.|... ++++.+.
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~~-G~~V~~~ 197 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKAF-GFNVLFY 197 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEEEE
T ss_pred CCEEEEEeECHHHHHHHHHHHHC-CCEEEEE
Confidence 36899999999999999999876 4787654
No 338
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=87.62 E-value=0.54 Score=40.55 Aligned_cols=31 Identities=35% Similarity=0.578 Sum_probs=25.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
..+|||+|+|.+|+.+++.|.... +++.+..
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d 172 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIANALG-MNILLYD 172 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CceEEEEccCHHHHHHHHHHHHCC-CEEEEEC
Confidence 368999999999999999998774 7876553
No 339
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=87.61 E-value=0.54 Score=40.67 Aligned_cols=31 Identities=35% Similarity=0.558 Sum_probs=25.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
..+|||+|+|.+|+.+++.|.... +++.+..
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d 172 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANAMG-MKVLAYD 172 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCC-CEEEEEC
Confidence 368999999999999999998774 7876553
No 340
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=87.46 E-value=0.49 Score=41.91 Aligned_cols=30 Identities=30% Similarity=0.585 Sum_probs=25.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
.+|||+|+|.+|+.+++.+... ++++.+..
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~f-G~~V~~~d 206 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGF-RARIRVFD 206 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTS-CCEEEEEC
T ss_pred CEEEEecCCcccHHHHHhhhhC-CCEEEEEC
Confidence 6899999999999999998876 47876553
No 341
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=87.42 E-value=0.54 Score=41.02 Aligned_cols=30 Identities=17% Similarity=0.450 Sum_probs=25.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
.+|||+|+|.+|+.+++.+... ++++.+..
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d 176 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGF-GAKVITYD 176 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEEC
Confidence 6899999999999999999877 47876543
No 342
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=87.42 E-value=0.53 Score=41.11 Aligned_cols=30 Identities=37% Similarity=0.563 Sum_probs=25.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
..+|||+|+|.+|+.+++.+... ++++.+.
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~~-G~~V~~~ 175 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIPF-GVKLYYW 175 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG-TCEEEEE
T ss_pred cCEEEEEccCHHHHHHHHHHHHC-CCEEEEE
Confidence 36899999999999999999876 4776544
No 343
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=87.32 E-value=0.56 Score=41.82 Aligned_cols=29 Identities=21% Similarity=0.361 Sum_probs=25.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
.+|||+|+|.||+.+++.|... ++++.+.
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~-G~~V~~~ 148 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEAL-GIRTLLC 148 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEE
Confidence 6899999999999999999877 4777655
No 344
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=87.28 E-value=0.63 Score=39.82 Aligned_cols=33 Identities=24% Similarity=0.405 Sum_probs=27.9
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+||-|.|+ |++|+.+++.|.++++.+++++...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 34 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG 34 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 37999999 9999999999998866788777643
No 345
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=87.25 E-value=0.53 Score=41.17 Aligned_cols=29 Identities=31% Similarity=0.466 Sum_probs=25.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
.+|||+|+|.+|+++++.+... ++++.+.
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~f-g~~v~~~ 170 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAF-GMKVLCY 170 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred cEEEEECcchHHHHHHHhhccc-Cceeeec
Confidence 5899999999999999999877 4877655
No 346
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=86.97 E-value=0.73 Score=39.93 Aligned_cols=32 Identities=25% Similarity=0.437 Sum_probs=25.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCe-EEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~-el~~i~~~ 36 (265)
..||+|+|+|.+|..++..|..++ + +++ +.|.
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g-~~~v~-l~D~ 40 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKE-LADVV-LVDI 40 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CCEEE-EECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CCeEE-EEec
Confidence 469999999999999999988775 4 544 4444
No 347
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=86.91 E-value=0.68 Score=41.80 Aligned_cols=34 Identities=29% Similarity=0.536 Sum_probs=29.8
Q ss_pred ccEEEEEccChhHHHHHHHHHc-CCCeEEEEEeccC
Q 024629 3 KVKIGINGFGRIGRLVARVILQ-RDDVELVAVNDPF 37 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~-~p~~el~~i~~~~ 37 (265)
-.+|+|+|+|.+|+.+++.|.. . +++++++.++.
T Consensus 212 gktvgI~G~G~VG~~vA~~l~~~~-G~kVv~~sD~~ 246 (419)
T 1gtm_A 212 GKTIAIQGYGNAGYYLAKIMSEDF-GMKVVAVSDSK 246 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CCEEEEEECSS
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhc-CCEEEEEeCCC
Confidence 3689999999999999999988 6 69999998764
No 348
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=86.85 E-value=0.55 Score=40.81 Aligned_cols=25 Identities=20% Similarity=0.282 Sum_probs=22.2
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCC
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDD 27 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~ 27 (265)
++||+|+|+ |.+|..++..|..++.
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~ 30 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDM 30 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCC
Confidence 589999999 9999999999987764
No 349
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=86.84 E-value=0.61 Score=41.54 Aligned_cols=30 Identities=17% Similarity=0.340 Sum_probs=25.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
..+|||+|+|.+|+.+++.|... ++++.+.
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~ 145 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGL-GWKVLVC 145 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHC-CCEEEEE
Confidence 36899999999999999999876 4777554
No 350
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=86.74 E-value=0.68 Score=39.53 Aligned_cols=35 Identities=23% Similarity=0.445 Sum_probs=27.7
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|+.++|-|.|+ |.+|+.+++.|.++. .+++++...
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~ 36 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKG-YEVYGADRR 36 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECSC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEECC
Confidence 66679999999 999999999999874 677776543
No 351
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=86.71 E-value=0.57 Score=41.92 Aligned_cols=29 Identities=24% Similarity=0.417 Sum_probs=24.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
+||+|+|+|++|..++..|.+ +.+++.+.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~--G~~V~~~d 29 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL--QNEVTIVD 29 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHhC--CCEEEEEE
Confidence 389999999999999999887 47776663
No 352
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=86.68 E-value=0.45 Score=43.19 Aligned_cols=36 Identities=11% Similarity=0.141 Sum_probs=27.6
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC-CCeEEEEEecc
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAVNDP 36 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~-p~~el~~i~~~ 36 (265)
|++++|.|||+|..|...+..|.+. |+.+++-+-..
T Consensus 1 M~~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~ 37 (472)
T 3iwa_A 1 MSLKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQA 37 (472)
T ss_dssp ---CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECC
Confidence 7778999999999999999988865 67887777543
No 353
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=86.56 E-value=0.54 Score=42.39 Aligned_cols=35 Identities=20% Similarity=0.174 Sum_probs=28.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC-CCeEEEEEec
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAVND 35 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~-p~~el~~i~~ 35 (265)
|++.+|.|||+|..|...+..|.+. ++.+++.+-.
T Consensus 1 M~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~ 36 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEA 36 (449)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEEC
Confidence 7788999999999999999988865 5678777644
No 354
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=86.36 E-value=0.48 Score=39.98 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=27.8
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcC-CCeEEEEEec
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQR-DDVELVAVND 35 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~-p~~el~~i~~ 35 (265)
|+ +||-|.|+ |.+|+.+++.|.++ ++.+++++..
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 36 (312)
T 2yy7_A 1 MN-PKILIIGACGQIGTELTQKLRKLYGTENVIASDI 36 (312)
T ss_dssp CC-CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEES
T ss_pred CC-ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 54 68999999 99999999999876 4567777654
No 355
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=86.19 E-value=0.78 Score=39.34 Aligned_cols=33 Identities=30% Similarity=0.584 Sum_probs=27.4
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 2 ~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
+|++|-|.|+ |.+|+.+++.|.++. .+|+++..
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 53 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERG-DKVVGIDN 53 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEEC
Confidence 3579999999 999999999999874 67777754
No 356
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=86.12 E-value=0.75 Score=40.25 Aligned_cols=33 Identities=15% Similarity=0.271 Sum_probs=27.2
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
+++|.|.|+ |.+|+.+++.|.++...+|+++..
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r 65 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDN 65 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEEEC
Confidence 468999999 999999999999874267777643
No 357
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=86.12 E-value=0.57 Score=40.61 Aligned_cols=34 Identities=24% Similarity=0.228 Sum_probs=26.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
.+||+|+|+|.+|..++..|..++.+.-+.+.|.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 38 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV 38 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 3799999999999999998887765544445555
No 358
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=86.06 E-value=0.64 Score=41.74 Aligned_cols=29 Identities=24% Similarity=0.371 Sum_probs=24.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
.++||+|+|.||+.+++.+... ++++.+.
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~-G~~V~~~ 174 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESL-GMYVYFY 174 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEE
Confidence 6899999999999999999876 4776554
No 359
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=86.01 E-value=0.79 Score=37.10 Aligned_cols=33 Identities=18% Similarity=0.121 Sum_probs=28.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+.|+.|+|+|-.|+++++.|.+ .++++++..|.
T Consensus 12 ~k~v~IiGAGg~g~~v~~~l~~-~~~~~vgfiDd 44 (220)
T 4ea9_A 12 IGGVVIIGGGGHAKVVIESLRA-CGETVAAIVDA 44 (220)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH-TTCCEEEEECS
T ss_pred CCCEEEEcCCHHHHHHHHHHHh-CCCEEEEEEeC
Confidence 5689999999999999999987 46888888875
No 360
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=86.00 E-value=0.24 Score=41.53 Aligned_cols=31 Identities=26% Similarity=0.266 Sum_probs=24.0
Q ss_pred EEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 5 ~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
|+.|+|+|-+|+.+++.|.+.. ++-+.|.++
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G-~~~I~v~nR 140 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMG-VKDIWVVNR 140 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT-CCCEEEEES
T ss_pred eEEEECcHHHHHHHHHHHHHcC-CCEEEEEeC
Confidence 7999999999999999998874 532344445
No 361
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=85.98 E-value=0.66 Score=40.75 Aligned_cols=26 Identities=27% Similarity=0.319 Sum_probs=22.1
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCC
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRD 26 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p 26 (265)
|++.||+|+|+ |++|..++..+....
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g 32 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMR 32 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcC
Confidence 45789999998 999999998777654
No 362
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=85.86 E-value=0.83 Score=38.64 Aligned_cols=32 Identities=25% Similarity=0.399 Sum_probs=26.5
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
|. +||-|.|+ |.+|+.+++.|.++. .+++++.
T Consensus 1 m~-~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (315)
T 2ydy_A 1 MN-RRVLVTGATGLLGRAVHKEFQQNN-WHAVGCG 33 (315)
T ss_dssp -C-CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CC-CeEEEECCCcHHHHHHHHHHHhCC-CeEEEEc
Confidence 53 68999999 999999999999874 6777664
No 363
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=85.73 E-value=0.83 Score=38.89 Aligned_cols=31 Identities=26% Similarity=0.396 Sum_probs=26.4
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
+||.|.|+ |++|+.+++.|.++. .+++++..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG-LSVVVVDN 33 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 58999999 999999999999874 67777653
No 364
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=85.73 E-value=1.7 Score=39.58 Aligned_cols=104 Identities=13% Similarity=0.250 Sum_probs=59.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCC--------hhhhhhheeeeccc-CcccccceeeeCCceEEECC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT--------TDYMTYMFKYDSVH-GQWKHHELKVKDDKTLLFGE 73 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~--------~~~~a~l~~~~~~~-~~~~~~~v~~~~~~~l~~~g 73 (265)
-.||+|-|+|.+|..+++.|.+. +.++++|.|.... .+.+..+..+.... ++.. ..+. . ..+
T Consensus 239 g~~VaVQG~GnVG~~aa~~L~e~-GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~-~~~~---~----~~~ 309 (456)
T 3r3j_A 239 NKKCLVSGSGNVAQYLVEKLIEK-GAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLK-EYLK---Y----SKT 309 (456)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHH-TCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGG-GGGG---T----CSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchh-hhhh---c----CCC
Confidence 36899999999999999998876 4788888886421 11111110010100 1110 0000 0 001
Q ss_pred EEEEEEecCCCCCCCccccCccEEEEec-CCcccHHHHHHHHhCCCcEEEE
Q 024629 74 KPVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 74 ~~i~~~~~~d~~~~~~~~~~~DvV~~at-p~~~~~~~~~~~~~~g~~~vvi 123 (265)
...+ +.+++ |. .+||+.+=|. +...+.+.++.+.+.++| +|+
T Consensus 310 --a~~v---~~~~i-~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 352 (456)
T 3r3j_A 310 --AKYF---ENQKP-WN-IPCDIAFPCATQNEINENDADLFIQNKCK-MIV 352 (456)
T ss_dssp --CEEE---CSCCG-GG-SCCSEEEECSCTTCBCHHHHHHHHHHTCC-EEE
T ss_pred --ceEe---CCccc-cc-cCccEEEeCCCccchhhHHHHHHHhcCCe-EEE
Confidence 1122 23444 64 5799998874 456688888888777776 444
No 365
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=85.67 E-value=0.58 Score=39.96 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=27.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
|++.+|.|||+|..|..++..|.++ +++++.+-
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vie 33 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRS-GLSYVILD 33 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHS-SCCEEEEC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC-CCCEEEEE
Confidence 7778999999999999999999887 46766554
No 366
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=85.65 E-value=0.68 Score=39.21 Aligned_cols=31 Identities=26% Similarity=0.383 Sum_probs=25.3
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++|-|.|+ |++|+.+++.|.++. +++.+..+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~~~ 33 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVIDNL 33 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEECCC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEEcC
Confidence 48999999 999999999999886 55666544
No 367
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=85.43 E-value=0.7 Score=39.61 Aligned_cols=35 Identities=17% Similarity=0.379 Sum_probs=27.5
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCC------eEEEEEec
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDD------VELVAVND 35 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~------~el~~i~~ 35 (265)
|++++|-|.|+ |.+|+.+++.|.++.. .+++.+..
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r 53 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDV 53 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEES
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEc
Confidence 34579999999 9999999999988752 56666543
No 368
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=85.26 E-value=0.55 Score=40.96 Aligned_cols=31 Identities=23% Similarity=0.374 Sum_probs=26.4
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
|||.|.|+ |.+|+.+++.|.+++.++++.+.
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d 32 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVH 32 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEC
Confidence 38999999 99999999999988766776653
No 369
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=85.13 E-value=0.75 Score=40.02 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=26.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++||+|+|+|.+|..++.+|..++.+.-+.+.|.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di 42 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 5799999999999999998887765544445555
No 370
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=85.09 E-value=0.68 Score=38.48 Aligned_cols=33 Identities=18% Similarity=0.325 Sum_probs=27.1
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
|+|.+|-|.|+ |.+|+.+++.|.++. .+++.+.
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G-~~V~~~~ 34 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMA-EILRLAD 34 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGE-EEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcC-CEEEEEe
Confidence 77778999999 999999999999874 5655443
No 371
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=84.91 E-value=1 Score=39.02 Aligned_cols=33 Identities=30% Similarity=0.300 Sum_probs=25.2
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCe-EEEEEecc
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDV-ELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~-el~~i~~~ 36 (265)
++||+|+|+ |++|..++..|...+.+ +|+. .|.
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l-~Di 42 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHL-YDV 42 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEE-EES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEE-EeC
Confidence 479999996 99999999999876533 4444 443
No 372
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=84.79 E-value=0.8 Score=41.08 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=28.5
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC-CCeEEEEEecc
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAVNDP 36 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~-p~~el~~i~~~ 36 (265)
|+ .||.|+|+|+.|...++.|.+. ++++|+-|...
T Consensus 1 M~-K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~ 36 (430)
T 3hyw_A 1 MA-KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDR 36 (430)
T ss_dssp -C-CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSS
T ss_pred CC-CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCC
Confidence 65 5899999999999999998764 77888877654
No 373
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=84.62 E-value=0.86 Score=39.35 Aligned_cols=33 Identities=9% Similarity=0.086 Sum_probs=27.7
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
.++|-|.|+ |.+|+.+++.|.++. .+++++...
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 42 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSLT 42 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CeEEEEeCC
Confidence 479999999 999999999999874 677776543
No 374
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=84.43 E-value=0.9 Score=41.69 Aligned_cols=31 Identities=13% Similarity=0.347 Sum_probs=25.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
.+||+|+|+||+|..+...|.+.. .+++.+.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G-~~V~~~d 38 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIG-HDVFCLD 38 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CceEEEECcCHHHHHHHHHHHhCC-CEEEEEE
Confidence 379999999999999999998763 6766653
No 375
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=84.39 E-value=0.95 Score=34.94 Aligned_cols=31 Identities=13% Similarity=0.188 Sum_probs=25.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
|.+|.|+|+|.+|.+++..|.+. +.+++.+.
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~-g~~v~lie 31 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARA-GLKVLVLD 31 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCcEEEEe
Confidence 36999999999999999999877 35665554
No 376
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=84.38 E-value=0.94 Score=39.54 Aligned_cols=29 Identities=21% Similarity=0.352 Sum_probs=24.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
+||.|||+|.+|..++..|.++ +++++-+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~-G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH-GIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCCEEEE
Confidence 6999999999999999999887 4776554
No 377
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=84.25 E-value=1 Score=42.79 Aligned_cols=35 Identities=23% Similarity=0.383 Sum_probs=29.4
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++++|-|.|+ |.+|+.+++.|.++++.+|+++...
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~ 349 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG 349 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcC
Confidence 3578999999 9999999999998756888877543
No 378
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=84.04 E-value=5.4 Score=36.18 Aligned_cols=86 Identities=14% Similarity=0.059 Sum_probs=52.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEe-c
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG-V 81 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~-~ 81 (265)
..+|.|+|+|.+|...++.|.+.. .+++.+. +.... .+..+. +.+ .+ .... .
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~g-a~V~vi~-~~~~~-~~~~l~----------------~~~-~i-------~~~~~~ 64 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAG-ARLTVNA-LTFIP-QFTVWA----------------NEG-ML-------TLVEGP 64 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-BEEEEEE-SSCCH-HHHHHH----------------TTT-SC-------EEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCc-CEEEEEc-CCCCH-HHHHHH----------------hcC-CE-------EEEECC
Confidence 378999999999999999999874 6665554 32222 111110 001 01 1111 1
Q ss_pred CCCCCCCccccCccEEEEecCCc-ccHHHHHHHHhCCCc
Q 024629 82 RNPEEIPWAETGAEYVVESTGVF-TDKDKAAAHLKGGAK 119 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~-~~~~~~~~~~~~g~~ 119 (265)
.+++++ .++|+||-||+.. ........+.+.|+.
T Consensus 65 ~~~~~l----~~~~lVi~at~~~~~n~~i~~~a~~~~i~ 99 (457)
T 1pjq_A 65 FDETLL----DSCWLAIAATDDDTVNQRVSDAAESRRIF 99 (457)
T ss_dssp CCGGGG----TTCSEEEECCSCHHHHHHHHHHHHHTTCE
T ss_pred CCcccc----CCccEEEEcCCCHHHHHHHHHHHHHcCCE
Confidence 122333 5789999999876 466667777788873
No 379
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=83.69 E-value=1.1 Score=38.36 Aligned_cols=30 Identities=27% Similarity=0.463 Sum_probs=25.9
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
++|-|.|+ |.+|+.+++.|.++. .+|+++.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~ 32 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG-IDLIVFD 32 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC-CEEEEEe
Confidence 48999999 999999999999864 6777765
No 380
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=83.68 E-value=1.2 Score=39.36 Aligned_cols=34 Identities=24% Similarity=0.371 Sum_probs=27.4
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
|+.++|+|||+|..|...+..|.++ +.+++.+-.
T Consensus 1 m~~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~ 34 (384)
T 2bi7_A 1 MKSKKILIVGAGFSGAVIGRQLAEK-GHQVHIIDQ 34 (384)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEES
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC-CCcEEEEEe
Confidence 7778999999999999999999877 467666644
No 381
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=83.65 E-value=0.91 Score=36.96 Aligned_cols=34 Identities=24% Similarity=0.221 Sum_probs=27.4
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
|+..+|.|+|+|..|.+++..|.++ +.+++.+..
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~-g~~v~lie~ 34 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQK-GVRVGLLTQ 34 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEec
Confidence 7778999999999999999999887 466665543
No 382
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=83.64 E-value=1 Score=38.99 Aligned_cols=32 Identities=19% Similarity=0.343 Sum_probs=26.0
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
++|.|.|+ |.+|+.+++.|.+....+++++..
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 79 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDN 79 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 68999999 999999999999875366766654
No 383
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=83.58 E-value=0.94 Score=39.07 Aligned_cols=31 Identities=35% Similarity=0.482 Sum_probs=26.6
Q ss_pred EEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 5 KIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 5 ~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
||-|.|+ |.+|+.+++.|.++++.+++.+..
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r 33 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEec
Confidence 7999999 999999999999865678877753
No 384
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=83.57 E-value=1.5 Score=37.42 Aligned_cols=32 Identities=28% Similarity=0.358 Sum_probs=27.0
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
+++|-|.|+ |.+|+.+++.|.++. .+++.+..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHG-YDVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCC-CcEEEEec
Confidence 479999999 999999999999884 67776643
No 385
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=83.54 E-value=2.3 Score=36.04 Aligned_cols=32 Identities=22% Similarity=0.302 Sum_probs=24.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCe-EEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~-el~~i~~~ 36 (265)
..++.|+|+|-+|+.+++.|.+.. + ++ .|.++
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G-~~~v-~v~~R 158 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQ-PASI-TVTNR 158 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTC-CSEE-EEEES
T ss_pred CCEEEEECchHHHHHHHHHHHhcC-CCeE-EEEEC
Confidence 358999999999999999999874 5 44 44445
No 386
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=83.53 E-value=0.95 Score=39.06 Aligned_cols=33 Identities=21% Similarity=0.324 Sum_probs=26.6
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCe-EEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~-el~~i~ 34 (265)
|++.+|.|||+|..|..++..|.+.. . +++-+-
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g-~~~v~lie 35 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFG-ITDVIILE 35 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTT-CCCEEEEC
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcC-CCcEEEEe
Confidence 66689999999999999999998763 4 555553
No 387
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=83.49 E-value=0.94 Score=38.99 Aligned_cols=35 Identities=11% Similarity=0.003 Sum_probs=27.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
..+|+|+|+|.+|+.+++.|.+..+++-+.+.++.
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~ 169 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRT 169 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSS
T ss_pred CcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 36899999999999999998875346556676664
No 388
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=83.42 E-value=0.48 Score=40.34 Aligned_cols=32 Identities=19% Similarity=0.130 Sum_probs=24.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
.++.|+|+|-+|+.+++.|.+.. ++-+.|.++
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G-~~~v~v~~R 149 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIV-RPTLTVANR 149 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTC-CSCCEEECS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CCEEEEEeC
Confidence 58999999999999999998774 522334444
No 389
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=83.20 E-value=1.3 Score=40.50 Aligned_cols=93 Identities=20% Similarity=0.254 Sum_probs=51.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCE--EEEEEec
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK--PVTVFGV 81 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~--~i~~~~~ 81 (265)
.||.|+|+|.+|..+++.|.++ .++.-|-......+.++..| + + .+.++|. +..++.
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~~--~~v~iIE~d~~r~~~la~~l---------~--------~-~~Vi~GD~td~~~L~- 294 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQT--YSVKLIERNLQRAEKLSEEL---------E--------N-TIVFCGDAADQELLT- 294 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT--SEEEEEESCHHHHHHHHHHC---------T--------T-SEEEESCTTCHHHHH-
T ss_pred cEEEEEcchHHHHHHHHHhhhc--CceEEEecCHHHHHHHHHHC---------C--------C-ceEEeccccchhhHh-
Confidence 5899999999999999999765 56555543322233332111 1 1 1222221 111111
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHH-HHHhCCCcEEEE
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAA-AHLKGGAKKVII 123 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~-~~~~~g~~~vvi 123 (265)
-+.+ .++|+++-+|+....-=.+. .+.+.|+++++.
T Consensus 295 --ee~i----~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 295 --EENI----DQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp --HTTG----GGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred --hcCc----hhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 1233 57899999999864322222 333578887765
No 390
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=83.12 E-value=1.1 Score=38.57 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=25.0
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+||+|+|+ |++|..++..|..++.+.-+.+.|.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di 34 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDI 34 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeC
Confidence 48999999 9999999999987753333444454
No 391
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=83.08 E-value=1.3 Score=40.51 Aligned_cols=31 Identities=23% Similarity=0.228 Sum_probs=25.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
+.||+|+|+|.+|..++..+.+. +++|+...
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a-G~~V~l~D 84 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA-GIETFLVV 84 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCeEEEEE
Confidence 47999999999999999999877 47766553
No 392
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=83.02 E-value=0.88 Score=36.17 Aligned_cols=34 Identities=21% Similarity=0.077 Sum_probs=24.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
|+|.|+.|+|+|--|+++++.+.... .++++..|
T Consensus 1 ~~m~~~~I~Gagg~gk~v~~~~~~~~-~~v~~f~D 34 (194)
T 3bfp_A 1 ARTEKIYIYGASGHGLVCEDVAKNMG-YKECIFLD 34 (194)
T ss_dssp CCCSEEEEEC--CHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CCCccEEEEeCCHHHHHHHHHHHhCC-CeEEEEEe
Confidence 45678999999778999999886543 66665554
No 393
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=82.96 E-value=1.2 Score=38.16 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=26.9
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
|+ ++|-|.|+ |.+|+.+++.|.++. .+++++.
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (348)
T 1ek6_A 1 MA-EKVLVTGGAGYIGSHTVLELLEAG-YLPVVID 33 (348)
T ss_dssp CC-SEEEEETTTSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 54 69999999 999999999998874 6777764
No 394
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=82.80 E-value=1 Score=39.56 Aligned_cols=32 Identities=19% Similarity=0.424 Sum_probs=25.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
-+|.|+|+|.+|..+++++.... .+++++...
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~~ 220 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFG-SKVTVISTS 220 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 47999999999999999887764 677766543
No 395
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=82.41 E-value=2 Score=37.73 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=24.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
..||.|+|+|-+|.+++..|.... +.=+.+.|.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aG-vg~i~lvD~ 150 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSG-IGEIILIDN 150 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC-CCeEEEECC
Confidence 368999999999999999998764 433344443
No 396
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=82.28 E-value=1.2 Score=36.88 Aligned_cols=32 Identities=19% Similarity=0.081 Sum_probs=26.1
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
|+.+|.|||+|..|...+..|.++. ++++-+-
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g-~~v~lie 32 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRAR-KNILLVD 32 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC-CCEEEEe
Confidence 2489999999999999999998774 6666554
No 397
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=82.27 E-value=1.5 Score=37.42 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=27.3
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
.++|-|.|+ |.+|+.+++.|.++. .+|+++..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQG-HEILVIDN 52 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGT-CEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 478999999 999999999999874 67777654
No 398
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=82.26 E-value=1 Score=40.92 Aligned_cols=30 Identities=17% Similarity=0.215 Sum_probs=25.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
|.+|+|+|.||+|.-++-.+.+. +++++++
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~-G~~V~g~ 50 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL-GHRVVGY 50 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCEEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHHhC-CCcEEEE
Confidence 56999999999999998888765 4788776
No 399
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=82.22 E-value=0.67 Score=40.19 Aligned_cols=33 Identities=15% Similarity=0.276 Sum_probs=25.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
-+|.|+|+|.+|...+.++......+++++...
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~ 205 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAVSAARVIAVDLD 205 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 478999999999999988876645677777543
No 400
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=82.21 E-value=1.1 Score=39.16 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=25.4
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
-+|.|+|+ |.+|...+.++......+++++...
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~ 206 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASR 206 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 36899997 9999999987765345788777653
No 401
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=82.19 E-value=1.5 Score=40.76 Aligned_cols=30 Identities=40% Similarity=0.585 Sum_probs=25.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
..+|||+|+|.+|+.+++.|... ++++.+.
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~-G~~V~~~ 171 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAF-GAYVVAY 171 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCEEEEE
Confidence 36899999999999999999877 4777655
No 402
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=82.15 E-value=1.1 Score=40.35 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=28.6
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC-CCeEEEEEec
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAVND 35 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~-p~~el~~i~~ 35 (265)
|++.+|.|||+|.+|...+..|.++ |+.+++.+-.
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~ 37 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEA 37 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEEC
Confidence 7778999999999999999988875 4477766643
No 403
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=82.06 E-value=1.6 Score=38.42 Aligned_cols=31 Identities=19% Similarity=0.399 Sum_probs=26.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
..+|.|||+|.+|..++..|.++ +++++.+-
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~-G~~v~v~E 56 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQN-GIDVSVYE 56 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCCEEEEe
Confidence 46999999999999999999887 47766554
No 404
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=82.01 E-value=1.5 Score=38.56 Aligned_cols=32 Identities=16% Similarity=0.134 Sum_probs=26.4
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
+..+|.|||+|.+|..++..|.++ +++++.+-
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~-G~~v~v~E 35 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA-GVDVDVYE 35 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCCEEEEe
Confidence 357999999999999999999887 47766553
No 405
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=81.93 E-value=1.1 Score=41.81 Aligned_cols=36 Identities=25% Similarity=0.207 Sum_probs=29.6
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC-CCeEEEEEecc
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAVNDP 36 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~-p~~el~~i~~~ 36 (265)
|++.+|.|||+|..|...+..|.+. ++.+++.+-..
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~ 70 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERG 70 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECC
Confidence 5578999999999999999988865 57888777543
No 406
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=81.85 E-value=1.1 Score=38.61 Aligned_cols=32 Identities=41% Similarity=0.591 Sum_probs=24.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCe-EEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~-el~~i~~~ 36 (265)
+||+|+|+|.+|..++..|...... +++. .|+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l-~D~ 33 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVL-IDV 33 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEE-ECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEE-EeC
Confidence 4899999999999999988765422 4444 444
No 407
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=81.66 E-value=1.6 Score=37.85 Aligned_cols=32 Identities=22% Similarity=0.337 Sum_probs=27.2
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++|-|.|+ |.+|+.+++.|.++. .+|+++...
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 57 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKG-YEVHGIVRR 57 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred cEEEEECCCchHHHHHHHHHHHCC-CEEEEEECC
Confidence 68999999 999999999999874 677777543
No 408
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=81.25 E-value=1.8 Score=37.04 Aligned_cols=31 Identities=23% Similarity=0.330 Sum_probs=25.5
Q ss_pred cEEEEEccChhHHHHHHHHHcC--CCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQR--DDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~--p~~el~~i~ 34 (265)
.+|.|||+|.+|..++..|.+. .+++++.+-
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~E 34 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWD 34 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEEC
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEE
Confidence 5899999999999999999872 457766653
No 409
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=81.24 E-value=0.62 Score=38.57 Aligned_cols=32 Identities=13% Similarity=0.124 Sum_probs=26.4
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
|.+|-|.|+ |.+|+.+++.|.++. .+++.+..
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSDI 34 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTE-EEEEECCS
T ss_pred CceEEEECCCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 468999999 999999999998874 67666543
No 410
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=81.24 E-value=1.5 Score=38.20 Aligned_cols=33 Identities=15% Similarity=0.064 Sum_probs=25.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
|+..+|.|||+|..|..++..|.++ +++++.+-
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~-G~~v~viE 41 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQN-GWDVRLHE 41 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCCEEEEe
Confidence 3357899999999999999999887 47765553
No 411
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=81.16 E-value=3.1 Score=36.17 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=25.0
Q ss_pred cEEEEEccChhHHHH-HHHH-HcCCCeE-EEEEecc
Q 024629 4 VKIGINGFGRIGRLV-ARVI-LQRDDVE-LVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l-~r~L-~~~p~~e-l~~i~~~ 36 (265)
-+|.|+|+|.+|... +.++ ... +.+ ++++...
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~ 208 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRR 208 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCC
Confidence 689999999999999 8877 544 566 7777654
No 412
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=81.10 E-value=2.2 Score=38.36 Aligned_cols=35 Identities=34% Similarity=0.588 Sum_probs=30.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
..||+|.|+|.+|+.++++|.+..+.+++++.|..
T Consensus 209 g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~ 243 (415)
T 2tmg_A 209 KATVAVQGFGNVGQFAALLISQELGSKVVAVSDSR 243 (415)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 47999999999999999999872369999999874
No 413
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=81.05 E-value=1.2 Score=37.54 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=27.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
+.+|.|||+|.+|..++..|.++++++++-+-.
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk 71 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQ 71 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEES
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEEC
Confidence 458999999999999999999876688766643
No 414
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=80.81 E-value=2.1 Score=34.58 Aligned_cols=35 Identities=14% Similarity=0.260 Sum_probs=28.6
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCC-eEEEEEec
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDD-VELVAVND 35 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~-~el~~i~~ 35 (265)
|++.+|-|.|+ |.+|+++++.|.++.. .+++.+..
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r 37 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR 37 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEES
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEec
Confidence 66678999999 9999999999998753 66666643
No 415
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=80.79 E-value=1.7 Score=37.80 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=27.1
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
.+|-|.|+ |.+|+.+++.|.++. .+|+++...
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~r~ 61 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKG-YEVHGLIRR 61 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCC-CEEEEEecC
Confidence 68999999 999999999999874 677777543
No 416
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=80.75 E-value=1.5 Score=37.50 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=25.9
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
+++|-|.|+ |++|+.+++.|.++. .+|+++..
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r 51 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQG-RTVRGFDL 51 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 578999999 999999999999874 67776643
No 417
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=80.71 E-value=1.6 Score=37.54 Aligned_cols=33 Identities=27% Similarity=0.327 Sum_probs=25.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+||+|+|+|.+|..++..|..++-+.-+.+.|.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 33 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDL 33 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 489999999999999998887754444445555
No 418
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=80.67 E-value=1.1 Score=41.04 Aligned_cols=31 Identities=23% Similarity=0.467 Sum_probs=25.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+||+|+|+|.+|..+++.|.++. +++. +.++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G-~~V~-v~dr 32 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG-FKVA-VFNR 32 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CEEE-EEeC
Confidence 48999999999999999998874 5654 4444
No 419
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=80.56 E-value=1.3 Score=40.42 Aligned_cols=32 Identities=25% Similarity=0.437 Sum_probs=26.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
.|||-|+|+|.+|..+++.|... +.+++.|-.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~-~~~v~vId~ 34 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGE-NNDITIVDK 34 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCST-TEEEEEEES
T ss_pred cCEEEEECCCHHHHHHHHHHHHC-CCCEEEEEC
Confidence 47999999999999999999876 477776643
No 420
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=80.53 E-value=2.2 Score=36.30 Aligned_cols=33 Identities=15% Similarity=0.330 Sum_probs=27.5
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
++||-|.|+ |.+|+.+++.|.++. .+++++...
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~ 47 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKG-YRVHGLVAR 47 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CeEEEEeCC
Confidence 579999999 999999999999874 688777644
No 421
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=80.52 E-value=1.3 Score=37.60 Aligned_cols=30 Identities=23% Similarity=0.246 Sum_probs=25.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
+.+|.|||+|.+|..++..|.++ +++++.+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~-G~~V~vl 31 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLF 31 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHC-CCcEEEE
Confidence 47899999999999999999887 4666555
No 422
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=80.26 E-value=1.5 Score=38.11 Aligned_cols=31 Identities=23% Similarity=0.220 Sum_probs=24.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
-||+|+|+|.+|+.++..+..+ +++++ +.|.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~-G~~V~-l~D~ 37 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG-GFRVK-LYDI 37 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEE-EECS
T ss_pred CeEEEECCcHHHHHHHHHHHhC-CCeEE-EEEC
Confidence 5899999999999999988877 46654 3444
No 423
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=80.04 E-value=3.1 Score=35.05 Aligned_cols=32 Identities=16% Similarity=0.096 Sum_probs=24.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
.++.|+|+|-+|+.+++.|.+.. +.-+.|.++
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G-~~~v~i~~R 152 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAG-PSELVIANR 152 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTC-CSEEEEECS
T ss_pred CEEEEECccHHHHHHHHHHHHcC-CCEEEEEeC
Confidence 58999999999999999998874 533344455
No 424
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=80.00 E-value=1.5 Score=37.96 Aligned_cols=35 Identities=17% Similarity=0.128 Sum_probs=29.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
..+++|+|+|.+|+..++.|.....++.+.+.++.
T Consensus 125 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~ 159 (322)
T 1omo_A 125 SSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVR 159 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSS
T ss_pred CCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCC
Confidence 36899999999999999998874457778888874
No 425
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=79.84 E-value=1.8 Score=37.08 Aligned_cols=32 Identities=31% Similarity=0.377 Sum_probs=23.9
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCe-EEEEEecc
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDV-ELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~-el~~i~~~ 36 (265)
+||+|+|+ |.+|..++..|...+.+ |++. .|.
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L-~Di 34 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVF-VDI 34 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEE-ECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEE-EcC
Confidence 48999996 99999999988776533 4443 344
No 426
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=79.80 E-value=1.7 Score=39.58 Aligned_cols=36 Identities=22% Similarity=0.258 Sum_probs=24.7
Q ss_pred CCccEEEEEccChh--HHHHHHHHHcCCCe-EEEEEecc
Q 024629 1 MGKVKIGINGFGRI--GRLVARVILQRDDV-ELVAVNDP 36 (265)
Q Consensus 1 m~~~~V~IiG~G~~--G~~l~r~L~~~p~~-el~~i~~~ 36 (265)
|+++||+|+|+|.+ |..++..|...+.+ .=+.+.|.
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~~~~~geV~L~Di 41 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDL 41 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECS
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhccccCCeEEEEeC
Confidence 45689999999986 67888887765422 12345555
No 427
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=79.69 E-value=2.1 Score=38.37 Aligned_cols=31 Identities=26% Similarity=0.381 Sum_probs=25.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCe--EEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDV--ELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~--el~~i~ 34 (265)
..+|+|||+|..|..+++.|.++. . +++.+-
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G-~~~~V~v~E 38 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEK-AFDQVTLFE 38 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT-CCSEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHhcC-CCCCeEEEe
Confidence 479999999999999999999874 4 665553
No 428
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=79.62 E-value=1.4 Score=39.45 Aligned_cols=36 Identities=19% Similarity=0.180 Sum_probs=28.8
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHc--CCCeEEEEEecc
Q 024629 1 MG-KVKIGINGFGRIGRLVARVILQ--RDDVELVAVNDP 36 (265)
Q Consensus 1 m~-~~~V~IiG~G~~G~~l~r~L~~--~p~~el~~i~~~ 36 (265)
|+ |.+|.|||+|..|.+.+..|.+ .++.+++-+...
T Consensus 1 M~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~ 39 (437)
T 3sx6_A 1 MRGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAN 39 (437)
T ss_dssp CTTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSS
T ss_pred CCCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCC
Confidence 54 6799999999999999999887 256887777543
No 429
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=79.37 E-value=0.99 Score=39.71 Aligned_cols=31 Identities=23% Similarity=0.460 Sum_probs=24.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
-+|.|+|+|.+|...++++... +.+++++..
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~ 226 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTT 226 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeC
Confidence 4799999999999999988766 467666653
No 430
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=79.30 E-value=1.9 Score=38.35 Aligned_cols=34 Identities=9% Similarity=0.042 Sum_probs=27.7
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
+++|-|.|+ |.+|+.+++.|.+. +.+|.++....
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 103 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGY-SHRIYCFIRAD 103 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTT-EEEEEEEEECS
T ss_pred CCEEEEecCCcHHHHHHHHHHHcC-CCEEEEEECCC
Confidence 568999999 99999999999655 47877776543
No 431
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=79.22 E-value=2.5 Score=38.30 Aligned_cols=34 Identities=32% Similarity=0.598 Sum_probs=30.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
..||+|.|+|.+|+.+++.|.+. +.++++|.|..
T Consensus 235 g~~vaVqGfGnVG~~~a~~L~e~-GakvVavsD~~ 268 (440)
T 3aog_A 235 GARVAIQGFGNVGNAAARAFHDH-GARVVAVQDHT 268 (440)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEECSS
T ss_pred CCEEEEeccCHHHHHHHHHHHHC-CCEEEEEEcCC
Confidence 47999999999999999999887 59999999874
No 432
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=79.20 E-value=1.5 Score=38.96 Aligned_cols=32 Identities=28% Similarity=0.464 Sum_probs=26.3
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
.++|-|.|+ |.+|+++++.|.++...+++.+.
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~ 67 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVD 67 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEE
Confidence 468999999 99999999999987535666654
No 433
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=78.96 E-value=1.6 Score=39.30 Aligned_cols=35 Identities=23% Similarity=0.163 Sum_probs=30.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
||+.||.|+|.|.+|..+++.+.+. +++++++.+.
T Consensus 4 m~~~kiLI~g~g~~a~~i~~aa~~~-G~~~v~v~~~ 38 (446)
T 3ouz_A 4 MEIKSILIANRGEIALRALRTIKEM-GKKAICVYSE 38 (446)
T ss_dssp TCCCEEEECCCHHHHHHHHHHHHHT-TCEEEEEEEG
T ss_pred cccceEEEECCCHHHHHHHHHHHHc-CCEEEEEEcC
Confidence 7788999999999999999999988 5898888643
No 434
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=78.96 E-value=2.4 Score=37.59 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=26.9
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC-CCeEEEEEecc
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAVNDP 36 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~-p~~el~~i~~~ 36 (265)
|+ .+|.|||+|..|...++.|.++ ++.+++-+...
T Consensus 1 M~-~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~ 36 (410)
T 3ef6_A 1 MA-THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDE 36 (410)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECS
T ss_pred CC-CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECC
Confidence 54 6999999999999999999876 34557777554
No 435
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=78.83 E-value=1.8 Score=36.78 Aligned_cols=31 Identities=16% Similarity=0.097 Sum_probs=24.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCe-EEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~-el~~i~~~ 36 (265)
.++.|+|+|-+|+.++..|.+.. + ++. |.++
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G-~~~v~-v~nR 154 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNF-AKDIY-VVTR 154 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTT-CSEEE-EEES
T ss_pred CEEEEECCcHHHHHHHHHHHHcC-CCEEE-EEeC
Confidence 58999999999999999998874 6 444 4445
No 436
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=78.73 E-value=4.4 Score=37.10 Aligned_cols=84 Identities=19% Similarity=0.211 Sum_probs=49.3
Q ss_pred ccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEec
Q 024629 3 KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~-l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~ 81 (265)
+.||.|+|.|.+|.. ++++|.++. .++.+ .|...... ...| . +.| +.++..
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G-~~V~~-~D~~~~~~-~~~l----------~------~~g---------i~~~~g 73 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEG-YQISG-SDLAPNSV-TQHL----------T------ALG---------AQIYFH 73 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTT-CEEEE-ECSSCCHH-HHHH----------H------HTT---------CEEESS
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCC-CeEEE-EECCCCHH-HHHH----------H------HCC---------CEEECC
Confidence 368999999999996 899988884 66553 44432211 1100 0 112 223333
Q ss_pred CCCCCCCccccCccEEEEecCCcccHHHHHHHHhCCC
Q 024629 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (265)
Q Consensus 82 ~d~~~~~~~~~~~DvV~~atp~~~~~~~~~~~~~~g~ 118 (265)
.+++.+ .++|+||-+.+-......+..+.++|+
T Consensus 74 ~~~~~~----~~~d~vV~Spgi~~~~p~~~~a~~~gi 106 (494)
T 4hv4_A 74 HRPENV----LDASVVVVSTAISADNPEIVAAREARI 106 (494)
T ss_dssp CCGGGG----TTCSEEEECTTSCTTCHHHHHHHHTTC
T ss_pred CCHHHc----CCCCEEEECCCCCCCCHHHHHHHHCCC
Confidence 344443 468999987654444445566677887
No 437
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=78.70 E-value=2.4 Score=36.06 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=26.5
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
++||-|.|+ |++|+.+++.|.++. .+++++..
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G-~~V~~~~r 41 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKG-YAVNTTVR 41 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC-CEEEEEEc
Confidence 368999999 999999999998874 67776554
No 438
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=78.62 E-value=2.1 Score=39.44 Aligned_cols=30 Identities=13% Similarity=0.219 Sum_probs=25.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
-.+|+|+|+|.+|+.+++.|... ++++.+.
T Consensus 277 GktVgIIG~G~IG~~vA~~l~~~-G~~V~v~ 306 (494)
T 3d64_A 277 GKIAVVAGYGDVGKGCAQSLRGL-GATVWVT 306 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHHHC-CCEEEEE
Confidence 36899999999999999999977 4776554
No 439
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=78.22 E-value=2.4 Score=36.37 Aligned_cols=33 Identities=24% Similarity=0.264 Sum_probs=27.3
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCC----eEEEEEecc
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDD----VELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~----~el~~i~~~ 36 (265)
+||-|.|+ |++|+.+++.|.++.. .+++++...
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~ 39 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARR 39 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCC
Confidence 58999999 9999999999988752 787777543
No 440
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=78.10 E-value=3 Score=36.96 Aligned_cols=83 Identities=12% Similarity=0.067 Sum_probs=50.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccCCChhhhhhheeeecccCcccccceeeeCCceEEECCEEEEEEecCC
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~~~~~~~a~l~~~~~~~~~~~~~~v~~~~~~~l~~~g~~i~~~~~~d 83 (265)
.+|++.|+|.-|..++..+--.++. +.++.|.. +.+ .|+ .+.|..++|+.+
T Consensus 320 k~v~~yGa~~~g~~l~~~~~~~~~~-i~~~~D~~--~~k----------~g~--------------~~~g~~ipi~~p-- 370 (416)
T 4e2x_A 320 RSVVGYGATAKSATVTNFCGIGPDL-VHSVYDTT--PDK----------QNR--------------LTPGAHIPVRPA-- 370 (416)
T ss_dssp CCEEEECCCSHHHHHHHHHTCCTTT-SCCEEESC--GGG----------TTE--------------ECTTTCCEEEEG--
T ss_pred CeEEEEccccHHHHHHHhcCCCcce-eeEEEeCC--ccc----------cCc--------------cCCCCCCcCCCH--
Confidence 4799999999999999887655544 66666652 211 111 224444667653
Q ss_pred CCCCCccccCccEEEEecCCcccHHHH---HHHHhCCCc
Q 024629 84 PEEIPWAETGAEYVVESTGVFTDKDKA---AAHLKGGAK 119 (265)
Q Consensus 84 ~~~~~~~~~~~DvV~~atp~~~~~~~~---~~~~~~g~~ 119 (265)
+++. ..++|+|+...++. ..+.. ..+.+.|-|
T Consensus 371 -~~~~--~~~~d~vl~~~~~~-~~ei~~~~~~~~~~g~~ 405 (416)
T 4e2x_A 371 -SAFS--DPYPDYALLFAWNH-AEEIMAKEQEFHQAGGR 405 (416)
T ss_dssp -GGCC--SSCCSEEEESCGGG-HHHHHHHCHHHHHTTCE
T ss_pred -HHHh--hcCCCEEEEecchh-HHHHHHHHHHHHhcCCE
Confidence 3332 35789999887765 33443 345566654
No 441
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=78.02 E-value=2.2 Score=35.47 Aligned_cols=32 Identities=28% Similarity=0.557 Sum_probs=27.0
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
..||-|.|+ |++|+.+++.|.++. .+++++..
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 44 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKN-VEVIPTDV 44 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSS-EEEEEECT
T ss_pred cceEEEECCCChHHHHHHHHHHhCC-CeEEeccC
Confidence 478999999 999999999999874 78777643
No 442
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=78.00 E-value=2.4 Score=37.70 Aligned_cols=32 Identities=19% Similarity=0.474 Sum_probs=28.0
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
++.||+|+|.|..|+.+++.+.+. +++++.+.
T Consensus 23 ~~~~I~ilGgG~lg~~l~~aa~~l-G~~v~~~d 54 (403)
T 3k5i_A 23 NSRKVGVLGGGQLGRMLVESANRL-NIQVNVLD 54 (403)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEE
Confidence 367999999999999999999887 48888876
No 443
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=77.88 E-value=3.2 Score=36.47 Aligned_cols=32 Identities=25% Similarity=0.480 Sum_probs=27.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
+.||+|+|.|..|+.+++.+.+. +++++.+..
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~l-G~~viv~d~ 43 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKM-GYKVVVLDP 43 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEEC
Confidence 46999999999999999999888 488887743
No 444
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=77.87 E-value=2.5 Score=36.45 Aligned_cols=31 Identities=16% Similarity=0.269 Sum_probs=26.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
+.+|.|||+|.+|..++..|.++ +.+++.+-
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~-G~~V~vle 36 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARK-GYSVHILA 36 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCEEEEEe
Confidence 57899999999999999999877 47776664
No 445
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=77.76 E-value=1.3 Score=37.59 Aligned_cols=33 Identities=24% Similarity=0.270 Sum_probs=25.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
.++.|+|+|-+|+.+++.|.+.. ++-+.|.++.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G-~~~v~i~~R~ 160 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHG-VQKLQVADLD 160 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CCEEEEEECC
Confidence 58999999999999999999874 6433445553
No 446
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=77.74 E-value=2.6 Score=35.51 Aligned_cols=32 Identities=22% Similarity=0.476 Sum_probs=26.6
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
+++|-|.|+ |.+|+.+++.|.++. .+|+++..
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 44 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQN-VEVFGTSR 44 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred cceEEEECCCChHHHHHHHHHHHCC-CEEEEEec
Confidence 578999999 999999999999874 67777653
No 447
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=77.74 E-value=1.7 Score=39.12 Aligned_cols=35 Identities=23% Similarity=0.239 Sum_probs=27.6
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC-CCeEEEEEecc
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAVNDP 36 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~-p~~el~~i~~~ 36 (265)
|+ ++|.|||+|..|...++.|.++ |+.+++.+-..
T Consensus 1 M~-~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~ 36 (452)
T 3oc4_A 1 MS-LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQ 36 (452)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSS
T ss_pred CC-CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECC
Confidence 54 6999999999999999988864 67888777443
No 448
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=77.68 E-value=1.8 Score=36.09 Aligned_cols=29 Identities=24% Similarity=0.325 Sum_probs=24.9
Q ss_pred EEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 5 KIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 5 ~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
||-|.|+ |++|+.+++.|. + +.+++++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-g~~V~~~~r 31 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-VGNLIALDV 31 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-TSEEEEECT
T ss_pred eEEEECCCCHHHHHHHHHhh-c-CCeEEEecc
Confidence 7999999 999999999998 5 578777653
No 449
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=77.58 E-value=2.4 Score=38.86 Aligned_cols=25 Identities=32% Similarity=0.381 Sum_probs=18.6
Q ss_pred CCccEEEEEccChh--HHHHHHHHHcC
Q 024629 1 MGKVKIGINGFGRI--GRLVARVILQR 25 (265)
Q Consensus 1 m~~~~V~IiG~G~~--G~~l~r~L~~~ 25 (265)
|+++||+|+|+|.+ |..++..|...
T Consensus 1 m~~~KIaVIGAGsVg~g~ala~~La~~ 27 (480)
T 1obb_A 1 MPSVKIGIIGAGSAVFSLRLVSDLCKT 27 (480)
T ss_dssp -CCCEEEEETTTCHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHhc
Confidence 77789999999886 67667777643
No 450
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=77.52 E-value=2 Score=36.39 Aligned_cols=32 Identities=19% Similarity=0.218 Sum_probs=25.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
+.+|.|||+|..|...+..|.++ +++++.+-.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~ 36 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMR-GLSFRFVDP 36 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEES
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeC
Confidence 47899999999999999988876 466665543
No 451
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=77.49 E-value=2.4 Score=35.47 Aligned_cols=31 Identities=19% Similarity=0.375 Sum_probs=25.5
Q ss_pred EEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 5 KIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 5 ~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
||-|.|+ |.+|+.+++.|.++...+++++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 32 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDN 32 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEcc
Confidence 5889999 999999999999875366776654
No 452
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=77.46 E-value=3.6 Score=36.48 Aligned_cols=30 Identities=17% Similarity=0.246 Sum_probs=24.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCe-EEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~-el~~i~ 34 (265)
-+|.|+|+|.+|...+.++.... . +++++.
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 245 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAG-ASKVILSE 245 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 47999999999999998887664 5 666654
No 453
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=77.42 E-value=1.7 Score=39.02 Aligned_cols=31 Identities=32% Similarity=0.781 Sum_probs=26.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
.+|.|+|+|++|+.+++.|.++. .+++.|-.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g-~~vvvId~ 35 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSG-VKMVVLDH 35 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHHCC-CCEEEEEC
Confidence 57999999999999999999873 77777754
No 454
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=77.41 E-value=2.5 Score=36.26 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=24.6
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+||+|+|+ |.+|..++..|...+.+.-+.+.|.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di 34 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGR 34 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC
Confidence 38999999 9999999999987654332333444
No 455
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=77.33 E-value=3.4 Score=33.40 Aligned_cols=31 Identities=16% Similarity=0.354 Sum_probs=25.8
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
.+|-|.|+ |.+|+.+++.|.++. .+++.+..
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g-~~V~~~~r 33 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAG-HTVIGIDR 33 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 47999999 999999999999874 67766643
No 456
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=77.32 E-value=1.6 Score=39.59 Aligned_cols=36 Identities=22% Similarity=0.218 Sum_probs=28.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHc-C-C----CeEEEEEecc
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQ-R-D----DVELVAVNDP 36 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~-~-p----~~el~~i~~~ 36 (265)
|++.+|.|||+|..|...+..|.+ + | +++++-+-..
T Consensus 1 m~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~ 42 (456)
T 1lqt_A 1 MRPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEML 42 (456)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESS
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecC
Confidence 777899999999999999998877 4 3 6887766543
No 457
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=77.28 E-value=2.4 Score=36.62 Aligned_cols=31 Identities=23% Similarity=0.385 Sum_probs=26.1
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
++|-|.|+ |.+|+.+++.|.++. .+++.+..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG-YEVHGIKR 33 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEEC
Confidence 58999999 999999999998874 67776643
No 458
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=77.12 E-value=3.1 Score=32.50 Aligned_cols=31 Identities=23% Similarity=0.396 Sum_probs=25.7
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
|+||-|.|+ |.+|+.+++.|. + +.+++.+..
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~-g~~V~~~~r 34 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-K-KAEVITAGR 34 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-T-TSEEEEEES
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-C-CCeEEEEec
Confidence 458999999 999999999998 6 577766643
No 459
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=77.04 E-value=1.5 Score=38.09 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=27.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
|++.+|.|||+|.+|..++..|.++ +++++.+-
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~-G~~V~l~E 34 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKY-GLKTLMIE 34 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEC
T ss_pred CccCCEEEECcCHHHHHHHHHHHHC-CCCEEEEe
Confidence 5568999999999999999999887 46665553
No 460
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=77.01 E-value=2.4 Score=37.10 Aligned_cols=31 Identities=19% Similarity=0.258 Sum_probs=26.1
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
+.+|-|.|+ |++|+.+++.|.++. .+|+++.
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G-~~V~~~~ 42 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKN-YEVCIVD 42 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCC-CeEEEEE
Confidence 579999999 999999999998874 6777764
No 461
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=76.96 E-value=2 Score=37.92 Aligned_cols=31 Identities=23% Similarity=0.234 Sum_probs=25.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeE-EEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVE-LVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~e-l~~i~ 34 (265)
..+|.|||+|.+|..++..|.++ +++ ++.+-
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~-G~~~v~v~E 35 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQA-GIGKVTLLE 35 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEEE
Confidence 58999999999999999999887 466 65553
No 462
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=76.82 E-value=2.4 Score=38.57 Aligned_cols=29 Identities=14% Similarity=0.260 Sum_probs=24.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
.+|+|+|+|.+|+.+++.+.... ++++..
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafG-a~Viv~ 276 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAG-ARVKVT 276 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEE
Confidence 68999999999999999998774 776543
No 463
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=76.58 E-value=2.8 Score=35.63 Aligned_cols=31 Identities=26% Similarity=0.444 Sum_probs=25.9
Q ss_pred EEEEEcc-ChhHHHHHHHHHcC--CC---eEEEEEec
Q 024629 5 KIGINGF-GRIGRLVARVILQR--DD---VELVAVND 35 (265)
Q Consensus 5 ~V~IiG~-G~~G~~l~r~L~~~--p~---~el~~i~~ 35 (265)
||-|.|+ |.+|+.+++.|.++ ++ .+++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r 38 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS 38 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEEC
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEEC
Confidence 7999999 99999999999874 35 78877754
No 464
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=76.58 E-value=1.6 Score=37.66 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=26.6
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
|...-|.|||+|..|..++..|.++. ++++.+
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G-~~V~v~ 33 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYG-LKTLMI 33 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCC-CcEEEE
Confidence 55678999999999999999998874 776555
No 465
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=76.56 E-value=2.5 Score=38.24 Aligned_cols=32 Identities=16% Similarity=0.287 Sum_probs=26.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
-.+|+|+|+|.+|+.+++.|.... ++++. .++
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~G-a~Viv-~D~ 242 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGFG-ARVVV-TEV 242 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEEE-ECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCC-CEEEE-ECC
Confidence 368999999999999999998874 77554 444
No 466
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=76.50 E-value=2.6 Score=37.07 Aligned_cols=30 Identities=20% Similarity=0.124 Sum_probs=25.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
.++|.|||+|.+|..++..|.++ +++++.+
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~ 52 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQS-GIDCDVY 52 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCEEEE
Confidence 58999999999999999999987 4776555
No 467
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=76.46 E-value=2.5 Score=37.90 Aligned_cols=33 Identities=15% Similarity=0.035 Sum_probs=25.8
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCC-eEEEEEe
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDD-VELVAVN 34 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~-~el~~i~ 34 (265)
||.+|+|||+|.+|...+..|.+++. .+++.+-
T Consensus 1 m~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlE 34 (477)
T 3nks_A 1 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVE 34 (477)
T ss_dssp -CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEEC
T ss_pred CCceEEEECCcHHHHHHHHHHHhCCCCCcEEEEe
Confidence 14799999999999999999998752 2666553
No 468
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=76.40 E-value=3.7 Score=36.09 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=27.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
..||+|+|.|.+|+.+++.+.+. +++++.+..
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~-G~~vi~~d~ 45 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEM-GYKIAVLDP 45 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeC
Confidence 35899999999999999999977 588888754
No 469
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=76.38 E-value=1.4 Score=37.66 Aligned_cols=30 Identities=20% Similarity=0.352 Sum_probs=25.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
-+|.|+|+|.+|...+.++.... .+++++.
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~ 173 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNAG-YVVDLVS 173 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEE
Confidence 47999999999999998877664 6888887
No 470
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=76.32 E-value=2.3 Score=35.55 Aligned_cols=31 Identities=16% Similarity=0.131 Sum_probs=25.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
+.+|.|||+|..|...+..|.++ +++++.+-
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie 45 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-MLKTLVIG 45 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEE
T ss_pred ccCEEEECccHHHHHHHHHHHHC-CCcEEEEe
Confidence 47999999999999999999887 46765553
No 471
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=76.32 E-value=3.1 Score=35.56 Aligned_cols=33 Identities=18% Similarity=0.357 Sum_probs=24.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
..||.|+|+|-+|.+++..|.... +.=+.+.|.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aG-VG~i~lvD~ 68 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCG-IGKLLLFDY 68 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcC-CCEEEEECC
Confidence 469999999999999999988753 433344443
No 472
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=76.30 E-value=4.3 Score=35.08 Aligned_cols=31 Identities=16% Similarity=0.247 Sum_probs=23.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCe-EEEEEec
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVND 35 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~-el~~i~~ 35 (265)
-+|.|+|+|.+|...+.++... +. +++++..
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~ 199 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHL-GAGRIFAVGS 199 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCSSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCcEEEEECC
Confidence 4689999999999999887765 45 5666543
No 473
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=76.15 E-value=2.8 Score=37.01 Aligned_cols=32 Identities=19% Similarity=0.494 Sum_probs=27.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
-.+|+|+|+|.+|..+++.|.+.. .+++ +.|+
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~G-akVv-v~D~ 204 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTEG-AKLV-VTDV 204 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred cCEEEEECchHHHHHHHHHHHHCC-CEEE-EEcC
Confidence 368999999999999999999884 7877 7765
No 474
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=76.10 E-value=1.5 Score=36.91 Aligned_cols=31 Identities=23% Similarity=0.220 Sum_probs=24.9
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 2 ~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
++.+|.|||+|..|...+..|.++ +++++.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~li 34 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARA-NLQPVLI 34 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT-TCCCEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC-CCcEEEE
Confidence 357899999999999999999876 3555444
No 475
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=75.84 E-value=2.1 Score=38.24 Aligned_cols=32 Identities=34% Similarity=0.521 Sum_probs=26.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
+.+|.|||+|.+|..++..|.++. ++++-+-.
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G-~~V~viE~ 53 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHD-VDVTVYTD 53 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCEEEECCcHHHHHHHHHHHHCC-CeEEEEcC
Confidence 368999999999999999999884 77766644
No 476
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=75.81 E-value=1.9 Score=39.29 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=26.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcC--CCeEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQR--DDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~--p~~el~~i~~ 35 (265)
+.+|.|||+|..|...+..|.+. |+.+++-+-.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~ 69 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQ 69 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEEC
Confidence 47999999999999999988865 4577766644
No 477
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=75.76 E-value=2.3 Score=37.98 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=27.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcC-CCeEEEEEecc
Q 024629 3 KVKIGINGFGRIGRLVARVILQR-DDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~-p~~el~~i~~~ 36 (265)
+.+|.|||+|..|...+..|.+. ++.+++-+...
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~ 36 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDR 36 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSS
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCC
Confidence 47999999999999999988873 56888777543
No 478
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=75.75 E-value=2.1 Score=39.30 Aligned_cols=31 Identities=16% Similarity=0.248 Sum_probs=25.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
-.+|+|+|+|.+|+.+++.+... ++++.+..
T Consensus 257 GktVgIIG~G~IG~~vA~~l~~~-G~~Viv~d 287 (479)
T 1v8b_A 257 GKIVVICGYGDVGKGCASSMKGL-GARVYITE 287 (479)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHH-TCEEEEEC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-cCEEEEEe
Confidence 36899999999999999999877 47766553
No 479
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=75.71 E-value=4.3 Score=34.14 Aligned_cols=32 Identities=16% Similarity=0.274 Sum_probs=24.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
.++.|+|+|-+|+.++..|.... ++-+.|.++
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G-~~~i~v~nR 151 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSG-FEKLKIYAR 151 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTT-CCCEEEECS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CCEEEEEeC
Confidence 47999999999999999998874 433344445
No 480
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=75.68 E-value=2.3 Score=41.11 Aligned_cols=30 Identities=20% Similarity=0.294 Sum_probs=24.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
+.||+|+|+|.+|..++..+.+. +++++..
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~a-G~~V~l~ 341 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILS-NYPVILK 341 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT-TCCEEEE
T ss_pred CcEEEEEcCCHhhHHHHHHHHhC-CCEEEEE
Confidence 46899999999999999999877 4665554
No 481
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=75.58 E-value=3.1 Score=34.98 Aligned_cols=29 Identities=24% Similarity=0.481 Sum_probs=24.9
Q ss_pred EEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe
Q 024629 5 KIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 5 ~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
||-|.|+ |.+|+.+++.|.++. .+++++.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 31 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARG-LEVAVLD 31 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred EEEEEeCCcHHHHHHHHHHHHCC-CEEEEEE
Confidence 7999999 999999999999874 6777664
No 482
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=75.36 E-value=2.3 Score=36.45 Aligned_cols=35 Identities=20% Similarity=0.168 Sum_probs=25.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
+.||+|+|+|.+|..++..|.....+.-+.+.|..
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~ 48 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLS 48 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 47999999999999998888765433333444543
No 483
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=75.29 E-value=3.1 Score=36.63 Aligned_cols=32 Identities=22% Similarity=0.434 Sum_probs=27.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
.+|+|.|+|.+|+.+++.|... +++|+ +.|..
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~-GakVv-vsD~~ 207 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEA-GAQLL-VADTD 207 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEE-EEeCC
Confidence 6899999999999999999887 58888 77763
No 484
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=75.27 E-value=2.5 Score=35.13 Aligned_cols=31 Identities=26% Similarity=0.222 Sum_probs=25.0
Q ss_pred EEEEEccChhHHHHHHHHHcCCCeEEEEEeccC
Q 024629 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 5 ~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~~~ 37 (265)
||+|+|+|.+|+.+++.|.+.. +++ .+.++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g-~~v-~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG-LEV-WVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCE-EEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCC-CEE-EEEECC
Confidence 8999999999999999998875 454 455553
No 485
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=74.97 E-value=2.6 Score=35.87 Aligned_cols=33 Identities=21% Similarity=0.302 Sum_probs=26.6
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+.+|-|.|+ |.+|+.+++.|.++. .+++++...
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~~~G-~~V~~~~r~ 38 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLLERG-YTVRATVRD 38 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC-CEEEEEECC
Confidence 468999999 999999999998874 677766543
No 486
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=74.96 E-value=2.6 Score=36.97 Aligned_cols=30 Identities=20% Similarity=0.264 Sum_probs=23.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCe-EEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~-el~~i~ 34 (265)
-+|.|+|+|.+|...+.++.... . +++++.
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 214 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAG-ATTVILST 214 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 47999999999999998877664 5 565553
No 487
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=74.68 E-value=5.6 Score=33.75 Aligned_cols=28 Identities=18% Similarity=0.418 Sum_probs=21.2
Q ss_pred cEEEEEccCh-hHHHHHHHHHcCC-CeEEE
Q 024629 4 VKIGINGFGR-IGRLVARVILQRD-DVELV 31 (265)
Q Consensus 4 ~~V~IiG~G~-~G~~l~r~L~~~p-~~el~ 31 (265)
.++.|+|+|. +|+-++++|.+.. +..+.
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVt 188 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVT 188 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEE
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEE
Confidence 5899999965 6999999888763 45444
No 488
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=74.61 E-value=3.2 Score=39.05 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=27.1
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
|+..+|.|||+|.+|..++..|.++ +++++-+-
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~-G~~V~LiE 53 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKL-GHDVTIYE 53 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcC-CCCEEEEc
Confidence 4457999999999999999999887 47766653
No 489
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=74.39 E-value=2.4 Score=39.40 Aligned_cols=33 Identities=15% Similarity=0.127 Sum_probs=26.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
+.+|.|||+|..|..++..|.++.+++++.+-.
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~ 40 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDK 40 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEES
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEEC
Confidence 368999999999999999998334567666644
No 490
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=74.38 E-value=3.1 Score=35.53 Aligned_cols=31 Identities=19% Similarity=0.374 Sum_probs=25.6
Q ss_pred EEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024629 5 KIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 5 ~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~~ 36 (265)
+|.|+|+ |.+|...+.++.... .+++++...
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~ 183 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTGK 183 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESC
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 7999999 999999999887764 677777654
No 491
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=74.36 E-value=2.7 Score=38.23 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=28.6
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCC--CeEEEEEecc
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRD--DVELVAVNDP 36 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p--~~el~~i~~~ 36 (265)
+++|-|.|+ |++|+++++.|.+++ +.+|+.+...
T Consensus 73 ~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~ 109 (478)
T 4dqv_A 73 LRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRA 109 (478)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECC
Confidence 579999999 999999999998774 4688887654
No 492
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=74.26 E-value=2.6 Score=37.49 Aligned_cols=33 Identities=27% Similarity=0.190 Sum_probs=26.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcC-----CCeEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQR-----DDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~-----p~~el~~i~~ 35 (265)
+.+|.|||+|.+|...+..|.+. |+.+++.+-.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa 42 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEA 42 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECS
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEEC
Confidence 47999999999999999998865 3477766643
No 493
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=74.24 E-value=2.1 Score=36.10 Aligned_cols=32 Identities=22% Similarity=0.172 Sum_probs=26.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
+.+|.|||+|..|...+..|.++ +++++.+-.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~ 38 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-QASVKIIES 38 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-CCCEEEEEc
Confidence 46899999999999999998876 477666643
No 494
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=73.96 E-value=3.2 Score=39.59 Aligned_cols=32 Identities=16% Similarity=0.265 Sum_probs=27.2
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024629 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~~ 35 (265)
+++|-|.|+ |.+|+.+++.|.++. .+|+++..
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~~G-~~V~~~~r 43 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIENG-YDCVVADN 43 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCc-CEEEEEEC
Confidence 478999999 999999999999874 67777654
No 495
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=73.92 E-value=2.5 Score=36.59 Aligned_cols=30 Identities=27% Similarity=0.392 Sum_probs=24.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i 33 (265)
+.+|.|||+|.+|..++..|.++ +.+++.+
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~-G~~V~ll 34 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKR-GEEVTVI 34 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-TCCEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEE
Confidence 46899999999999999999887 3665555
No 496
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=73.89 E-value=1.6 Score=37.83 Aligned_cols=31 Identities=19% Similarity=0.209 Sum_probs=24.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCe-EEEEEecc
Q 024629 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~p~~-el~~i~~~ 36 (265)
.++.|+|+|-+|+.+++.|.+.. + ++. |.++
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~G-a~~V~-i~nR 186 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDG-VKEIS-IFNR 186 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CSEEE-EEEC
T ss_pred CEEEEECCChHHHHHHHHHHHCC-CCEEE-EEEC
Confidence 58999999999999999999874 5 444 4444
No 497
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=73.72 E-value=3.8 Score=35.67 Aligned_cols=31 Identities=26% Similarity=0.457 Sum_probs=26.1
Q ss_pred cEEEEEcc-ChhHHHHHHHHH-cCCCeEEEEEec
Q 024629 4 VKIGINGF-GRIGRLVARVIL-QRDDVELVAVND 35 (265)
Q Consensus 4 ~~V~IiG~-G~~G~~l~r~L~-~~p~~el~~i~~ 35 (265)
|+|-|.|+ |.+|+.+++.|. ++. .+|+.+..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g-~~V~~~~r 35 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTN-HSVVIVDS 35 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCC-CEEEEEec
Confidence 48999999 999999999998 764 67777653
No 498
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=73.70 E-value=5.2 Score=32.20 Aligned_cols=33 Identities=15% Similarity=0.315 Sum_probs=26.9
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe
Q 024629 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~~~V~IiG~-G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
|+..++-|.|+ |.+|+++++.|.++. .+++.+.
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G-~~V~~~~ 34 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNG-YTVLNID 34 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTT-EEEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEe
Confidence 65678999999 999999999999884 7776654
No 499
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=73.59 E-value=3 Score=35.85 Aligned_cols=31 Identities=16% Similarity=0.104 Sum_probs=25.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024629 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~~~V~IiG~G~~G~~l~r~L~~~p~~el~~i~ 34 (265)
+.+|.|||+|..|..++..|.+. +++++-+-
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie 44 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMN-NISCRIIE 44 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEEEe
Confidence 47899999999999999988875 46765554
No 500
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=73.49 E-value=2.7 Score=36.90 Aligned_cols=31 Identities=23% Similarity=0.268 Sum_probs=25.7
Q ss_pred cEEEEEccChhHHHHHHHHHcC-CCeEEEEEe
Q 024629 4 VKIGINGFGRIGRLVARVILQR-DDVELVAVN 34 (265)
Q Consensus 4 ~~V~IiG~G~~G~~l~r~L~~~-p~~el~~i~ 34 (265)
.||.|||+|..|...++.|.++ ++++++-|-
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie 34 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIE 34 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEe
Confidence 5999999999999999887654 678877774
Done!