Query 024630
Match_columns 265
No_of_seqs 209 out of 646
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 11:39:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024630.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024630hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gwr_A Putative calcium/calmod 100.0 6.8E-29 2.3E-33 205.3 16.5 120 143-263 7-128 (144)
2 3cnx_A Uncharacterized protein 99.9 2.2E-27 7.6E-32 203.3 13.1 124 140-264 8-157 (170)
3 3f7s_A Uncharacterized NTF2-li 99.9 3.3E-23 1.1E-27 166.7 17.2 121 140-262 4-127 (142)
4 2ux0_A Calcium-calmodulin depe 99.9 1.1E-21 3.7E-26 158.0 14.8 119 143-263 12-137 (143)
5 3b7c_A Uncharacterized protein 99.9 3.2E-21 1.1E-25 153.0 16.6 117 142-261 3-121 (122)
6 3soy_A NTF2-like superfamily p 99.9 2E-21 6.8E-26 160.3 11.0 122 141-263 7-136 (145)
7 3hx8_A MLR2180 protein, putati 99.8 7E-20 2.4E-24 142.6 17.3 120 140-263 2-126 (129)
8 3h51_A Putative calcium/calmod 99.8 1.5E-19 5E-24 148.6 16.4 121 139-263 15-140 (156)
9 2rcd_A Uncharacterized protein 99.8 7.9E-20 2.7E-24 146.0 14.2 115 143-264 13-128 (129)
10 3bb9_A Putative orphan protein 99.8 7.6E-20 2.6E-24 149.0 14.0 116 142-261 28-148 (148)
11 4i4k_A Uncharacterized protein 99.8 2E-19 6.7E-24 147.2 15.0 126 135-264 10-141 (143)
12 2r4i_A Uncharacterized protein 99.8 2.7E-18 9.1E-23 133.1 14.2 117 142-264 4-123 (123)
13 2owp_A Hypothetical protein BX 99.8 1.5E-18 5.1E-23 141.2 12.6 116 142-264 9-127 (129)
14 3fsd_A NTF2-like protein of un 99.8 6.8E-18 2.3E-22 135.7 15.0 116 141-263 11-133 (134)
15 3ke7_A Putative ketosteroid is 99.8 7.2E-18 2.5E-22 138.9 15.1 120 135-262 8-129 (134)
16 2gxf_A Hypothetical protein YY 99.8 4.4E-18 1.5E-22 137.4 12.5 117 143-261 2-122 (142)
17 2f86_B Hypothetical protein K1 99.8 7.3E-18 2.5E-22 139.6 13.6 116 142-263 10-133 (143)
18 3gzr_A Uncharacterized protein 99.8 1.7E-17 5.8E-22 136.8 14.7 122 141-264 3-131 (146)
19 3d9r_A Ketosteroid isomerase-l 99.8 6E-17 2.1E-21 127.1 16.9 119 141-263 8-133 (135)
20 3rob_A Uncharacterized conserv 99.7 5.8E-17 2E-21 133.2 16.4 117 140-261 13-135 (139)
21 3cu3_A Domain of unknown funct 99.7 6.3E-17 2.2E-21 134.7 15.1 120 142-264 14-139 (172)
22 3ksp_A Calcium/calmodulin-depe 99.6 5.3E-14 1.8E-18 115.3 13.5 117 142-264 7-127 (129)
23 2chc_A Protein RV3472; hypothe 99.4 5E-12 1.7E-16 104.4 14.5 117 142-263 12-132 (170)
24 3b8l_A Uncharacterized protein 99.4 6.2E-12 2.1E-16 103.2 14.9 119 142-263 26-152 (163)
25 2rfr_A Uncharacterized protein 99.4 4.8E-12 1.6E-16 102.2 14.0 119 143-263 18-142 (155)
26 1tp6_A Hypothetical protein PA 99.3 4.6E-11 1.6E-15 96.3 13.5 113 145-262 11-126 (128)
27 2a15_A Hypothetical protein RV 99.2 1.3E-10 4.4E-15 92.1 13.5 114 142-261 5-127 (139)
28 3a76_A Gamma-hexachlorocyclohe 99.2 1.5E-10 5E-15 97.2 13.5 115 143-260 30-151 (176)
29 2rgq_A Domain of unknown funct 99.2 5.2E-10 1.8E-14 90.3 15.5 119 140-261 6-126 (144)
30 3ef8_A Putative scyalone dehyd 99.1 6E-10 2E-14 90.9 13.2 116 143-261 10-131 (150)
31 2k54_A Protein ATU0742; protei 99.1 1.4E-09 4.8E-14 84.7 13.3 106 146-259 5-110 (123)
32 3soa_A Calcium/calmodulin-depe 99.0 2.7E-09 9.3E-14 101.6 13.5 120 142-263 316-442 (444)
33 1ohp_A Steroid delta-isomerase 99.0 4.9E-09 1.7E-13 79.6 12.3 109 143-260 4-114 (125)
34 1nww_A Limonene-1,2-epoxide hy 99.0 2.1E-08 7.2E-13 80.1 16.3 113 143-261 21-135 (149)
35 1oh0_A Steroid delta-isomerase 99.0 4.9E-09 1.7E-13 81.4 12.2 111 142-260 5-118 (131)
36 4h3u_A Hypothetical protein; s 99.0 2.1E-08 7.1E-13 81.9 15.3 102 148-254 29-132 (158)
37 3dmc_A NTF2-like protein; stru 99.0 1.7E-08 5.8E-13 81.3 14.4 112 141-259 9-124 (134)
38 3ejv_A Uncharacterized protein 99.0 1.3E-08 4.5E-13 86.4 14.1 120 142-261 24-171 (179)
39 3ebt_A Uncharacterized NTF2-li 98.9 3.5E-08 1.2E-12 76.9 14.1 107 146-260 5-119 (132)
40 1tuh_A BAL32A, hypothetical pr 98.9 5.5E-08 1.9E-12 78.9 15.1 109 145-260 30-143 (156)
41 3f14_A Uncharacterized NTF2-li 98.9 2.3E-08 7.7E-13 77.6 12.2 104 148-259 4-108 (112)
42 3dm8_A Uncharacterized protein 98.8 8.2E-08 2.8E-12 77.3 14.1 109 144-260 4-121 (143)
43 3i0y_A Putative polyketide cyc 98.8 2.3E-07 7.9E-12 72.9 16.0 104 145-254 9-123 (140)
44 3fh1_A Uncharacterized NTF2-li 98.8 1.2E-07 4.2E-12 74.6 13.9 107 141-259 14-124 (129)
45 2gex_A SNOL; alpha+beta barrel 98.8 2.6E-07 9E-12 74.5 16.0 108 144-259 4-120 (152)
46 3ff2_A Uncharacterized cystati 98.8 1.4E-07 4.7E-12 73.0 13.4 105 147-258 5-113 (117)
47 2bng_A MB2760; epoxide hydrola 98.8 1.9E-07 6.6E-12 75.1 14.4 110 144-260 15-124 (149)
48 3f7x_A Putative polyketide cyc 98.8 1.6E-07 5.6E-12 76.6 14.0 109 143-259 19-138 (151)
49 3ec9_A Uncharacterized NTF2-li 98.8 3.8E-07 1.3E-11 72.2 15.5 109 143-259 11-126 (140)
50 3k0z_A Putative polyketide cyc 98.8 3.5E-07 1.2E-11 75.2 15.5 109 144-260 34-142 (159)
51 3g8z_A Protein of unknown func 98.7 3.3E-07 1.1E-11 74.3 14.9 111 144-260 20-134 (148)
52 3fgy_A Uncharacterized NTF2-li 98.7 1.7E-07 5.7E-12 73.5 12.4 109 144-260 5-119 (135)
53 1s5a_A Hypothetical protein YE 98.7 1.2E-07 4E-12 75.4 11.6 113 145-261 11-130 (150)
54 2gey_A ACLR protein; alpha+bet 98.7 5E-07 1.7E-11 73.6 15.6 107 145-260 5-119 (158)
55 3g16_A Uncharacterized protein 98.7 1.8E-07 6E-12 78.8 13.0 80 140-225 6-90 (156)
56 3blz_A NTF2-like protein of un 98.7 2.1E-07 7.1E-12 73.9 12.6 110 142-259 10-121 (128)
57 4gb5_A Uncharacterized protein 98.7 3.2E-07 1.1E-11 74.7 13.2 118 142-261 9-140 (159)
58 3h3h_A Uncharacterized snoal-l 98.6 1.8E-07 6.1E-12 73.0 9.9 103 142-259 6-117 (122)
59 1sjw_A Nogalonic acid methyl e 98.6 5.2E-07 1.8E-11 71.4 11.6 108 147-260 5-121 (144)
60 3hk4_A MLR7391 protein; NTF2-l 98.6 2.4E-06 8.2E-11 69.5 15.6 110 143-259 19-133 (136)
61 3grd_A Uncharacterized NTF2-su 98.6 1.7E-07 5.8E-12 73.5 8.2 109 146-260 6-121 (134)
62 3f8h_A Putative polyketide cyc 98.5 1.6E-06 5.5E-11 70.7 13.7 104 148-259 22-136 (150)
63 3en8_A Uncharacterized NTF-2 l 98.5 2E-06 6.8E-11 68.6 13.8 103 144-260 5-108 (128)
64 3fka_A Uncharacterized NTF-2 l 98.5 8E-07 2.7E-11 70.6 11.0 104 142-258 7-115 (120)
65 2f99_A Aklanonic acid methyl e 98.5 1.4E-06 4.8E-11 70.7 12.5 111 143-259 10-129 (153)
66 3kkg_A Putative snoal-like pol 98.5 2.5E-06 8.4E-11 68.2 13.0 109 145-260 10-129 (146)
67 3duk_A NTF2-like protein of un 98.5 2.3E-06 7.7E-11 68.5 12.2 108 140-257 8-118 (125)
68 3f9s_A Putative polyketide cyc 98.5 5E-06 1.7E-10 66.2 14.1 110 144-260 6-128 (146)
69 1z1s_A Hypothetical protein PA 98.4 8.9E-07 3E-11 72.7 9.6 108 144-260 23-139 (163)
70 3rga_A Epoxide hydrolase; NTF2 98.4 1.6E-06 5.3E-11 78.5 11.8 112 142-260 4-120 (283)
71 3f40_A Uncharacterized NTF2-li 98.4 6.3E-06 2.2E-10 64.5 13.4 99 144-260 6-104 (114)
72 3ehc_A Snoal-like polyketide c 98.4 4.2E-06 1.4E-10 65.3 11.2 105 145-260 4-116 (128)
73 3rga_A Epoxide hydrolase; NTF2 98.3 7E-06 2.4E-10 74.2 13.9 111 142-259 136-268 (283)
74 3g0k_A Putative membrane prote 98.3 5.4E-06 1.8E-10 67.8 11.7 103 144-258 27-130 (148)
75 3mso_A Steroid delta-isomerase 98.3 4.2E-06 1.4E-10 68.2 10.3 99 143-251 8-108 (143)
76 3er7_A Uncharacterized NTF2-li 98.2 2.7E-06 9.3E-11 69.2 7.8 109 148-263 6-121 (131)
77 3dxo_A Uncharacterized snoal-l 98.2 3.6E-05 1.2E-09 60.4 13.8 106 145-260 4-114 (121)
78 2b1x_B Naphthalene dioxygenase 98.2 7E-05 2.4E-09 62.2 15.3 119 141-261 10-157 (172)
79 3flj_A Uncharacterized protein 98.1 6E-05 2E-09 63.3 13.0 93 147-251 21-115 (155)
80 3f8x_A Putative delta-5-3-keto 98.1 3.1E-05 1.1E-09 64.0 11.0 97 143-251 19-117 (148)
81 3lyg_A NTF2-like protein of un 98.1 4.4E-05 1.5E-09 61.4 11.2 98 146-251 4-102 (120)
82 2gbw_B Biphenyl 2,3-dioxygenas 98.0 0.00024 8.3E-09 59.4 16.2 118 142-261 12-159 (174)
83 1e52_A Excinuclease ABC subuni 98.0 1.9E-06 6.7E-11 62.5 2.4 39 102-140 19-57 (63)
84 1idp_A Scytalone dehydratase; 97.9 3.3E-05 1.1E-09 65.8 8.0 116 142-260 15-149 (172)
85 3eby_A Beta subunit of A putat 97.8 0.00015 5E-09 60.1 11.2 120 141-261 11-149 (163)
86 3e99_A Benzoate 1,2-dioxygenas 97.6 0.0033 1.1E-07 52.6 15.3 119 141-261 5-149 (164)
87 1uli_B Biphenyl dioxygenase sm 97.6 0.0031 1.1E-07 53.5 15.3 118 142-261 22-172 (187)
88 3hzp_A NTF2-like protein of un 97.5 0.00086 2.9E-08 54.8 10.5 110 143-263 5-122 (131)
89 1wql_B Ethylbenzene dioxygenas 97.4 0.0061 2.1E-07 51.6 15.7 118 142-261 21-171 (186)
90 3jum_A Phenazine biosynthesis 97.4 0.00097 3.3E-08 57.5 10.4 107 144-254 41-156 (185)
91 3mg1_A OCP, orange carotenoid 97.2 0.0014 4.9E-08 60.6 9.3 100 147-253 195-298 (323)
92 3ff0_A Phenazine biosynthesis 96.9 0.0036 1.2E-07 52.9 8.5 102 147-252 22-132 (163)
93 2bmo_B Oxygenase-beta NBDO; ni 96.9 0.03 1E-06 48.0 14.2 121 141-262 29-180 (194)
94 3gzx_B Biphenyl dioxygenase su 96.8 0.053 1.8E-06 46.1 15.6 119 141-261 20-171 (186)
95 2d7d_A Uvrabc system protein B 96.5 0.00093 3.2E-08 67.0 2.4 39 103-141 622-660 (661)
96 3ujm_A Rasputin; NTF2-like fol 96.3 0.081 2.8E-06 41.8 12.5 106 147-258 8-115 (120)
97 1c4o_A DNA nucleotide excision 96.1 0.00095 3.2E-08 66.9 0.0 41 101-141 605-645 (664)
98 3nv0_B NTF2-related export pro 95.7 0.17 5.8E-06 42.0 12.1 102 147-259 38-149 (154)
99 1jkg_A P15; NTF2-like domain, 95.6 0.17 5.9E-06 40.9 11.8 109 141-258 12-131 (140)
100 1zo2_A NTF2, nuclear transport 95.3 0.49 1.7E-05 37.7 13.1 109 141-258 10-122 (129)
101 1gy6_A Nuclear transport facto 95.2 0.3 1E-05 38.8 11.5 107 143-258 8-117 (127)
102 2qiy_A UBP3-associated protein 94.4 0.62 2.1E-05 38.1 12.0 112 141-258 10-142 (154)
103 1gy7_A Nuclear transport facto 94.0 0.84 2.9E-05 36.1 11.5 105 145-258 8-117 (125)
104 2jq5_A SEC-C motif; structural 93.9 1.8 6.1E-05 34.9 13.3 97 145-257 27-123 (128)
105 3q90_A RAS GTPase-activating p 92.8 1.3 4.4E-05 35.7 11.0 105 146-258 13-130 (140)
106 2i9w_A Hypothetical protein; c 88.9 1.8 6.2E-05 37.1 8.5 97 145-256 52-154 (184)
107 1vqq_A Saupbp2A, penicillin-bi 87.4 3.3 0.00011 41.3 10.7 98 148-256 6-104 (646)
108 1jkg_B TAP; NTF2-like domain, 87.2 3.9 0.00013 36.1 10.0 56 143-198 15-100 (250)
109 3gzb_A Putative snoal-like pol 86.4 6.7 0.00023 32.3 10.1 83 149-235 25-107 (154)
110 3k7c_A Putative NTF2-like tran 86.3 5 0.00017 31.8 9.1 94 148-256 11-112 (114)
111 3pxg_A Negative regulator of g 83.7 0.28 9.5E-06 46.7 0.8 48 103-154 397-444 (468)
112 2fzt_A Hypothetical protein TM 82.2 2.7 9.2E-05 31.2 5.4 42 107-148 2-47 (79)
113 3ecf_A NTF2-like protein; stru 80.8 20 0.00068 28.7 12.3 97 142-252 3-101 (130)
114 1gp8_A Protein (scaffolding pr 79.1 1.7 5.7E-05 28.4 3.0 33 106-138 7-39 (40)
115 2cw9_A Translocase of inner mi 66.5 57 0.0019 27.3 12.2 46 126-172 37-88 (194)
116 3qk9_A Mitochondrial import in 66.2 47 0.0016 28.8 10.2 20 153-172 92-111 (222)
117 2imj_A Hypothetical protein DU 65.9 58 0.002 27.2 14.2 112 141-261 15-127 (166)
118 1of5_A MRNA export factor MEX6 56.6 72 0.0024 27.7 9.6 30 142-172 10-39 (221)
119 3kxe_C Antitoxin protein PARD- 55.7 8.9 0.00031 28.8 3.2 49 110-159 12-61 (88)
120 2vxg_A LD41624, GE-1, CG6181-P 53.3 8.6 0.0003 31.3 2.9 39 111-173 2-40 (139)
121 3hho_A CO-chaperone protein HS 53.2 20 0.00068 29.7 5.3 60 103-168 92-151 (174)
122 3ub1_A ORF13-like protein; NTF 52.2 1.3E+02 0.0043 26.7 14.1 92 142-257 153-245 (261)
123 1gp8_A Protein (scaffolding pr 50.0 16 0.00055 23.7 3.2 27 142-168 6-32 (40)
124 1fpo_A HSC20, chaperone protei 47.5 29 0.00099 28.7 5.4 58 104-168 90-147 (171)
125 4b0z_A RPN12, 26S proteasome r 45.9 43 0.0015 28.7 6.5 54 115-168 13-78 (229)
126 1q40_B MEX67, mRNA export fact 37.7 1E+02 0.0035 26.6 7.5 31 142-173 13-43 (219)
127 2qgu_A Probable signal peptide 37.5 1E+02 0.0036 26.0 7.5 48 206-258 119-166 (211)
128 3bvo_A CO-chaperone protein HS 36.9 19 0.00065 30.8 2.7 54 105-168 133-186 (207)
129 3uo3_A J-type CO-chaperone JAC 33.6 23 0.0008 29.6 2.7 55 104-168 102-156 (181)
130 1yzm_A FYVE-finger-containing 30.7 28 0.00094 23.8 2.1 39 102-140 4-42 (51)
131 4hyz_A Uncharacterized protein 28.5 1.9E+02 0.0066 21.9 12.3 57 136-202 5-62 (114)
132 3v1a_A Computational design, M 28.2 33 0.0011 23.2 2.1 37 104-140 5-41 (48)
133 4b6x_A AVRRPS4, avirulence pro 27.9 40 0.0014 25.3 2.7 37 103-139 32-68 (90)
134 3he5_B Synzip2; heterodimeric 27.2 25 0.00087 23.4 1.4 13 129-141 34-46 (52)
135 1ews_A RK-1 defensin, alpha-de 25.7 29 0.00098 21.0 1.3 21 23-52 1-21 (32)
136 2ra1_A Surface layer protein; 25.4 1.2E+02 0.004 28.9 6.1 29 103-131 97-125 (412)
137 3nnf_A CURA; non-HAEM Fe(II)/a 24.8 13 0.00046 34.5 -0.4 72 66-138 10-88 (344)
138 3ra3_B P2F; coiled coil domain 24.5 51 0.0017 19.4 2.2 23 108-130 4-26 (28)
139 3uo3_A J-type CO-chaperone JAC 23.5 45 0.0015 27.8 2.6 27 106-132 131-157 (181)
140 2b5u_A Colicin E3; high resolu 20.0 13 0.00043 36.6 -1.7 19 140-158 352-370 (551)
No 1
>3gwr_A Putative calcium/calmodulin-dependent protein KIN II association domain; YP_315894.1; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259}
Probab=99.96 E-value=6.8e-29 Score=205.34 Aligned_cols=120 Identities=27% Similarity=0.486 Sum_probs=109.4
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEE
Q 024630 143 KTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVG 222 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA 222 (265)
-+.+.+++++||+||++||+++|+++|++|+.++|++|++..+.|+++|+++|+.+|++.. ++++++.++++.+.||+|
T Consensus 7 ~~~~~~~~~af~~A~~~gD~da~~al~a~d~~v~~v~p~g~~l~G~~ai~~~w~~~f~~~~-~~~i~~~~v~v~~~gd~A 85 (144)
T 3gwr_A 7 FPTPEAAEDAFYAAFEARSLDDMMAVWARDDHVACIHPLAAPLNGRAAVAAGWRSMFGAAG-RFRLQVKAVHEIRQADHV 85 (144)
T ss_dssp CSSHHHHHHHHHHHHHHTCHHHHHHHBCSSSCCEEECTTCCCEESHHHHHHHHHHHHHHHC-CEEEEEEEEEEEECSSEE
T ss_pred cCCHHHHHHHHHHHHHcCCHHHHHhhccCCCCEEEECCCCCCcccHHHHHHHHHHHHcCCC-cEEEEEEEEEEEecCCEE
Confidence 4568899999999999999999999999998899999999999999999999999998754 589999999999999999
Q ss_pred EEEEEEEEecC--CcceeeEEEEEEEEEeCCeEEEEEEeeCCC
Q 024630 223 YVTCIEFVRTK--GTSWGGQFVTNVFEKLDGQWFICIHHASPV 263 (265)
Q Consensus 223 ~Vt~~e~v~~~--G~~~g~~raTnVfrR~dG~WrIVhhHaSp~ 263 (265)
++++.+.+... |+...+.++|+||||++|+|||+|||+||+
T Consensus 86 ~v~~~e~~~~~~~~g~~~~~r~T~V~~r~~g~WrivhhH~S~~ 128 (144)
T 3gwr_A 86 IRIVDEFLTIGDETAPRPAILATNVYRREADGWRMVLHHASPL 128 (144)
T ss_dssp EEEEEEEEEETTCSSCCCCEEEEEEEEECSSSEEEEEEEEEEC
T ss_pred EEEEEEEEEecCCCCceeeEEEEEEEEEECCEEEEEEEecCCC
Confidence 99999999852 222367899999999999999999999997
No 2
>3cnx_A Uncharacterized protein; putative dehydratase, NTF2-like protein, structural genomics center for structural genomics, JCSG; HET: MSE PGE PG6; 2.10A {Streptomyces avermitilis} SCOP: d.17.4.17
Probab=99.95 E-value=2.2e-27 Score=203.30 Aligned_cols=124 Identities=35% Similarity=0.620 Sum_probs=109.6
Q ss_pred ccchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCc---------------eEEecCCCCCccCHHHHHHHHHHHHhccCc
Q 024630 140 EDSKTSVLAANARFYDSFKNGDLATMQGLWARGDN---------------VCCVHPGASGISGYDPVMESWEVVWMNYEF 204 (265)
Q Consensus 140 ~Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~---------------V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~ 204 (265)
...+++|++++++||+||++||+++|+++|++|+. ++|+||++.++.|+++|+++|+.+|++.++
T Consensus 8 ~~d~~~I~~~~~~~~~A~~~gD~~~l~alwa~d~~~~~~~~~~~~~~~~~v~~v~Pg~~~l~G~~~I~~~~~~~f~~~~~ 87 (170)
T 3cnx_A 8 DTDVEQVGLANTAFYEAMERGDFETLSSLWLTPADLGVDEEYHDPADAGVVSCVHPGWPVLSGRGEVLRSYALIMANTEY 87 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHBCCHHHHTC------CCCTTCCEEECTTCCEEEHHHHHHHHHHHHHHTCSE
T ss_pred cchHHHHHHHHHHHHHHHHcCCHHHHHHhhcCCcccccccccccccccccEEEEcCCCccccCHHHHHHHHHHHHccCCe
Confidence 45678999999999999999999999999999976 799999999999999999999999987643
Q ss_pred ceEEEEEeEEEEEeCCEEEEEEEEEEecC----------Cccee-eEEEEEEEEEeCCeEEEEEEeeCCCC
Q 024630 205 PLAIELKNVRVHVRGNVGYVTCIEFVRTK----------GTSWG-GQFVTNVFEKLDGQWFICIHHASPVD 264 (265)
Q Consensus 205 pl~iel~dv~V~v~GDvA~Vt~~e~v~~~----------G~~~g-~~raTnVfrR~dG~WrIVhhHaSp~~ 264 (265)
+++++.+++|.+.||+|++++.+.+... |...+ +.++|+||||++|+|||+|||+||+.
T Consensus 88 -~~~~~~dv~v~~~gD~A~v~~~~~~~~~~~~~~g~~~~g~~~~~~~raT~Vfrr~~ggWriv~hH~Sp~~ 157 (170)
T 3cnx_A 88 -IQFFLTDVHVSVTGDTALVTCTENILSGGPPPDDSDELGPLVGQLVVATNVFRRTPDGWKLWSHHASPVL 157 (170)
T ss_dssp -EEEEEEEEEEEEETTEEEEEEEEEEEEEC---------CCCEEEEEEEEEEEECCTTCCEEEEEEEEECC
T ss_pred -eEEEEEEEEEEEeCCEEEEEEEEEEeccCCccccccccCccccceEEEEEEEEEECCEEEEEEEecCCCC
Confidence 8999999999999999999999988742 12223 37899999999999999999999873
No 3
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=99.91 E-value=3.3e-23 Score=166.71 Aligned_cols=121 Identities=16% Similarity=0.284 Sum_probs=104.4
Q ss_pred ccchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCC-CccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEe
Q 024630 140 EDSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGAS-GISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVR 218 (265)
Q Consensus 140 ~Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~-~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~ 218 (265)
.+.+++|.++.++|++|+++||+++++++|++| +++++|+++ .+.|+++++++|+..|+..+.++.+++.+++|.+.
T Consensus 4 ~~~~~~I~~l~~~~~~A~~~~D~~~~~~l~a~D--~v~~~~~~~~~~~G~~air~~~~~~~~~~~~~~~~~~~~~~v~~~ 81 (142)
T 3f7s_A 4 TAAESEIRQLIERWMQAVRDRDIPGIIAPYADD--IVAFDAIQALQFKGKSAYTAHWEMCMGMCTGPMVFELAQLTVHAA 81 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHTTEEEE--EEEECSSSSSCEESHHHHHHHHHHHHHTCCSCEEEEEEEEEEEEE
T ss_pred hhhHHHHHHHHHHHHHHHHcCCHHHHHhhcCCC--EEEecCCCCccccCHHHHHHHHHHHHHhCCCceEEEEeeeEEEEc
Confidence 456889999999999999999999999999986 777777553 45899999999999998755568999999999999
Q ss_pred CCEEEEEEEEEEecC--CcceeeEEEEEEEEEeCCeEEEEEEeeCC
Q 024630 219 GNVGYVTCIEFVRTK--GTSWGGQFVTNVFEKLDGQWFICIHHASP 262 (265)
Q Consensus 219 GDvA~Vt~~e~v~~~--G~~~g~~raTnVfrR~dG~WrIVhhHaSp 262 (265)
||+|++++...+... ++.....++|+||+|++|+|||+|+|.|.
T Consensus 82 gd~A~~~~~~~~~~~~~~g~~~~~r~T~v~~r~~g~W~ivh~H~S~ 127 (142)
T 3f7s_A 82 GDLALAHWLNRCGPGDDESQCGFMRATVGYRRQGGQWQVIHEHWSA 127 (142)
T ss_dssp TTEEEEEEEEEEEESSCGGGCEEEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCEEEEEEEEEEeeecCCCcceeeEEEEEEEEeCCEEEEEEEeecc
Confidence 999999998777641 22456789999999999999999999993
No 4
>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*
Probab=99.87 E-value=1.1e-21 Score=157.99 Aligned_cols=119 Identities=19% Similarity=0.289 Sum_probs=97.6
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecC--CCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCC
Q 024630 143 KTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHP--GASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGN 220 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhP--gg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GD 220 (265)
+.+|.+++++|++|+++||+++|+++|++| +++++| .|..+.|+++++++|+..++....++.+++.+++|.+.||
T Consensus 12 ~~~I~~l~~~~~~A~~~~D~~~~~~l~a~d--~~~~~~~~~g~~~~G~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~gd 89 (143)
T 2ux0_A 12 KQEIIKITEQLIEAINNGDFEAYTKICDPG--LTSFEPEALGNLVEGMDFHKFYFENLLSKNSKPIHTTILNPHVHVIGE 89 (143)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHEEEE--EEEECGGGTTCEEEHHHHHHHHHHHTTTTCCSCEEEEEEEEEEEECST
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHhcCCC--cEEEeccCCCcEEEcHHHHHHHHHhhhhcCCCceeEEEeCCEEEEecC
Confidence 568999999999999999999999999986 777775 4568899999999999998754445788999999999998
Q ss_pred EEEEEEEEEEe----cCCcc-eeeEEEEEEEEEeCCeEEEEEEeeCCC
Q 024630 221 VGYVTCIEFVR----TKGTS-WGGQFVTNVFEKLDGQWFICIHHASPV 263 (265)
Q Consensus 221 vA~Vt~~e~v~----~~G~~-~g~~raTnVfrR~dG~WrIVhhHaSp~ 263 (265)
.|++.+...+. .+|.+ ....++|+||+|.+|+|||+|||.|++
T Consensus 90 ~aav~~~~~~~~~~~~~g~~~~~~~r~T~v~~k~~g~Wkivh~H~S~~ 137 (143)
T 2ux0_A 90 DAACIAYIRLTQYIDGQGRPRTSQSEETRVWHRRDGKWLNVHYHCSGA 137 (143)
T ss_dssp TEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEETTEEEEEEEEEECC
T ss_pred cEEEEEEeEeeeeecCCCCeeeeeEEEEEEEEEECCEEEEEEEeeCCC
Confidence 66655443332 12432 346799999999999999999999976
No 5
>3b7c_A Uncharacterized protein; NTF-2 like protein, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.70A {Shewanella oneidensis} SCOP: d.17.4.16
Probab=99.87 E-value=3.2e-21 Score=152.96 Aligned_cols=117 Identities=15% Similarity=0.273 Sum_probs=95.2
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccC--cceEEEEEeEEEEEeC
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYE--FPLAIELKNVRVHVRG 219 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~--~pl~iel~dv~V~v~G 219 (265)
.+++|.++.++|++||++||+++|+++|+++++++|++|++ .+.|+++|++.|+..|.... +++.++..++++ +++
T Consensus 3 ~~~~I~~~~~~~~~A~~~~D~~~~~~~y~~~~d~~~~~~~~-~~~G~~~i~~~~~~~f~~~~~~~~l~~~~~~~~~-~~~ 80 (122)
T 3b7c_A 3 PTDDIVQLLKGQEEAWNRGDLDAYMQGYWQNEQLMLISNGK-FRNGWDETLAAYKKNYPDKESLGELKFTIKEIKM-LSN 80 (122)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHTTBCCSTTCEEECSSC-EEECHHHHHHHHHHHCSSGGGSCEEEEEEEEEEE-EET
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHhhcCCCCEEEECCCc-cccCHHHHHHHHHHhcCChhhcCeeEEEEEEEEE-cCC
Confidence 35789999999999999999999999998777799999876 78999999999999886422 235555555543 588
Q ss_pred CEEEEEEEEEEecCCcceeeEEEEEEEEEeCCeEEEEEEeeC
Q 024630 220 NVGYVTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICIHHAS 261 (265)
Q Consensus 220 DvA~Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVhhHaS 261 (265)
|+|++++...+...... ...++|+||+|++|+|||+|+|.|
T Consensus 81 ~~a~v~~~~~~~~~~~~-~~~r~T~v~~k~~g~W~Iv~~H~S 121 (122)
T 3b7c_A 81 YAAMVVGRWDLKRLKDT-PTGVFTLLVEKIDDRWVITMDHSS 121 (122)
T ss_dssp TEEEEEEEEEEECSSCC-CEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CEEEEEEEEEEEccCCC-CCcEEEEEEEEeCCCEEEEEEecC
Confidence 99999887777643222 234899999999999999999998
No 6
>3soy_A NTF2-like superfamily protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.00A {Salmonella enterica subsp}
Probab=99.85 E-value=2e-21 Score=160.25 Aligned_cols=122 Identities=17% Similarity=0.207 Sum_probs=99.8
Q ss_pred cchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHH-HHhccCcceEEEEEeEE-EEEe
Q 024630 141 DSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEV-VWMNYEFPLAIELKNVR-VHVR 218 (265)
Q Consensus 141 Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~-vfa~~~~pl~iel~dv~-V~v~ 218 (265)
+.+++|.+++++|++|+.++|+++|+++|++|+.++|++|+|. +.|+++|++.|.. .+.+......+++.++. |.+.
T Consensus 7 ~~~~ei~~~~~~~~~Al~~~D~~~l~~l~~~~~~~~~i~~~g~-~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~I~v~ 85 (145)
T 3soy_A 7 TVKQEITEGINRYLYSIDKADPTLGKQLFYVSPETSFIHPRGH-ERGWSQIAENFYGTTMGKTFSKRTLKLDAPPAIHVY 85 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHTTTBCCSSSCEEEETTEE-EESHHHHHHHCCCCCCCCTEEEEEEEESSCCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHHHHhCCCCeEEEcCCCc-ccCHHHHHHHHHHhhhhccccccceEEeeeeEEEEc
Confidence 5678999999999999999999999999999999999999874 6999999999953 22211112467788888 7999
Q ss_pred CCEEEEEEEEEEe----cCCcc-eeeEEEEEEEEEe-CCeEEEEEEeeCCC
Q 024630 219 GNVGYVTCIEFVR----TKGTS-WGGQFVTNVFEKL-DGQWFICIHHASPV 263 (265)
Q Consensus 219 GDvA~Vt~~e~v~----~~G~~-~g~~raTnVfrR~-dG~WrIVhhHaSp~ 263 (265)
||+|++++...+. .+|.+ ....++|+||+|. +|+|||+|+|.|++
T Consensus 86 gd~A~v~~~~~~~~~~~~~G~~~~~~~r~T~V~~r~~~ggWkIvh~H~S~~ 136 (145)
T 3soy_A 86 GNAAVAEFDWHFTAVRRDNGQTQHTTGRESQVWAKIPNTGWRIVHVHYSGP 136 (145)
T ss_dssp TTEEEEEEEEEEEEEETTTCCEEEEEEEEEEEEEEETTTEEEEEEEEEECC
T ss_pred CCEEEEEEEEEEEEEEcCCCCeeeeEEEEEEEEEEcCCCCEEEEEEecCCC
Confidence 9999998776543 24544 4568999999996 59999999999976
No 7
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=99.85 E-value=7e-20 Score=142.57 Aligned_cols=120 Identities=16% Similarity=0.239 Sum_probs=101.9
Q ss_pred ccchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeC
Q 024630 140 EDSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRG 219 (265)
Q Consensus 140 ~Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~G 219 (265)
++.+++|.++.++|++||++||+++|+++|++| +++++|++..+.|+++|++.|+..++.+ ...+++..+.|.+.|
T Consensus 2 ~~~~~~I~~~~~~~~~a~~~~D~~~~~~l~a~D--a~~~~~~~~~~~G~~~i~~~~~~~~~~~--~~~~~~~~~~v~~~g 77 (129)
T 3hx8_A 2 QSAKEAIEAANADFVKAYNSKDAAGVASKYMDD--AAAFPPDMARVDGRQNIQKLWQGAMDMG--ISELKLTTLDVQESG 77 (129)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHTTEEEE--EEEECTTSCCEESHHHHHHHHHHHHHTT--CEEEEEEEEEEEEET
T ss_pred chHHHHHHHHHHHHHHHHHcCCHHHHHHhhCCC--eEEeCCCCCcccCHHHHHHHHHHHHhCC--CceEEEEEEEEEcCC
Confidence 356889999999999999999999999999997 6667888788999999999999998753 246777777888999
Q ss_pred CEEEEEEEEEEec---CCcce-eeEEEEEEEEEe-CCeEEEEEEeeCCC
Q 024630 220 NVGYVTCIEFVRT---KGTSW-GGQFVTNVFEKL-DGQWFICIHHASPV 263 (265)
Q Consensus 220 DvA~Vt~~e~v~~---~G~~~-g~~raTnVfrR~-dG~WrIVhhHaSp~ 263 (265)
|+|++.+...+.. +|.+. ...++|.||+|+ ||+|+|+++|.|+.
T Consensus 78 d~A~~~~~~~~~~~~~~G~~~~~~g~~~~v~~r~~dG~W~i~~~~~~~~ 126 (129)
T 3hx8_A 78 DFAFESGSFSLKAPGKDSKLVDAAGKYVVVWRKGQDGGWKLYRDIWNSD 126 (129)
T ss_dssp TEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEECTTSCEEEEEEEEEEC
T ss_pred CEEEEEEEEEEEeeCCCCCeeeeeEEEEEEEEECCCCcEEEEEeecccc
Confidence 9999998777663 45442 357999999999 99999999999874
No 8
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=99.83 E-value=1.5e-19 Score=148.56 Aligned_cols=121 Identities=17% Similarity=0.231 Sum_probs=98.4
Q ss_pred cccchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecC-CCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEE
Q 024630 139 DEDSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHP-GASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHV 217 (265)
Q Consensus 139 ~~Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhP-gg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v 217 (265)
....+.+|.++.++|++||++||+++|+++|++| ++++.| ++..+.|+++|++.|+..++..+ ...++..++++ +
T Consensus 15 ~~~d~~~I~~~~~~~~~A~~~~D~~~l~~l~a~D--av~~~~~~~~~~~G~~~i~~~~~~~~~~~~-~~~i~~~~i~~-~ 90 (156)
T 3h51_A 15 ADGEAREVAALFDTWNAALATGNPHKVADLYAPD--GVLLPTVSNEVRASREQIENYFEMFLTKKP-KGVINYRTVRL-L 90 (156)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHTCHHHHHTTEEEE--EEEECSSCSSCBCSHHHHHHHHHHHGGGCC-EEEEEEEEEEE-C
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCHHHHHhhcCCC--EEEecCCCCccccCHHHHHHHHHHHHhhCC-CCcccceEEEE-e
Confidence 3456899999999999999999999999999997 555655 45678999999999999987653 24566666664 4
Q ss_pred eCCEEEEEEEEEEec---CCcc-eeeEEEEEEEEEeCCeEEEEEEeeCCC
Q 024630 218 RGNVGYVTCIEFVRT---KGTS-WGGQFVTNVFEKLDGQWFICIHHASPV 263 (265)
Q Consensus 218 ~GDvA~Vt~~e~v~~---~G~~-~g~~raTnVfrR~dG~WrIVhhHaSp~ 263 (265)
+||+|++++...+.. +|.. ....++|.||+|+||+|||+|+|.|++
T Consensus 91 ~gd~A~~~~~~~~~~~~~~G~~~~~~~r~t~v~~r~dG~WkIv~~H~S~~ 140 (156)
T 3h51_A 91 DDDSAVDAGVYTFTLTDKNGKKSDVQARYTFVYEKRDGKWLIINHHSSAM 140 (156)
T ss_dssp SSSEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred cCCeEEEEEEEEEEEEcCCCCeEEEEeEEEEEEEEECCEEEEEEEeecCC
Confidence 799999998776653 4543 345799999999999999999999976
No 9
>2rcd_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.32A {Pectobacterium atrosepticum SCRI1043} SCOP: d.17.4.18
Probab=99.83 E-value=7.9e-20 Score=145.96 Aligned_cols=115 Identities=16% Similarity=0.203 Sum_probs=89.7
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCC-E
Q 024630 143 KTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGN-V 221 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GD-v 221 (265)
.++|.++..+|.+|+++||+++|+++|++|+.++|++ ++..+.|+++|++ |+..+.+. ++.+++.++.+...|+ +
T Consensus 13 ~~ei~~~~~~y~~A~~~~D~~~l~~lf~~d~~~~~~~-~~~~~~G~~~i~~-~~~~~~~~--~~~~~~~~~~~~~~~~d~ 88 (129)
T 2rcd_A 13 LADVTAAFYRYEKALTGNDVAVLDELFWHDEKTVRYG-AGENLYGIEEIRA-FRLARPSA--GLDRALRNTVITTYGHDM 88 (129)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHBCCSTTCEEEE-TTEEEESHHHHHH-HHHHSCCT--TCCCEEEEEEEEEBTTSE
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHhccCCCCEEEEC-CCCccCCHHHHHH-HHHhcCCC--CCceEEEEEEEEEecCcE
Confidence 3455555555559999999999999999999999998 6668899999999 99998754 3567777777776665 8
Q ss_pred EEEEEEEEEecCCcceeeEEEEEEEEEeCCeEEEEEEeeCCCC
Q 024630 222 GYVTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICIHHASPVD 264 (265)
Q Consensus 222 A~Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVhhHaSp~~ 264 (265)
|++.+...... +... .+.|+||+|.+|+|||+|||.||+.
T Consensus 89 A~~~~~~~~~~-~~~~--g~~t~v~~r~~~gWrIv~~H~S~~~ 128 (129)
T 2rcd_A 89 AVASTEFTRTG-STKI--GRQMQTWVKMPEGWRIVAAHVSLMS 128 (129)
T ss_dssp EEEEEEEECSS-CCSC--EEEEEEEEEETTEEEEEEEEEEECC
T ss_pred EEEEEEEEEcC-CCCc--eeEEEEEEECCCcEEEEEEecCCCC
Confidence 88765444322 2223 3669999999999999999999874
No 10
>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16
Probab=99.83 E-value=7.6e-20 Score=149.01 Aligned_cols=116 Identities=20% Similarity=0.209 Sum_probs=97.8
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHH-HHHHHHhccCcceEEEEEeEEEEEeCC
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVME-SWEVVWMNYEFPLAIELKNVRVHVRGN 220 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~a-swe~vfa~~~~pl~iel~dv~V~v~GD 220 (265)
.+++|.+++++|++|+++||+++|+++|++| +++++|++. +.|++++++ .|...+.... .+.+++.+++|.+.||
T Consensus 28 ~~~~i~~~~~~~~~A~~~~D~~~l~~l~a~D--a~~~~~~g~-~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~gd 103 (148)
T 3bb9_A 28 VDSAAGNVVKQFHAALQMGNEAIVRQSLAAN--VQIYEGGKV-ERSLTEYANHHMLADMAYLK-GLTITPKEHQITITGD 103 (148)
T ss_dssp TTSHHHHHHHHHHHHHHHTCHHHHHHHEEEE--EEEEETTEE-ECSHHHHHHTHHHHHHHHHH-TEEEEEEEEEEEEETT
T ss_pred cHHHHHHHHHHHHHHHHhCCHHHHHHhhCCC--eEEEeCCCc-cCCHHHHHHHhHHHHHHhcc-CceEEeeeEEEEEcCC
Confidence 4678999999999999999999999999986 667778765 889999999 9998876433 2788999999999999
Q ss_pred EEEEEEEEEEec--CCcc-eeeEEEEEEE-EEeCCeEEEEEEeeC
Q 024630 221 VGYVTCIEFVRT--KGTS-WGGQFVTNVF-EKLDGQWFICIHHAS 261 (265)
Q Consensus 221 vA~Vt~~e~v~~--~G~~-~g~~raTnVf-rR~dG~WrIVhhHaS 261 (265)
+|++++...... +|.+ ....++|+|| +|++|+|||+|+|.|
T Consensus 104 ~A~~~~~~~~~~~~~G~~~~~~~r~T~v~~~k~~g~WkIvh~H~S 148 (148)
T 3bb9_A 104 IAISTSISHAQGEYKGKSIDSMTMETLVLIKQADGRWKITHVHWS 148 (148)
T ss_dssp EEEEEEEEEEEECCC--CEEEEEEEEEEEEECTTSCEEEEEEEEC
T ss_pred EEEEEEEEEEeeeeCCcccccceEEEEEEeEEcCCcEEEEEEEeC
Confidence 999998877653 3443 3357999999 999999999999997
No 11
>4i4k_A Uncharacterized protein SGCJ; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: CIT PG4 1PE; 1.70A {Streptomyces globisporus}
Probab=99.82 E-value=2e-19 Score=147.18 Aligned_cols=126 Identities=14% Similarity=0.184 Sum_probs=98.1
Q ss_pred hhcccccchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccC--cceEEEEEe
Q 024630 135 LKMLDEDSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYE--FPLAIELKN 212 (265)
Q Consensus 135 i~~l~~Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~--~pl~iel~d 212 (265)
+..+..+.+++|.++.++|++||++||+++|+++|++|..+ +.|| ..+.|+++|++.|+..|+... ..+.++..+
T Consensus 10 ~~~~~~~d~~~i~~l~~~y~~A~~~~D~d~~~~lf~~Da~~--~~~g-~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~ 86 (143)
T 4i4k_A 10 ITSAPDAALAAVAALPARIVAAWADHDADRFADVFAEDGTM--ILPG-LFRKGRENIRTHMAAAFAGPYKGTRVIGSPID 86 (143)
T ss_dssp SCCHHHHHHHHHHTHHHHHHHHHHTTCHHHHHTTEEEEEEE--EETT-EEEESHHHHHHHHHHHHHTTTTTCEEEEEEEE
T ss_pred cccCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHhhcCceE--EeCC-CeecCHHHHHHHHHHHHhhcCCCCeEEeeeEE
Confidence 34445567889999999999999999999999999998543 4455 678999999999999987542 224445554
Q ss_pred EEEEEeCCEEEEEEEEEEecCCcc----eeeEEEEEEEEEeCCeEEEEEEeeCCCC
Q 024630 213 VRVHVRGNVGYVTCIEFVRTKGTS----WGGQFVTNVFEKLDGQWFICIHHASPVD 264 (265)
Q Consensus 213 v~V~v~GDvA~Vt~~e~v~~~G~~----~g~~raTnVfrR~dG~WrIVhhHaSp~~ 264 (265)
++ .+++|+|++.....+..+|+. ....+.|+||+|++|+|||++||.||+.
T Consensus 87 i~-~~~~d~A~v~~~~~~~~~g~~~~~~~~~~~~T~v~~r~~g~WrI~~~h~S~v~ 141 (143)
T 4i4k_A 87 AR-LLGDGIALLITEGGILAPGETEASGDGAVRASWLAVEQDGQWRLAAYQNSPRG 141 (143)
T ss_dssp EE-EEETTEEEEEEEEEEECTTCSSCCGGGEEEEEEEEEEETTEEEEEEEEEEECC
T ss_pred EE-EcCCCEEEEEeccceecCCCCCCCcccceEEEEEEEEECCcEEEEEecCCccC
Confidence 44 479999999865444444432 2457999999999999999999999974
No 12
>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15
Probab=99.78 E-value=2.7e-18 Score=133.14 Aligned_cols=117 Identities=9% Similarity=0.145 Sum_probs=93.5
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCE
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNV 221 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDv 221 (265)
.+++|.+++++|++|+.++|+++|+++|++| +++++|+|. ..|++++.+.|..-. .....+++.+++|.+.||.
T Consensus 4 ~~~~i~~l~~~~~~A~~~~D~~~l~~l~~~d--~~~~~~~G~-~~~~~~~i~~~~~~~---~~~~~~~~~~~~v~~~g~~ 77 (123)
T 2r4i_A 4 QRDVILDCEKKLLTAIQNNDVESLEVLLHDD--LLFIIPSGE-TVTKETDIAAYSSGK---IALRAVVPSDYIIRIIHDT 77 (123)
T ss_dssp HHHHHTHHHHHHHHHHHHTCHHHHHHHEEEE--EEEECTTSC-EECHHHHHHHHHTTC---EEEEEEEEEEEEEEEETTE
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHhhhCcC--eEEECCCCC-CccHHHHHHHHhcCC---eEEEEEeecccEEEEECCE
Confidence 3578999999999999999999999999986 999999875 568888777665321 1235788889999999998
Q ss_pred EEEEEEEEEe--cCCcc-eeeEEEEEEEEEeCCeEEEEEEeeCCCC
Q 024630 222 GYVTCIEFVR--TKGTS-WGGQFVTNVFEKLDGQWFICIHHASPVD 264 (265)
Q Consensus 222 A~Vt~~e~v~--~~G~~-~g~~raTnVfrR~dG~WrIVhhHaSp~~ 264 (265)
|++++...+. ..|.+ .+..+.|+||+|.+|+|||+|||.||+.
T Consensus 78 a~~~~~~~~~~~~~g~~~~~~~r~t~vw~r~~g~W~iv~~h~S~~~ 123 (123)
T 2r4i_A 78 VVVSVNIEIKGEYMEHTLDNTFRYLRVWKLFDGNWKVIAGSCTAIG 123 (123)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTEEEEEEEEEEECC
T ss_pred EEEEEEEEEEEEECCcceeEEEEEEEEEEEeCCeEEEEEEEEEecC
Confidence 8887733332 24544 4567899999999999999999999863
No 13
>2owp_A Hypothetical protein BXE_B1374; cystatin-like fold, DUF3225 family protein, structural genom joint center for structural genomics, JCSG; 2.00A {Burkholderia xenovorans} SCOP: d.17.4.18
Probab=99.78 E-value=1.5e-18 Score=141.21 Aligned_cols=116 Identities=16% Similarity=0.146 Sum_probs=93.9
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeC-C
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRG-N 220 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~G-D 220 (265)
.+++|.++..+|++|+.++|+++|+++|++|+.++|+ |+|..+.|+++|++ |+..+.... ...++.++.|.+.| |
T Consensus 9 ~~~eI~~~~~~y~~Al~~~D~~~L~~lf~~d~~~v~~-~~g~~l~G~~~I~a-~r~~~~~~~--~~~~~~~~~i~~~g~d 84 (129)
T 2owp_A 9 IVAQVQAAFVEYERALVENDIEAMNALFWHTPETVRY-GIAEVQHGGEAIRA-WRERCEPVP--KSRKLHRTVVTTFGTD 84 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHTBCCSTTCEEE-CSSCEEESHHHHHH-HHHHSCCCC--TTCEEEEEEEEEETTT
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHhhccCCCcEEEe-CCCCccCCHHHHHH-HHHhcCCCC--CceeecccEEEEecCC
Confidence 4678999999999999999999999999999988888 55789999999999 887775432 24566677788888 6
Q ss_pred EEEEEEEEEEecCCcceeeEEEEEEEEEeC--CeEEEEEEeeCCCC
Q 024630 221 VGYVTCIEFVRTKGTSWGGQFVTNVFEKLD--GQWFICIHHASPVD 264 (265)
Q Consensus 221 vA~Vt~~e~v~~~G~~~g~~raTnVfrR~d--G~WrIVhhHaSp~~ 264 (265)
.|+++... ... |.. ...++|+||+|.+ ++|||+++|.|++.
T Consensus 85 ~A~~~~~~-~~~-~~~-~~gr~t~vw~r~~~~~gWrIv~~H~S~~~ 127 (129)
T 2owp_A 85 FATVSTEF-TSD-ATP-LLGRQMQTWARLSPADGWKIVAAHVSLIA 127 (129)
T ss_dssp EEEEEEEE-EET-TEE-EEEEEEEEEEECSTTTCEEEEEEEEEEEC
T ss_pred EEEEEEEE-EEC-CCC-cceEEEEEEEECCCCCCEEEEEeeecCCC
Confidence 99987543 333 333 2448899999999 99999999999864
No 14
>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0
Probab=99.77 E-value=6.8e-18 Score=135.73 Aligned_cols=116 Identities=16% Similarity=0.213 Sum_probs=92.9
Q ss_pred cchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccC-cceEEEEEeEEEEEeC
Q 024630 141 DSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYE-FPLAIELKNVRVHVRG 219 (265)
Q Consensus 141 Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~-~pl~iel~dv~V~v~G 219 (265)
+.+++|.+++++|++|+.+||+++|++||++| +++++|+|.. .+++++.+.|+. +. ....+++.+.+|.+.|
T Consensus 11 ~~~~~I~~l~~~~~~A~~~~D~~~l~~L~~~d--~~~v~~~G~~-~~~~~~l~~~~~----g~~~~~~~~~~~~~v~~~g 83 (134)
T 3fsd_A 11 SPADDIAFYEERLRAAMLTGDLKGLETLLADD--LAFVDHTGCV-KTKQTHLEPYRA----GLLKLSRLDLSDAVVRAAG 83 (134)
T ss_dssp ---CCHHHHHHHHHHHHHHTCHHHHHHHEEEE--EEEECTTSCE-ECHHHHHHHHHT----TCEEEEEEEEEEEEEEESS
T ss_pred ChHHHHHHHHHHHHHHHHhCCHHHHHhhcCCC--EEEECCCCcC-ccHHHHHHHHHc----CCceEEEEEEeccEEEEeC
Confidence 44778999999999999999999999999986 8899998765 456666665542 22 1257888999999999
Q ss_pred C-EEEEEEEEEEec--CCcc-eeeEEEEEEEEEeCCe--EEEEEEeeCCC
Q 024630 220 N-VGYVTCIEFVRT--KGTS-WGGQFVTNVFEKLDGQ--WFICIHHASPV 263 (265)
Q Consensus 220 D-vA~Vt~~e~v~~--~G~~-~g~~raTnVfrR~dG~--WrIVhhHaSp~ 263 (265)
| +|++++...+.. +|.+ .+..+.|+||+|.+|+ |||+++|+||+
T Consensus 84 ~d~Avv~~~~~~~~~~~g~~~~~~~~~t~vw~k~~g~~gWriv~~h~S~i 133 (134)
T 3fsd_A 84 EDGRVVVVRAVTAGVYDGEAFTETLRFTRIWRRTQGPAGWKLVAGHCSVI 133 (134)
T ss_dssp TTEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEC
T ss_pred CCEEEEEEEEEEEEEeCCcEEEEEEEEEEEEEECCCCccceEeEeEEEec
Confidence 9 999998776653 4544 4567999999999999 99999999985
No 15
>3ke7_A Putative ketosteroid isomerase; structural genomics, joint C structural genomics, JCSG, protein structure initiative; HET: MSE BCN; 1.45A {Parabacteroides distasonis atcc 8503}
Probab=99.77 E-value=7.2e-18 Score=138.94 Aligned_cols=120 Identities=18% Similarity=0.149 Sum_probs=98.8
Q ss_pred hhcccccchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCC-CCccCHHHHHHHHHHHHhccCcceEEEEEeE
Q 024630 135 LKMLDEDSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGA-SGISGYDPVMESWEVVWMNYEFPLAIELKNV 213 (265)
Q Consensus 135 i~~l~~Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg-~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv 213 (265)
-+.|.+..+.+|.++.++. +++||+++++++|++| ++++.|.+ .++.|+++++++|+.+.+. .+..+++.+.
T Consensus 8 ~~~~~~~~~~~i~~~~~~~---L~~gD~~~~~~lyapD--vt~fDp~~~~~~~G~~a~r~yf~~~~~~--~~~~~ei~~p 80 (134)
T 3ke7_A 8 NKTLNENIPEMIISLEKEA---LASTDPMAFVELSDTD--VIYFDPSLETKIEGLEQLRTYYKGMQLP--PADHFDMIRP 80 (134)
T ss_dssp CSSTTSSHHHHHHHHHHHH---HHCSCTTHHHHHEEEE--EEEECTTCSSCEESHHHHHHHHHHHCCC--CCSEEEEEEE
T ss_pred ccchhHHHHHHHHHHhHHH---HhCCCHHHHHHhcCCC--EEEEcCCCccccCCHHHHHHHHHhcccC--CcceEEEeCC
Confidence 3567777888999988866 6999999999999986 88888854 3578999999999884322 3468999999
Q ss_pred EEEEeCCEEEEEEEEEEecCCcceeeEEEEEEEEEe-CCeEEEEEEeeCC
Q 024630 214 RVHVRGNVGYVTCIEFVRTKGTSWGGQFVTNVFEKL-DGQWFICIHHASP 262 (265)
Q Consensus 214 ~V~v~GDvA~Vt~~e~v~~~G~~~g~~raTnVfrR~-dG~WrIVhhHaSp 262 (265)
+|.++||+|++++......+|. ..+.+.|.||||. ||+|+|||+|.|.
T Consensus 81 ~V~v~gD~A~~~y~l~~~~~~~-~~~~r~T~V~~r~~dG~W~ivH~H~S~ 129 (134)
T 3ke7_A 81 VVQVAQNIAVLTFNLDSYLSDK-VIKWNCTEVYRRNPDNQWKIIQTHWSY 129 (134)
T ss_dssp EEEEETTEEEEEEEEEEEETTE-EEEEEEEEEEEECTTSBEEEEEEEEEE
T ss_pred eEEEeCceEEEEEEEEEeeCCC-cEEEEEEEEEEEcCCCcEEEEEEeecc
Confidence 9999999999987655444443 4678999999999 9999999999995
No 16
>2gxf_A Hypothetical protein YYBH; alpha-beta protein., structural genomics, PSI, protein structure initiative; HET: MES; 3.10A {Bacillus subtilis} SCOP: d.17.4.22
Probab=99.76 E-value=4.4e-18 Score=137.40 Aligned_cols=117 Identities=15% Similarity=0.223 Sum_probs=91.4
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEE
Q 024630 143 KTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVG 222 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA 222 (265)
+.+|.++.++|++|+++||+++++++|++|. +++..| |.++.|+++|++.|+.+++.......+++.++.+.+.||.|
T Consensus 2 ~~~I~~l~~~~~~A~~~~D~d~~~~lfa~Da-v~~~~~-g~~~~G~~aI~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~A 79 (142)
T 2gxf_A 2 EQQLKDIISACDLAIQNEDFDTLMNYYSEDA-VLVVKP-GMIARGKEEIKKAFITIANYFNHHIVPTQGKMILLEAGDTV 79 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHTTSEEEEE-EEECSS-SCEEEHHHHHHHHHHHTTSCCCSSCCCEEEEEEEEEETTEE
T ss_pred cHHHHHHHHHHHHHHHcCCHHHHHHhcCCCE-EEEcCC-CCcccCHHHHHHHHHHHHHhhCCCceEEEEEEEEEEcCCEE
Confidence 4689999999999999999999999999984 334555 67899999999999998764322345666777888999999
Q ss_pred EEEEEEEEec--CCcc-eeeEEEEEEEEE-eCCeEEEEEEeeC
Q 024630 223 YVTCIEFVRT--KGTS-WGGQFVTNVFEK-LDGQWFICIHHAS 261 (265)
Q Consensus 223 ~Vt~~e~v~~--~G~~-~g~~raTnVfrR-~dG~WrIVhhHaS 261 (265)
++++.+.+.. +|.+ ....++|.||+| .||+|||++.|.+
T Consensus 80 ~~~~~~~~~~~~~G~~~~~~g~~t~v~~r~~dG~Wri~~d~~~ 122 (142)
T 2gxf_A 80 LVLSQTLLDSDKKDSEYAMERRATYVFKKNAQGEWLCVIDNSY 122 (142)
T ss_dssp EEEEEEECCC---------EEEEEEEEEECTTSCEEEEEEETT
T ss_pred EEEEEEEEEECCCCCeEeeeEEEEEEEEECCCCCEEEEEECCC
Confidence 9998877653 3433 234689999999 6999999999965
No 17
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=99.76 E-value=7.3e-18 Score=139.64 Aligned_cols=116 Identities=18% Similarity=0.286 Sum_probs=95.4
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecC--CCCCccCHHHHHHHHHHHHhccC-cceEEEEEeEEEEEe
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHP--GASGISGYDPVMESWEVVWMNYE-FPLAIELKNVRVHVR 218 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhP--gg~~l~Gr~aI~aswe~vfa~~~-~pl~iel~dv~V~v~ 218 (265)
.+++|+++.+++.+|+++||.+++++++++| ++++.| .+..+.|.+.++.. |.+.. .++..++.+++|.+.
T Consensus 10 ~~~eI~~~~~~~~~Ai~~gD~~~~~~l~~~d--v~~Fd~~~~g~~~~g~~~~r~~----f~~~~~~~~~~~~~~~~V~~~ 83 (143)
T 2f86_B 10 QKQDIVRVTQTLLDAISCKDFETYTRLCDTS--MTCFEPEALGNLIEGIEFHRFY----FDGNRKNQVHTTMLNPNVHII 83 (143)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHEEEE--EEEECGGGTTCCEETTHHHHTT----SSSCSCCSCEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHhcCCC--EEEEccCcCCccccCHHHHHHH----HhcccCCcceeEEEcceEEEe
Confidence 4578999999999999999999999999886 888887 56678999888843 44322 357889999999999
Q ss_pred C-CEEEEEEEEEEec---CCcc-eeeEEEEEEEEEeCCeEEEEEEeeCCC
Q 024630 219 G-NVGYVTCIEFVRT---KGTS-WGGQFVTNVFEKLDGQWFICIHHASPV 263 (265)
Q Consensus 219 G-DvA~Vt~~e~v~~---~G~~-~g~~raTnVfrR~dG~WrIVhhHaSp~ 263 (265)
| |+|++++...... +|.+ .++.+.|.||+|.+|+|||+|.|.|+.
T Consensus 84 g~d~Av~~y~~~~~~~~~~G~~~~~~~r~T~V~~k~~g~WkivH~H~S~~ 133 (143)
T 2f86_B 84 GEDAACVAYVKLTQFLDRNGEAHTRQSQESRVWSKKQGRWVCVHVHRSTQ 133 (143)
T ss_dssp TTTEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEETTEEEEEEEEEEC-
T ss_pred CCCEEEEEEEeeeeeccCCCCeeeEEEEEEEEEEEeCCcEEEEEEeECCC
Confidence 9 9999996544432 4654 567899999999999999999999975
No 18
>3gzr_A Uncharacterized protein with A NTF2-like fold; structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: MSE GOL; 1.40A {Caulobacter vibrioides}
Probab=99.75 E-value=1.7e-17 Score=136.79 Aligned_cols=122 Identities=10% Similarity=0.111 Sum_probs=96.2
Q ss_pred cchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEE-EEeC
Q 024630 141 DSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRV-HVRG 219 (265)
Q Consensus 141 Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V-~v~G 219 (265)
+++++|.++.++|.+||+++|+++++++|++| .+++...|..+.|+++|++.|+..|+.......+++....| .+++
T Consensus 3 ed~~aI~~l~~~~~~A~~~~D~d~~~~lf~~D--a~~~~~~G~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (146)
T 3gzr_A 3 EGTDAIQALIQAYFTAWNTNAPERFAEIFWPD--GSWVNVVGMHWRGRDQIVFAHTAFLKTIFKDCKQELVTIEARTIAP 80 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCGGGSGGGEEEE--EEEECTTCCEEESHHHHHHHHHHHHHTTTTTCCEEEEEEEEEEEET
T ss_pred ccHHHHHHHHHHHHHHHHcCCHHHHHhhccCC--eEEEcCCCCeeeCHHHHHHHHHHHhhcccCCCEEEEeEEEEEEcCC
Confidence 45789999999999999999999999999998 55554445788999999999999886533112344444454 4789
Q ss_pred CEEEEEEEEEEe----cCCcce--eeEEEEEEEEEeCCeEEEEEEeeCCCC
Q 024630 220 NVGYVTCIEFVR----TKGTSW--GGQFVTNVFEKLDGQWFICIHHASPVD 264 (265)
Q Consensus 220 DvA~Vt~~e~v~----~~G~~~--g~~raTnVfrR~dG~WrIVhhHaSp~~ 264 (265)
|+|++.+...+. .+|... ...+.|.||+|++|+|||+++|.||++
T Consensus 81 D~A~v~~~~~l~g~~~~~G~~~~~~~~~~t~v~vr~dg~WrI~a~h~s~v~ 131 (146)
T 3gzr_A 81 GSALAVVTLIQDAYVTPDGRQMPRAHDRLTLLAVEREGVWRFIHGHNTIVN 131 (146)
T ss_dssp TEEEEEEEEEECCEECTTCCEECCEEEEEEEEEEEETTEEEEEEEEEEECC
T ss_pred CEEEEEEEEEecceeCCCCCcCCccCcEEEEEEEEECCEEEEEEEecccCc
Confidence 999999887664 245432 356889999999999999999999874
No 19
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=99.75 E-value=6e-17 Score=127.09 Aligned_cols=119 Identities=18% Similarity=0.254 Sum_probs=93.4
Q ss_pred cchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEE-eC
Q 024630 141 DSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHV-RG 219 (265)
Q Consensus 141 Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v-~G 219 (265)
..+.+|.++.++|++|+++||+++++++|++| +++++|++.++.|+++|++.|+..++.....+.+++. ++.+ .|
T Consensus 8 ~d~~~i~~~~~~~~~a~~~~D~~~~~~l~a~D--~v~~~~~~~~~~G~~ai~~~~~~~~~~~~~~~~~~~~--~i~~~~g 83 (135)
T 3d9r_A 8 EELAVIEAAAIAYLTAFNRADIPAVIATYTDD--GVLMGPGRPAAVGKDELAEVYLSVFETVGFDMAYEIK--EVVQTSA 83 (135)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHTEEEE--EEEECTTSCCEESHHHHHHHHHHHHHHEEEEEEEEEE--EEEEEET
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHhcCCC--EEEECCCCCcccCHHHHHHHHHHHHhhcCCceeEEEE--EEEEecC
Confidence 34578999999999999999999999999997 6778888878889999999999988643222344444 4445 89
Q ss_pred CEEEEEEEEEEec----CCcc-eeeEEEEEEEEEe-CCeEEEEEEeeCCC
Q 024630 220 NVGYVTCIEFVRT----KGTS-WGGQFVTNVFEKL-DGQWFICIHHASPV 263 (265)
Q Consensus 220 DvA~Vt~~e~v~~----~G~~-~g~~raTnVfrR~-dG~WrIVhhHaSp~ 263 (265)
|.|++.+...... +|.. ....+.+.||+|+ ||+|||++.|.|.+
T Consensus 84 d~a~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~dG~W~i~~~~~s~~ 133 (135)
T 3d9r_A 84 DWAFVRSATEGTETNKATGVVTPAAYQELFLLRKSATGSWQTARYCTSKI 133 (135)
T ss_dssp TEEEEEEEEEEEEEETTTCCEEEEEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred CEEEEEEEEEEEEecCCCCCceeecccEEEEEEecCCCcEEEEEEeeccc
Confidence 9999987655431 3433 2346889999998 99999999998853
No 20
>3rob_A Uncharacterized conserved protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.48A {Planctomyces limnophilus}
Probab=99.74 E-value=5.8e-17 Score=133.19 Aligned_cols=117 Identities=11% Similarity=0.209 Sum_probs=93.0
Q ss_pred ccchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeC
Q 024630 140 EDSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRG 219 (265)
Q Consensus 140 ~Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~G 219 (265)
.+.+.+|.++.++|++|+++||+++++++|++| +++++++++.+ |++++++.|...+.... +.+.++...+.+.|
T Consensus 13 ~~de~aI~~l~~~~~~A~~~gD~~~l~al~a~D--~v~~~~g~~~~-Gr~ai~a~~~~~~~~~~--~~~~~~~~~i~v~G 87 (139)
T 3rob_A 13 HADELAIRTVQYRWLEATRKFDRQVLSSLMTDD--VVFLTPGRLPF-GKEEFLAACEQNDQRVI--IEASATFEEIVIVE 87 (139)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHTEEEE--EEEECTTSCCB-CHHHHHHHHHHHHHHEE--EEEEEEEEEEEEET
T ss_pred hhHHHHHHHHHHHHHHHHHcCCHHHHHHHccCc--EEEECCCCCcc-CHHHHHHHHHHHHHhcC--CCCceEEEEEEEcC
Confidence 456889999999999999999999999999997 66777776555 99999999998886543 34444444567899
Q ss_pred CEEEEEEEEEEec----CCccee-eEEEEEEEEE-eCCeEEEEEEeeC
Q 024630 220 NVGYVTCIEFVRT----KGTSWG-GQFVTNVFEK-LDGQWFICIHHAS 261 (265)
Q Consensus 220 DvA~Vt~~e~v~~----~G~~~g-~~raTnVfrR-~dG~WrIVhhHaS 261 (265)
|+|++++...+.. +|.+.. ..+++.|||| .||+|+|++.+.-
T Consensus 88 D~A~~~~~~~~~~t~~~~g~~~~~~g~~~~v~rK~~dG~W~i~~d~~~ 135 (139)
T 3rob_A 88 PMAYTRTHLHIKVTPRSGGAVRELAGHAMSIFRRSMFGEWQLARDANL 135 (139)
T ss_dssp TEEEEEEEEEEEEEETTSCCCEEEEEEEEEEEEECTTSCEEEEEEEEC
T ss_pred CeEEEEEEEEEEEecCCCCceeEeeccEEEEEEECCCCcEEEEEEhhh
Confidence 9999998877652 333322 3468889999 8999999999873
No 21
>3cu3_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; 2.00A {Nostoc punctiforme} SCOP: d.17.4.28
Probab=99.73 E-value=6.3e-17 Score=134.74 Aligned_cols=120 Identities=13% Similarity=0.122 Sum_probs=93.2
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhcc-C-cceEEEEEeEEEEEeC
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNY-E-FPLAIELKNVRVHVRG 219 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~-~-~pl~iel~dv~V~v~G 219 (265)
.+.+|.++.++|++|++++|+++|+++|++| .+++.+.|..+.|+++|++.|+..+... . ..+.++...++ .++|
T Consensus 14 d~~aI~~~~~~~~~A~~~~D~d~~~~lfa~D--a~~~~~~g~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~ 90 (172)
T 3cu3_A 14 DESAIRAFHRQMIDAWNRGSGEGFAAPFSET--ADFITFEGTHLKGRKEIAAFHQQAFDTVVKGTRLEGEVDFVR-FVNS 90 (172)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHTTEEEE--EEEECTTCCEEEHHHHHHHHHHHHHHTTTTTCEEEEEEEEEE-EEET
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHhhcCCC--eEEEeCCCCeEECHHHHHHHHHHHhhccCCCcEEEEEEeEEE-EeCC
Confidence 4678999999999999999999999999998 4445555678999999999999988652 2 22334444443 3678
Q ss_pred CEEEEEEEEEEecCCc----ceeeEEEEEEEEEeCCeEEEEEEeeCCCC
Q 024630 220 NVGYVTCIEFVRTKGT----SWGGQFVTNVFEKLDGQWFICIHHASPVD 264 (265)
Q Consensus 220 DvA~Vt~~e~v~~~G~----~~g~~raTnVfrR~dG~WrIVhhHaSp~~ 264 (265)
|+|++.+...+...|. .....++|.||+|++|+|||+++|.|++.
T Consensus 91 d~A~v~~~~~~~~~g~~~~~~~~~~~~t~v~~r~dG~WrI~~~~~s~~~ 139 (172)
T 3cu3_A 91 QLALMLVVIRVILPGQTETSASRDSLPLYVVTKGDEGWQIEGLLNTRKL 139 (172)
T ss_dssp TEEEEEEEEEEECTTCSSBCGGGCBCCEEEEEEETTEEEEEEEECCBCC
T ss_pred CEEEEEEEEEEEeCCCCCcCCccceEEEEEEEEeCCeEEEEEEEcCccc
Confidence 9999987655554332 12346899999999999999999999864
No 22
>3ksp_A Calcium/calmodulin-dependent kinase II associatio; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG; HET: MSE NHE; 2.59A {Exiguobacterium sibiricum 255-15}
Probab=99.56 E-value=5.3e-14 Score=115.31 Aligned_cols=117 Identities=10% Similarity=0.055 Sum_probs=94.0
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccC-cceEEEEEeEEEEEeCC
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYE-FPLAIELKNVRVHVRGN 220 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~-~pl~iel~dv~V~v~GD 220 (265)
.+++|.++.+++++|+.++|.++|.+|.+|| .++++|.|. ...++++.+++.. .+. ....++..+..|.+.||
T Consensus 7 ~~~~~~~le~~~~~A~~~~D~~~L~~LL~dd--f~~v~~sG~-~~~K~~~L~~~~~---~~~~~~~~~~~~~~~vr~~gd 80 (129)
T 3ksp_A 7 KHLQLQTLLSERHAYLMEGNREAMHQLLSSD--FSFIDGQGR-QFDAETYLDHYVD---PDQIQWSNQISESMVVEVFET 80 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHEEEE--EEEECTTCC-EECHHHHHHHHSC---TTTEEEEEEEEEEEEEEECSS
T ss_pred hHHHHHHHHHHHHHHHHhCCHHHHHhhcCCC--EEEECCCCC-CcCHHHHHHHhcc---CCCccceeecccceeEEEECC
Confidence 4789999999999999999999999999987 899999985 5677777764422 111 12356677889999999
Q ss_pred EEEEEEEEEEe--cCCcc-eeeEEEEEEEEEeCCeEEEEEEeeCCCC
Q 024630 221 VGYVTCIEFVR--TKGTS-WGGQFVTNVFEKLDGQWFICIHHASPVD 264 (265)
Q Consensus 221 vA~Vt~~e~v~--~~G~~-~g~~raTnVfrR~dG~WrIVhhHaSp~~ 264 (265)
+|+|++.-... .+|.+ .+..++|.||+|.+|+|||+.+|++|++
T Consensus 81 ~AvVt~~~~~~~~~~g~~~~~~~~~t~VW~~~~g~Wrlva~q~Tp~~ 127 (129)
T 3ksp_A 81 TALVQEIVEDHFSYGRSMYIGRFRSVSLYHWANEGWKWHFHQLTPLD 127 (129)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEEEEEEecCCeEEeEEEEEEEEEEEeCCeeEEEEEeeEecC
Confidence 99999865554 35554 4678999999999999999999999875
No 23
>2chc_A Protein RV3472; hypothetical protein; 1.69A {Mycobacterium tuberculosis} SCOP: d.17.4.25
Probab=99.41 E-value=5e-12 Score=104.44 Aligned_cols=117 Identities=18% Similarity=0.117 Sum_probs=91.2
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCE
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNV 221 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDv 221 (265)
.+.+|.++..+|++|+.++|++++.++|++| .++..|+ ....|+++|++.|+..++. . .....+.++.|.+.||.
T Consensus 12 d~~~I~~l~~~y~~a~D~~D~~~~~~lf~~D--a~~~~~g-~~~~G~~~i~~~~~~~~~~-~-~~~h~~~~~~i~~~gd~ 86 (170)
T 2chc_A 12 EILRIQALCARYCLTINTQDGEGWAGCFTED--GAFEFDG-WVIRGRPALREYADAHARV-V-RGRHLTTDLLYEVDGDV 86 (170)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHTTEEEE--EEEEETT-EEEESHHHHHHHHHHHHHH-C-CCCEEEEEEEEEEETTE
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHhcccCc--EEEEeCC-CCcCCHHHHHHHHHHhhcc-c-ceEEecCCeEEEEeCCE
Confidence 3678999999999999999999999999998 4445565 4679999999999988765 2 23445667777789999
Q ss_pred EEEEEEEEE--e-cCCcc-eeeEEEEEEEEEeCCeEEEEEEeeCCC
Q 024630 222 GYVTCIEFV--R-TKGTS-WGGQFVTNVFEKLDGQWFICIHHASPV 263 (265)
Q Consensus 222 A~Vt~~e~v--~-~~G~~-~g~~raTnVfrR~dG~WrIVhhHaSp~ 263 (265)
|.+.+...+ . .+|.. ....+++.+|+|+||+|||.++|.+..
T Consensus 87 A~~~~~~~~~~~~~~g~~~~~~g~y~d~~~r~dg~Wri~~r~~~~~ 132 (170)
T 2chc_A 87 ATGRSASVVTLATAAGYKILGSGEYQDRLIKQDGQWRIAYRRLRND 132 (170)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEEEEEEEEcCCCCEEEEEEEEEEEEEEECCEEEEEEEEEEEe
Confidence 988765432 2 23432 234689999999999999999998754
No 24
>3b8l_A Uncharacterized protein; putative aromatic ring hydroxylase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.75A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=99.40 E-value=6.2e-12 Score=103.18 Aligned_cols=119 Identities=11% Similarity=0.100 Sum_probs=90.9
Q ss_pred chhhHHHHHHHHHHHHHc-CCHHHHHhhhcCCCceEEecCC-C-CCccCHHHHHHHHHHHHhccCcceEEEEEeEEEE-E
Q 024630 142 SKTSVLAANARFYDSFKN-GDLATMQGLWARGDNVCCVHPG-A-SGISGYDPVMESWEVVWMNYEFPLAIELKNVRVH-V 217 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~a-GDldAL~alwAdDd~V~~vhPg-g-~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~-v 217 (265)
.+.+|.++..+|.+|+.+ +|++++.++|++| +++..|+ | ..+.|+++|++.|+..+.... .....+.++.|. +
T Consensus 26 d~~~I~~l~~~y~~alD~~~D~d~~~~lfteD--a~~~~~~~g~~~~~G~~~i~~~~~~~~~~~~-~~~h~~~~~~I~~~ 102 (163)
T 3b8l_A 26 DRLAIQDLMIAYAHAVDTVSDIDAVLDVFTED--AVFDLSGIGLTPQVGHAGIREFFTNVFANMS-HHAHYLTNFAVTGY 102 (163)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCHHHHHTTEEEE--EEEECGGGTCCCEEHHHHHHHHHHHHHHHEE-EEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHCcCCCHHHHHhhcCCC--EEEEecCCCCCCccCHHHHHHHHHHhhccCC-ceEEEecCEEEEEe
Confidence 478899999999999999 9999999999998 4444443 2 268999999999988775422 234556677887 8
Q ss_pred eCCEEEEEEEEEEe--c-CCcc-eeeEEEEEEEEEeCCeEEEEEEeeCCC
Q 024630 218 RGNVGYVTCIEFVR--T-KGTS-WGGQFVTNVFEKLDGQWFICIHHASPV 263 (265)
Q Consensus 218 ~GDvA~Vt~~e~v~--~-~G~~-~g~~raTnVfrR~dG~WrIVhhHaSp~ 263 (265)
.||.|.+.+...+. . +|.+ ....+++.+|+|++|+|||.+.|.++.
T Consensus 103 ~gd~A~~~~~~~~~~~~~~g~~~~~~g~y~d~~~r~dg~WrI~~r~~~~~ 152 (163)
T 3b8l_A 103 EGDTASMRAYVIGMGVGKDGRAVTVNGRYFFEVRRTEKGWKATRYTMDFL 152 (163)
T ss_dssp CSSEEEEEEEEEEEEEETTSCEEEEEEEEEEEEEEETTEEEEEEEEEEES
T ss_pred CCCEEEEEEEEEEEEEcCCCCeEEEEEEEEEEEEEeCCEEEEEEEEEEEE
Confidence 89999987554332 2 2433 234689999999999999999998754
No 25
>2rfr_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.16A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=99.40 E-value=4.8e-12 Score=102.22 Aligned_cols=119 Identities=16% Similarity=0.128 Sum_probs=88.5
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhcc--CcceEEEEEeEEEEEeCC
Q 024630 143 KTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNY--EFPLAIELKNVRVHVRGN 220 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~--~~pl~iel~dv~V~v~GD 220 (265)
+.+|.++..+|.+|+.++|++++.++|++| .++..|++....|+++|++.|+...... .......+.++.|.+.||
T Consensus 18 ~~~I~~l~~~y~~a~D~~d~~~~~~lf~~D--a~~~~~~g~~~~G~~~i~~~~~~~~~~~~~~~~~~h~~~~~~i~~~gd 95 (155)
T 2rfr_A 18 REEIRELIARYGPLADSGDAEALSELWVED--GEYAVVGFATAKGRAAIAALIDGQTHRALMADGCAHFLGPATVTVEGD 95 (155)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHTTEEEE--EEEEETTSCCEESHHHHHHHHHSHHHHHHHHHCEEEEECCCEEEEETT
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHhhcCCc--eEEEcCCCccccCHHHHHHHHHhccccccCCCceeEeCCCeEEEEeCC
Confidence 568999999999999999999999999998 4455676543399999999887654311 112345566778888999
Q ss_pred EEEEEEEEEEe--cCCcce--eeEEEEEEEEEeCCeEEEEEEeeCCC
Q 024630 221 VGYVTCIEFVR--TKGTSW--GGQFVTNVFEKLDGQWFICIHHASPV 263 (265)
Q Consensus 221 vA~Vt~~e~v~--~~G~~~--g~~raTnVfrR~dG~WrIVhhHaSp~ 263 (265)
.|.+.+...+. ..|+.. ...+++.+|+|++|+|||.+.|.++.
T Consensus 96 ~A~~~~~~~~~~~~~~~~~~~~~g~y~d~~~r~~g~Wri~~r~~~~~ 142 (155)
T 2rfr_A 96 TATARCHSVVFRCVSGTFGSHRVSANRWTFRRTPAGWRAVRRENALL 142 (155)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEEEEEEEEETTEEEEEEEEEEES
T ss_pred EEEEEEEEEEEEEcCCCceEEEeeeeEEEEEECCCEEEEEEEEEEec
Confidence 99988654432 223221 12467789999999999999998765
No 26
>1tp6_A Hypothetical protein PA1314; structural genomics, alpha-beta sandwich, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.12
Probab=99.30 E-value=4.6e-11 Score=96.34 Aligned_cols=113 Identities=12% Similarity=0.069 Sum_probs=86.3
Q ss_pred hHHHHHHHHHHHHHcC-CHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEE-EEeCCEE
Q 024630 145 SVLAANARFYDSFKNG-DLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRV-HVRGNVG 222 (265)
Q Consensus 145 aI~aa~~afy~Af~aG-DldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V-~v~GDvA 222 (265)
.+....++|.++...+ |+++++++|++| .+.++|+| ...|++++++.|+..++..+ .+.|++.++.+ ..++|.+
T Consensus 11 ~~~~~ie~W~~~~~~~~dl~~l~a~~a~d--~~mv~p~G-~~~g~~~~~~~~~~~~g~~p-gl~i~i~~l~~~~~~~d~~ 86 (128)
T 1tp6_A 11 HAHVAIRDWLAGDSRADALDALMARFAED--FSMVTPHG-VVLDKTALGELFRSKGGTRP-GLRIEIDGESLLASGVDGA 86 (128)
T ss_dssp HHHHHHHHHHHTCCCTTHHHHHHTTEEEE--EEEECTTS-CEEEHHHHHHHHHHHTTCST-TCEEEEEEEEEEEEETTEE
T ss_pred HHHHHHHHHHcCCCcHhHHHHHHHhcCCC--EEEECCCC-eECCHHHHHHHHHHhhCCCC-CeEEEEEEEEEEeecCCEE
Confidence 4555667777666666 999999999997 77777776 57899999999999998665 49999999987 4569999
Q ss_pred EEEEEEEEecCCcceeeEEEEEEEEEe-CCeEEEEEEeeCC
Q 024630 223 YVTCIEFVRTKGTSWGGQFVTNVFEKL-DGQWFICIHHASP 262 (265)
Q Consensus 223 ~Vt~~e~v~~~G~~~g~~raTnVfrR~-dG~WrIVhhHaSp 262 (265)
++.+.+.-..+|+. ...+.|.||+|. +|+|+..|.|.++
T Consensus 87 vv~y~~~~~~~~~~-~~rrsT~v~~~~~~g~~~W~~lHET~ 126 (128)
T 1tp6_A 87 TLAYREIQSDAAGR-SERLSTVVLHRDDEGRLYWRHLQETF 126 (128)
T ss_dssp EEEEEEEEEETTEE-EEEEEEEEEEECTTCCEEEEEEEEEE
T ss_pred EEEEEEEeccCCce-eEEEEEEEEEeCCCCCEEEEEEEEEe
Confidence 99987766655544 456889999765 8864444555443
No 27
>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A
Probab=99.25 E-value=1.3e-10 Score=92.12 Aligned_cols=114 Identities=11% Similarity=0.014 Sum_probs=84.0
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCC-C-------ccCHHHHHHHHHHHHhccCcceEEEEEeE
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGAS-G-------ISGYDPVMESWEVVWMNYEFPLAIELKNV 213 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~-~-------l~Gr~aI~aswe~vfa~~~~pl~iel~dv 213 (265)
.+.++.++.++|++|+++||++++.++|++| +++..|.+. + +.|+++|++.|+..++.. .+.+++.+.
T Consensus 5 ~~~~~~~~v~~~~~a~~~~D~~~~~~l~a~D--~v~~~p~~~~~~~~~g~~~~G~~ai~~~~~~~~~~~--~~~~~~~~~ 80 (139)
T 2a15_A 5 TQSPALIASQSSWRCVQAHDREGWLALMADD--VVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAAN--RLTVTCEET 80 (139)
T ss_dssp CCCHHHHHHHHHHHHHHTTCHHHHHHTEEEE--EEEESSSSSBTTBTTSSCEESHHHHHHHHHHHTTTT--TCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHhCCCHHHHHHhcCCC--EEEECCCCCCccCCCCceeecHHHHHHHHHHhcccc--eeEEeccCc
Confidence 4567888999999999999999999999997 666667443 3 799999999999988754 466666554
Q ss_pred EEEEeCCEEEEEEEEEEe-cCCcceeeEEEEEEEEEeCCeEEEEEEeeC
Q 024630 214 RVHVRGNVGYVTCIEFVR-TKGTSWGGQFVTNVFEKLDGQWFICIHHAS 261 (265)
Q Consensus 214 ~V~v~GDvA~Vt~~e~v~-~~G~~~g~~raTnVfrR~dG~WrIVhhHaS 261 (265)
.+.+.||.+++...-... .+| ....++.+.+|+. ++.|||++++.-
T Consensus 81 ~i~~~g~~~~~~~~~~~~~~~G-~~~~~~~~~~~~~-~~dGkI~~~~~y 127 (139)
T 2a15_A 81 FPSSSPDEIAHILVLHSEFDGG-FTSEVRGVFTYRV-NKAGLITNMRGY 127 (139)
T ss_dssp EECSSTTEEEEEEEEEEEETTT-EEEEEEEEEEEEE-CTTSCEEEEEEE
T ss_pred eEeecCCEEEEEEEEEEEeCCC-CEEEEEEEEEEEE-CCCCeEEEeehh
Confidence 555789988776543333 234 2235677788854 446899987653
No 28
>3a76_A Gamma-hexachlorocyclohexane dehydrochlorinase; barrel fold, lyase, detoxification; HET: SPD; 2.25A {Sphingomonas paucimobilis}
Probab=99.22 E-value=1.5e-10 Score=97.22 Aligned_cols=115 Identities=12% Similarity=0.160 Sum_probs=84.7
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHH-HHHHhccCcceEEEEEeEEEEEeC-C
Q 024630 143 KTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESW-EVVWMNYEFPLAIELKNVRVHVRG-N 220 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~asw-e~vfa~~~~pl~iel~dv~V~v~G-D 220 (265)
+.+|.++..+|.+|+.++|++++.++|++| +++..|+...+.|++++++.| ...+.... .....+.++.|.+.| |
T Consensus 30 ~~~I~~ll~ry~~alD~~d~d~~~~lfteD--a~~~~~~~g~~~G~~~i~~~~~~~~~~~~~-~t~H~i~n~~I~~~g~d 106 (176)
T 3a76_A 30 RAAIQDLYSDKLIAVDKRQEGRLASIWWDD--AEWTIEGIGTYKGPEGALDLANNVLWPMFH-ECIHYGTNLRLEFVSAD 106 (176)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHTTEEEE--EEEEETTTEEEEHHHHHHHHHHHTHHHHEE-EEEEEEEEEEEEESSSS
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHhhccCC--eEEEcCCCccccCHHHHHHHHHHhhhcccC-ceEEecCCeEEEEcCCC
Confidence 468889999999999999999999999998 343335433678999999999 66554322 235566778888888 9
Q ss_pred EEEEEE--EEEE-ec-CCcc-eeeEEEEEEEEEeCCeEEEEEEee
Q 024630 221 VGYVTC--IEFV-RT-KGTS-WGGQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 221 vA~Vt~--~e~v-~~-~G~~-~g~~raTnVfrR~dG~WrIVhhHa 260 (265)
.|.+++ .... .. +|.. ....+++.+|+|++|+|||.+.+.
T Consensus 107 ~A~~~~~~~~~~~~~~~~~~~~~~gry~d~l~r~dg~WrI~~r~~ 151 (176)
T 3a76_A 107 KVNGIGDVLLLGNLVEGNQSILIAAVFTDEYERRDGVWKFSKRNA 151 (176)
T ss_dssp EEEEEEEEEEEEEETGGGEEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred eEEEEEEEEEEEEecCCCceEEEEEEEEEEEEEECCEEEEEEEEE
Confidence 999864 2222 12 2222 234689999999999999999754
No 29
>2rgq_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.80A {Nostoc punctiforme} SCOP: d.17.4.25
Probab=99.21 E-value=5.2e-10 Score=90.34 Aligned_cols=119 Identities=13% Similarity=0.171 Sum_probs=90.4
Q ss_pred ccchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeC
Q 024630 140 EDSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRG 219 (265)
Q Consensus 140 ~Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~G 219 (265)
.+.+.+|.++..++..++.++|.+++.++|++|. ++..|.| ...|+++|.+.++..+.....+....+.++.|.+.|
T Consensus 6 ~~d~~~I~~l~~rya~~lD~~d~~~~~~lft~Da--~~~~~~g-~~~g~~~i~~~~~~~~~~~~~~t~H~i~n~~i~~~~ 82 (144)
T 2rgq_A 6 ALDKLEIMELAARFEMSLDKEDVENYLATFASDG--ALQGFWG-IAKGKEELRQGFYAMLDTFARGKRHCSSNAIIQGNY 82 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHTTEEEEE--EEEETTE-EEESHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHhhccCcE--EEEcCCC-CCCCHHHHHHHHHHHHhhCCCCcEEecCCeEEEEeC
Confidence 3457899999999999999999999999999984 3344543 348999999999877654322355667888898999
Q ss_pred CEEEEEEEEEEec-CCc-ceeeEEEEEEEEEeCCeEEEEEEeeC
Q 024630 220 NVGYVTCIEFVRT-KGT-SWGGQFVTNVFEKLDGQWFICIHHAS 261 (265)
Q Consensus 220 DvA~Vt~~e~v~~-~G~-~~g~~raTnVfrR~dG~WrIVhhHaS 261 (265)
|.|.+.+...+.. .+. .....+++.+|+|.+|+|||.+.+..
T Consensus 83 d~a~~~~~~~~~~~~~~~~~~~g~y~d~~~r~dg~Wri~~r~~~ 126 (144)
T 2rgq_A 83 DEATMESYLTVVNREDLNRAGSAFVKDQVRKINGKWYLILRQIE 126 (144)
T ss_dssp SEEEEEEEEEEEESSSSCEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CEEEEEEEEEEEEecCCeEEEEEEEEEEEEEECCEEEEEEEEEE
Confidence 9888876544432 221 23345889999999999999998863
No 30
>3ef8_A Putative scyalone dehydratase; YP_496742.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE PG4; 1.50A {Novosphingobium aromaticivorans DSM12444} SCOP: d.17.4.28
Probab=99.15 E-value=6e-10 Score=90.86 Aligned_cols=116 Identities=12% Similarity=0.082 Sum_probs=86.4
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeC-CE
Q 024630 143 KTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRG-NV 221 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~G-Dv 221 (265)
+.+|.++..+|..|+.++|++++.++|++|.. +..+++..+.|+++|++.|...+.... .....+.++.|.+.| |.
T Consensus 10 ~~~I~~l~~ry~~~~D~~d~~~~~~lFt~D~~--~~~~~~~~~~G~~~i~~~~~~~~~~~~-~~~H~~~n~~I~~~gdd~ 86 (150)
T 3ef8_A 10 MRAIERMMFDYSYHLDMNHPEELAALFVEDCE--VSYAPNFGATGRDAYKKTLEGIGTFFR-GTSHHNSNICIDFVSETE 86 (150)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEE--EEEETTEEEESHHHHHHHTTTHHHHEE-EEEEEEEEEEEEEEETTE
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHhhccCceE--EEccCCCCCCCHHHHHHHHHHhhcccC-ceEEecCCEEEEEcCCCE
Confidence 67899999999999999999999999999843 333333357899999998877654322 245667788888777 58
Q ss_pred EEEEEEEEEe---cCCcc--eeeEEEEEEEEEeCCeEEEEEEeeC
Q 024630 222 GYVTCIEFVR---TKGTS--WGGQFVTNVFEKLDGQWFICIHHAS 261 (265)
Q Consensus 222 A~Vt~~e~v~---~~G~~--~g~~raTnVfrR~dG~WrIVhhHaS 261 (265)
|.+.+.-.+. .++.. ....+++..|+|++|+|||.+.+..
T Consensus 87 A~~~~~~~~~~~~~~~~~~~~~~gry~d~~~r~dg~Wri~~r~~~ 131 (150)
T 3ef8_A 87 ANVRSVVLAIHRYTKERPDGILYGQYFDTVVKVDGQWKFKRRELR 131 (150)
T ss_dssp EEEEEEEEEEEEESSSSCCEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEEEEEEEccCCCCeEEEEEEEEEEEEEECCEEEEEEEEEE
Confidence 8887554332 22222 2345899999999999999998764
No 31
>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29
Probab=99.11 E-value=1.4e-09 Score=84.73 Aligned_cols=106 Identities=14% Similarity=0.087 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEEEEE
Q 024630 146 VLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVGYVT 225 (265)
Q Consensus 146 I~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA~Vt 225 (265)
..++.++|++||++||+++++++|++|..+. -.|++....|++++++.|+..+.. + .+.+++. ++.+.||.+++.
T Consensus 5 ~~~~v~~~~~a~n~~D~~~~~~~~a~D~~~~-~~~g~~~~~G~~ai~~~~~~~~~~-~-~~~~~~~--~~~~~gd~v~~~ 79 (123)
T 2k54_A 5 IELPVQKQLEAYNARDIDAFMAWWADDCQYY-AFPATLLAGNAAEIRVRHIERFKE-P-DLYGELL--TRVIVGNVVIDH 79 (123)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEEEEE-ETTTEEEEESHHHHHHHHHHHTTC-T-TCEEEEE--EEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHhcCHHHHHhhcCCceEEE-cCCCCcccCCHHHHHHHHHHHcCC-C-CcEEEEE--EEEEECCEEEEE
Confidence 4568899999999999999999999983222 235545689999999999998876 3 4666655 456889987664
Q ss_pred EEEEEecCCcceeeEEEEEEEEEeCCeEEEEEEe
Q 024630 226 CIEFVRTKGTSWGGQFVTNVFEKLDGQWFICIHH 259 (265)
Q Consensus 226 ~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVhhH 259 (265)
..-....+|.. ..+....+|+-+|| ||+.+.
T Consensus 80 ~~~~g~~~~~~-~~~~~~~vf~v~dG--kI~~~~ 110 (123)
T 2k54_A 80 ETVTRNFPEGK-GEVDVACIYEVENG--RIAKAW 110 (123)
T ss_dssp EEEECCBTTBC-CEEEEEEEEEEETT--EEEEEE
T ss_pred EEEEeECCCCc-eEEEEEEEEEEECC--EEEEEE
Confidence 43222122322 25778889999888 566554
No 32
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.02 E-value=2.7e-09 Score=101.64 Aligned_cols=120 Identities=20% Similarity=0.382 Sum_probs=99.3
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecC--CCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeC
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHP--GASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRG 219 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhP--gg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~G 219 (265)
.+.++..+.+.+.+++..||.+.+..+..++ ++++.| -|..+.|.+..+.+|+..++....+...++.+.+|++.|
T Consensus 316 ~~~e~~~~~~~~l~~i~~gD~~~y~~l~~~~--~t~fep~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~~~~~p~v~~~~ 393 (444)
T 3soa_A 316 RKQEIIKVTEQLIEAISNGDFESYTKMCDPG--MTAFEPEALGNLVEGLDFHRFYFENLWSRNSKPVHTTILNPHIHLMG 393 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSHHHHHHEEEE--EEEECGGGTTCEEEHHHHTHHHHHHTSTTCSSCCEEEEEEEEEEEET
T ss_pred chHHHHHHHHHHHhhhhcCCchhhcccCCCC--CCccCcccccccccCcchhhhhhhcccccCCCcceEeecCCceEEec
Confidence 5788999999999999999999999998764 899888 456789999999999987665446789999999999999
Q ss_pred CE-EEEEEEEEEe---cCCcc-eeeEEEEEEEEEeCCeEEEEEEeeCCC
Q 024630 220 NV-GYVTCIEFVR---TKGTS-WGGQFVTNVFEKLDGQWFICIHHASPV 263 (265)
Q Consensus 220 Dv-A~Vt~~e~v~---~~G~~-~g~~raTnVfrR~dG~WrIVhhHaSp~ 263 (265)
|. |++++..... ..|.+ +.....|.||.|.+|+|++||.|.|..
T Consensus 394 ~~~a~~~y~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~w~~~h~h~~~~ 442 (444)
T 3soa_A 394 DESACIAYIRITQYLDAGGIPRTAQSEETRVWHRRDGKWQIVHFHRSGA 442 (444)
T ss_dssp TTEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEETTEEEEEEEEEEES
T ss_pred CcceeeeeeeeeeeeccCCCccccchhhheeeeecCCceEEEEEecCCC
Confidence 76 7777653432 34443 556799999999999999999999864
No 33
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=99.01 E-value=4.9e-09 Score=79.58 Aligned_cols=109 Identities=20% Similarity=0.204 Sum_probs=79.3
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecC-CCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCE
Q 024630 143 KTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHP-GASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNV 221 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhP-gg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDv 221 (265)
.+++.++.++|++|+++||++++.++|++| ++...| ++.++.|++++++.|+..++.. + .+++.. .+.+.||.
T Consensus 4 ~~~~~~~v~~~~~a~~~~D~~~~~~l~a~D--~~~~~~~~~~~~~G~~~i~~~~~~~~~~~--~-~~~~~~-~~~~~g~~ 77 (125)
T 1ohp_A 4 PEHMTAVVQRYVAALNAGDLDGIVALFADD--ATVENPVGSEPRSGTAAIREFYANSLKLP--L-AVELTQ-EVRAVANE 77 (125)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHTTEEEE--EEEESSTTSCCEESHHHHHHHHHHHTSSC--C-EEEECS-CCEEETTE
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHcCCC--eEEECCCCCCCccCHHHHHHHHHHhcccC--c-eEEEee-eEEEeCCE
Confidence 467888999999999999999999999997 565566 4568899999999999887653 3 555551 44589998
Q ss_pred EEEEEEEEEecCCcceeeEEEEEEEEEe-CCeEEEEEEee
Q 024630 222 GYVTCIEFVRTKGTSWGGQFVTNVFEKL-DGQWFICIHHA 260 (265)
Q Consensus 222 A~Vt~~e~v~~~G~~~g~~raTnVfrR~-dG~WrIVhhHa 260 (265)
+++........+|.+ ...+.+.+|+.. +| ||+.++.
T Consensus 78 ~~~~~~~~~~~~g~~-~~~~~~~~~~~~~dG--kI~~~~~ 114 (125)
T 1ohp_A 78 AAFAFIVSFEYQGRK-TVVAPIDHFRFNGAG--KVVSMRA 114 (125)
T ss_dssp EEEEEEEEEEETTEE-EEECCEEEEEECTTS--CEEEEEE
T ss_pred EEEEEEEEEEecCce-EEEEEEEEEEECCCC--cEEEEEE
Confidence 887654333334532 235678888884 65 5555543
No 34
>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*
Probab=99.00 E-value=2.1e-08 Score=80.13 Aligned_cols=113 Identities=14% Similarity=0.158 Sum_probs=81.2
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEE
Q 024630 143 KTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVG 222 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA 222 (265)
.++..++.++|++|+++||++++.++|++| ++...|+...+.|++++++.|+..+... ++ .+++..++...||.+
T Consensus 21 ~~~~~~~v~~~~~a~~~~D~~~l~~l~a~D--~~~~~~~~~~~~G~~~i~~~~~~~~~~~--~~-~~~~~~~~~~~gd~v 95 (149)
T 1nww_A 21 STPDEKIVLEFMDALTSNDAAKLIEYFAED--TMYQNMPLPPAYGRDAVEQTLAGLFTVM--SI-DAVETFHIGSSNGLV 95 (149)
T ss_dssp CSHHHHHHHHHHHHGGGCCHHHHHTTBCSS--CEEEETTSCCEESHHHHHHHHHHHHHHE--EE-EEEEEEEEEEETTEE
T ss_pred CcCHHHHHHHHHHHHhcCCHHHHHHHhCCC--EEEEcCCCCCccCHHHHHHHHHHHHhhC--Cc-ceEEEEEEEecCCEE
Confidence 455677889999999999999999999998 4444566567899999999999988653 23 034444667899987
Q ss_pred EEEEEEEEec--CCcceeeEEEEEEEEEeCCeEEEEEEeeC
Q 024630 223 YVTCIEFVRT--KGTSWGGQFVTNVFEKLDGQWFICIHHAS 261 (265)
Q Consensus 223 ~Vt~~e~v~~--~G~~~g~~raTnVfrR~dG~WrIVhhHaS 261 (265)
++........ +|.. .......+|+-.||.+.-+..+..
T Consensus 96 ~~~~~~~~~~~~~G~~-~~~~~~~~~~~~dGkI~~~~~~~d 135 (149)
T 1nww_A 96 YTERVDVLRALPTGKS-YNLSILGVFQLTEGKITGWRDYFD 135 (149)
T ss_dssp EEEEEEEEEETTTCCE-EEEEEEEEEEEETTEEEEEEEECC
T ss_pred EEEEEEEEEEcCCCCE-EEEeeEEEEEEeCCEEEEEehhcC
Confidence 7755433322 3432 345788899999997665555543
No 35
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=99.00 E-value=4.9e-09 Score=81.39 Aligned_cols=111 Identities=16% Similarity=0.088 Sum_probs=81.3
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCC-CCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCC
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGA-SGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGN 220 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg-~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GD 220 (265)
+..++.++.++|++|+++||++++.++|++| +++..|++ .++.|++++++.|+..++..+ .+.+++. .+.+.||
T Consensus 5 ~~~~~~~~v~~~~~a~~~~D~~~l~~l~a~D--~~~~~p~~~~~~~G~~~i~~~~~~~~~~~~-~~~~~~~--~~~~~g~ 79 (131)
T 1oh0_A 5 TAQEVQGLMARYIELVDVGDIEAIVQMYADD--ATVEDPFGQPPIHGREQIAAFYRQGLGGGK-VRACLTG--PVRASHN 79 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTCHHHHHHHEEEE--EEEESSTTSCCEEHHHHHHHHHHHHHSSSC-CEEEESS--CCEECSS
T ss_pred CHHHHHHHHHHHHHHHhCCCHHHHHHHcCCC--EEEEcCCCCCCcccHHHHHHHHHHHhhccc-eeEeecc--eEEECCC
Confidence 3567888999999999999999999999997 66666754 578999999999999887643 3455554 4458999
Q ss_pred EE-EEEEEEEEecCCcceeeEEEEEEEEE-eCCeEEEEEEee
Q 024630 221 VG-YVTCIEFVRTKGTSWGGQFVTNVFEK-LDGQWFICIHHA 260 (265)
Q Consensus 221 vA-~Vt~~e~v~~~G~~~g~~raTnVfrR-~dG~WrIVhhHa 260 (265)
.| ++...-....+|.+ .......+|+. .|| ||+.++.
T Consensus 80 ~~~~~~~~~~~~~~G~~-~~~~~~~~~~~~~dG--kI~~~~~ 118 (131)
T 1oh0_A 80 GCGAMPFRVEMVWNGQP-CALDVIDVMRFDEHG--RIQTMQA 118 (131)
T ss_dssp SEEEEEEEEEEESSSSE-EEEEEEEEEEECTTS--CEEEEEE
T ss_pred eEEEEEEEEEEEeCCcE-EEEEEEEEEEECCCC--cEEhHHh
Confidence 88 76654333223432 34677888999 787 5555544
No 36
>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}
Probab=98.97 E-value=2.1e-08 Score=81.90 Aligned_cols=102 Identities=8% Similarity=0.017 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHcCCHHHHHhhhcCCCceEEecC-CCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEEEEEE
Q 024630 148 AANARFYDSFKNGDLATMQGLWARGDNVCCVHP-GASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVGYVTC 226 (265)
Q Consensus 148 aa~~afy~Af~aGDldAL~alwAdDd~V~~vhP-gg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA~Vt~ 226 (265)
++.++|++||++||++++.++|++| +++..| .+.++.|+++|++.|+.+++..+ .+.+++. .+.+.||.+++..
T Consensus 29 eiv~~y~~A~n~~D~d~~~~l~a~D--~v~~d~~~g~~~~Greai~~~~~~~~~~~~-d~~~~v~--~~~~~gd~v~~~~ 103 (158)
T 4h3u_A 29 EIVTAWAAAWTGTNPNALGTLFAAD--GTYVDHAIGATMTGREQISGWKARTDAMIE-NVHVTIT--KAYRAGDHVTIEA 103 (158)
T ss_dssp HHHHHHHHHHHSSCHHHHHTTEEEE--EEEEETTTTEEEESHHHHHHHHHHHHHHEE-EEEEEEE--EEEEETTEEEEEE
T ss_pred HHHHHHHHHHHcCCHHHHHHHhccc--ceEeccCCCceEecchhhhhhhhhhhccCC-ccceeEe--EEeecCceEEEEE
Confidence 4778999999999999999999998 555555 45678999999999988876543 2455555 5678999988876
Q ss_pred EEEEecCC-cceeeEEEEEEEEEeCCeEE
Q 024630 227 IEFVRTKG-TSWGGQFVTNVFEKLDGQWF 254 (265)
Q Consensus 227 ~e~v~~~G-~~~g~~raTnVfrR~dG~Wr 254 (265)
.......| +..-.+....+|+-+||...
T Consensus 104 ~~~gt~~~tG~~~~~~~~~v~~~~dGkI~ 132 (158)
T 4h3u_A 104 VYGGHIKGAPTPFAVPMATLLRTRGEEIT 132 (158)
T ss_dssp EEEEEETTSSSCEEEEEEEEEEEETTEEE
T ss_pred EEEEEecCccCcceeeeEEEEEEECCEEE
Confidence 55444333 23334677888999999543
No 37
>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10
Probab=98.96 E-value=1.7e-08 Score=81.32 Aligned_cols=112 Identities=13% Similarity=0.089 Sum_probs=82.2
Q ss_pred cchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCC---CCccCHHHHHHHHHHHHhccCcceEEE-EEeEEEE
Q 024630 141 DSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGA---SGISGYDPVMESWEVVWMNYEFPLAIE-LKNVRVH 216 (265)
Q Consensus 141 Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg---~~l~Gr~aI~aswe~vfa~~~~pl~ie-l~dv~V~ 216 (265)
+.++.+.++.++|++|+++||+++|.+++++| ++...|++ .++.|++++++.|+.+......++.++ +. .+.
T Consensus 9 ~~~~~~~~~~~~f~~A~~~gD~~~l~~lla~D--~v~~~pg~~~~g~~~G~~~v~~~~~~~~~~~~~~~~~~~v~--~~~ 84 (134)
T 3dmc_A 9 NTLKVAHQGFEFFTQGLATGEWQKFLDMLTED--FTFWFPMGEFHGLNVGKERAKEFFTYVSESFHTGIQISSLD--RVT 84 (134)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCHHHHTTEEEE--EEEEESSGGGBEEEESHHHHHHHHHHHHHTCTTCEEEEEEE--EEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHcCCC--EEEEecCCCCCccchhHHHHHHHHHHHHHhhcCCceeEEEE--EEE
Confidence 34667888999999999999999999999998 55556766 368899999998888776543335555 44 467
Q ss_pred EeCCEEEEEEEEEEecCCcceeeEEEEEEEEEeCCeEEEEEEe
Q 024630 217 VRGNVGYVTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICIHH 259 (265)
Q Consensus 217 v~GDvA~Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVhhH 259 (265)
+.||.+++.........| ..-...+..+|+-+||. |++.+
T Consensus 85 ~~G~~vvve~~~~g~~~g-~~y~~~~~~~f~v~dGk--I~~~r 124 (134)
T 3dmc_A 85 SNETTVVFEFRDEGLFLG-KPYKNRVAVSFDVRGDK--ICSYR 124 (134)
T ss_dssp ECSSEEEEEEEEEEEETT-EEEEEEEEEEEEEETTE--EEEEE
T ss_pred ecCCEEEEEEEEEEEEcC-cEeeccEEEEEEEECCE--EEEEE
Confidence 899988876553333445 33345778888888984 55544
No 38
>3ejv_A Uncharacterized protein with cystatin-like fold; structural genomics, joint center for ST genomics, JCSG; HET: MSE PGE; 1.40A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.28
Probab=98.96 E-value=1.3e-08 Score=86.39 Aligned_cols=120 Identities=13% Similarity=0.140 Sum_probs=84.4
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEe-cCCC-----CCccCHHHHHHHHHHHHhccC-c-ceEEEEEeE
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCV-HPGA-----SGISGYDPVMESWEVVWMNYE-F-PLAIELKNV 213 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~v-hPgg-----~~l~Gr~aI~aswe~vfa~~~-~-pl~iel~dv 213 (265)
.+.+|.++..+|..|+.++|++++.++|++|..+.+. ..++ ..+.|+++|++.++..++... + .....+.++
T Consensus 24 d~~~I~~l~~~y~~~~D~~d~d~~~~lFt~D~~~~~~~~~Gg~~g~~~~~~Gr~aI~~~~~~~~~~~~~~~~t~H~~~n~ 103 (179)
T 3ejv_A 24 DETIILNVLGQYTRAHDRRDPDAMAALFAPEATIEIVDAVGGASRSISRLEGRDAIRVAVRQMMAPHGYRAWSQNVVNAP 103 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEEEECGGGCCEEEEEEESHHHHHHHHHHSSCCCCTTEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHHHHhCCCHHHHHhhcCCceEEEEeccCCCcCCCcceecCHHHHHHHHHHhhcccccccceEEEcCCC
Confidence 3678999999999999999999999999998533221 1122 367999999998888775421 1 234666777
Q ss_pred EEEEeCCEE--EEEEE--EEEec---CCcc-----ee--------eEEEEEEEEEeCCeEEEEEEeeC
Q 024630 214 RVHVRGNVG--YVTCI--EFVRT---KGTS-----WG--------GQFVTNVFEKLDGQWFICIHHAS 261 (265)
Q Consensus 214 ~V~v~GDvA--~Vt~~--e~v~~---~G~~-----~g--------~~raTnVfrR~dG~WrIVhhHaS 261 (265)
.|.+.||.| .+.+. ..... +|.. .+ ..++...|+|++|+|||.+....
T Consensus 104 ~I~vdgD~A~~~~~~y~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~g~Y~D~~~R~dg~Wri~~r~~~ 171 (179)
T 3ejv_A 104 IIVIEGDHAVLDAQFMVFSILAAEVPDGGWPTGTFGAQGRIVPIEAGQYRLTLRTVADGWVISAMRIE 171 (179)
T ss_dssp EEEEETTEEEEEEEEEEEEEEECCCCTTCCCTTCCSCCEEEEEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEcCCeeEEEEEEEEEEEEeeccCCCCCcceeecccccccccccceEEEEEEEECCeEEEEEEEEE
Confidence 888999999 44432 12211 2321 01 12489999999999999987653
No 39
>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9
Probab=98.91 E-value=3.5e-08 Score=76.94 Aligned_cols=107 Identities=17% Similarity=0.140 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCC-------CCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEe
Q 024630 146 VLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGA-------SGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVR 218 (265)
Q Consensus 146 I~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg-------~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~ 218 (265)
-.++.++|++||++||++++.++|++| ++...|++ ....|++++++.|+..++..+ .+.+++. ++...
T Consensus 5 ~~~~v~~~~~a~~~~d~~~~~~l~a~D--~~~~~~~~~~p~~~~~~~~G~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~ 79 (132)
T 3ebt_A 5 NMQTVRESYEAFHRRDLPGVLAALAPD--VRWTHPDGMSPYGLGGTKHGHDEVIAFIRHVPTHIA-EMRLAPD--EFIES 79 (132)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEE--EEEEECGGGGGGTCCEEEEHHHHHHHHHHHGGGTEE-EEEEEEE--EEEEE
T ss_pred HHHHHHHHHHHHhccCHHHHHHhcCCC--EEEEeCCCCCCcccCCcCcCHHHHHHHHHHHHhhCC-ceEEEEe--EEEEe
Confidence 356788999999999999999999997 55555643 467899999999988876532 2455554 56789
Q ss_pred CCEEEEEEEEEEe-cCCcceeeEEEEEEEEEeCCeEEEEEEee
Q 024630 219 GNVGYVTCIEFVR-TKGTSWGGQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 219 GDvA~Vt~~e~v~-~~G~~~g~~raTnVfrR~dG~WrIVhhHa 260 (265)
||.+++.+..... ..|. .-......+|+-+|| ||+.+..
T Consensus 80 gd~v~v~~~~~~~~~~G~-~~~~~~~~v~~~~dG--kI~~~~~ 119 (132)
T 3ebt_A 80 GERIVVLGTRRVTAVNGR-SATLKFVHVWRFENG--RAVTFED 119 (132)
T ss_dssp TTEEEEEEEEEEEETTSC-EEEEEEEEEEEEETT--EEEEEEE
T ss_pred CCEEEEEEEEEEEeCCCC-EEeeeEEEEEEEECC--EEEEEEE
Confidence 9987776544332 2342 234578889998888 4555543
No 40
>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11
Probab=98.89 E-value=5.5e-08 Score=78.88 Aligned_cols=109 Identities=17% Similarity=0.110 Sum_probs=77.8
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCC----ccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCC
Q 024630 145 SVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASG----ISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGN 220 (265)
Q Consensus 145 aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~----l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GD 220 (265)
+..++.++|++|+++||++++.++|++| ++...|++.+ +.|++++++.|+...+.....+.+++. .+.+.||
T Consensus 30 ~~~~~v~~~~~a~~~gD~~~l~~l~a~D--~~~~~~~~~~~~g~~~G~~~i~~~~~~~~~~~~~~~~~~i~--~~~~~gd 105 (156)
T 1tuh_A 30 QNAETVRRGYAAFNSGDMKTLTELFDEN--ASWHTPGRSRIAGDHKGREAIFAQFGRYGGETGGTFKAVLL--HVLKSDD 105 (156)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEE--EEEEECSSSTTCEEEESHHHHHHHHHHHHHTTTTCCEEEEE--EEEECTT
T ss_pred hHHHHHHHHHHHHhCCCHHHHHHhcCCC--EEEEccCCCCccceEcCHHHHHHHHHHHHhhcCCceEEEEE--EEEEcCC
Confidence 4556788999999999999999999997 6666676544 689999999998855443213556665 4568899
Q ss_pred -EEEEEEEEEEecCCcceeeEEEEEEEEEeCCeEEEEEEee
Q 024630 221 -VGYVTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 221 -vA~Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVhhHa 260 (265)
.+++........+| .........+|+-+|| ||+.+..
T Consensus 106 ~~v~~~~~~~~~~~G-~~~~~~~~~~~~~~dG--kI~~~~~ 143 (156)
T 1tuh_A 106 GRVIGIHRNTAERGG-KRLDVGCCIVFEFKNG--RVIDGRE 143 (156)
T ss_dssp SCEEEEEEEEEEETT-EEEEEEEEEEEEEETT--EEEEEEE
T ss_pred CEEEEEEEEEEecCC-cEEeeeeEEEEEEECC--EEEEEEE
Confidence 77776544222334 3334678889999888 6665543
No 41
>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structur genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406}
Probab=98.89 E-value=2.3e-08 Score=77.59 Aligned_cols=104 Identities=10% Similarity=0.014 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEEEEEEE
Q 024630 148 AANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVGYVTCI 227 (265)
Q Consensus 148 aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA~Vt~~ 227 (265)
+...+||+||++||++++.+++++| ++.-.|++..+.|++++++.++......+ +..+++. ++...||.+++.+.
T Consensus 4 ~~v~~~~~a~~~gD~~~~~~~ladD--v~w~~~g~~~~~G~~~~~~~~~~~~~~~~-~~~~~i~--~~i~~Gd~Vvv~~~ 78 (112)
T 3f14_A 4 TTHYSIAQHFSSGDFPAVYACFNDI--IEWNIIGNQVVKGKADVIDFCNKMLPEMK-GAVLTND--NVIQNENQIVIEGK 78 (112)
T ss_dssp HHHHHHHHHHHTTCGGGTGGGEEEE--EEEEETTTEEEESHHHHHHHHHHHHHHHH-TSEEEEE--EEEECSSEEEEEEE
T ss_pred HHHHHHHHHHHcCCHHHHHHhcCCc--eEEEEcCCccEecHHHHHHHHHHHHhhcC-CcEEEEE--EEEEeCCEEEEEEE
Confidence 4678899999999999999999987 65545677778999999999988776543 2577776 46789998888766
Q ss_pred EEEec-CCcceeeEEEEEEEEEeCCeEEEEEEe
Q 024630 228 EFVRT-KGTSWGGQFVTNVFEKLDGQWFICIHH 259 (265)
Q Consensus 228 e~v~~-~G~~~g~~raTnVfrR~dG~WrIVhhH 259 (265)
-.... +| ..-......||+-+|| ||+...
T Consensus 79 ~~~~~~~g-~~~~~~~~~vf~~~dG--kI~e~~ 108 (112)
T 3f14_A 79 CRYFDAEG-KEAFVSYCDIYRFEND--TIKTIT 108 (112)
T ss_dssp EEEECTTS-CEEEEEEEEEEEEETT--EEEEEE
T ss_pred EEEEeCCC-CEEEEEEEEEEEEeCC--EEEEEE
Confidence 54333 33 2234577889999998 666544
No 42
>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20
Probab=98.84 E-value=8.2e-08 Score=77.33 Aligned_cols=109 Identities=6% Similarity=-0.055 Sum_probs=77.2
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCC-------CCccCHHHHHHHHHHHHhccCcceEEEEEeEEEE
Q 024630 144 TSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGA-------SGISGYDPVMESWEVVWMNYEFPLAIELKNVRVH 216 (265)
Q Consensus 144 ~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg-------~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~ 216 (265)
....++.++||+||++||+++|.+++++| ++...|+. ....|++++++.|+...+..+ ...+++. ++.
T Consensus 4 ~~~~~~v~~~~~a~~~gD~~~l~~l~a~D--v~~~~~g~~~~~p~~g~~~G~~av~~~~~~~~~~~~-~~~~~~~--~~~ 78 (143)
T 3dm8_A 4 HSLWRFSRALHRALNDRQTEELATIIDDN--IDWAIYGPIDMFPFFGARQGKAAVLEVCRQIADSVR-IYRYHRE--SVM 78 (143)
T ss_dssp CHHHHHHHHHHHHHHHCCCHHHHHHEEEE--EEEEEESCTTTCTTCEEEESHHHHHHHHHHHHHHEE-EEEEEEE--EEE
T ss_pred chHHHHHHHHHHHHHCCCHHHHHHhcCCC--eEEEecCCCCcCCCCccccCHHHHHHHHHHHHHhcC-cceEEEE--EEE
Confidence 45678899999999999999999999998 44443432 257899999999998776542 2345555 456
Q ss_pred EeCCEEEEEEEEEEe--cCCcceeeEEEEEEEEEeCCeEEEEEEee
Q 024630 217 VRGNVGYVTCIEFVR--TKGTSWGGQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 217 v~GDvA~Vt~~e~v~--~~G~~~g~~raTnVfrR~dG~WrIVhhHa 260 (265)
+.||.+++.+..... ..| +.-......+|+-+|| ||+.++.
T Consensus 79 ~~gd~v~v~~~~~~~~~~tG-~~~~~~~~~~~~v~dG--kI~~~r~ 121 (143)
T 3dm8_A 79 LGIDSAASMVRYSLTAAGTN-RPISVRMALFTQFQNG--RLTNLRM 121 (143)
T ss_dssp ECSSEEEEEEEEEEEETTTC-CEEEEEEEEEEEEETT--EEEEEEE
T ss_pred EcCCeEEEEEEEEEEEeCCC-CEEEEEEEEEEEEECC--EEEEEEE
Confidence 889988765444332 234 3334577888988898 5555543
No 43
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=98.82 E-value=2.3e-07 Score=72.95 Aligned_cols=104 Identities=16% Similarity=0.130 Sum_probs=73.0
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEE--EeCCEE
Q 024630 145 SVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVH--VRGNVG 222 (265)
Q Consensus 145 aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~--v~GDvA 222 (265)
...++.++|++|+++||++++.++|++| ++...|++..+.|++++++.|+.+... ....+.++.+. ..||.+
T Consensus 9 ~~~~~v~~~~~a~~~~D~~~~~~l~a~D--~~~~~p~~~~~~G~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~gd~v 82 (140)
T 3i0y_A 9 RATGLVQAYYEAFNRGDWDAMLAFLAED--VAHDLNQGPREIGRAAFASFLQRMNDS----YREQLRDIVVTANDEGTRV 82 (140)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHTEEEE--EEEECTTSCEEESHHHHHHHHHHHHHH----EEEEEEEEEEEECTTSSEE
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHcCCc--EEEEcCCCCceEcHHHHHHHHHHHhhh----cchhhhheeeeecccCCEE
Confidence 3457889999999999999999999998 554456667899999999988876643 23445555444 458887
Q ss_pred EEEEEEEEecC----C--ccee---eEEEEEEEEEeCCeEE
Q 024630 223 YVTCIEFVRTK----G--TSWG---GQFVTNVFEKLDGQWF 254 (265)
Q Consensus 223 ~Vt~~e~v~~~----G--~~~g---~~raTnVfrR~dG~Wr 254 (265)
++......... | .++| ......+|+-+||...
T Consensus 83 ~~~~~~~gt~~g~~~g~p~~tG~~~~~~~~~~~~~~dGkI~ 123 (140)
T 3i0y_A 83 GAEYVVHGVYHTTDEGLPDANGQTYVLPGGAFFDVRDGQIT 123 (140)
T ss_dssp EEEEEEEEEECSCCTTSSCCSCEEEEEEEEEEEEEETTEEE
T ss_pred EEEEEEEEEeecccCCCcCCCCCEEEEEeeEEEEEECCEEE
Confidence 77654433311 1 1233 4678889999998543
No 44
>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.80 E-value=1.2e-07 Score=74.59 Aligned_cols=107 Identities=17% Similarity=0.179 Sum_probs=77.6
Q ss_pred cchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCC----CCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEE
Q 024630 141 DSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPG----ASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVH 216 (265)
Q Consensus 141 Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPg----g~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~ 216 (265)
.+.++-.++.++|++||++||++++.++|++| ++...|+ +.++.|++++++.|+. +...+ .+.+++. .+.
T Consensus 14 m~~~~~~~~v~~~~~a~~~~D~~~l~~l~a~D--~v~~~p~~~~~g~~~~G~~~i~~~~~~-~~~~~-~~~~~i~--~~~ 87 (129)
T 3fh1_A 14 DRSEQTAEIMRRFNDVFQLHDPAALPELIAEE--CVIENTVPAPDGARHAGRQACVQLWSA-IATQP-GTRFDLE--ETF 87 (129)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCGGGHHHHEEEE--EEEECSCSTTTCCEEESHHHHHHHHHH-HHHCT-TCEEEEE--EEE
T ss_pred CCchhHHHHHHHHHHHHHccCHHHHHHhcCCC--EEEECCCCCCCCCcccCHHHHHHHHHH-HhcCC-CceEEEe--EEE
Confidence 45567788999999999999999999999997 5655553 4557999999999998 65543 2566665 456
Q ss_pred EeCCEEEEEEEEEEecCCcceeeEEEEEEEEEeCCeEEEEEEe
Q 024630 217 VRGNVGYVTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICIHH 259 (265)
Q Consensus 217 v~GDvA~Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVhhH 259 (265)
+.||.+++... ... |.+ .......+|+-.|| ||+.+.
T Consensus 88 ~~gd~v~~~~~--~~~-G~~-~~~~~~~~~~~~dG--kI~e~~ 124 (129)
T 3fh1_A 88 VAGDRATIRWR--YWM-ADG-NSVRGVNLMRVQDG--RIVEAM 124 (129)
T ss_dssp EETTEEEEEEE--EEC-TTS-CEEEEEEEEEEETT--EEEEEE
T ss_pred EcCCEEEEEEE--EEC-CCe-eEEeceEEEEEcCC--EEEEEE
Confidence 88998877553 222 322 34566778888887 455554
No 45
>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=98.80 E-value=2.6e-07 Score=74.51 Aligned_cols=108 Identities=11% Similarity=0.126 Sum_probs=79.5
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEEE
Q 024630 144 TSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVGY 223 (265)
Q Consensus 144 ~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA~ 223 (265)
.+..++..+|++|+++||++++.++|++| ++...| +....|++++++.|+..++..+ .+.+++.+ +...||.++
T Consensus 4 ~~~~~~v~~~~~a~~~~d~~~~~~~~a~D--~v~~~~-~~~~~G~~~~~~~~~~~~~~~~-~~~~~i~~--~~~~gd~v~ 77 (152)
T 2gex_A 4 TANKERCLEMVAAWNRWDVSGVVAHWAPD--VVHYDD-EDKPVSAEEVVRRMNSAVEAFP-DLRLDVRS--IVGEGDRVM 77 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEE--EEEECT-TSCEECHHHHHHHHHHHHHHCT-TCEEEEEE--EEEETTEEE
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHHcCCC--eEEeCC-CCCCCCHHHHHHHHHHHHHhCC-CcEEEEEE--EEEeCCEEE
Confidence 34556789999999999999999999997 666666 3468999999999998887643 36777664 568999888
Q ss_pred EEEEEEEecCC-----ccee---eEEEEEEEEEeC-CeEEEEEEe
Q 024630 224 VTCIEFVRTKG-----TSWG---GQFVTNVFEKLD-GQWFICIHH 259 (265)
Q Consensus 224 Vt~~e~v~~~G-----~~~g---~~raTnVfrR~d-G~WrIVhhH 259 (265)
+.........| .++| ..+...+|+-.| | ||+.+.
T Consensus 78 ~~~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~~d~G--kI~e~~ 120 (152)
T 2gex_A 78 LRITCSATHQGVFMGIAPTGRKVRWTYLEELRFSEAG--KVVEHW 120 (152)
T ss_dssp EEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEECTTS--CEEEEE
T ss_pred EEEEEEEEecCCcCCcCCCCCEEEEEEEEEEEEecCC--EEEEEE
Confidence 77654444322 1223 467888999888 7 566544
No 46
>3ff2_A Uncharacterized cystatin fold protein (YP_497570. NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.79 E-value=1.4e-07 Score=72.97 Aligned_cols=105 Identities=10% Similarity=0.048 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCC-CCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEEEEE
Q 024630 147 LAANARFYDSFKNGDLATMQGLWARGDNVCCVHPG-ASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVGYVT 225 (265)
Q Consensus 147 ~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPg-g~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA~Vt 225 (265)
.++.++|++||+++|+++++++|++| ++...|. +....|++++++.|+..++..+ .+.+++. ++.+.||.+++.
T Consensus 5 ~~~v~~~~~a~n~~D~~~~~~~~a~D--~v~h~~~~~~~~~G~~~~~~~~~~~~~~~p-~~~~~i~--~~~~~Gd~V~~~ 79 (117)
T 3ff2_A 5 LETAKAMIAAYNAQDVDTYVSYMTDD--ACEANYRGDVVREGKEGTRSGLAAAFARWP-QNHAEIK--DAQQVGTYVLMR 79 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTEEEE--EEEEETTSCEEECHHHHHHHHHHHHHHHCT-TCEEEEE--EEEEETTEEEEE
T ss_pred HHHHHHHHHHHcccCHHHHHHhcCCc--EEEEeCCCCccccCHHHHHHHHHHHHhhCC-CceEEEE--EEEEECCEEEEE
Confidence 46788999999999999999999987 5444454 4467999999999999887643 2566665 567999987775
Q ss_pred EEEEEec--CCcc-eeeEEEEEEEEEeCCeEEEEEE
Q 024630 226 CIEFVRT--KGTS-WGGQFVTNVFEKLDGQWFICIH 258 (265)
Q Consensus 226 ~~e~v~~--~G~~-~g~~raTnVfrR~dG~WrIVhh 258 (265)
..-.... +|.+ .....+..+||-+|| ||+.|
T Consensus 80 ~~~~~~~~~~G~~~~~~~~~~~ifr~~dG--kI~e~ 113 (117)
T 3ff2_A 80 EHVTRGPATDGSPLVEPFDVVAVYSFEGD--KCSRV 113 (117)
T ss_dssp EEEECCSCSSSCCCCCCEEEEEEEEEETT--EEEEE
T ss_pred EEEEecCCCCCCcccccEEEEEEEEEECC--EEEEE
Confidence 4322111 1321 134677889999988 45443
No 47
>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8
Probab=98.77 E-value=1.9e-07 Score=75.08 Aligned_cols=110 Identities=16% Similarity=0.157 Sum_probs=77.7
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEEE
Q 024630 144 TSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVGY 223 (265)
Q Consensus 144 ~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA~ 223 (265)
++..++.++|++|+++||++++.++|++| +++..|++.++.|++++++.|+..+... ...+++. .+.+.||.++
T Consensus 15 ~~~~~~v~~f~~a~~~gD~~~l~~l~a~D--~v~~~~~~~~~~G~~~i~~~~~~~~~~~--~~~~~i~--~~~~~g~~vv 88 (149)
T 2bng_A 15 TEAIRAVEAFLNALQNEDFDTVDAALGDD--LVYENVGFSRIRGGRRTATLLRRMQGRV--GFEVKIH--RIGADGAAVL 88 (149)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEE--EEEEETTTEEEECHHHHHHHHHTTTTTC--EEEEEEE--EEEEETTEEE
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHcCCC--EEEEeCCCCCccCHHHHHHHHHHHHhhc--CcEEEEE--EEEEeCCEEE
Confidence 35566788999999999999999999997 6655666677899999999998866532 3455554 5668999877
Q ss_pred EEEEEEEecCCcceeeEEEEEEEEEeCCeEEEEEEee
Q 024630 224 VTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 224 Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVhhHa 260 (265)
+........+|. ........+|+-.||...-...+.
T Consensus 89 ~~~~~~~~~~G~-~~~~~~~~~~~v~dGkI~~~~~y~ 124 (149)
T 2bng_A 89 TERTDALIIGPL-RVQFWVCGVFEVDDGRITLWRDYF 124 (149)
T ss_dssp EEEEEEEEETTE-EEEEEEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEEEEECCe-EEEEEEEEEEEEECCEEEEEEEEc
Confidence 654433333443 234577778888899554443443
No 48
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=98.77 E-value=1.6e-07 Score=76.60 Aligned_cols=109 Identities=15% Similarity=0.100 Sum_probs=75.5
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEE--EEEeCC
Q 024630 143 KTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVR--VHVRGN 220 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~--V~v~GD 220 (265)
.+++.++.++|++|+++||++++.++|++| ++.-.|.+.++.|++++++.|+..++.. ..++.++. +...||
T Consensus 19 ~~~~~~lv~~~~~a~~~~D~~~l~~l~a~D--~v~~~p~g~~~~G~e~i~~~~~~~~~~~----~~~~~~~~~~~~~~gd 92 (151)
T 3f7x_A 19 GMTATELVNAYYAAFNAGDMPAFLALLSED--VIHDINQGERQMGKARFAAFMEKMNRCY----RERLADIVVMQNADGS 92 (151)
T ss_dssp CCCHHHHHHHHHHHHHHTCHHHHHHTEEEE--EEEECTTSCEEESHHHHHHHHHHHHHHE----EEEEEEEEEEECTTSS
T ss_pred CHHHHHHHHHHHHHHHcCCHHHHHHhcCCC--EEEECCCCCCcCCHHHHHHHHHHHHHhh----ccceeEEEEEEecCCC
Confidence 356788999999999999999999999998 5544466678999999999998877642 33444432 335688
Q ss_pred EEEEEEEEEEecC----Cc--cee---eEEEEEEEEEeCCeEEEEEEe
Q 024630 221 VGYVTCIEFVRTK----GT--SWG---GQFVTNVFEKLDGQWFICIHH 259 (265)
Q Consensus 221 vA~Vt~~e~v~~~----G~--~~g---~~raTnVfrR~dG~WrIVhhH 259 (265)
.+++...-..... |- ++| ......+|+-+||. |+.+.
T Consensus 93 ~v~~~~~~~gt~~g~~~G~p~~tG~~~~~~~~~~~~~~dGk--I~~~~ 138 (151)
T 3f7x_A 93 RAAAEFTVHGQYLADDEGLPTANGQTYVLPAGAFFYIHCGK--IARVT 138 (151)
T ss_dssp EEEEEEEEEEEECSCCTTSCCCSSCEEEEEEEEEEEEETTE--EEEEE
T ss_pred EEEEEEEEEEEEeccCCCCcCCCCCEEEEEEEEEEEEECCE--EEEEE
Confidence 7776554443311 11 222 35777788888884 44443
No 49
>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10
Probab=98.76 E-value=3.8e-07 Score=72.15 Aligned_cols=109 Identities=14% Similarity=0.051 Sum_probs=76.1
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCC----CCccCHHHHH-HHHHHHHhccCcceEEEEEeEEEEE
Q 024630 143 KTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGA----SGISGYDPVM-ESWEVVWMNYEFPLAIELKNVRVHV 217 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg----~~l~Gr~aI~-aswe~vfa~~~~pl~iel~dv~V~v 217 (265)
-++-.++.++||+|+++||++++.+++++| ++...|++ ..+.|+++++ +.|+..++..+ ...+++. ++.+
T Consensus 11 m~~~~~~v~~~~~a~~~gD~~~~~~l~a~D--~~~~~~~~~p~~g~~~G~~~i~~~~~~~~~~~~~-~~~~~~~--~~~~ 85 (140)
T 3ec9_A 11 MRTPYQIVADHYAASDRHDPAAMMADIAPA--IEWTEMAGFPCAGTYRSADEIVRNVFRRLGEEWD-GYTFKLD--ALHD 85 (140)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHTTEEEE--EEEEECTTSTTCEEECSHHHHHHHTHHHHHHHEE-EEEEEEE--EEEE
T ss_pred cchHHHHHHHHHHHHhCCCHHHHHHhcCCC--eEEEEcCCCccceEEcCHHHHHHHHHHHHHhhCC-cceeEEE--EEEE
Confidence 344567889999999999999999999998 55555542 3568999996 56887776532 2455554 5568
Q ss_pred eCCEEEEEEEEEEec--CCcceeeEEEEEEEEEeCCeEEEEEEe
Q 024630 218 RGNVGYVTCIEFVRT--KGTSWGGQFVTNVFEKLDGQWFICIHH 259 (265)
Q Consensus 218 ~GDvA~Vt~~e~v~~--~G~~~g~~raTnVfrR~dG~WrIVhhH 259 (265)
.||.+++.+...... .|. .-......+|+-+|| ||+.++
T Consensus 86 ~gd~v~v~~~~~~~~~~tG~-~~~~~~~~v~~v~dG--kI~~~~ 126 (140)
T 3ec9_A 86 AGDTVIGVGRYSGTYRRTGK-SFECRVAHVWRVDAG--KIVHFE 126 (140)
T ss_dssp ETTEEEEEEEEEEEETTTCC-EEEEEEEEEEEEETT--EEEEEE
T ss_pred cCCEEEEEEEEEEEEcCCCC-EEEeEEEEEEEEECC--EEEEEE
Confidence 899888876544442 342 234577888988888 455554
No 50
>3k0z_A Putative polyketide cyclase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS lipoprotein; HET: NHE; 1.91A {Bacillus cereus}
Probab=98.75 E-value=3.5e-07 Score=75.24 Aligned_cols=109 Identities=13% Similarity=0.057 Sum_probs=80.2
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEEE
Q 024630 144 TSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVGY 223 (265)
Q Consensus 144 ~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA~ 223 (265)
++-.++..+|++||++||++++.++|++| ++...|......|++++++.|+.+++..+ .+.+++. ++...||.++
T Consensus 34 ~~n~~~v~~~~~a~~~~d~~~l~~~~a~D--~v~~~p~~g~~~G~e~~~~~~~~~~~~~p-d~~~~i~--~~~~~gd~v~ 108 (159)
T 3k0z_A 34 TEMVHAAQRFYAFWDTGKEELIPQTVTEN--FFDHTLPKGRPQGTEGLKFAAQNFRKIVP-NIHCEIE--DLLVVGDKVT 108 (159)
T ss_dssp HHHHHHHHHHHHHHHHCCGGGHHHHEEEE--EEESSCCTTCCSSHHHHHHHHHHHHTTCC-SEEEEEE--EEEEETTEEE
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHcCCC--eEEecCCCCCCCCHHHHHHHHHHHHHhCC-CcEEEEE--EEEEECCEEE
Confidence 34556788999999999999999999997 66666654578999999999988876543 3667666 5678999888
Q ss_pred EEEEEEEecCCcceeeEEEEEEEEEeCCeEEEEEEee
Q 024630 224 VTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 224 Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVhhHa 260 (265)
+.........|.+ -.+....+||-+|| ||+.+..
T Consensus 109 ~~~~~~gt~~G~~-v~~~~~~i~r~~dG--kI~e~~~ 142 (159)
T 3k0z_A 109 ARLSFTGTHNDKK-IDFFAIDILHVKDG--KITEDWH 142 (159)
T ss_dssp EEEEEEEEETTEE-EEEEEEEEEEEETT--EEEEEEE
T ss_pred EEEEEEEEECCeE-EEEEEEEEEEEECC--EEEEEEE
Confidence 7665444434432 34567788888888 5655543
No 51
>3g8z_A Protein of unknown function with cystatin-like FO; NP_639274.1, snoal-like polyketide cyclase; HET: MSE; 1.90A {Xanthomonas campestris PV}
Probab=98.74 E-value=3.3e-07 Score=74.33 Aligned_cols=111 Identities=16% Similarity=0.094 Sum_probs=78.0
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCC----CccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeC
Q 024630 144 TSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGAS----GISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRG 219 (265)
Q Consensus 144 ~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~----~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~G 219 (265)
.+-.++..+|++|+++||++++.+++++| ++...|++. .+.|++++++.|+.+++..+..+.++.. ..+.+.|
T Consensus 20 ~~n~~~v~~~~~a~~~gD~~~l~~l~a~D--~v~~~p~~~~~~g~~~G~~~v~~~~~~~~~~~~~~~~~~~i-~~~~~~g 96 (148)
T 3g8z_A 20 MNTIDIAKSYITAIQTGDHATLGSIISPD--VIWHQPGNHQFSGTHRGMAVVGPMLGKMMEVSNGTFAISRA-DDYMASG 96 (148)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHEEEE--EEEEECSSSTTCEEEESHHHHHHHHHHHHHHTTTCCEEEEE-EEEEEET
T ss_pred cchHHHHHHHHHHHhcCCHHHHHHHcCCC--EEEEcCCCCCCCceEcCHHHHHHHHHHHHHhcCCceEEEec-ceEEecC
Confidence 34456788999999999999999999997 665667654 3689999999998887654322344320 3567899
Q ss_pred CEEEEEEEEEEecCCcceeeEEEEEEEEEeCCeEEEEEEee
Q 024630 220 NVGYVTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 220 DvA~Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVhhHa 260 (265)
|.+++.........|.+ -......+|+-+|| ||+.+..
T Consensus 97 d~v~v~~~~~~~~~G~~-~~~~~~~v~~~~dG--kI~e~~~ 134 (148)
T 3g8z_A 97 DWVAITLEFSGQANGVT-LKQAGVDLLRIEDG--KIVEVRL 134 (148)
T ss_dssp TEEEEEEEEEEEETTEE-EEEEEEEEEEEETT--EEEEEEE
T ss_pred CEEEEEEEEEEEeCCcE-EEeeEEEEEEEECC--EEEEEEE
Confidence 98877654443334432 33467888998888 5666543
No 52
>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0
Probab=98.73 E-value=1.7e-07 Score=73.49 Aligned_cols=109 Identities=11% Similarity=-0.008 Sum_probs=76.6
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCC----CccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeC
Q 024630 144 TSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGAS----GISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRG 219 (265)
Q Consensus 144 ~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~----~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~G 219 (265)
.+-.++.++|++|+++||++++.++|++| ++...|++. .+.|++++++.|+.++...+ ...+++ .++.+.|
T Consensus 5 ~~~~~~v~~~~~a~~~~d~~~~~~l~a~D--~~~~~p~~~p~~g~~~G~~~i~~~~~~~~~~~~-~~~~~~--~~~~~~g 79 (135)
T 3fgy_A 5 QENVQIVKDFFAAMGRGDKKGLLAVSAED--IEWIIPGEWPLAGTHRGHAALAALLQKASEMVE-ISYPEP--PEFVAQG 79 (135)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHTEEEE--EEEEECSSSTTCEEEEHHHHHHHHHHHHHHHEE-EECSSC--CEEEEET
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHhcCCC--eEEEEcCCCccceEEeCHHHHHHHHHHHHHhhC-cceeee--EEEEEcC
Confidence 45567889999999999999999999998 555556532 46899999999988876532 123333 3557889
Q ss_pred CEEEEEEEEEEe--cCCcceeeEEEEEEEEEeCCeEEEEEEee
Q 024630 220 NVGYVTCIEFVR--TKGTSWGGQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 220 DvA~Vt~~e~v~--~~G~~~g~~raTnVfrR~dG~WrIVhhHa 260 (265)
|.+++....... ..|. .-......+|+-+|| ||+.++.
T Consensus 80 d~v~v~~~~~~~~~~~G~-~~~~~~~~~~~~~dG--kI~~~~~ 119 (135)
T 3fgy_A 80 ERVLVVGFATGRVKSTNR-TFEDDWVFAITVRKS--KVTSIRE 119 (135)
T ss_dssp TEEEEEEEEEEEETTTCC-EEEEEEEEEEEEETT--EEEEEEE
T ss_pred CEEEEEEEEeEEEcCCCC-EecccEEEEEEEECC--EEEEEEE
Confidence 988776544333 2342 234567788988888 6766653
No 53
>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10
Probab=98.73 E-value=1.2e-07 Score=75.36 Aligned_cols=113 Identities=13% Similarity=0.071 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecC---CC-C-CccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeC
Q 024630 145 SVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHP---GA-S-GISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRG 219 (265)
Q Consensus 145 aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhP---gg-~-~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~G 219 (265)
+..++.++|++|+++||++++.++|++| +++..| .| + .+.|++++++.|+..+...+ ...+....+.+.+.|
T Consensus 11 ~~~~~v~~~~~a~~~~D~~~l~~l~a~D--~~~~~p~~~~g~~~~~~G~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g 87 (150)
T 1s5a_A 11 KACETLRKFMAYMLEKDMKSWTELWDEN--AVFEFPYAPEGSPKRIEGKAAIYDYIKDYPKQIH-LSSFTAPTVYRSADS 87 (150)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEE--EEEECTTCCTTSCSEEESHHHHHHHHTTHHHHEE-EEEECCCEEEEBSSS
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHhCCCC--EEEEeecCCCCCCccccCHHHHHHHHHHhhhcCC-cccceeEEEEEecCC
Confidence 5677889999999999999999999997 555665 23 2 47999999999988876532 123311223445788
Q ss_pred CEEEEEEEEEEe--cCCcceeeEEEEEEEEEeCCeEEEEEEeeC
Q 024630 220 NVGYVTCIEFVR--TKGTSWGGQFVTNVFEKLDGQWFICIHHAS 261 (265)
Q Consensus 220 DvA~Vt~~e~v~--~~G~~~g~~raTnVfrR~dG~WrIVhhHaS 261 (265)
|.+++....... .+|.+ .......+|+.+||.|.-+..+..
T Consensus 88 d~v~~~~~~~~~~~~~G~~-~~~~~~~~~~~~dGkI~~~~~~~d 130 (150)
T 1s5a_A 88 NTVIAEFQCDGHVIETGLP-YRQSYISVIETRDGRIVRYRDYWN 130 (150)
T ss_dssp SEEEEEEEEEEEETTTCCB-CCCEEEEEEEEETTEEEEEEEEEC
T ss_pred CEEEEEEEEEEEEcCCCCE-EEEEEEEEEEEeCCEEEEEEEeeC
Confidence 988876554433 34432 246778899999997666555544
No 54
>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9
Probab=98.73 E-value=5e-07 Score=73.58 Aligned_cols=107 Identities=12% Similarity=0.138 Sum_probs=78.6
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEEEE
Q 024630 145 SVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVGYV 224 (265)
Q Consensus 145 aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA~V 224 (265)
+..++..+|++|+++||++++.++|++| ++...|+ ...|++++++.|+..++..+ .+.+++.+ +.+.||.+++
T Consensus 5 ~~~~~v~~~~~a~~~~D~~~~~~~~a~D--~v~~~p~--~~~G~~~~~~~~~~~~~~~~-~~~~~i~~--~~~~gd~v~~ 77 (158)
T 2gey_A 5 ERKALCLEMVAAWNRWDLSGIIKHWSPD--IVHYSED--NEVSSADMVKLMEGGLKAFP-DLQLEVKS--IMAEEDRVAL 77 (158)
T ss_dssp HHHHHHHHHHHHHHTTCTHHHHTTEEEE--EEEEETT--EEECHHHHHHHHHHHHHHST-TCEEEEEE--EEEETTEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHcCCC--eEEeCCC--CCCCHHHHHHHHHHHHHhCC-CcEEEEEE--EEEeCCEEEE
Confidence 4556788999999999999999999997 5555553 57899999999998887643 36777764 5789998887
Q ss_pred EEEEEEecCC-----ccee---eEEEEEEEEEeCCeEEEEEEee
Q 024630 225 TCIEFVRTKG-----TSWG---GQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 225 t~~e~v~~~G-----~~~g---~~raTnVfrR~dG~WrIVhhHa 260 (265)
.........| .++| ......+|+-+|| ||+.+..
T Consensus 78 ~~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~~dG--kI~e~~~ 119 (158)
T 2gey_A 78 RITVTATHQGEFMGVQPTGQRVSWHLVEELRFVDG--KVVEHWD 119 (158)
T ss_dssp EEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEETT--EEEEEEE
T ss_pred EEEEEEEecCCCCCcCCCCCEEEEEEEEEEEEECC--EEEEEEE
Confidence 7654433222 1233 3578889999988 6775543
No 55
>3g16_A Uncharacterized protein with cystatin-like fold; YP_001022489.1, protein of unknown function with cystatin-LI structural genomics; HET: MSE; 1.45A {Methylibium petroleiphilum PM1}
Probab=98.72 E-value=1.8e-07 Score=78.82 Aligned_cols=80 Identities=11% Similarity=0.191 Sum_probs=62.4
Q ss_pred ccchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCC---CCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEE
Q 024630 140 EDSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPG---ASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVH 216 (265)
Q Consensus 140 ~Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPg---g~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~ 216 (265)
..+.+.+.++.++|++||++||+++|+++|++| ++...|. +.+..|+++|++.|+.++... ..++++.. +.
T Consensus 6 ~Ms~~~~~~~v~ry~~A~n~gD~d~l~~l~aeD--~v~~~p~~~p~~~~~Greai~~~f~~~~~~~--d~~~~~e~--i~ 79 (156)
T 3g16_A 6 TLSRAAMEKVIRTYYDGCNEADEAKMIACFVPE--AVHYFPAGMYGGAFRGAAQIAHRWRTAVETL--GSYWTIDA--LV 79 (156)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCHHHHHTTEEEE--EEEECBTTSTTSCEESHHHHHHHHHHHHHHH--CEEEEEEE--EE
T ss_pred cccchhHHHHHHHHHHHHHcCCHHHHHHhcCCC--EEEecCCCCCCCCccCHHHHHHHHHHHHhhc--CceEEEEE--EE
Confidence 456788999999999999999999999999998 4433243 456799999999999988764 35665554 45
Q ss_pred Ee--CCEEEEE
Q 024630 217 VR--GNVGYVT 225 (265)
Q Consensus 217 v~--GDvA~Vt 225 (265)
+. |+.|++.
T Consensus 80 v~~dG~~av~E 90 (156)
T 3g16_A 80 IDAETAEAAIE 90 (156)
T ss_dssp EETTTTEEEEE
T ss_pred EecCCCEEEEE
Confidence 55 8988753
No 56
>3blz_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.75A {Shewanella baltica} SCOP: d.17.4.14
Probab=98.71 E-value=2.1e-07 Score=73.85 Aligned_cols=110 Identities=13% Similarity=0.213 Sum_probs=67.3
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhcc-Ccc-eEEEEEeEEEEEeC
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNY-EFP-LAIELKNVRVHVRG 219 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~-~~p-l~iel~dv~V~v~G 219 (265)
.+++|.++..+|.+|+.++|.++|.++|++|....+..++|. +.+ ..+.+..+.+.... ..| ...++ ..|.+.|
T Consensus 10 d~~aI~~~~~~y~~a~~~~D~~~l~~~f~~da~~~~~~~~g~-~~~-~~~~~~~~~~~~~~~~~~~~~~~i--~~i~i~g 85 (128)
T 3blz_A 10 EYHAIVEVLSKYNEGGKKADSTIMRPAFSSQATIFGVDVDNK-LTG-GPIQGLFDVIDNVFHPSPEAKAAI--ARIDIVG 85 (128)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHGGGEEEEEEEEEECTTSC-EEE-EETHHHHHHHHHTCCCCTTCEEEE--EEEEEET
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHhhCCCcEEEEEeCCCc-EEe-cCHHHHHHHHHhcCCCCccccCeE--EEEEEEC
Confidence 467999999999999999999999999999855544332332 222 22333223232220 112 23333 3466788
Q ss_pred CEEEEEEEEEEecCCcceeeEEEEEEEEEeCCeEEEEEEe
Q 024630 220 NVGYVTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICIHH 259 (265)
Q Consensus 220 DvA~Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVhhH 259 (265)
|.|.+..... ...| +...-...|+|++|+|||++.-
T Consensus 86 d~A~a~~~~~-~~~~---~~~~d~~~l~k~dg~WkI~~~~ 121 (128)
T 3blz_A 86 TAASARIDTD-DISG---FRFTDFFNLLKVEGKWTVVSKI 121 (128)
T ss_dssp TEEEEEEEEE-EETT---EEEEEEEEEEEETTEEEEEEEE
T ss_pred CEEEEEEEEE-EcCC---CceEEeEEEEEECCEEEEEEEE
Confidence 9999865432 1122 2222222688999999998653
No 57
>4gb5_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, snoal-like domain, unknown function; HET: PGE; 1.55A {Kribbella flavida}
Probab=98.69 E-value=3.2e-07 Score=74.72 Aligned_cols=118 Identities=6% Similarity=0.044 Sum_probs=84.8
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHH-HhhhcCCCceEEecC---CCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEE
Q 024630 142 SKTSVLAANARFYDSFKNGDLATM-QGLWARGDNVCCVHP---GASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHV 217 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL-~alwAdDd~V~~vhP---gg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v 217 (265)
.+.+|.++..+|..++.++|.+.+ .++|++|..+ .+.+ ......|++++.+.|...+.... ....-+.++.|.+
T Consensus 9 Dr~~I~~L~~rY~~~~D~~d~~~l~~~~ft~Da~~-d~~~~~g~~~~~~g~~~~~~~~~~~~~~~~-~t~H~~~n~~I~v 86 (159)
T 4gb5_A 9 DRAEIIELFGRYADIADLKEFTDLPRRVHTDPLTI-DFESVTGMPPMTVPLSDYGAALRASFGAFS-ATHHAITGHVVTI 86 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSSHHHHHEEEEEEE-ECHHHHCCCCEEECHHHHHHHHHHHHTTCS-EEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHhhCcCCEEE-EecCCCCCcccccHHHHHHHHHHHhccCCc-eEEEecCCceEEE
Confidence 477999999999999999999876 5799997322 2222 22346799999999988876543 2456667788889
Q ss_pred eCCEEEEEEEEEE--ec------CCcc--eeeEEEEEEEEEeCCeEEEEEEeeC
Q 024630 218 RGNVGYVTCIEFV--RT------KGTS--WGGQFVTNVFEKLDGQWFICIHHAS 261 (265)
Q Consensus 218 ~GDvA~Vt~~e~v--~~------~G~~--~g~~raTnVfrR~dG~WrIVhhHaS 261 (265)
.||.|.+.+.-.. .. ++.. ....++...|+|++|+|||.+..-.
T Consensus 87 dgD~A~~~~~~~a~~~~~~~~~~~~~~~~~~~G~Y~d~~~r~~g~Wri~~r~~~ 140 (159)
T 4gb5_A 87 DSDRATIHAHVRAEHWLPAEVAGDGPDRWLVVGFYDNEAVRTADGWRLSSVKLT 140 (159)
T ss_dssp ETTEEEEEEEEEEEEECCHHHHTTSCCEEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred cCCEEEEEEEEEEEEeeccccCCCCceEEEEEEEEEEEEEEECCEEEEEEEEEE
Confidence 9999887643221 11 2222 2235889999999999999987654
No 58
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=98.64 E-value=1.8e-07 Score=72.96 Aligned_cols=103 Identities=16% Similarity=0.188 Sum_probs=73.9
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCC--------CCCccCHHHHHHHHHHHHhccCcceEEEEEeE
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPG--------ASGISGYDPVMESWEVVWMNYEFPLAIELKNV 213 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPg--------g~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv 213 (265)
+.+++.++.++|++||+++|+++++++|++| +++..|. +..+.|+++|++.|+..++..+ .+.+++.+
T Consensus 6 ~~~~~~~~~~~~~~a~n~~D~~~l~~l~a~D--~v~~~p~~~~~~g~~~~~~~G~~ai~~~~~~~~~~~~-~~~~~~~~- 81 (122)
T 3h3h_A 6 TQAFAQQFSREWIDAWNAHDLDAILSHYADG--FEMSSPMIVQIAGEPSGRLRGKEQVGAYWREALRMIP-DLHFEWIA- 81 (122)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHTTEEEE--EEEECHHHHHHHC-CCCEEEHHHHHHHHHHHHHHHCT-TCCCEEEE-
T ss_pred CHHHHHHHHHHHHHHHhccCHHHHHHhcCCC--EEEECCCcccccCCCCCcEEcHHHHHHHHHHHHHHCC-CcEEEEEE-
Confidence 4567888999999999999999999999998 5555552 3678999999999999987654 35666654
Q ss_pred EEEEeCCEEEEEEEEEEecCCcceeeEEEEEEEEE-eCCeEEEEEEe
Q 024630 214 RVHVRGNVGYVTCIEFVRTKGTSWGGQFVTNVFEK-LDGQWFICIHH 259 (265)
Q Consensus 214 ~V~v~GDvA~Vt~~e~v~~~G~~~g~~raTnVfrR-~dG~WrIVhhH 259 (265)
+..+++...+.+. ..+|. ++..+|+- .||. |+.+.
T Consensus 82 -~~~~~~~~~~~~~---~~~G~-----~~~~~~~~~~dGk--I~~~~ 117 (122)
T 3h3h_A 82 -TLAGVDSVAIHYR---GAKGR-----LALEVFHFGPDRR--VVKAL 117 (122)
T ss_dssp -EEECSSEEEEEEE---CGGGC-----EEEEEEEECTTSS--EEEEE
T ss_pred -EEecCcEEEEEEE---CCCCC-----EEEEEEEECCCCc--EEEEE
Confidence 3466776555443 22332 23778888 6774 44443
No 59
>1sjw_A Nogalonic acid methyl ester cyclase; anthracyclines, nogalamycin, snoal, aldol condensation, LYAS structural genomics; HET: NGV; 1.35A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=98.59 E-value=5.2e-07 Score=71.35 Aligned_cols=108 Identities=16% Similarity=0.121 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCc-cCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEEEEE
Q 024630 147 LAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGI-SGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVGYVT 225 (265)
Q Consensus 147 ~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l-~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA~Vt 225 (265)
.++..+|++|+++||++++.++|++| ++...|++... .|++++++.|+..++..+..+.+++. ++...||.+++.
T Consensus 5 ~~~v~~~~~a~~~~d~~~~~~~~a~d--~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~gd~v~~~ 80 (144)
T 1sjw_A 5 TEIVRRMVSAFNTGRTDDVDEYIHPD--YLNPATLEHGIHTGPKAFAQLVGWVRATFSEEARLEEV--RIEERGPWVKAY 80 (144)
T ss_dssp HHHHHHHHHHHHHCCCTTGGGTEEEE--EECGGGGGGTCCSHHHHHHHHHHHHHHHHCTTCEEEEE--EEEEETTEEEEE
T ss_pred HHHHHHHHHHHhCCCHHHHHHHcCcC--eEEccCCCCCCCCCHHHHHHHHHHHHHhCCCCcEEEEE--EEEEeCCEEEEE
Confidence 45778899999999999999999997 55555654444 89999999998877654313667766 456899987776
Q ss_pred EEEEEecCC-----ccee---eEEEEEEEEEeCCeEEEEEEee
Q 024630 226 CIEFVRTKG-----TSWG---GQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 226 ~~e~v~~~G-----~~~g---~~raTnVfrR~dG~WrIVhhHa 260 (265)
........| .++| .+....+|+-+|| ||+.+..
T Consensus 81 ~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~~dG--kI~~~~~ 121 (144)
T 1sjw_A 81 LVLYGRHVGRLVGMPPTDRRFSGEQVHLMRIVDG--KIRDHRD 121 (144)
T ss_dssp EEEEEECCSCBTTBCCCCCEEEEEEEEEEEEETT--EEEEEEE
T ss_pred EEEEEEecCCCCCcCCCCCEEEEEEEEEEEEECC--EEEEEEE
Confidence 554433222 1223 3577788888888 5665543
No 60
>3hk4_A MLR7391 protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, lyase; HET: MSE; 1.96A {Mesorhizobium loti}
Probab=98.58 E-value=2.4e-06 Score=69.53 Aligned_cols=110 Identities=13% Similarity=0.013 Sum_probs=76.0
Q ss_pred hhhHHHHHHHHHHHHHcCCH-HHHHhhhcCCCceEEecCCCC---CccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEe
Q 024630 143 KTSVLAANARFYDSFKNGDL-ATMQGLWARGDNVCCVHPGAS---GISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVR 218 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDl-dAL~alwAdDd~V~~vhPgg~---~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~ 218 (265)
-..+.++.++|++++++||. ++++++|++| ++...|.++ ...|++++++.++.+.++.+ -..+++. .+.+.
T Consensus 19 ~~~~kevv~r~~e~~~~gd~~~~l~~lya~D--~v~~dp~~~~~~~~~G~eai~~~~~~~~~~~~-~~~~~i~--~~~v~ 93 (136)
T 3hk4_A 19 GMTIAEIAKDFTELLKQGDNAGAAEKYNADD--IASYEAMEGPMAVSHGKEALRQKSQWWQENHE-VHGGSVE--GPYVN 93 (136)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHEEEE--EEEECSSCSTTSEEESHHHHHHHHHHHHHTEE-EEEEEEE--EEEEE
T ss_pred cccHHHHHHHHHHHHHcCCcHHHHHHHCCCC--EEEEcCCCCCccccCCHHHHHHHHHHHHhcCC-eeeeeec--ceEEc
Confidence 35677889999999999997 6899999997 776777443 47999999998876555422 1234554 45688
Q ss_pred CCEEEEEEEEEEecC-CcceeeEEEEEEEEEeCCeEEEEEEe
Q 024630 219 GNVGYVTCIEFVRTK-GTSWGGQFVTNVFEKLDGQWFICIHH 259 (265)
Q Consensus 219 GDvA~Vt~~e~v~~~-G~~~g~~raTnVfrR~dG~WrIVhhH 259 (265)
||.+++......+.. ++..-.+....||+=.|| ||+.+.
T Consensus 94 gd~v~v~~~~~gth~~tG~~i~~~~i~v~rv~DG--kIv~~r 133 (136)
T 3hk4_A 94 GDQFALRFKFDVTPKATGERVTMDEVGLYTVKNG--KITEER 133 (136)
T ss_dssp TTEEEEEEEEEEEETTTCCCEEEEEEEEEEEETT--EEEEEE
T ss_pred CCEEEEEEEEEEEECCCCcEEEEEEEEEEEEECC--EEEEEE
Confidence 998777654433322 223344677778888888 566553
No 61
>3grd_A Uncharacterized NTF2-superfamily protein; NP_977240.1, NTF2-superfamily protein with unknown function, structural genomics; HET: MSE; 1.25A {Bacillus cereus atcc 10987} SCOP: d.17.4.0
Probab=98.57 E-value=1.7e-07 Score=73.49 Aligned_cols=109 Identities=10% Similarity=0.028 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCC----CccCHHHHHH-HHHHHHhccCcceEEEEEeEEEEEeCC
Q 024630 146 VLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGAS----GISGYDPVME-SWEVVWMNYEFPLAIELKNVRVHVRGN 220 (265)
Q Consensus 146 I~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~----~l~Gr~aI~a-swe~vfa~~~~pl~iel~dv~V~v~GD 220 (265)
-.++.++||+|+++||++++.+++++| ++...|++. ...|++++++ .|+.+....+ ...+++.+++....||
T Consensus 6 ~~~~v~~~~~a~~~~D~~~~~~l~a~D--~~~~~~~~~p~~g~~~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gd 82 (134)
T 3grd_A 6 NLEIIRSTYEGSASSNAKHLAEALSEK--VEWTEAEGFPYGGTYIGVEAIMENVFSRLGSEWN-DYKASVNMYHEVSGKD 82 (134)
T ss_dssp HHHHHHTTTSSCHHHHHHHHHHHEEEE--EEEEECTTSTTCEEEESHHHHHHHTHHHHHHHEE-EEEEEEEEEEEBTTSS
T ss_pred HHHHHHHHHHHHhcCCHHHHHHhcCCC--eEEEecCCcccCcEEeCHHHHHHHHHHHHHhhcc-ccccchhheeeecCCC
Confidence 356778899999999999999999998 555445432 4689999985 6777665432 2556666554467889
Q ss_pred EEEEEEEEEEe--cCCcceeeEEEEEEEEEeCCeEEEEEEee
Q 024630 221 VGYVTCIEFVR--TKGTSWGGQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 221 vA~Vt~~e~v~--~~G~~~g~~raTnVfrR~dG~WrIVhhHa 260 (265)
.+++.+..... ..|. .-......+|+-+|| ||+.++.
T Consensus 83 ~v~v~~~~~~~~~~tG~-~~~~~~~~v~~~~dG--kI~~~~~ 121 (134)
T 3grd_A 83 VIIAEGMYSGVYKDTGK-SFEAEFVHVWQLENG--KIVKFKQ 121 (134)
T ss_dssp EEEEEEEEEEEETTTCC-EEEEEEEEEEEEETT--EEEEEEE
T ss_pred EEEEEEEEeeEECCCCC-EeeeeEEEEEEEECC--EEEEEEE
Confidence 87776554443 2343 234678889998888 5665543
No 62
>3f8h_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 2.00A {Silicibacter SP}
Probab=98.55 E-value=1.6e-06 Score=70.70 Aligned_cols=104 Identities=15% Similarity=0.116 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEE--eCCEEEEE
Q 024630 148 AANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHV--RGNVGYVT 225 (265)
Q Consensus 148 aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v--~GDvA~Vt 225 (265)
++.++||+||+++|++++.++|++| ++.-.|.+..+.|++++++.|+..++.. + -.+.++.+.+ .||.+.+.
T Consensus 22 ~~v~~~~~a~n~~D~~~l~~l~a~D--~v~~~~~~~~~~G~e~i~~~~~~~~~~~--~--~~~~~~~~~~~~~gd~v~~~ 95 (150)
T 3f8h_A 22 DTIARYFDAFNAGDTDGMLACLSED--VAHHVNEGNIRVGKEKFAAFCAHMSHCY--K--EELTDMVIFATPDATRAAAE 95 (150)
T ss_dssp CHHHHHHHHHHHTCHHHHHTTEEEE--EEEEEETTEEEESHHHHHHHHHHHHHHE--E--EEEEEEEEEECTTSSEEEEE
T ss_pred HHHHHHHHHHHccCHHHHHHHcCCC--eEEeCCCCcceeCHHHHHHHHHHHHHhC--C--ccccceEEEEecCCCEEEEE
Confidence 4678899999999999999999998 4432344557899999999998877653 2 2455555443 57877665
Q ss_pred EEEEEecCC------ccee---eEEEEEEEEEeCCeEEEEEEe
Q 024630 226 CIEFVRTKG------TSWG---GQFVTNVFEKLDGQWFICIHH 259 (265)
Q Consensus 226 ~~e~v~~~G------~~~g---~~raTnVfrR~dG~WrIVhhH 259 (265)
..-.....| .++| .++...+|+-+|| ||+.++
T Consensus 96 ~~~~gt~~g~~~G~p~~tG~~v~~~~~~~~~~~dG--kI~~~~ 136 (150)
T 3f8h_A 96 YTVNGTYLATDEGLPEARQQSYKLPAGSFFDLRDG--LITRVT 136 (150)
T ss_dssp EEEEEEECSCCTTSCCCSSEEEEEEEEEEEEEETT--EEEEEE
T ss_pred EEEEEEEecCCCCCcCCCCCEEEEeeeEEEEEeCC--EEEEEE
Confidence 433322111 1233 3678889999998 455544
No 63
>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20
Probab=98.54 E-value=2e-06 Score=68.55 Aligned_cols=103 Identities=15% Similarity=0.203 Sum_probs=72.8
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecC-CCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEE
Q 024630 144 TSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHP-GASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVG 222 (265)
Q Consensus 144 ~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhP-gg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA 222 (265)
++..++.++|++||++||++++.+||++| +++-.| .+..+.|++++.+.+...... ...+++. ++...||.+
T Consensus 5 ~~~~~~v~~~~~a~~~~D~~~l~~llaeD--~v~~~P~~~~~~~Gr~~~~~~~~~~~~~---~~~~~i~--~~~a~G~~v 77 (128)
T 3en8_A 5 EKIREALNAHWQASAAGDFDAEHDIYDDD--AICDYPQSGERILGRMNLQALRSHHPGK---PAGFEVR--RIQGEGNLW 77 (128)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHTTTEEEE--EEEEETTTTEEEESHHHHHHHHHHTTCS---CSEEEEE--EEEEETTEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhcCCC--EEEECCCCCCEEECHHHHHHHHHHCCCC---CcceEEE--EEEECCCEE
Confidence 46678899999999999999999999997 444335 456789999999866543221 1235554 457999988
Q ss_pred EEEEEEEEecCCcceeeEEEEEEEEEeCCeEEEEEEee
Q 024630 223 YVTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 223 ~Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVhhHa 260 (265)
++..... .+| ....+..||+-.|| ||++...
T Consensus 78 v~~~~~~--~~g---~~~~~~~v~~v~dG--kI~~~~~ 108 (128)
T 3en8_A 78 ITEYSIS--YNG---RPAYTVSIMEFRNG--KVVHETQ 108 (128)
T ss_dssp EEEEEEE--ETT---EEEEEEEEEEEETT--EEEEEEE
T ss_pred EEEEEEe--cCC---EEEEEEEEEEEcCC--EEEEEEE
Confidence 8776532 333 24567778888888 4665543
No 64
>3fka_A Uncharacterized NTF-2 like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.69A {Silicibacter pomeroyi dss-3}
Probab=98.52 E-value=8e-07 Score=70.65 Aligned_cols=104 Identities=10% Similarity=0.082 Sum_probs=67.7
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccC---cceEEEEEeEEEEEe
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYE---FPLAIELKNVRVHVR 218 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~---~pl~iel~dv~V~v~ 218 (265)
.+++|.++..+|.+++.+||.+.|.++|.+|..+..+. +|....+ .+.+... +...+. .+...++. .|.+.
T Consensus 7 d~~aI~~~l~~Y~~g~~~~D~~~l~~~FhpdA~~~~~~-~g~~~~~--~~~~~~~-v~~~p~~~~~~~~~~i~--~I~i~ 80 (120)
T 3fka_A 7 HIAALTALVETYVMAMTRGDRPALERIFFGKASEVGHY-EGELLWN--SRDAFIA-MCEDAADAETDPFWAIS--SVSVQ 80 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEEEE-TTEEEEE--EHHHHHH-HHHHHCCSSCCCCEEEE--EEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHhhCCCCeEEEEec-CCcEEEc--CHHHHHh-hcCCccCCCCCceEEEE--EEEEE
Confidence 47789999999999999999999999999997666554 3332222 2323222 221111 11233444 45678
Q ss_pred CCEEEEEEEEEEecCCcceeeEEEEEEE--EEeCCeEEEEEE
Q 024630 219 GNVGYVTCIEFVRTKGTSWGGQFVTNVF--EKLDGQWFICIH 258 (265)
Q Consensus 219 GDvA~Vt~~e~v~~~G~~~g~~raTnVf--rR~dG~WrIVhh 258 (265)
||+|.+...... .| .+.|+-| .|.||+|||++-
T Consensus 81 gd~A~a~v~~~~--~~-----~~f~D~~~L~k~dg~WkIv~K 115 (120)
T 3fka_A 81 GDIAMLHVENDW--AG-----MRFDDFLTVLLHEGSWRIVSK 115 (120)
T ss_dssp TTEEEEEEEEEE--TT-----EEEEEEEEEEEETTEEEEEEE
T ss_pred CCEEEEEEEEEc--CC-----CceEEEEEEEEeCCEEEEEEE
Confidence 999999765322 22 2445555 999999999974
No 65
>2f99_A Aklanonic acid methyl ester cyclase, AKNH; anthracycline,polyketide cyclase,stereoselectivity, aklavino biosynthetic protein; HET: AKV; 1.90A {Streptomyces galilaeus} SCOP: d.17.4.9 PDB: 2f98_A*
Probab=98.52 E-value=1.4e-06 Score=70.68 Aligned_cols=111 Identities=14% Similarity=0.113 Sum_probs=78.1
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCC-ccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCE
Q 024630 143 KTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASG-ISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNV 221 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~-l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDv 221 (265)
+.+-.++..+||+||++||++++.++|++| ++...|++.. +.|++++++.|+..++..+..+.+++.+ +...||.
T Consensus 10 ~~~~~~~v~~~~~a~~~~d~~~~~~~~a~D--~v~~~p~~~~~~~G~~~~~~~~~~~~~~~p~d~~~~i~~--~~~~gd~ 85 (153)
T 2f99_A 10 RSEQIAAVRRMVEAYNTGKTDDVADYIHPE--YMNPGTLEFTSLRGPELFAINVAWVKKTFSEEARLEEVG--IEERADW 85 (153)
T ss_dssp CCHHHHHHHHHHHHHHHCCCTTGGGTEEEE--EECGGGTTTCCCCHHHHHHHHHHHHHHHHCTTCEEEEEE--EEEETTE
T ss_pred hhHHHHHHHHHHHHHhCCCHHHHHHhcCCC--eEEecCCCCCCCCCHHHHHHHHHHHHHHCCCCcEEEEEE--EEEeCCE
Confidence 345566778999999999999999999997 5555565444 5899999999998876543136777664 5688998
Q ss_pred EEEEEEEEEecCCc-----cee---eEEEEEEEEEeCCeEEEEEEe
Q 024630 222 GYVTCIEFVRTKGT-----SWG---GQFVTNVFEKLDGQWFICIHH 259 (265)
Q Consensus 222 A~Vt~~e~v~~~G~-----~~g---~~raTnVfrR~dG~WrIVhhH 259 (265)
+++.........|. ++| .+....+|+-+|| ||+.+.
T Consensus 86 v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~v~dG--kI~e~~ 129 (153)
T 2f99_A 86 VRARLVLYGRHVGEMVGMAPTGRLFSGEQIHLLHFVDG--KIHHHR 129 (153)
T ss_dssp EEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEETT--EEEEEE
T ss_pred EEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEEECC--EEEEEE
Confidence 77765544332221 233 3577888888888 565544
No 66
>3kkg_A Putative snoal-like polyketide cyclase; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, lyase; HET: MSE PGE; 1.40A {Jannaschia SP}
Probab=98.49 E-value=2.5e-06 Score=68.16 Aligned_cols=109 Identities=15% Similarity=0.199 Sum_probs=77.9
Q ss_pred hHHHHHHHHHH-HHHcCC--HHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCE
Q 024630 145 SVLAANARFYD-SFKNGD--LATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNV 221 (265)
Q Consensus 145 aI~aa~~afy~-Af~aGD--ldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDv 221 (265)
+-.++..+||+ |+++|| ++++.++|++| ++...++.....|++++++.|+..++..+ .+.+++. ++...||.
T Consensus 10 ~n~~~v~~~~~~~~~~~d~~~~~~~~~~a~d--~~~~~~~~~~~~G~~~~~~~~~~~~~~~p-d~~~~i~--~~~~~gd~ 84 (146)
T 3kkg_A 10 QNVETVLRLFDEGWGAQDGWRDVWRETMTPG--FRSIFHSNQAVEGIEQAIAFNAVLFEGFP-RLEVVVE--NVTVEGDN 84 (146)
T ss_dssp CHHHHHHGGGTTTSTTSTTHHHHHHHHEEEE--EEEEETTSCCEESHHHHHHHHHHHHHHST-TCEEEEE--EEEEETTE
T ss_pred HHHHHHHHHHHHHHcCCCcHHHHHHHHcCCC--eEEecCCCCCCCCHHHHHHHHHHHHHhCC-CceeEEE--EEEEeCCE
Confidence 34567888999 999999 99999999997 55442433678999999999998876643 3677766 45688998
Q ss_pred EEEEEEEEEecCCc-----cee---eEEEEEEEEEeCCeEEEEEEee
Q 024630 222 GYVTCIEFVRTKGT-----SWG---GQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 222 A~Vt~~e~v~~~G~-----~~g---~~raTnVfrR~dG~WrIVhhHa 260 (265)
+++.........|. ++| ......+|+-+|| ||+.++.
T Consensus 85 v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~~dG--kI~e~~~ 129 (146)
T 3kkg_A 85 VVVQARLTGAQDGPFLGVPPSGQMVDVPDVTLFTLADG--QVIEMRY 129 (146)
T ss_dssp EEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEETT--EEEEEEE
T ss_pred EEEEEEEEEEecCccCCcCCCCCEEEEEEEEEEEEECC--EEEEEEE
Confidence 88776544443221 233 3577888998887 5666543
No 67
>3duk_A NTF2-like protein of unknown function; structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.20A {Methylobacillus flagellatus KT} SCOP: d.17.4.0
Probab=98.46 E-value=2.3e-06 Score=68.48 Aligned_cols=108 Identities=13% Similarity=0.161 Sum_probs=68.2
Q ss_pred ccchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccC-cceEEEEEeEEEEEe
Q 024630 140 EDSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYE-FPLAIELKNVRVHVR 218 (265)
Q Consensus 140 ~Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~-~pl~iel~dv~V~v~ 218 (265)
...+.+|.++..+|.+++.+||.+.|.++|.+|..+.++. +|..+.+. .+.+....+.+..+ ...+.++. .+.+.
T Consensus 8 ~~d~~aI~~~l~~y~~g~~~~D~~~l~~~f~pda~~~~~~-~G~~l~~~-~~~e~~~~v~~~~p~~~~~~~I~--~I~i~ 83 (125)
T 3duk_A 8 VDDIDGITEVLNVYMNAAESGTGEEMSAAFHKDATIFGYV-GDKLAFNG-PIKDLYDWHNSNGPAKNVQSRIT--NIDIV 83 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHGGGEEEEEEEEEEE-TTEEEEEE-ETHHHHHHHHHHCCCTTCEEEEE--EEEEE
T ss_pred ccHHHHHHHHHHHHHHHHHhcCHHHHHHhCCCCcEEEEEc-CCCEEeeC-CHHHHHHHHhccCCCCcccceEE--EEEEE
Confidence 3457889999999999999999999999999996665544 33312221 22222223332112 22344444 56678
Q ss_pred CCEEEEEEEEEEecCCcceeeEEEEEE--EEEeCCeEEEEE
Q 024630 219 GNVGYVTCIEFVRTKGTSWGGQFVTNV--FEKLDGQWFICI 257 (265)
Q Consensus 219 GDvA~Vt~~e~v~~~G~~~g~~raTnV--frR~dG~WrIVh 257 (265)
||+|.+...-. ...| .+.|+. +.|.||+|||++
T Consensus 84 gd~A~a~v~~~-~~~~-----~~f~D~l~L~k~dg~WkIv~ 118 (125)
T 3duk_A 84 GTVAHARVEAE-NWTN-----FKFSDLFLLLKLDGKWTIVN 118 (125)
T ss_dssp TTEEEEEEEEE-CSSS-----CCEEEEEEEEEETTEEEEEE
T ss_pred CCEEEEEEEEE-EcCC-----CeEEEEEEEEEeCCEEEEEE
Confidence 99999975322 1222 133444 499999999986
No 68
>3f9s_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative; 1.76A {Acidithiobacillus ferrooxidans atcc 23}
Probab=98.46 E-value=5e-06 Score=66.21 Aligned_cols=110 Identities=12% Similarity=0.092 Sum_probs=77.3
Q ss_pred hhHHHHHHHHHH-HHHcCCHHHHHhhhcCCCceE-EecCC---CCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEe
Q 024630 144 TSVLAANARFYD-SFKNGDLATMQGLWARGDNVC-CVHPG---ASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVR 218 (265)
Q Consensus 144 ~aI~aa~~afy~-Af~aGDldAL~alwAdDd~V~-~vhPg---g~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~ 218 (265)
.+-.++..+|++ +|+++|++++.++|++| ++ ...|+ .....|++++++.|+..++..+ .+.+++. ++...
T Consensus 6 ~~~~~~v~~~~~~~~~~~d~~~~~~~~a~d--~~~~~~p~~~~~g~~~G~~~~~~~~~~~~~~~p-d~~~~i~--~~~~~ 80 (146)
T 3f9s_A 6 SKAKEILTQFTREVWSEGNIEASDKYIAPK--YTVLHDPGDPWEGRELDVAGYKERVKTLRAAFP-DQCFDIQ--GLFAD 80 (146)
T ss_dssp TTHHHHHHHHHHHHTTTCCGGGHHHHEEEE--EEEEECTTCTTTTCEECHHHHHHHHHHHHHHST-TCEEEEE--EEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHcCCC--eeeccCCCCCCCCCcCCHHHHHHHHHHHHhhCC-CcEEEEE--EEEEe
Confidence 345667888995 99999999999999997 55 44563 2467899999999988876653 3667666 45688
Q ss_pred CCEEEEEEEEEEecCC-----ccee---eEEEEEEEEEeCCeEEEEEEee
Q 024630 219 GNVGYVTCIEFVRTKG-----TSWG---GQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 219 GDvA~Vt~~e~v~~~G-----~~~g---~~raTnVfrR~dG~WrIVhhHa 260 (265)
||.+++.........| .++| ......+||-+|| ||+.+..
T Consensus 81 gd~v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~~dG--kI~e~~~ 128 (146)
T 3f9s_A 81 GDAVVMTWLWTATHKEDIPGFPSTGKQIKMSGATVYYFDGN--RLTGHWQ 128 (146)
T ss_dssp TTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEEET--EEEEEEE
T ss_pred CCEEEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEEECC--EEEEEEE
Confidence 9987776554443222 1233 3567788888887 4655543
No 69
>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10
Probab=98.44 E-value=8.9e-07 Score=72.72 Aligned_cols=108 Identities=12% Similarity=0.046 Sum_probs=73.1
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCC---C--CCccCHHHHHHHHHHHHhccCcceEEEEEeEEEE--
Q 024630 144 TSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPG---A--SGISGYDPVMESWEVVWMNYEFPLAIELKNVRVH-- 216 (265)
Q Consensus 144 ~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPg---g--~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~-- 216 (265)
+...++.++|++|+++||++++.++|++| ++...|. | ..+.|+++|++.|+..++..+ . . +.++.+.
T Consensus 23 ~~~~~~v~~~~~a~~~~D~~~l~~l~a~D--~v~~~P~~~~g~~~~~~G~~ai~~~~~~~~~~~~--~-~-~~~~~~~~~ 96 (163)
T 1z1s_A 23 MNAKEILVHSLRLLENGDARGWCDLFHPE--GVLEFPYAPPGWKTRFEGRETIWAHMRLFPEHLT--V-R-FTDVQFYET 96 (163)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHTEEEE--EEEECSSCCTTSCCEEESHHHHHHTTTTGGGTEE--E-E-ECCCEEECC
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHCCCC--EEEECcCCCCCCCcccCCHHHHHHHHHHHHHhCc--c-c-eeeeEEEEE
Confidence 34566788999999999999999999998 5555552 2 247899999998887765422 1 1 3333333
Q ss_pred EeCCEEEEEEEEEEe--cCCcceeeEEEEEEEEEeCCeEEEEEEee
Q 024630 217 VRGNVGYVTCIEFVR--TKGTSWGGQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 217 v~GDvA~Vt~~e~v~--~~G~~~g~~raTnVfrR~dG~WrIVhhHa 260 (265)
..||.+++....... ..|. .-......+|+-.|| ||+.+..
T Consensus 97 ~~g~~vv~~~~~~g~~~~tG~-~~~~~~~~v~~v~dG--kI~~~~~ 139 (163)
T 1z1s_A 97 ADPDLAIGEFHGDGVATVSGG-KLAQDYISVLRTRDG--QILLYRD 139 (163)
T ss_dssp SSTTEEEEEEEEEEEETTTCC-EEEEEEEEEEEEETT--EEEEEEE
T ss_pred eCCCEEEEEEEEEEEEeCCCC-EEccceEEEEEecCC--EEEEEEe
Confidence 668877776554433 2342 234567778888888 6666654
No 70
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=98.43 E-value=1.6e-06 Score=78.51 Aligned_cols=112 Identities=17% Similarity=0.121 Sum_probs=83.0
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCC-CCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCC
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPG-ASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGN 220 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPg-g~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GD 220 (265)
+.+++.++.++|++++++||++++.++|++| +++..|. ..++.|+++|++.|+..++... .+++..+...+.|+
T Consensus 4 ~~~~~~~~v~~~~~~~~~~D~~~l~~l~a~D--av~~~P~~~~~~~Gr~ai~~~~~~~~~~~~---~~~~~~~~~~~~G~ 78 (283)
T 3rga_A 4 AETVRKEVALEYCRRVNAGELEGVLQLFAPD--ARLVDPLGTEPVVGRAALAARLAPALRGAV---HEEPGRPYAAHDGT 78 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHTCHHHHHHTEEEE--EEEECSSSSCCEESHHHHHHHHHHHHHTTC---EEEECCCBCCSSSS
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHhcCCC--EEEECCCCCCCcCcHHHHHHHHHHHHhhcC---ceEEEEEEeeeeCC
Confidence 3567888999999999999999999999998 6666674 5578999999999999887642 45555443337788
Q ss_pred EEEEEEEEEEecCCcce---eeEEEEEEEEEe-CCeEEEEEEee
Q 024630 221 VGYVTCIEFVRTKGTSW---GGQFVTNVFEKL-DGQWFICIHHA 260 (265)
Q Consensus 221 vA~Vt~~e~v~~~G~~~---g~~raTnVfrR~-dG~WrIVhhHa 260 (265)
.+++.........|.+. ..+....+||-. +| ||+.++.
T Consensus 79 ~v~~~~~~~~~~~g~~~g~~v~~~gi~v~r~d~dG--kI~~~rd 120 (283)
T 3rga_A 79 SVVLPATVTVGAPGAPPQRRGRTRVMGVIEVGEDG--LIREMRV 120 (283)
T ss_dssp EEEEEEEEEECSTTCCGGGCEEEEEEEEEEECTTS--CEEEEEE
T ss_pred EEEEEEEEEEEeCCCCccceEEEEEEEEEEECCCC--cEEEEEE
Confidence 88887665555444432 246778888884 56 6776643
No 71
>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406}
Probab=98.41 E-value=6.3e-06 Score=64.54 Aligned_cols=99 Identities=11% Similarity=0.132 Sum_probs=69.4
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEEE
Q 024630 144 TSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVGY 223 (265)
Q Consensus 144 ~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA~ 223 (265)
.+-.++.++|++|+++||++++.+++++| +++..|++ .+.|++++.+.+..++. .+++. .+.+.|+.++
T Consensus 6 ~~~~~~v~~f~~A~~~gD~~~l~~lla~D--vv~~~~~g-~~~G~~~v~~~~~~~~~------~~~~~--~~~~~G~~v~ 74 (114)
T 3f40_A 6 ITTRDLVLEFIHALNTENFPAAKKRLNEN--FTFNGPMG-HREGSERYMNDMEKMKF------KYVVH--KMFEEGNDVC 74 (114)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHTEEEE--EEEEETTE-EEESHHHHHHHHHHHCC------EEEEE--EEEEETTEEE
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHhcCCC--eEEECCCC-cccCHHHHHHHHHHHHh------heEEE--EEEecCCcEE
Confidence 34567888999999999999999999997 77666765 67999999988776543 34444 4568899877
Q ss_pred EEEEEEEecCCcceeeEEEEEEEEEeCCeEEEEEEee
Q 024630 224 VTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 224 Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVhhHa 260 (265)
+... ....|.. ..+..+|+-+|| ||+..+.
T Consensus 75 ~~~~--~~~~g~~---~~~~~~~~v~dG--rI~~i~~ 104 (114)
T 3f40_A 75 LIYD--INMNGKT---IAASGLYHLEKG--EITSLHV 104 (114)
T ss_dssp EEEE--EEETTEE---EEEEEEEEEETT--EEEEEEE
T ss_pred EEEE--EecCCcE---eecceEEEEcCC--eEEEEEE
Confidence 6432 2222322 455666777788 5655543
No 72
>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}
Probab=98.36 E-value=4.2e-06 Score=65.34 Aligned_cols=105 Identities=10% Similarity=-0.015 Sum_probs=75.2
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEEEE
Q 024630 145 SVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVGYV 224 (265)
Q Consensus 145 aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA~V 224 (265)
+..++..+||+|++++|++++.++|++| ++. | + ...|++++++.|+..++..+ .+.+++. .+...||.+++
T Consensus 4 ~~~~~v~~~~~~~~~~d~~~~~~~~a~d--~~~-~-~--~~~G~~~~~~~~~~~~~~~p-d~~~~i~--~~~~~gd~v~~ 74 (128)
T 3ehc_A 4 TLNDIYLAYLDSLNHQAFDELGTFVDDN--VEH-N-G--RPFGLSGYRDMLVKDFADIP-DLRFEAE--ILVSDATRLAA 74 (128)
T ss_dssp CHHHHHHHHHHHHHTTCGGGGGGTEEEE--EEE-T-T--BCCHHHHHHHHHHHHHHHCT-TCCCCEE--EEEECSSEEEE
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHhcCcc--eEe-C-C--CCCCHHHHHHHHHHHHhhCC-CceEEEE--EEEEECCEEEE
Confidence 3456888999999999999999999987 443 4 2 56899999999998876543 3566665 45678998777
Q ss_pred EEEEEEecCC-----ccee---eEEEEEEEEEeCCeEEEEEEee
Q 024630 225 TCIEFVRTKG-----TSWG---GQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 225 t~~e~v~~~G-----~~~g---~~raTnVfrR~dG~WrIVhhHa 260 (265)
.........| .++| .+....+||-+|| ||+.+..
T Consensus 75 ~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~~dG--kI~e~~~ 116 (128)
T 3ehc_A 75 RLFFDCTPKSIFMDLPVNGRRVQFCEHVFYDFEQA--KIRRVWS 116 (128)
T ss_dssp EEEEEECCSSEETTEECTTCCEEEEEEEEEEEETT--EEEEEEE
T ss_pred EEEEEEEEcCcccCCCCCCCEEEEEEEEEEEEeCC--EEEEEEE
Confidence 6554443222 1223 3567788988888 6776654
No 73
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=98.34 E-value=7e-06 Score=74.22 Aligned_cols=111 Identities=12% Similarity=0.035 Sum_probs=78.0
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCC-CCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCC
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPG-ASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGN 220 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPg-g~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GD 220 (265)
+.+++.++.++|++|+++||++++.+||++| +++..|. ..++.|+++|++.|+..+++ . .........+...|+
T Consensus 136 ~~~~~~~~v~~~~~a~~~~D~~~l~~l~a~D--~v~~~P~~~~~~~G~~ai~~~~~~~~~~-~--~~~~~~~~~~~~~g~ 210 (283)
T 3rga_A 136 DEERRKELAREHCLRINDGDVDGLLKLYSPR--IRFEDPVGSWTRTGLEALRAHATMAVGS-N--VRETAGLTVAGQDGR 210 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHTTEEEE--EEEESSTTSCEEESHHHHHHHHHHHHHT-T--CEEEEEEEEECTTSS
T ss_pred ChHHHHHHHHHHHHHHHcCCHHHHHHhcCCC--eEEECCCCCCcccCHHHHHHHHHHhhcc-C--cEEEEeeEEecCCCC
Confidence 3567888999999999999999999999998 6666674 45789999999999998876 2 233333222125688
Q ss_pred EEEEEEEEEEe---------cC-----------CcceeeEEEEEEEEEe-CCeEEEEEEe
Q 024630 221 VGYVTCIEFVR---------TK-----------GTSWGGQFVTNVFEKL-DGQWFICIHH 259 (265)
Q Consensus 221 vA~Vt~~e~v~---------~~-----------G~~~g~~raTnVfrR~-dG~WrIVhhH 259 (265)
.|++...-... .. ++..-.+....+|+-. +| ||+.+.
T Consensus 211 ~aa~~~~~~~~y~~~g~~~~~~g~~~~~~p~~~~G~~~~~~g~~~~~~~~dG--kI~~~r 268 (283)
T 3rga_A 211 HAAVTVSATMDYLPSGPLLARHHLMTLPAPADPHRALIGIEYVMVIGVDADG--LIDEMR 268 (283)
T ss_dssp EEEEEEEEEEESTTHHHHHHHTTSCCSCCCSCTTTCEEEEEEEEEEEECTTS--CEEEEE
T ss_pred EEEEEEEEEEEeecccccccccccccccCCcCCCCceEEEEEEEEEEECCCc--cEEEEE
Confidence 88887554543 01 1122346777778875 56 566663
No 74
>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}
Probab=98.33 E-value=5.4e-06 Score=67.83 Aligned_cols=103 Identities=15% Similarity=0.087 Sum_probs=74.4
Q ss_pred hhHHHHHHHHHH-HHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEE
Q 024630 144 TSVLAANARFYD-SFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVG 222 (265)
Q Consensus 144 ~aI~aa~~afy~-Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA 222 (265)
.+-.++..+||+ +|++||++++.+++++| ++.-.|+. ..|++++++.|+..++..+ .+.+++. ++.+.||.+
T Consensus 27 ~~nk~lV~~f~~~a~~~~D~~~~~~~~a~D--~v~h~P~~--~~G~e~~~~~~~~~~~~~p-d~~~~i~--~iiaeGD~V 99 (148)
T 3g0k_A 27 QANHDLVIEMYNKVLIAMDSSAVDRYIAPG--YVQHSSLA--EPSVEALKGFLDRVRAESP-DARQTIH--RSFVDGDHV 99 (148)
T ss_dssp HHHHHHHHHHHHHTTTTTCGGGGGGTEEEE--EEECCSSS--CSSHHHHHHHHHHHHHHCC-SCEEEEE--EEEEETTEE
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHhcCcC--eEEcCCCC--CCCHHHHHHHHHHHHHhCC-CceEEEE--EEEEECCEE
Confidence 445567888998 99999999999999987 55444543 4899999999998886543 3566665 567899988
Q ss_pred EEEEEEEEecCCcceeeEEEEEEEEEeCCeEEEEEE
Q 024630 223 YVTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICIH 258 (265)
Q Consensus 223 ~Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVhh 258 (265)
++........+| .......+||-+|| ||+-|
T Consensus 100 ~~~~~~~~~~~g---~~~~~~difr~~dG--kIvEh 130 (148)
T 3g0k_A 100 ITHTHVERWPGD---AGLAVVDIFRVEGG--MIVEH 130 (148)
T ss_dssp EEEEEEECSTTC---CCEEEEEEEEEETT--EEEEE
T ss_pred EEEEEEEECCCC---ccEEEEEEEEEECC--EEEEE
Confidence 876653321222 14678889999988 55543
No 75
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=98.30 E-value=4.2e-06 Score=68.18 Aligned_cols=99 Identities=13% Similarity=0.055 Sum_probs=70.5
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCC-CCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCE
Q 024630 143 KTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPG-ASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNV 221 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPg-g~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDv 221 (265)
-.+..+..++|++|+++||++++.++|++| +++..|. +.++.|+++|++.|...+... + .+++....+...|+.
T Consensus 8 ~~~~~~~~~~~~~a~~~~D~~~l~~l~a~D--~v~~~P~~~~~~~G~~~v~~~~~~~~~~~--~-~f~~~~~~~~~dg~~ 82 (143)
T 3mso_A 8 EANAAATLAEWHGLIARRDLSGLPRLLHPD--AVFRSPMAHKPYAGAPVVSMILNTVLTVF--E-DFAYHRQLASADGRS 82 (143)
T ss_dssp CHHHHHHHHHHHHHHHTTCCTTGGGGEEEE--EEEECSSCSSCEESHHHHHHHHHHHHHHC--E-EEEEEEEEEETTSSE
T ss_pred cHHHHHHHHHHHHHHhcCCHHHHHHhcCCC--EEEECCCCCCCccCHHHHHHHHHHHHhhC--C-ceEEEEEEEccCCCE
Confidence 346788899999999999999999999997 7777775 467899999999999988763 2 455553322225666
Q ss_pred EEEEEEEEEecCCcceeeEEEEEEEEEe-CC
Q 024630 222 GYVTCIEFVRTKGTSWGGQFVTNVFEKL-DG 251 (265)
Q Consensus 222 A~Vt~~e~v~~~G~~~g~~raTnVfrR~-dG 251 (265)
+++.....+ +|. .+....+++-. ||
T Consensus 83 ~~~~f~~~~--~g~---~v~Gv~v~~~~~dG 108 (143)
T 3mso_A 83 VVLEFSARV--GER---ELKGIDMIRFDDDG 108 (143)
T ss_dssp EEEEEEEEE--TTE---EEEEEEEEEECTTS
T ss_pred EEEEEEEEE--CCE---EEEEEEEEEECCCC
Confidence 666554332 342 45556667764 55
No 76
>3er7_A Uncharacterized NTF2-like protein; YP_001812677.1, NTF2-like protein of unknown function, struc genomics; HET: MSE; 1.50A {Exiguobacterium sibiricum 255-15} SCOP: d.17.4.24
Probab=98.24 E-value=2.7e-06 Score=69.16 Aligned_cols=109 Identities=15% Similarity=0.110 Sum_probs=74.5
Q ss_pred HHHHHHHHHHH-----cCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEE
Q 024630 148 AANARFYDSFK-----NGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVG 222 (265)
Q Consensus 148 aa~~afy~Af~-----aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA 222 (265)
++.++|++.+. .||++++.+||++| +++ .+++....|+++|++.|+.+++..+ .+.+.+....+...||.+
T Consensus 6 ~~v~ry~~~~d~~~~d~~d~~~l~~Lfa~D--av~-~~~~~~~~G~~ai~~F~~~~~~a~~-~~~~~~~~~v~~~~gd~~ 81 (131)
T 3er7_A 6 TTLDRYFDLFDASRTDEKAFDDLISLFSDE--ITF-VLNGQEQHGIDAWKQFVRMVFTANQ-DIKHMYAGWVPSETGDTM 81 (131)
T ss_dssp CHHHHHHHHHHHTTTCHHHHHHHHHTEEEE--EEE-EETTEEEESHHHHHHHHHHHHHHEE-EEEEEECCCEECSSTTCE
T ss_pred HHHHHHHHHHhhccCCccCHHHHHHHhCCC--eEe-cCCCCCcCChHHHHHHHHHHHhhCc-CceEEEEEEEEecCCCEE
Confidence 36678888886 36799999999998 444 4455678999999999999886532 234444432224477766
Q ss_pred EEEEEEEEe-cCCcceeeEEEEEEEEEe-CCeEEEEEEeeCCC
Q 024630 223 YVTCIEFVR-TKGTSWGGQFVTNVFEKL-DGQWFICIHHASPV 263 (265)
Q Consensus 223 ~Vt~~e~v~-~~G~~~g~~raTnVfrR~-dG~WrIVhhHaSp~ 263 (265)
.+...-... .+| ..-.+....|++-. || ||+.+++.+-
T Consensus 82 ~~~w~~~g~~~~G-~~~~~~g~dv~~fd~dG--kI~~~~~~~d 121 (131)
T 3er7_A 82 ETRWAVCGKSADG-SVFTQDGTDIARLNADG--KIVYLANVPD 121 (131)
T ss_dssp EEEEEEEEEETTS-CEEEEEEEEEEEECTTS--CEEEEEEEEC
T ss_pred EEEEEEEEEECCC-CEEEEeeeEEEEEcCCC--cEEEEEEccC
Confidence 655443333 334 33457888899998 55 8888887754
No 77
>3dxo_A Uncharacterized snoal-like protein; putative isomerase of the snoal-like family; HET: MSE PGE; 2.70A {Agrobacterium tumefaciens str} SCOP: d.17.4.19
Probab=98.22 E-value=3.6e-05 Score=60.40 Aligned_cols=106 Identities=14% Similarity=0.089 Sum_probs=74.8
Q ss_pred hHHHHHHHHHHHHHcCCHH----HHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCC
Q 024630 145 SVLAANARFYDSFKNGDLA----TMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGN 220 (265)
Q Consensus 145 aI~aa~~afy~Af~aGDld----AL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GD 220 (265)
.+.++.++|.+||+++|.+ ++.++|++| +++..|.+. +.|+++|.+.|...+++.+ ..++++.. .+...++
T Consensus 4 ~~~~~v~ry~~aw~~~d~~~~~~~l~~l~a~D--~~~~dP~~~-~~G~~ai~~~~~~~~~~~~-~~~f~~~~-~~~~~~~ 78 (121)
T 3dxo_A 4 QHLTIAQTYLAAWNEEDNERRRHLVGQAWAEN--TRYVDPLMQ-GEGQQGIAAMIEAARQKFP-GYRFVLAG-TPDGHGN 78 (121)
T ss_dssp HHHHHHHHHHHHHHCSCHHHHHHHHHHHEEEE--EEEECSSCE-EEHHHHHHHHHHHHHHHST-TCEEEEEE-EEEEETT
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHhcCCC--eEEECCCCC-cCCHHHHHHHHHHHHHHCC-CcEEEEcc-CcceeCC
Confidence 4678899999999999985 799999997 777788764 9999999999999887654 35666651 3456777
Q ss_pred EEEEEEEEEEecCCcceeeEEEEEEEEEe-CCeEEEEEEee
Q 024630 221 VGYVTCIEFVRTKGTSWGGQFVTNVFEKL-DGQWFICIHHA 260 (265)
Q Consensus 221 vA~Vt~~e~v~~~G~~~g~~raTnVfrR~-dG~WrIVhhHa 260 (265)
.|... +.+...|+. .......+++-. +| ||+.+..
T Consensus 79 ~~~~~--w~~~~~~g~-~~~~G~d~l~~~~dG--rI~~~~~ 114 (121)
T 3dxo_A 79 FTRFS--WRLISPDGD-DVAGGTDVVSLNTEG--RIDNVVG 114 (121)
T ss_dssp EEEEE--EEEECTTSC-EEEEEEEEEEECTTS--SEEEEEE
T ss_pred EEEEE--EEEeCCCCC-ceeeEEEEEEECCCC--CEEEEEE
Confidence 75554 333332222 235666677776 66 4555543
No 78
>2b1x_B Naphthalene dioxygenase small subunit; rieske non-heme iron oxygenase, oxidoreductase; 2.00A {Rhodococcus SP} SCOP: d.17.4.4 PDB: 2b24_B
Probab=98.18 E-value=7e-05 Score=62.21 Aligned_cols=119 Identities=13% Similarity=-0.057 Sum_probs=80.8
Q ss_pred cchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCC-------------C---ccCHHHHHHHHHHHHh----
Q 024630 141 DSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGAS-------------G---ISGYDPVMESWEVVWM---- 200 (265)
Q Consensus 141 Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~-------------~---l~Gr~aI~aswe~vfa---- 200 (265)
+.+.+|.+...++..++..+|.+++.++|++|.. +..|... . ..|++.+.+....+..
T Consensus 10 ~~~~~I~~ll~rya~~lD~~d~d~w~~lft~D~~--y~~p~~~~~~~~~~~d~~~~~~~~~~~~~~l~~rv~~l~~~~~~ 87 (172)
T 2b1x_B 10 TTVREITEWLYMEAELLDAGKYREWLALVTEDLS--YVVPIRVTREREAVTDVVEGMTHMDDDADSMEMRVLRLETEYAW 87 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEE--EEEEEECCCCTTSSCCEEEEEEEEEECHHHHHHHHHHHTSSCCG
T ss_pred HHHHHHHHHHHHHHHHHhccCHHHHHHhccCCEE--EEEEeecccccccccCCCcccEEEeCCHHHHHHHHHHHhcCccc
Confidence 4577899999999999999999999999999843 3223110 0 1377888775544432
Q ss_pred --ccCcceEEEEEeEEEEEeC--CEEEEEEEEEEe-c--CC-c-ceeeEEEEEEEEEeCCeEEEEEEeeC
Q 024630 201 --NYEFPLAIELKNVRVHVRG--NVGYVTCIEFVR-T--KG-T-SWGGQFVTNVFEKLDGQWFICIHHAS 261 (265)
Q Consensus 201 --~~~~pl~iel~dv~V~v~G--DvA~Vt~~e~v~-~--~G-~-~~g~~raTnVfrR~dG~WrIVhhHaS 261 (265)
.+......-+.++.|.+.| |.|.+.+...+. . ++ . .....++...|+|.+|+|||......
T Consensus 88 ~~~p~~~t~H~i~n~~I~~~~~~d~a~~~s~~~~~~~~~~~~~~~~~~G~y~D~l~r~~g~Wri~~R~v~ 157 (172)
T 2b1x_B 88 AEDPPSRSRHFVTNVRVATGDSEDEFKVTSNLLLYRTRGDVATYDVLSGERTDVLRRAGDSFLMAKRVVL 157 (172)
T ss_dssp GGSSCCEEEEEEEEEEEEECSSTTEEEEEEEEEEEEECTTCSCCEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred ccCCCCeEEEEecCEEEEEecCCCEEEEEEEEEEEEEcCCCCceEEEEEEEEEEEEEcCCEEEEEEEEEE
Confidence 1112234567788888866 788887655443 2 23 1 12245888899999999999987654
No 79
>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}
Probab=98.08 E-value=6e-05 Score=63.25 Aligned_cols=93 Identities=17% Similarity=0.138 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecC-CCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEEEEE
Q 024630 147 LAANARFYDSFKNGDLATMQGLWARGDNVCCVHP-GASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVGYVT 225 (265)
Q Consensus 147 ~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhP-gg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA~Vt 225 (265)
.+..++|++|+++||++++++++++| +++..| ...++.|++++.+.|..++... + .++.. ...+.|+-+++.
T Consensus 21 ~~~v~~f~~A~~~gD~~aL~~LlA~D--vv~~sP~~~~p~~Gr~av~~~l~~~~~~~--~-df~~~--~~~v~G~~avl~ 93 (155)
T 3flj_A 21 HPTIARMQEVVAKGDESLIHALLAED--VRFMPPTYYKTWTGRDPVAAVLGHVGQVF--S-EFRYR--RIMGEGKDWALE 93 (155)
T ss_dssp CHHHHHHHHHHTTTCHHHHHTTEEEE--EEEECSSSSCCEESHHHHHHHHHHHHHHE--E-EEEEE--EEEEETTEEEEE
T ss_pred HHHHHHHHHHHHhCCHHHHHHhcCCC--EEEECCCCCCCcCCHHHHHHHHHHHHhhC--C-CcEEE--EEEEcCCEEEEE
Confidence 45788999999999999999999997 777777 4567899999999999887643 1 33333 345789987775
Q ss_pred EEEEEecCCcceeeEEEEEEEEE-eCC
Q 024630 226 CIEFVRTKGTSWGGQFVTNVFEK-LDG 251 (265)
Q Consensus 226 ~~e~v~~~G~~~g~~raTnVfrR-~dG 251 (265)
..-. .+| ..+....+++- +||
T Consensus 94 f~~~--~~g---~~v~gvd~~~fdedG 115 (155)
T 3flj_A 94 FQCK--VGE---LDAVGVDLITLNEGG 115 (155)
T ss_dssp EEEE--ETT---EEEEEEEEEEECTTS
T ss_pred EEEE--ECC---EEEEEEEEEEEcCCC
Confidence 4322 233 23455566776 355
No 80
>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}
Probab=98.07 E-value=3.1e-05 Score=63.99 Aligned_cols=97 Identities=13% Similarity=0.079 Sum_probs=69.2
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCC-CCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCE
Q 024630 143 KTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPG-ASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNV 221 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPg-g~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDv 221 (265)
.+++.+..++|++|+++||++++.++|++| +++..|. ..++.|+++|.+.|...+... ..+++. .+.+.||-
T Consensus 19 ~~~~~~~l~~f~~a~~~gD~~aL~~LlA~D--vv~~~P~~~~~~~G~~av~~~~~~~~~~~---~~f~~~--~~~~~g~~ 91 (148)
T 3f8x_A 19 NAAVQSGLQEWHRIIAEADWERLPDLLAED--VVFSNPSTFDPYHGKGPLMVILPAVFSVL---ENFQYA--RHFSSKSG 91 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTCGGGSGGGEEEE--EEEECSSCSSCEESHHHHHHHHHHHHHHC---EEEEEE--EEEECSSE
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHhCCC--EEEECCCCCCCcCCHHHHHHHHHHHHhhC---CCEEEE--EEEEeCCe
Confidence 367788999999999999999999999997 6767674 457899999999999988753 244444 34667777
Q ss_pred EEEEEEEEEecCCcceeeEEEEEEEEEe-CC
Q 024630 222 GYVTCIEFVRTKGTSWGGQFVTNVFEKL-DG 251 (265)
Q Consensus 222 A~Vt~~e~v~~~G~~~g~~raTnVfrR~-dG 251 (265)
+++..... .+| ..+....+++-. ||
T Consensus 92 ~~l~f~~~--~~g---~~v~Gvdvl~~d~dG 117 (148)
T 3f8x_A 92 YVLEFNAN--MGD---ELLTGVDLIEFNDAG 117 (148)
T ss_dssp EEEEEEEE--ETT---EEEEEEEEEEECTTS
T ss_pred EEEEEEEE--ECC---EEEEEEEEEEECCCC
Confidence 74443322 223 234555566664 55
No 81
>3lyg_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE GOL; 1.61A {Colwellia psychrerythraea}
Probab=98.07 E-value=4.4e-05 Score=61.39 Aligned_cols=98 Identities=11% Similarity=0.053 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecC-CCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEEEE
Q 024630 146 VLAANARFYDSFKNGDLATMQGLWARGDNVCCVHP-GASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVGYV 224 (265)
Q Consensus 146 I~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhP-gg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA~V 224 (265)
+....++..+|+.+||+|.|.+.|++| .+++-| .+.++.|++++++.+..+.+..+ --++++.+++..+|+..+.
T Consensus 4 ~~~iVqrlW~al~AgD~D~l~adyaeD--aV~i~P~sa~vl~GR~~~r~a~~~L~~~lP--~g~~It~lR~i~ggn~VVS 79 (120)
T 3lyg_A 4 LANIVQRGWEALGAGDFDTLVTDYVEK--MIFIMPGQADVLKGRQAFRSALDNLGEILP--PGFEITGLRQLEGENEIVS 79 (120)
T ss_dssp HHHHHHHHHHHHHHTCHHHHGGGEEEE--EEEECSSTTCEEESHHHHHHHHTTHHHHSC--TTCEEEEEEEEECSSEEEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHhcccC--eEEEccCccceeecHHHHHHHHHHHHhhCC--CCceeeeEEEecCCCEEEE
Confidence 345778889999999999999999997 666667 46789999999999888877654 3457777788888887655
Q ss_pred EEEEEEecCCcceeeEEEEEEEEEeCC
Q 024630 225 TCIEFVRTKGTSWGGQFVTNVFEKLDG 251 (265)
Q Consensus 225 t~~e~v~~~G~~~g~~raTnVfrR~dG 251 (265)
...+-. ++ .+..++...|.-++|
T Consensus 80 eve~~~--~~--~~~~~~~~lf~f~~g 102 (120)
T 3lyg_A 80 IVEWKS--DK--MIASQLSVLFKFEGD 102 (120)
T ss_dssp EEEEEE--TT--EEEEEEEEEEEEETT
T ss_pred EEEEcC--CC--eeeEEEEEEEEEECC
Confidence 433221 12 234566666666665
No 82
>2gbw_B Biphenyl 2,3-dioxygenase beta subunit; rieske oxygenase, oxidoreductase, non heme iron; 1.70A {Sphingobium yanoikuyae} PDB: 2gbx_B* 2ckf_B
Probab=98.04 E-value=0.00024 Score=59.37 Aligned_cols=118 Identities=9% Similarity=-0.035 Sum_probs=78.6
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHH-hhhcCCCceEEecCCCCC------------------ccCHHHHHHHHHHHHhc-
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQ-GLWARGDNVCCVHPGASG------------------ISGYDPVMESWEVVWMN- 201 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~-alwAdDd~V~~vhPgg~~------------------l~Gr~aI~aswe~vfa~- 201 (265)
.+.+|.+...++..++.++|.+.+. ++|++|. .+..|.... ..|++.+.+..+.+...
T Consensus 12 ~~~~I~~~l~rya~~lD~~d~d~w~~~lfteD~--~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~rv~~l~~~~ 89 (174)
T 2gbw_B 12 VHYDIEAHYRAEVRMFQTGQYREWLQGMVAEDI--HYWMPIYEQRLTRDRRPDPTPDDAAIYNDDFGELKQRVERLYSGQ 89 (174)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHTEEEEE--EEEEECCCCCCTTCCCCCCCTTSCEEEEECHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHHHhccccHHHHHHhhccCCE--EEEeeccccccccccccCCCcccceeEcCCHHHHHHHHHHHhcCC
Confidence 4678999999999999999999999 9999984 332232111 24666766655543321
Q ss_pred ----cC-cceEEEEEeEEEEE-eCCEEEEEEEEEEe---cCCcc-eeeEEEEEEEEEeCCeEEEEEEeeC
Q 024630 202 ----YE-FPLAIELKNVRVHV-RGNVGYVTCIEFVR---TKGTS-WGGQFVTNVFEKLDGQWFICIHHAS 261 (265)
Q Consensus 202 ----~~-~pl~iel~dv~V~v-~GDvA~Vt~~e~v~---~~G~~-~g~~raTnVfrR~dG~WrIVhhHaS 261 (265)
.+ .....-+.++.|.. .||.|.+.+...+. .++.. ....++...|+|.+|+|||......
T Consensus 90 ~~~~~p~~rt~H~isN~~i~~~~~~~a~v~s~~~~~~~~~~~~~~~~~G~y~D~l~r~~~~wri~~R~v~ 159 (174)
T 2gbw_B 90 VWMEDPPSKIRYFVSNVEAFEAGNGELDVLSNILVYRNRRQTEVTVHTLGREDKLRRDGNGFKVFRRKLI 159 (174)
T ss_dssp CGGGSSCCEEEEEEEEEEEEEEETTEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred ccccCCCCceEEEecCEEEEEcCCCEEEEEEEEEEEEEcCCCceEEEEEEEEEEEEEcCCEEEEEEEEEE
Confidence 12 12345567778765 68888887554443 23321 2225788899999999999987654
No 83
>1e52_A Excinuclease ABC subunit; DNA excision repair, UVRB, DNA repair, UVRC binding domain; NMR {Escherichia coli} SCOP: a.2.9.1 PDB: 1qoj_A
Probab=98.02 E-value=1.9e-06 Score=62.47 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=34.2
Q ss_pred cccccccHHHHHHHHHHHHhccCHHHHHhhhchhhcccc
Q 024630 102 GESIMLDEEILKRELQIAIEEEDYVQAAKLRDSLKMLDE 140 (265)
Q Consensus 102 ~~~~~~~~~~l~~~L~~ai~~Edye~AA~~RD~i~~l~~ 140 (265)
.......+++|+++|++|.++++||+||++||+|+.|+.
T Consensus 19 ~~~~~~~i~~Le~~M~~AA~~leFE~AA~lRD~I~~L~~ 57 (63)
T 1e52_A 19 PKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRE 57 (63)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTTCHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 344556789999999999999999999999999999874
No 84
>1idp_A Scytalone dehydratase; lyase, melanine biosynthesis; 1.45A {Magnaporthe grisea} SCOP: d.17.4.1 PDB: 2std_A* 1std_A* 3std_A* 6std_A* 4std_A* 5std_A* 7std_A*
Probab=97.89 E-value=3.3e-05 Score=65.83 Aligned_cols=116 Identities=10% Similarity=0.045 Sum_probs=73.8
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecC--CCC--CccCHHHHHHHHHH--HHhccCcceEEEEEeEEE
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHP--GAS--GISGYDPVMESWEV--VWMNYEFPLAIELKNVRV 215 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhP--gg~--~l~Gr~aI~aswe~--vfa~~~~pl~iel~dv~V 215 (265)
...+|.++..+|.+|+.++|.+.|.+++++| ++.-.+ ++. ...+++++.+.|.. .+.+.....+..+....+
T Consensus 15 d~~~I~~l~~rY~Ra~DtkDwd~lr~~fapd--~~~Dy~~~~~~~~~~~~~d~~v~~~~~~~~Lg~~~~~tqH~~~~~~i 92 (172)
T 1idp_A 15 DYLGLMTCVYEWADSYDSKDWDRLRKVIAPT--LRIDYRSFLDKLWEAMPAEEFVGMVSSKQVLGDPTLRTQHFIGGTRW 92 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHTTEEEE--EEEECHHHHSCEEEEEEHHHHHHHHHSTTTTCCTTEEECCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhhcCCHHHHHHHhCCC--EEEEcccccCcccccCCHHHHHHHHhhhhhcCCCCcceEEccCCeEE
Confidence 3568899999999999999999999999987 333232 122 34578888887774 333322223355666677
Q ss_pred EEeCCEEEEEEEEEEe------cCCc-c-e-----eeEEEEEEEEEeCCeEEEEEEee
Q 024630 216 HVRGNVGYVTCIEFVR------TKGT-S-W-----GGQFVTNVFEKLDGQWFICIHHA 260 (265)
Q Consensus 216 ~v~GDvA~Vt~~e~v~------~~G~-~-~-----g~~raTnVfrR~dG~WrIVhhHa 260 (265)
.+.+|.++.. ...+. .++. . . +...++.-|+|+||+|||.+...
T Consensus 93 e~~~dt~a~g-~~~~~~~~~~y~d~~~~~~~~~ghg~G~Y~~~Y~r~dG~WkIa~~~~ 149 (172)
T 1idp_A 93 EKVSEDEVIG-YHQLRVPHQRYKDTTMKEVTMKGHAHSANLHWYKKIDGVWKFAGLKP 149 (172)
T ss_dssp EEEETTEEEE-EEEEEEEEEEESSTTCCCEEEEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred EEecCCeEEE-EEEEEEcccccccccccceeecccccccceEEEEEECCEEEEEEEEE
Confidence 7555544332 22121 1211 1 1 12357788999999999998654
No 85
>3eby_A Beta subunit of A putative aromatic-ring-hydroxyl dioxygenase; YP_001165631.1; 1.75A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.4
Probab=97.85 E-value=0.00015 Score=60.10 Aligned_cols=120 Identities=10% Similarity=-0.009 Sum_probs=79.8
Q ss_pred cchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecC-----CCCC-----ccCHHHHHHHHHHHHhcc--C-cceE
Q 024630 141 DSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHP-----GASG-----ISGYDPVMESWEVVWMNY--E-FPLA 207 (265)
Q Consensus 141 Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhP-----gg~~-----l~Gr~aI~aswe~vfa~~--~-~pl~ 207 (265)
+.+.+|.+...++..++.++|.+++.++|++|... -+.+ .|.. ..|++.+++....+.... + ....
T Consensus 11 ~~~~~I~~ll~rya~~lD~~d~d~w~~lft~D~~y-~~p~~~~~~~~~~~~~~~~~~~~~l~~rv~~l~~~~~~p~~rt~ 89 (163)
T 3eby_A 11 VAQSAIDDFNAAYGLCLDDDRLEQWPTLFVDDCLY-QVIARENVDNGLPAAVMYCDSKGMLADRVVALRKANVFPEHFNR 89 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCGGGTGGGEEEEEEE-EEEEGGGGGSSSCCEEEEESSHHHHHHHHHHHHHTC----CEEE
T ss_pred HHHHHHHHHHHHHHHHhccccHHHHHHhhcCCEEE-EeeccccCCCCCCcEEEEcCCHHHHHHHHHHhhccCCCCCccee
Confidence 34678999999999999999999999999998432 2221 1111 147777776665544211 1 1234
Q ss_pred EEEEeEEE-EEeCCEEEEEEEEEEe-c--CCcce--eeEEEEEEEEEeCCeEEEEEEeeC
Q 024630 208 IELKNVRV-HVRGNVGYVTCIEFVR-T--KGTSW--GGQFVTNVFEKLDGQWFICIHHAS 261 (265)
Q Consensus 208 iel~dv~V-~v~GDvA~Vt~~e~v~-~--~G~~~--g~~raTnVfrR~dG~WrIVhhHaS 261 (265)
.-+.++.| .+.||.|.+.+...+. . +|... ...++...|+|.+|+|||......
T Consensus 90 H~vsn~~i~~~~~d~a~v~s~~~~~~~~~~~~~~~~~~G~y~D~l~r~~~gwri~~R~v~ 149 (163)
T 3eby_A 90 HLIGRAVITGVEGDQVSAEASYVVFQTRNDGETRIYNAGKYVDRFDLSGGTVRLKSRTCI 149 (163)
T ss_dssp EEECCCEEEEEETTEEEEEEEEEEEEECTTCCEEEEEEEEEEEEEECCTTCCEEEEEEEE
T ss_pred EEEcCEEEEecCCCEEEEEEEEEEEEEcCCCccEEEEEEEEEEEEEEECCEEEEEEEEEE
Confidence 44567777 5789998887654443 2 24332 134788999999999999987653
No 86
>3e99_A Benzoate 1,2-dioxygenase beta subunit; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Burkholderia mallei atcc 23344} SCOP: d.17.4.4
Probab=97.56 E-value=0.0033 Score=52.59 Aligned_cols=119 Identities=9% Similarity=-0.105 Sum_probs=75.8
Q ss_pred cchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCC--------C--------ccCHHHHHHHHHHH-----H
Q 024630 141 DSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGAS--------G--------ISGYDPVMESWEVV-----W 199 (265)
Q Consensus 141 Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~--------~--------l~Gr~aI~aswe~v-----f 199 (265)
-...+|.+...++..++..+|.+++.++|++|. .+.-|... + ..++..+...-..+ +
T Consensus 5 ~~~~~i~~~l~~~a~~lD~~~~~~w~~lf~~D~--~Y~~p~~~~~~~~~~d~~~~~~~i~~~~~~~L~~RV~rl~~~~~~ 82 (164)
T 3e99_A 5 IDLADIQAFLYRESRLLDDKAWDAWLDCYRADA--VFWMPSWDDADALVTDPQREISLIYYPNRQGLEDRVFRIKTERSS 82 (164)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEE--EEEEECCCC-----------CEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhccccHHHHHHhcCCCE--EEEEeccccccccccCCCCcceEEEcCCHHHHHHHHHHHhCcccc
Confidence 356789999999999999999999999999984 33334321 1 13455444333222 2
Q ss_pred hccC-cceEEEEEeEEEE-EeCCEEEEEEEEEEe-c--CCcceeeEEEEEEEEEeCCeEEEEEEeeC
Q 024630 200 MNYE-FPLAIELKNVRVH-VRGNVGYVTCIEFVR-T--KGTSWGGQFVTNVFEKLDGQWFICIHHAS 261 (265)
Q Consensus 200 a~~~-~pl~iel~dv~V~-v~GDvA~Vt~~e~v~-~--~G~~~g~~raTnVfrR~dG~WrIVhhHaS 261 (265)
+..+ .....-+.+++|. ..||.+.+.+...+. . ++...-..+.+.+++|.+|+|||......
T Consensus 83 ~~~p~~rtrH~vsnv~v~~~~~~~~~v~s~~~v~~~r~~~~~~~~G~~~d~L~r~~~~wri~~R~v~ 149 (164)
T 3e99_A 83 ATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAIDFSGDAPKIVSKYVV 149 (164)
T ss_dssp CCSSCCEEEEEEEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSSSCEEEEEEEE
T ss_pred ccCCCceEEEEEeCEEEEEeCCCEEEEEEEEEEEEECCCCeEEEEEEEEEEEEEECCEEEEEEEEEE
Confidence 2222 2234556777774 567777776554443 2 23222234788899999999999987654
No 87
>1uli_B Biphenyl dioxygenase small subunit; alpha3 BETA3 hetero hexamer, oxidoreductase; 2.20A {Rhodococcus SP} SCOP: d.17.4.4 PDB: 1ulj_B* 3en1_B* 3eqq_B
Probab=97.55 E-value=0.0031 Score=53.52 Aligned_cols=118 Identities=6% Similarity=-0.102 Sum_probs=75.6
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCC-------------------ccCHHHHHHHHHHHHhc-
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASG-------------------ISGYDPVMESWEVVWMN- 201 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~-------------------l~Gr~aI~aswe~vfa~- 201 (265)
.+.+|.+...++..++..+|.+.+.++|++|. .+..|.... ..+++.+.+....+...
T Consensus 22 ~~~eI~~~l~r~A~lLD~~d~d~w~~lfteD~--~y~~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Rv~rl~~~~ 99 (187)
T 1uli_B 22 LQHEIEQFYYWEAKLLNDRRFQEWFDLLAEDI--HYFMPIRTTRIMRETAQEYSGAREYAHFDDNAQMMRGRLRKITSDV 99 (187)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHTEEEEE--EEEEECBCCCCGGGGGGSBCCTTSCEEEEECHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHHHhcCcCHHHHHHHcccCE--EEEeeccccccccccccccCCccceeeecCCHHHHHHHHHHHhccc
Confidence 57789999999999999999999999999984 333332211 13555665544443221
Q ss_pred ----cCc-ceEEEEEeEEEEE-e-CCEEEEEEEEEEe---cCCcc-eeeEEEEEEEEEeCC--eEEEEEEeeC
Q 024630 202 ----YEF-PLAIELKNVRVHV-R-GNVGYVTCIEFVR---TKGTS-WGGQFVTNVFEKLDG--QWFICIHHAS 261 (265)
Q Consensus 202 ----~~~-pl~iel~dv~V~v-~-GDvA~Vt~~e~v~---~~G~~-~g~~raTnVfrR~dG--~WrIVhhHaS 261 (265)
.+. ....-+.++.|.. . ||.+.+.....+. .++.. .-......+|+|.+| +|||......
T Consensus 100 ~~a~~p~~rtrH~isNv~V~~~~~~d~a~vrs~~~~~~~r~~~~~~~~~g~r~D~l~r~~~~~gwri~~R~v~ 172 (187)
T 1uli_B 100 SWSENPASRTRHVISNVMIVDGEKPGEYHVSSVFIVYRNRLERQLDIFAGERKDILRRTGSEAGFELAKRTIL 172 (187)
T ss_dssp CGGGSSCCEEEEEEEEEEEEECSSTTEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEECSSTTCEEEEEEEEE
T ss_pred ccccCCCCceEEEecCEEEEEeCCCCEEEEEEEEEEEEEcCCCceEEEEEEEEEEEEECCCccceEEEEEEEE
Confidence 121 2345577888877 3 6788887554443 23321 111223388999999 9999987754
No 88
>3hzp_A NTF2-like protein of unknown function; YP_291699.1, structural genomics, joint center structural genomics, JCSG; HET: MSE 1PE; 1.40A {Prochlorococcus marinus}
Probab=97.50 E-value=0.00086 Score=54.77 Aligned_cols=110 Identities=19% Similarity=0.325 Sum_probs=67.5
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEE---EeE-EEEEe
Q 024630 143 KTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIEL---KNV-RVHVR 218 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel---~dv-~V~v~ 218 (265)
+.+|.++.+.|..+=..++. +..--.+ +..++.|.|.++.- +.+.....++. +.++- ..+ ++.+.
T Consensus 5 ~~~i~~l~~~fa~~~~~~~f--~~~n~hd--DflFIrPsGnpItk-----egd~~m~~Sgd--lv~e~~el~ki~~le~~ 73 (131)
T 3hzp_A 5 KEEILSILEAFASTERMGSF--FLDNATA--DFLFIRPSGNPLDA-----KGFENMWSSGD--LVLESAEITKVHKFELL 73 (131)
T ss_dssp HHHHHHHHHHHSSTTTTTTH--HHHHBCT--TCCEECTTSCEECH-----HHHHHHHTSSS--EEEEEEEEEEEEEEEES
T ss_pred HHHHHHHHHHhhCHhhhhhh--hhccCCc--ceEEEcCCCCccch-----hhhHHhhcCCC--EEEEeecccceeeEEEc
Confidence 56777777777433222222 2222223 47778899887542 34445555543 44443 222 44456
Q ss_pred CC-EEEEEEE--EEEecCCcc-eeeEEEEEEEEEeCCeEEEEEEeeCCC
Q 024630 219 GN-VGYVTCI--EFVRTKGTS-WGGQFVTNVFEKLDGQWFICIHHASPV 263 (265)
Q Consensus 219 GD-vA~Vt~~--e~v~~~G~~-~g~~raTnVfrR~dG~WrIVhhHaSp~ 263 (265)
+| .|+++.. +.....|.+ ....++|.||.|.||+|++.--|-|..
T Consensus 74 ~dt~A~v~~t~~~kfsYkG~pned~~~YtrVwKK~d~~WKi~w~qrs~g 122 (131)
T 3hzp_A 74 GSNAAICVFTLGSKFTYKGTQNDDLPTVTSIFKKIDEKWKVAWMQRSSG 122 (131)
T ss_dssp SSSEEEEEEEEEEEEEETTEEEEEBCEEEEEEEEETTEEEEEEEEECCS
T ss_pred CCceEEEEEEecceEEEcCccCCcceeeehhhhhcCCcEEEEEEEecCC
Confidence 66 4877643 334457876 446799999999999999999998854
No 89
>1wql_B Ethylbenzene dioxygenase small subunit; biphenyl dioxygenase, cumene dioxygenase; 2.20A {Pseudomonas fluorescens} SCOP: d.17.4.4
Probab=97.44 E-value=0.0061 Score=51.62 Aligned_cols=118 Identities=8% Similarity=-0.050 Sum_probs=75.4
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCC-----C------CCc-------cCHHHHHHHHHHHHh---
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPG-----A------SGI-------SGYDPVMESWEVVWM--- 200 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPg-----g------~~l-------~Gr~aI~aswe~vfa--- 200 (265)
.+.+|.+...++..++..+|.+.+.++|++|.... +.+. + .+. .+++.++.....+..
T Consensus 21 ~~~eI~~~l~r~A~lLD~~d~~~w~~lfteD~~y~-~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~Rv~rl~~~~~ 99 (186)
T 1wql_B 21 LQNAVEQFYYREAQLLDYQNYEAWLALLTQDIQYW-MPIRTTHTSRNKAMEYVPPGGNAHFDETYESMRARIRARVSGLN 99 (186)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHTTBCTTCCEE-EECBCCCCGGGGGGSBCCTTSCEEEEECHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHcCcCHHHHHHHhhCCEEEE-eeccccccccccccccCCccceEEEeCCHHHHHHHHHHHhcCcc
Confidence 57789999999999999999999999999996543 3221 1 011 344555443333221
Q ss_pred --ccCc-ceEEEEEeEEEEEe--CCEEEEEEEEEEe---cCCcc-ee-eEEEEEEEEEeCC--eEEEEEEeeC
Q 024630 201 --NYEF-PLAIELKNVRVHVR--GNVGYVTCIEFVR---TKGTS-WG-GQFVTNVFEKLDG--QWFICIHHAS 261 (265)
Q Consensus 201 --~~~~-pl~iel~dv~V~v~--GDvA~Vt~~e~v~---~~G~~-~g-~~raTnVfrR~dG--~WrIVhhHaS 261 (265)
..+. ....-+.++.|... ||.+.+.....+. .++.. .- ..+. .+|+|.+| +|||......
T Consensus 100 ~a~~p~~rtrH~isNv~v~~~~~~d~~~v~s~~~~~~~r~~~~~~~~~g~r~-D~l~r~~~~~~wri~~R~v~ 171 (186)
T 1wql_B 100 WTEDPPSRSRHIVSNVIVRETESAGTLEVSSAFLCYRNRLERMTDIYVGERR-DILLRVSDGLGFKIAKRTIL 171 (186)
T ss_dssp GGGSSCCEEEEEEEEEEEEECSSTTEEEEEEEEEEEEEETTTEEEEEEEEEE-EEEEECSSTTSEEEEEEEEE
T ss_pred cccCCCCceEEEecCEEEEEecCCCEEEEEEEEEEEEEcCCCceEEEEEEEE-EEEEECCCccceEEEEEEEE
Confidence 1121 23455778888876 7888887554443 23322 11 1244 88999999 9999987754
No 90
>3jum_A Phenazine biosynthesis protein A/B; chirality, drug design, medicinal CH inhibitor, biosynthetic protein; HET: AOD; 1.45A {Burkholderia SP} PDB: 3b4o_A* 3b4p_A* 3dzl_A* 3ex9_A 3cnm_A* 3jun_A* 3juo_A* 3jup_A* 3juq_A*
Probab=97.41 E-value=0.00097 Score=57.46 Aligned_cols=107 Identities=9% Similarity=-0.013 Sum_probs=70.2
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEE-ecCCC-C-CccCHHHHHHHHHHHHhccCcceEEEEEeEEEE--Ee
Q 024630 144 TSVLAANARFYDSFKNGDLATMQGLWARGDNVCC-VHPGA-S-GISGYDPVMESWEVVWMNYEFPLAIELKNVRVH--VR 218 (265)
Q Consensus 144 ~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~-vhPgg-~-~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~--v~ 218 (265)
....++.++|.+++.+ |++++.+||++|..... ..|.| + ++.|+++|++.|..+++..+ . +++..++++ ..
T Consensus 41 ~~nr~vV~~yl~~~~~-D~~~~~eLfAeDav~e~P~~~~G~P~r~~GReai~~~~~~~~~~~~-d--~~~~~~~v~~taD 116 (185)
T 3jum_A 41 QHNRKIVEQYMHTRGE-ARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFP-D--WVWTDIQIFETQD 116 (185)
T ss_dssp HHHHHHHHHHHHCCGG-GGGGGGGGEEEEEEEEESCCTTSSCEEEESHHHHHHHHHHHHHHST-T--CEEEEEEEECCSS
T ss_pred HHHHHHHHHHHHHhcc-CHHHHHHhCCCCEEEEecCCCCCCCccccCHHHHHHHHHHHHhhCC-C--CeeeEEEEEEecC
Confidence 3566678888888877 99999999999843332 11222 2 37899999999988776433 1 344445554 46
Q ss_pred CCEEEEEEEEEE--ecCCcc--eeeEEEEEEEEEeCCeEE
Q 024630 219 GNVGYVTCIEFV--RTKGTS--WGGQFVTNVFEKLDGQWF 254 (265)
Q Consensus 219 GDvA~Vt~~e~v--~~~G~~--~g~~raTnVfrR~dG~Wr 254 (265)
||++++.+.-.. ...|.+ .-...+-.||+-+||.-.
T Consensus 117 pd~VvvE~~~~Gtv~~TGkp~~~Y~~~yi~V~rVrDGKIv 156 (185)
T 3jum_A 117 PNWFWVECRGEGAIVFPGYPRGQYRNHFLHSFRFENGLIK 156 (185)
T ss_dssp TTEEEEEEEEEEEECCTTSCCEEEEEEEEEEEEEETTEEE
T ss_pred CCEEEEEEEEEEEEcCCCCccceEEEeEEEEEEEECCEEE
Confidence 778888654332 234533 134577778888898533
No 91
>3mg1_A OCP, orange carotenoid protein; carotenoid binding protein, echinone, phycobilisome; HET: ECH; 1.65A {Synechocystis SP} PDB: 3mg2_A* 3mg3_A* 1m98_A*
Probab=97.17 E-value=0.0014 Score=60.58 Aligned_cols=100 Identities=17% Similarity=0.063 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeE--EEE-EeCCEEE
Q 024630 147 LAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNV--RVH-VRGNVGY 223 (265)
Q Consensus 147 ~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv--~V~-v~GDvA~ 223 (265)
.....+|.+++|+||++++.+||++| -+.-+|-+.++.|+++|.++|+.-+.+ +++++..- +.. .+++-+-
T Consensus 195 ~~tVl~Y~e~lNa~Df~a~aaLFA~D--g~LepPf~~PIvGreAI~~y~~~eaq~----~~l~P~~g~~ep~e~g~~qi~ 268 (323)
T 3mg1_A 195 NATVLNYMDNLNANDFDTLIELFTSD--GALQPPFQRPIVGKENVLRFFREECQN----LKLIPERGVTEPAEDGFTQIK 268 (323)
T ss_dssp CHHHHHHHHHHHTTCHHHHHTTEEEE--EEEECTTSCCEESHHHHHHHHHHHCTT----CEEEEEEEEEEECGGGCEEEE
T ss_pred hHHHHHHHHHhcccCHHHHHHHccCC--CeeCCCCCCCccCHHHHHHHHHHHhcc----CEEeeccCccccccCCCceEE
Confidence 45688899999999999999999998 455688889999999999999887653 55655542 111 2233444
Q ss_pred EEEEEEEecCCcceeeEEEEEEEEEe-CCeE
Q 024630 224 VTCIEFVRTKGTSWGGQFVTNVFEKL-DGQW 253 (265)
Q Consensus 224 Vt~~e~v~~~G~~~g~~raTnVfrR~-dG~W 253 (265)
+++.-.....|.. -.+.+..+|+.. +|+=
T Consensus 269 vtGkVqTpwfGv~-v~mnVaW~F~lN~~gkI 298 (323)
T 3mg1_A 269 VTGKVQTPWFGGN-VGMNIAWRFLLNPEGKI 298 (323)
T ss_dssp EEEEEECTTTGGG-CCEEEEEEEEECTTSCE
T ss_pred EEEEEEcccCCcc-ccccceeEEEECCCCcE
Confidence 4443222223322 236777777774 4543
No 92
>3ff0_A Phenazine biosynthesis protein PHZB 2; cystatin-like fold, antibiotic biosynthesis, virulence, STRU genomics; 1.90A {Pseudomonas aeruginosa}
Probab=96.89 E-value=0.0036 Score=52.91 Aligned_cols=102 Identities=19% Similarity=0.173 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhhcCCCceE-EecC-CCC-CccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeC--CE
Q 024630 147 LAANARFYDSFKNGDLATMQGLWARGDNVC-CVHP-GAS-GISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRG--NV 221 (265)
Q Consensus 147 ~aa~~afy~Af~aGDldAL~alwAdDd~V~-~vhP-gg~-~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~G--Dv 221 (265)
.++.++|++. ..+|.+++.+||++|..-- ...| +.+ ++.|++++++.+.......+ .+++.+++++..+ |+
T Consensus 22 r~vV~~~l~~-~~~D~~~~~~LfAeD~v~~~~e~~~G~P~~~~Gre~l~~~~~~~~~~~~---~~~~~~~~i~~t~Dpd~ 97 (163)
T 3ff0_A 22 RETVVKYMNT-KGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFP---DWEWYNIKVFETDDPNH 97 (163)
T ss_dssp HHHHHHHHTC-CGGGGGGGGGGEEEEEEEEESSCSSSSCEEEESHHHHHHHHHHHHHHST---TCEEEEEEEEEBSSTTE
T ss_pred HHHHHHHHHH-hcCCHHHHHHhcCCcccceeeEECCCCCcceecHHHHHHHHHHHHhhCC---CceeeeEEEEEcCCCCE
Confidence 4556666643 4689999999999983200 2223 333 47899999998887665432 2355566666554 47
Q ss_pred EEEEEEEEEe--cCCcce--eeEEEEEEEEEeCCe
Q 024630 222 GYVTCIEFVR--TKGTSW--GGQFVTNVFEKLDGQ 252 (265)
Q Consensus 222 A~Vt~~e~v~--~~G~~~--g~~raTnVfrR~dG~ 252 (265)
.++.+.-... ..|.+- -...+-.||+-+||.
T Consensus 98 vvvE~~~~g~i~~tG~~~~~y~~~yi~v~~vrdGk 132 (163)
T 3ff0_A 98 FWVECDGHGKILFPGYPEGYYENHFLHSFELDDGK 132 (163)
T ss_dssp EEEEEEEEEEECCTTSCCEEEEEEEEEEEEEETTE
T ss_pred EEEEEEEEEEEcCCCcccccEEEeEEEEEEEeCCE
Confidence 7776543332 335331 335677788888985
No 93
>2bmo_B Oxygenase-beta NBDO; nitrobenzene dioxygenase, nitroarene, rieske non-heme dioxygenase, substrate specificity iron- sulfur, metal-binding, NAD; 1.2A {Comamonas SP} SCOP: d.17.4.4 PDB: 2bmq_B 2bmr_B* 1o7n_B 1ndo_B 1o7g_B* 1o7h_B 1o7m_B 1eg9_B 1o7p_B* 1o7w_B 1uuv_B 1uuw_B 2hmj_B 2hmk_B* 2hml_B* 2hmm_B* 2hmn_B* 2hmo_B*
Probab=96.85 E-value=0.03 Score=47.98 Aligned_cols=121 Identities=10% Similarity=0.000 Sum_probs=74.4
Q ss_pred cchhhHHHHHHHHHHHHHcCCHHHHHh-hhcCCCceEEecCCCC------------Cc----cCHHHHHHHHHHHH----
Q 024630 141 DSKTSVLAANARFYDSFKNGDLATMQG-LWARGDNVCCVHPGAS------------GI----SGYDPVMESWEVVW---- 199 (265)
Q Consensus 141 Dsk~aI~aa~~afy~Af~aGDldAL~a-lwAdDd~V~~vhPgg~------------~l----~Gr~aI~aswe~vf---- 199 (265)
+...+|.+...++..++..+|.++..+ +|++|... .+.+... .+ .++..+......+.
T Consensus 29 ~~~~eI~~fl~reA~lLD~~~~d~W~~~lfteD~~y-~~p~~~~~~~~d~~~~~~~~~~~~~d~~~~L~~RV~rl~~~~~ 107 (194)
T 2bmo_B 29 DLQQEVTTLLTREAHLLDIQAYKAWLEHFVAPEIKY-QVISRELRSTSERRYQLNDAVNLYNENYQQLKVRVEHQMDPQN 107 (194)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHTEEEEEEE-EEEEECCCCSSCCCCCSCCEEEEEEECHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHHhcccCHHHHHHhhcCCCEEE-EEecccccccccccccccccceeeeCCHHHHHHHHHHHhcccc
Confidence 346788888889999999999999999 99998433 2322111 01 12334433333221
Q ss_pred -hccC-cceEEEEEeE-EEEEeC--CEEEEEEEEEEe-c--CCc-ceeeEEEEEEEEEeCCe-EEEEEEeeCC
Q 024630 200 -MNYE-FPLAIELKNV-RVHVRG--NVGYVTCIEFVR-T--KGT-SWGGQFVTNVFEKLDGQ-WFICIHHASP 262 (265)
Q Consensus 200 -a~~~-~pl~iel~dv-~V~v~G--DvA~Vt~~e~v~-~--~G~-~~g~~raTnVfrR~dG~-WrIVhhHaSp 262 (265)
+..+ .....-+.++ +|...+ |.+.+.....+. . ++. .....++..+|+|.+|+ |||.......
T Consensus 108 ~a~~p~~rtrH~vsNv~~V~~~~~~d~~~vrs~~~v~~~r~~~~~~~~~G~y~D~l~r~~~g~wri~~R~v~l 180 (194)
T 2bmo_B 108 WANNPKIRFTRFVTNVTAAKDKSAPEILHVRSNLILHRARRENQVDVFYATREDKWKRIEGGGIKLVERFVDY 180 (194)
T ss_dssp GGGSSCCEEEEEEEEEEEEECSSCTTEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEECTTSCEEEEEEEEEC
T ss_pred cccCCCCceEEEecCEEEEEEcCCCCEEEEEEEEEEEEecCCCceEEEEEEEEEEEEECCCCCEEEEEEEEEE
Confidence 1122 2234556778 777766 677776544443 2 222 12234788889999998 9999887543
No 94
>3gzx_B Biphenyl dioxygenase subunit beta; rieskie, non-heme iron, 2Fe-2S, aromatic hydroc catabolism, iron, iron-sulfur, metal-binding, NAD; HET: BNL MES; 1.58A {Comamonas testosteroni} SCOP: d.17.4.4 PDB: 3gzy_B* 2yfi_B 2xr8_B* 2xrx_B* 2xsh_B 2xso_B 2yfj_B* 2yfl_B*
Probab=96.84 E-value=0.053 Score=46.14 Aligned_cols=119 Identities=9% Similarity=-0.128 Sum_probs=76.5
Q ss_pred cchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCC-------------------ccCHHHHHHHHHHHH--
Q 024630 141 DSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASG-------------------ISGYDPVMESWEVVW-- 199 (265)
Q Consensus 141 Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~-------------------l~Gr~aI~aswe~vf-- 199 (265)
+...+|.+...++..++..+|.+...++|++|. .+.-|.... ..++..++..-..+-
T Consensus 20 ~~~~~i~~~l~~~a~llD~~~~~~w~~lft~D~--~Y~~p~~~~~~~~d~~~~~~~~~~~~~~~d~r~~L~~RV~rl~t~ 97 (186)
T 3gzx_B 20 ELQHQVEQFYYREAQLLDHHAFQAWFALLAEDI--HYWMPIRTVRTAREQGLEYVPAGANAHFDDTHATMYGRIRQKTSD 97 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEE--EEEEECBCCCCGGGGGGSBCCTTSCEEEEECHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHhcccCHHHHHHhCCCCE--EEEEecCCCccccccccccCccccceeeeCCHHHHHHHHHHHhcc
Confidence 446778888888889999999999999999984 333332211 125555555444432
Q ss_pred ---hc-cCcceEEEEEeEEEEEe--CCEEEEEEEEEEe-c--CCcc-eeeEEEEEEEEE-eCC-eEEEEEEeeC
Q 024630 200 ---MN-YEFPLAIELKNVRVHVR--GNVGYVTCIEFVR-T--KGTS-WGGQFVTNVFEK-LDG-QWFICIHHAS 261 (265)
Q Consensus 200 ---a~-~~~pl~iel~dv~V~v~--GDvA~Vt~~e~v~-~--~G~~-~g~~raTnVfrR-~dG-~WrIVhhHaS 261 (265)
+. +......-+.+++|... ||.+.|.+...+. . +|.. .-.-+++.+++| .+| +|||......
T Consensus 98 ~~~a~~P~~RtrH~vsNv~v~~~~~~~~~~vrs~~~v~~~r~~~~~~~~~G~y~D~L~r~~~g~~wrI~~R~V~ 171 (186)
T 3gzx_B 98 LNWAEDPPSRTRHLVSNVIVREMDTPGTLEVASAFLLYRSRLERQVDVFAGERRDVLRIADNPLGFQIAKRTII 171 (186)
T ss_dssp CCGGGSSCCEEEEEEEEEEEEECSSTTEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEECSSTTSEEEEEEEEE
T ss_pred cccccCCCceEEEEEcCEEEEEecCCCEEEEEEEEEEEEEcCCCcEEEEEEEEEEEEEEcCCCceEEEEEEEEE
Confidence 11 22223456778888765 6777777555543 2 2332 112478889999 888 9999987653
No 95
>2d7d_A Uvrabc system protein B; helicase, protein-DNA-ADP ternary complex, hydrolase/DNA complex; HET: ADP; 2.10A {Bacillus subtilis} PDB: 2nmv_A* 2fdc_A* 1t5l_A 3uwx_B 1d9z_A* 1d9x_A 2d7d_B* 2nmv_B*
Probab=96.49 E-value=0.00093 Score=66.97 Aligned_cols=39 Identities=28% Similarity=0.313 Sum_probs=29.5
Q ss_pred ccccccHHHHHHHHHHHHhccCHHHHHhhhchhhccccc
Q 024630 103 ESIMLDEEILKRELQIAIEEEDYVQAAKLRDSLKMLDED 141 (265)
Q Consensus 103 ~~~~~~~~~l~~~L~~ai~~Edye~AA~~RD~i~~l~~D 141 (265)
++....+++|+++|++|.+++|||+||++||+|+.|+..
T Consensus 622 ~~~~~~i~~l~~~m~~aa~~~~fe~Aa~~Rd~i~~l~~~ 660 (661)
T 2d7d_A 622 KERQKVVEQMEHEMKEAAKALDFERAAELRDLLLELKAE 660 (661)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhc
Confidence 445556888999999999999999999999999999753
No 96
>3ujm_A Rasputin; NTF2-like fold, RAS signaling, signaling protein; HET: EPE; 2.74A {Drosophila melanogaster}
Probab=96.33 E-value=0.081 Score=41.81 Aligned_cols=106 Identities=8% Similarity=0.065 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCC-EEEEE
Q 024630 147 LAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGN-VGYVT 225 (265)
Q Consensus 147 ~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GD-vA~Vt 225 (265)
.+-.+.||..|.. |.+.|..+|.++ ..+++..+..+.|.++|.+.|...- .....+++..+......+ -.++.
T Consensus 8 ~~Fv~~YY~~ld~-~r~~L~~~Y~~~--s~~~~~~~~~~~G~~~I~~~l~~Lp---f~~~~~~I~t~D~Qp~~~~gili~ 81 (120)
T 3ujm_A 8 REFVRQYYTLLNK-APNHLHRFYNHN--SSYIHGESKLVVGQREIHNRIQQLN---FNDCHAKISQVDAQATLGNGVVVQ 81 (120)
T ss_dssp HHHHHHHHHHHHH-CGGGGGGGEEEE--EEEEETTCCCEESHHHHHHHHHHHC---CCSCEEEEEEEEEEEEGGGEEEEE
T ss_pred HHHHHHHHHHHhc-CHHHHhhheccc--ceEEEcCCcEecCHHHHHHHHHcCC---CcceEEEEecccceEcCCCCEEEE
Confidence 4456778888884 899999999986 5566766788999999999887642 112344555554444433 22222
Q ss_pred EEEEEecCCcceeeEEEEEEEEEeC-CeEEEEEE
Q 024630 226 CIEFVRTKGTSWGGQFVTNVFEKLD-GQWFICIH 258 (265)
Q Consensus 226 ~~e~v~~~G~~~g~~raTnVfrR~d-G~WrIVhh 258 (265)
..-.+..++.+.-...-|-++...+ |+|.|...
T Consensus 82 V~G~l~~~~~~~r~F~QtF~L~p~~~~~y~V~nD 115 (120)
T 3ujm_A 82 VTGELSNDGQPMRRFTQTFVLAAQSPKKYYVHND 115 (120)
T ss_dssp EEEEEESTTCCCEEEEEEEEEEECSTTCEEEEEE
T ss_pred EEEEEEeCCCCCceEEEEEEEEEcCCCCEEEEEE
Confidence 2223444444322334444444454 79999864
No 97
>1c4o_A DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hypertherm protein, replication; HET: DNA BOG; 1.50A {Thermus thermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1d2m_A*
Probab=96.09 E-value=0.00095 Score=66.93 Aligned_cols=41 Identities=32% Similarity=0.414 Sum_probs=0.0
Q ss_pred ccccccccHHHHHHHHHHHHhccCHHHHHhhhchhhccccc
Q 024630 101 SGESIMLDEEILKRELQIAIEEEDYVQAAKLRDSLKMLDED 141 (265)
Q Consensus 101 ~~~~~~~~~~~l~~~L~~ai~~Edye~AA~~RD~i~~l~~D 141 (265)
+.+.+...+++|+++|++|.++++||+||++||+|+.|+..
T Consensus 605 ~~~~~~~~i~~l~~~m~~aa~~l~fe~Aa~lRd~i~~l~~~ 645 (664)
T 1c4o_A 605 SGEDLRERIAELELAMWQAAEALDFERAARLRDEIRALEAR 645 (664)
T ss_dssp -----------------------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 34556678899999999999999999999999999999854
No 98
>3nv0_B NTF2-related export protein; NTF2-like domain, beta sheet heterodimer interface, nucleopo binding pocket, water mediated interface; 1.84A {Caenorhabditis elegans}
Probab=95.69 E-value=0.17 Score=42.01 Aligned_cols=102 Identities=16% Similarity=0.147 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeC-------
Q 024630 147 LAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRG------- 219 (265)
Q Consensus 147 ~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~G------- 219 (265)
.+-.+.||..|.. |.+.|..+|.++ ..+. -.|..+.|.++|.+.|...- ..+.++..+......
T Consensus 38 ~~FV~qYY~~~d~-~R~~L~~fY~d~--S~ls-~~g~~~~G~~~I~~~l~~Lp-----~~~h~I~s~D~qp~~~~~~~q~ 108 (154)
T 3nv0_B 38 KKFMDVYYDVMDR-KREKIGFLYTQV--SNAV-WNGNPINGYDSICEFMKALP-----STQHDIQSLDAQRLPEGVTGDM 108 (154)
T ss_dssp HHHHHHHHHHHHH-CGGGGGGGEEEE--EEEE-ETTEEEESHHHHHHHHHHSC-----CEEEEEEEEEEEECCTTCCGGG
T ss_pred HHHHHHHHHHHhC-CHHHHHHHhcCC--cEEE-ECCeecccHHHHHHHHHhCC-----CeEEEEEEEEEEEcCccccCCC
Confidence 3467789999987 999999999986 3333 34567899999999887541 145555555555443
Q ss_pred --CE-EEEEEEEEEecCCcceeeEEEEEEEEEeCCeEEEEEEe
Q 024630 220 --NV-GYVTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICIHH 259 (265)
Q Consensus 220 --Dv-A~Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVhhH 259 (265)
.+ ..|+|. +..+|.+.-....|-|+...+++|+|+..-
T Consensus 109 ~~~ilI~V~G~--l~~~~~~~r~F~QtFvL~p~~~~y~V~NDi 149 (154)
T 3nv0_B 109 SGGMLLNVAGA--VTVDGDSKRAFTQTLLLGVEDGKYKVKSDR 149 (154)
T ss_dssp TTCEEEEEEEE--EEETTSCCEEEEEEEEEEEETTEEEEEEEE
T ss_pred CCeEEEEEEEE--EEECCCCceeEEEEEEEEEeCCEEEEEeeE
Confidence 22 223343 334454423344444455678999998653
No 99
>1jkg_A P15; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_A
Probab=95.65 E-value=0.17 Score=40.85 Aligned_cols=109 Identities=12% Similarity=0.136 Sum_probs=66.0
Q ss_pred cchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeC-
Q 024630 141 DSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRG- 219 (265)
Q Consensus 141 Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~G- 219 (265)
.......+-.+.||..|.. |.+.|..+|.++. .+.. .|..+.|.++|.+.|... +. -+.++..+......
T Consensus 12 ~a~~v~~~Fv~~YY~~~d~-~r~~L~~~Y~~~S--~ls~-~g~~~~G~~~I~~~l~~L---p~--~~h~i~s~d~q~~~~ 82 (140)
T 1jkg_A 12 QACRAAEEFVNVYYTTMDK-RRRLLSRLYMGTA--TLVW-NGNAVSGQESLSEFFEML---PS--SEFQISVVDCQPVHD 82 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHH-CGGGGGGGEEEEE--EEEE-TTEEEESHHHHHHHHHHS---CC--EEEEEEEEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHhC-CHHHHHHhcCCCc--EEEE-CCeeecCHHHHHHHHHhC---CC--ceeEEEEEEEEEcCC
Confidence 3344555667889999988 8999999999863 3333 356789999999988743 11 23555555555542
Q ss_pred ------CEEEEEEEEEEecCCcceeeEEEEEEEEEeC----CeEEEEEE
Q 024630 220 ------NVGYVTCIEFVRTKGTSWGGQFVTNVFEKLD----GQWFICIH 258 (265)
Q Consensus 220 ------DvA~Vt~~e~v~~~G~~~g~~raTnVfrR~d----G~WrIVhh 258 (265)
+..++...-.+..+|........|-++...+ |+|+|...
T Consensus 83 ~~~~~~~~ilI~V~G~~~~~~~~~r~F~qtF~L~p~~~p~~~~~~I~nD 131 (140)
T 1jkg_A 83 EATPSQTTVLVVICGSVKFEGNKQRDFNQNFILTAQASPSNTVWKIASD 131 (140)
T ss_dssp TTSTTCCEEEEEEEEEEEETTSCCEEEEEEEEEEEECCSSSCEEEEEEE
T ss_pred cccCCCCeEEEEEEEEEEECCCCceeeeEEEEEEecCCCCCCeEEEEee
Confidence 2222222223334454333344444445442 89999875
No 100
>1zo2_A NTF2, nuclear transport factor 2; structural genomics, structural genomics consortium, SGC, transport protein; 1.60A {Cryptosporidium parvum} SCOP: d.17.4.2
Probab=95.25 E-value=0.49 Score=37.72 Aligned_cols=109 Identities=12% Similarity=0.105 Sum_probs=67.8
Q ss_pred cchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEe--
Q 024630 141 DSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVR-- 218 (265)
Q Consensus 141 Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~-- 218 (265)
+.+....+-.+.||..|.. |.+.|..+|.++ .....+ |..+.|.++|.+.|...- ....++++..+.....
T Consensus 10 ~~~~v~~~Fv~~YY~~~d~-~r~~L~~~Y~~~--S~ls~~-g~~~~G~~~I~~~l~~Lp---~~~~~h~i~t~D~qp~~~ 82 (129)
T 1zo2_A 10 QFDQIGKQFVQHYYQTFQT-NRPALGGLYGPQ--SMLTWE-DTQFQGQANIVNKFNSLN---FQRVQFEITRVDCQPSPN 82 (129)
T ss_dssp THHHHHHHHHHHHHHHHHH-CGGGGGGGEEEE--EEEEET-TEEEESHHHHHHHHHHHC---CSCEEEEEEEEEEEECTB
T ss_pred CHHHHHHHHHHHHHHHHhC-CHHHHHHhhCCC--cEEEEC-CceeccHHHHHHHHHhCC---CcceEEEEEEEEEEEeCC
Confidence 3444555667788888888 899999999986 333334 467899999999887741 1124555555554443
Q ss_pred CCEE-EEEEEEEEecCCcceeeEEEEEEEEEeC-CeEEEEEE
Q 024630 219 GNVG-YVTCIEFVRTKGTSWGGQFVTNVFEKLD-GQWFICIH 258 (265)
Q Consensus 219 GDvA-~Vt~~e~v~~~G~~~g~~raTnVfrR~d-G~WrIVhh 258 (265)
|.+. .|+|. +..++.+.-...-|-++...+ |+|.|...
T Consensus 83 ~gilI~V~G~--~~~~~~~~~~F~qtF~L~p~~~~~y~I~nD 122 (129)
T 1zo2_A 83 NGSIVFVTGD--VRIDDGQPLKFSQVFNLMPSGNGGFMIFND 122 (129)
T ss_dssp SSEEEEEEEE--EEETTCCCEEEEEEEEEEECSSSCEEEEEE
T ss_pred CcEEEEEEEE--EEECCCCcceEEEEEEEEEcCCCcEEEEeE
Confidence 3332 23343 333343333445555566666 79998864
No 101
>1gy6_A Nuclear transport factor 2; 1.6A {Rattus norvegicus} SCOP: d.17.4.2 PDB: 1a2k_A 1oun_A 1ar0_A 1u5o_A 1ask_A 1gy5_A 1jb5_A 1jb4_A 1jb2_A 1qma_A
Probab=95.15 E-value=0.3 Score=38.82 Aligned_cols=107 Identities=9% Similarity=0.184 Sum_probs=67.8
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCC--
Q 024630 143 KTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGN-- 220 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GD-- 220 (265)
+....+-.+.||..|.. |.+.|..+|.++ .....+ |..+.|.++|.+.|... +....+.++..+......+
T Consensus 8 ~~v~~~Fv~~YY~~~d~-~r~~L~~~Y~~~--S~ls~~-g~~~~G~~~I~~~l~~L---p~~~~~h~i~t~d~qp~~~~~ 80 (127)
T 1gy6_A 8 EQIGSSFIQHYYQLFDN-DRTQLGAIYIDA--SCLTWE-GQQFQGKAAIVEKLSSL---PFQKIQHSITAQDHQPTPDSC 80 (127)
T ss_dssp HHHHHHHHHHHHHHHHH-HGGGGGGGEEEE--EEEEET-TEEEESHHHHHHHHHHC---SCSCEEEEEEEEEEEECTTSC
T ss_pred HHHHHHHHHHHHHHHhC-CHHHHHHhhCCC--cEEEEC-CccccCHHHHHHHHHhC---CCcceEEEEEEEEEEEeCCCc
Confidence 33445567788888888 899999999986 333334 46789999999988763 1112456666665555433
Q ss_pred E-EEEEEEEEEecCCcceeeEEEEEEEEEeCCeEEEEEE
Q 024630 221 V-GYVTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICIH 258 (265)
Q Consensus 221 v-A~Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVhh 258 (265)
+ ..|+|. +..++.+.-....|-++...+|+|.|...
T Consensus 81 ili~V~G~--~~~~~~~~~~F~qtF~L~p~~~~~~I~nD 117 (127)
T 1gy6_A 81 IISMVVGQ--LKADEDPIMGFHQMFLLKNINDAWVCTND 117 (127)
T ss_dssp EEEEEEEE--EEETTSCCEEEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEEEE--EEECCCCcceEeEEEEEEEeCCEEEEEEE
Confidence 2 223343 33344443445556666667899999865
No 102
>2qiy_A UBP3-associated protein BRE5; deubiquitylation, ubiquitin-specific processing proteases(UB NTF2, protein-protein recognition; 1.69A {Saccharomyces cerevisiae} SCOP: d.17.4.2 PDB: 1zx2_A
Probab=94.44 E-value=0.62 Score=38.11 Aligned_cols=112 Identities=12% Similarity=0.098 Sum_probs=66.0
Q ss_pred cchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCC--------------CCCccCHHHHHHHHHHHHhccCcce
Q 024630 141 DSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPG--------------ASGISGYDPVMESWEVVWMNYEFPL 206 (265)
Q Consensus 141 Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPg--------------g~~l~Gr~aI~aswe~vfa~~~~pl 206 (265)
+.+....+-.+.||..|.. |.+.|..+|.++. .+.+.. +....|.++|.+.|....... ...
T Consensus 10 ~~~~v~~~Fv~~YY~~~d~-~r~~L~~~Y~~~S--~~s~~~~~~~s~~~~~d~~~~~~~~G~~~I~~~l~~L~~pf-~~~ 85 (154)
T 2qiy_A 10 TVQDICFAFLQNYYERMRT-DPSKLAYFYASTA--ELTHTNYQSKSTNEKDDVLPTVKVTGRENINKFFSRNDAKV-RSL 85 (154)
T ss_dssp CHHHHHHHHHHHHHHHHHH-CGGGGGGGEEEEE--EEEEECTTCC----CCSSCCEEEEESHHHHHHHHHHTHHHH-TTE
T ss_pred CHHHHHHHHHHHHHHHHhC-CHHHHHHhhCCCc--EEEEccccccccccccccccceEeeCHHHHHHHHHhccCCC-Cce
Confidence 3455556677888999988 8999999999763 333331 556789999999998752111 124
Q ss_pred EEEEEeEEEEEe----CCE-EEEEEEEEEecCCcceeeEEEEEEEEEeC--CeEEEEEE
Q 024630 207 AIELKNVRVHVR----GNV-GYVTCIEFVRTKGTSWGGQFVTNVFEKLD--GQWFICIH 258 (265)
Q Consensus 207 ~iel~dv~V~v~----GDv-A~Vt~~e~v~~~G~~~g~~raTnVfrR~d--G~WrIVhh 258 (265)
++++..+..... +.+ ..|+|. +..++...-....|-++...+ |+|.|+..
T Consensus 86 ~h~I~s~D~q~~~~~~~~ilI~V~G~--~~~~~~~~r~F~qtFvL~p~~~~~~y~I~ND 142 (154)
T 2qiy_A 86 KLKLDTIDFQYTGHLHKSILIMATGE--MFWTGTPVYKFCQTFILLPSSNGSTFDITND 142 (154)
T ss_dssp EEEEEEEEEEEESGGGCEEEEEEEEE--EEETTCCCEEEEEEEEEEECC---CEEEEEE
T ss_pred EEEEEEEEEEEccCCCCEEEEEEEEE--EEECCCCCceEEEEEEEEEeCCCCcEEEEEE
Confidence 555655555543 222 222343 333343323334444455554 68999865
No 103
>1gy7_A Nuclear transport factor 2; protein transport; 1.6A {Saccharomyces cerevisiae} SCOP: d.17.4.2 PDB: 1gyb_A
Probab=93.97 E-value=0.84 Score=36.07 Aligned_cols=105 Identities=10% Similarity=0.083 Sum_probs=66.9
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEe---CCE
Q 024630 145 SVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVR---GNV 221 (265)
Q Consensus 145 aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~---GDv 221 (265)
...+-.+.||..|.. |.+.|..+|.++ ..+..+ |....|.++|.+.|... +....+.++..+..... |.+
T Consensus 8 v~~~Fv~~YY~~~d~-~r~~L~~~Y~~~--S~~s~~-g~~~~G~~~I~~~l~~L---p~~~~~h~i~t~D~qp~~~~~gi 80 (125)
T 1gy7_A 8 LAQNFTQFYYNQFDT-DRSQLGNLYRNE--SMLTFE-TSQLQGAKDIVEKLVSL---PFQKVQHRITTLDAQPASPYGDV 80 (125)
T ss_dssp HHHHHHHHHHHHHHH-HGGGGGGGEEEE--EEEEET-TEEEESHHHHHHHHHHS---CCSCEEEEEEEEEEEESSTTSCE
T ss_pred HHHHHHHHHHHHHcC-CHHHHHHhhCCC--cEEEEC-CcEecCHHHHHHHHHhC---CCcceEEEEEEEEEEEecCCCeE
Confidence 334567788888888 799999999985 333333 56789999999988653 11135666666666554 333
Q ss_pred -EEEEEEEEEecCCc-ceeeEEEEEEEEEeCCeEEEEEE
Q 024630 222 -GYVTCIEFVRTKGT-SWGGQFVTNVFEKLDGQWFICIH 258 (265)
Q Consensus 222 -A~Vt~~e~v~~~G~-~~g~~raTnVfrR~dG~WrIVhh 258 (265)
..|+|. +..++. +.-....|-++...+++|.|+..
T Consensus 81 li~V~G~--~~~~~~~~~~~F~qtF~L~p~~~~~~I~nD 117 (125)
T 1gy7_A 81 LVMITGD--LLIDEEQNPQRFSQVFHLIPDGNSYYVFND 117 (125)
T ss_dssp EEEEEEE--EEETTCSSCEEEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEEE--EEECCCCCCccEeEEEEEEEeCCEEEEEEE
Confidence 223343 333343 33445566666677889998864
No 104
>2jq5_A SEC-C motif; structural genomics, PSI-2, structure initiative, northeast structural genomics consort NESG; NMR {Rhodopseudomonas palustris}
Probab=93.88 E-value=1.8 Score=34.92 Aligned_cols=97 Identities=19% Similarity=0.231 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEEEE
Q 024630 145 SVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVGYV 224 (265)
Q Consensus 145 aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA~V 224 (265)
...++....|.||..||++-|.+-|.++- .|.. .++.+.+ |.. +..- +.+++.+. ..++.-|+|
T Consensus 27 taE~LMRSRYsAyv~~~~dYL~~T~hP~~-----r~~~----~~~~~~~-~~~---~~~W-~gL~I~~~--~~g~~~g~V 90 (128)
T 2jq5_A 27 SPEALMRSRYAAYALKDFDYIVETTDPER-----RDLF----DHDVNRA-WME---ESDF-LELRVLGS--SEKGSRGTV 90 (128)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHTBCHHH-----HTTC----CHHHHHH-HHH---HEEE-EEEEEEEE--EEETTEEEE
T ss_pred CHHHHHhhhceeeecCCcchhhhhcCccc-----CCcc----chHHHHh-hCc---CCee-eeeEEEEE--ecCCCCEEE
Confidence 34567788999999999999999998762 2221 2234433 322 1111 23333322 234434777
Q ss_pred EEEEEEecCCcceeeEEEEEEEEEeCCeEEEEE
Q 024630 225 TCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICI 257 (265)
Q Consensus 225 t~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVh 257 (265)
.-.-.-..+|.....+...--|+|++|.|..+-
T Consensus 91 eF~A~y~~~g~~~~~~hE~SrF~r~~g~W~YvD 123 (128)
T 2jq5_A 91 EFIARFRRGGGPEQSHHERSQFRKARGRWYFSE 123 (128)
T ss_dssp EEEEEEEESSSCEEEEEEEEEEEEETTEEEEEE
T ss_pred EEEEEEEeCCCceeEEEEeeeEEEECCEEEEeC
Confidence 655444454543255677788999999999864
No 105
>3q90_A RAS GTPase-activating protein-binding protein 1; structural genomics, structural genomics consortium, SGC, NT (A+B proteins); 1.70A {Homo sapiens} SCOP: d.17.4.0
Probab=92.82 E-value=1.3 Score=35.73 Aligned_cols=105 Identities=10% Similarity=0.167 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCC----CC---CccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEe
Q 024630 146 VLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPG----AS---GISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVR 218 (265)
Q Consensus 146 I~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPg----g~---~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~ 218 (265)
-.+-.+.||..|.. |.+.|..+|.++ ..+.+.+ |. .+.|.++|.+.|...-. ....+++..+.....
T Consensus 13 g~~Fv~~YY~~ld~-~r~~L~~~Y~~~--S~l~~~~~~~ng~~~~~~~G~~~I~~~l~~Lp~---~~~~~~I~tvD~Qps 86 (140)
T 3q90_A 13 GREFVRQYYTLLNQ-APDMLHRFYGKN--SSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNF---TNCHTKIRHVDAHAT 86 (140)
T ss_dssp HHHHHHHHHHHHHH-CGGGGGGGEEEE--EEEC----------CCCEEHHHHHHHHHHHTCC---CSCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhc-CHHHHHhhcccC--ceEEEEccCCCCceeecccCHHHHHHHHHhCCC---ccceEEEEeEEEEEe
Confidence 34467778888884 898999999986 4445542 32 57899999998876421 123455554444444
Q ss_pred --CCE-EEEEEEEEEecCCcceeeEEEEEEEEEeC---CeEEEEEE
Q 024630 219 --GNV-GYVTCIEFVRTKGTSWGGQFVTNVFEKLD---GQWFICIH 258 (265)
Q Consensus 219 --GDv-A~Vt~~e~v~~~G~~~g~~raTnVfrR~d---G~WrIVhh 258 (265)
|.+ ..|+|. +..++.+.-....|-++...+ ++|.|...
T Consensus 87 ~~~gilI~V~G~--l~~~~~~~~~F~QtF~L~p~~~~~~~y~V~nD 130 (140)
T 3q90_A 87 LNDGVVVQVMGL--LSNNNQALRRFMQTFVLAPEGSVANKFYVHND 130 (140)
T ss_dssp GGGCEEEEEEEE--EECTTCCCEEEEEEEEEEECSSSTTCEEEEEE
T ss_pred CCCCEEEEEEEE--EecCCCCccEEEEEEEEeecCCCCCCEEEEEE
Confidence 333 223343 333443323344444445554 78999865
No 106
>2i9w_A Hypothetical protein; cystatin-like fold, SEC-C motif fold, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.75A {Psychrobacter arcticus} SCOP: d.17.4.30 g.74.1.1 g.74.1.1
Probab=88.88 E-value=1.8 Score=37.11 Aligned_cols=97 Identities=9% Similarity=0.134 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEEEE
Q 024630 145 SVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVGYV 224 (265)
Q Consensus 145 aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA~V 224 (265)
...++....|.||..+|++-|.+-|.++- .|. .-++++. .|..-. .+ +.+++.+...-..++.|+|
T Consensus 52 taE~LMRSRYSAfvl~~~dYL~~T~hP~~-----r~~----~~~~~i~-~~~~~~-~W---lgLeIl~~~~G~~~~~g~V 117 (184)
T 2i9w_A 52 TAEHLMRTRYSAFVLVKPEYIVKTTLPAQ-----QDL----LDIKAIE-NWAKET-DW---AGLEVVAHTPKLSKRHAQV 117 (184)
T ss_dssp SHHHHHHHHHHHHHHTCHHHHHHTBCHHH-----HTT----CCHHHHH-HHHHHS-EE---EEEEEEEEETTSSSSEEEE
T ss_pred CHHHHHHHhHHHHHcccHHHHHHhcCccc-----Ccc----ccHHHHH-hhccCC-ee---eceEEEEeecCCCCCccEE
Confidence 34557778899999999999999998762 222 1234444 343211 11 2333322110023567888
Q ss_pred EEEEEEecCCcceeeEEEEEEEEEeCC------eEEEE
Q 024630 225 TCIEFVRTKGTSWGGQFVTNVFEKLDG------QWFIC 256 (265)
Q Consensus 225 t~~e~v~~~G~~~g~~raTnVfrR~dG------~WrIV 256 (265)
.-.-....+| ....+..+--|+|++| .|..+
T Consensus 118 eF~A~y~~~g-~~~~lhErSrFvr~~G~~~~~~rW~Yv 154 (184)
T 2i9w_A 118 EFKAYFKTPD-GLQAHHELSTFVKIKNKANSDASWYFL 154 (184)
T ss_dssp EEEEEEEETT-EEEEEEEEEEEEEEECSSSSCEEEEEC
T ss_pred EEEEEEecCC-CccceehhccceecCCccccccceeec
Confidence 7555554444 3355677778999999 99876
No 107
>1vqq_A Saupbp2A, penicillin-binding protein MECA, low-affinity; beta-lactam, D- transpeptidase, D-carboxypeptidase, biosynthetic protein; 1.80A {Staphylococcus aureus} SCOP: d.17.4.5 d.175.1.1 e.3.1.1 PDB: 1mwu_A* 1mwr_A 1mws_A* 1mwt_A*
Probab=87.45 E-value=3.3 Score=41.28 Aligned_cols=98 Identities=14% Similarity=0.087 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhcc-CcceEEEEEeEEEEEeCCEEEEEE
Q 024630 148 AANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNY-EFPLAIELKNVRVHVRGNVGYVTC 226 (265)
Q Consensus 148 aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~-~~pl~iel~dv~V~v~GDvA~Vt~ 226 (265)
.+.++|.+||++||.++|.++-+++.. .-...++..+.++.++..- ...+++++..+. ...++.+.+..
T Consensus 6 ~~~~~f~~~~~~~d~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~ 75 (646)
T 1vqq_A 6 KEINNTIDAIEDKNFKQVYKDSSYISK---------SDNGEVEMTERPIKIYNSLGVKDINIQDRKIK-KVSKNKKRVDA 75 (646)
T ss_dssp HHHHHHHHHHHTTCHHHHHHTBCHHHH---------HHHCHHHHHTHHHHHHHHHTCCCEEEEEEEEE-EEETTEEEEEE
T ss_pred HHHHHHHHHHhcCCHHHHHHhhchhhh---------hcCCHHHHHHHHHHHHhhhccCCceEEecccc-ccCCCeEEEEE
Confidence 356789999999999999998544210 0012344445566555421 134667666543 24567777765
Q ss_pred EEEEecCCcceeeEEEEEEEEEeCCeEEEE
Q 024630 227 IEFVRTKGTSWGGQFVTNVFEKLDGQWFIC 256 (265)
Q Consensus 227 ~e~v~~~G~~~g~~raTnVfrR~dG~WrIV 256 (265)
...+....+.+ ....+..++|.++.|++.
T Consensus 76 ~~~~~~~~g~~-~y~~~~~l~~~~~~w~v~ 104 (646)
T 1vqq_A 76 QYKIKTNYGNI-DRNVQFNFVKEDGMWKLD 104 (646)
T ss_dssp EEEEEETTEEE-EEEEEEEEEECSSSEEEC
T ss_pred EEEEEeccceE-EEcceEEEEEcCCeEEEE
Confidence 54444433232 234444466888899864
No 108
>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A
Probab=87.15 E-value=3.9 Score=36.07 Aligned_cols=56 Identities=16% Similarity=0.131 Sum_probs=39.9
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCC-C-----------------------------CCccCHHHHH
Q 024630 143 KTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPG-A-----------------------------SGISGYDPVM 192 (265)
Q Consensus 143 k~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPg-g-----------------------------~~l~Gr~aI~ 192 (265)
+.-+.+-.+.||..|..+|-..|..+|.++.-.+.-.++ + ....|+++|.
T Consensus 15 ~~~~~~Fv~~Yy~~fD~~~R~~L~~lY~~~s~fS~~~~~~~~~~~~~~~~~Y~~~sRNl~~~~~~~~r~~~~~~G~~~I~ 94 (250)
T 1jkg_B 15 KSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIPFIPQNPARSSLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVV 94 (250)
T ss_dssp HHHHHHHHHHHHHHHTSSCGGGGGGTEEEEEEEEEECCCC------CCCHHHHTTBCCTTTCCCHHHHHHHSEESHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCcHHHHHHhhCcCcEEEEEeCCCCCCccccchhhhhhhccchhcccchhhhhhhhccCHHHHH
Confidence 345667788999999999999999999986422222121 1 2468999999
Q ss_pred HHHHHH
Q 024630 193 ESWEVV 198 (265)
Q Consensus 193 aswe~v 198 (265)
+.|...
T Consensus 95 ~~l~~L 100 (250)
T 1jkg_B 95 AFLNEL 100 (250)
T ss_dssp HHHTTS
T ss_pred HHHHhC
Confidence 988653
No 109
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=86.40 E-value=6.7 Score=32.28 Aligned_cols=83 Identities=11% Similarity=0.149 Sum_probs=60.9
Q ss_pred HHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCCEEEEEEEE
Q 024630 149 ANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGNVGYVTCIE 228 (265)
Q Consensus 149 a~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GDvA~Vt~~e 228 (265)
+-.++.+|+-..|...|..+|..|- |..=-..+....|...|.+.++..- .+ -+...+...+.+=.|.+.+.++.-
T Consensus 25 lA~~Yi~AlT~hDy~~L~~Fynrds-Vf~D~ta~~~YtG~r~Ii~Fl~RaH-~g--vLey~fnieHmfnsGsLVVmiGnY 100 (154)
T 3gzb_A 25 LAVKYMDALTEHDYKTLITFYNRDS-IFFDKTANRKYTGGRFIIDFLERAH-QG--VLEYDFNIEHMYNAGSLVVMIGNY 100 (154)
T ss_dssp HHHHHHHHHHTTCHHHHHTTCCTTC-EEEETTTTEEEESHHHHHHHHHHHT-TT--CCCCEEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHHhccCHHHHHHHhCccc-eeeeeccCcceeCcHHHHHHHHHHh-hh--heeeccChhhhccCCcEEEEEcce
Confidence 3456889999999999999999983 4433456677899999998766643 22 244455444667899999988887
Q ss_pred EEecCCc
Q 024630 229 FVRTKGT 235 (265)
Q Consensus 229 ~v~~~G~ 235 (265)
+.++.|+
T Consensus 101 ~~kGPg~ 107 (154)
T 3gzb_A 101 HFKGPGE 107 (154)
T ss_dssp EEEEEEG
T ss_pred eecCchH
Confidence 7776555
No 110
>3k7c_A Putative NTF2-like transpeptidase; structural genomics, JOIN for structural genomics, JCSG, protein structure initiative unknown function; HET: PGE; 2.00A {Campylobacter jejuni}
Probab=86.28 E-value=5 Score=31.79 Aligned_cols=94 Identities=11% Similarity=0.152 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHH-------HHHhccCcce-EEEEEeEEEEEeC
Q 024630 148 AANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWE-------VVWMNYEFPL-AIELKNVRVHVRG 219 (265)
Q Consensus 148 aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe-------~vfa~~~~pl-~iel~dv~V~v~G 219 (265)
.+-.+|++++..||.+...++-.=. +.... ...+.+..-+. .....- +.+ .|+... ..+.+
T Consensus 11 ~~ak~F~~~l~~GD~e~av~~i~~p-------~~~~~-~~~e~~~gki~m~~~~~~~~~ekk-GGi~~I~~~~--~~~d~ 79 (114)
T 3k7c_A 11 DLAKNFTKDLYSGDTKSVMSYIDLS-------EAKSD-EEKTFVSDKITQVVAENAAKAKRM-GGVKDIQIEE--KTINK 79 (114)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTBCCS-------SCCSH-HHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEE--EEECS
T ss_pred HHHHHHHHHHHcCCHHHHHhhccCC-------cccch-hHHHHHHHHHHHHHHHHHHHHHHc-CCcceEEEEE--eeccC
Confidence 3446799999999999999884322 11110 01111221111 111111 222 344432 34689
Q ss_pred CEEEEEEEEEEecCCcceeeEEEEEEEEEeCCeEEEE
Q 024630 220 NVGYVTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFIC 256 (265)
Q Consensus 220 DvA~Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIV 256 (265)
+.|.|...-.- .+|.. ...+.=+.++||.|+|.
T Consensus 80 ~~A~V~v~v~~-knG~t---~~~~i~LiK~dG~WkV~ 112 (114)
T 3k7c_A 80 DSAKIRVLVLF-NNDNN---QSSNVFLAKKDRKWLVL 112 (114)
T ss_dssp SEEEEEEEEEE-TTSCE---EEEEEEEEESSSSEEEC
T ss_pred CEEEEEEEEEE-CCCCc---cccceeeEEeCCeEEEE
Confidence 99999876443 34533 34455578999999985
No 111
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=83.72 E-value=0.28 Score=46.73 Aligned_cols=48 Identities=21% Similarity=0.352 Sum_probs=35.4
Q ss_pred ccccccHHHHHHHHHHHHhccCHHHHHhhhchhhcccccchhhHHHHHHHHH
Q 024630 103 ESIMLDEEILKRELQIAIEEEDYVQAAKLRDSLKMLDEDSKTSVLAANARFY 154 (265)
Q Consensus 103 ~~~~~~~~~l~~~L~~ai~~Edye~AA~~RD~i~~l~~Dsk~aI~aa~~afy 154 (265)
......++.|+.+.+.++..+||++|+.+++++..|+. ++..+.++|.
T Consensus 397 ~~l~~~i~~l~~~~~~~~~~~d~~~~~~l~~~~~~~~~----~~~~~~~~~~ 444 (468)
T 3pxg_A 397 KELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLRE----QVEDTKKSWK 444 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHH----HHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 44455677788888889999999999999999887653 3444444443
No 112
>2fzt_A Hypothetical protein TM0693; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.05A {Thermotoga maritima} SCOP: a.46.3.1 PDB: 2g42_A
Probab=82.17 E-value=2.7 Score=31.18 Aligned_cols=42 Identities=26% Similarity=0.453 Sum_probs=30.6
Q ss_pred ccHHHHHHHHHHHHhccCHHHHHhhhch----hhcccccchhhHHH
Q 024630 107 LDEEILKRELQIAIEEEDYVQAAKLRDS----LKMLDEDSKTSVLA 148 (265)
Q Consensus 107 ~~~~~l~~~L~~ai~~Edye~AA~~RD~----i~~l~~Dsk~aI~a 148 (265)
+++.+++++.+.||++||||.--.|=++ |+.|+.+-...|..
T Consensus 2 ~~I~EIEk~ID~aIE~edyE~L~~LL~kREkLlk~L~~e~l~~i~E 47 (79)
T 2fzt_A 2 MNIDEIERKIDEAIEKEDYETLLSLLNKRKELMEGLPKDKLSEILE 47 (79)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhCcHHHHHHHHH
Confidence 5788999999999999999998887555 34444444334433
No 113
>3ecf_A NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Anabaena variabilis atcc 29413} SCOP: d.17.4.21
Probab=80.81 E-value=20 Score=28.67 Aligned_cols=97 Identities=18% Similarity=0.226 Sum_probs=65.7
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecC-CCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCC
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHP-GASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGN 220 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhP-gg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GD 220 (265)
+.++..++.+++..||..||+..+. ++++ +.++.| .++.+.|.+.|.-....+...- ..+.+. +..+.++
T Consensus 3 ~re~~v~iieqYl~aF~TgdfS~Vq--Fs~~--~~F~sPir~~~l~G~~tV~gFlt~V~trV---a~V~i~--~hiVeyp 73 (130)
T 3ecf_A 3 ATEKYHEILKKYFLSFETGDFSQVQ--FSCN--LEFLSPISGNTLKGTEEVIPFLKGVTTRV---AEVNIM--STTVEYP 73 (130)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCTTSC--EEEE--EEECCTTCSSCEESHHHHHHHHHHHHTTE---EEEEEE--EEEEETT
T ss_pred cHHHHHHHHHHHHHHHhcCCeeecc--cccC--cEEecCccCCCccCchhHHHHHhhhhhhh---heeeee--EEEeccC
Confidence 4567788999999999999976442 5554 888889 7889999999998666665431 234444 4567777
Q ss_pred EEEEEEEEEEe-cCCcceeeEEEEEEEEEeCCe
Q 024630 221 VGYVTCIEFVR-TKGTSWGGQFVTNVFEKLDGQ 252 (265)
Q Consensus 221 vA~Vt~~e~v~-~~G~~~g~~raTnVfrR~dG~ 252 (265)
-|- +++.++ .+|. .....+-||.++.+
T Consensus 74 ~as--~vf~m~TtkG~---~~~~~~~f~~deeg 101 (130)
T 3ecf_A 74 RAS--GVWQMRTTKGT---LYTLHNFFRLDEEG 101 (130)
T ss_dssp EEE--EEEEEEETTSC---EEEEEEEEEEETTE
T ss_pred ccc--eeEEEEeccce---EEEEeehheecccC
Confidence 654 333333 3552 34556678876554
No 114
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=79.13 E-value=1.7 Score=28.39 Aligned_cols=33 Identities=18% Similarity=0.340 Sum_probs=26.9
Q ss_pred cccHHHHHHHHHHHHhccCHHHHHhhhchhhcc
Q 024630 106 MLDEEILKRELQIAIEEEDYVQAAKLRDSLKML 138 (265)
Q Consensus 106 ~~~~~~l~~~L~~ai~~Edye~AA~~RD~i~~l 138 (265)
+..|+.+++++.-|..++|||.+-.|.-+++.|
T Consensus 7 ~d~I~aiEQqiyvA~seGd~etv~~Le~QL~~l 39 (40)
T 1gp8_A 7 AANKDAIRKQMDAAASKGDVETYRKLKAKLKGI 39 (40)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Confidence 457888999999999999999988887666554
No 115
>2cw9_A Translocase of inner mitochondrial membrane; structure genomics, TIM, structural genomics, NPPFSA, riken structural genomics/proteomics initiative; HET: 1PE; 1.90A {Homo sapiens} SCOP: d.17.4.13
Probab=66.46 E-value=57 Score=27.27 Aligned_cols=46 Identities=9% Similarity=0.157 Sum_probs=27.6
Q ss_pred HHHHhhhchhhccccc--chhhHHHHHHH----HHHHHHcCCHHHHHhhhcCC
Q 024630 126 VQAAKLRDSLKMLDED--SKTSVLAANAR----FYDSFKNGDLATMQGLWARG 172 (265)
Q Consensus 126 e~AA~~RD~i~~l~~D--sk~aI~aa~~a----fy~Af~aGDldAL~alwAdD 172 (265)
+.|..| .+|+.++.+ .+.=+..+.+. ..+||.+||++.|..+.+++
T Consensus 37 ~~~~~l-~~i~~~dp~Fd~~~Fl~~ak~~iy~~Iq~A~~~gD~~~Lr~~~t~~ 88 (194)
T 2cw9_A 37 EMSEVL-TEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEA 88 (194)
T ss_dssp HHHHHH-HHHHHHCTTCCHHHHHHHHHHTHHHHHHHHHHHTCHHHHHHHBCHH
T ss_pred HHHHHH-HHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHhcCHH
Confidence 334434 446665543 22223333343 45799999999999997764
No 116
>3qk9_A Mitochondrial import inner membrane translocase S TIM44; mitochondrion, protein transport; 3.10A {Saccharomyces cerevisiae} PDB: 2fxt_A
Probab=66.25 E-value=47 Score=28.84 Aligned_cols=20 Identities=10% Similarity=0.498 Sum_probs=17.3
Q ss_pred HHHHHHcCCHHHHHhhhcCC
Q 024630 153 FYDSFKNGDLATMQGLWARG 172 (265)
Q Consensus 153 fy~Af~aGDldAL~alwAdD 172 (265)
..+||.+||.+.|..+.+++
T Consensus 92 Il~Af~~GD~~~Lk~llse~ 111 (222)
T 3qk9_A 92 ILEAYVKGDVKVLKKWFSEA 111 (222)
T ss_dssp HHHHHHHTCHHHHHHHBCHH
T ss_pred HHHHHHcCCHHHHHhhcCHH
Confidence 45899999999999997764
No 117
>2imj_A Hypothetical protein DUF1348; alpha beta protein, structural genomics, PSI-2, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5} SCOP: d.17.4.23
Probab=65.88 E-value=58 Score=27.18 Aligned_cols=112 Identities=11% Similarity=0.096 Sum_probs=65.6
Q ss_pred cchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeCC
Q 024630 141 DSKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRGN 220 (265)
Q Consensus 141 Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~GD 220 (265)
+.++|+..+..+- +|+|..|++.++-.|+.| ..-- --..-+.|+++|.+....-+.. .+...+.---....|+
T Consensus 15 t~EtA~~KVr~AE-DaWNsrdP~rValAYT~D--s~WR-NR~eF~~GR~eI~~FLtrKW~r---E~dYrLiKELwaf~~n 87 (166)
T 2imj_A 15 TRESAIEKIRLAE-DGWNSRDPERVSLAYTLD--TQWR-NRAEFAHNREEAKAFLTRKWAK---ELDYRLIKELWAFTDN 87 (166)
T ss_dssp CHHHHHHHHHHHH-HHHTTTCHHHHHTTEEEE--EEEE-ETTEEECSHHHHHHHHHHHHHH---SEEEEEEEEEEEEETT
T ss_pred CHHHHHHHHHHHH-hhhcccChHHHhhccCCC--Ccee-ccccccCcHHHHHHHHHHHHHh---hccchhhhhhheecCC
Confidence 4566666665544 899999999999999987 2221 1234678999999988887753 2444443222234455
Q ss_pred -EEEEEEEEEEecCCcceeeEEEEEEEEEeCCeEEEEEEeeC
Q 024630 221 -VGYVTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICIHHAS 261 (265)
Q Consensus 221 -vA~Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVhhHaS 261 (265)
+|+-..+|-....| .+-+..----|+-.+.+ +|...|+|
T Consensus 88 RIAVRFaYEw~D~~g-qWfRsyGnEnWeFd~~G-lM~~R~aS 127 (166)
T 2imj_A 88 RIAVRYAYEWHDDSG-NWFRSYGNENWEFDEQG-LMARRFAC 127 (166)
T ss_dssp EEEEEEEEEEECTTS-CEEEEEEEEEEEECTTS-CEEEEEEE
T ss_pred eEEEEEEeEEecCCC-CEehhcCCccceECCCc-Chhheecc
Confidence 44434555555444 33333333445554222 34455554
No 118
>1of5_A MRNA export factor MEX67; nuclear protein, repeat, leucine- rich repeat, nuclear transport; 2.8A {Saccharomyces cerevisiae} SCOP: d.17.4.2
Probab=56.62 E-value=72 Score=27.65 Aligned_cols=30 Identities=13% Similarity=0.209 Sum_probs=25.2
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCC
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARG 172 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdD 172 (265)
.+.-+.+-.+.||..|.. |-..|+.+|.++
T Consensus 10 ~~~~~~~Fv~~Yy~~fDs-dR~~L~~lY~~~ 39 (221)
T 1of5_A 10 LGQSSTDFATNFLNLWDN-NREQLLNLYSPQ 39 (221)
T ss_dssp TCHHHHHHHHHHHHHHHH-CGGGGGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHcc-CHHHHHHhhCcC
Confidence 455667788899999998 899999999986
No 119
>3kxe_C Antitoxin protein PARD-1; complex, TA system, protein binding; 2.60A {Caulobacter crescentus NA1000}
Probab=55.67 E-value=8.9 Score=28.80 Aligned_cols=49 Identities=16% Similarity=0.337 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHhccCHHHH-HhhhchhhcccccchhhHHHHHHHHHHHHHc
Q 024630 110 EILKRELQIAIEEEDYVQA-AKLRDSLKMLDEDSKTSVLAANARFYDSFKN 159 (265)
Q Consensus 110 ~~l~~~L~~ai~~Edye~A-A~~RD~i~~l~~Dsk~aI~aa~~afy~Af~a 159 (265)
++|.+-++..|+.+.|.-+ -.|||-|+.|.+. ++.+.++.+++.+++..
T Consensus 12 ~~l~~~i~~~V~sG~Y~s~SEviR~~lR~l~~r-e~~l~~Lr~~l~~G~~S 61 (88)
T 3kxe_C 12 DHFQAFIDSQVADGRYGSASEVIRAGLRLLEEN-EAKLAALRAALIEGEES 61 (88)
T ss_dssp HHHHHHHHHHHTTTSCSSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHC
Confidence 4688889999999999765 6789988888754 33444444444444433
No 120
>2vxg_A LD41624, GE-1, CG6181-PA, isoform A; decapping, EDC4, hedls, mRNA decay, P-BODY, gene regulation; 1.9A {Drosophila melanogaster}
Probab=53.27 E-value=8.6 Score=31.26 Aligned_cols=39 Identities=13% Similarity=0.158 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhccCHHHHHhhhchhhcccccchhhHHHHHHHHHHHHHcCCHHHHHhhhcCCC
Q 024630 111 ILKRELQIAIEEEDYVQAAKLRDSLKMLDEDSKTSVLAANARFYDSFKNGDLATMQGLWARGD 173 (265)
Q Consensus 111 ~l~~~L~~ai~~Edye~AA~~RD~i~~l~~Dsk~aI~aa~~afy~Af~aGDldAL~alwAdDd 173 (265)
.+++++.+.+.+++||+| |..|+.++|.+-++-+...-+
T Consensus 2 ~~~~~I~~Ll~~g~~eeA------------------------f~~aL~ssd~~lv~~lc~~~d 40 (139)
T 2vxg_A 2 AMGDSIKQLLMAGQINKA------------------------FHQALLANDLGLVEFTLRHTD 40 (139)
T ss_dssp HHHHHHHHHHHHTCHHHH------------------------HHHHHHTTCHHHHHHHHHHSC
T ss_pred cHHHHHHHHHHCCCHHHH------------------------HHHHHHhCcHHHHHHHHHcCC
Confidence 356778888888888877 566777888876666655543
No 121
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=53.22 E-value=20 Score=29.69 Aligned_cols=60 Identities=12% Similarity=0.090 Sum_probs=42.8
Q ss_pred ccccccHHHHHHHHHHHHhccCHHHHHhhhchhhcccccchhhHHHHHHHHHHHHHcCCHHHHHhh
Q 024630 103 ESIMLDEEILKRELQIAIEEEDYVQAAKLRDSLKMLDEDSKTSVLAANARFYDSFKNGDLATMQGL 168 (265)
Q Consensus 103 ~~~~~~~~~l~~~L~~ai~~Edye~AA~~RD~i~~l~~Dsk~aI~aa~~afy~Af~aGDldAL~al 168 (265)
....++..+++++|+.+-..+|.+.|. ..|...-+..+......+-++|..+|+++....
T Consensus 92 ~~fLme~me~rE~le~~~~~~d~~~~l------~~l~~~~~~~~~~~~~~l~~~~~~~d~~~A~~~ 151 (174)
T 3hho_A 92 PMFLMEQMELREELESVTACADPEAAL------VAFDTKVTAMQRHYLAQLQGQLAQSEWLAAADQ 151 (174)
T ss_dssp HHHHHHHHHHHHHHHHHTSSSSHHHHH------HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccchHHHH------HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 345567778888888887777744433 344555566778888888899999999876544
No 122
>3ub1_A ORF13-like protein; NTF2-like, transport protein; HET: MSE; 1.80A {Clostridium perfringens}
Probab=52.15 E-value=1.3e+02 Score=26.72 Aligned_cols=92 Identities=7% Similarity=0.091 Sum_probs=58.7
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhccCcceEEEEEeEEEEEeC-C
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNYEFPLAIELKNVRVHVRG-N 220 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~~~pl~iel~dv~V~v~G-D 220 (265)
.+.+|....+.|.+++-.+|.+.|+-+..++..+ .|-+ +.. .-.++.++.++..+ .
T Consensus 153 ~~~~i~~FL~tFFk~Y~sa~~~eL~yy~~~~~~l---~gL~-------------------g~~-~f~~l~~~~vy~~~~~ 209 (261)
T 3ub1_A 153 KTKKITDSVSQFFKAYYEQNQTQIDYFLVDGADI---KGAG-------------------QKF-SFNKIDRINIYKLSDK 209 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHHTTBCTTCCC---CCCC-------------------SCC-EEEEEEEEEEEEEETT
T ss_pred HHHHHHHHHHHHHHHhhcCCHHHHHHHhcCCCcc---cCCC-------------------CcE-EEEEeccEEEecCCCc
Confidence 3567888999999999999999999888776431 1111 111 23455666666443 3
Q ss_pred EEEEEEEEEEecCCcceeeEEEEEEEEEeCCeEEEEE
Q 024630 221 VGYVTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICI 257 (265)
Q Consensus 221 vA~Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVh 257 (265)
...+.........|.. ....++..+.+.++.|.|--
T Consensus 210 ~v~a~V~v~~~d~~t~-~~e~y~L~L~k~~~~w~V~~ 245 (261)
T 3ub1_A 210 EFLAIVDLNVDSFGNA-IKQGFNLTVVQEGDKFLVKT 245 (261)
T ss_dssp EEEEEEEEEEEETTEE-EEEEEEEEEEEETTEEEECC
T ss_pred EEEEEEEEEEcCCCce-EEEEEEEEEEECCCeEEEEe
Confidence 3333333333333433 26678888999999999853
No 123
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=49.98 E-value=16 Score=23.70 Aligned_cols=27 Identities=22% Similarity=0.231 Sum_probs=23.1
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhh
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGL 168 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~al 168 (265)
+..-|.+.+++.|-|...||.+....|
T Consensus 6 ~~d~I~aiEQqiyvA~seGd~etv~~L 32 (40)
T 1gp8_A 6 SAANKDAIRKQMDAAASKGDVETYRKL 32 (40)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 345688889999999999999998776
No 124
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=47.52 E-value=29 Score=28.65 Aligned_cols=58 Identities=12% Similarity=0.151 Sum_probs=41.7
Q ss_pred cccccHHHHHHHHHHHHhccCHHHHHhhhchhhcccccchhhHHHHHHHHHHHHHcCCHHHHHhh
Q 024630 104 SIMLDEEILKRELQIAIEEEDYVQAAKLRDSLKMLDEDSKTSVLAANARFYDSFKNGDLATMQGL 168 (265)
Q Consensus 104 ~~~~~~~~l~~~L~~ai~~Edye~AA~~RD~i~~l~~Dsk~aI~aa~~afy~Af~aGDldAL~al 168 (265)
...++..+++++|+.+-..+|-+ .|..|..+.+..+....+.+-.+|..+|+++....
T Consensus 90 ~fLme~me~rE~lee~~~~~d~~-------~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~A~~~ 147 (171)
T 1fpo_A 90 AFLMEQLELREELDEIEQAKDEA-------RLESFIKRVKKMFDTRHQLMVEQLDNETWDAAADT 147 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccCCHH-------HHHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHH
Confidence 44567778888888775555622 24556666677788888888899999998876654
No 125
>4b0z_A RPN12, 26S proteasome regulatory subunit RPN12; protein binding, proteasome ubitquitin; HET: SGM GOL; 1.58A {Schizosaccharomyces pombe}
Probab=45.92 E-value=43 Score=28.69 Aligned_cols=54 Identities=17% Similarity=0.148 Sum_probs=33.5
Q ss_pred HHHHHHhccCHHHHHhhhchhhc-------c-cccchhhHHHHHHH----HHHHHHcCCHHHHHhh
Q 024630 115 ELQIAIEEEDYVQAAKLRDSLKM-------L-DEDSKTSVLAANAR----FYDSFKNGDLATMQGL 168 (265)
Q Consensus 115 ~L~~ai~~Edye~AA~~RD~i~~-------l-~~Dsk~aI~aa~~a----fy~Af~aGDldAL~al 168 (265)
+|..+++..||+++.++-.+|+. + +..++.+..-+..- -.-|+..+|++++..+
T Consensus 13 ~L~~~~~~~d~~~~~~lL~~lk~~L~~~~~~~p~~~~~~~~~ar~vyE~~a~~al~~~D~~~F~~~ 78 (229)
T 4b0z_A 13 HLADLYDRKDWNACKKELLKLKVELAKQNLFVPTSDKEKASFARNVFEYGVLVSIQTCDIESFARY 78 (229)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCSSCCSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 35566778999999999887752 2 22333333222222 2258999999886555
No 126
>1q40_B MEX67, mRNA export factor MEX67; NTF2-fold, nuclear export, translation; 1.95A {Candida albicans} SCOP: d.17.4.2
Probab=37.73 E-value=1e+02 Score=26.59 Aligned_cols=31 Identities=10% Similarity=0.141 Sum_probs=25.4
Q ss_pred chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCC
Q 024630 142 SKTSVLAANARFYDSFKNGDLATMQGLWARGD 173 (265)
Q Consensus 142 sk~aI~aa~~afy~Af~aGDldAL~alwAdDd 173 (265)
.+.-+.+-.+.||..|.. |-..|+.+|.++.
T Consensus 13 ~~~~~~~Fl~~Yy~~fDs-dR~~L~~lY~~~S 43 (219)
T 1q40_B 13 SRNLATNFIANYLKLWDA-NRSELMILYQNES 43 (219)
T ss_dssp CHHHHHHHHHHHHHHHHS-CGGGGGGGCCTTC
T ss_pred HHHHHHHHHHHHHHHHcc-CHHHHHHhhcccc
Confidence 355667788889999987 8999999999874
No 127
>2qgu_A Probable signal peptide protein; NESG, RSR89, Q8XV73, structural genomics, PSI-2, protein STR initiative; HET: MSE PEF; 1.50A {Ralstonia solanacearum}
Probab=37.54 E-value=1e+02 Score=25.98 Aligned_cols=48 Identities=15% Similarity=0.097 Sum_probs=26.0
Q ss_pred eEEEEEeEEEEEeCCEEEEEEEEEEecCCcceeeEEEEEEEEEeCCeEEEEEE
Q 024630 206 LAIELKNVRVHVRGNVGYVTCIEFVRTKGTSWGGQFVTNVFEKLDGQWFICIH 258 (265)
Q Consensus 206 l~iel~dv~V~v~GDvA~Vt~~e~v~~~G~~~g~~raTnVfrR~dG~WrIVhh 258 (265)
-++++...+....++.+.|.. +.+. +| ..+.+..-+++.+|+||+.=.
T Consensus 119 q~i~v~~~~~~~~~~~~~V~t-~i~~-~g---~~i~v~y~l~~~~g~WkvyDv 166 (211)
T 2qgu_A 119 QTVAYKPFRAAADDTDVVVRS-TVNN-NG---EPVALDYRVEKSPNGWKVYDI 166 (211)
T ss_dssp CEEEECCCCSCTTCSEEEEEE-EEEE-TT---EEEEEEEEEEEETTEEEEEEE
T ss_pred CeEEEeccccCCCCCeEEEEE-EEEe-CC---CeEEEEEEEEEcCCceEEEEE
Confidence 355555433222334444432 2333 45 335566667888999999643
No 128
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=36.86 E-value=19 Score=30.84 Aligned_cols=54 Identities=11% Similarity=0.175 Sum_probs=35.9
Q ss_pred ccccHHHHHHHHHHHHhccCHHHHHhhhchhhcccccchhhHHHHHHHHHHHHHcCCHHHHHhh
Q 024630 105 IMLDEEILKRELQIAIEEEDYVQAAKLRDSLKMLDEDSKTSVLAANARFYDSFKNGDLATMQGL 168 (265)
Q Consensus 105 ~~~~~~~l~~~L~~ai~~Edye~AA~~RD~i~~l~~Dsk~aI~aa~~afy~Af~aGDldAL~al 168 (265)
..++..+++++|+.+- +- +.|..+..+-+..+.+..+.+.+||..||++..+..
T Consensus 133 fLme~me~~E~le~~~---~~-------~~l~~l~~~~~~~~~~~~~~l~~~~~~~d~~~A~~~ 186 (207)
T 3bvo_A 133 FLIEIMEINEKLAEAE---SE-------AAMKEIESIVKAKQKEFTDNVSSAFEQDDFEEAKEI 186 (207)
T ss_dssp HHHHHHHHHHHHHHCC---SH-------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcc---CH-------HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 3345566666666432 21 225666666677777888888899999998876654
No 129
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=33.57 E-value=23 Score=29.61 Aligned_cols=55 Identities=20% Similarity=0.337 Sum_probs=37.1
Q ss_pred cccccHHHHHHHHHHHHhccCHHHHHhhhchhhcccccchhhHHHHHHHHHHHHHcCCHHHHHhh
Q 024630 104 SIMLDEEILKRELQIAIEEEDYVQAAKLRDSLKMLDEDSKTSVLAANARFYDSFKNGDLATMQGL 168 (265)
Q Consensus 104 ~~~~~~~~l~~~L~~ai~~Edye~AA~~RD~i~~l~~Dsk~aI~aa~~afy~Af~aGDldAL~al 168 (265)
...++..+++++|+.| ++-+ .|..|..+-+..+.+..+.+-++|..+|+++....
T Consensus 102 ~fLme~me~rE~leea---~~~~-------~l~~l~~~~~~~~~~~~~~l~~~~~~~d~~~A~~~ 156 (181)
T 3uo3_A 102 QLLLKVLDIHDELSQM---DDEA-------GVKLLEKQNKERIQDIEAQLGQCYNDKDYAAAVKL 156 (181)
T ss_dssp HHHHHHHHHHHHHHHC---CSHH-------HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc---cCHH-------HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 3445666667777765 2222 24455556677888888889999999999876654
No 130
>1yzm_A FYVE-finger-containing RAB5 effector protein rabenosyn-5; RAB GTPase, vesicular trafficking, protein transport; 1.50A {Homo sapiens} SCOP: a.2.19.1
Probab=30.73 E-value=28 Score=23.81 Aligned_cols=39 Identities=13% Similarity=0.241 Sum_probs=31.6
Q ss_pred cccccccHHHHHHHHHHHHhccCHHHHHhhhchhhcccc
Q 024630 102 GESIMLDEEILKRELQIAIEEEDYVQAAKLRDSLKMLDE 140 (265)
Q Consensus 102 ~~~~~~~~~~l~~~L~~ai~~Edye~AA~~RD~i~~l~~ 140 (265)
......++.-++..+++|-++..|++.+.|-.-++.|+.
T Consensus 4 ~dPL~EQ~~~I~~~I~qAk~~~r~DEV~~Le~NLrEL~~ 42 (51)
T 1yzm_A 4 GSPLLQQIHNITSFIRQAKAAGRMDEVRTLQENLRQLQD 42 (51)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 344556778899999999999999999999777776653
No 131
>4hyz_A Uncharacterized protein; PF13026 family protein, DUF3887, structural genomics, joint for structural genomics, JCSG; 2.25A {Ruminococcus gnavus}
Probab=28.53 E-value=1.9e+02 Score=21.85 Aligned_cols=57 Identities=12% Similarity=0.108 Sum_probs=40.8
Q ss_pred hccccc-chhhHHHHHHHHHHHHHcCCHHHHHhhhcCCCceEEecCCCCCccCHHHHHHHHHHHHhcc
Q 024630 136 KMLDED-SKTSVLAANARFYDSFKNGDLATMQGLWARGDNVCCVHPGASGISGYDPVMESWEVVWMNY 202 (265)
Q Consensus 136 ~~l~~D-sk~aI~aa~~afy~Af~aGDldAL~alwAdDd~V~~vhPgg~~l~Gr~aI~aswe~vfa~~ 202 (265)
+.|+.. ++.+|...-+.+.+-+++||.+.+.+.++++ + -+. -..+.+. .|..+....
T Consensus 5 ~~l~~~fde~~v~~~A~~~I~~l~~~dy~~i~~~~~~~--l---k~~----Lt~e~l~-~~~~~~~~~ 62 (114)
T 4hyz_A 5 KELPEGFDKETVRKQAMEDIEIAQSKDYESWKSRFTKD--L---QSS----LTEESYD-SYLKILEKQ 62 (114)
T ss_dssp SSCCTTCCHHHHHHHHHHHHHHHHTTCHHHHHTTBCHH--H---HTT----CCHHHHH-HHHHHHHTT
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHhCCHHHHHHHhCHH--H---Hhh----CCHHHHH-HHHHHHHhc
Confidence 445543 3556777888899999999999999998876 2 122 2346777 998877543
No 132
>3v1a_A Computational design, MID1-APO1; helix-turn-helix, metal binding, homodimer, de novo protein, binding protein; 0.98A {Artificial gene} PDB: 3v1b_A* 3v1c_A* 3v1d_A* 3v1f_A* 3v1e_A
Probab=28.18 E-value=33 Score=23.18 Aligned_cols=37 Identities=11% Similarity=0.096 Sum_probs=30.3
Q ss_pred cccccHHHHHHHHHHHHhccCHHHHHhhhchhhcccc
Q 024630 104 SIMLDEEILKRELQIAIEEEDYVQAAKLRDSLKMLDE 140 (265)
Q Consensus 104 ~~~~~~~~l~~~L~~ai~~Edye~AA~~RD~i~~l~~ 140 (265)
.+..++.-++..+++|-+...||+.+.|..-+++|+.
T Consensus 5 PL~EQ~~~I~~~I~qAk~~rRfdEV~~L~~NL~EL~~ 41 (48)
T 3v1a_A 5 PLAQQIKNIHSFIHQAKAAGRMDEVRTLQENLHQLMH 41 (48)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 3445677799999999999999999999877777754
No 133
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=27.88 E-value=40 Score=25.29 Aligned_cols=37 Identities=30% Similarity=0.254 Sum_probs=27.2
Q ss_pred ccccccHHHHHHHHHHHHhccCHHHHHhhhchhhccc
Q 024630 103 ESIMLDEEILKRELQIAIEEEDYVQAAKLRDSLKMLD 139 (265)
Q Consensus 103 ~~~~~~~~~l~~~L~~ai~~Edye~AA~~RD~i~~l~ 139 (265)
+++..=+..|.++|++|+.+.+..+-|.--..+++..
T Consensus 32 ~DKQ~~i~~Lt~eLq~A~~eaNpaeIA~~~~~L~qAr 68 (90)
T 4b6x_A 32 EDKQLMVNNLTDELQDAIDEANPAEIANTSQQLRHAR 68 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHccCHHHHHhHHHHHHHHH
Confidence 3444456779999999999999998887655444443
No 134
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=27.23 E-value=25 Score=23.36 Aligned_cols=13 Identities=38% Similarity=0.713 Sum_probs=9.9
Q ss_pred Hhhhchhhccccc
Q 024630 129 AKLRDSLKMLDED 141 (265)
Q Consensus 129 A~~RD~i~~l~~D 141 (265)
|.+||+|..|+.+
T Consensus 34 anlrdeiarlene 46 (52)
T 3he5_B 34 ANLRDEIARLENE 46 (52)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5789999888643
No 135
>1ews_A RK-1 defensin, alpha-defisin; alpha defensin, triple-stranded beta-sheet, antimicrobial protein; NMR {Oryctolagus cuniculus} SCOP: g.9.1.1
Probab=25.71 E-value=29 Score=21.01 Aligned_cols=21 Identities=43% Similarity=0.872 Sum_probs=14.1
Q ss_pred ccCcccccccceeecCCCCCcceeeeeecC
Q 024630 23 MPSSCINNLRKHCSLSPLNPYQCNVGLVGS 52 (265)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 52 (265)
|||||. |-| .|+...=|+||-
T Consensus 1 mpcsck----kyc-----dpwevidgscgl 21 (32)
T 1ews_A 1 MPCSCK----KYC-----DPWEVIDGSCGL 21 (32)
T ss_dssp CCSEEE----SSC-----CTTEEEEECCSS
T ss_pred CCcccc----ccc-----Chhheecccccc
Confidence 688884 333 577777777773
No 136
>2ra1_A Surface layer protein; triple coiled-coil, S-layer protein, protein binding, sugar protein; 2.41A {Geobacillus stearothermophilus}
Probab=25.42 E-value=1.2e+02 Score=28.93 Aligned_cols=29 Identities=21% Similarity=0.353 Sum_probs=23.7
Q ss_pred ccccccHHHHHHHHHHHHhccCHHHHHhh
Q 024630 103 ESIMLDEEILKRELQIAIEEEDYVQAAKL 131 (265)
Q Consensus 103 ~~~~~~~~~l~~~L~~ai~~Edye~AA~~ 131 (265)
...-..|..++.+|+++|..+|..+|-.+
T Consensus 97 ~~~g~kl~~~~~eL~~ai~~~dl~~a~~~ 125 (412)
T 2ra1_A 97 YNYATKLDKMRQELKAAVDAKDLKKAEEL 125 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHHhhhccHHHHHHH
Confidence 44456889999999999999999877554
No 137
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=24.78 E-value=13 Score=34.47 Aligned_cols=72 Identities=17% Similarity=0.094 Sum_probs=42.9
Q ss_pred cccCCCCCCCcccccccCCcccccccccccccCCCc--cccccccHHHHHHHHHHHHhccCHHHHHhh-----hchhhcc
Q 024630 66 NVNLNCEPLPFGRIFQLSSLRPCQVKQSDDTEGNLS--GESIMLDEEILKRELQIAIEEEDYVQAAKL-----RDSLKML 138 (265)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~L~~ai~~Edye~AA~~-----RD~i~~l 138 (265)
.+.+|++.|- ..+..+++--..+.||.=|.+|++- ..-...++++++++|++++.+..-.+.... +|.|+..
T Consensus 10 ~~~~~~~~~~-~~~~~l~~~qve~~~~~fE~eGYLvlk~vFs~eEv~~l~~el~~~~~d~~~~k~~~~i~~~~s~~lrs~ 88 (344)
T 3nnf_A 10 GVDLGTENLY-FQSNAMNREQVEQLKQEYEEKGYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTN 88 (344)
T ss_dssp ----------------CCSHHHHHHHHHHHHHSEEEETTCSCHHHHHHHHHHHHHHHHHCCCCSHHHHHHTTSCCCCBCS
T ss_pred ccccCcccee-eccCcCCHHHHHHHHhhhccCceEEEcCCCCHHHHHHHHHHHHHHhhchhhhcccceecCCCccchhcc
Confidence 3568888884 4556788888888898889999984 455556889999999999887655555444 4555544
No 138
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=24.47 E-value=51 Score=19.37 Aligned_cols=23 Identities=22% Similarity=0.131 Sum_probs=17.1
Q ss_pred cHHHHHHHHHHHHhccCHHHHHh
Q 024630 108 DEEILKRELQIAIEEEDYVQAAK 130 (265)
Q Consensus 108 ~~~~l~~~L~~ai~~Edye~AA~ 130 (265)
.+++-...|++.|..-+||-||.
T Consensus 4 rlkqknarlkqeiaaleyeiaal 26 (28)
T 3ra3_B 4 RLKQKNARLKQEIAALEYEIAAL 26 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHHHh
Confidence 45556677888888888888874
No 139
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=23.50 E-value=45 Score=27.84 Aligned_cols=27 Identities=22% Similarity=0.290 Sum_probs=20.8
Q ss_pred cccHHHHHHHHHHHHhccCHHHHHhhh
Q 024630 106 MLDEEILKRELQIAIEEEDYVQAAKLR 132 (265)
Q Consensus 106 ~~~~~~l~~~L~~ai~~Edye~AA~~R 132 (265)
...++++.++|++++..+||++|+.+-
T Consensus 131 ~~~~~~~~~~l~~~~~~~d~~~A~~~~ 157 (181)
T 3uo3_A 131 KERIQDIEAQLGQCYNDKDYAAAVKLT 157 (181)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 345566778888899999999998663
No 140
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=20.05 E-value=13 Score=36.57 Aligned_cols=19 Identities=26% Similarity=0.319 Sum_probs=12.5
Q ss_pred ccchhhHHHHHHHHHHHHH
Q 024630 140 EDSKTSVLAANARFYDSFK 158 (265)
Q Consensus 140 ~Dsk~aI~aa~~afy~Af~ 158 (265)
...+.++.++|....+|..
T Consensus 352 ~~~~~~~~~~n~~~~~~~~ 370 (551)
T 2b5u_A 352 NSRKSELDAANKTLADAIA 370 (551)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHhhhhHHHHHHH
Confidence 3446677777777776665
Done!