BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>024631
MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFK
KVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPST
ASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNGK
QGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKR
RYVLSNFTFGTFSHRHTLQIFTENF

High Scoring Gene Products

Symbol, full name Information P value
WRKY17
AT2G24570
protein from Arabidopsis thaliana 2.0e-55
WRKY11
AT4G31550
protein from Arabidopsis thaliana 2.4e-51
WRKY7
AT4G24240
protein from Arabidopsis thaliana 4.5e-13
WRKY15
AT2G23320
protein from Arabidopsis thaliana 1.1e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  024631
        (265 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2046653 - symbol:WRKY17 "WRKY DNA-binding prot...   299  2.0e-55   2
TAIR|locus:2125239 - symbol:WRKY11 "WRKY DNA-binding prot...   533  2.4e-51   1
TAIR|locus:2135967 - symbol:WRKY7 "WRKY DNA-binding prote...   149  4.5e-13   2
TAIR|locus:2058568 - symbol:WRKY15 "WRKY DNA-binding prot...   109  1.1e-06   2


>TAIR|locus:2046653 [details] [associations]
            symbol:WRKY17 "WRKY DNA-binding protein 17" species:3702
            "Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IC] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005516
            "calmodulin binding" evidence=IDA] [GO:0042742 "defense response to
            bacterium" evidence=IEP] [GO:0010200 "response to chitin"
            evidence=IEP] [GO:0006865 "amino acid transport" evidence=RCA]
            InterPro:IPR003657 Pfam:PF03106 PROSITE:PS50811 SMART:SM00774
            GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0042742
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
            GO:GO:0005516 EMBL:AC006954 Gene3D:2.20.25.80 SUPFAM:SSF118290
            eggNOG:NOG325238 HOGENOM:HOG000029200 ProtClustDB:CLSN2688388
            InterPro:IPR018872 Pfam:PF10533 EMBL:AF425836 EMBL:BT006424
            IPI:IPI00537233 PIR:C84638 RefSeq:NP_565574.1 UniGene:At.14192
            ProteinModelPortal:Q9SJA8 SMR:Q9SJA8 IntAct:Q9SJA8
            MINT:MINT-1338950 STRING:Q9SJA8 PaxDb:Q9SJA8 PRIDE:Q9SJA8
            EnsemblPlants:AT2G24570.1 GeneID:816993 KEGG:ath:AT2G24570
            TAIR:At2g24570 InParanoid:Q9SJA8 OMA:QGLKSME PhylomeDB:Q9SJA8
            Genevestigator:Q9SJA8 GermOnline:AT2G24570 Uniprot:Q9SJA8
        Length = 321

 Score = 299 (110.3 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
 Identities = 58/80 (72%), Positives = 69/80 (86%)

Query:     1 MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFK 60
             M V++M  PK  MEDQTAIQEAA+QG+KSMEHLIR++S+     +VDCS++TD TVSKFK
Sbjct:     1 MTVDIMRLPK--MEDQTAIQEAASQGLKSMEHLIRVLSNRPEERNVDCSEITDFTVSKFK 58

Query:    61 KVISLLNRTGHARFRRGPVH 80
             KVISLLNR+GHARFRRGPVH
Sbjct:    59 KVISLLNRSGHARFRRGPVH 78

 Score = 290 (107.1 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
 Identities = 66/124 (53%), Positives = 78/124 (62%)

Query:   122 SYVQSQPHSLTLDFTKPSLFSGNVKSTEL-EXXXXXXXXXXXXXXXXXAITGDGSVSNGK 180
             S+VQ+   S+TLDFT+PS+F    KS+E+ E                 AITGDGSVS G 
Sbjct:   106 SFVQANQQSVTLDFTRPSVFGAKTKSSEVVEFAKESFSVSSNSSFMSSAITGDGSVSKG- 164

Query:   181 QGGSSIFLAPQAPAV---SAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHC 237
                SSIFLAP APAV   S+GKPPL+  PY+KRC +H DHS+  SGK SGS  GN KCHC
Sbjct:   165 ---SSIFLAP-APAVPVTSSGKPPLSGLPYRKRCFEH-DHSEGFSGKISGS--GNGKCHC 217

Query:   238 SKRR 241
              K R
Sbjct:   218 KKSR 221


>TAIR|locus:2125239 [details] [associations]
            symbol:WRKY11 "WRKY DNA-binding protein 11" species:3702
            "Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IC] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005516
            "calmodulin binding" evidence=IDA] [GO:0042742 "defense response to
            bacterium" evidence=IEP] [GO:0010200 "response to chitin"
            evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
            defense response" evidence=RCA] [GO:0035556 "intracellular signal
            transduction" evidence=RCA] InterPro:IPR003657 Pfam:PF03106
            PROSITE:PS50811 SMART:SM00774 GO:GO:0005634 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0042742 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 GO:GO:0010200 GO:GO:0005516 EMBL:AL080283
            EMBL:AL161579 Gene3D:2.20.25.80 SUPFAM:SSF118290 EMBL:AF404856
            EMBL:AY059731 EMBL:AY150394 EMBL:BT001100 EMBL:AY084855
            IPI:IPI00516622 IPI:IPI00531377 PIR:T10685 RefSeq:NP_567878.2
            RefSeq:NP_849559.1 UniGene:At.24683 ProteinModelPortal:Q9SV15
            SMR:Q9SV15 IntAct:Q9SV15 MINT:MINT-1339027 STRING:Q9SV15
            EnsemblPlants:AT4G31550.1 GeneID:829282 KEGG:ath:AT4G31550
            TAIR:At4g31550 eggNOG:NOG325238 HOGENOM:HOG000029200
            InParanoid:Q9SV15 OMA:AMQENIS PhylomeDB:Q9SV15
            ProtClustDB:CLSN2688388 Genevestigator:Q9SV15 InterPro:IPR018872
            Pfam:PF10533 Uniprot:Q9SV15
        Length = 325

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 121/244 (49%), Positives = 141/244 (57%)

Query:     1 MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
             MAV+LM FPK  ++DQTAIQEAA+QG++SMEHLIR++S+     H VDCS++TD TVSKF
Sbjct:     1 MAVDLMRFPK--IDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHNVDCSEITDFTVSKF 58

Query:    60 KKVISLLNRTGHARFRRGPVHXXXXXXXXXXXXXXXXGNSPHXXXXXXXXXXXXXXXXXX 119
             K VISLLNRTGHARFRRGPVH                   P                   
Sbjct:    59 KTVISLLNRTGHARFRRGPVHSTSSAASQKLQSQIVKNTQPEAPIVRTTTNH-------- 110

Query:   120 XXSYVQSQPHSLTLDFTKPSLFSGNVKSTELEXXXXXXXXXXXXXXXXXAITGDGSVSNG 179
                 +   P S+TLDF+KPS+F    KS ELE                 AITGDGSVSNG
Sbjct:   111 --PQIVPPPSSVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSSFMSSAITGDGSVSNG 168

Query:   180 KQGGSSIFLA--PQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHC 237
             K     IFLA  P  P  S+GKPPLA  PY+KRC +H +HS+  SGK SGS  G  KCHC
Sbjct:   169 K-----IFLASAPLQPVNSSGKPPLAGHPYRKRCLEH-EHSESFSGKVSGSAYG--KCHC 220

Query:   238 SKRR 241
              K R
Sbjct:   221 KKSR 224


>TAIR|locus:2135967 [details] [associations]
            symbol:WRKY7 "WRKY DNA-binding protein 7" species:3702
            "Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IC] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005516
            "calmodulin binding" evidence=IDA;IPI] [GO:0006457 "protein
            folding" evidence=RCA] [GO:0006857 "oligopeptide transport"
            evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
            [GO:0009644 "response to high light intensity" evidence=RCA]
            [GO:0034976 "response to endoplasmic reticulum stress"
            evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
            evidence=RCA] InterPro:IPR003657 Pfam:PF03106 PROSITE:PS50811
            SMART:SM00774 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0005516
            EMBL:AL161561 EMBL:AL078637 Gene3D:2.20.25.80 SUPFAM:SSF118290
            HOGENOM:HOG000029200 InterPro:IPR018872 Pfam:PF10533
            eggNOG:NOG321219 EMBL:AF272746 EMBL:AY072151 EMBL:AY096490
            EMBL:AY084583 IPI:IPI00539893 PIR:T09887 RefSeq:NP_194155.1
            UniGene:At.20946 ProteinModelPortal:Q9STX0 SMR:Q9STX0 IntAct:Q9STX0
            MINT:MINT-1338821 STRING:Q9STX0 EnsemblPlants:AT4G24240.1
            GeneID:828525 KEGG:ath:AT4G24240 TAIR:At4g24240 InParanoid:Q9STX0
            OMA:SSRCHCS PhylomeDB:Q9STX0 ProtClustDB:CLSN2685404
            Genevestigator:Q9STX0 GermOnline:AT4G24240 Uniprot:Q9STX0
        Length = 353

 Score = 149 (57.5 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
 Identities = 37/81 (45%), Positives = 51/81 (62%)

Query:     7 GFPK----RMMEDQTAIQEAATQGIKSMEHLIRLMSHHQS---SNHVDCSDLTDLTVSKF 59
             GFP       MED TA++EAA+ GI  +E  ++L+   Q     +  + + +TD+ V+ F
Sbjct:    19 GFPAIAAAAKMED-TALREAASAGIHGVEEFLKLIGQSQQPTEKSQTEITAVTDVAVNSF 77

Query:    60 KKVISLL--NRTGHARFRRGP 78
             KKVISLL  +RTGHARFRR P
Sbjct:    78 KKVISLLGRSRTGHARFRRAP 98

 Score = 67 (28.6 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
 Identities = 18/55 (32%), Positives = 28/55 (50%)

Query:   187 FLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRR 241
             F  P   + S GKPPL++   K+RC                ++S +++CHCSK+R
Sbjct:   221 FTNPSQLSGSRGKPPLSSASLKRRC----------------NSSPSSRCHCSKKR 259


>TAIR|locus:2058568 [details] [associations]
            symbol:WRKY15 "WRKY DNA-binding protein 15" species:3702
            "Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IC;IDA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005516
            "calmodulin binding" evidence=IDA] [GO:0010200 "response to chitin"
            evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
            defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
            process" evidence=RCA] [GO:0035556 "intracellular signal
            transduction" evidence=RCA] InterPro:IPR003657 Pfam:PF03106
            PROSITE:PS50811 SMART:SM00774 GO:GO:0005634 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            GO:GO:0010200 GO:GO:0005516 EMBL:AC002391 Gene3D:2.20.25.80
            SUPFAM:SSF118290 HOGENOM:HOG000029200 InterPro:IPR018872
            Pfam:PF10533 EMBL:AF224704 EMBL:AF370194 EMBL:AY062950
            IPI:IPI00520861 PIR:T00500 RefSeq:NP_179913.1 UniGene:At.24883
            ProteinModelPortal:O22176 SMR:O22176 IntAct:O22176
            MINT:MINT-1338998 STRING:O22176 EnsemblPlants:AT2G23320.1
            GeneID:816864 KEGG:ath:AT2G23320 TAIR:At2g23320 eggNOG:NOG244405
            OMA:GKCASAS PhylomeDB:O22176 ProtClustDB:CLSN2683885
            Genevestigator:O22176 Uniprot:O22176
        Length = 317

 Score = 109 (43.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
 Identities = 23/30 (76%), Positives = 25/30 (83%)

Query:    53 DLTVSKFKKVISLLNRT--GHARFRRGPVH 80
             D  VSKFK+VISLL+RT  GHARFRR PVH
Sbjct:    73 DAAVSKFKRVISLLDRTRTGHARFRRAPVH 102

 Score = 88 (36.0 bits), Expect = 0.00043, Sum P(2) = 0.00043
 Identities = 28/81 (34%), Positives = 40/81 (49%)

Query:     1 MAVELM--GFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSK 58
             MAVELM   +   +  D  A+QEAA  G+KS+E+ I LMS    ++    S     + S 
Sbjct:     1 MAVELMTRNYISGVGADSFAVQEAAASGLKSIENFIGLMSRDSFNSDQPSSSSASASASA 60

Query:    59 FKKVISLLNRTGHA---RFRR 76
                + S  N T  A   +F+R
Sbjct:    61 AADLESARNTTADAAVSKFKR 81

 Score = 61 (26.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
 Identities = 13/30 (43%), Positives = 22/30 (73%)

Query:   215 KDHSDDL-SGKFSGSTSGNNKCHCSKRRYV 243
             K +S++L +GK + S S + +CHCSK+R +
Sbjct:   192 KCNSENLLTGKCA-SASSSGRCHCSKKRKI 220


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.129   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      265       212   0.00083  112 3  11 22  0.38    33
                                                     31  0.49    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  564 (60 KB)
  Total size of DFA:  160 KB (2096 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.28u 0.13s 17.41t   Elapsed:  00:00:01
  Total cpu time:  17.28u 0.13s 17.41t   Elapsed:  00:00:01
  Start:  Fri May 10 16:35:25 2013   End:  Fri May 10 16:35:26 2013

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