BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024631
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SV15|WRK11_ARATH Probable WRKY transcription factor 11 OS=Arabidopsis thaliana
GN=WRKY11 PE=2 SV=2
Length = 325
Score = 250 bits (639), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 140/244 (57%), Positives = 167/244 (68%), Gaps = 23/244 (9%)
Query: 1 MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNH-VDCSDLTDLTVSKF 59
MAV+LM FPK ++DQTAIQEAA+QG++SMEHLIR++S+ H VDCS++TD TVSKF
Sbjct: 1 MAVDLMRFPK--IDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQHNVDCSEITDFTVSKF 58
Query: 60 KKVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPS 119
K VISLLNRTGHARFRRGPVHS+ S++S + P + T P + PS
Sbjct: 59 KTVISLLNRTGHARFRRGPVHSTSSAASQKLQSQIVKNTQPEAPIVRTTTNHPQIVPPPS 118
Query: 120 TASYVQSQPHSLTLDFTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSAITGDGSVSNG 179
S+TLDF+KPS+F KS ELEFSK++F VS NSSFMSSAITGDGSVSNG
Sbjct: 119 ----------SVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSSFMSSAITGDGSVSNG 168
Query: 180 KQGGSSIFL--APQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHC 237
K IFL AP P S+GKPPLA PY+KRC +H +HS+ SGK SGS G KCHC
Sbjct: 169 K-----IFLASAPLQPVNSSGKPPLAGHPYRKRCLEH-EHSESFSGKVSGSAYG--KCHC 220
Query: 238 SKRR 241
K R
Sbjct: 221 KKSR 224
>sp|Q9SJA8|WRK17_ARATH Probable WRKY transcription factor 17 OS=Arabidopsis thaliana
GN=WRKY17 PE=2 SV=2
Length = 321
Score = 228 bits (580), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 143/245 (58%), Positives = 173/245 (70%), Gaps = 28/245 (11%)
Query: 1 MAVELMGFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFK 60
M V++M PK MEDQTAIQEAA+QG+KSMEHLIR++S+ +VDCS++TD TVSKFK
Sbjct: 1 MTVDIMRLPK--MEDQTAIQEAASQGLKSMEHLIRVLSNRPEERNVDCSEITDFTVSKFK 58
Query: 61 KVISLLNRTGHARFRRGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPST 120
KVISLLNR+GHARFRRG + +S + +T PAPT AP+
Sbjct: 59 KVISLLNRSGHARFRRG--------------PVHSPPSSSVPPPVKVTTPAPTQISAPAP 104
Query: 121 ASYVQSQPHSLTLDFTKPSLFSGNVKSTE-LEFSKDSFCVSSNSSFMSSAITGDGSVSNG 179
S+VQ+ S+TLDFT+PS+F KS+E +EF+K+SF VSSNSSFMSSAITGDGSVS
Sbjct: 105 VSFVQANQQSVTLDFTRPSVFGAKTKSSEVVEFAKESFSVSSNSSFMSSAITGDGSVSK- 163
Query: 180 KQGGSSIFLAPQAPAV---SAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCH 236
GSSIFLAP APAV S+GKPPL+ PY+KRC +H DHS+ SGK SG SGN KCH
Sbjct: 164 ---GSSIFLAP-APAVPVTSSGKPPLSGLPYRKRCFEH-DHSEGFSGKISG--SGNGKCH 216
Query: 237 CSKRR 241
C K R
Sbjct: 217 CKKSR 221
>sp|O22176|WRK15_ARATH Probable WRKY transcription factor 15 OS=Arabidopsis thaliana
GN=WRKY15 PE=2 SV=1
Length = 317
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 57/102 (55%), Gaps = 22/102 (21%)
Query: 1 MAVELM--GFPKRMMEDQTAIQEAATQGIKSMEHLIRLMSHH-----------QSSNHVD 47
MAVELM + + D A+QEAA G+KS+E+ I LMS S++
Sbjct: 1 MAVELMTRNYISGVGADSFAVQEAAASGLKSIENFIGLMSRDSFNSDQPSSSSASASASA 60
Query: 48 CSDL-------TDLTVSKFKKVISLLN--RTGHARFRRGPVH 80
+DL D VSKFK+VISLL+ RTGHARFRR PVH
Sbjct: 61 AADLESARNTTADAAVSKFKRVISLLDRTRTGHARFRRAPVH 102
>sp|Q9STX0|WRKY7_ARATH Probable WRKY transcription factor 7 OS=Arabidopsis thaliana
GN=WRKY7 PE=1 SV=1
Length = 353
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 23/85 (27%)
Query: 159 VSSNSSFMSS--AITGDGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKD 216
VS+ +SFMSS T +S+G + F P + S GKPPL++ K+RC
Sbjct: 196 VSATNSFMSSHRCDTDSTHMSSGFE-----FTNPSQLSGSRGKPPLSSASLKRRC----- 245
Query: 217 HSDDLSGKFSGSTSGNNKCHCSKRR 241
++S +++CHCSK+R
Sbjct: 246 -----------NSSPSSRCHCSKKR 259
>sp|Q9SR07|WRK39_ARATH Probable WRKY transcription factor 39 OS=Arabidopsis thaliana
GN=WRKY39 PE=2 SV=1
Length = 330
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 19 IQEAATQGIKSMEHLIRLMSHHQSSNHVDCSDLTDLTVSKFKKVISLLNR-TGHARFRRG 77
++ A I+S ++ L+S ++S+ + T VSKFK+V SLL R GH +FR
Sbjct: 4 VEAANRSAIESCHGVLNLLSQ-RTSDPKSLTVETGEVVSKFKRVASLLTRGLGHGKFRST 62
Query: 78 PVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPSTASYVQSQP 128
S + GN + P P + + P++A Y + +P
Sbjct: 63 NKFRSSFPQHIFLESPICCGNDLSGDYTQVLAPEP-LQMVPASAVYNEMEP 112
>sp|Q02WY3|SEPF_LACLS Cell division protein SepF OS=Lactococcus lactis subsp. cremoris
(strain SK11) GN=sepF PE=3 SV=1
Length = 196
Score = 30.8 bits (68), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 26/138 (18%)
Query: 76 RGPVHSSPSSSSASAPAAAASGNSPHTQTLTLTPPAPTMAVAPSTASYVQSQPHSL-TLD 134
R P S+P + +A +P T + P P V T S QS ++ T+
Sbjct: 55 RRPAQSTPKPQAQTA--------APKRSASTFSKPMPEKIVQQQTVSQAQSLAATVSTIA 106
Query: 135 FTKPSLFSGNVKSTELEFSKDSFCVSSNSSFMSSA--------ITG-----DGSVSNGKQ 181
+P ++ ++S + K+ CV N FM A +TG DG + N
Sbjct: 107 IKEPRAYADIMESARI--VKNGECVLVNFKFMGDAQARRSIDFMTGVVFTLDGDIQNV-- 162
Query: 182 GGSSIFLAPQAPAVSAGK 199
GG + P V A K
Sbjct: 163 GGQIFLMTPANITVDAAK 180
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.124 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,880,699
Number of Sequences: 539616
Number of extensions: 3840659
Number of successful extensions: 17161
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 235
Number of HSP's that attempted gapping in prelim test: 16252
Number of HSP's gapped (non-prelim): 972
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)