Query 024631
Match_columns 265
No_of_seqs 126 out of 154
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 11:40:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024631.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024631hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iot_A Maltose-binding protein 30.8 31 0.0011 31.2 3.2 19 47-65 356-374 (449)
2 2zxe_G FXYD10, phospholemman-l 26.0 17 0.00056 27.5 0.3 13 232-244 40-52 (74)
3 1bah_A Charybdotoxin, chabii; 16.1 57 0.0019 21.3 1.3 11 222-237 25-35 (37)
4 1pvz_A K+ toxin-like peptide; 15.6 46 0.0016 21.0 0.7 11 222-237 20-30 (31)
5 2jp3_A FXYD domain-containing 15.6 22 0.00076 26.3 -0.9 13 232-244 38-50 (67)
6 1r1g_A Neurotoxin BMK37, BMBKT 13.3 34 0.0011 21.5 -0.4 11 222-237 19-29 (31)
7 1cmr_A Charybdotoxin, alpha ch 13.0 60 0.002 20.4 0.7 13 221-238 18-30 (31)
8 1big_A Toxin BMTX1; scorpion, 12.1 58 0.002 21.3 0.4 11 222-237 25-35 (37)
9 1tsk_A TS KAPA; scorpion, toxi 12.0 59 0.002 21.0 0.5 11 222-237 25-35 (35)
10 1jlz_A Tityustoxin alpha-KTX; 12.0 42 0.0014 20.6 -0.3 12 222-238 12-23 (26)
No 1
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=30.78 E-value=31 Score=31.19 Aligned_cols=19 Identities=5% Similarity=0.017 Sum_probs=10.7
Q ss_pred chhhHHHHHHhchhhhhhh
Q 024631 47 DCSDLTDLTVSKFKKVISL 65 (265)
Q Consensus 47 ~~~~~td~AVskFkkViSL 65 (265)
+..+..+++..+.++++.+
T Consensus 356 ~~eeal~~~~~~~~~i~~~ 374 (449)
T 3iot_A 356 TVDAALAAAQTNAAAMATL 374 (449)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhh
Confidence 4455556666666665544
No 2
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=25.96 E-value=17 Score=27.49 Aligned_cols=13 Identities=23% Similarity=0.519 Sum_probs=2.4
Q ss_pred CCccccCcccccc
Q 024631 232 NNKCHCSKRRYVL 244 (265)
Q Consensus 232 sgRCHCSKKRK~R 244 (265)
|+||-|.++.|.|
T Consensus 40 S~kcrCk~~qk~~ 52 (74)
T 2zxe_G 40 AGKCRCKFNQNKR 52 (74)
T ss_dssp TTC----------
T ss_pred cCccccCCCCCCC
Confidence 6899997777766
No 3
>1bah_A Charybdotoxin, chabii; neurotoxin, potassium channel inhibitor; HET: PCA ABA; NMR {Leiurus quinquestriatus} SCOP: g.3.7.2 PDB: 2a9h_E* 2crd_A* 1lir_A*
Probab=16.13 E-value=57 Score=21.32 Aligned_cols=11 Identities=45% Similarity=0.821 Sum_probs=9.0
Q ss_pred CCccccCCCCCCcccc
Q 024631 222 SGKFSGSTSGNNKCHC 237 (265)
Q Consensus 222 sgKC~~~~sssgRCHC 237 (265)
.|||- .|+|||
T Consensus 25 ~gKCm-----NgkC~C 35 (37)
T 1bah_A 25 RGKCM-----NKKXRC 35 (37)
T ss_dssp CCCBC-----SSSBCC
T ss_pred Cccee-----CCCCCc
Confidence 58993 599999
No 4
>1pvz_A K+ toxin-like peptide; alpha/beta scaffold; NMR {Mesobuthus martensii} SCOP: g.3.7.2
Probab=15.63 E-value=46 Score=20.99 Aligned_cols=11 Identities=27% Similarity=0.631 Sum_probs=8.7
Q ss_pred CCccccCCCCCCcccc
Q 024631 222 SGKFSGSTSGNNKCHC 237 (265)
Q Consensus 222 sgKC~~~~sssgRCHC 237 (265)
.|||- .|+|||
T Consensus 20 ~gKC~-----NgkC~C 30 (31)
T 1pvz_A 20 NPPCR-----NGFCAC 30 (31)
T ss_dssp CCCEE-----TTEESC
T ss_pred CCccc-----CCCcee
Confidence 48994 589999
No 5
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=15.55 E-value=22 Score=26.31 Aligned_cols=13 Identities=23% Similarity=0.659 Sum_probs=9.2
Q ss_pred CCccccCcccccc
Q 024631 232 NNKCHCSKRRYVL 244 (265)
Q Consensus 232 sgRCHCSKKRK~R 244 (265)
|+||-|.++.|.|
T Consensus 38 S~kcrCk~~qk~~ 50 (67)
T 2jp3_A 38 SGKCKCRRNHTPS 50 (67)
T ss_dssp TTHHHHHHTCCTT
T ss_pred cCcccccCCCCCC
Confidence 5899996655554
No 6
>1r1g_A Neurotoxin BMK37, BMBKTTX1; siras from S atoms, scorpion toxin, reductive dimethylation; HET: MLY; 1.72A {Synthetic} SCOP: g.3.7.2 PDB: 1q2k_A 3e8y_X
Probab=13.32 E-value=34 Score=21.53 Aligned_cols=11 Identities=45% Similarity=0.960 Sum_probs=8.9
Q ss_pred CCccccCCCCCCcccc
Q 024631 222 SGKFSGSTSGNNKCHC 237 (265)
Q Consensus 222 sgKC~~~~sssgRCHC 237 (265)
.|||. .|+|||
T Consensus 19 ~gKC~-----NgkC~C 29 (31)
T 1r1g_A 19 SGXCI-----NSXCXC 29 (31)
T ss_dssp EEEEE-----TTEEEE
T ss_pred Ccccc-----CCCccc
Confidence 58994 589999
No 7
>1cmr_A Charybdotoxin, alpha chimera; antagonist of nicotinic acetylcholine receptor, curaremimetic protein; NMR {Synthetic} SCOP: g.3.7.2
Probab=12.98 E-value=60 Score=20.43 Aligned_cols=13 Identities=23% Similarity=0.570 Sum_probs=9.8
Q ss_pred CCCccccCCCCCCccccC
Q 024631 221 LSGKFSGSTSGNNKCHCS 238 (265)
Q Consensus 221 ~sgKC~~~~sssgRCHCS 238 (265)
..|||- .|+|||-
T Consensus 18 ~~gKC~-----NgkC~Cy 30 (31)
T 1cmr_A 18 SKGWCD-----HRGCICE 30 (31)
T ss_dssp CCCCEE-----TTEECCC
T ss_pred CCCcee-----CCCceeC
Confidence 358994 5899993
No 8
>1big_A Toxin BMTX1; scorpion, neurotoxin, structure, large conductance potassium channel, voltage gated potassium channel; HET: PCA; NMR {Mesobuthus martensii} SCOP: g.3.7.2 PDB: 2bmt_A*
Probab=12.13 E-value=58 Score=21.29 Aligned_cols=11 Identities=55% Similarity=1.195 Sum_probs=9.0
Q ss_pred CCccccCCCCCCcccc
Q 024631 222 SGKFSGSTSGNNKCHC 237 (265)
Q Consensus 222 sgKC~~~~sssgRCHC 237 (265)
.|||- .|+|||
T Consensus 25 ~gKCm-----NgkC~C 35 (37)
T 1big_A 25 NGKCM-----NGKCRC 35 (37)
T ss_dssp CCEEE-----TTEEEC
T ss_pred CCcee-----CCCccc
Confidence 58994 599999
No 9
>1tsk_A TS KAPA; scorpion, toxin, potassium channel, neurotoxin; NMR {Tityus serrulatus} SCOP: g.3.7.2
Probab=11.97 E-value=59 Score=20.97 Aligned_cols=11 Identities=45% Similarity=1.280 Sum_probs=8.8
Q ss_pred CCccccCCCCCCcccc
Q 024631 222 SGKFSGSTSGNNKCHC 237 (265)
Q Consensus 222 sgKC~~~~sssgRCHC 237 (265)
.|||- .|+|||
T Consensus 25 ~gKCm-----NgkC~C 35 (35)
T 1tsk_A 25 TGKCT-----NGRCDC 35 (35)
T ss_dssp CCEEE-----TTEEEC
T ss_pred CCcee-----CCCccC
Confidence 58994 589998
No 10
>1jlz_A Tityustoxin alpha-KTX; scorpion venom, K+-channel blocker, structure; NMR {Synthetic} SCOP: g.3.7.2
Probab=11.96 E-value=42 Score=20.60 Aligned_cols=12 Identities=50% Similarity=1.054 Sum_probs=9.3
Q ss_pred CCccccCCCCCCccccC
Q 024631 222 SGKFSGSTSGNNKCHCS 238 (265)
Q Consensus 222 sgKC~~~~sssgRCHCS 238 (265)
.|||- .|+|+|-
T Consensus 12 ~gKCm-----NgkC~Cy 23 (26)
T 1jlz_A 12 SGKCI-----NGRCKCY 23 (26)
T ss_dssp SEEEE-----TTEEEEC
T ss_pred CCEEe-----CCCceee
Confidence 47994 5899995
Done!