Query 024636
Match_columns 265
No_of_seqs 207 out of 1044
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 11:46:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024636.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024636hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3q_A Alpha-ketoglutarate-dep 100.0 2.9E-35 1E-39 258.9 15.7 157 86-264 45-202 (211)
2 3s57_A Alpha-ketoglutarate-dep 100.0 3.7E-30 1.3E-34 225.1 12.6 137 95-265 56-203 (204)
3 3tht_A Alkylated DNA repair pr 100.0 8.9E-30 3E-34 238.6 11.4 166 92-264 145-312 (345)
4 2iuw_A Alkylated repair protei 100.0 9.1E-29 3.1E-33 220.8 10.1 137 95-265 83-230 (238)
5 3lfm_A Protein FTO; FAT MASS a 95.7 0.016 5.5E-07 55.6 6.7 76 145-221 188-299 (495)
6 2rg4_A Uncharacterized protein 90.4 0.98 3.4E-05 38.7 8.2 77 144-225 100-193 (216)
7 2rdq_A 1-deoxypentalenic acid 84.4 1.5 5.3E-05 38.1 5.9 26 197-225 210-235 (288)
8 2opw_A Phyhd1 protein; double- 84.4 2.8 9.6E-05 36.5 7.6 26 197-225 227-252 (291)
9 2a1x_A Phytanoyl-COA dioxygena 80.3 4.8 0.00016 35.4 7.6 27 196-225 214-240 (308)
10 2fct_A Syringomycin biosynthes 74.2 9.1 0.00031 33.6 7.6 26 197-225 219-244 (313)
11 2jig_A Prolyl-4 hydroxylase; h 67.2 13 0.00045 31.2 6.8 102 124-227 77-206 (224)
12 3kt7_A PKHD-type hydroxylase T 62.9 17 0.00057 36.3 7.3 77 145-226 123-215 (633)
13 3dkq_A PKHD-type hydroxylase S 57.5 8.3 0.00028 33.7 3.8 73 147-227 99-184 (243)
14 4gjz_A Lysine-specific demethy 56.3 9.6 0.00033 31.4 3.9 65 150-222 125-222 (235)
15 3gja_A CYTC3; halogenase, beta 55.6 20 0.00069 32.0 6.1 26 197-225 221-246 (319)
16 3lwc_A Uncharacterized protein 45.2 21 0.0007 27.2 3.9 53 153-219 46-98 (119)
17 2hbt_A EGL nine homolog 1; pro 43.9 67 0.0023 27.6 7.4 69 149-223 119-199 (247)
18 3itq_A Prolyl 4-hydroxylase, a 32.9 65 0.0022 27.3 5.4 96 123-227 89-201 (216)
19 3rns_A Cupin 2 conserved barre 32.9 51 0.0017 27.6 4.8 58 151-221 41-98 (227)
20 3fjs_A Uncharacterized protein 25.5 1E+02 0.0036 22.5 4.9 60 149-221 38-97 (114)
21 2xdv_A MYC-induced nuclear ant 24.4 2.8E+02 0.0096 26.0 8.7 80 126-221 124-219 (442)
22 4diq_A Lysine-specific demethy 24.1 1.6E+02 0.0053 28.4 6.9 84 124-224 147-251 (489)
23 3al5_A HTYW5, JMJC domain-cont 23.7 54 0.0018 29.5 3.4 62 155-224 175-263 (338)
24 1vrb_A Putative asparaginyl hy 23.2 4E+02 0.014 23.8 9.2 26 196-224 216-241 (342)
25 3l2h_A Putative sugar phosphat 22.3 2E+02 0.0069 22.0 6.3 56 151-218 50-107 (162)
26 3emr_A ECTD; double stranded b 20.2 43 0.0015 29.7 2.0 26 197-225 229-254 (310)
No 1
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=100.00 E-value=2.9e-35 Score=258.93 Aligned_cols=157 Identities=31% Similarity=0.500 Sum_probs=133.7
Q ss_pred cccchh-hcccceeeeeecceeeeCCccccCCCCCCCchHHHHHHHHHHhhccCCCCCCCCCceEEeeecCCCCCCCccc
Q 024636 86 KSVKAG-VLLRKLRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGLGDTLGGHL 164 (265)
Q Consensus 86 ~~~~~~-~l~~klrW~tlG~~ydw~~~~Y~~~~p~~~~P~~L~~L~~~l~~~~~~~~~~~~p~a~iVN~Y~~g~~lg~H~ 164 (265)
+.++++ ....+|.|.+.+..|.|+...+....+|++||++|.+|+++++..+ ++..|.||+||||+|.+|++|++|+
T Consensus 45 ~~~s~~~~~~g~~~W~~d~~~Y~Ys~~~~~~~~pw~~~P~~L~~l~~~~~~~~--g~~~~~pn~~LvN~Y~~G~~i~~H~ 122 (211)
T 3i3q_A 45 YTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAA--GYPDFQPDACLINRYAPGAKLSLHQ 122 (211)
T ss_dssp CBCSSEEEEESSBEEEEETTEEEEESBCTTTSSBCCCCCHHHHHHHHHHHHHT--TCTTCCCCEEEEEEECTTCCEEEEC
T ss_pred CcCchhhcccccceeecCCCCcCcCCCccCCCCCCCchHHHHHHHHHHHHHhc--CCCCcCCCEEEEEEEcCCCCccccc
Confidence 345554 4556899999888899998885555689999999999999987654 4457899999999999999999999
Q ss_pred CCCCcCCCCCEEEEecCCceEEEeecCCCCCCCEEEEcCCCcEEEEcccccccccCCCceecCCcchhhhhhhcccCCCC
Q 024636 165 DDMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHGVPRIFTDRENAEIASLDLQFSHED 244 (265)
Q Consensus 165 D~~e~~~~~PIvSlSLG~~aiFl~~~~~~~~~~~~l~L~sGDvlvMsG~sR~~~HgVpri~~~~~~~~~~~~~~~~~~~~ 244 (265)
|..|.+++.||+|||||++|+|.|++.++.+....+.|++||++||+|++|+|+||||++..+..+.
T Consensus 123 D~~e~~~~~pI~svSLG~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r~~~H~I~~~~~~~~p~------------- 189 (211)
T 3i3q_A 123 DKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPL------------- 189 (211)
T ss_dssp CCCCSCTTSCEEEEEEESCEEEEECCSSTTSCCEEEEECTTCEEEECGGGTTCCEEECCCCCCCBTT-------------
T ss_pred CCCccccCCCEEEEECCCCeEEEEecccCCCceEEEECCCCCEEEECchHHceEeccCcccCCcCCC-------------
Confidence 9655556789999999999999999877777789999999999999999999889999998875421
Q ss_pred chhhhhccCCceeEEEeecc
Q 024636 245 DPFFLEYIRNSRININIRQV 264 (265)
Q Consensus 245 ~~~~~~y~~~~RINit~RqV 264 (265)
.++.|||||||++
T Consensus 190 -------~~~~RIsLTFR~~ 202 (211)
T 3i3q_A 190 -------TIDCRYNLTFRQA 202 (211)
T ss_dssp -------TBTCEEEEEEECC
T ss_pred -------CCCCEEEEEeeec
Confidence 3689999999987
No 2
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=99.96 E-value=3.7e-30 Score=225.06 Aligned_cols=137 Identities=21% Similarity=0.293 Sum_probs=113.6
Q ss_pred cceeeeee-cceeeeCCccccCCCCCCCchHHHHHHHHHHhhccCCCCCCCCCceEEeeecCCCC-CCCcccCCC-CcCC
Q 024636 95 RKLRWCTL-GLQFDWSKRNYNVSLPHKKIPDALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGLGD-TLGGHLDDM-EADW 171 (265)
Q Consensus 95 ~klrW~tl-G~~ydw~~~~Y~~~~p~~~~P~~L~~L~~~l~~~~~~~~~~~~p~a~iVN~Y~~g~-~lg~H~D~~-e~~~ 171 (265)
|+..|.+- |..|+|+.+.+.. .|||++|..|++.+.+.. +..||+||||+|.+|+ +||+|+|++ +..+
T Consensus 56 R~~~wyg~~~~~Y~Ysg~~~~~----~pwp~~L~~l~~~~~~~~-----g~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~ 126 (204)
T 3s57_A 56 RKQATYGDAGLTYTFSGLTLSP----KPWIPVLERIRDHVSGVT-----GQTFNFVLINRYKDGSDHICEHRDDERELAP 126 (204)
T ss_dssp SEEEEEECTTCCEEETTEEECC----EECCHHHHHHHHHHHHHH-----CCCCSEEEEEEESSTTCCEEEECCCCTTBCT
T ss_pred cEEEEECCCCCCcccCCCcccC----CCCCHHHHHHHHHHHHHh-----CCCCceeEEEEECCCCCcccceecChhhccC
Confidence 45677663 4789999998854 356889999999886644 5799999999999996 999999996 4456
Q ss_pred CCCEEEEecCCceEEEeecCC-------CCCCCEEEEcCCCcEEEEcccccccc-cCCCceecCCcchhhhhhhcccCCC
Q 024636 172 SKPIVSMSLGCKAIFLLGGKS-------REDPPLAMFLRSGDAVLMAGEARECF-HGVPRIFTDRENAEIASLDLQFSHE 243 (265)
Q Consensus 172 ~~PIvSlSLG~~aiFl~~~~~-------~~~~~~~l~L~sGDvlvMsG~sR~~~-HgVpri~~~~~~~~~~~~~~~~~~~ 243 (265)
+.+|+|||||++|+|.|+++. +......+.|++||++||+|++|..| ||||++...
T Consensus 127 ~~~IasvSLG~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~~---------------- 190 (204)
T 3s57_A 127 GSPIASVSFGASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKV---------------- 190 (204)
T ss_dssp TCCEEEEEEESCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETTHHHHEEEEECCCTTC----------------
T ss_pred CCcEEEEECCCceEEEEEEcCCCccccccCCceEEEECCCCCEEEECchhhheeEeeccccCCC----------------
Confidence 789999999999999999653 22357899999999999999998855 999997642
Q ss_pred CchhhhhccCCceeEEEeeccC
Q 024636 244 DDPFFLEYIRNSRININIRQVF 265 (265)
Q Consensus 244 ~~~~~~~y~~~~RINit~RqV~ 265 (265)
.+.|||||||+|+
T Consensus 191 ---------~~~RislTFR~i~ 203 (204)
T 3s57_A 191 ---------LAPRVNLTFRKIL 203 (204)
T ss_dssp ---------CSCEEEEEEECBC
T ss_pred ---------CCCEEEEEeeeec
Confidence 5899999999985
No 3
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=99.96 E-value=8.9e-30 Score=238.59 Aligned_cols=166 Identities=20% Similarity=0.289 Sum_probs=113.1
Q ss_pred hcccceeeeeecceeeeCCccccCCCCC-CCchHHHHHHHHHHhhccCCCCCCCCCceEEeeecCCCCCCCcccCCCCcC
Q 024636 92 VLLRKLRWCTLGLQFDWSKRNYNVSLPH-KKIPDALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGLGDTLGGHLDDMEAD 170 (265)
Q Consensus 92 ~l~~klrW~tlG~~ydw~~~~Y~~~~p~-~~~P~~L~~L~~~l~~~~~~~~~~~~p~a~iVN~Y~~g~~lg~H~D~~e~~ 170 (265)
..+.+.|++.+|+.|+|+++.+....++ .+||++|..|++++++.. +.++.||+||||+|.+|++|+||+|+++.
T Consensus 145 ~~l~~Rr~~~yG~~Y~Ys~~~~~~~~p~p~~~P~~L~~l~~r~~~~~---~~~~~~n~~lvN~Y~~G~~I~~H~D~~~~- 220 (345)
T 3tht_A 145 KSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICESFLEKWLRKG---YIKHKPDQMTINQYEPGQGIPAHIDTHSA- 220 (345)
T ss_dssp -----CEEECCC------------------CCCHHHHHHHHHHHHHT---SCSSCCSEEEEEEECTTCCEEEECCCTTT-
T ss_pred ccccCceEEEECCcccccccccccCCCCCcCcCHHHHHHHHHHHhcc---cCCCCCCEEEEEEecCCCCEeeccCCchh-
Confidence 3445566777999999999998765565 469999999999986532 33689999999999999999999999875
Q ss_pred CCCCEEEEecCCceEEEeecCCCCCCCEEEEcCCCcEEEEcccccccc-cCCCceecCCcchhhhhhhcccCCCCchhhh
Q 024636 171 WSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECF-HGVPRIFTDRENAEIASLDLQFSHEDDPFFL 249 (265)
Q Consensus 171 ~~~PIvSlSLG~~aiFl~~~~~~~~~~~~l~L~sGDvlvMsG~sR~~~-HgVpri~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (265)
++.+|+|||||++|+|.|++.. +....+.|++||++||+|++|+.| ||||+++.++.+...+.....++.+. ....
T Consensus 221 ~~~~I~slSLG~~~~f~f~~~~--~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~~d~~~~~~~~~~~~~~~~~-~~~~ 297 (345)
T 3tht_A 221 FEDEIVSLSLGSEIVMDFKHPD--GIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFDTVQASESLKSGIITSDV-GDLT 297 (345)
T ss_dssp BCSCEEEEEESSCEEEEEECTT--SCEEEEEECTTEEEEECTHHHHTSEEEECCCSEEEEESGGGSSCEECCSSS-SCEE
T ss_pred cCCeEEEEECCCceeEEEccCC--CceEEEEcCCCcEEEEChHHhhceEccCCcccCCccCcccccccccccccC-CCce
Confidence 6689999999999999999853 457899999999999999999877 99999999987654321111111100 0001
Q ss_pred hccCCceeEEEeecc
Q 024636 250 EYIRNSRININIRQV 264 (265)
Q Consensus 250 ~y~~~~RINit~RqV 264 (265)
.--++.|||||||.|
T Consensus 298 ~~~r~~RiSlT~R~v 312 (345)
T 3tht_A 298 LSKRGLRTSFTFRKV 312 (345)
T ss_dssp EEECCCEEEEEEECB
T ss_pred eccCCCEEEEEEEec
Confidence 123789999999987
No 4
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=99.95 E-value=9.1e-29 Score=220.80 Aligned_cols=137 Identities=22% Similarity=0.381 Sum_probs=108.7
Q ss_pred cceeeeeecceeeeCCccccCCCCCCCchHHHHHHHHHHhhccCCCCCCCCCceEEeeecCCC-CCCCcccCCCCc-CCC
Q 024636 95 RKLRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGLG-DTLGGHLDDMEA-DWS 172 (265)
Q Consensus 95 ~klrW~tlG~~ydw~~~~Y~~~~p~~~~P~~L~~L~~~l~~~~~~~~~~~~p~a~iVN~Y~~g-~~lg~H~D~~e~-~~~ 172 (265)
|...|.. ++.|+|+...+.. ..+||++|..|++.+.+.+ +..||+||||+|.+| |+|++|+|++.. ..+
T Consensus 83 R~~~~~g-~~~Y~Ys~~~~~~---~p~wp~~l~~l~~~~~~~~-----g~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~ 153 (238)
T 2iuw_A 83 RLTAWYG-ELPYTYSRITMEP---NPHWHPVLRTLKNRIEENT-----GHTFNSLLCNLYRNEKDSVDWHSDDEPSLGRC 153 (238)
T ss_dssp SEEEEEE-CCCTTSCHHHHCC---BSSCCHHHHHHHHHHHHHH-----SCCCCEEEEEEECSTTCCEEEECCCCGGGCSS
T ss_pred CeeEEcC-CCccccCCcccCC---CCCCCHHHHHHHHHHHHHh-----CCCCCEEEEEEECCCCCceeCCcCChhhcCCC
Confidence 3445643 2567777665532 3478999999988886644 468999999999999 599999999753 233
Q ss_pred CCEEEEecCCceEEEeecCCCC--------CCCEEEEcCCCcEEEEcccccccc-cCCCceecCCcchhhhhhhcccCCC
Q 024636 173 KPIVSMSLGCKAIFLLGGKSRE--------DPPLAMFLRSGDAVLMAGEARECF-HGVPRIFTDRENAEIASLDLQFSHE 243 (265)
Q Consensus 173 ~PIvSlSLG~~aiFl~~~~~~~--------~~~~~l~L~sGDvlvMsG~sR~~~-HgVpri~~~~~~~~~~~~~~~~~~~ 243 (265)
.+|+|||||++|+|.|++.... .....+.|++||+|||+|++|+.| ||||++..
T Consensus 154 ~~IaslSLG~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~----------------- 216 (238)
T 2iuw_A 154 PIIASLSFGATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYH----------------- 216 (238)
T ss_dssp CCEEEEEEESCEEEEEEECCC--------CCCEEEEEECTTCEEEEEETHHHHEEEEECCCSS-----------------
T ss_pred CcEEEEECCCCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEChhhhCccEecCCCcCC-----------------
Confidence 7999999999999999986531 357899999999999999998866 99998642
Q ss_pred CchhhhhccCCceeEEEeeccC
Q 024636 244 DDPFFLEYIRNSRININIRQVF 265 (265)
Q Consensus 244 ~~~~~~~y~~~~RINit~RqV~ 265 (265)
.++.|||||||+|.
T Consensus 217 --------~~~~RIsLTfR~v~ 230 (238)
T 2iuw_A 217 --------SREPRVNLTFRTVY 230 (238)
T ss_dssp --------CCCCEEEEEEECCC
T ss_pred --------CCCCEEEEEeeecc
Confidence 26899999999973
No 5
>3lfm_A Protein FTO; FAT MASS and obesity associated (FTO) protein, Fe2+/2-oxoGlu (2-OG)-dependent oxidative DNA/RNA demethylases, oxidoreduc; HET: 3DT OGA; 2.50A {Homo sapiens}
Probab=95.74 E-value=0.016 Score=55.57 Aligned_cols=76 Identities=26% Similarity=0.329 Sum_probs=51.5
Q ss_pred CCceEEeeecCC--------------C-CCCCcccCCCCcCCCCCEEEEe--cCC---------------ceEEEeecC-
Q 024636 145 QPEAAIVNYFGL--------------G-DTLGGHLDDMEADWSKPIVSMS--LGC---------------KAIFLLGGK- 191 (265)
Q Consensus 145 ~p~a~iVN~Y~~--------------g-~~lg~H~D~~e~~~~~PIvSlS--LG~---------------~aiFl~~~~- 191 (265)
.+|..||||+.+ | -.+|||.|..-.+.+ +|+..| -.. ++++.+|=+
T Consensus 188 ~fNvTLlN~Mdp~~m~~LKeEpyfgMGKmaVsWHhDenL~~~S-tVAVY~~sc~~~~~~~~~~~~~~~~d~~~W~Vglki 266 (495)
T 3lfm_A 188 AYNVTLLNFMDPQKMPYLKEEPYFGMGKMAVSWHHDENLVDRS-AVAVYSYSCEGPEEESEDDSHLEGRDPDIWHVGFKI 266 (495)
T ss_dssp CCCEEEEEEECSSCSSSCCBCSSSCCCBEEEEEECCCSBCTTC-CEEEEEEECCC-------------CCTTSEEEEEEE
T ss_pred eeehhhhhccCcccccccccccccCCcceeeeeccccccccCc-ceEEEEeecCCccccccccccCCCCCccceeEeeee
Confidence 789999999887 3 467899998776444 666444 321 333444322
Q ss_pred --CCCCCCEEEEcCCCcEEEEcccc-cccccCC
Q 024636 192 --SREDPPLAMFLRSGDAVLMAGEA-RECFHGV 221 (265)
Q Consensus 192 --~~~~~~~~l~L~sGDvlvMsG~s-R~~~HgV 221 (265)
.-..+.+.+.|++||++.|-+.. ..+.|+|
T Consensus 267 awDi~tP~L~vpL~sgd~Y~Mldd~N~~HqH~V 299 (495)
T 3lfm_A 267 SWDIETPGLAIPLHQGDCYFMLDDLNATHQHCV 299 (495)
T ss_dssp TTCCSSCEEEEEECTTCEEEECTTHHHHEEEEE
T ss_pred cccCCCCceeeecCCCCeeeecchhhhhhhhhh
Confidence 12245789999999999998776 5555665
No 6
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=90.42 E-value=0.98 Score=38.72 Aligned_cols=77 Identities=17% Similarity=0.215 Sum_probs=47.1
Q ss_pred CCCceEEeeecCCCCCCCcccCCCCcCCCCCEEEEecCC-ceEEEeecCC----------CCC-----CC-EEEEcCCCc
Q 024636 144 FQPEAAIVNYFGLGDTLGGHLDDMEADWSKPIVSMSLGC-KAIFLLGGKS----------RED-----PP-LAMFLRSGD 206 (265)
Q Consensus 144 ~~p~a~iVN~Y~~g~~lg~H~D~~e~~~~~PIvSlSLG~-~aiFl~~~~~----------~~~-----~~-~~l~L~sGD 206 (265)
+...-+-+|.|.+|+....|.|.... . ..|+=|+... ...+.|.... ..+ .+ ..+..+.|+
T Consensus 100 ~~i~~~W~~~~~~G~~~~~H~H~~~~-l-SgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~ 177 (216)
T 2rg4_A 100 LRLEDIWINILPEGGVHGSHIHPHSV-I-SGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGD 177 (216)
T ss_dssp CEEEEEEEEEECTTCCEEEECCTTCS-E-EEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTE
T ss_pred eEEeeEEEEEcCCCCcccCccCCCCe-E-EEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCe
Confidence 33456899999999999999985321 1 2344444421 1234443221 001 22 367889999
Q ss_pred EEEEcccccccccCCCcee
Q 024636 207 AVLMAGEARECFHGVPRIF 225 (265)
Q Consensus 207 vlvMsG~sR~~~HgVpri~ 225 (265)
+||+.+ . .+|+|....
T Consensus 178 lvlFpS--~-l~H~V~p~~ 193 (216)
T 2rg4_A 178 VLLWES--W-LRHEVPMNM 193 (216)
T ss_dssp EEEEET--T-SCEEECCCC
T ss_pred EEEECC--C-CEEeccCCC
Confidence 999954 3 679997754
No 7
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=84.41 E-value=1.5 Score=38.06 Aligned_cols=26 Identities=19% Similarity=0.197 Sum_probs=19.4
Q ss_pred CEEEEcCCCcEEEEcccccccccCCCcee
Q 024636 197 PLAMFLRSGDAVLMAGEARECFHGVPRIF 225 (265)
Q Consensus 197 ~~~l~L~sGDvlvMsG~sR~~~HgVpri~ 225 (265)
.+.+.++.||++++.+. .+||-....
T Consensus 210 ~v~~~~~aGdv~lf~~~---~~H~s~~N~ 235 (288)
T 2rdq_A 210 LLHSPMEPGDILLFHAH---MCHKSIPNL 235 (288)
T ss_dssp EECCCCCTTCEEEEETT---CCEEEECCC
T ss_pred eeecccCCCCEEEEeCC---ceecCCCCC
Confidence 35678899999999993 567765443
No 8
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=84.38 E-value=2.8 Score=36.50 Aligned_cols=26 Identities=23% Similarity=0.328 Sum_probs=20.5
Q ss_pred CEEEEcCCCcEEEEcccccccccCCCcee
Q 024636 197 PLAMFLRSGDAVLMAGEARECFHGVPRIF 225 (265)
Q Consensus 197 ~~~l~L~sGDvlvMsG~sR~~~HgVpri~ 225 (265)
.+.+.++.||++++.+. .+||.....
T Consensus 227 ~v~~~~~aGd~~~f~~~---~~H~s~~N~ 252 (291)
T 2opw_A 227 FVPTPVQRGALVLIHGE---VVHKSKQNL 252 (291)
T ss_dssp CEEECBCTTCEEEEETT---CEEEECCBC
T ss_pred eeecccCCCcEEEEcCC---ceecCCCCC
Confidence 56789999999999994 678765543
No 9
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=80.32 E-value=4.8 Score=35.40 Aligned_cols=27 Identities=19% Similarity=0.313 Sum_probs=21.0
Q ss_pred CCEEEEcCCCcEEEEcccccccccCCCcee
Q 024636 196 PPLAMFLRSGDAVLMAGEARECFHGVPRIF 225 (265)
Q Consensus 196 ~~~~l~L~sGDvlvMsG~sR~~~HgVpri~ 225 (265)
..+.+.++.||+++|.+. .+|+-....
T Consensus 214 ~~v~~~~~aGd~vlf~~~---~~H~s~~N~ 240 (308)
T 2a1x_A 214 ARVHLVMEKGDTVFFHPL---LIHGSGQNK 240 (308)
T ss_dssp CCEEECBCTTCEEEECTT---CCEEECCBC
T ss_pred CeEEccCCCccEEEECCC---ccccCCCCC
Confidence 457899999999999994 567765543
No 10
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=74.16 E-value=9.1 Score=33.60 Aligned_cols=26 Identities=12% Similarity=0.216 Sum_probs=20.5
Q ss_pred CEEEEcCCCcEEEEcccccccccCCCcee
Q 024636 197 PLAMFLRSGDAVLMAGEARECFHGVPRIF 225 (265)
Q Consensus 197 ~~~l~L~sGDvlvMsG~sR~~~HgVpri~ 225 (265)
.+.+.++.||++++.+. .+||-....
T Consensus 219 ~v~~~~~aGd~v~f~~~---l~H~s~~N~ 244 (313)
T 2fct_A 219 AVPMQMKAGQFIIFWST---LMHASYPHS 244 (313)
T ss_dssp CEEECBCTTEEEEEETT---SEEEECCBC
T ss_pred eeEeeeCCceEEEEeCC---ceeeCCCCC
Confidence 46788999999999994 577765554
No 11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=67.21 E-value=13 Score=31.25 Aligned_cols=102 Identities=19% Similarity=0.218 Sum_probs=59.6
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCceEEeeecCCCCCCCcccCCCCcC-------CCCCEEEEe-------cCCceEEEee
Q 024636 124 DALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGLGDTLGGHLDDMEAD-------WSKPIVSMS-------LGCKAIFLLG 189 (265)
Q Consensus 124 ~~L~~L~~~l~~~~~~~~~~~~p~a~iVN~Y~~g~~lg~H~D~~e~~-------~~~PIvSlS-------LG~~aiFl~~ 189 (265)
+.+..|.+++.... +.+-...+..-|+.|..|+.-.+|.|..... ...-++|+- -|...+|...
T Consensus 77 ~~~~~i~~ri~~~~--gl~~~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~ 154 (224)
T 2jig_A 77 SVISKIEKRVAQVT--MIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNA 154 (224)
T ss_dssp HHHHHHHHHHHHHH--TCCGGGBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTS
T ss_pred HHHHHHHHHHHHHh--CCCcccccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCc
Confidence 34566666665533 2211234567888999999999999974321 112244433 1333344211
Q ss_pred cCC-C-------CCCCEEEEcCCCcEEEEc-----ccc-cccccCCCceecC
Q 024636 190 GKS-R-------EDPPLAMFLRSGDAVLMA-----GEA-RECFHGVPRIFTD 227 (265)
Q Consensus 190 ~~~-~-------~~~~~~l~L~sGDvlvMs-----G~s-R~~~HgVpri~~~ 227 (265)
... + ....+++..+.|++|++. |.. ...+|++-.+...
T Consensus 155 ~~~~~~~~~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G 206 (224)
T 2jig_A 155 EQKVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKG 206 (224)
T ss_dssp SSCCCSTTSCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEES
T ss_pred ccccccccccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccc
Confidence 100 0 012578999999999994 444 5667999888754
No 12
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=62.85 E-value=17 Score=36.28 Aligned_cols=77 Identities=17% Similarity=0.193 Sum_probs=48.8
Q ss_pred CCceEEeeecCCCCCCCcccCCCCcCCCCC---EEEEec---------CCceEEEeecCCC----CCCCEEEEcCCCcEE
Q 024636 145 QPEAAIVNYFGLGDTLGGHLDDMEADWSKP---IVSMSL---------GCKAIFLLGGKSR----EDPPLAMFLRSGDAV 208 (265)
Q Consensus 145 ~p~a~iVN~Y~~g~~lg~H~D~~e~~~~~P---IvSlSL---------G~~aiFl~~~~~~----~~~~~~l~L~sGDvl 208 (265)
.++ +-++.|.+|+.+..|.|... ++- |+-++= |. +.-++..... .+....|.-..|.++
T Consensus 123 ~~D-~~~a~Y~~G~fL~~H~D~~~---~RrvS~VLYLN~pd~~W~~e~GG-eL~Lyd~d~~~~P~~d~~~~I~P~fNrLV 197 (633)
T 3kt7_A 123 KTD-MSINTYTKGCHLLTHDDVIG---SRRISFILYLPDPDRKWKSHYGG-GLRLFPSILPNVPHSDPSAKLVPQFNQIA 197 (633)
T ss_dssp CCC-EEEEEECTTCEEEEECCCCT---TEEEEEEEECSCTTSCCCGGGBC-CEEECCEEETTEECSSCSEEECCCTTEEE
T ss_pred cee-EEEEEeCCCCeeeecCCCCC---CeEEEEEEEcCCCCCCCCccCCc-eEEEecCCCcCCCCCCceEEEecCCCeEE
Confidence 455 66789999999999999632 121 222221 22 2333322211 234567888999999
Q ss_pred EEcccccccccCCCceec
Q 024636 209 LMAGEARECFHGVPRIFT 226 (265)
Q Consensus 209 vMsG~sR~~~HgVpri~~ 226 (265)
+|.-.-...||+|..+..
T Consensus 198 ~F~vsp~~S~H~V~eV~~ 215 (633)
T 3kt7_A 198 FFKVLPGFSFHDXEEVKV 215 (633)
T ss_dssp EEECCTTTCCEEECCBCS
T ss_pred EEEcCCCCCcCCCCccCC
Confidence 998764466899988875
No 13
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=57.53 E-value=8.3 Score=33.72 Aligned_cols=73 Identities=21% Similarity=0.297 Sum_probs=46.4
Q ss_pred ceEEeeecCCCCCCCcccCCCCcCCC----CCEEE----Eec-----CCceEEEeecCCCCCCCEEEEcCCCcEEEEccc
Q 024636 147 EAAIVNYFGLGDTLGGHLDDMEADWS----KPIVS----MSL-----GCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGE 213 (265)
Q Consensus 147 ~a~iVN~Y~~g~~lg~H~D~~e~~~~----~PIvS----lSL-----G~~aiFl~~~~~~~~~~~~l~L~sGDvlvMsG~ 213 (265)
+-..++.|.+|+.-++|.|....... .-++| +|- |..-+|.-. .....+.++.|+++++...
T Consensus 99 e~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~-----~~~~~V~P~~G~~v~F~s~ 173 (243)
T 3dkq_A 99 YPPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDT-----YGQQSIKLSAGSLVLYPSS 173 (243)
T ss_dssp EEEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEET-----TEEEEECCCTTCEEEEETT
T ss_pred ccceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeC-----CCcEEEecCCCEEEEECCC
Confidence 45889999999999999998643110 11222 222 222222211 1135788999999999764
Q ss_pred ccccccCCCceecC
Q 024636 214 ARECFHGVPRIFTD 227 (265)
Q Consensus 214 sR~~~HgVpri~~~ 227 (265)
..|+|..+...
T Consensus 174 ---~lH~v~pV~~G 184 (243)
T 3dkq_A 174 ---SLHQVTPVLSG 184 (243)
T ss_dssp ---SEEEECCEEEE
T ss_pred ---CeEcCcccccc
Confidence 46999888654
No 14
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=56.29 E-value=9.6 Score=31.43 Aligned_cols=65 Identities=22% Similarity=0.301 Sum_probs=41.5
Q ss_pred Eeeec--CCCCCCCcccCCCCcCCCCCEEEEecCCceEEEeecCCC-------------------------------CCC
Q 024636 150 IVNYF--GLGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKSR-------------------------------EDP 196 (265)
Q Consensus 150 iVN~Y--~~g~~lg~H~D~~e~~~~~PIvSlSLG~~aiFl~~~~~~-------------------------------~~~ 196 (265)
-+|.| ..|+.-+.|.|..+ -++..=-|..+..++-+... +..
T Consensus 125 ~~~~wiG~~gs~t~~H~D~~~-----n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~ 199 (235)
T 4gjz_A 125 TINAWFGPQGTISPLHQDPQQ-----NFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAP 199 (235)
T ss_dssp EEEEEEECTTCEEEEECCSSE-----EEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCC
T ss_pred ceEEEEeCCCCCceeeecccc-----ceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCC
Confidence 34544 33466678999754 24444468876666643210 113
Q ss_pred CEEEEcCCCcEEEEcccccccccCCC
Q 024636 197 PLAMFLRSGDAVLMAGEARECFHGVP 222 (265)
Q Consensus 197 ~~~l~L~sGDvlvMsG~sR~~~HgVp 222 (265)
.+.+.|++||+|.+.. .|||.|-
T Consensus 200 ~~~~~l~pGD~LyiP~---gW~H~V~ 222 (235)
T 4gjz_A 200 FLSCILSPGEILFIPV---KYWHYVR 222 (235)
T ss_dssp CEEEEECTTCEEEECT---TCEEEEE
T ss_pred cEEEEECCCCEEEeCC---CCcEEEE
Confidence 5788999999999975 5889874
No 15
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=55.65 E-value=20 Score=32.00 Aligned_cols=26 Identities=23% Similarity=0.364 Sum_probs=17.5
Q ss_pred CEEEEcCCCcEEEEcccccccccCCCcee
Q 024636 197 PLAMFLRSGDAVLMAGEARECFHGVPRIF 225 (265)
Q Consensus 197 ~~~l~L~sGDvlvMsG~sR~~~HgVpri~ 225 (265)
.+.+.++.||++++.+. .+||-....
T Consensus 221 ~v~~~~~aGd~v~f~~~---~~H~s~~N~ 246 (319)
T 3gja_A 221 AYPMVLKPGEAVIFWSN---TMHASLPHT 246 (319)
T ss_dssp CCBCCBCTTEEEEEETT---SCEEECCCC
T ss_pred eeEeeECCCeEEEEcCC---ccccCCCCC
Confidence 34567889999999885 355554433
No 16
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=45.19 E-value=21 Score=27.19 Aligned_cols=53 Identities=13% Similarity=0.198 Sum_probs=35.5
Q ss_pred ecCCCCCCCcccCCCCcCCCCCEEEEecCCceEEEeecCCCCCCCEEEEcCCCcEEEEccccccccc
Q 024636 153 YFGLGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFH 219 (265)
Q Consensus 153 ~Y~~g~~lg~H~D~~e~~~~~PIvSlSLG~~aiFl~~~~~~~~~~~~l~L~sGDvlvMsG~sR~~~H 219 (265)
...+|..+.+|.+..| -++.++ |. ..+.+++ ..+.|+.||++.+.....+.|.
T Consensus 46 ~~~pG~~~~~H~~~~E-----~~~Vl~-G~-~~~~~~g-------~~~~l~~GD~v~ip~g~~H~~~ 98 (119)
T 3lwc_A 46 RYAPGQSLTETMAVDD-----VMIVLE-GR-LSVSTDG-------ETVTAGPGEIVYMPKGETVTIR 98 (119)
T ss_dssp EECTTCEEEEECSSEE-----EEEEEE-EE-EEEEETT-------EEEEECTTCEEEECTTCEEEEE
T ss_pred EECCCCCcCccCCCCE-----EEEEEe-CE-EEEEECC-------EEEEECCCCEEEECCCCEEEEE
Confidence 3568889999974333 233444 44 5666643 2478999999999998875554
No 17
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=43.88 E-value=67 Score=27.63 Aligned_cols=69 Identities=14% Similarity=0.106 Sum_probs=41.3
Q ss_pred EEeeecCC-CCCCCcccCCCCcCCCCCEEE----Eec-------CCceEEEeecCCCCCCCEEEEcCCCcEEEEcccccc
Q 024636 149 AIVNYFGL-GDTLGGHLDDMEADWSKPIVS----MSL-------GCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARE 216 (265)
Q Consensus 149 ~iVN~Y~~-g~~lg~H~D~~e~~~~~PIvS----lSL-------G~~aiFl~~~~~~~~~~~~l~L~sGDvlvMsG~sR~ 216 (265)
+-+..|.+ |+...+|.|... ...=.+| ++= |.. +.|-.. .+.....+..+.|.+++|... +.
T Consensus 119 ~~~~~Y~~~G~~y~~H~D~~~--~~~R~~T~vlYLN~~w~~~~~GG~--l~~~~~-~~~~~~~v~P~~grlv~F~s~-~~ 192 (247)
T 2hbt_A 119 AMVACYPGNGTGYVRHVDNPN--GDGRCVTCIYYLNKDWDAKVSGGI--LRIFPE-GKAQFADIEPKFDRLLFFWSD-RR 192 (247)
T ss_dssp EEEEEECSSSCCEEEECSSCS--CCSEEEEEEEECBTTCCHHHHBCC--EEECCT-TCSSCEEECCBTTEEEEEECS-TT
T ss_pred EEEEEecCCCCcccccccCCC--CCCceEEEEEEeCCCCCCCCCcee--EEEecC-CCCceEEEEcCCCEEEEEecC-CC
Confidence 56778885 999999999832 1111222 221 221 111111 123456788899999999754 33
Q ss_pred cccCCCc
Q 024636 217 CFHGVPR 223 (265)
Q Consensus 217 ~~HgVpr 223 (265)
.+|+|..
T Consensus 193 ~~H~V~p 199 (247)
T 2hbt_A 193 NPHEVQP 199 (247)
T ss_dssp CCEEECC
T ss_pred ceeeecc
Confidence 6898865
No 18
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=32.89 E-value=65 Score=27.31 Aligned_cols=96 Identities=16% Similarity=0.194 Sum_probs=58.2
Q ss_pred hHHHHHHHHHHhhccCCCCCCCCCceEEeeecCCCCCCCcccCCCCcC----CCCCEEEEec-------CCceEEEeecC
Q 024636 123 PDALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGLGDTLGGHLDDMEAD----WSKPIVSMSL-------GCKAIFLLGGK 191 (265)
Q Consensus 123 P~~L~~L~~~l~~~~~~~~~~~~p~a~iVN~Y~~g~~lg~H~D~~e~~----~~~PIvSlSL-------G~~aiFl~~~~ 191 (265)
.+.+..|.++++... +..-...+..-|..|.+|+.-.+|.|..... .+.-++|+-+ |...+|.
T Consensus 89 ~~~v~~i~~Ri~~~~--gl~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp---- 162 (216)
T 3itq_A 89 NELTAKIEKRISSIM--NVPASHGEGLHILNYEVDQQYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFP---- 162 (216)
T ss_dssp CHHHHHHHHHHHHHH--TSCGGGBCCCEEEEECBTCCEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEET----
T ss_pred cHHHHHHHHHHHHhc--CceeccccceeEEEeCCCCccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEec----
Confidence 455666777776543 2211234667888899999999999975421 1122333321 2222221
Q ss_pred CCCCCCEEEEcCCCcEEEEccc-----c-cccccCCCceecC
Q 024636 192 SREDPPLAMFLRSGDAVLMAGE-----A-RECFHGVPRIFTD 227 (265)
Q Consensus 192 ~~~~~~~~l~L~sGDvlvMsG~-----s-R~~~HgVpri~~~ 227 (265)
...+++..+.|++|++..- . ....|++-.+...
T Consensus 163 ---~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G 201 (216)
T 3itq_A 163 ---KLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKG 201 (216)
T ss_dssp ---TTTEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEES
T ss_pred ---CCCCEEecCCCeEEEEeccCCCCCCCCccccccceeccc
Confidence 1246788999999999752 1 3457988887754
No 19
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=32.87 E-value=51 Score=27.57 Aligned_cols=58 Identities=5% Similarity=0.058 Sum_probs=39.7
Q ss_pred eeecCCCCCCCcccCCCCcCCCCCEEEEecCCceEEEeecCCCCCCCEEEEcCCCcEEEEcccccccccCC
Q 024636 151 VNYFGLGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHGV 221 (265)
Q Consensus 151 VN~Y~~g~~lg~H~D~~e~~~~~PIvSlSLG~~aiFl~~~~~~~~~~~~l~L~sGDvlvMsG~sR~~~HgV 221 (265)
+=.+.+|..++.|.-..+ .-+..++ |. ..|.+++. ...|+.||++++.....+.+.+.
T Consensus 41 ~~~~~~G~~~~~h~h~~~----~~~~Vl~-G~-~~~~i~~~-------~~~l~~Gd~~~~p~~~~H~~~a~ 98 (227)
T 3rns_A 41 LFSLAKDEEITAEAMLGN----RYYYCFN-GN-GEIFIENN-------KKTISNGDFLEITANHNYSIEAR 98 (227)
T ss_dssp EEEECTTCEEEECSCSSC----EEEEEEE-SE-EEEEESSC-------EEEEETTEEEEECSSCCEEEEES
T ss_pred EEEECCCCccCccccCCC----EEEEEEe-CE-EEEEECCE-------EEEECCCCEEEECCCCCEEEEEC
Confidence 334788999999975322 2344444 44 77888653 37899999999999876655544
No 20
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=25.53 E-value=1e+02 Score=22.49 Aligned_cols=60 Identities=15% Similarity=0.172 Sum_probs=39.2
Q ss_pred EEeeecCCCCCCCcccCCCCcCCCCCEEEEecCCceEEEeecCCCCCCCEEEEcCCCcEEEEcccccccccCC
Q 024636 149 AIVNYFGLGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHGV 221 (265)
Q Consensus 149 ~iVN~Y~~g~~lg~H~D~~e~~~~~PIvSlSLG~~aiFl~~~~~~~~~~~~l~L~sGDvlvMsG~sR~~~HgV 221 (265)
++.-.+.+|..+++|.-..+ -++-+-=|. ..|.+++. ...|++||++++.....+.+...
T Consensus 38 v~~~~l~~G~~~~~H~H~~~-----e~~~Vl~G~-~~~~i~~~-------~~~l~~Gd~i~ip~~~~H~~~~~ 97 (114)
T 3fjs_A 38 VMRMVLPAGKQVGSHSVAGP-----STIQCLEGE-VEIGVDGA-------QRRLHQGDLLYLGAGAAHDVNAI 97 (114)
T ss_dssp EEEEEECTTCEEEEECCSSC-----EEEEEEESC-EEEEETTE-------EEEECTTEEEEECTTCCEEEEES
T ss_pred EEEEEECCCCccCceeCCCc-----EEEEEEECE-EEEEECCE-------EEEECCCCEEEECCCCcEEEEeC
Confidence 33445688899999965432 233333344 77777653 48899999999999876555443
No 21
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=24.37 E-value=2.8e+02 Score=25.95 Aligned_cols=80 Identities=20% Similarity=0.214 Sum_probs=43.4
Q ss_pred HHHHHHHHhhccCCCCCCCCCceEEeeecCC-CCC--CCcccCCCCcCCCCCEEEEecCCceEEEeecCC----------
Q 024636 126 LCQLAKRLAAPAMPIGEEFQPEAAIVNYFGL-GDT--LGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKS---------- 192 (265)
Q Consensus 126 L~~L~~~l~~~~~~~~~~~~p~a~iVN~Y~~-g~~--lg~H~D~~e~~~~~PIvSlSLG~~aiFl~~~~~---------- 192 (265)
|..++..+.... +. .+.+|.|-. +.+ ++.|.|.... ++.-=-|..+.-++....
T Consensus 124 L~~l~~~l~~~~-----g~---~~~~n~y~~~~g~~g~~~H~D~~dv-----f~~Qv~G~Krw~l~~p~~pl~~~~s~d~ 190 (442)
T 2xdv_A 124 LWRIQEKLECYF-----GS---LVGSNVYITPAGSQGLPPHYDDVEV-----FILQLEGEKHWRLYHPTVPLAREYSVEA 190 (442)
T ss_dssp HHHHHHHHHHHH-----TS---CCEEEEEEECTTCBCSCSEECSSEE-----EEEEEESCEEEEEECCSSTTCSSCEECC
T ss_pred HHHHHHHHHHHh-----CC---CcccceEECCCCCCCccceECCcce-----EEEEEEeEEEEEEccCCCCccccCCCCc
Confidence 446666665433 22 244677754 344 4599996542 222234554333333221
Q ss_pred ---CCCCCEEEEcCCCcEEEEcccccccccCC
Q 024636 193 ---REDPPLAMFLRSGDAVLMAGEARECFHGV 221 (265)
Q Consensus 193 ---~~~~~~~l~L~sGDvlvMsG~sR~~~HgV 221 (265)
-......+.|++||+|.|... |||.+
T Consensus 191 ~~~~~~~~~~~~L~pGD~LYiP~g---~~H~~ 219 (442)
T 2xdv_A 191 EERIGRPVHEFMLKPGDLLYFPRG---TIHQA 219 (442)
T ss_dssp TTTSCSCSEEEEECTTCEEEECTT---CEEEE
T ss_pred hhhcCCcceEEEECCCcEEEECCC---ceEEE
Confidence 012346899999999999743 45544
No 22
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=24.07 E-value=1.6e+02 Score=28.38 Aligned_cols=84 Identities=20% Similarity=0.202 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCceEEeeecCC--C-CCCCcccCCCCcCCCCCEEEEecCCceEEEeecCC--------
Q 024636 124 DALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGL--G-DTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKS-------- 192 (265)
Q Consensus 124 ~~L~~L~~~l~~~~~~~~~~~~p~a~iVN~Y~~--g-~~lg~H~D~~e~~~~~PIvSlSLG~~aiFl~~~~~-------- 192 (265)
+.|..++..+.... +. .+-+|.|-. | .+++.|.|..+. ++.==.|. ..+.+....
T Consensus 147 p~l~~l~~~Le~~f-----g~---~v~~N~Y~tp~Gs~g~~pH~D~~Dv-----FllQv~G~-KrWrL~~P~~~~~~lp~ 212 (489)
T 4diq_A 147 TTVWQFLAVLQEQF-----GS---MAGSNVYLTPPNSQGFAPHYDDIEA-----FVLQLEGR-KLWRVYRPRAPTEELAL 212 (489)
T ss_dssp HHHHHHHHHHHHHH-----TS---CEEEEEEEECSSBCCSCCBCCSSEE-----EEEEEEEC-EEEEEECCSSGGGTTCS
T ss_pred hHHHHHHHHHHHHh-----CC---cccceEEecCCCcccccCccCCcce-----EEEEEeeE-EEEEEeCCCCccccCCC
Confidence 34556666664432 11 345677753 3 367799998652 22222444 333333211
Q ss_pred ----------CCCCCEEEEcCCCcEEEEcccccccccCCCce
Q 024636 193 ----------REDPPLAMFLRSGDAVLMAGEARECFHGVPRI 224 (265)
Q Consensus 193 ----------~~~~~~~l~L~sGDvlvMsG~sR~~~HgVpri 224 (265)
.......+.|++||+|.|.-. +||.+-..
T Consensus 213 ~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g---~~H~~~s~ 251 (489)
T 4diq_A 213 TSSPNFSQDDLGEPVLQTVLEPGDLLYFPRG---FIHQAECQ 251 (489)
T ss_dssp SCCCCCCGGGCCCCSEEEEECTTCEEEECTT---CEEEEEBC
T ss_pred cccccCCcccccCcceEEEECCCCEEEECCC---CceEEEec
Confidence 013346899999999999865 55655443
No 23
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=23.73 E-value=54 Score=29.46 Aligned_cols=62 Identities=23% Similarity=0.306 Sum_probs=39.5
Q ss_pred CCCCCCCcccCCCCcCCCCCEEEEecCCceEEEeecCC------------------C---------CCCCEEEEcCCCcE
Q 024636 155 GLGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKS------------------R---------EDPPLAMFLRSGDA 207 (265)
Q Consensus 155 ~~g~~lg~H~D~~e~~~~~PIvSlSLG~~aiFl~~~~~------------------~---------~~~~~~l~L~sGDv 207 (265)
..|.+.+.|.|..+ -+...=-|..+..++-+.. . ......+.|++||+
T Consensus 175 ~~g~~~~~H~D~~~-----n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~ 249 (338)
T 3al5_A 175 SPGLQLWTHYDVMD-----NLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDV 249 (338)
T ss_dssp CTTCEEEEECCSSE-----EEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCE
T ss_pred CCCCCccceECCcc-----cEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCE
Confidence 45578889999853 2333345766555554310 0 01257899999999
Q ss_pred EEEcccccccccCCCce
Q 024636 208 VLMAGEARECFHGVPRI 224 (265)
Q Consensus 208 lvMsG~sR~~~HgVpri 224 (265)
|.+... |||.|-..
T Consensus 250 LyiP~g---WwH~v~~l 263 (338)
T 3al5_A 250 LFIPAL---WFHNVISE 263 (338)
T ss_dssp EEECTT---CEEEEEES
T ss_pred EEECCC---CeEEEeeC
Confidence 999854 77877543
No 24
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=23.23 E-value=4e+02 Score=23.76 Aligned_cols=26 Identities=12% Similarity=0.151 Sum_probs=19.2
Q ss_pred CCEEEEcCCCcEEEEcccccccccCCCce
Q 024636 196 PPLAMFLRSGDAVLMAGEARECFHGVPRI 224 (265)
Q Consensus 196 ~~~~l~L~sGDvlvMsG~sR~~~HgVpri 224 (265)
....+.|++||+|.|.. .|||.|-..
T Consensus 216 ~~~~~~L~pGD~LyiP~---gwwH~v~s~ 241 (342)
T 1vrb_A 216 DAEIVNLTPGTMLYLPR---GLWHSTKSD 241 (342)
T ss_dssp SSEEEEECTTCEEEECT---TCEEEEECS
T ss_pred CceEEEECCCcEEEeCC---CccEEEEEC
Confidence 35789999999999975 356665443
No 25
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=22.34 E-value=2e+02 Score=22.02 Aligned_cols=56 Identities=18% Similarity=0.220 Sum_probs=33.9
Q ss_pred eeecCCCC-CCCcccCCCCcCCCCCEEEEecCCceEEEeecCCCCCCCEEEEcCCCcEEEEccc-ccccc
Q 024636 151 VNYFGLGD-TLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGE-ARECF 218 (265)
Q Consensus 151 VN~Y~~g~-~lg~H~D~~e~~~~~PIvSlSLG~~aiFl~~~~~~~~~~~~l~L~sGDvlvMsG~-sR~~~ 218 (265)
+-...+|. ...+|.-.... .-++.++ |. ..|.+++. .+.|+.||++++... ..+.+
T Consensus 50 ~~~l~pg~~~~~~H~H~~~~---E~~~Vl~-G~-~~~~~~~~-------~~~l~~Gd~i~i~~~~~~H~~ 107 (162)
T 3l2h_A 50 LIQIEPGKESTEYHLHHYEE---EAVYVLS-GK-GTLTMEND-------QYPIAPGDFVGFPCHAAAHSI 107 (162)
T ss_dssp EEEECTTCBSSSSBEESSCC---EEEEEEE-SC-EEEEETTE-------EEEECTTCEEEECTTSCCEEE
T ss_pred EEEECCCCcCCCCccCCCCC---EEEEEEE-EE-EEEEECCE-------EEEeCCCCEEEECCCCceEEe
Confidence 34456776 68888752211 1233333 44 66776542 488999999999975 54433
No 26
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=20.25 E-value=43 Score=29.67 Aligned_cols=26 Identities=15% Similarity=0.195 Sum_probs=19.7
Q ss_pred CEEEEcCCCcEEEEcccccccccCCCcee
Q 024636 197 PLAMFLRSGDAVLMAGEARECFHGVPRIF 225 (265)
Q Consensus 197 ~~~l~L~sGDvlvMsG~sR~~~HgVpri~ 225 (265)
.+.+.++.||+++|.+. .+||-....
T Consensus 229 ~v~~~~~aGdvl~f~~~---~~H~s~~N~ 254 (310)
T 3emr_A 229 ISVPTGKAGSVTLFESN---TMHGSTSNI 254 (310)
T ss_dssp CBCCCBSTTCEEEEETT---CCEEECCCC
T ss_pred eEEeeeCCceEEEEeCC---ceecCCCCC
Confidence 45678999999999994 567765543
Done!