Query 024637
Match_columns 265
No_of_seqs 384 out of 1556
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 06:15:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024637.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024637hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0253 Synaptic vesicle trans 99.9 1.7E-26 3.8E-31 179.7 16.1 245 1-256 273-527 (528)
2 TIGR01299 synapt_SV2 synaptic 99.9 3.2E-22 7E-27 174.8 19.3 144 110-255 597-740 (742)
3 KOG0569 Permease of the major 99.9 3E-21 6.6E-26 159.4 16.0 204 48-263 254-469 (485)
4 TIGR01299 synapt_SV2 synaptic 99.9 8.5E-20 1.8E-24 159.7 20.1 181 60-252 165-358 (742)
5 TIGR00887 2A0109 phosphate:H+ 99.9 2.4E-20 5.3E-25 159.3 16.1 199 51-261 273-501 (502)
6 TIGR02332 HpaX 4-hydroxyphenyl 99.8 3.8E-19 8.3E-24 148.3 19.3 182 60-252 6-193 (412)
7 COG2814 AraJ Arabinose efflux 99.8 6.3E-19 1.4E-23 141.8 19.1 181 58-249 9-189 (394)
8 PRK03545 putative arabinose tr 99.8 7.8E-19 1.7E-23 145.6 19.6 177 63-250 10-186 (390)
9 PRK10642 proline/glycine betai 99.8 1.2E-18 2.7E-23 148.4 21.2 194 51-256 240-437 (490)
10 PRK10213 nepI ribonucleoside t 99.8 1E-18 2.2E-23 144.9 19.9 181 60-251 18-198 (394)
11 TIGR00898 2A0119 cation transp 99.8 1.1E-18 2.3E-23 149.5 19.6 188 50-258 314-504 (505)
12 PRK11663 regulatory protein Uh 99.8 2E-18 4.3E-23 145.0 18.5 175 65-250 26-200 (434)
13 PRK14995 methyl viologen resis 99.8 3E-18 6.5E-23 146.2 19.8 180 61-251 5-185 (495)
14 PF07690 MFS_1: Major Facilita 99.8 3.7E-18 8.1E-23 139.3 19.4 169 70-249 4-173 (352)
15 TIGR00891 2A0112 putative sial 99.8 5.4E-18 1.2E-22 141.0 20.4 182 58-251 8-191 (405)
16 TIGR00710 efflux_Bcr_CflA drug 99.8 2.2E-18 4.8E-23 142.4 17.9 171 72-253 15-185 (385)
17 PLN00028 nitrate transmembrane 99.8 4.5E-18 9.7E-23 144.3 19.9 180 57-248 31-219 (476)
18 PRK11551 putative 3-hydroxyphe 99.8 2.7E-18 5.8E-23 143.1 18.2 181 60-251 13-193 (406)
19 COG2271 UhpC Sugar phosphate p 99.8 3.5E-19 7.6E-24 142.0 11.4 184 58-252 25-210 (448)
20 PRK10054 putative transporter; 99.8 3.5E-18 7.7E-23 141.7 17.8 174 63-247 8-181 (395)
21 PRK10504 putative transporter; 99.8 5.6E-18 1.2E-22 143.9 19.2 180 60-250 8-187 (471)
22 TIGR00895 2A0115 benzoate tran 99.8 3E-18 6.4E-23 142.1 16.3 181 60-251 15-195 (398)
23 TIGR00711 efflux_EmrB drug res 99.8 3.2E-18 7E-23 145.8 16.4 176 65-251 5-180 (485)
24 PRK03893 putative sialic acid 99.8 1.1E-17 2.4E-22 142.9 19.4 174 51-235 9-182 (496)
25 TIGR00924 yjdL_sub1_fam amino 99.8 9.9E-18 2.1E-22 141.9 18.4 176 62-245 10-189 (475)
26 PRK12307 putative sialic acid 99.8 1.3E-17 2.8E-22 139.8 19.0 164 60-234 16-179 (426)
27 PRK03699 putative transporter; 99.8 2.6E-17 5.7E-22 136.6 20.5 176 59-245 4-180 (394)
28 PRK10091 MFS transport protein 99.8 1E-17 2.2E-22 138.5 17.8 178 64-252 5-182 (382)
29 PRK11551 putative 3-hydroxyphe 99.8 1.7E-17 3.8E-22 138.2 18.8 170 68-248 226-396 (406)
30 TIGR00893 2A0114 d-galactonate 99.8 4E-18 8.7E-23 141.0 14.6 164 77-251 9-172 (399)
31 PRK15403 multidrug efflux syst 99.8 1.6E-17 3.5E-22 138.6 18.1 149 104-252 47-195 (413)
32 PRK15462 dipeptide/tripeptide 99.8 1.8E-17 3.9E-22 139.0 18.3 176 60-245 7-186 (493)
33 TIGR00903 2A0129 major facilit 99.8 1E-17 2.2E-22 137.4 16.4 167 74-252 3-169 (368)
34 COG2271 UhpC Sugar phosphate p 99.8 3.3E-18 7.2E-23 136.5 12.6 178 61-248 251-434 (448)
35 PRK15402 multidrug efflux syst 99.8 2.3E-17 5E-22 137.5 18.3 149 104-252 44-192 (406)
36 TIGR00900 2A0121 H+ Antiporter 99.8 1.5E-17 3.2E-22 136.4 16.9 144 104-247 30-178 (365)
37 PRK10207 dipeptide/tripeptide 99.8 1.7E-17 3.7E-22 140.7 17.7 175 59-243 11-189 (489)
38 PRK10489 enterobactin exporter 99.8 1.3E-17 2.8E-22 139.5 16.5 175 79-263 240-414 (417)
39 PRK11652 emrD multidrug resist 99.8 3.6E-17 7.7E-22 135.8 18.9 183 59-252 5-187 (394)
40 TIGR00879 SP MFS transporter, 99.8 6.8E-18 1.5E-22 143.2 14.9 182 64-256 286-478 (481)
41 PRK10077 xylE D-xylose transpo 99.8 8.7E-17 1.9E-21 136.9 21.5 174 78-262 287-471 (479)
42 PRK10473 multidrug efflux syst 99.8 2.7E-17 5.9E-22 136.4 17.7 164 78-252 19-182 (392)
43 PRK11646 multidrug resistance 99.8 4.7E-17 1E-21 135.3 18.9 171 69-250 17-187 (400)
44 PRK11273 glpT sn-glycerol-3-ph 99.8 2.1E-17 4.5E-22 139.6 16.2 169 71-251 38-211 (452)
45 TIGR00886 2A0108 nitrite extru 99.8 4.4E-17 9.4E-22 133.9 17.5 173 64-247 3-187 (366)
46 TIGR00890 2A0111 Oxalate/Forma 99.8 1.7E-17 3.7E-22 136.5 14.4 168 69-248 10-177 (377)
47 PRK09952 shikimate transporter 99.8 2.5E-16 5.5E-21 132.4 21.3 173 68-251 256-435 (438)
48 TIGR00881 2A0104 phosphoglycer 99.8 9.9E-18 2.1E-22 138.0 11.9 169 72-251 5-174 (379)
49 PRK09874 drug efflux system pr 99.7 1.8E-16 3.9E-21 132.2 19.1 174 66-251 18-196 (408)
50 PRK09556 uhpT sugar phosphate 99.7 1.4E-16 3E-21 135.1 18.2 175 63-247 259-448 (467)
51 KOG1330 Sugar transporter/spin 99.7 7.9E-19 1.7E-23 141.3 4.1 186 60-256 31-217 (493)
52 PRK11043 putative transporter; 99.7 3.2E-16 6.9E-21 130.5 19.9 147 104-250 37-183 (401)
53 PRK05122 major facilitator sup 99.7 1.6E-16 3.5E-21 132.1 18.0 170 62-241 15-192 (399)
54 PRK09556 uhpT sugar phosphate 99.7 1.9E-17 4.2E-22 140.3 12.4 175 62-247 29-211 (467)
55 PRK10642 proline/glycine betai 99.7 6.4E-16 1.4E-20 131.8 21.7 138 114-252 63-216 (490)
56 PRK11102 bicyclomycin/multidru 99.7 7.9E-17 1.7E-21 132.9 15.7 148 104-251 22-169 (377)
57 PRK10406 alpha-ketoglutarate t 99.7 5.6E-16 1.2E-20 130.2 20.9 180 64-252 24-222 (432)
58 PRK12307 putative sialic acid 99.7 2.5E-16 5.5E-21 132.1 18.4 168 51-229 220-389 (426)
59 PRK12382 putative transporter; 99.7 3.8E-16 8.2E-21 129.6 19.3 160 67-236 20-187 (392)
60 PRK15034 nitrate/nitrite trans 99.7 9.4E-16 2E-20 127.5 21.4 179 61-250 33-234 (462)
61 TIGR00712 glpT glycerol-3-phos 99.7 7.4E-17 1.6E-21 135.7 14.8 178 62-251 27-209 (438)
62 TIGR00887 2A0109 phosphate:H+ 99.7 4.5E-16 9.8E-21 133.1 19.7 148 105-253 53-229 (502)
63 PRK09528 lacY galactoside perm 99.7 2E-16 4.3E-21 132.5 17.1 146 105-250 259-405 (420)
64 PRK11663 regulatory protein Uh 99.7 2.4E-16 5.3E-21 132.4 17.5 181 63-253 244-429 (434)
65 PRK10406 alpha-ketoglutarate t 99.7 8.4E-16 1.8E-20 129.1 20.3 184 51-247 234-423 (432)
66 PRK11273 glpT sn-glycerol-3-ph 99.7 5.4E-16 1.2E-20 131.0 19.2 181 63-253 254-441 (452)
67 PRK10077 xylE D-xylose transpo 99.7 3.2E-16 7E-21 133.4 17.4 148 104-252 51-218 (479)
68 TIGR00889 2A0110 nucleoside tr 99.7 2.6E-16 5.6E-21 131.4 16.2 147 108-254 251-408 (418)
69 TIGR00879 SP MFS transporter, 99.7 1.4E-16 3.1E-21 135.1 14.9 146 105-251 68-219 (481)
70 TIGR00897 2A0118 polyol permea 99.7 4.1E-16 9E-21 129.8 17.2 162 62-234 13-179 (402)
71 cd06174 MFS The Major Facilita 99.7 2.8E-16 6.1E-21 128.0 15.8 167 68-245 5-171 (352)
72 PRK09584 tppB putative tripept 99.7 5.2E-16 1.1E-20 132.2 18.0 171 61-241 20-194 (500)
73 PRK03633 putative MFS family t 99.7 1E-15 2.2E-20 126.6 19.1 154 60-224 4-157 (381)
74 PRK15075 citrate-proton sympor 99.7 1.2E-15 2.7E-20 128.2 19.5 151 66-226 242-397 (434)
75 PRK09705 cynX putative cyanate 99.7 7.8E-16 1.7E-20 127.7 18.0 151 78-240 25-176 (393)
76 TIGR00893 2A0114 d-galactonate 99.7 4.7E-16 1E-20 128.7 16.6 181 51-245 207-396 (399)
77 TIGR00892 2A0113 monocarboxyla 99.7 4.6E-16 1E-20 131.4 16.7 158 79-248 36-194 (455)
78 TIGR00883 2A0106 metabolite-pr 99.7 9.6E-16 2.1E-20 126.9 17.7 174 50-234 208-387 (394)
79 TIGR00894 2A0114euk Na(+)-depe 99.7 2E-16 4.3E-21 134.2 13.6 149 102-250 70-221 (465)
80 PRK03699 putative transporter; 99.7 1E-15 2.2E-20 127.2 17.3 175 63-248 206-380 (394)
81 TIGR00899 2A0120 sugar efflux 99.7 1.3E-15 2.7E-20 125.6 17.8 171 71-251 6-179 (375)
82 PRK11195 lysophospholipid tran 99.7 1.1E-15 2.4E-20 126.8 17.1 142 105-251 35-176 (393)
83 TIGR00880 2_A_01_02 Multidrug 99.7 8.7E-16 1.9E-20 108.4 14.0 134 117-250 7-140 (141)
84 PRK09705 cynX putative cyanate 99.7 2.4E-15 5.2E-20 124.8 18.5 176 67-255 210-388 (393)
85 COG2223 NarK Nitrate/nitrite t 99.7 1.3E-15 2.8E-20 121.8 15.9 181 57-250 9-195 (417)
86 PRK10489 enterobactin exporter 99.7 1E-15 2.2E-20 128.1 15.9 143 105-247 49-196 (417)
87 PRK15075 citrate-proton sympor 99.7 5.2E-15 1.1E-19 124.4 19.8 161 63-234 16-198 (434)
88 TIGR00890 2A0111 Oxalate/Forma 99.7 1E-15 2.2E-20 126.0 15.2 136 105-240 237-374 (377)
89 PRK15011 sugar efflux transpor 99.7 6.1E-15 1.3E-19 122.5 19.8 160 77-247 231-390 (393)
90 PRK05122 major facilitator sup 99.7 7.2E-15 1.6E-19 122.2 20.0 138 111-248 252-389 (399)
91 cd06174 MFS The Major Facilita 99.7 5.2E-15 1.1E-19 120.5 18.4 171 66-246 179-350 (352)
92 TIGR00885 fucP L-fucose:H+ sym 99.7 5.6E-15 1.2E-19 123.0 18.7 170 64-244 5-203 (410)
93 KOG3764 Vesicular amine transp 99.7 1.8E-16 3.9E-21 125.5 9.1 149 104-252 102-251 (464)
94 PRK09952 shikimate transporter 99.7 1.7E-14 3.7E-19 121.4 21.6 136 116-252 72-223 (438)
95 PF00083 Sugar_tr: Sugar (and 99.7 7.8E-20 1.7E-24 154.4 -11.0 200 50-262 239-450 (451)
96 TIGR00902 2A0127 phenyl propri 99.7 8.3E-15 1.8E-19 121.2 19.1 177 51-243 197-374 (382)
97 KOG0252 Inorganic phosphate tr 99.7 4.6E-17 1E-21 130.9 5.3 206 53-262 295-511 (538)
98 PRK03545 putative arabinose tr 99.7 8.5E-15 1.8E-19 121.5 18.7 143 104-248 237-380 (390)
99 TIGR00897 2A0118 polyol permea 99.7 8E-15 1.7E-19 122.1 18.6 170 65-247 225-400 (402)
100 PF11700 ATG22: Vacuole efflux 99.7 8.4E-15 1.8E-19 123.1 17.7 178 61-248 280-468 (477)
101 TIGR00899 2A0120 sugar efflux 99.7 1.7E-14 3.7E-19 118.9 19.2 143 104-247 231-373 (375)
102 TIGR00895 2A0115 benzoate tran 99.7 3.7E-15 8.1E-20 123.6 15.0 155 55-220 243-397 (398)
103 TIGR00891 2A0112 putative sial 99.7 6.9E-15 1.5E-19 122.4 16.5 146 74-229 250-397 (405)
104 TIGR00898 2A0119 cation transp 99.7 2.8E-15 6.1E-20 128.5 14.2 141 107-251 126-266 (505)
105 TIGR00903 2A0129 major facilit 99.6 8.7E-15 1.9E-19 120.1 16.3 175 52-246 185-363 (368)
106 PRK10133 L-fucose transporter; 99.6 4E-14 8.7E-19 118.9 20.4 151 60-221 24-177 (438)
107 TIGR00806 rfc RFC reduced fola 99.6 2.7E-14 5.9E-19 117.4 18.2 157 79-248 43-203 (511)
108 TIGR00712 glpT glycerol-3-phos 99.6 5.8E-15 1.3E-19 124.3 14.3 174 69-252 258-437 (438)
109 PRK03893 putative sialic acid 99.6 1.6E-14 3.5E-19 123.5 16.7 148 80-237 293-442 (496)
110 PRK09874 drug efflux system pr 99.6 1E-14 2.2E-19 121.7 15.1 138 111-248 261-398 (408)
111 KOG0255 Synaptic vesicle trans 99.6 6.2E-15 1.3E-19 126.8 14.1 145 105-253 115-259 (521)
112 PRK12382 putative transporter; 99.6 4.3E-14 9.3E-19 117.3 18.5 139 110-248 251-389 (392)
113 KOG2615 Permease of the major 99.6 6.6E-15 1.4E-19 116.1 12.5 117 105-222 65-181 (451)
114 PRK03633 putative MFS family t 99.6 5.7E-14 1.2E-18 116.2 18.8 154 80-247 218-371 (381)
115 PLN00028 nitrate transmembrane 99.6 2.7E-14 5.7E-19 121.4 16.8 172 65-248 255-433 (476)
116 TIGR00805 oat sodium-independe 99.6 4E-15 8.6E-20 129.8 12.0 145 104-248 64-281 (633)
117 PRK06814 acylglycerophosphoeth 99.6 5E-14 1.1E-18 131.6 20.1 139 109-247 53-194 (1140)
118 PTZ00207 hypothetical protein; 99.6 9.7E-14 2.1E-18 118.7 19.9 160 74-248 39-205 (591)
119 TIGR00882 2A0105 oligosacchari 99.6 7.7E-14 1.7E-18 116.0 18.5 141 106-246 252-393 (396)
120 COG2223 NarK Nitrate/nitrite t 99.6 1.5E-14 3.3E-19 115.8 13.5 177 61-248 217-401 (417)
121 TIGR00894 2A0114euk Na(+)-depe 99.6 3.1E-14 6.8E-19 120.8 16.4 184 51-248 253-450 (465)
122 TIGR00792 gph sugar (Glycoside 99.6 5.4E-14 1.2E-18 118.4 17.5 119 108-226 257-383 (437)
123 PRK15011 sugar efflux transpor 99.6 2.1E-13 4.6E-18 113.2 20.6 172 70-252 23-198 (393)
124 TIGR00900 2A0121 H+ Antiporter 99.6 2.4E-14 5.2E-19 117.4 14.6 122 104-225 243-365 (365)
125 TIGR02332 HpaX 4-hydroxyphenyl 99.6 3.8E-14 8.3E-19 118.3 15.6 165 63-236 243-409 (412)
126 COG2814 AraJ Arabinose efflux 99.6 1.2E-13 2.7E-18 111.4 17.8 168 69-248 218-386 (394)
127 KOG0254 Predicted transporter 99.6 4.3E-14 9.4E-19 121.2 15.9 143 109-253 90-234 (513)
128 PRK08633 2-acyl-glycerophospho 99.6 1.2E-13 2.6E-18 129.3 20.1 116 108-223 47-165 (1146)
129 KOG2532 Permease of the major 99.6 1.3E-13 2.8E-18 115.4 18.1 149 102-250 67-218 (466)
130 PF03825 Nuc_H_symport: Nucleo 99.6 1.7E-13 3.6E-18 113.2 18.6 185 53-250 201-397 (400)
131 COG3104 PTR2 Dipeptide/tripept 99.6 2.8E-14 6.1E-19 116.7 13.8 184 60-249 19-207 (498)
132 PF05977 MFS_3: Transmembrane 99.6 2.2E-13 4.7E-18 115.9 19.3 145 105-249 42-191 (524)
133 PRK11128 putative 3-phenylprop 99.6 2.2E-13 4.8E-18 112.7 18.6 136 104-241 236-372 (382)
134 PF06609 TRI12: Fungal trichot 99.6 1.5E-13 3.2E-18 117.0 17.7 136 108-244 78-213 (599)
135 PRK10504 putative transporter; 99.6 4.4E-13 9.5E-18 114.0 20.7 123 104-226 293-418 (471)
136 PF05977 MFS_3: Transmembrane 99.6 1.6E-13 3.4E-18 116.7 17.2 143 104-246 250-392 (524)
137 TIGR02718 sider_RhtX_FptX side 99.6 2.3E-13 5E-18 112.9 17.9 179 51-243 200-386 (390)
138 PF01306 LacY_symp: LacY proto 99.6 9E-14 2E-18 113.3 15.0 147 107-253 258-405 (412)
139 PRK11010 ampG muropeptide tran 99.6 3.6E-13 7.7E-18 114.8 19.3 176 62-251 12-197 (491)
140 PRK09528 lacY galactoside perm 99.6 1.9E-13 4.1E-18 114.5 17.4 177 63-250 11-193 (420)
141 PRK11010 ampG muropeptide tran 99.6 3.8E-13 8.2E-18 114.7 19.4 145 104-248 254-403 (491)
142 TIGR00882 2A0105 oligosacchari 99.6 1.9E-13 4E-18 113.7 17.1 175 63-250 3-185 (396)
143 PRK11902 ampG muropeptide tran 99.6 4.9E-13 1.1E-17 111.4 19.1 170 68-251 5-184 (402)
144 KOG0252 Inorganic phosphate tr 99.6 7.1E-14 1.5E-18 112.9 13.3 195 57-254 36-251 (538)
145 PRK15034 nitrate/nitrite trans 99.6 1.6E-13 3.4E-18 114.3 15.3 175 62-248 252-454 (462)
146 COG2270 Permeases of the major 99.6 2.4E-13 5.2E-18 109.1 15.2 144 104-247 284-428 (438)
147 TIGR01301 GPH_sucrose GPH fami 99.6 7.7E-13 1.7E-17 110.9 19.0 179 63-252 5-222 (477)
148 TIGR00896 CynX cyanate transpo 99.6 1.6E-13 3.5E-18 112.4 14.6 146 81-239 19-166 (355)
149 KOG0255 Synaptic vesicle trans 99.5 5.1E-13 1.1E-17 115.0 18.1 195 50-263 309-507 (521)
150 TIGR00892 2A0113 monocarboxyla 99.5 6.3E-14 1.4E-18 118.5 12.2 166 66-242 245-415 (455)
151 TIGR00883 2A0106 metabolite-pr 99.5 3.6E-13 7.8E-18 111.5 16.4 125 119-243 46-186 (394)
152 KOG0254 Predicted transporter 99.5 3.8E-13 8.3E-18 115.4 16.9 199 51-261 283-496 (513)
153 TIGR00901 2A0125 AmpG-related 99.5 4.1E-13 8.8E-18 110.1 16.2 146 104-251 19-181 (356)
154 TIGR00881 2A0104 phosphoglycer 99.5 1.1E-13 2.4E-18 114.0 12.4 154 66-229 220-378 (379)
155 PRK09669 putative symporter Ya 99.5 5.7E-13 1.2E-17 112.4 16.7 116 111-226 267-391 (444)
156 TIGR01272 gluP glucose/galacto 99.5 1.7E-12 3.6E-17 104.2 18.5 160 62-232 140-299 (310)
157 PRK15402 multidrug efflux syst 99.5 8.9E-13 1.9E-17 110.0 16.9 140 104-244 247-391 (406)
158 TIGR00902 2A0127 phenyl propri 99.5 1.5E-12 3.2E-17 107.8 17.6 156 69-237 11-168 (382)
159 PRK11128 putative 3-phenylprop 99.5 1.4E-12 3E-17 108.0 17.1 155 74-243 16-174 (382)
160 KOG0569 Permease of the major 99.5 8.8E-13 1.9E-17 109.7 15.1 142 111-253 63-209 (485)
161 TIGR00896 CynX cyanate transpo 99.5 1.5E-12 3.1E-17 106.8 16.0 145 70-226 205-351 (355)
162 PRK10429 melibiose:sodium symp 99.5 1.2E-12 2.7E-17 111.2 15.6 119 108-226 266-396 (473)
163 KOG2504 Monocarboxylate transp 99.5 3.9E-13 8.4E-18 113.9 12.4 176 62-248 298-476 (509)
164 PRK10133 L-fucose transporter; 99.5 3.7E-12 8E-17 107.1 18.1 132 104-238 291-423 (438)
165 PF13347 MFS_2: MFS/sugar tran 99.5 2.7E-12 5.8E-17 107.9 17.2 164 48-226 214-387 (428)
166 PRK10054 putative transporter; 99.5 2.7E-12 5.8E-17 106.7 16.8 140 105-245 241-381 (395)
167 PRK11902 ampG muropeptide tran 99.5 6.3E-12 1.4E-16 104.8 18.2 141 104-248 241-390 (402)
168 PRK09848 glucuronide transport 99.5 2.4E-12 5.3E-17 108.7 15.7 163 51-226 220-391 (448)
169 PRK11646 multidrug resistance 99.5 3.1E-12 6.7E-17 106.5 15.7 152 81-243 227-383 (400)
170 PRK10091 MFS transport protein 99.5 5.1E-12 1.1E-16 104.6 16.9 143 104-248 231-376 (382)
171 TIGR00901 2A0125 AmpG-related 99.5 1.2E-12 2.7E-17 107.2 12.8 146 51-207 198-355 (356)
172 KOG2504 Monocarboxylate transp 99.5 9.2E-13 2E-17 111.6 12.2 175 63-249 47-222 (509)
173 COG0738 FucP Fucose permease [ 99.4 1.4E-11 3E-16 98.5 17.1 175 62-247 13-209 (422)
174 TIGR00792 gph sugar (Glycoside 99.4 3.7E-12 8.1E-17 107.3 14.9 168 75-252 12-198 (437)
175 PRK11462 putative transporter; 99.4 1E-11 2.2E-16 105.1 17.5 162 51-226 220-390 (460)
176 PRK10213 nepI ribonucleoside t 99.4 2.4E-11 5.2E-16 101.0 19.4 138 104-242 248-385 (394)
177 COG2211 MelB Na+/melibiose sym 99.4 8E-12 1.7E-16 103.1 15.9 162 52-226 229-399 (467)
178 KOG4686 Predicted sugar transp 99.4 5.7E-12 1.2E-16 96.1 13.8 153 61-225 263-416 (459)
179 KOG2532 Permease of the major 99.4 2.6E-12 5.6E-17 107.7 13.1 187 48-248 247-447 (466)
180 PRK11195 lysophospholipid tran 99.4 1.2E-11 2.6E-16 102.7 17.0 142 104-247 237-379 (393)
181 KOG2533 Permease of the major 99.4 3.3E-12 7.1E-17 107.4 13.4 149 104-252 77-231 (495)
182 TIGR00711 efflux_EmrB drug res 99.4 8E-12 1.7E-16 106.6 16.0 147 68-224 261-411 (485)
183 PRK08633 2-acyl-glycerophospho 99.4 9.5E-12 2.1E-16 116.7 17.8 135 104-238 264-400 (1146)
184 PF07690 MFS_1: Major Facilita 99.4 2.6E-12 5.5E-17 104.9 12.3 132 73-214 217-352 (352)
185 PRK10473 multidrug efflux syst 99.4 1.5E-11 3.3E-16 102.1 17.0 126 104-234 235-360 (392)
186 TIGR00710 efflux_Bcr_CflA drug 99.4 1.3E-11 2.8E-16 102.1 16.6 137 75-222 219-360 (385)
187 PRK14995 methyl viologen resis 99.4 1.2E-11 2.6E-16 105.8 15.5 147 66-222 263-412 (495)
188 PF00083 Sugar_tr: Sugar (and 99.4 3.8E-15 8.2E-20 125.9 -6.5 144 108-252 46-195 (451)
189 PRK11102 bicyclomycin/multidru 99.4 3.4E-11 7.4E-16 99.4 16.8 114 104-218 226-344 (377)
190 TIGR00885 fucP L-fucose:H+ sym 99.4 5.4E-11 1.2E-15 99.3 17.7 138 75-224 245-382 (410)
191 PRK11043 putative transporter; 99.4 8.1E-11 1.7E-15 98.1 18.8 139 76-226 217-360 (401)
192 COG0738 FucP Fucose permease [ 99.4 4.2E-11 9.1E-16 95.8 15.5 175 51-241 228-402 (422)
193 PRK06814 acylglycerophosphoeth 99.4 2.2E-11 4.9E-16 114.1 16.5 154 75-238 238-412 (1140)
194 COG2807 CynX Cyanate permease 99.4 8E-11 1.7E-15 92.9 15.9 182 52-248 201-385 (395)
195 KOG0253 Synaptic vesicle trans 99.3 2.8E-11 6.1E-16 95.6 12.9 147 104-253 109-255 (528)
196 TIGR02718 sider_RhtX_FptX side 99.3 1.9E-10 4.1E-15 95.5 18.0 176 64-250 3-186 (390)
197 PF06813 Nodulin-like: Nodulin 99.3 7.6E-11 1.7E-15 90.4 13.7 151 74-238 14-171 (250)
198 TIGR01301 GPH_sucrose GPH fami 99.3 1.7E-10 3.7E-15 96.9 16.0 202 52-253 246-476 (477)
199 TIGR00889 2A0110 nucleoside tr 99.3 2.4E-10 5.2E-15 95.7 16.9 140 104-251 34-182 (418)
200 PRK09669 putative symporter Ya 99.3 1.2E-10 2.6E-15 98.4 13.9 169 73-251 20-207 (444)
201 KOG2533 Permease of the major 99.3 7E-11 1.5E-15 99.5 11.8 161 60-230 271-438 (495)
202 PRK10429 melibiose:sodium symp 99.2 4.4E-10 9.6E-15 95.7 15.9 171 71-251 15-204 (473)
203 KOG3762 Predicted transporter 99.2 1.3E-10 2.9E-15 96.0 11.3 140 106-245 404-544 (618)
204 TIGR00886 2A0108 nitrite extru 99.2 8.8E-11 1.9E-15 96.5 9.8 129 71-210 234-366 (366)
205 PRK11652 emrD multidrug resist 99.2 1.9E-09 4.1E-14 89.7 17.0 119 104-223 239-360 (394)
206 TIGR00788 fbt folate/biopterin 99.2 2.2E-09 4.8E-14 91.1 17.0 177 62-252 26-212 (468)
207 PF13347 MFS_2: MFS/sugar tran 99.1 2.2E-10 4.8E-15 96.3 9.1 168 73-250 12-200 (428)
208 TIGR00788 fbt folate/biopterin 99.1 3E-10 6.5E-15 96.3 9.2 122 104-225 284-415 (468)
209 PRK11462 putative transporter; 99.1 4.7E-09 1E-13 89.0 16.4 167 75-251 22-207 (460)
210 PRK15403 multidrug efflux syst 99.1 8.4E-09 1.8E-13 86.4 17.7 175 51-240 210-389 (413)
211 PF05631 DUF791: Protein of un 99.1 2.5E-08 5.3E-13 79.5 18.4 150 104-254 65-222 (354)
212 PF01306 LacY_symp: LacY proto 99.1 2.1E-09 4.6E-14 88.1 12.4 144 104-250 39-190 (412)
213 PF03825 Nuc_H_symport: Nucleo 99.1 1.6E-08 3.5E-13 83.8 17.8 124 80-216 20-144 (400)
214 COG2807 CynX Cyanate permease 99.1 3.4E-08 7.4E-13 78.4 17.2 158 77-247 27-185 (395)
215 KOG2816 Predicted transporter 99.0 1.2E-08 2.6E-13 85.6 14.9 136 117-255 71-206 (463)
216 KOG2325 Predicted transporter/ 99.0 4.3E-09 9.2E-14 87.5 10.9 148 104-252 67-233 (488)
217 TIGR00924 yjdL_sub1_fam amino 99.0 4.9E-08 1.1E-12 83.1 17.2 140 110-249 314-469 (475)
218 TIGR00926 2A1704 Peptide:H+ sy 99.0 2.7E-08 5.8E-13 87.0 15.1 143 104-246 19-180 (654)
219 KOG2563 Permease of the major 98.9 1.4E-08 3E-13 82.6 11.3 193 49-255 256-457 (480)
220 PRK09848 glucuronide transport 98.9 1.2E-07 2.6E-12 80.3 16.1 115 104-218 40-172 (448)
221 COG2211 MelB Na+/melibiose sym 98.8 3.1E-07 6.6E-12 76.4 15.3 171 72-252 22-211 (467)
222 PF03209 PUCC: PUCC protein; 98.8 4.2E-07 9.1E-12 73.7 15.6 121 103-223 239-363 (403)
223 PRK09584 tppB putative tripept 98.8 2.1E-07 4.5E-12 79.8 14.9 138 111-248 319-479 (500)
224 KOG2563 Permease of the major 98.8 2.1E-07 4.6E-12 75.9 13.3 119 106-224 77-203 (480)
225 PRK10207 dipeptide/tripeptide 98.7 4.2E-07 9.1E-12 77.7 14.7 138 111-248 312-476 (489)
226 KOG3764 Vesicular amine transp 98.7 3.1E-08 6.7E-13 79.4 6.1 140 108-247 306-453 (464)
227 PTZ00207 hypothetical protein; 98.7 3E-07 6.4E-12 79.4 11.2 138 113-252 396-556 (591)
228 PF03092 BT1: BT1 family; Int 98.6 2.9E-06 6.2E-11 71.4 14.8 146 104-250 21-177 (433)
229 KOG2615 Permease of the major 98.6 8.3E-07 1.8E-11 71.1 10.6 120 104-223 293-414 (451)
230 KOG3626 Organic anion transpor 98.6 7.9E-07 1.7E-11 77.4 11.4 161 50-223 383-649 (735)
231 PF11700 ATG22: Vacuole efflux 98.5 8E-06 1.7E-10 69.4 16.6 143 111-253 73-252 (477)
232 COG0477 ProP Permeases of the 98.5 1E-05 2.2E-10 64.2 16.5 125 109-233 40-170 (338)
233 PF06609 TRI12: Fungal trichot 98.5 6E-06 1.3E-10 71.3 15.7 153 62-221 310-465 (599)
234 TIGR00805 oat sodium-independe 98.5 1.4E-06 3.1E-11 76.7 12.1 160 51-223 322-581 (633)
235 PF05978 UNC-93: Ion channel r 98.5 2.9E-05 6.4E-10 55.3 15.9 110 111-221 40-149 (156)
236 TIGR00769 AAA ADP/ATP carrier 98.5 6E-05 1.3E-09 63.7 19.5 152 60-221 5-189 (472)
237 PF03137 OATP: Organic Anion T 98.4 4.8E-08 1E-12 83.9 0.0 152 62-223 305-514 (539)
238 PF12832 MFS_1_like: MFS_1 lik 98.4 5.9E-06 1.3E-10 51.4 8.7 67 71-148 9-75 (77)
239 PF06963 FPN1: Ferroportin1 (F 98.4 4.8E-05 1.1E-09 63.4 16.2 153 49-216 249-411 (432)
240 PF03209 PUCC: PUCC protein; 98.3 8.7E-06 1.9E-10 66.3 11.2 112 122-233 28-161 (403)
241 KOG4686 Predicted sugar transp 98.3 4.3E-08 9.3E-13 75.4 -3.2 120 105-224 76-199 (459)
242 PF03137 OATP: Organic Anion T 98.2 1.3E-07 2.9E-12 81.2 -1.4 147 104-250 34-252 (539)
243 KOG1330 Sugar transporter/spin 98.2 1.3E-06 2.7E-11 71.8 3.1 119 106-224 281-413 (493)
244 KOG3626 Organic anion transpor 98.2 1.9E-05 4E-10 69.1 10.2 148 104-251 128-346 (735)
245 TIGR01272 gluP glucose/galacto 98.1 3.2E-05 7E-10 62.3 9.1 86 158-243 7-108 (310)
246 PRK03612 spermidine synthase; 98.0 0.0017 3.7E-08 56.0 19.4 138 104-242 46-191 (521)
247 PF03092 BT1: BT1 family; Int 98.0 0.0001 2.2E-09 62.2 11.2 145 105-249 252-414 (433)
248 KOG2816 Predicted transporter 98.0 5.9E-05 1.3E-09 63.7 9.6 119 104-223 273-392 (463)
249 PF00854 PTR2: POT family; In 97.9 7.1E-05 1.5E-09 61.9 9.3 110 139-248 2-123 (372)
250 PF01770 Folate_carrier: Reduc 97.9 0.0019 4.1E-08 53.4 16.8 128 121-249 54-183 (412)
251 PRK15462 dipeptide/tripeptide 97.9 0.0017 3.7E-08 55.5 17.1 111 110-220 310-437 (493)
252 PF02487 CLN3: CLN3 protein; 97.9 0.00011 2.4E-09 60.4 9.7 110 109-220 282-394 (402)
253 PF06779 DUF1228: Protein of u 97.8 0.00024 5.1E-09 44.7 8.3 78 75-163 5-82 (85)
254 KOG3098 Uncharacterized conser 97.8 0.0011 2.4E-08 55.7 14.5 109 110-219 281-410 (461)
255 PF02487 CLN3: CLN3 protein; 97.6 0.007 1.5E-07 50.1 15.8 132 111-248 62-195 (402)
256 COG2270 Permeases of the major 97.6 0.0013 2.9E-08 53.9 11.3 143 109-251 59-223 (438)
257 TIGR00939 2a57 Equilibrative N 97.6 0.00074 1.6E-08 56.9 10.0 108 110-218 309-429 (437)
258 KOG0637 Sucrose transporter an 97.6 0.00013 2.8E-09 60.2 4.9 146 62-218 32-200 (498)
259 KOG1237 H+/oligopeptide sympor 97.5 0.0053 1.2E-07 53.5 14.6 180 57-246 32-243 (571)
260 PF01770 Folate_carrier: Reduc 97.4 0.0051 1.1E-07 51.0 12.4 97 111-207 288-386 (412)
261 PF03219 TLC: TLC ATP/ADP tran 97.4 0.021 4.5E-07 48.9 16.1 153 58-222 20-205 (491)
262 COG3202 ATP/ADP translocase [E 97.2 0.086 1.9E-06 44.6 17.6 154 58-223 23-210 (509)
263 KOG4332 Predicted sugar transp 97.1 0.001 2.2E-08 51.4 5.3 150 105-255 69-227 (454)
264 KOG3098 Uncharacterized conser 97.0 0.01 2.2E-07 50.0 10.6 113 106-219 48-160 (461)
265 COG3104 PTR2 Dipeptide/tripept 97.0 0.043 9.4E-07 46.4 14.0 142 109-250 325-489 (498)
266 PF01733 Nucleoside_tran: Nucl 96.9 0.00027 5.8E-09 56.9 0.3 104 113-217 187-304 (309)
267 KOG2325 Predicted transporter/ 96.8 0.0014 3.1E-08 55.2 3.9 73 171-243 398-470 (488)
268 PF06963 FPN1: Ferroportin1 (F 96.8 0.28 6E-06 41.4 19.0 136 110-245 40-197 (432)
269 TIGR00806 rfc RFC reduced fola 96.8 0.013 2.9E-07 49.5 9.2 96 115-210 305-402 (511)
270 KOG3574 Acetyl-CoA transporter 96.7 0.021 4.6E-07 46.6 9.8 143 60-216 29-188 (510)
271 PF13000 Acatn: Acetyl-coenzym 96.5 0.13 2.8E-06 43.8 13.1 56 168-223 412-467 (544)
272 PF07672 MFS_Mycoplasma: Mycop 96.5 0.029 6.3E-07 43.3 8.7 102 112-213 145-258 (267)
273 KOG3810 Micronutrient transpor 96.1 0.068 1.5E-06 43.2 9.0 130 116-248 279-421 (433)
274 KOG3762 Predicted transporter 95.8 0.004 8.7E-08 52.8 1.4 69 78-157 27-96 (618)
275 KOG1479 Nucleoside transporter 95.3 0.025 5.5E-07 46.6 4.2 104 112-216 286-398 (406)
276 KOG1479 Nucleoside transporter 95.0 1.5 3.3E-05 36.5 13.6 32 161-193 117-148 (406)
277 TIGR00769 AAA ADP/ATP carrier 94.8 2.3 5.1E-05 36.5 15.6 91 49-150 254-345 (472)
278 KOG0637 Sucrose transporter an 94.6 0.079 1.7E-06 44.4 5.3 116 112-227 336-474 (498)
279 KOG3574 Acetyl-CoA transporter 94.1 0.42 9.1E-06 39.4 8.2 58 168-225 376-433 (510)
280 KOG4332 Predicted sugar transp 94.0 0.96 2.1E-05 35.6 9.5 130 65-207 252-390 (454)
281 COG4262 Predicted spermidine s 93.8 3.2 7E-05 34.0 14.2 135 105-241 40-184 (508)
282 TIGR00939 2a57 Equilibrative N 93.3 2.4 5.3E-05 36.1 11.9 32 161-193 106-137 (437)
283 PF13000 Acatn: Acetyl-coenzym 92.4 2.3 4.9E-05 36.6 10.3 72 180-251 137-224 (544)
284 PRK10263 DNA translocase FtsK; 91.7 7.1 0.00015 37.7 13.4 23 117-139 61-83 (1355)
285 PF11947 DUF3464: Protein of u 91.3 1.8 3.9E-05 30.7 7.3 36 177-212 110-145 (153)
286 KOG3097 Predicted membrane pro 91.3 4.2 9.2E-05 33.0 10.1 71 119-190 69-139 (390)
287 KOG3880 Predicted small molecu 90.3 0.73 1.6E-05 36.9 5.1 134 111-249 65-200 (409)
288 COG5336 Uncharacterized protei 88.2 2.2 4.8E-05 28.0 5.3 27 119-145 53-80 (116)
289 PF03219 TLC: TLC ATP/ADP tran 87.1 19 0.00042 31.3 20.2 73 168-240 289-362 (491)
290 KOG2765 Predicted membrane pro 86.7 3.9 8.4E-05 33.6 7.0 19 132-150 208-226 (416)
291 KOG2601 Iron transporter [Inor 86.7 18 0.00038 30.3 15.2 39 108-146 63-101 (503)
292 KOG3810 Micronutrient transpor 84.2 2.8 6.1E-05 34.4 5.2 95 127-222 61-155 (433)
293 KOG1278 Endosomal membrane pro 84.1 12 0.00026 32.5 9.0 27 108-134 359-385 (628)
294 PF02990 EMP70: Endomembrane p 83.8 15 0.00033 32.2 10.0 26 112-137 301-326 (521)
295 KOG2881 Predicted membrane pro 83.6 0.89 1.9E-05 35.0 2.2 32 123-154 255-286 (294)
296 TIGR00880 2_A_01_02 Multidrug 81.2 14 0.0003 24.8 10.3 42 110-151 89-130 (141)
297 PF02694 UPF0060: Uncharacteri 77.4 7 0.00015 25.7 4.4 50 108-157 54-103 (107)
298 PF12805 FUSC-like: FUSC-like 76.9 23 0.00051 28.2 8.3 8 161-168 23-30 (284)
299 COG5336 Uncharacterized protei 76.4 7.7 0.00017 25.6 4.3 34 192-225 37-70 (116)
300 KOG3880 Predicted small molecu 76.1 15 0.00032 29.9 6.7 65 155-219 336-400 (409)
301 COG2274 SunT ABC-type bacterio 75.8 66 0.0014 29.6 14.2 25 111-135 160-184 (709)
302 PRK02237 hypothetical protein; 75.0 21 0.00046 23.6 7.6 49 109-157 57-105 (109)
303 cd02432 Nodulin-21_like_1 Nodu 71.7 39 0.00085 25.8 8.0 21 121-141 174-194 (218)
304 PF12832 MFS_1_like: MFS_1 lik 71.2 21 0.00046 22.0 7.6 42 194-235 32-73 (77)
305 PF04341 DUF485: Protein of un 71.2 24 0.00053 22.6 6.3 38 52-90 7-44 (91)
306 PF13536 EmrE: Multidrug resis 71.1 28 0.0006 23.2 8.0 21 133-153 84-104 (113)
307 TIGR01666 YCCS hypothetical me 69.6 55 0.0012 30.0 9.6 49 128-176 43-96 (704)
308 TIGR00267 conserved hypothetic 67.3 46 0.00099 24.2 11.4 22 120-141 125-146 (169)
309 PF11947 DUF3464: Protein of u 67.0 26 0.00057 25.0 5.7 73 51-136 52-124 (153)
310 TIGR01667 YCCS_YHJK integral m 66.6 67 0.0014 29.5 9.6 49 128-176 43-96 (701)
311 PF05884 ZYG-11_interact: Inte 65.7 69 0.0015 25.7 12.3 16 192-207 214-229 (299)
312 KOG1307 K+-dependent Ca2+/Na+ 65.6 89 0.0019 26.9 9.3 49 78-139 440-488 (588)
313 PTZ00370 STEVOR; Provisional 64.8 21 0.00046 28.2 5.3 27 226-252 257-283 (296)
314 PF06912 DUF1275: Protein of u 63.3 62 0.0013 24.3 15.3 13 119-131 57-69 (209)
315 TIGR02230 ATPase_gene1 F0F1-AT 62.7 41 0.00089 22.1 5.9 28 124-151 59-86 (100)
316 PF06123 CreD: Inner membrane 62.5 1E+02 0.0022 26.5 10.4 73 124-200 307-384 (430)
317 TIGR00926 2A1704 Peptide:H+ sy 62.4 52 0.0011 29.9 8.1 55 164-218 568-622 (654)
318 KOG1237 H+/oligopeptide sympor 61.9 40 0.00086 30.1 7.2 64 161-224 458-521 (571)
319 PF01988 VIT1: VIT family; In 61.8 68 0.0015 24.3 8.6 21 119-139 168-188 (213)
320 COG1230 CzcD Co/Zn/Cd efflux s 61.6 84 0.0018 25.3 15.5 19 135-153 84-102 (296)
321 COG1268 BioY Uncharacterized c 60.2 46 0.001 24.6 6.1 20 119-138 93-112 (184)
322 KOG1277 Endosomal membrane pro 57.3 1.3E+02 0.0028 26.0 12.2 23 116-138 335-357 (593)
323 cd02433 Nodulin-21_like_2 Nodu 56.9 90 0.002 24.2 8.3 21 121-141 189-209 (234)
324 PF09527 ATPase_gene1: Putativ 56.8 34 0.00075 19.3 5.7 32 119-150 11-43 (55)
325 COG0861 TerC Membrane protein 56.4 97 0.0021 24.4 9.1 65 159-223 14-78 (254)
326 TIGR01478 STEVOR variant surfa 55.7 46 0.001 26.4 5.7 25 226-250 261-285 (295)
327 TIGR00927 2A1904 K+-dependent 55.2 48 0.001 31.4 6.5 22 119-140 977-998 (1096)
328 COG2119 Predicted membrane pro 53.4 64 0.0014 23.9 5.8 37 118-154 144-180 (190)
329 COG3202 ATP/ADP translocase [E 52.5 1.6E+02 0.0035 25.7 19.1 78 165-242 288-367 (509)
330 PF03547 Mem_trans: Membrane t 51.5 1.4E+02 0.0031 24.8 11.2 28 191-219 90-117 (385)
331 PTZ00265 multidrug resistance 51.2 2.9E+02 0.0062 28.3 12.6 8 50-57 45-52 (1466)
332 PRK03818 putative transporter; 48.3 2E+02 0.0044 25.7 10.1 37 178-214 505-542 (552)
333 TIGR02865 spore_II_E stage II 48.0 1.9E+02 0.0041 27.0 9.4 26 165-190 187-212 (764)
334 PRK11715 inner membrane protei 47.9 1.8E+02 0.0039 25.0 11.4 72 124-201 313-391 (436)
335 PF06813 Nodulin-like: Nodulin 47.1 1.3E+02 0.0028 23.6 7.2 16 215-230 54-69 (250)
336 PF15188 CCDC-167: Coiled-coil 47.1 31 0.00066 21.8 3.0 22 57-78 63-84 (85)
337 cd02435 CCC1 CCC1. CCC1: This 46.7 1.4E+02 0.003 23.3 9.9 15 122-136 193-207 (241)
338 COG1079 Uncharacterized ABC-ty 46.2 1.6E+02 0.0035 23.9 8.6 91 122-219 21-116 (304)
339 TIGR03802 Asp_Ala_antiprt aspa 46.0 2.1E+02 0.0046 25.6 9.1 99 110-210 452-551 (562)
340 cd02434 Nodulin-21_like_3 Nodu 46.0 1.4E+02 0.0029 23.0 8.0 21 121-141 180-200 (225)
341 COG2962 RarD Predicted permeas 44.1 1.7E+02 0.0036 23.5 9.5 34 130-163 119-152 (293)
342 PF07672 MFS_Mycoplasma: Mycop 44.0 39 0.00084 26.6 3.8 55 194-248 3-62 (267)
343 PF04226 Transgly_assoc: Trans 44.0 56 0.0012 18.0 4.1 10 209-218 7-16 (48)
344 TIGR00836 amt ammonium transpo 43.1 2.1E+02 0.0045 24.4 10.7 12 125-136 239-250 (403)
345 COG1742 Uncharacterized conser 41.9 34 0.00073 22.5 2.6 47 109-155 56-102 (109)
346 PF10225 DUF2215: Uncharacteri 41.8 1.7E+02 0.0037 22.9 9.1 21 181-203 52-72 (249)
347 PF06826 Asp-Al_Ex: Predicted 41.4 1.4E+02 0.003 21.8 9.8 104 108-213 56-163 (169)
348 PF02632 BioY: BioY family; I 41.3 1.3E+02 0.0028 21.4 6.0 21 119-139 64-84 (148)
349 PRK04972 putative transporter; 40.4 2.7E+02 0.0059 24.9 9.1 42 108-151 62-103 (558)
350 COG1288 Predicted membrane pro 38.9 2.6E+02 0.0056 24.2 12.6 28 187-215 411-438 (481)
351 PF10183 ESSS: ESSS subunit of 38.6 50 0.0011 21.9 3.2 33 221-253 54-86 (105)
352 PHA03231 glycoprotein BALF4; P 37.8 59 0.0013 30.2 4.5 23 199-221 676-698 (829)
353 PF05313 Pox_P21: Poxvirus P21 37.6 1.7E+02 0.0036 21.6 9.0 22 190-211 110-131 (189)
354 KOG4830 Predicted sugar transp 36.2 76 0.0016 25.3 4.3 36 105-140 49-93 (412)
355 PF04281 Tom22: Mitochondrial 35.9 1.3E+02 0.0029 21.1 5.0 24 186-209 60-83 (137)
356 PF05297 Herpes_LMP1: Herpesvi 34.9 13 0.00028 29.3 0.0 28 225-252 162-189 (381)
357 PF04474 DUF554: Protein of un 34.5 1.9E+02 0.004 22.4 6.0 56 119-175 13-68 (226)
358 TIGR03732 lanti_perm_MutE lant 34.1 2.2E+02 0.0048 22.0 9.4 33 119-151 134-166 (241)
359 KOG3097 Predicted membrane pro 33.6 1.7E+02 0.0037 24.3 5.9 47 108-154 310-356 (390)
360 PF13829 DUF4191: Domain of un 33.4 1.4E+02 0.0031 22.9 5.2 24 113-136 56-79 (224)
361 PF12670 DUF3792: Protein of u 33.3 1.5E+02 0.0033 19.9 12.9 30 119-148 45-74 (116)
362 PF13493 DUF4118: Domain of un 32.8 76 0.0016 20.6 3.5 20 119-138 86-105 (105)
363 PF03605 DcuA_DcuB: Anaerobic 32.0 3E+02 0.0066 23.0 8.9 11 30-40 192-202 (364)
364 PRK14228 camphor resistance pr 31.9 1.7E+02 0.0037 20.0 8.3 18 174-191 70-87 (122)
365 PRK14199 camphor resistance pr 31.9 1.7E+02 0.0038 20.1 8.2 35 174-208 75-110 (128)
366 PF13940 Ldr_toxin: Toxin Ldr, 31.8 76 0.0016 16.0 2.6 19 116-134 16-34 (35)
367 PRK14232 camphor resistance pr 31.8 1.7E+02 0.0036 19.9 7.5 19 173-191 65-83 (120)
368 PRK04972 putative transporter; 31.6 3.8E+02 0.0083 24.0 9.4 35 177-211 513-547 (558)
369 PRK10692 hypothetical protein; 31.5 1.4E+02 0.003 18.9 5.0 18 137-154 3-20 (92)
370 PRK14214 camphor resistance pr 30.5 1.8E+02 0.0038 19.8 7.3 19 173-191 67-85 (118)
371 COG4920 Predicted membrane pro 30.1 2.5E+02 0.0053 21.3 5.8 45 134-178 4-48 (249)
372 PF09605 Trep_Strep: Hypotheti 29.9 1.3E+02 0.0029 22.3 4.6 28 112-139 156-183 (186)
373 PRK03818 putative transporter; 29.2 4.2E+02 0.0091 23.7 8.5 23 109-131 64-86 (552)
374 COG2966 Uncharacterized conser 28.7 2.9E+02 0.0063 21.7 8.3 23 119-142 155-177 (250)
375 PF11283 DUF3084: Protein of u 28.6 1.3E+02 0.0027 18.8 3.5 17 125-141 17-33 (79)
376 PF13491 DUF4117: Domain of un 28.3 2.3E+02 0.0049 20.3 12.3 35 208-242 122-156 (171)
377 PF08566 Pam17: Mitochondrial 28.2 2E+02 0.0043 21.1 5.0 8 50-57 25-32 (173)
378 COG3162 Predicted membrane pro 28.1 1.8E+02 0.0039 19.1 6.3 38 51-89 14-51 (102)
379 PRK14229 camphor resistance pr 27.3 1.9E+02 0.0042 19.2 6.2 19 173-191 61-79 (108)
380 PF05631 DUF791: Protein of un 26.8 3.8E+02 0.0082 22.4 18.7 106 118-223 173-304 (354)
381 KOG4782 Predicted membrane pro 26.8 93 0.002 19.9 2.8 11 49-59 46-56 (108)
382 COG2076 EmrE Membrane transpor 26.4 2E+02 0.0044 19.1 8.3 30 128-157 20-49 (106)
383 PRK10255 PTS system N-acetyl g 26.2 3E+02 0.0066 25.2 6.9 39 119-157 99-150 (648)
384 KOG2927 Membrane component of 26.1 1.1E+02 0.0023 25.3 3.7 7 189-195 209-215 (372)
385 PF11712 Vma12: Endoplasmic re 25.7 2.4E+02 0.0052 19.8 6.2 22 112-133 79-101 (142)
386 PF11023 DUF2614: Protein of u 25.4 2.2E+02 0.0047 19.2 5.8 7 134-140 7-13 (114)
387 PF07857 DUF1632: CEO family ( 25.3 3E+02 0.0065 21.7 6.0 23 192-214 74-96 (254)
388 PF10762 DUF2583: Protein of u 25.1 1.9E+02 0.004 18.3 4.5 18 137-154 3-20 (89)
389 PRK14230 camphor resistance pr 24.9 2.3E+02 0.005 19.3 7.8 17 174-190 66-82 (119)
390 TIGR02005 PTS-IIBC-alpha PTS s 24.8 3.6E+02 0.0078 23.9 6.9 39 119-157 140-191 (524)
391 KOG4473 Uncharacterized membra 24.6 2.7E+02 0.0058 21.4 5.2 34 191-224 158-191 (247)
392 COG4708 Predicted membrane pro 23.9 1.3E+02 0.0029 21.2 3.4 24 116-139 142-165 (169)
393 PF03606 DcuC: C4-dicarboxylat 23.6 4.9E+02 0.011 22.6 10.4 148 107-265 75-236 (465)
394 PF10785 NADH-u_ox-rdase: NADH 22.7 2.1E+02 0.0046 18.1 5.1 37 123-159 33-76 (86)
395 PF09605 Trep_Strep: Hypotheti 22.6 3.3E+02 0.0071 20.2 17.0 43 114-156 34-76 (186)
396 KOG0055 Multidrug/pheromone ex 22.5 7.9E+02 0.017 24.6 14.1 38 203-243 788-825 (1228)
397 cd02437 CCC1_like_1 CCC1-relat 22.5 3.2E+02 0.0068 20.0 10.7 19 121-139 131-149 (175)
398 COG1811 Uncharacterized membra 21.8 3.7E+02 0.0081 20.6 6.7 46 119-164 14-59 (228)
399 PF11298 DUF3099: Protein of u 21.6 2.1E+02 0.0045 17.6 5.2 28 132-159 11-38 (73)
400 COG2056 Predicted permease [Ge 21.4 2.8E+02 0.0062 23.2 5.2 20 228-247 192-211 (444)
401 PRK14205 camphor resistance pr 21.2 2.8E+02 0.006 18.8 7.1 19 173-191 66-84 (118)
402 PF11511 RhodobacterPufX: Intr 20.7 2.1E+02 0.0045 17.2 4.9 29 225-253 29-57 (67)
403 PF06027 DUF914: Eukaryotic pr 20.7 4.9E+02 0.011 21.5 12.5 15 233-247 291-305 (334)
404 TIGR00986 3a0801s05tom22 mitoc 20.6 1.9E+02 0.0041 20.4 3.6 23 186-208 58-80 (145)
405 PF01914 MarC: MarC family int 20.5 3.8E+02 0.0083 20.2 9.0 63 180-243 22-85 (203)
406 KOG1484 Putative Zn2+ transpor 20.1 5.1E+02 0.011 21.5 8.2 22 208-229 218-239 (354)
407 COG3105 Uncharacterized protei 20.1 2.2E+02 0.0047 19.7 3.7 21 119-139 12-32 (138)
No 1
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=1.7e-26 Score=179.67 Aligned_cols=245 Identities=38% Similarity=0.637 Sum_probs=194.0
Q ss_pred CccccCCCCCCCccccchh-hhhhccchhhccchhhhhhHHhHHhhhcccccccccccchhHHHHHHHHHHHHHHHHHHH
Q 024637 1 MAFVNQTKLPPGILVSDKA-IKENEESNLLRDTHMLSITRKITEKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYY 79 (265)
Q Consensus 1 ia~~n~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 79 (265)
||++|++..|...++.... .+++++. ... +.+....+..+.+..++++++.++.++..+..+|++.+.||
T Consensus 273 iArmNg~qlplgvl~~s~~~~~e~e~~-------~~~--~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyy 343 (528)
T KOG0253|consen 273 IARMNGKQLPLGVLESSAIDRQEQEES-------DLD--DSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYY 343 (528)
T ss_pred HHHhcCCCCCcceeeeehhhhhhhhhh-------chh--hhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHH
Confidence 6889999999887765432 1111111 111 11222334456678899999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCC------Cccccc---CCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 024637 80 GAVLLTSKLSSGDSKCG------SKVLHV---DKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACI 150 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~ 150 (265)
+..+......+....|+ +.+.+. -..+...-+.-..+..+..++|.++.+++.||+|||+.+..+++++++
T Consensus 344 g~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~i 423 (528)
T KOG0253|consen 344 GSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGI 423 (528)
T ss_pred HHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHH
Confidence 99888887776655443 222221 123334446677777899999999999999999999999999999999
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHH
Q 024637 151 FLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAV 230 (265)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~ 230 (265)
+.+++....+.....+..+...++..+.+.+.+.|.+|++|+..|+++.|.+....++|+++.|+++ +........+.
T Consensus 424 flfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i 501 (528)
T KOG0253|consen 424 FLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPI 501 (528)
T ss_pred HHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehH
Confidence 9999988777666777778888889999999999999999999999999999999999999999998 44444566788
Q ss_pred HHHHHHHHHHHHHHhcCCccccccch
Q 024637 231 ILFEVVFVLAIASSLLFPFETMGREL 256 (265)
Q Consensus 231 ~~~~~~~~i~~~~~~~~~~~~~~~~~ 256 (265)
.+++.+++++.+...+++.|||++..
T Consensus 502 ~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 502 FVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred HHHHHHHHHHHHHheeeeeccCCCCC
Confidence 89999999999999999999998764
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.90 E-value=3.2e-22 Score=174.75 Aligned_cols=144 Identities=26% Similarity=0.343 Sum_probs=122.1
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 024637 110 LYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEI 189 (265)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~ 189 (265)
.+...++..++.+++.++.|+++||+|||++++++.++.+++++++.+.++...++++.++.+++.++.++..+++++|+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677789999999999999999999999999999999988888777666667777778888888889999999999
Q ss_pred cCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCccccccc
Q 024637 190 YPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRE 255 (265)
Q Consensus 190 ~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 255 (265)
+|++.|++++|+.+..+++|++++|++++.+.+. +...++++.+++.++++++.+++ |||+++.
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~L-PET~~~~ 740 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKL-PDTRGQV 740 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhC-CCCcccc
Confidence 9999999999999999999999999999988765 45567777777777777766666 6988764
No 3
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.87 E-value=3e-21 Score=159.43 Aligned_cols=204 Identities=15% Similarity=0.209 Sum_probs=159.5
Q ss_pred cccccccccc-chhHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHH
Q 024637 48 GFSSFFMLFS-RKLIRTTLLLWVLFFANVF-SYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGL 125 (265)
Q Consensus 48 ~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (265)
...+++++++ +..++...+.+...+...+ ..+....|...++++.+ .+...+.+.....++...+.+
T Consensus 254 ~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG-----------~~~~~a~~an~~~g~v~~~~t 322 (485)
T KOG0569|consen 254 KQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAG-----------FTPEEAQYANLGIGIVNLLST 322 (485)
T ss_pred cCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHH
Confidence 5568889996 4566666666555555433 45566677777776554 777888889999999999999
Q ss_pred HHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhc----c-h-hHH---HHHHHHHHHHHHhh-hhhhhhhhcccccCCCcc
Q 024637 126 ILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH----Q-S-AVV---TTLLLFGVRMCVTG-TITVATIYAPEIYPTPAR 195 (265)
Q Consensus 126 ~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~----~-~-~~~---~~~~~~~~g~~~~~-~~~~~~~~~~e~~p~~~r 195 (265)
+++.++.||.|||++++.+..++.++.+++... . . .|. .+++.+++.++.+. ..|+.+-+.+|++|++.|
T Consensus 323 ~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R 402 (485)
T KOG0569|consen 323 LVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSAR 402 (485)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccch
Confidence 999999999999999999999998887766551 1 1 122 22333333333332 348899999999999999
Q ss_pred hhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCccccccchhhhhhhc
Q 024637 196 TTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRELKDTVDAI 263 (265)
Q Consensus 196 ~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 263 (265)
+.++++.....++..++..+.++.+.+..|. ..|+.+.+.+.+..+..++..||||+|+..|+.++.
T Consensus 403 ~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~ 469 (485)
T KOG0569|consen 403 SAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEEL 469 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHH
Confidence 9999999999999999999999999999887 788889999999999999999999999988776653
No 4
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.85 E-value=8.5e-20 Score=159.68 Aligned_cols=181 Identities=17% Similarity=0.163 Sum_probs=140.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHH
Q 024637 60 LIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 139 (265)
.|..++++.+..+........+...+|.+..+. +.+..+.+++.++..++.+++.+++|+++||+|||+
T Consensus 165 ~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~-----------gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~ 233 (742)
T TIGR01299 165 QWALFFVLGLALMADGVEVFVVGFVLPSAEKDL-----------CIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQ 233 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 344444444444444443445566677765433 366678888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHH
Q 024637 140 SMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
+++++.++.+++.++..+.++.+.+++++++.|++.++..++..++++|.+|++.|+..+++...+..+|.++++.++..
T Consensus 234 ~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~ 313 (742)
T TIGR01299 234 CLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWA 313 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888899999999999999999999999999999999999999999999999999999988877
Q ss_pred HHhhc-------------chhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 220 LVTSC-------------HLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 220 l~~~~-------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
+.... +|++.+++.++..++. ++.+++.||++
T Consensus 314 il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESP 358 (742)
T TIGR01299 314 IIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESP 358 (742)
T ss_pred HHHhccchhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCH
Confidence 76543 3555555544444444 44444556764
No 5
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.85 E-value=2.4e-20 Score=159.31 Aligned_cols=199 Identities=21% Similarity=0.291 Sum_probs=133.7
Q ss_pred cccccccc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCch------------HHHHH
Q 024637 51 SFFMLFSR----KLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNS------------LYVDV 114 (265)
Q Consensus 51 ~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 114 (265)
++++++++ ++++.++.....++...+.+|+...|.|.+.++.+ .+... .....
T Consensus 273 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G-----------~~~~~~~~~~~~~~~~~~~~~~ 341 (502)
T TIGR00887 273 SWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIG-----------YSPPAATNNAYEELYKTAVGNL 341 (502)
T ss_pred hHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHc-----------CCCCccchhHHHHHHHHHHHHH
Confidence 57777642 23344444455566666778888888888875543 22111 11123
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 024637 115 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ----SAVVTTLLLFGVRMCVTGTITVATIYAPEIY 190 (265)
Q Consensus 115 ~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~ 190 (265)
.+..++.+++.++.++++||+|||++++++.++.+++++++.... +........+...++..+..+..+.+.+|++
T Consensus 342 ~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 421 (502)
T TIGR00887 342 IIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVF 421 (502)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccC
Confidence 344456677889999999999999999888877777665554321 1111111111122222334567788899999
Q ss_pred CCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhc----------chhHHHHHHHHHHHHHHHHHhcCCccccccchhhhh
Q 024637 191 PTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSC----------HLRLAVILFEVVFVLAIASSLLFPFETMGRELKDTV 260 (265)
Q Consensus 191 p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~----------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 260 (265)
|++.|+++.|+.+.+++++++++|.+.+++.+.. +....+.+++++++++.+.. ++.|||++++++|.+
T Consensus 422 p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~~~leei~ 500 (502)
T TIGR00887 422 PTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT-LLIPETKGKSLEELS 500 (502)
T ss_pred chhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh-eEeccCCCCCHHhhh
Confidence 9999999999999999999999999999998742 33456777777777766654 455799998887654
Q ss_pred h
Q 024637 261 D 261 (265)
Q Consensus 261 ~ 261 (265)
+
T Consensus 501 ~ 501 (502)
T TIGR00887 501 G 501 (502)
T ss_pred C
Confidence 3
No 6
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.84 E-value=3.8e-19 Score=148.29 Aligned_cols=182 Identities=13% Similarity=0.046 Sum_probs=154.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHH
Q 024637 60 LIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 139 (265)
.++.+..+++.++........+....|.+.++. +.+..+.++..+...++..++.++.|++.||+|||+
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~-----------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~ 74 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDL-----------GLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARR 74 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhc-----------CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHH
Confidence 455566666666666676777777777665443 477888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHH
Q 024637 140 SMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
++..+.++..++.++..+.++.+.+++.+++.|++.+...+....++.|++|+++|++++++.+....+|..+++.+.++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~ 154 (412)
T TIGR02332 75 WIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGY 154 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888999999999999999999889888999999999999999999999999999999999998
Q ss_pred HHh------hcchhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 220 LVT------SCHLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 220 l~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
+.+ ..||++.|.+.++..++..++.+++.||++
T Consensus 155 l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 155 ILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred HHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 874 358999999888777766666666656654
No 7
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.83 E-value=6.3e-19 Score=141.76 Aligned_cols=181 Identities=13% Similarity=0.032 Sum_probs=167.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhch
Q 024637 58 RKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGR 137 (265)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr 137 (265)
+..+...+.+.++.|+....-+...-.+|.+.++. +.+....++..+++.++..+++++...++||+.|
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl-----------~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~R 77 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADL-----------GVSEGAAGQLITAYALGVALGAPLLALLTGRLER 77 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccch
Confidence 34556777777888888888888888899988555 4888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHH
Q 024637 138 KLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVA 217 (265)
Q Consensus 138 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~ 217 (265)
|++++....+..++.++..+++|++.+++.+++.++..|..+++..+...++.|+++|++++++......++.++|..++
T Consensus 78 r~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLG 157 (394)
T COG2814 78 RRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLG 157 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcchhHHHHHHHHHHHHHHHHHhcCCc
Q 024637 218 VGLVTSCHLRLAVILFEVVFVLAIASSLLFPF 249 (265)
Q Consensus 218 ~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 249 (265)
.++.+.+||+.+|+..+++.++..+..+...|
T Consensus 158 t~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 158 TFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999988888887776
No 8
>PRK03545 putative arabinose transporter; Provisional
Probab=99.83 E-value=7.8e-19 Score=145.58 Aligned_cols=177 Identities=8% Similarity=-0.005 Sum_probs=145.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHH
Q 024637 63 TTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMV 142 (265)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 142 (265)
..+.+.+..+......+.....+|.+.++. +.+..+.++..+...++..++.++.|+++||+|||+++.
T Consensus 10 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~-----------~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 78 (390)
T PRK03545 10 RVVTLALAAFIFNTTEFVPVGLLSDIAQSF-----------HMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLI 78 (390)
T ss_pred HHHHHHHHHHHHHhHHHHHHcchHHHHhHc-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHH
Confidence 344444443333333333444567776544 478889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHh
Q 024637 143 LMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVT 222 (265)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~ 222 (265)
.+.++.+++.+...+.++.+.+++.+++.|++.+...+...+++.|.+|+++|+.++|+......+|..++|.+.+.+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~ 158 (390)
T PRK03545 79 GLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ 158 (390)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 99999999999888899999999999999988888888899999999999999999999999999999999999999999
Q ss_pred hcchhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 223 SCHLRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 223 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
..||++.+.+.+++.++..+..+...|+
T Consensus 159 ~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 186 (390)
T PRK03545 159 YLGWRTTFLAIGGGALITLLLLIKLLPL 186 (390)
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999888777666555544444
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.83 E-value=1.2e-18 Score=148.35 Aligned_cols=194 Identities=19% Similarity=0.217 Sum_probs=135.1
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHH
Q 024637 51 SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAI 130 (265)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 130 (265)
++++++++ +++.+.......+.....+|++..|+|.+.++.. +.+.....+......++.+++.++.|+
T Consensus 240 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~----------g~s~~~~~~~~~~~~~~~~~~~~~~g~ 308 (490)
T PRK10642 240 SFKEIATK-HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNL----------HYSEDHGVLIIIAIMIGMLFVQPVMGL 308 (490)
T ss_pred CHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46666643 3444444444455566778888889999885433 355455566666777888899999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHH-H--hhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhh
Q 024637 131 IVDKIGRKLSMVLMFVSACIFLLP-L--VFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGK 207 (265)
Q Consensus 131 l~dr~grr~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ 207 (265)
++||+|||+++.++.++..+..+. + ....+...+++..++.+++.+...+....+++|++|++.|++++|+.+..+.
T Consensus 309 l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~ 388 (490)
T PRK10642 309 LSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISV 388 (490)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHH
Confidence 999999999888777644433222 1 2234445555666667777666677788888899999999999999888888
Q ss_pred HHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHhcCCccccccch
Q 024637 208 VGGMVCPLVAVGLVTSCH-LRLAVILFEVVFVLAIASSLLFPFETMGREL 256 (265)
Q Consensus 208 ~g~~~~~~i~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 256 (265)
+++.++|.+.+++.+..+ ++.++++..+..+++.+..+++ ||+++...
T Consensus 389 ~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~-pes~~~~~ 437 (490)
T PRK10642 389 LVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTM-KETANRPL 437 (490)
T ss_pred HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh-ccccCCCC
Confidence 888999999999987654 4555555555555555555544 68766543
No 10
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.83 E-value=1e-18 Score=144.88 Aligned_cols=181 Identities=10% Similarity=0.016 Sum_probs=149.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHH
Q 024637 60 LIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 139 (265)
.|+.+..+.++.+......|.....+|.+.++. +.+..+.++..+...++..++.++.|+++||+|||+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~ 86 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDL-----------GISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRY 86 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHH
Confidence 455555555554444445555555567776444 477788899888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHH
Q 024637 140 SMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
++..+.++.+++.+...+.++.+.+++.+++.|++.+...+....++.|.+|+++|+.+.++.....++|..++|.++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~ 166 (394)
T PRK10213 87 VVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSF 166 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcchhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 220 LVTSCHLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 220 l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
+.+..+|++.+.+.+++.++..+......||+
T Consensus 167 l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 167 LGELIGWRNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred HHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 99999999999887776665554444434453
No 11
>TIGR00898 2A0119 cation transport protein.
Probab=99.82 E-value=1.1e-18 Score=149.49 Aligned_cols=188 Identities=34% Similarity=0.593 Sum_probs=142.5
Q ss_pred cccccccc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHH
Q 024637 50 SSFFMLFS-RKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILS 128 (265)
Q Consensus 50 ~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (265)
.+++++++ ++.++.++..++.++.....+|+...+.+.+. . +......+.++..+++.++.
T Consensus 314 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~---~~~~~~~~~~~~~i~~~~~~ 375 (505)
T TIGR00898 314 YSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLG---------------G---NIYLDLFISGLVELPAKLIT 375 (505)
T ss_pred CcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccC---------------C---ChHHHHHHHHHHHHHHHHHH
Confidence 46777886 44455555556666666677777666655443 2 23455556677888999999
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHHhhcchh--HHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhh
Q 024637 129 AIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSA--VVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLG 206 (265)
Q Consensus 129 g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~ 206 (265)
+++.||+|||+.+.++.++.+++.+++.+.++. +..++..++.+++.+..++..+.+.+|.+|++.|++++|+.+..+
T Consensus 376 ~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~ 455 (505)
T TIGR00898 376 LLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMA 455 (505)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHH
Confidence 999999999999999998888888777664433 445555666677777788899999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCccccccchhh
Q 024637 207 KVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRELKD 258 (265)
Q Consensus 207 ~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 258 (265)
++|++++|++.+ + +..+...++.++++..+++.++.+++ |||+++++++
T Consensus 456 ~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~l-pet~~~~l~~ 504 (505)
T TIGR00898 456 RVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLFL-PETKGVPLPE 504 (505)
T ss_pred HHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHcC-cCCCCCCCCC
Confidence 999999999998 4 44466778888888777777766655 5998876643
No 12
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.81 E-value=2e-18 Score=145.02 Aligned_cols=175 Identities=11% Similarity=0.078 Sum_probs=145.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHH
Q 024637 65 LLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLM 144 (265)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~ 144 (265)
+..++.++......+.+..+.|.+.++. +.+..+.++..+...++..++.++.|+++||+|||+++.++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~ 94 (434)
T PRK11663 26 ITMYLGYALFYFTRKSFNAAMPEMLADL-----------GLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIG 94 (434)
T ss_pred HHHHHHHHHHHHhhhhHHHhhHHHHHhc-----------CCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHH
Confidence 3444445555555556677788887554 47778889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhc
Q 024637 145 FVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSC 224 (265)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~ 224 (265)
.++.+++.++..+.++.+.+++.+++.+++.+..++....++.|.+|+++|++++|+.+....+|+.++|.+.+++.+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 174 (434)
T PRK11663 95 LIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY 174 (434)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999888888888888888888898888888889999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 225 HLRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 225 ~~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
+|++.+.+.+++.++..+...+..+|
T Consensus 175 gw~~~f~~~~i~~~~~~~~~~~~~~~ 200 (434)
T PRK11663 175 GWRYGMMIAGIIAIVVGLFLCWRLRD 200 (434)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999988877665554443333333
No 13
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.81 E-value=3e-18 Score=146.17 Aligned_cols=180 Identities=14% Similarity=0.074 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHH
Q 024637 61 IRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLS 140 (265)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 140 (265)
+..+..+++..+...........-+|.+..+. +.+..+..+..+.+.++...+.++.|+++||+|||++
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l-----------~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~ 73 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMTL-----------GASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRL 73 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34555566666666666677777788887554 3677788999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhccccc-CCCcchhhHHHHHhhhhHHHHHHHHHHHH
Q 024637 141 MVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIY-PTPARTTGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~-p~~~r~~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
+.++.++..++.+...+.++.+.+++.+++.|++.+...+.....+.+.+ |+++|+++.|+......+|..+||.++++
T Consensus 74 l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~ 153 (495)
T PRK14995 74 LMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGI 153 (495)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888887777776665 67899999999999999999999999999
Q ss_pred HHhhcchhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 220 LVTSCHLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 220 l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
+.+..+|++.|++...+.++..++.++..|+.
T Consensus 154 l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 154 LLEHFYWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred hhccCChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999888777776666655555554
No 14
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.81 E-value=3.7e-18 Score=139.28 Aligned_cols=169 Identities=15% Similarity=0.149 Sum_probs=140.1
Q ss_pred HHHHHHHHHHHHHHHHH-HhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHH
Q 024637 70 LFFANVFSYYGAVLLTS-KLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSA 148 (265)
Q Consensus 70 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~ 148 (265)
..+.............| .+.++. +.+..+.++..+...++..++.++.|+++||+|||+++.++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~ 72 (352)
T PF07690_consen 4 AFFLSGFGFSIISPALPLYLAEEL-----------GLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLF 72 (352)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHCCS-----------TTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhh
Confidence 34444555555556666 444333 477888999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhH
Q 024637 149 CIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRL 228 (265)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~ 228 (265)
+++.+...+.++.+..++.+++.|++.+...+....++.|.+|+++|+.+.++.+....+|..++|.+.+.+.+..+|+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~ 152 (352)
T PF07690_consen 73 ALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRW 152 (352)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCC
T ss_pred hhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcccccc
Confidence 99855555556666888999999999999999999999999999999999999999999999999999999998889999
Q ss_pred HHHHHHHHHHHHHHHHhcCCc
Q 024637 229 AVILFEVVFVLAIASSLLFPF 249 (265)
Q Consensus 229 ~~~~~~~~~~i~~~~~~~~~~ 249 (265)
.+++.+++.++..++..++.+
T Consensus 153 ~~~~~~~~~~~~~il~~~~~~ 173 (352)
T PF07690_consen 153 AFLISAILSLIAAILFILFLP 173 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCCC-
T ss_pred ccccccchhhhhhhhHhhhhh
Confidence 999998888887775444443
No 15
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.81 E-value=5.4e-18 Score=140.98 Aligned_cols=182 Identities=16% Similarity=0.156 Sum_probs=150.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhch
Q 024637 58 RKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGR 137 (265)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr 137 (265)
+..++.+...++.++......+......|.+.++. +.+..+.++..++..++..++.++.|+++||+||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~ 76 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEF-----------GLTTVDAASLISAALISRWFGALMFGLWGDRYGR 76 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44566666777777777777777777788776444 4777888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHH
Q 024637 138 KLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVA 217 (265)
Q Consensus 138 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~ 217 (265)
|+++.++.++.+++.+...+.++.+.+++.+++.|++.+...+...+++.|.+|+++|+.+.++.+....+|.++++.+.
T Consensus 77 r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 156 (405)
T TIGR00891 77 RLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVY 156 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcc--hhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 218 VGLVTSCH--LRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 218 ~~l~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
+.+.+..+ |+..+.+.++..++..+ .....||+
T Consensus 157 ~~l~~~~~~~w~~~f~~~~~~~~~~~~-~~~~~~~~ 191 (405)
T TIGR00891 157 SLVVPVWGDGWRALFFISILPIIFALW-LRKNIPEA 191 (405)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHH-HHHhCCCC
Confidence 99888766 87777665444444333 33333454
No 16
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.81 E-value=2.2e-18 Score=142.44 Aligned_cols=171 Identities=12% Similarity=0.126 Sum_probs=143.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q 024637 72 FANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIF 151 (265)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~ 151 (265)
+.............|.+.++. +.+..+.++..+...++..++.++.|+++||+|||+++..+.++.+++
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~~-----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 83 (385)
T TIGR00710 15 ILGPLGIDMYLPAFPEIAADL-----------STPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALS 83 (385)
T ss_pred HHHHHHHHHhcccHHHHHHHh-----------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH
Confidence 333344444444556665443 477788899999999999999999999999999999999999999999
Q ss_pred HHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHH
Q 024637 152 LLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVI 231 (265)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 231 (265)
.+...+.++.+..++.+++.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+++.+..+|+..+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 163 (385)
T TIGR00710 84 SLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFA 163 (385)
T ss_pred HHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 88888888888888899999999999889999999999999999999999999999999999999999999899999888
Q ss_pred HHHHHHHHHHHHHhcCCccccc
Q 024637 232 LFEVVFVLAIASSLLFPFETMG 253 (265)
Q Consensus 232 ~~~~~~~i~~~~~~~~~~~~~~ 253 (265)
+.+++.++..+..++..||+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 164 FLSLAGILLSALIFFILPETLP 185 (385)
T ss_pred HHHHHHHHHHHHHHHhCCCCCC
Confidence 8887777666666655555543
No 17
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.81 E-value=4.5e-18 Score=144.32 Aligned_cols=180 Identities=14% Similarity=0.181 Sum_probs=140.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhc
Q 024637 57 SRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIG 136 (265)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 136 (265)
++++++.+...+...+......+....+.|.+.++. +.+..+.++..+...++..++.++.|+++||+|
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G 99 (476)
T PLN00028 31 ARPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNL-----------NLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYG 99 (476)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 345566666666666666666677777778777544 367778888888888889999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHH
Q 024637 137 RKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLV 216 (265)
Q Consensus 137 rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i 216 (265)
||+++.++.++.+++.++..+.++.+.+++.+++.|++.+.. .....+++|.+|+++|+.++|+.+...++|+.+++.+
T Consensus 100 ~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~ 178 (476)
T PLN00028 100 PRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLL 178 (476)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888888888888888888888888888877654 3455678899999999999999998888888888777
Q ss_pred HHHHHh---------hcchhHHHHHHHHHHHHHHHHHhcCC
Q 024637 217 AVGLVT---------SCHLRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 217 ~~~l~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
.+.+.. ..||++.|.+.+++.++..+..+++.
T Consensus 179 ~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 179 MPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 665532 14799999988888776666655554
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.81 E-value=2.7e-18 Score=143.09 Aligned_cols=181 Identities=15% Similarity=0.103 Sum_probs=150.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHH
Q 024637 60 LIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 139 (265)
.+..+.+.+...+......+......|.+.++. +.+..+.++..+...++..++.++.|+++||+|||+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 81 (406)
T PRK11551 13 LALTIGLCFLVALLEGLDLQSAGVAAPRMAQEF-----------GLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKR 81 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch
Confidence 444555566666666666677777778777544 477788899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHH
Q 024637 140 SMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
++..+.++..++.+...+.++.+.+++.+++.|++.+...+...+++.|.+|+++|++++++.+....+|..+++.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 161 (406)
T PRK11551 82 ILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVL 161 (406)
T ss_pred hHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888888887888888899999999999999889999999999999999999999999999999999999988
Q ss_pred HHhhcchhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 220 LVTSCHLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 220 l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
+.+..+|+..+.+.+++.++..++..+..||+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 193 (406)
T PRK11551 162 AAGDAAWRHIFYVGGVGPLLLVPLLMRWLPES 193 (406)
T ss_pred HccccCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 88888898888877766555555444444454
No 19
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.80 E-value=3.5e-19 Score=141.99 Aligned_cols=184 Identities=14% Similarity=0.084 Sum_probs=162.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhch
Q 024637 58 RKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGR 137 (265)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr 137 (265)
+.+++.++..++.+....+..-.+..-.|.+.++. +.+..+.+.+.+...+...++-++.|.++||.+.
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~-----------~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~np 93 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDG-----------GLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNP 93 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhc-----------CCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCC
Confidence 33445555566667677777777788888887554 3888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHH
Q 024637 138 KLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVA 217 (265)
Q Consensus 138 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~ 217 (265)
|..+.++++++++..+++.+.++.+.+.++.++.|++.|..+|++...+..++|+++||+..++-+...|+|+.+.|.+.
T Consensus 94 r~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~ 173 (448)
T COG2271 94 RYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVA 173 (448)
T ss_pred ceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred --HHHHhhcchhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 218 --VGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 218 --~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
+++..+.+|+..|++-+++.++.+++.++..++++
T Consensus 174 ~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~P 210 (448)
T COG2271 174 LLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRP 210 (448)
T ss_pred HHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 89988889999999999999888888777765443
No 20
>PRK10054 putative transporter; Provisional
Probab=99.80 E-value=3.5e-18 Score=141.72 Aligned_cols=174 Identities=13% Similarity=0.091 Sum_probs=140.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHH
Q 024637 63 TTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMV 142 (265)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 142 (265)
.++.+....++....++....++|.+.++.. +.+..++++..++..++..++.++.|+++||+|||+++.
T Consensus 8 ~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~----------g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~ 77 (395)
T PRK10054 8 STSALLASSLLLTIGRGATLPFMTIYLSRQY----------SLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYML 77 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHH
Confidence 3444555566666667777777777764432 578889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHh
Q 024637 143 LMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVT 222 (265)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~ 222 (265)
++.++.+++.+.+.+.++.+..++.+++.+.+.+...+....+..|.+|++.|+++.|+.+...++|.+++|.+.+++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~ 157 (395)
T PRK10054 78 LAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM 157 (395)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888888777777877776666666766666677888999999999999999999999999999999999998875
Q ss_pred hcchhHHHHHHHHHHHHHHHHHhcC
Q 024637 223 SCHLRLAVILFEVVFVLAIASSLLF 247 (265)
Q Consensus 223 ~~~~~~~~~~~~~~~~i~~~~~~~~ 247 (265)
.+|+..+...+++.++..++..+.
T Consensus 158 -~g~~~~f~~~~~~~~i~~i~~~~~ 181 (395)
T PRK10054 158 -QSINLPFWLAAICSAFPLVFIQIW 181 (395)
T ss_pred -hccCcHHHHHHHHHHHHHHHHHHH
Confidence 688888887777766665554443
No 21
>PRK10504 putative transporter; Provisional
Probab=99.80 E-value=5.6e-18 Score=143.87 Aligned_cols=180 Identities=12% Similarity=0.038 Sum_probs=151.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHH
Q 024637 60 LIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 139 (265)
.++.++.+++..+......+.+..+.|.+.++. +.+..+.++..+...++..++.++.|+++||+|||+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~ 76 (471)
T PRK10504 8 VRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSL-----------GESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRN 76 (471)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh-----------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 345566666677777777777888899888654 477777788888888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHH
Q 024637 140 SMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
++..+.++.+++.+...+.++.+.+++.+++.|++.+...+....++.|.+|++.|+++.|+.....++|..++|.+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~ 156 (471)
T PRK10504 77 IFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGL 156 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 99999888888887777778888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcchhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 220 LVTSCHLRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 220 l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
+.+..+|++.|.+......+..+......|+
T Consensus 157 l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 157 LVEYASWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999888777666666555555444
No 22
>TIGR00895 2A0115 benzoate transport.
Probab=99.80 E-value=3e-18 Score=142.10 Aligned_cols=181 Identities=15% Similarity=0.140 Sum_probs=148.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHH
Q 024637 60 LIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 139 (265)
.++.....++.++...........+.|.+.++. +.+..+.++......++..++.++.|+++||+|||+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 83 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAEW-----------GLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKR 83 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhcc-----------CCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHH
Confidence 344444455555555555566667778777444 467778888888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHH
Q 024637 140 SMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
.+.++.++.+++.++..+.++.+.+++.+++.|++.+...+...+++.|.+|++.|+++.++......+|..++|.+.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 163 (398)
T TIGR00895 84 VLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGW 163 (398)
T ss_pred HHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHH
Confidence 99999999988888888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcchhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 220 LVTSCHLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 220 l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
+.+..+|+..+.+.+++..+..++.++..||+
T Consensus 164 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 164 LIPVFGWRSLFYVGGIAPLLLLLLLMRFLPES 195 (398)
T ss_pred HhhcccceeehhhhhhHHHHHHHHHHHhCCCC
Confidence 99988998888877666655555555444454
No 23
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.79 E-value=3.2e-18 Score=145.79 Aligned_cols=176 Identities=10% Similarity=0.059 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHH
Q 024637 65 LLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLM 144 (265)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~ 144 (265)
..+++..+.............|.+.++. +.+..+.++..+...++..++.++.|+++||+|||+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 73 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGDL-----------GSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLIS 73 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHH
Confidence 3344445555555555666778777554 36777888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhc
Q 024637 145 FVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSC 224 (265)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~ 224 (265)
.++..++.+.....++.+.+++.+++.|++.+...+...+++.|.+|++.|+.+.++......+|..++|.+.+++.+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 153 (485)
T TIGR00711 74 TFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY 153 (485)
T ss_pred HHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc
Confidence 99999999988888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 225 HLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 225 ~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
+|++.+++.+.+.++..++.++..|++
T Consensus 154 ~w~~~f~~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 154 HWRWIFLINVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred CceehhhhhhHHHHHHHHHHHHHcCCc
Confidence 999998887777766666555555443
No 24
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.79 E-value=1.1e-17 Score=142.91 Aligned_cols=174 Identities=17% Similarity=0.175 Sum_probs=147.7
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHH
Q 024637 51 SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAI 130 (265)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 130 (265)
++.+.+++.+++.+...++.++...+..+......|.+.++. +.+..+.++..+...++..++.++.|+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----------~~s~~~~~~~~~~~~~~~~~~~~~~g~ 77 (496)
T PRK03893 9 PWYRHLNRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEF-----------GLTTVQAASLISAAFISRWFGGLLLGA 77 (496)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555666666777777777777777777778776443 477778888888899999999999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHH
Q 024637 131 IVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGG 210 (265)
Q Consensus 131 l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~ 210 (265)
++||+|||+++.++.++.+++.+.+.+.++.+.+++.+++.|++.+..++....++.|.+|++.|+.+.++.....++|.
T Consensus 78 l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 157 (496)
T PRK03893 78 MGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGA 157 (496)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988888888888899999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHH
Q 024637 211 MVCPLVAVGLVTSCHLRLAVILFEV 235 (265)
Q Consensus 211 ~~~~~i~~~l~~~~~~~~~~~~~~~ 235 (265)
.++|.+.+.+.+..+|++.+.+...
T Consensus 158 ~~~~~~~~~l~~~~~w~~~f~~~~~ 182 (496)
T PRK03893 158 VVAAQVYSLVVPVWGWRALFFIGIL 182 (496)
T ss_pred HHHHHHHHHHhccCCHHHHHHHHHH
Confidence 9999999999999999888766433
No 25
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.79 E-value=9.9e-18 Score=141.93 Aligned_cols=176 Identities=15% Similarity=0.085 Sum_probs=147.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhh-hchHHH
Q 024637 62 RTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDK-IGRKLS 140 (265)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~ 140 (265)
+.++.++...+...+.+|++..++|.|..+.+ ..+.+..+.+.......++..++.+++|+++|| +|||++
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~--------~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~ 81 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQA--------GLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKT 81 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHH
Confidence 44555666677778899999999999985430 125777888999999999999999999999999 899999
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc---chhhHHHHHhhhhHHHHHHHHHH
Q 024637 141 MVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPA---RTTGFGVASSLGKVGGMVCPLVA 217 (265)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~---r~~~~g~~~~~~~~g~~~~~~i~ 217 (265)
+.++.++.+++.+++.+.++.+.+++.+.+.+++.+...+...+++++.+|++. |++++++.+...++|++++|.+.
T Consensus 82 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~ 161 (475)
T TIGR00924 82 MVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLA 161 (475)
T ss_pred HHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHH
Confidence 999999999999888887777777777888888888888999999999998754 89999999999999999999999
Q ss_pred HHHHhhcchhHHHHHHHHHHHHHHHHHh
Q 024637 218 VGLVTSCHLRLAVILFEVVFVLAIASSL 245 (265)
Q Consensus 218 ~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 245 (265)
+++.+..+|+..|...++..+++.+...
T Consensus 162 g~l~~~~g~~~~f~~~~~~~~~~~l~~~ 189 (475)
T TIGR00924 162 GVIAENYGYHVGFNLAAVGMVIGLLTFF 189 (475)
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 9999988999888887765555444433
No 26
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.79 E-value=1.3e-17 Score=139.83 Aligned_cols=164 Identities=17% Similarity=0.145 Sum_probs=140.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHH
Q 024637 60 LIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 139 (265)
+++..+..++.++...+..+......|.+.++. +.+..+.++..++..++..++.++.|+++||+|||+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----------~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~ 84 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLIFYIMYLIKADL-----------GLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKP 84 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH
Confidence 344455556666666666666666677666443 467778888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHH
Q 024637 140 SMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
++.++.++.+++.+...+.++.+.+++.+++.|++.+..++....++.|.+|+++|+++.++......+|.++++.+.+.
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~ 164 (426)
T PRK12307 85 LMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPS 164 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHH
Confidence 99999999999998888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcchhHHHHHHH
Q 024637 220 LVTSCHLRLAVILFE 234 (265)
Q Consensus 220 l~~~~~~~~~~~~~~ 234 (265)
+.+..+|+..+++..
T Consensus 165 l~~~~~w~~~f~i~~ 179 (426)
T PRK12307 165 FAEAYGWRAAFFVGL 179 (426)
T ss_pred HcccCCHHHHHHHHH
Confidence 988889988887644
No 27
>PRK03699 putative transporter; Provisional
Probab=99.79 E-value=2.6e-17 Score=136.60 Aligned_cols=176 Identities=15% Similarity=0.192 Sum_probs=146.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchH
Q 024637 59 KLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRK 138 (265)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr 138 (265)
++++.++..++.++......+.+...+|.+.++. +.+..+.++..+...++..++.++.|++.||+|||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~-----------~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r 72 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYF-----------NLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLK 72 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 4456666666666666666677777788877544 47778888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHH
Q 024637 139 LSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAV 218 (265)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~ 218 (265)
+++..+.++.+++.++..+.++.+.+++.+++.|++.+...+....++.|.+|++.|+.+.+..+....+|+.++|.+.+
T Consensus 73 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 152 (394)
T PRK03699 73 RQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAA 152 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888888888888889999999988888888999999999999999999998888899999999998
Q ss_pred HHHh-hcchhHHHHHHHHHHHHHHHHHh
Q 024637 219 GLVT-SCHLRLAVILFEVVFVLAIASSL 245 (265)
Q Consensus 219 ~l~~-~~~~~~~~~~~~~~~~i~~~~~~ 245 (265)
++.+ ..+|++.+...+++.++..++.+
T Consensus 153 ~l~~~~~gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 153 YLLARSIEWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred HHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 8765 46899998887777665554443
No 28
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.79 E-value=1e-17 Score=138.54 Aligned_cols=178 Identities=13% Similarity=0.044 Sum_probs=148.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHH
Q 024637 64 TLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVL 143 (265)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~ 143 (265)
.+...+..+......+.....+|.+.++. +.+..+.++..+...++..++.++.|+++||+|||+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 73 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDV-----------GISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLF 73 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHc-----------CCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHH
Confidence 34444455555555556666777776444 4777788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhh
Q 024637 144 MFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTS 223 (265)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~ 223 (265)
+.++.+++.++..+.++.+.+++.+++.|++.+...+....++.|++|+++|+.++++......+|..++|.+.+++.+.
T Consensus 74 ~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 153 (382)
T PRK10091 74 LVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQE 153 (382)
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhh
Confidence 99999999998888999999999999999998888888888899999999999999999988899999999999999998
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 224 CHLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 224 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
.+|++.+.+.+++.++..+..++..||.+
T Consensus 154 ~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 154 FSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 89999998888777666555555455543
No 29
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.79 E-value=1.7e-17 Score=138.22 Aligned_cols=170 Identities=24% Similarity=0.333 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHH
Q 024637 68 WVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVS 147 (265)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~ 147 (265)
+...+......+....|.|.+.++. +.+....+.......++.+++.++.|++.||+|||+.+.++.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~p~~~~~~-----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 294 (406)
T PRK11551 226 WISYFFTLIVLYFLLNWLPSLLVGQ-----------GLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAG 294 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-----------CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3334444455666677888887553 46667778888888899999999999999999999998887777
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchh
Q 024637 148 ACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLR 227 (265)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~ 227 (265)
.+++.+.+...++.+...+..++.+++.++..+...++..|.+|++.|+++.|+.+...++|+.++|.+.|++.+..+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~ 374 (406)
T PRK11551 295 ILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRST 374 (406)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCch
Confidence 77766666666666666666777777777778888999999999999999999999999999999999999999876544
Q ss_pred HHHH-HHHHHHHHHHHHHhcCC
Q 024637 228 LAVI-LFEVVFVLAIASSLLFP 248 (265)
Q Consensus 228 ~~~~-~~~~~~~i~~~~~~~~~ 248 (265)
..++ ......+++.++.++..
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 375 VGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4333 33333344444444443
No 30
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.78 E-value=4e-18 Score=141.00 Aligned_cols=164 Identities=13% Similarity=0.083 Sum_probs=140.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHh
Q 024637 77 SYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV 156 (265)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 156 (265)
..+.+....|.+.++. +.+..+.++..++..++..++.++.|+++||+|||+++.++.++.+++.+...
T Consensus 9 ~~~~~~~~~~~~~~~~-----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~ 77 (399)
T TIGR00893 9 DRANLSFAAPMLQEDL-----------GLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQA 77 (399)
T ss_pred HHHhhhHhHHHHHHhh-----------CCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHH
Confidence 3344445556555333 47778889999999999999999999999999999999999999999888888
Q ss_pred hcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 024637 157 FHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVV 236 (265)
Q Consensus 157 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~ 236 (265)
+.++.+.+++.+++.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+|++.+...+++
T Consensus 78 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 157 (399)
T TIGR00893 78 FAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVL 157 (399)
T ss_pred HHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999888877
Q ss_pred HHHHHHHHhcCCccc
Q 024637 237 FVLAIASSLLFPFET 251 (265)
Q Consensus 237 ~~i~~~~~~~~~~~~ 251 (265)
.++..+..++..+|+
T Consensus 158 ~~~~~~~~~~~~~~~ 172 (399)
T TIGR00893 158 GIIWGVLWLKFIPDP 172 (399)
T ss_pred HHHHHHHhhheecCC
Confidence 776666665555444
No 31
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.78 E-value=1.6e-17 Score=138.57 Aligned_cols=149 Identities=16% Similarity=0.137 Sum_probs=131.3
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
+.+.....+..+++.++..++.++.|+++||+|||+++..+.++.+++.+.....++.+.+++.+++.|++.+...+..+
T Consensus 47 ~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~ 126 (413)
T PRK15403 47 NADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGY 126 (413)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777888888999999999999999999999999999999999999998888889999999999999998877667778
Q ss_pred hhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 184 IYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 184 ~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
.++.|.+|+++|++++++......+|..++|.+++.+.+..||++.|++.++..++..+..++..||++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 127 VTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 889999999999999999999999999999999999998889999998888877777665555556654
No 32
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.78 E-value=1.8e-17 Score=139.00 Aligned_cols=176 Identities=19% Similarity=0.172 Sum_probs=138.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhh-chH
Q 024637 60 LIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKI-GRK 138 (265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr 138 (265)
+.+.++.++...+...+.+|++..++|.|+.+.. +.+..+.+.....+.....++.+++|+++||+ |||
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~l----------gls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr 76 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQL----------KYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR 76 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH
Confidence 4566677777777888899999999999985543 57778888888888888899999999999999 999
Q ss_pred HHHHHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC--cchhhHHHHHhhhhHHHHHHHH
Q 024637 139 LSMVLMFVSACIFLLPLVFHQ-SAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTP--ARTTGFGVASSLGKVGGMVCPL 215 (265)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~--~r~~~~g~~~~~~~~g~~~~~~ 215 (265)
+++.++.++..++.+++.... +....++...+..++.+...+...++++|.+|++ .|.+++++.+...++|+.++|.
T Consensus 77 r~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~ 156 (493)
T PRK15462 77 MAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPI 156 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHH
Confidence 999999999988877665432 2222333334444566666677788999999986 7999999999999999999999
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHHh
Q 024637 216 VAVGLVTSCHLRLAVILFEVVFVLAIASSL 245 (265)
Q Consensus 216 i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 245 (265)
+.+++.+..||+..|...++..+++.+..+
T Consensus 157 l~g~L~~~~Gw~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 157 ACGYAQEEYSWAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HHHHHHhhhChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988876655554444433
No 33
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.78 E-value=1e-17 Score=137.36 Aligned_cols=167 Identities=12% Similarity=-0.064 Sum_probs=133.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q 024637 74 NVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLL 153 (265)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~ 153 (265)
+...+..+...+|.+.++. +.+..+.++..+.+.++..++.+..|+++||+|||+++..+......+.+
T Consensus 3 ~~~~~~~~~~~lp~i~~~~-----------~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~ 71 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDI-----------DVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG 71 (368)
T ss_pred hhHHHHHHHhhHHHHHHHh-----------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 3445556666777777544 47778889999999999999999999999999999887655555444433
Q ss_pred HHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHH
Q 024637 154 PLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILF 233 (265)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 233 (265)
.....++.+.+++.+++.|++.+. ........+|.+|+++|++++++.+....+|..+++.+.+++.+..||+..|++.
T Consensus 72 ~~~~~~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~ 150 (368)
T TIGR00903 72 RLLDPFNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPI 150 (368)
T ss_pred HHHHhccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHH
Confidence 233336788899999999999875 4555666689999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHhcCCcccc
Q 024637 234 EVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 234 ~~~~~i~~~~~~~~~~~~~ 252 (265)
+++.++..++.++..||++
T Consensus 151 ~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 151 AAVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHHHHcCCCC
Confidence 8887777666666666654
No 34
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.78 E-value=3.3e-18 Score=136.48 Aligned_cols=178 Identities=20% Similarity=0.175 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhh--chH
Q 024637 61 IRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKI--GRK 138 (265)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--grr 138 (265)
.+.++.+++.++......|++..|.|.|+.+.. +.+..++.+..+.+=+++++|++++||++||+ |||
T Consensus 251 Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k----------~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR 320 (448)
T COG2271 251 NKLIWLLALANVFVYVVRYGINDWGPLYLSEVK----------GFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRR 320 (448)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhc----------CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccc
Confidence 366777888888889999999999999997766 68888899999999999999999999999996 777
Q ss_pred HHHHHHHHHHHHHH-HHHhhcc--hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhH-HHHHHH
Q 024637 139 LSMVLMFVSACIFL-LPLVFHQ--SAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKV-GGMVCP 214 (265)
Q Consensus 139 ~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~-g~~~~~ 214 (265)
....+.+.+....+ +.....+ +.+...++.++.|+...+.+-+.-....|..|++.-|++.|+...++.+ |...+.
T Consensus 321 ~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~ 400 (448)
T COG2271 321 GPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAG 400 (448)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcC
Confidence 76655544444444 4444444 4577778888889888888888888899999999999999999999997 999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCC
Q 024637 215 LVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 215 ~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
...|++.|.+||...|.++.+.++++.++.....
T Consensus 401 ~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 401 LPLGYIADTWGWDGGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred CcceeeEecCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888888777776665554
No 35
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.78 E-value=2.3e-17 Score=137.52 Aligned_cols=149 Identities=17% Similarity=0.093 Sum_probs=129.7
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
+.+..+.++..+...++..++.++.|+++||+|||+++.++.++.+++.+...+.++.+.+++.+++.|++.+...+...
T Consensus 44 ~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~ 123 (406)
T PRK15402 44 NAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGY 123 (406)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHH
Confidence 46777888888899999999999999999999999999999999998888888888888888889999988888778888
Q ss_pred hhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 184 IYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 184 ~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
..+.|.+|++.|+.+.++......++..++|.+.+.+.+..+|++.+++.+++.++..+..++..||++
T Consensus 124 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 124 AAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred HHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999988888999999999999999889999998888777766665555555654
No 36
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.78 E-value=1.5e-17 Score=136.39 Aligned_cols=144 Identities=12% Similarity=0.078 Sum_probs=125.5
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcc-----hhHHHHHHHHHHHHHHhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ-----SAVVTTLLLFGVRMCVTGT 178 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~ 178 (265)
+.+..+.++..++..++..++.++.|+++||+|||+++.++.++..++.+...+.. +.+.+++.+++.|++.+..
T Consensus 30 ~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 109 (365)
T TIGR00900 30 TGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFF 109 (365)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHH
Confidence 36667889999999999999999999999999999999999888887777666654 7888888999999999999
Q ss_pred hhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcC
Q 024637 179 ITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 247 (265)
Q Consensus 179 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 247 (265)
.+...++++|++|+++|+++.++.+....+|.+++|.+.+++.+..+|+..+.+.++..++..+..+..
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 110 TPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999988887776666555444433
No 37
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.78 E-value=1.7e-17 Score=140.65 Aligned_cols=175 Identities=11% Similarity=0.085 Sum_probs=142.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhh-hch
Q 024637 59 KLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDK-IGR 137 (265)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~gr 137 (265)
++++.++.+++..+...+.+|++..+++.|.++.. +.+..+..+....+.....+..+++|+++|| +||
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~l----------g~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~ 80 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQL----------GFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGT 80 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccch
Confidence 35667777777888888999999988888875433 5666777777777777777788899999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhH-HHHHHHHHHHHHHhhhhhhhhhhcccccCCC--cchhhHHHHHhhhhHHHHHHH
Q 024637 138 KLSMVLMFVSACIFLLPLVFHQSAV-VTTLLLFGVRMCVTGTITVATIYAPEIYPTP--ARTTGFGVASSLGKVGGMVCP 214 (265)
Q Consensus 138 r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~--~r~~~~g~~~~~~~~g~~~~~ 214 (265)
|+++.++.++..++.+.+.+..+.. .+++.+++.+++.+...+...+++.|.+|++ +|+.++++.+...++|..++|
T Consensus 81 r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~ 160 (489)
T PRK10207 81 KRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISL 160 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHH
Confidence 9999999999999998888765433 3446777888888888899999999999987 457899999999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 024637 215 LVAVGLVTSCHLRLAVILFEVVFVLAIAS 243 (265)
Q Consensus 215 ~i~~~l~~~~~~~~~~~~~~~~~~i~~~~ 243 (265)
.++|++.+..||++.|++.++..+++.+.
T Consensus 161 ~l~g~l~~~~gw~~~F~i~~i~~~~~~~~ 189 (489)
T PRK10207 161 SLAPVIADKFGYSVTYNLCGAGLIIALLV 189 (489)
T ss_pred HHHHHHHHhhChHHHHHHHHHHHHHHHHH
Confidence 99999999999998888765544433333
No 38
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.78 E-value=1.3e-17 Score=139.50 Aligned_cols=175 Identities=10% Similarity=-0.053 Sum_probs=141.7
Q ss_pred HHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhc
Q 024637 79 YGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH 158 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~ 158 (265)
.+...+.|.+.++.. +.+....++......++.+++.++.+++.||.++++.+..+.++.+++.+.+.+.
T Consensus 240 ~~~~~~~p~~~~~~~----------g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 309 (417)
T PRK10489 240 SAVRVLYPALADEVW----------QMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM 309 (417)
T ss_pred HhHHHhhHHHHHhcc----------CCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc
Confidence 345566787775533 4666777888888889999999999999999888888888887777777776667
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 024637 159 QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFV 238 (265)
Q Consensus 159 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 238 (265)
++.+...+..++.|++.+...+...+++.|..|++.||++.|+.+...++|..++|.+.|++.+..|....+...+++..
T Consensus 310 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~ 389 (417)
T PRK10489 310 PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLL 389 (417)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHH
Confidence 77666667777778877777777888999999999999999999999999999999999999999998888888877777
Q ss_pred HHHHHHhcCCccccccchhhhhhhc
Q 024637 239 LAIASSLLFPFETMGRELKDTVDAI 263 (265)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~ 263 (265)
+..++.+...+++++++.+|.++|.
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (417)
T PRK10489 390 IIGVLLLLVLGELRRFRQTPPEVDA 414 (417)
T ss_pred HHHHHHHHhcccccccccccccCCC
Confidence 6666666666788888777776654
No 39
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.78 E-value=3.6e-17 Score=135.84 Aligned_cols=183 Identities=12% Similarity=0.029 Sum_probs=145.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchH
Q 024637 59 KLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRK 138 (265)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr 138 (265)
+.++..++.....+...+..+.....+|.+.++. +.+..+.++..+...++..++.++.|+++||+|||
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~-----------~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr 73 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDL-----------NVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR 73 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHh-----------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh
Confidence 3444455555555544455444555566666443 47778889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHH
Q 024637 139 LSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAV 218 (265)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~ 218 (265)
+++.++.++..++.+...+.++.+.+++.+++.|++.+...+....+..|.++.+.|+.+.++.+....++..++|.+.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~ 153 (394)
T PRK11652 74 PVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGG 153 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888888888899999998888777778888899999999999999998888899999999999
Q ss_pred HHHhhcchhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 219 GLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 219 ~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
.+.+..+|+..+.+.++..++..+...+..||++
T Consensus 154 ~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 154 LLTTLFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HHHhccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 9998889998888877766655554444445543
No 40
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.77 E-value=6.8e-18 Score=143.18 Aligned_cols=182 Identities=16% Similarity=0.234 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHH
Q 024637 64 TLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVL 143 (265)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~ 143 (265)
++..++..+......+....+.|.+.++. +.+....++......++.+++.++.|+++||+|||+.+.+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 354 (481)
T TIGR00879 286 FLGVVLQWFQQFTGINAIMYYSPTIFENA-----------GVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLI 354 (481)
T ss_pred HHHHHHHHHHHHhCCeehHHHHHHHHHHc-----------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 33333434444444445566677776444 3555666777888888899999999999999999999998
Q ss_pred HHHHHHHHHHHHhh-----cch-----hHHHHHHHHHHHHHHh-hhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHH
Q 024637 144 MFVSACIFLLPLVF-----HQS-----AVVTTLLLFGVRMCVT-GTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMV 212 (265)
Q Consensus 144 ~~~~~~~~~~~~~~-----~~~-----~~~~~~~~~~~g~~~~-~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~ 212 (265)
+.++.+++.+.+.+ ..+ .+..+....+.+.+.+ +..+....++.|.+|++.|+++.|+.+...++|+++
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i 434 (481)
T TIGR00879 355 GAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFI 434 (481)
T ss_pred HHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHH
Confidence 88877777666552 111 2222222223333333 233666778899999999999999999999999999
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCccccccch
Q 024637 213 CPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGREL 256 (265)
Q Consensus 213 ~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 256 (265)
+|.+.+++.+..++...+.+.++++++++++.+++.||+++++.
T Consensus 435 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 478 (481)
T TIGR00879 435 VGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTL 478 (481)
T ss_pred HHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCCh
Confidence 99999999998899888888888888888887777778776654
No 41
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.77 E-value=8.7e-17 Score=136.86 Aligned_cols=174 Identities=17% Similarity=0.171 Sum_probs=127.2
Q ss_pred HHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh
Q 024637 78 YYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF 157 (265)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 157 (265)
++....+.|.+..+. +.+.....+.....++..+++.++.++++||+|||++++.+.++.+++.+.+..
T Consensus 287 ~~~~~~~~p~i~~~~-----------g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~ 355 (479)
T PRK10077 287 INVVLYYAPEIFKTL-----------GASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGT 355 (479)
T ss_pred hhHHHHHHHHHHHHc-----------CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHH
Confidence 445556677776443 355455566666777888999999999999999999999999888887766543
Q ss_pred c---chh-HHHHHHHHHHHHHHhhh-hhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHH------hhcch
Q 024637 158 H---QSA-VVTTLLLFGVRMCVTGT-ITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLV------TSCHL 226 (265)
Q Consensus 158 ~---~~~-~~~~~~~~~~g~~~~~~-~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~------~~~~~ 226 (265)
. ... .......++.+++.+.. .+..+.+++|.+|++.|+++.|+.+...++|+++++.+.+.+. +..++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~ 435 (479)
T PRK10077 356 AFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHN 435 (479)
T ss_pred HHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccC
Confidence 1 111 12222333344444332 3677899999999999999999999999999999987776554 46677
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCccccccchhhhhhh
Q 024637 227 RLAVILFEVVFVLAIASSLLFPFETMGRELKDTVDA 262 (265)
Q Consensus 227 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 262 (265)
...+.+.++++++++++.+++.||++++..+|.++.
T Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 471 (479)
T PRK10077 436 GFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEAL 471 (479)
T ss_pred ccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHH
Confidence 778888888878777777777889998877665443
No 42
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.77 E-value=2.7e-17 Score=136.45 Aligned_cols=164 Identities=11% Similarity=0.050 Sum_probs=137.8
Q ss_pred HHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh
Q 024637 78 YYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF 157 (265)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 157 (265)
.......+|.+.++. +.+..+.++..+...++..++.++.|+++||+|||+.+..+.++.+++.+....
T Consensus 19 ~~~~~~~lp~~~~~~-----------~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~ 87 (392)
T PRK10473 19 IDMYLVGLPRIAADL-----------NASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL 87 (392)
T ss_pred HHHHhhhHHHHHHHh-----------CCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 333445567666443 467778888888888999999999999999999999999999999998888888
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 024637 158 HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVF 237 (265)
Q Consensus 158 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 237 (265)
.++.+..++.+++.|++.+...+....++.|.+|+++|+++.++.+....++..++|.+.+.+.+..+|+..+.+.+++.
T Consensus 88 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~ 167 (392)
T PRK10473 88 AETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMG 167 (392)
T ss_pred hCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHH
Confidence 88888888888999998888888999999999999999999999999999999999999999888889988888888777
Q ss_pred HHHHHHHhcCCcccc
Q 024637 238 VLAIASSLLFPFETM 252 (265)
Q Consensus 238 ~i~~~~~~~~~~~~~ 252 (265)
++..++.++..||++
T Consensus 168 ~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 168 ILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHHHcCCCC
Confidence 766666555555554
No 43
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.77 E-value=4.7e-17 Score=135.25 Aligned_cols=171 Identities=15% Similarity=0.052 Sum_probs=139.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHH
Q 024637 69 VLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSA 148 (265)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~ 148 (265)
...+......+....+.|.+.++.. +.+....++..+...+...+.+++.|+++||+|||+++.++.++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~----------g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~ 86 (400)
T PRK11646 17 IDNMLVVLGFFVVFPLISIRFVDQL----------GWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMR 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----------CCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHH
Confidence 4444445555555555665553332 477788899888888888889999999999999999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhH
Q 024637 149 CIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRL 228 (265)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~ 228 (265)
+++.+.+.+.++.+.+++.+++.+++.+...+...+++.|.+|++.|+++.|+.+...++|..+||.+++++. ..+|++
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~ 165 (400)
T PRK11646 87 AAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRL 165 (400)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHH
Confidence 9999888888888888888899998888788888999999999999999999999999999999999999998 668888
Q ss_pred HHHHHHHHHHHHHHHHhcCCcc
Q 024637 229 AVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 229 ~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
.+.+.+++.++..++..+..||
T Consensus 166 ~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 166 VCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhCCc
Confidence 8888777766655444444444
No 44
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.77 E-value=2.1e-17 Score=139.56 Aligned_cols=169 Identities=15% Similarity=0.033 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 024637 71 FFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACI 150 (265)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~ 150 (265)
..........+....|.+.++ +.+..+.++..+...++..++.++.|+++||+|||+++.++.++.++
T Consensus 38 ~~~~~~~~~~~~~~~p~l~~~------------g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i 105 (452)
T PRK11273 38 YAAYYLVRKNFALAMPYLVEQ------------GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAA 105 (452)
T ss_pred HHHHHHHHHHHHHhhHHHHHc------------CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHH
Confidence 333333334455667766533 37778889999999999999999999999999999999999998888
Q ss_pred HHHHHhhc----chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHH-HHHHHHHHHHhhcc
Q 024637 151 FLLPLVFH----QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGM-VCPLVAVGLVTSCH 225 (265)
Q Consensus 151 ~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~-~~~~i~~~l~~~~~ 225 (265)
+.+.+.+. .+.+..++.+++.|++.+..++.....+.+.+|+++|++++|+.+....+|+. .+|.+...+....+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~g 185 (452)
T PRK11273 106 VMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFND 185 (452)
T ss_pred HHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcc
Confidence 88777653 35666777788889888888787778889999999999999999888888864 45554433333458
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 226 LRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 226 ~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
|+..+++.+++.++..++.+++.||+
T Consensus 186 w~~~f~i~~~~~~~~~~l~~~~~~~~ 211 (452)
T PRK11273 186 WHAALYMPAFAAILVALFAFAMMRDT 211 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 88888887777666555555444443
No 45
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.76 E-value=4.4e-17 Score=133.90 Aligned_cols=173 Identities=20% Similarity=0.231 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHH
Q 024637 64 TLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVL 143 (265)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~ 143 (265)
++..++..+.....++....+.|.+.++.. +.+..+.++..++..++..++.++.|+++||+|||+.+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 72 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDL----------GLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTL 72 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHh----------CCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 344555566666777778888886332222 5788888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHh
Q 024637 144 MFVSACIFLLPLVFHQ-SAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVT 222 (265)
Q Consensus 144 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~ 222 (265)
+.++..++.+.+.+.+ +.+.+++.+++.|++.+ ..+....+++|.+|+++|+.+.++.....++|..+++.+.+.+..
T Consensus 73 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 73 SLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999998888877 88888888999888754 456678899999999999999999998888888888888777665
Q ss_pred h----------cchhHHH-HHHHHHHHHHHHHHhcC
Q 024637 223 S----------CHLRLAV-ILFEVVFVLAIASSLLF 247 (265)
Q Consensus 223 ~----------~~~~~~~-~~~~~~~~i~~~~~~~~ 247 (265)
. .+|++.+ +..+++..+..++.+..
T Consensus 152 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 187 (366)
T TIGR00886 152 SLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFV 187 (366)
T ss_pred HHHhcccccccccccchhHHHHHHHHHHHHHHHHHh
Confidence 2 3677777 43344444444443333
No 46
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.76 E-value=1.7e-17 Score=136.54 Aligned_cols=168 Identities=14% Similarity=0.074 Sum_probs=138.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHH
Q 024637 69 VLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSA 148 (265)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~ 148 (265)
+.........|....+.|.+.++. +.+..+.++..++..++..++.++.|+++||+|||+++.++.++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~ 78 (377)
T TIGR00890 10 VIMCFTSGYVYTWTLLAPPLGRYF-----------GVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILY 78 (377)
T ss_pred HHHHHHhhHHhhhhhHHHHHHHHh-----------CCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHH
Confidence 333333344666777788777444 478889999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhH
Q 024637 149 CIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRL 228 (265)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~ 228 (265)
+++.+...+.++.+.+++.+++.|++.+..++.....+.+.+| ++|+.+.++......+|..+++.+.+.+.+..+|++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 157 (377)
T TIGR00890 79 GLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPA 157 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHH
Confidence 9999888888999999999999999988887777888888887 469999999999988998887777777777889999
Q ss_pred HHHHHHHHHHHHHHHHhcCC
Q 024637 229 AVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 229 ~~~~~~~~~~i~~~~~~~~~ 248 (265)
.+.+.+++.++..+..+++.
T Consensus 158 ~f~~~~~~~~~~~~~~~~~~ 177 (377)
T TIGR00890 158 AFIYMGIIFLLVIVLGAFLI 177 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhe
Confidence 99888887777666555444
No 47
>PRK09952 shikimate transporter; Provisional
Probab=99.76 E-value=2.5e-16 Score=132.41 Aligned_cols=173 Identities=14% Similarity=0.179 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHH
Q 024637 68 WVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVS 147 (265)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~ 147 (265)
....+.....+|....|.|.+.++.. +.+.........+.++..+++.++.|+++||+|||+++.++.++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~y~~~~~----------g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~ 325 (438)
T PRK09952 256 IALRLCELLTMYIVTAFALNYSTQNL----------GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALI 325 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 33445556667777788888875433 34444434444555667788889999999999999998887766
Q ss_pred HHHHHHHHhh---c-chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhh-HHHHHHHHHHHHHHh
Q 024637 148 ACIFLLPLVF---H-QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGK-VGGMVCPLVAVGLVT 222 (265)
Q Consensus 148 ~~~~~~~~~~---~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~-~g~~~~~~i~~~l~~ 222 (265)
..++.+.+.. . ++.+..++..++.+++.+...+..+++++|.+|++.|+++.|+.+..+. +|+.++|.+.+++.+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~ 405 (438)
T PRK09952 326 GTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVT 405 (438)
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6554433322 2 2233334445555677777778889999999999999999999887766 899999999999988
Q ss_pred hc--chhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 223 SC--HLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 223 ~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
.. +|...+...++..+++++..+.. +|+
T Consensus 406 ~~~~~~~~~~~~~~~~~~i~~v~~~~~-~~~ 435 (438)
T PRK09952 406 YFGGSWHSVAIYLLAGCLISAMTALLM-KDN 435 (438)
T ss_pred hcCCCchHHHHHHHHHHHHHHHHHHHc-ccc
Confidence 54 35555665656666665555544 454
No 48
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.75 E-value=9.9e-18 Score=138.03 Aligned_cols=169 Identities=14% Similarity=0.058 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q 024637 72 FANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIF 151 (265)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~ 151 (265)
+........+....|.+.++. +.+..+.++..++..++..++.++.|+++||+|||+++.++.++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~-----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 73 (379)
T TIGR00881 5 AAYYLVRKNFALAMPYLVEEI-----------GLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIV 73 (379)
T ss_pred hHHHHhHHhhhhhhHHHHHHh-----------CCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHH
Confidence 344445555666667666443 477788899999999999999999999999999999999999999999
Q ss_pred HHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHH-HHHHHHHhhcchhHHH
Q 024637 152 LLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCP-LVAVGLVTSCHLRLAV 230 (265)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~-~i~~~l~~~~~~~~~~ 230 (265)
.++..+.++.+.+++.+++.|++.+...+...+++.|.+|+++|+.+.++.+....+|..++| .+.+.+.+..+|+..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 153 (379)
T TIGR00881 74 NLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVF 153 (379)
T ss_pred HHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHH
Confidence 998888889899999999999999988999999999999999999999999999999999999 5767777777888888
Q ss_pred HHHHHHHHHHHHHHhcCCccc
Q 024637 231 ILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 231 ~~~~~~~~i~~~~~~~~~~~~ 251 (265)
.+.+++.++..++.++..+|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 154 IVPGIIAIIVSLICFLLLRDS 174 (379)
T ss_pred HHHHHHHHHHHHHHheeeCCC
Confidence 887777766655555554443
No 49
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.75 E-value=1.8e-16 Score=132.16 Aligned_cols=174 Identities=16% Similarity=0.112 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCch-----HHHHHHHHHhhhhHHHHHHHHHHhhhchHHH
Q 024637 66 LLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNS-----LYVDVFIASLAELPGLILSAIIVDKIGRKLS 140 (265)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 140 (265)
..++..+.....+.....++|.+.++.+ .+..+ .++..++..++..++.++.|+++||+|||++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 86 (408)
T PRK09874 18 VAWLGCFLTGAAFSLVMPFLPLYVEQLG-----------VTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIM 86 (408)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhC-----------CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHH
Confidence 3344445555566666677888875543 33332 3667778888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHH
Q 024637 141 MVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGL 220 (265)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l 220 (265)
+..+.++.+++.+++...++.+.+++.+++.|++.+ ..+....++.+.+|+++|+.+.++.+....+|..++|.+.+.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 165 (408)
T PRK09874 87 LLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLL 165 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888888877777888888888888887644 4577777888999999999999999999999999999999999
Q ss_pred HhhcchhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 221 VTSCHLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
.+..+|+..+.+.+++.++..+..+++.+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 166 ADSYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9988999888888877776666555554443
No 50
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.75 E-value=1.4e-16 Score=135.15 Aligned_cols=175 Identities=12% Similarity=0.062 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHH
Q 024637 63 TTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMV 142 (265)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 142 (265)
.++...+..++....+++...|.|.|.++.. +.+..+.++......++.+++.+++|+++||+|||+.+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~----------g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~ 328 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQEL----------GFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALV 328 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHH
Confidence 4555555666666677788889999886544 467777788888888899999999999999999988766
Q ss_pred HHHHHHHHHHH--HHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhH-HHHHHHHHHHH
Q 024637 143 LMFVSACIFLL--PLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKV-GGMVCPLVAVG 219 (265)
Q Consensus 143 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~-g~~~~~~i~~~ 219 (265)
....+..++.. ......+.+...+..++.|++..+..........|.+|++.||++.|+.+..+++ |++++|.+.|+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~ 408 (467)
T PRK09556 329 ACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGM 408 (467)
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHH
Confidence 55444333322 2222344444545556666544444344446677999999999999999999996 77999999999
Q ss_pred HHh------------hcchhHHHHHHHHHHHHHHHHHhcC
Q 024637 220 LVT------------SCHLRLAVILFEVVFVLAIASSLLF 247 (265)
Q Consensus 220 l~~------------~~~~~~~~~~~~~~~~i~~~~~~~~ 247 (265)
+.+ ..+|...|.+.+++.+++.+..+++
T Consensus 409 i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 409 IADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred HhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 999 5678888888777777766655544
No 51
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.75 E-value=7.9e-19 Score=141.31 Aligned_cols=186 Identities=15% Similarity=0.031 Sum_probs=159.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHH
Q 024637 60 LIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 139 (265)
..+...++++....+..--|.+..-++...+.. +.+....+++.+...+...+.++++|+++||+.|++
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~f-----------ni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~ 99 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVLKEVQTYF-----------NISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKR 99 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhc-----------CCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcce
Confidence 345556666667777777777665554443222 577788899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHH
Q 024637 140 SMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
++.+|..+..++.++..+...+|.+++++.+.|+|-....++..++++|+||...|++++++.+....+|.++|-..+..
T Consensus 100 v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~ 179 (493)
T KOG1330|consen 100 VIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSV 179 (493)
T ss_pred EEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHhhcc-hhHHHHHHHHHHHHHHHHHhcCCccccccch
Q 024637 220 LVTSCH-LRLAVILFEVVFVLAIASSLLFPFETMGREL 256 (265)
Q Consensus 220 l~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 256 (265)
+.+..+ |++.+...+++.++.+++.+++.+|+.++..
T Consensus 180 va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~ 217 (493)
T KOG1330|consen 180 VASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGAR 217 (493)
T ss_pred eccCccceEEEEEeehHHHHHHHHHHHhhccCcccccc
Confidence 877766 8899999999999888888888877765433
No 52
>PRK11043 putative transporter; Provisional
Probab=99.74 E-value=3.2e-16 Score=130.47 Aligned_cols=147 Identities=15% Similarity=0.154 Sum_probs=128.1
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
+.+..+.++..++..++..++.++.|+++||+|||+++..+.++..++.+...+.++.+.+++.+++.|++.+...+...
T Consensus 37 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~ 116 (401)
T PRK11043 37 QTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQ 116 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHH
Confidence 47778889999999999999999999999999999999999998888888888888888888889998888877777778
Q ss_pred hhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 184 IYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 184 ~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
.++.|.+|++.++...+.......++..++|.+.+++.+..+|+..+.+.+++.++..+..+++.++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 117 ALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 8899999999899999998888889999999999999999999988888877777666665555433
No 53
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.74 E-value=1.6e-16 Score=132.14 Aligned_cols=170 Identities=10% Similarity=-0.045 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHH
Q 024637 62 RTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSM 141 (265)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 141 (265)
+.+....+..+............+|.+.++.. +.+..+.++..+...++..++.++.|+++||+|||+++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~----------g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l 84 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQL----------GFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAV 84 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchH
Confidence 44444555555555555555556676553322 47778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh---c-----chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHH
Q 024637 142 VLMFVSACIFLLPLVF---H-----QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVC 213 (265)
Q Consensus 142 ~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~ 213 (265)
..+.++.+++.+.+.. . .+.+.+++.+++.|++.+...+....++.|.+|+++|+++.++......+|..++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g 164 (399)
T PRK05122 85 VFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIG 164 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHH
Confidence 9998877766544333 2 1345677888999999988888888999999999999999999888888999999
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 024637 214 PLVAVGLVTSCHLRLAVILFEVVFVLAI 241 (265)
Q Consensus 214 ~~i~~~l~~~~~~~~~~~~~~~~~~i~~ 241 (265)
|.+++.+.+..||+..+++..++.++..
T Consensus 165 ~~l~~~l~~~~g~~~~~~~~~~~~~~~~ 192 (399)
T PRK05122 165 APLGVLLYHWGGLAGLGLLIMLLALLGL 192 (399)
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 9999999999898877666555444433
No 54
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.74 E-value=1.9e-17 Score=140.32 Aligned_cols=175 Identities=13% Similarity=0.013 Sum_probs=136.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHH
Q 024637 62 RTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSM 141 (265)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 141 (265)
..+...++.++........+....|.+.++. +.+..+.++..+.+.++..++.++.|+++||+|||+++
T Consensus 29 ~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~-----------~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l 97 (467)
T PRK09556 29 QSYLVVFIGYLTMYLIRKNFKAAQNDMISTY-----------GLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFL 97 (467)
T ss_pred HHHHHHHHHHHHHHHHhcChhhhhHHHHHhc-----------CCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchH
Confidence 3344444445545555555666677776544 47778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh-----cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHH
Q 024637 142 VLMFVSACIFLLPLVF-----HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLV 216 (265)
Q Consensus 142 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i 216 (265)
.++.++.++..+.+.. .++.+.+++.+++.|++.+...+....+++|++|+++||.++|+......+|.++++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i 177 (467)
T PRK09556 98 PFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGV 177 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHH
Confidence 8887777766655443 57888899999999999998889999999999999999999999999999999999998
Q ss_pred HHHHHhhc---chhHHHHHHHHHHHHHHHHHhcC
Q 024637 217 AVGLVTSC---HLRLAVILFEVVFVLAIASSLLF 247 (265)
Q Consensus 217 ~~~l~~~~---~~~~~~~~~~~~~~i~~~~~~~~ 247 (265)
..++.+.. +|+..+.+.+++.++.+++.+++
T Consensus 178 ~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 178 ALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred HHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHh
Confidence 87776653 46666666666665555544444
No 55
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.74 E-value=6.4e-16 Score=131.79 Aligned_cols=138 Identities=17% Similarity=0.073 Sum_probs=111.9
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHH--------HHHHHHHHHHHHhhhhhhhhhh
Q 024637 114 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVV--------TTLLLFGVRMCVTGTITVATIY 185 (265)
Q Consensus 114 ~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~ 185 (265)
.++..++..+|+++.|+++||+|||+++.++.++++++.++..+.+++.. +++.+++.|++.++.++....+
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~ 142 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIF 142 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHH
Confidence 35556788899999999999999999999999999999999999887653 7788999999999999999999
Q ss_pred cccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHH--------hhcchhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 186 APEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLV--------TSCHLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 186 ~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~--------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
++|.+|++.|+...++......+|..+++.+...+. ...||++.|++.+.+.+++.+ .....||+.
T Consensus 143 ~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~-~~~~~~esp 216 (490)
T PRK10642 143 VAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLY-LRHALEETP 216 (490)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHH-HHHcCCCCh
Confidence 999999999999999988877788887776655443 256899998876554444333 334445653
No 56
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.74 E-value=7.9e-17 Score=132.93 Aligned_cols=148 Identities=13% Similarity=0.137 Sum_probs=131.8
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
+.+..+.++..++..++..++.++.|+++||+|||+++..+.++.+++.+.+.+.++.+..++.+++.|++.+...+...
T Consensus 22 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 101 (377)
T PRK11102 22 GVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVIN 101 (377)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47778889999999999999999999999999999999999999999998888888888888899999999988888999
Q ss_pred hhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 184 IYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 184 ~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
+++.|.+|+++|++++++.+....+|..++|.+.+.+.+..+|+..+.+.+.+.++..+...+..||+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (377)
T PRK11102 102 ALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPET 169 (377)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 99999999999999999999999999999999999999988999888888777776666655554454
No 57
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.74 E-value=5.6e-16 Score=130.21 Aligned_cols=180 Identities=18% Similarity=0.037 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCch---HHHHHHHHHhhhhHHHHHHHHHHhhhchHHH
Q 024637 64 TLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNS---LYVDVFIASLAELPGLILSAIIVDKIGRKLS 140 (265)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 140 (265)
++..++.++........+....|.+.++.+. .+.+..+ .........++..++++++|+++||+|||++
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~ 95 (432)
T PRK10406 24 IVGASSGNLVEWFDFYVYSFCSLYFAHIFFP--------SGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKS 95 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH
Confidence 3344444555555555556666666543320 0112222 2333444456666999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcchh--------HHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHH
Q 024637 141 MVLMFVSACIFLLPLVFHQSA--------VVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMV 212 (265)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~ 212 (265)
+.++.++.+++.+...+.++. ..+++++++.|++.++.++...++++|.+|+++|+...++.+.....|..+
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~ 175 (432)
T PRK10406 96 MLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLL 175 (432)
T ss_pred HHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHH
Confidence 999999999999888776654 357788999999999999999999999999999999999888777777777
Q ss_pred HHHHHHHHH--------hhcchhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 213 CPLVAVGLV--------TSCHLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 213 ~~~i~~~l~--------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
++.+...+. +..||+.+|++.++..++... .....||++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~ 222 (432)
T PRK10406 176 ALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETS 222 (432)
T ss_pred HHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCc
Confidence 777655443 256899999876665554433 333344543
No 58
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.74 E-value=2.5e-16 Score=132.05 Aligned_cols=168 Identities=18% Similarity=0.217 Sum_probs=114.8
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHH
Q 024637 51 SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAI 130 (265)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 130 (265)
+++++++++..+..+......+......+.+..++|.+.++. +.+....+.......++.+++.++.|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~g~~~~g~ 288 (426)
T PRK12307 220 SMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGE-----------GFDTGVVSNLMTAAAFGTVLGNIVWGL 288 (426)
T ss_pred HHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666544444434333333333444445566778877543 355566677777888899999999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH--HHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhH
Q 024637 131 IVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRM--CVTGTITVATIYAPEIYPTPARTTGFGVASSLGKV 208 (265)
Q Consensus 131 l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~ 208 (265)
+.||+|||+.+..+.++..+..+......+.....+..++.+. +..+..+..+.++.|.+|++.|++++|+.+...++
T Consensus 289 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~ 368 (426)
T PRK12307 289 CADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAAT 368 (426)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhH
Confidence 9999999999888887776665544432221111222222222 22233456667889999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcchhHH
Q 024637 209 GGMVCPLVAVGLVTSCHLRLA 229 (265)
Q Consensus 209 g~~~~~~i~~~l~~~~~~~~~ 229 (265)
|+.++|.+.|++.+..|....
T Consensus 369 ~~~~gp~~~g~l~~~~g~~~~ 389 (426)
T PRK12307 369 SGTFNSMAATWLGITMGLGAA 389 (426)
T ss_pred HHHHHHHHHHHHHHcccHHHH
Confidence 999999999999998886543
No 59
>PRK12382 putative transporter; Provisional
Probab=99.74 E-value=3.8e-16 Score=129.64 Aligned_cols=160 Identities=9% Similarity=-0.046 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHH
Q 024637 67 LWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFV 146 (265)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~ 146 (265)
..+..+............+|.+..+.. +.+..+.++..+...++..+++++.|+++||+|||+++..+.+
T Consensus 20 ~~~~~~~~~~~~~~~~p~l~~~l~~~l----------g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~ 89 (392)
T PRK12382 20 IAFAVFLTYMTVGLPLPVIPLFVHHDL----------GFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGML 89 (392)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhc----------CCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHH
Confidence 333334444444444455665543222 5788899999999999999999999999999999999998877
Q ss_pred HHHHHHHHHh---h-----cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHH
Q 024637 147 SACIFLLPLV---F-----HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAV 218 (265)
Q Consensus 147 ~~~~~~~~~~---~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~ 218 (265)
...++.+... . ..+.+.+++.+++.|++.+...+...+++.|.+|+++|++++++......+|..++|.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~ 169 (392)
T PRK12382 90 ACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGL 169 (392)
T ss_pred HHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHH
Confidence 7665543221 1 2456778888999999988888888889999999999999999999888899999999999
Q ss_pred HHHhhcchhHHHHHHHHH
Q 024637 219 GLVTSCHLRLAVILFEVV 236 (265)
Q Consensus 219 ~l~~~~~~~~~~~~~~~~ 236 (265)
++.+..||+..+.+..+.
T Consensus 170 ~l~~~~g~~~~~~~~~~~ 187 (392)
T PRK12382 170 LLHSHFGFAALALTTMVL 187 (392)
T ss_pred HHHhccChHHHHHHHHHH
Confidence 998888887655544333
No 60
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.74 E-value=9.4e-16 Score=127.47 Aligned_cols=179 Identities=12% Similarity=0.080 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHH
Q 024637 61 IRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLS 140 (265)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 140 (265)
++.+++..+..+.....++.+....+.+.+... +.+..+.++..++..++..++.+..|++.||+|.|++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~----------~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v 102 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGF----------NFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRW 102 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence 455556666666666666666666666553212 5888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhc-----chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHH
Q 024637 141 MVLMFVSACIFLLPLVFH-----QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPL 215 (265)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~ 215 (265)
+.++.++..+..+...+. ++++.+++.+++.|++ +..++.....+++++|+++||++.|+....+++|..++++
T Consensus 103 ~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~ 181 (462)
T PRK15034 103 TVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQL 181 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHH
Confidence 999999988888877765 7888999999999997 7788999999999999999999999998888888877777
Q ss_pred HHHHHH-----h-------------hcchhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 216 VAVGLV-----T-------------SCHLRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 216 i~~~l~-----~-------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
+.+.+. + ..+++.+.+++..+.++..++.+++.++
T Consensus 182 l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~ 234 (462)
T PRK15034 182 VAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMND 234 (462)
T ss_pred HHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 666544 2 2235556667777666666666655543
No 61
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.74 E-value=7.4e-17 Score=135.71 Aligned_cols=178 Identities=12% Similarity=0.059 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHH
Q 024637 62 RTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSM 141 (265)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 141 (265)
+.++...+.+.......+.+....|.+.+ . +.+..+.++..++..++..++.++.|+++||+|||+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~-----------g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~ 94 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALAMPYLVE-Q-----------GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFL 94 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhhhHHHHH-c-----------CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceeh
Confidence 33344444444444444445555665542 2 47778889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhc----chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHH
Q 024637 142 VLMFVSACIFLLPLVFH----QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVA 217 (265)
Q Consensus 142 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~ 217 (265)
..+.++.+++.+..... .+.+.+.+.+++.|++.+..++.....+.|.+|+++|++++|+.+....+|+.++|.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~ 174 (438)
T TIGR00712 95 PAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLV 174 (438)
T ss_pred HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHH
Confidence 99888888887766543 34555667788888888888888888999999999999999999999999999998887
Q ss_pred HHHHh-hcchhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 218 VGLVT-SCHLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 218 ~~l~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
+.+.+ ..+|+..+++.+++.++..+..+++.||+
T Consensus 175 ~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 175 LLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 76554 46899888888887776665555554443
No 62
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.73 E-value=4.5e-16 Score=133.15 Aligned_cols=148 Identities=17% Similarity=0.125 Sum_probs=119.4
Q ss_pred CCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcch------hHHHHHHHHHHHHHHhhh
Q 024637 105 SKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS------AVVTTLLLFGVRMCVTGT 178 (265)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~ 178 (265)
.+....++......++.+++.++.|+++||+|||+++.++.++..++.++..+..+ .+.+++.+++.|++.++.
T Consensus 53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~ 132 (502)
T TIGR00887 53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGD 132 (502)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhh
Confidence 33445677888888999999999999999999999999999988888877766543 567889999999999999
Q ss_pred hhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHh-----------------------hcchhHHHHHHHH
Q 024637 179 ITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVT-----------------------SCHLRLAVILFEV 235 (265)
Q Consensus 179 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~-----------------------~~~~~~~~~~~~~ 235 (265)
.+....+++|.+|++.|+++.++.+....+|..+++.+...+.. ..+|+..+.+.++
T Consensus 133 ~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~i 212 (502)
T TIGR00887 133 YPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAV 212 (502)
T ss_pred hHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHH
Confidence 99999999999999999999999999999999999988876542 1268877765555
Q ss_pred HHHHHHHHHhcCCccccc
Q 024637 236 VFVLAIASSLLFPFETMG 253 (265)
Q Consensus 236 ~~~i~~~~~~~~~~~~~~ 253 (265)
..++..+.. +..||+.+
T Consensus 213 p~~i~~~~~-~~lpESpr 229 (502)
T TIGR00887 213 PALLALYFR-LTIPETPR 229 (502)
T ss_pred HHHHHHHHH-HhCCCCHH
Confidence 555444443 44467643
No 63
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.73 E-value=2e-16 Score=132.50 Aligned_cols=146 Identities=12% Similarity=0.066 Sum_probs=119.4
Q ss_pred CCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhh
Q 024637 105 SKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATI 184 (265)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 184 (265)
.+....+...++..++..++.++.|++.||+|+|+.+.++.++.++..++..+.++.+.+++..++.+++.+...+....
T Consensus 259 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 338 (420)
T PRK09528 259 QGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFK 338 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345677777778888899999999999999999999988888888877777778777777778888777777777788
Q ss_pred hcccccCCCcchhhHHH-HHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 185 YAPEIYPTPARTTGFGV-ASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 185 ~~~e~~p~~~r~~~~g~-~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
++.|.+|++.|++..+. .+....+|.+++|.+.|++.+..|++..+...+++.++..++.++..++
T Consensus 339 ~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 339 YITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999988766 4566779999999999999999999988888888777666555555433
No 64
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.73 E-value=2.4e-16 Score=132.43 Aligned_cols=181 Identities=13% Similarity=0.049 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhh--ch-HH
Q 024637 63 TTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKI--GR-KL 139 (265)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--gr-r~ 139 (265)
.++...+..+.....++++..|.|.+..+.. +.+..+.+....+..++..++.++.|+++||+ ++ +.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~----------g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~ 313 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETL----------GVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGP 313 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------CCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccH
Confidence 3444444455555666777788898885443 46667778888888899999999999999998 33 33
Q ss_pred HHHHHHHHHHHH--HHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHH
Q 024637 140 SMVLMFVSACIF--LLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVA 217 (265)
Q Consensus 140 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~ 217 (265)
......+...+. .+......+........+..|++..+..........|.+|++.|+++.|+.+...++|++++|.+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~ 393 (434)
T PRK11663 314 MNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPL 393 (434)
T ss_pred HHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccH
Confidence 222221111111 111111222222223333334333323334456678999999999999999999999999999999
Q ss_pred HHHHhhcchhHHHHHHHHHHHHHHHHHhcCCccccc
Q 024637 218 VGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 253 (265)
Q Consensus 218 ~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 253 (265)
|++.+..|+...+...+++.++.++..+...+++++
T Consensus 394 g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 429 (434)
T PRK11663 394 AKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQAP 429 (434)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhch
Confidence 999999999888888888877777766655544443
No 65
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.73 E-value=8.4e-16 Score=129.11 Aligned_cols=184 Identities=20% Similarity=0.240 Sum_probs=113.7
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHH
Q 024637 51 SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAI 130 (265)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 130 (265)
+++++++++ +..+......+.....+|.+..|+|.+..+.. +.+..+.+....+..++..++.++.|+
T Consensus 234 ~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~----------g~s~~~~~~~~~i~~~~~~i~~~~~G~ 301 (432)
T PRK10406 234 SLKGLWRNR--RAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTA----------GMHANVASGIMTAALFVFMLIQPLIGA 301 (432)
T ss_pred cHHHHHhhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466666432 22222222233345667888889999885443 355556666676667777888889999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHh--h--cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhh
Q 024637 131 IVDKIGRKLSMVLMFVSACIFLLPLV--F--HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLG 206 (265)
Q Consensus 131 l~dr~grr~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~ 206 (265)
++||+|||+++.++.++.++..+.+. . ..+....+....+..++.+...+..+.+.+|.+|++.|++++|+.+..+
T Consensus 302 l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g 381 (432)
T PRK10406 302 LSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVA 381 (432)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHH
Confidence 99999999988776665443332221 1 2223322222222333334444567788999999999999999999888
Q ss_pred hH-HHHHHHHHHHHHHhhcchhH-HHHHHHHHHHHHHHHHhcC
Q 024637 207 KV-GGMVCPLVAVGLVTSCHLRL-AVILFEVVFVLAIASSLLF 247 (265)
Q Consensus 207 ~~-g~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~i~~~~~~~~ 247 (265)
++ ++...|.+.+.+ +..|++. .++..++..+++.+..+++
T Consensus 382 ~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 382 NALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred HHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 74 455688888855 5556444 3444444445555554443
No 66
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.73 E-value=5.4e-16 Score=130.99 Aligned_cols=181 Identities=15% Similarity=0.137 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhh--chHHH
Q 024637 63 TTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKI--GRKLS 140 (265)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--grr~~ 140 (265)
.++...+..+......++...|+|.|.++.. +.+....+....+..++.+++.++.|+++||+ +||..
T Consensus 254 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~----------g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~ 323 (452)
T PRK11273 254 LLWYIAIANVFVYLLRYGILDWSPTYLKEVK----------HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGA 323 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcch
Confidence 3444444455555666778889999986543 45656677777788888899999999999999 55543
Q ss_pred HH-HHHHHHHHHHHHHhh--cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHH-HHHH
Q 024637 141 MV-LMFVSACIFLLPLVF--HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMV-CPLV 216 (265)
Q Consensus 141 ~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~-~~~i 216 (265)
.. ....+..++.+.+.. ..+.+..++..++.+.+..........+..|.+|++.||++.|+.+...++|+.+ +|.+
T Consensus 324 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v 403 (452)
T PRK11273 324 TGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAI 403 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhh
Confidence 22 222222232222222 2233333333444444333333334456779999999999999999999988665 7999
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHHHHHHhcCC-ccccc
Q 024637 217 AVGLVTSCHLRLAVILFEVVFVLAIASSLLFP-FETMG 253 (265)
Q Consensus 217 ~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~ 253 (265)
.|++.+..|+...|.+.++.++++++....+. +|+|+
T Consensus 404 ~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 441 (452)
T PRK11273 404 VGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRH 441 (452)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 99999999998888888877777766655443 34443
No 67
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.72 E-value=3.2e-16 Score=133.39 Aligned_cols=148 Identities=16% Similarity=0.051 Sum_probs=120.8
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhc------------chhHHHHHHHHHH
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH------------QSAVVTTLLLFGV 171 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 171 (265)
+.+..+.++..+...++..++.++.|+++||+|||+++.++.++..++.+...+. ...+.+++.+++.
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~ 130 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIG 130 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHH
Confidence 4666788899999999999999999999999999999999998888777665541 1234567889999
Q ss_pred HHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHH--------hhcchhHHHHHHHHHHHHHHHH
Q 024637 172 RMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLV--------TSCHLRLAVILFEVVFVLAIAS 243 (265)
Q Consensus 172 g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~--------~~~~~~~~~~~~~~~~~i~~~~ 243 (265)
|++.+...+...++++|.+|+++|+.++++.+....+|..+++.+.+.+. +..+|++.+.+.++..++..+.
T Consensus 131 G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~ 210 (479)
T PRK10077 131 GIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML 210 (479)
T ss_pred hhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988899998887766553 3468998888777666665554
Q ss_pred HhcCCcccc
Q 024637 244 SLLFPFETM 252 (265)
Q Consensus 244 ~~~~~~~~~ 252 (265)
.++ .||+.
T Consensus 211 ~~~-l~~s~ 218 (479)
T PRK10077 211 LYF-VPETP 218 (479)
T ss_pred HHc-CCCCc
Confidence 444 45654
No 68
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.72 E-value=2.6e-16 Score=131.44 Aligned_cols=147 Identities=10% Similarity=0.109 Sum_probs=119.0
Q ss_pred chHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhc-ch---hHHHHHHHHHHHHHHhhhhhhhh
Q 024637 108 NSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH-QS---AVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
...+...++..+..+++.++.|+++||+|||+++.++.++.+++...+... .+ .+..++..++.+++.+...+...
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~ 330 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGS 330 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556777888888999999999999999999999999999888876655552 21 24455667778888887778888
Q ss_pred hhcccccCCCcchhhHHHHH-hhhhHHHHHHHHHHHHHHhhc------chhHHHHHHHHHHHHHHHHHhcCCcccccc
Q 024637 184 IYAPEIYPTPARTTGFGVAS-SLGKVGGMVCPLVAVGLVTSC------HLRLAVILFEVVFVLAIASSLLFPFETMGR 254 (265)
Q Consensus 184 ~~~~e~~p~~~r~~~~g~~~-~~~~~g~~~~~~i~~~l~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 254 (265)
.++.|.+|++.|++++|+.+ ....+|.++||.+.|++.+.. ||+..+...+++.+++.++.+++.+|+++.
T Consensus 331 ~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 331 VFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 99999999999999999997 566799999999999999874 477778877777777777777776676543
No 69
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.72 E-value=1.4e-16 Score=135.05 Aligned_cols=146 Identities=16% Similarity=0.109 Sum_probs=121.5
Q ss_pred CCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh---cchhHHHHHHHHHHHHHHhhhhhh
Q 024637 105 SKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF---HQSAVVTTLLLFGVRMCVTGTITV 181 (265)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~ 181 (265)
.+..+.++..++..++..++.++.|+++||+|||+++.++.++..++.++... ..+.+.+++.+++.|++.+...+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 147 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASAL 147 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhH
Confidence 44678899999999999999999999999999999999999888888777744 334457888999999999999999
Q ss_pred hhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHH---HHHHhhcchhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 182 ATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVA---VGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 182 ~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~---~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
...++.|.+|+++|+.++++.+....+|..+++.+. +...+..+|++.+.+.+...++..+..+++ ||+
T Consensus 148 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l-~~~ 219 (481)
T TIGR00879 148 VPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFL-PES 219 (481)
T ss_pred HHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcC-CCC
Confidence 999999999999999999999999999999999998 655567789888888555555444444444 454
No 70
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.72 E-value=4.1e-16 Score=129.79 Aligned_cols=162 Identities=7% Similarity=-0.070 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHH
Q 024637 62 RTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSM 141 (265)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 141 (265)
+.+....+..+......+....+.+.+.++. +.+..+.++..+...++..++.++.|++.||+|||+++
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l 81 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKAL-----------GLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTM 81 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHHh-----------CCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH
Confidence 3444444444444444444444556666443 47778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh---h-cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHH-HHHHHH
Q 024637 142 VLMFVSACIFLLPLV---F-HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGG-MVCPLV 216 (265)
Q Consensus 142 ~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~-~~~~~i 216 (265)
..+.++.+++.+... . ..+.+..++.+++.|++.+...+.....+.+.+|+++|+++.|+.+...++|. .++|.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~ 161 (402)
T TIGR00897 82 MIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYY 161 (402)
T ss_pred HHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988888765442 2 34666677788888888777667777788899999999999999999999986 589999
Q ss_pred HHHHHhhcchhHHHHHHH
Q 024637 217 AVGLVTSCHLRLAVILFE 234 (265)
Q Consensus 217 ~~~l~~~~~~~~~~~~~~ 234 (265)
.+++.+..|+...++...
T Consensus 162 ~~~l~~~~g~~~~~~~~~ 179 (402)
T TIGR00897 162 SSYAIPAFGEMNTLWSAL 179 (402)
T ss_pred HHhcccccchHHHHHHHH
Confidence 999888888654444333
No 71
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.72 E-value=2.8e-16 Score=127.95 Aligned_cols=167 Identities=19% Similarity=0.152 Sum_probs=142.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHH
Q 024637 68 WVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVS 147 (265)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~ 147 (265)
.+..+......+......|.+.++. +.+..+.++......++..++.++.|+++||+|||+.+.++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~ 73 (352)
T cd06174 5 FLGFFLSGLDRGLLSPALPLLAEDL-----------GLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLL 73 (352)
T ss_pred HHHHHHHHHhhhhhHhhHHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHH
Confidence 3444555566666677777777544 36777888999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchh
Q 024637 148 ACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLR 227 (265)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~ 227 (265)
..++.+.....++.+..++.+++.|++.+...+...++..|.+|+++|++..++.+....+|..++|.+.+.+.+..+|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 153 (352)
T cd06174 74 FALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWR 153 (352)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 99999888888888889999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 024637 228 LAVILFEVVFVLAIASSL 245 (265)
Q Consensus 228 ~~~~~~~~~~~i~~~~~~ 245 (265)
..+.+.+...++..+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~ 171 (352)
T cd06174 154 WLFLILAILGLLLALLLL 171 (352)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888777766665554443
No 72
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.72 E-value=5.2e-16 Score=132.23 Aligned_cols=171 Identities=12% Similarity=0.066 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhh-hchHH
Q 024637 61 IRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDK-IGRKL 139 (265)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~ 139 (265)
.+.++..+...++....+|++..+++.|..+.. +.+..+................+++|+++|| +|||+
T Consensus 20 p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~l----------g~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~ 89 (500)
T PRK09584 20 PKAFYLIFSIELWERFGYYGLQGIMAVYLVKQL----------GMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKR 89 (500)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHH
Confidence 345666777777788888999889998885433 4666666666555554445556789999999 59999
Q ss_pred HHHHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc--chhhHHHHHhhhhHHHHHHHHH
Q 024637 140 SMVLMFVSACIFLLPLVFHQ-SAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPA--RTTGFGVASSLGKVGGMVCPLV 216 (265)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~--r~~~~g~~~~~~~~g~~~~~~i 216 (265)
++.++.++.+++.+++.+.. +.+.+++.+++.+++.+...+...+++.|.+|++. |..++++.+...++|..++|.+
T Consensus 90 ~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i 169 (500)
T PRK09584 90 VIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLA 169 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHH
Confidence 99999999998887777653 44455566777888888888888899999998653 4567888899999999999999
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHHH
Q 024637 217 AVGLVTSCHLRLAVILFEVVFVLAI 241 (265)
Q Consensus 217 ~~~l~~~~~~~~~~~~~~~~~~i~~ 241 (265)
.+++.+..||+..|.+.++..+++.
T Consensus 170 ~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 170 TPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 9999999999999887765444443
No 73
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.72 E-value=1e-15 Score=126.62 Aligned_cols=154 Identities=13% Similarity=-0.030 Sum_probs=132.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHH
Q 024637 60 LIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 139 (265)
+.+..+..++..+...........++|.+.++. +.+..+.++..+...++..++.++.|+++||+|||+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-----------~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~ 72 (381)
T PRK03633 4 YTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQE-----------HLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNR 72 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 345566666666666777777778888888654 477789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHH
Q 024637 140 SMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
++..+.++.+++.+...+.++.+.+++.+++.|++.+...+.....+.+..|+++|+++++..+...++|..++|.+.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 152 (381)
T PRK03633 73 SYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSK 152 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999888888888889999999999999888888877777888888999999999999999999999999998
Q ss_pred HHhhc
Q 024637 220 LVTSC 224 (265)
Q Consensus 220 l~~~~ 224 (265)
+.+..
T Consensus 153 l~~~~ 157 (381)
T PRK03633 153 VSTEL 157 (381)
T ss_pred ccccc
Confidence 87653
No 74
>PRK15075 citrate-proton symporter; Provisional
Probab=99.72 E-value=1.2e-15 Score=128.16 Aligned_cols=151 Identities=17% Similarity=0.182 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHH
Q 024637 66 LLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMF 145 (265)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~ 145 (265)
..+...+.....++....|.|.|.++.. +.+..+.++...+..++.+++.++.|+++||+|||+++.++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~ 311 (434)
T PRK15075 242 AGMLMVAMTTVSFYLITVYTPTFGKTVL----------HLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFT 311 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 3334444455667778888999886543 466666677777888888999999999999999999887765
Q ss_pred HHHHHHHHH-Hh---hcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhh-HHHHHHHHHHHHH
Q 024637 146 VSACIFLLP-LV---FHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGK-VGGMVCPLVAVGL 220 (265)
Q Consensus 146 ~~~~~~~~~-~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~-~g~~~~~~i~~~l 220 (265)
++..+..+. .. ..++.........+.+++.+...+....+.+|.+|++.|+++.|+.+..+. +++.++|.+.|++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i 391 (434)
T PRK15075 312 VLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWL 391 (434)
T ss_pred HHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHH
Confidence 544332221 11 122332333334445566666666777889999999999999999877766 4688899999999
Q ss_pred Hhhcch
Q 024637 221 VTSCHL 226 (265)
Q Consensus 221 ~~~~~~ 226 (265)
.+..|+
T Consensus 392 ~~~~g~ 397 (434)
T PRK15075 392 IHVTGD 397 (434)
T ss_pred HHhcCC
Confidence 998885
No 75
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.72 E-value=7.8e-16 Score=127.74 Aligned_cols=151 Identities=9% Similarity=-0.030 Sum_probs=131.3
Q ss_pred HHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh
Q 024637 78 YYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF 157 (265)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 157 (265)
.+.....+|.+.++. +.+..+.++..+...++..++.++.|+++||+|||+++..+.++.+++.+...+
T Consensus 25 ~~~~~~~lp~i~~~~-----------~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~ 93 (393)
T PRK09705 25 LTSVGPLLPQLRQAS-----------GMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMREL 93 (393)
T ss_pred hhccchhHHHHHHHh-----------CCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 355667788777544 477888999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhc-chhHHHHHHHHH
Q 024637 158 HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSC-HLRLAVILFEVV 236 (265)
Q Consensus 158 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~-~~~~~~~~~~~~ 236 (265)
+++.+.+++.+++.|++.+...+....++.+.+| ++|+.++|+......+|..+++.+.+++.++. +|+..+.++++.
T Consensus 94 a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~ 172 (393)
T PRK09705 94 YPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALP 172 (393)
T ss_pred CcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 9999999999999999999988888899999997 67999999999999999999999999988875 788777666555
Q ss_pred HHHH
Q 024637 237 FVLA 240 (265)
Q Consensus 237 ~~i~ 240 (265)
.++.
T Consensus 173 ~~~~ 176 (393)
T PRK09705 173 AVVA 176 (393)
T ss_pred HHHH
Confidence 4433
No 76
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.71 E-value=4.7e-16 Score=128.65 Aligned_cols=181 Identities=13% Similarity=0.084 Sum_probs=122.2
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHH
Q 024637 51 SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAI 130 (265)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 130 (265)
+.++++++ +.++...+..+......+.+..+.|.+..+.. +.+..+.++......++.+++.++.|+
T Consensus 207 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~g~ 273 (399)
T TIGR00893 207 QIKELLKD---RRVWGLALGQFLVNIGLGFFLTWFPTYLVQER----------GLSILEAGFMASLPGIVGFIGMILGGR 273 (399)
T ss_pred chHHHhcC---HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh----------cccHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 34455543 33444444455556666677777888775443 456667778888888999999999999
Q ss_pred HHhhhchHH--HHHH------HHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHH
Q 024637 131 IVDKIGRKL--SMVL------MFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVA 202 (265)
Q Consensus 131 l~dr~grr~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~ 202 (265)
++||++||+ .... +.++..+..+.....++.+..+....+.+++. +..+....+.+|.+|++.|+++.|+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~ 352 (399)
T TIGR00893 274 LSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGL-GAGAIGWALISDNAPGNIAGLTGGLI 352 (399)
T ss_pred HHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhch-hhhhHHHHHHHhhcChhHHHHHHHHH
Confidence 999999996 1111 11111111111111223333333333333333 36788999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHh
Q 024637 203 SSLGKVGGMVCPLVAVGLVTSCH-LRLAVILFEVVFVLAIASSL 245 (265)
Q Consensus 203 ~~~~~~g~~~~~~i~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~ 245 (265)
+...++|+.++|.+.|++.+..| +...+.+.+++.+++.+..+
T Consensus 353 ~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 353 NSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888 77777777777666655544
No 77
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.71 E-value=4.6e-16 Score=131.37 Aligned_cols=158 Identities=12% Similarity=0.025 Sum_probs=128.1
Q ss_pred HHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhc
Q 024637 79 YGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH 158 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~ 158 (265)
+.+..+.|.+..+. +.+..+.++..+...++..++.++.|+++||+|||++++.+.++.+++.+++.+.
T Consensus 36 ~~~~~~~~~i~~~~-----------g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~ 104 (455)
T TIGR00892 36 KAVTVFFKELQQIF-----------QATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFS 104 (455)
T ss_pred cchhhhHHHHHHHh-----------CcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHh
Confidence 44566677766444 4677788888888888888999999999999999999999998888888888777
Q ss_pred chhHHHHHH-HHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 024637 159 QSAVVTTLL-LFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVF 237 (265)
Q Consensus 159 ~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 237 (265)
++.+.+++. +++.|++.+...+....++.+.+| +.|+++.|+.+....+|..++|.+.+.+.+..||+++|++.+++.
T Consensus 105 ~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~ 183 (455)
T TIGR00892 105 SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLL 183 (455)
T ss_pred hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 777766543 467788877666667778888886 679999999999999999999999999999999999999988877
Q ss_pred HHHHHHHhcCC
Q 024637 238 VLAIASSLLFP 248 (265)
Q Consensus 238 ~i~~~~~~~~~ 248 (265)
++..+..++..
T Consensus 184 ~~~~v~~~~~~ 194 (455)
T TIGR00892 184 LHCCVCGALMR 194 (455)
T ss_pred HHHHHHHHHhC
Confidence 66555444443
No 78
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.71 E-value=9.6e-16 Score=126.86 Aligned_cols=174 Identities=18% Similarity=0.229 Sum_probs=122.7
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHH
Q 024637 50 SSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSA 129 (265)
Q Consensus 50 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 129 (265)
.++++.++++ ++.++......+.....++....+.|.+.++.. +.+....+.......++..++.++.|
T Consensus 208 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g 276 (394)
T TIGR00883 208 GPIRETLTKH-RKPFLLGLGLVIATTTTFYLITTYLPTYLTQTL----------GLSANSALLVLMLSLILFFITIPLSG 276 (394)
T ss_pred CCHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555332 233444555555566667777778888874433 46666777778888889999999999
Q ss_pred HHHhhhchHHHHHHHHHHHHHHH-H-HHhh--cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhh
Q 024637 130 IIVDKIGRKLSMVLMFVSACIFL-L-PLVF--HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSL 205 (265)
Q Consensus 130 ~l~dr~grr~~~~~~~~~~~~~~-~-~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~ 205 (265)
+++||+|||+.+..+..+..+.. . .... ..+.+..+...++.+++.+...+...++++|.+|++.|+++.++.+..
T Consensus 277 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 356 (394)
T TIGR00883 277 ALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNL 356 (394)
T ss_pred HHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHh
Confidence 99999999998775554444332 1 1222 244555556667777788888899999999999999999999986555
Q ss_pred h-hHHHHHHHHHHHHHHhhcc-hhHHHHHHH
Q 024637 206 G-KVGGMVCPLVAVGLVTSCH-LRLAVILFE 234 (265)
Q Consensus 206 ~-~~g~~~~~~i~~~l~~~~~-~~~~~~~~~ 234 (265)
. .+|..++|.+.|++.+..| +....+...
T Consensus 357 ~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~ 387 (394)
T TIGR00883 357 AGAIFGGFAPYIAAALVAMTGDWYAIGYYLA 387 (394)
T ss_pred HHHHHhhHHHHHHHHHHHHcCcchhHHHHHH
Confidence 4 5788899999999999888 554444433
No 79
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.71 E-value=2e-16 Score=134.17 Aligned_cols=149 Identities=11% Similarity=0.009 Sum_probs=128.6
Q ss_pred cCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh--cchhHHHHHHHHHHHHHHhhhh
Q 024637 102 VDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF--HQSAVVTTLLLFGVRMCVTGTI 179 (265)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~ 179 (265)
+.+.+..+.++..+.+.++..++.++.|+++||+|||+++.++.++.+++.++..+ ..+.+.+++.+++.|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 34577788889999999999999999999999999999999998888887766544 3456678888999999999999
Q ss_pred hhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 180 TVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTS-CHLRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 180 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
+....+++|++|+++|+++.|+......+|.+++|.+.+++.+. .+|+..|.+.+++.++..++.+.+.++
T Consensus 150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999988 499999988888777666655555444
No 80
>PRK03699 putative transporter; Provisional
Probab=99.70 E-value=1e-15 Score=127.18 Aligned_cols=175 Identities=11% Similarity=0.094 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHH
Q 024637 63 TTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMV 142 (265)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 142 (265)
.++...+..+.....++.+..|.|.|.++.. +.+..+.+...+...++..++.++.|+++||++||+.+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~----------g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~ 275 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKF----------GMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILT 275 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHH
Confidence 3444444455555666778889999986544 467777788888888899999999999999999999988
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHh
Q 024637 143 LMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVT 222 (265)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~ 222 (265)
....+..+..+++...++.+...+..++.|++.+..++...++..+..|.+ ++...+.....+++|+.++|.+.|++.+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~ 354 (394)
T PRK03699 276 VLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVA 354 (394)
T ss_pred HHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 877777776666655666655666677778877777788788888877644 6788888888889999999999999999
Q ss_pred hcchhHHHHHHHHHHHHHHHHHhcCC
Q 024637 223 SCHLRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 223 ~~~~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
..|++..++..+++.+++.+.+....
T Consensus 355 ~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 355 HFGLQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred HhCchhhhhhhHHHHHHHHHHHHHHH
Confidence 99998888887777776665555444
No 81
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.70 E-value=1.3e-15 Score=125.62 Aligned_cols=171 Identities=13% Similarity=0.036 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHH-HHHHHH
Q 024637 71 FFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVL-MFVSAC 149 (265)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~-~~~~~~ 149 (265)
++............+|.+.++.. +.+..+.++..+...+...+..++.|+++||+|||+.+++ +.++..
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~ 75 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEEV----------RARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAA 75 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHccc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 44444555555556666654332 5777888999999889999999999999999999887654 555555
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhh--HHHHHhhhhHHHHHHHHHHHHHHhhcchh
Q 024637 150 IFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTG--FGVASSLGKVGGMVCPLVAVGLVTSCHLR 227 (265)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~--~g~~~~~~~~g~~~~~~i~~~l~~~~~~~ 227 (265)
++.++..+.++.+.+++.+++.+.+.+...+....+..|..|++.|+.+ .+......++|..++|.+.+++.+..+|+
T Consensus 76 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~ 155 (375)
T TIGR00899 76 LACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFT 155 (375)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccH
Confidence 6666667778887777777777766666677778888888887777654 57777778899999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccc
Q 024637 228 LAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 228 ~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
..+++.+++.++..+..++..||.
T Consensus 156 ~~f~~~~~~~~~~~~~~~~~~~~~ 179 (375)
T TIGR00899 156 VMFLTAALAFVLCGVLVWLFLPSY 179 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCc
Confidence 999888887776666665544453
No 82
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.70 E-value=1.1e-15 Score=126.78 Aligned_cols=142 Identities=13% Similarity=0.023 Sum_probs=114.1
Q ss_pred CCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhh
Q 024637 105 SKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATI 184 (265)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 184 (265)
.+....++..+.+.++..+..++.|+++||+|||+++.++.++.+++.+.+.+..+. ++.+++.|++.+...|...+
T Consensus 35 ~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a 111 (393)
T PRK11195 35 YPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYG 111 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 556677888899999999999999999999999999999999888877766554443 56678899999999999999
Q ss_pred hcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 185 YAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 185 ~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
+++|++|+++|+++.|+......+|..+||.++|++.+.. +...+.+.+...++..+.. +..||.
T Consensus 112 ~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~~~~~-~~l~~~ 176 (393)
T PRK11195 112 ILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLAALFN-LFIPRL 176 (393)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-hcCCCC
Confidence 9999999999999999999999999999999999998863 5555544444433333333 334443
No 83
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.70 E-value=8.7e-16 Score=108.45 Aligned_cols=134 Identities=16% Similarity=0.200 Sum_probs=117.6
Q ss_pred HHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcch
Q 024637 117 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPART 196 (265)
Q Consensus 117 ~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~ 196 (265)
..++..++.++.|++.||+|||+.+..+..+..++.+.....++.+...+..++.+++.+...+....++.|.+|++.|+
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 86 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERG 86 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhh
Confidence 35677889999999999999999999998888888887777778888888888999998888899999999999999999
Q ss_pred hhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 197 TGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 197 ~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
++.++.+....+|..++|.+.+.+.+..+++..+.+.+....+..+..+++.||
T Consensus 87 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 87 VALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999988888888888877777777776666654
No 84
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.70 E-value=2.4e-15 Score=124.84 Aligned_cols=176 Identities=11% Similarity=0.048 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHH
Q 024637 67 LWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFV 146 (265)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~ 146 (265)
..+..+.....+++...|.|.+..+. +.+..+.+....+..++.++++++.|++.||+|||+.+.++..
T Consensus 210 l~~~~~~~~~~~~~~~~~lp~~l~~~-----------g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~ 278 (393)
T PRK09705 210 LGVYFGLINGGYASLIAWLPAFYIEI-----------GASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALV 278 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc-----------CCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHH
Confidence 33344445566777888889888653 4677778888889999999999999999999999999888877
Q ss_pred HHHHHHHHHhh-cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccC-CCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhc
Q 024637 147 SACIFLLPLVF-HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYP-TPARTTGFGVASSLGKVGGMVCPLVAVGLVTSC 224 (265)
Q Consensus 147 ~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p-~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~ 224 (265)
+..++.+.+.. ..+.... ..++.+++.+...+.......+..+ ++.|++.+|+.+..+++++.++|.+.|++.+..
T Consensus 279 l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~ 356 (393)
T PRK09705 279 LQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSIS 356 (393)
T ss_pred HHHHHHHHHHHccchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77776655443 3222222 2345567777777777766667765 578999999999999999999999999999988
Q ss_pred c-hhHHHHHHHHHHHHHHHHHhcCCccccccc
Q 024637 225 H-LRLAVILFEVVFVLAIASSLLFPFETMGRE 255 (265)
Q Consensus 225 ~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 255 (265)
| +...+.+.++.+++..+..+.+.||++.+.
T Consensus 357 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 357 GNYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 7 444555555666666666667777776553
No 85
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.70 E-value=1.3e-15 Score=121.83 Aligned_cols=181 Identities=18% Similarity=0.123 Sum_probs=150.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhc
Q 024637 57 SRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIG 136 (265)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 136 (265)
|+..++.+++..+....+...++.+....+.+..+. +.++.+.+++..+..+.+.+.+++.|.+.||+|
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~-----------~LS~~q~~ll~aiPil~GallRl~~g~l~drfG 77 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDF-----------GLSEGQKGLLVAIPILVGALLRLPYGFLTDRFG 77 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc-----------CCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccC
Confidence 455667777777776666677776766666665333 699999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhc---chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHH
Q 024637 137 RKLSMVLMFVSACIFLLPLVFH---QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVC 213 (265)
Q Consensus 137 rr~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~ 213 (265)
.|++..++.++..+-++.+.+. ++.+.++++..+.|++ |+.+++...++++.||++++|.+.|+.. .+|+|..+.
T Consensus 78 gR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~ 155 (417)
T COG2223 78 GRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVA 155 (417)
T ss_pred chHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHH
Confidence 9999999999999988888773 3445788888888765 5667999999999999999999999999 999999999
Q ss_pred HHHHHHHHhhcc---hhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 214 PLVAVGLVTSCH---LRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 214 ~~i~~~l~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
.++.+.+....+ |+....++....++..+..++...+
T Consensus 156 q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 156 QLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999888 8888888888888877777766543
No 86
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.69 E-value=1e-15 Score=128.12 Aligned_cols=143 Identities=13% Similarity=0.112 Sum_probs=118.0
Q ss_pred CCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh-----cchhHHHHHHHHHHHHHHhhhh
Q 024637 105 SKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-----HQSAVVTTLLLFGVRMCVTGTI 179 (265)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~ 179 (265)
.+..+.++..+...++..+++++.|+++||+|||+++..+.++.+++.+.+.. .++.+.+++.+++.|++.+...
T Consensus 49 ~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~ 128 (417)
T PRK10489 49 GSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGV 128 (417)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 56678899999999999999999999999999999988877766665544321 4566777778888888887777
Q ss_pred hhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcC
Q 024637 180 TVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 247 (265)
Q Consensus 180 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 247 (265)
+....++.|.+|+++|+++.++.+...++|..+||.+++.+.+..+|++.+.+.++..++..+..+.+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (417)
T PRK10489 129 TALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRL 196 (417)
T ss_pred HHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC
Confidence 88889999999999999999999999999999999999999988888888877666666555554444
No 87
>PRK15075 citrate-proton symporter; Provisional
Probab=99.69 E-value=5.2e-15 Score=124.40 Aligned_cols=161 Identities=13% Similarity=0.109 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchH-HHHHHH-----HHhhhhHHHHHHHHHHhhhc
Q 024637 63 TTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSL-YVDVFI-----ASLAELPGLILSAIIVDKIG 136 (265)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~g~l~dr~g 136 (265)
.....++.++........+....|.+.++.+ .+..+. .+..+. ..+...++.++.|+++||+|
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~G 84 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFF-----------PAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVG 84 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhc
Confidence 4455556667777777777888888775543 333332 222211 12333568899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcchhH--------HHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhH
Q 024637 137 RKLSMVLMFVSACIFLLPLVFHQSAV--------VTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKV 208 (265)
Q Consensus 137 rr~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~ 208 (265)
||++++.+.++..++.+++.+.++.+ .+++.+++.|++.+...+....+++|++|+++|++++++.....++
T Consensus 85 rr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~ 164 (434)
T PRK15075 85 RRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQV 164 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHH
Confidence 99999999999999998888877755 3577889999999888888889999999999999999999988888
Q ss_pred HHHHHHHHHHHHH--------hhcchhHHHHHHH
Q 024637 209 GGMVCPLVAVGLV--------TSCHLRLAVILFE 234 (265)
Q Consensus 209 g~~~~~~i~~~l~--------~~~~~~~~~~~~~ 234 (265)
|..+++.+++.+. +..||+.+|++..
T Consensus 165 g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~ 198 (434)
T PRK15075 165 AVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGC 198 (434)
T ss_pred HHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHH
Confidence 8888887777653 4678888887643
No 88
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.69 E-value=1e-15 Score=126.01 Aligned_cols=136 Identities=20% Similarity=0.248 Sum_probs=111.6
Q ss_pred CCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcch--hHHHHHHHHHHHHHHhhhhhhh
Q 024637 105 SKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS--AVVTTLLLFGVRMCVTGTITVA 182 (265)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~ 182 (265)
.+....+....+..++.++++++.|++.||+|||+.+.++.++..++.+.+.+.++ ....+...++.+++.+...+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 316 (377)
T TIGR00890 237 LSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLF 316 (377)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhcc
Confidence 55566677788888999999999999999999999999888888888776665443 2233344556677777777778
Q ss_pred hhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 024637 183 TIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLA 240 (265)
Q Consensus 183 ~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~ 240 (265)
..+++|.+|+++|+++.|+.+....+|+.++|.+.|.+.+..|+...+.+.+++.+++
T Consensus 317 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 317 PSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 8899999999999999999999999999999999999999999888887777665554
No 89
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.69 E-value=6.1e-15 Score=122.46 Aligned_cols=160 Identities=11% Similarity=0.123 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHh
Q 024637 77 SYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV 156 (265)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 156 (265)
.++....+.|.+.++.. +.+..+.+.......++.+++.++.|+++||+|||+.+..+.+...+....+.
T Consensus 231 ~~~~~~~~~p~~l~~~~----------~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~ 300 (393)
T PRK15011 231 TNSLYIINMPLFIINEL----------HLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGML 300 (393)
T ss_pred HHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 34444556777764433 45656667766666677788999999999999999988776665555544444
Q ss_pred hcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 024637 157 FHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVV 236 (265)
Q Consensus 157 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~ 236 (265)
..++.+..++..++.+++.+...+....+..|.+|++ |+++.++.+...++|..++|.+.|.+.+..|+...+.+.+++
T Consensus 301 ~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~ 379 (393)
T PRK15011 301 MAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVM 379 (393)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4556665666666666666666666777788999864 999999999989999999999999999988988888777766
Q ss_pred HHHHHHHHhcC
Q 024637 237 FVLAIASSLLF 247 (265)
Q Consensus 237 ~~i~~~~~~~~ 247 (265)
.+++.+..++.
T Consensus 380 ~~~~~~~~~~~ 390 (393)
T PRK15011 380 IIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHhh
Confidence 66666665544
No 90
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.68 E-value=7.2e-15 Score=122.24 Aligned_cols=138 Identities=12% Similarity=0.057 Sum_probs=116.3
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 024637 111 YVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIY 190 (265)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~ 190 (265)
+.......++.+++.++.|++.||+|+|+.+..+..+.+++.+.+...++.+..++..++.|++.+..++.......|.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~ 331 (399)
T PRK05122 252 ALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRV 331 (399)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhC
Confidence 44556667788889999999999999999998888888887777766667777777778888888888887778888999
Q ss_pred CCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCC
Q 024637 191 PTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 191 p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
|++.|+++.|+.+...++|..++|.+.|++.+..|++..+...+++.+++.+..+++.
T Consensus 332 ~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 332 PPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999998888888877777776666554
No 91
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.68 E-value=5.2e-15 Score=120.49 Aligned_cols=171 Identities=22% Similarity=0.299 Sum_probs=144.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHH-HHHHH
Q 024637 66 LLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKL-SMVLM 144 (265)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~-~~~~~ 144 (265)
...+..+...........+.|.+.++.. +.+..+.+.......++..++.++.+++.||+|||+ .+..+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 248 (352)
T cd06174 179 LLALAFFLLSFGYYGLLTYLPLYLQEVL----------GLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIG 248 (352)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 3333444455555666677777775442 466677888888999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhc
Q 024637 145 FVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSC 224 (265)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~ 224 (265)
..+..++.+.....++.+...+..++.+++.+...+....+..|..|+++|++.+|+.+...++|..++|.+.+.+.+..
T Consensus 249 ~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~ 328 (352)
T cd06174 249 LLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG 328 (352)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999988888887777788888889999999999999999999999999999999999999999999999999999988
Q ss_pred chhHHHHHHHHHHHHHHHHHhc
Q 024637 225 HLRLAVILFEVVFVLAIASSLL 246 (265)
Q Consensus 225 ~~~~~~~~~~~~~~i~~~~~~~ 246 (265)
+++..+.+.+++.+++.+..++
T Consensus 329 ~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 329 GYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred CcchHHHHHHHHHHHHHHHhee
Confidence 9988888888888777766544
No 92
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.68 E-value=5.6e-15 Score=123.04 Aligned_cols=170 Identities=15% Similarity=0.043 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHH
Q 024637 64 TLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVL 143 (265)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~ 143 (265)
++.++..++...+.........|.+.++. +.+..+.++..+...++..+++++.|++.||+|||+++.+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~-----------~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~ 73 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAF-----------TLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILL 73 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHh-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 44455555555555555556677776444 4778889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh---cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHH
Q 024637 144 MFVSACIFLLPLVF---HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGL 220 (265)
Q Consensus 144 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l 220 (265)
+.++.+++.++... .++++.+++.+++.|++.+...+...+++.+..|++.|++..++.+.+.++|..++|.+.+.+
T Consensus 74 g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 74 GLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988877543 456788888899999999999999999999999999999999999999999999999999887
Q ss_pred Hhh--------------------------cchhHHHHHHHHHHHHHHHHH
Q 024637 221 VTS--------------------------CHLRLAVILFEVVFVLAIASS 244 (265)
Q Consensus 221 ~~~--------------------------~~~~~~~~~~~~~~~i~~~~~ 244 (265)
... .+|+.+++..+++.++..++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 154 ILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 532 357888887777666554444
No 93
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.68 E-value=1.8e-16 Score=125.46 Aligned_cols=149 Identities=17% Similarity=0.129 Sum_probs=138.8
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
+....++++++....+.+++.+++.|.+.||+|+|..++++..++..+.+++.+.++++..++.+.+.|++.+.......
T Consensus 102 ~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsgl 181 (464)
T KOG3764|consen 102 DRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGL 181 (464)
T ss_pred cccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhH
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccCCCc-chhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 184 IYAPEIYPTPA-RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 184 ~~~~e~~p~~~-r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
+++++.||.+. |++++|+.-.+..+|-.+||.++|.+.+..|...+|++.++++++...+-++..+.++
T Consensus 182 amlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~ 251 (464)
T KOG3764|consen 182 AMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTE 251 (464)
T ss_pred HHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccc
Confidence 99999999875 7999999999999999999999999999999999999999999988888777764433
No 94
>PRK09952 shikimate transporter; Provisional
Probab=99.68 E-value=1.7e-14 Score=121.37 Aligned_cols=136 Identities=17% Similarity=0.028 Sum_probs=108.9
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhH--------HHHHHHHHHHHHHhhhhhhhhhhcc
Q 024637 116 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAV--------VTTLLLFGVRMCVTGTITVATIYAP 187 (265)
Q Consensus 116 ~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~ 187 (265)
+..++..+++++.|+++||+|||+++.++.++.+++.++..+.++.. .+++.+++.|++.++.++....++.
T Consensus 72 ~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~ 151 (438)
T PRK09952 72 VGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAV 151 (438)
T ss_pred HHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHH
Confidence 34456678889999999999999999999999999999988887765 4778899999999999999999999
Q ss_pred cccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHh--------hcchhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 188 EIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVT--------SCHLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 188 e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
|.+|+++|+...+..+....+|..+++.+..++.. ..||+..|++.++..++. +......||++
T Consensus 152 e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~ 223 (438)
T PRK09952 152 ESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESA 223 (438)
T ss_pred HhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 99999999999998888888888888777766543 468988887766554443 22333344543
No 95
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.67 E-value=7.8e-20 Score=154.36 Aligned_cols=200 Identities=23% Similarity=0.387 Sum_probs=140.0
Q ss_pred ccccccccch-hHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHH
Q 024637 50 SSFFMLFSRK-LIRTTLLLWVLFFANVF-SYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLIL 127 (265)
Q Consensus 50 ~~~~~l~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (265)
.+++++++++ ++++++..+........ .++....+.+.+.++.+ .+.. .....+..+...++.++
T Consensus 239 ~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~-----------~~~~--~~~~~~~~~~~~~~~~~ 305 (451)
T PF00083_consen 239 ASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAG-----------ISNS--FLATLILGLVNFLGTLL 305 (451)
T ss_pred eeeeeccccccccccccccccccccccccccccccccccccccccc-----------cccc--ccccccccccccccccc
Confidence 5688888643 35555555555444333 33445556666664433 3222 23344445667778888
Q ss_pred HHHHHhhhchHHHHHHHHHHHHHHHHHHh--h---cch----hHHHHHHHHHHHHHHh-hhhhhhhhhcccccCCCcchh
Q 024637 128 SAIIVDKIGRKLSMVLMFVSACIFLLPLV--F---HQS----AVVTTLLLFGVRMCVT-GTITVATIYAPEIYPTPARTT 197 (265)
Q Consensus 128 ~g~l~dr~grr~~~~~~~~~~~~~~~~~~--~---~~~----~~~~~~~~~~~g~~~~-~~~~~~~~~~~e~~p~~~r~~ 197 (265)
+.++.||+|||++++.+..+++++.+.+. . ..+ ....++...+...+.+ +..+..+.+.+|++|++.|++
T Consensus 306 ~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~ 385 (451)
T PF00083_consen 306 AIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRST 385 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccc
Confidence 88999999999999999888888777664 1 221 1222222222222222 344777799999999999999
Q ss_pred hHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCccccccchhhhhhh
Q 024637 198 GFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRELKDTVDA 262 (265)
Q Consensus 198 ~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 262 (265)
+.|+....++++++++|.+.+.+.+..+....+.++++++++..++.+++.|||++++++|.+++
T Consensus 386 ~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 386 GIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred ccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 99999999999999999999988887775677788888888888888888899999999988764
No 96
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.67 E-value=8.3e-15 Score=121.19 Aligned_cols=177 Identities=8% Similarity=-0.103 Sum_probs=138.5
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHH
Q 024637 51 SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAI 130 (265)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 130 (265)
+++++++++..+.+ .+..+......+....+.|.+.++. +.+....+....+..++.+++.++.++
T Consensus 197 ~~~~~l~~~~~~~~---l~~~~l~~~~~~~~~~~~~~~l~~~-----------g~s~~~~g~l~~~~~~~~i~~~~~~~~ 262 (382)
T TIGR00902 197 AFIALLKNPMNLRF---LAAVCLIQGAHAAYYGFSAIYWQAA-----------GISASATGLLWGIGVLAEIIIFAFSNK 262 (382)
T ss_pred hHHHHHcChHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHC-----------CCCHhHHHHHHHHHHHHHHHHHHHhHH
Confidence 34556654333322 2333333344444555667777543 477788888888888999999999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHh-hhhHH
Q 024637 131 IVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASS-LGKVG 209 (265)
Q Consensus 131 l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~-~~~~g 209 (265)
+.||+|+|+.+.++.+...+..+.+.+.++.+.++...++.++..+...+....++.+. |++.|+++.++.+. ...+|
T Consensus 263 l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g 341 (382)
T TIGR00902 263 LFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGL 341 (382)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998888888888888889999999999999999999998 99999999999864 45599
Q ss_pred HHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 024637 210 GMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIAS 243 (265)
Q Consensus 210 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~ 243 (265)
.+++|.++|++.+..|. ..++..+++.+++.++
T Consensus 342 ~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 342 IAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 99999999999999885 5676777766655444
No 97
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.67 E-value=4.6e-17 Score=130.95 Aligned_cols=206 Identities=23% Similarity=0.284 Sum_probs=153.4
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCC-chHHHHHHHHHhhhhHHHHHHHHH
Q 024637 53 FMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKD-NSLYVDVFIASLAELPGLILSAII 131 (265)
Q Consensus 53 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l 131 (265)
..+|..++-+.++..+..||....++|+..++...+....+..+.+... ... ...-....+..++.++|..+...+
T Consensus 295 ~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~---~~~~~vA~~~~iia~~~~vPGyw~tv~~ 371 (538)
T KOG0252|consen 295 SRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTY---HELFKVAEGNLIIAVCSTVPGYWFTVYF 371 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchH---HHHHHHHHHHHHHHHHccCCceeEEEEE
Confidence 3344334668888889999999999999999999888654421110000 000 011122333445666788889999
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHHhhcch-----hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhh
Q 024637 132 VDKIGRKLSMVLMFVSACIFLLPLVFHQS-----AVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLG 206 (265)
Q Consensus 132 ~dr~grr~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~ 206 (265)
+|++|||++.+.+++++.+..+.+....+ ....+...+...++.-+..+....+.+|.||++.|+++.|+....+
T Consensus 372 id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~G 451 (538)
T KOG0252|consen 372 IDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASG 451 (538)
T ss_pred eehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhc
Confidence 99999999999999999999988887443 1122222333334555666788899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHh-----hcchhHHHHHHHHHHHHHHHHHhcCCccccccchhhhhhh
Q 024637 207 KVGGMVCPLVAVGLVT-----SCHLRLAVILFEVVFVLAIASSLLFPFETMGRELKDTVDA 262 (265)
Q Consensus 207 ~~g~~~~~~i~~~l~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 262 (265)
..|++++.....++.+ ..+....+++++++++++.+..++++ |++++.+++..++
T Consensus 452 K~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~p-Etk~~~leei~~e 511 (538)
T KOG0252|consen 452 KAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIP-ETKGKSLEEISNE 511 (538)
T ss_pred cchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEee-cccccCHHHhcCh
Confidence 9999999999999998 77888999999999998888877776 9999998876443
No 98
>PRK03545 putative arabinose transporter; Provisional
Probab=99.67 E-value=8.5e-15 Score=121.48 Aligned_cols=143 Identities=13% Similarity=0.044 Sum_probs=110.9
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH-HHhhcchhHHHHHHHHHHHHHHhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLL-PLVFHQSAVVTTLLLFGVRMCVTGTITVA 182 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 182 (265)
+.+....+.......++.++++++.|+++||++||.+.. +..+..++.. .....++.+..++..++.|++.....+..
T Consensus 237 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 315 (390)
T PRK03545 237 GLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAM 315 (390)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHH
Confidence 466677788888888999999999999999999887544 4444444433 33345566666667777777766655666
Q ss_pred hhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCC
Q 024637 183 TIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 183 ~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
...+.+..| +.|++++|+.+...++|..+||.+.|++.+..|++..+...+.+.+++.+..+...
T Consensus 316 ~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 316 QVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 677778776 57899999999999999999999999999999999888888888777777766555
No 99
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.67 E-value=8e-15 Score=122.10 Aligned_cols=170 Identities=15% Similarity=0.179 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHH-H
Q 024637 65 LLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMV-L 143 (265)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~-~ 143 (265)
+...+..++....++++..+.|.+.++. +.+..+.+.......++..+++++.|+++||+|||+.+. .
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----------g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~ 293 (402)
T TIGR00897 225 LLGGMVRIINTIGLFGFAVFLPMFVAEL-----------GFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWF 293 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Confidence 3333444555666777888889888553 366666677777788899999999999999999888764 3
Q ss_pred HHHHHHHHHHHHhh-----cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHH
Q 024637 144 MFVSACIFLLPLVF-----HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAV 218 (265)
Q Consensus 144 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~ 218 (265)
+.+..+++.+.+.. .++.+..++..++.|++.+...+ ......|..| ++|++++|+.+....+|+.++|.+.+
T Consensus 294 ~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g 371 (402)
T TIGR00897 294 GGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAV 371 (402)
T ss_pred HHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333222221 23455555666677777666544 3455667655 57999999999999999999999999
Q ss_pred HHHhhcchhHHHHHHHHHHHHHHHHHhcC
Q 024637 219 GLVTSCHLRLAVILFEVVFVLAIASSLLF 247 (265)
Q Consensus 219 ~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 247 (265)
.+.+..|+...+++.+++.+++.++..+.
T Consensus 372 ~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 372 LFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999888888888777777666554
No 100
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.66 E-value=8.4e-15 Score=123.14 Aligned_cols=178 Identities=15% Similarity=0.215 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchH--
Q 024637 61 IRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRK-- 138 (265)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr-- 138 (265)
.+.+...++.++...-+..++......|.++.. +.+..+......+..+.+++|++++|++.||+|.|
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~l----------g~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~ 349 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVL----------GMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK 349 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh
Confidence 355555555666555566666656666664333 68888888888889999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHhh--------cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHH
Q 024637 139 LSMVLMFVSACIFLLPLVF--------HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGG 210 (265)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~ 210 (265)
+++.++.++..+..+...+ ..+.+.++++.++.|++.|+.++..-++.+|+.|+++.+..+|+....+...+
T Consensus 350 ~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss 429 (477)
T PF11700_consen 350 RTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASS 429 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHH
Confidence 7877777666444443333 56778888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHhcCC
Q 024637 211 MVCPLVAVGLVTSCH-LRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 211 ~~~~~i~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
++||++.|.+.+..| .+..+....++.+++.++.++..
T Consensus 430 ~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 430 WLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred HHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999887 55666666666666666665544
No 101
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.66 E-value=1.7e-14 Score=118.88 Aligned_cols=143 Identities=16% Similarity=0.196 Sum_probs=113.2
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
+.+..+.+...........++.++.|++.||+|||+.+.++.++..+..+.....++.+..++..++.+++.+...+...
T Consensus 231 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 310 (375)
T TIGR00899 231 GLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGM 310 (375)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35556666666666666778889999999999999998887776666655555556666666677777888887778888
Q ss_pred hhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcC
Q 024637 184 IYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 247 (265)
Q Consensus 184 ~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 247 (265)
.+..|..|++ ++++.++.+...++|..++|.+.|.+.+..|++..+.+.+++.+++.++..+.
T Consensus 311 ~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 311 LYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence 8899998875 67999999999999999999999999999898888888777777766665443
No 102
>TIGR00895 2A0115 benzoate transport.
Probab=99.66 E-value=3.7e-15 Score=123.57 Aligned_cols=155 Identities=25% Similarity=0.316 Sum_probs=116.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhh
Q 024637 55 LFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDK 134 (265)
Q Consensus 55 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr 134 (265)
+++++..+..+..++..+.....++....+.|.+..+. +.+....+.......++.+++.++.|+++||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (398)
T TIGR00895 243 LFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVEL-----------GFSLSLAATGGALFNFGGVIGSIIFGWLADR 311 (398)
T ss_pred HhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44444455555555555556666677777888666443 3666677888888889999999999999999
Q ss_pred hchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHH
Q 024637 135 IGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCP 214 (265)
Q Consensus 135 ~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~ 214 (265)
+|||+......+......++.....+.+..++..++.+++.+...+...+++.|.+|++.|+++.|+.+.+..+|..++|
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~ 391 (398)
T TIGR00895 312 LGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGP 391 (398)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99995544443333333333322455666677778888999989999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 024637 215 LVAVGL 220 (265)
Q Consensus 215 ~i~~~l 220 (265)
.+.|++
T Consensus 392 ~~~G~l 397 (398)
T TIGR00895 392 ILAGYL 397 (398)
T ss_pred HhHHhc
Confidence 999875
No 103
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.65 E-value=6.9e-15 Score=122.35 Aligned_cols=146 Identities=20% Similarity=0.284 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q 024637 74 NVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLL 153 (265)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~ 153 (265)
..........+.|.+..+.. +.+..+.+.......++.+++.++.|++.||+|||+.+.++.++..+..+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~----------g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 319 (405)
T TIGR00891 250 ANLYSHPIQDLLPTYLKADL----------GLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLII 319 (405)
T ss_pred HHHHHhhhhhhhHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHH
Confidence 33444455556677664332 46667778888888899999999999999999999998887776544333
Q ss_pred H-HhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcc-hhHH
Q 024637 154 P-LVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-LRLA 229 (265)
Q Consensus 154 ~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~-~~~~ 229 (265)
. .....+.+...+..++.+++.++..+....+++|.+|++.|++++|+.+...++|+.++|.+.|++.+..| +...
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~ 397 (405)
T TIGR00891 320 PVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTA 397 (405)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchh
Confidence 2 22344445455554566666666677888899999999999999999999999999999999999999988 4433
No 104
>TIGR00898 2A0119 cation transport protein.
Probab=99.65 E-value=2.8e-15 Score=128.49 Aligned_cols=141 Identities=18% Similarity=0.142 Sum_probs=123.4
Q ss_pred CchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhc
Q 024637 107 DNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYA 186 (265)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 186 (265)
..+.++..++..++.+++.++.|+++||+|||+++.++.++.+++.++..+.++.+.+++.+++.|++.+...+....++
T Consensus 126 ~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~ 205 (505)
T TIGR00898 126 AWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLN 205 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHh
Confidence 56778899999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred ccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 187 PEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 187 ~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
.|.+|++.|+.+.++......+|.+++|.+++.+.+ |++.+++.++..++..+..++ .||+
T Consensus 206 ~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~~-~~es 266 (505)
T TIGR00898 206 TEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSWF-VPES 266 (505)
T ss_pred heecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHh-cCCC
Confidence 999999999999999988888999999988776653 788888777776666655544 4564
No 105
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.65 E-value=8.7e-15 Score=120.08 Aligned_cols=175 Identities=15% Similarity=0.153 Sum_probs=118.8
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHH
Q 024637 52 FFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAII 131 (265)
Q Consensus 52 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 131 (265)
+++++++ +.++.....+++....+|++..|+|.++++.+ .+.. .+....+..+ .+.+..+++
T Consensus 185 ~~~ll~~---~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g-----------~s~~-~~~~~~l~~~---~g~~g~~~~ 246 (368)
T TIGR00903 185 FGALAGR---KDLWIIGAILGFGVALFDNLAIWLEAALRPAG-----------LEDI-AGDAVALAIL---AGLIGVAVI 246 (368)
T ss_pred HHHHHcC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------CChH-HHHHHHHHHH---HHHHHHHHh
Confidence 5566654 33455556677778888899999999996543 3322 3334443333 344445778
Q ss_pred Hhhhch---HHHHH-HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhh
Q 024637 132 VDKIGR---KLSMV-LMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGK 207 (265)
Q Consensus 132 ~dr~gr---r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ 207 (265)
+||..| |+... ...++.++....+....+.+..++..++.+++....++..+++.+|.+|++.|+++.|+.+..++
T Consensus 247 ~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~ 326 (368)
T TIGR00903 247 PDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSR 326 (368)
T ss_pred hHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHH
Confidence 887654 33333 23344444444444444444445555666777777778888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhc
Q 024637 208 VGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLL 246 (265)
Q Consensus 208 ~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 246 (265)
+|++.+|.+.+.+.. +....|..+++..+++++..++
T Consensus 327 ~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~~ 363 (368)
T TIGR00903 327 AISVALALAAMLFIS--SAEAYFTFLAILITIAFAIALL 363 (368)
T ss_pred HHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999988773 6667777777777777776653
No 106
>PRK10133 L-fucose transporter; Provisional
Probab=99.65 E-value=4e-14 Score=118.95 Aligned_cols=151 Identities=13% Similarity=0.067 Sum_probs=127.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHH
Q 024637 60 LIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 139 (265)
+...+....++++...+.........|.+.++. +.+..+.++..+...++..++.++.|++.||+|||+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~-----------~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~ 92 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAF-----------TLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKA 92 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 445566666666777777777788888875433 477889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH---hhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHH
Q 024637 140 SMVLMFVSACIFLLPL---VFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLV 216 (265)
Q Consensus 140 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i 216 (265)
++.++.++..++.+++ ...++.+.+++.+++.|++.+...+....++.|..|.+.|...+++.+....+|..++|.+
T Consensus 93 ~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~ 172 (438)
T PRK10133 93 GIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVF 172 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988765 3477888899999999999999999999999998777777778999999999999999988
Q ss_pred HHHHH
Q 024637 217 AVGLV 221 (265)
Q Consensus 217 ~~~l~ 221 (265)
++.+.
T Consensus 173 g~~l~ 177 (438)
T PRK10133 173 GQSLI 177 (438)
T ss_pred HHHHH
Confidence 87654
No 107
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.64 E-value=2.7e-14 Score=117.36 Aligned_cols=157 Identities=13% Similarity=0.095 Sum_probs=130.7
Q ss_pred HHHHHHHHHhhcCCCCCCCcccccCCCCCch-HHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh
Q 024637 79 YGAVLLTSKLSSGDSKCGSKVLHVDKSKDNS-LYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF 157 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 157 (265)
....+..|.+..+. +.+..+ .+.+......+..+..+++|+++||+|.|+++.++.+..++..++..+
T Consensus 43 ~n~s~a~p~L~~el-----------glT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~f 111 (511)
T TIGR00806 43 PGESFITPYLLTVL-----------NFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLL 111 (511)
T ss_pred chHHHHHHHHHHHc-----------CCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 34444566555433 477777 889999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHH---HH
Q 024637 158 HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVIL---FE 234 (265)
Q Consensus 158 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~---~~ 234 (265)
..+...+.+.+++.|++-+..+ ....++..++|+++|+++.|+......+|.++++.+.++ +..+||+....+ ..
T Consensus 112 a~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl 189 (511)
T TIGR00806 112 GTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISL 189 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHH
Confidence 9899999999999999999998 999999999999999999999999999999999999999 556687654332 22
Q ss_pred HHHHHHHHHHhcCC
Q 024637 235 VVFVLAIASSLLFP 248 (265)
Q Consensus 235 ~~~~i~~~~~~~~~ 248 (265)
....++.++.++++
T Consensus 190 ~s~~~a~~~a~~LP 203 (511)
T TIGR00806 190 VFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHHHHhCC
Confidence 33345555555655
No 108
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.64 E-value=5.8e-15 Score=124.27 Aligned_cols=174 Identities=14% Similarity=0.128 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHH
Q 024637 69 VLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSA 148 (265)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~ 148 (265)
+..+......+++..|.|.+.++.. +.+....++...+..++.+++.++.|+++||+++++....+....
T Consensus 258 ~~~~~~~~~~~~~~~~~p~~l~~~~----------g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~ 327 (438)
T TIGR00712 258 IANVFVYLLRYGVLDWSPTYLKEVK----------HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFM 327 (438)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHcc----------CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHH
Confidence 3333444556677788899886543 466677788888888899999999999999996433222222221
Q ss_pred ---HHHHHHHhh--cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHH-HHHHHHHHHHHh
Q 024637 149 ---CIFLLPLVF--HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGG-MVCPLVAVGLVT 222 (265)
Q Consensus 149 ---~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~-~~~~~i~~~l~~ 222 (265)
.++.+.+.. ..+.+...+..++.+++..+..........|.+|++.|+++.|+.+...++|+ +++|.+.|.+.+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~ 407 (438)
T TIGR00712 328 TLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD 407 (438)
T ss_pred HHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHH
Confidence 112222112 22333333333444443323223334567799999999999999999988775 689999999999
Q ss_pred hcchhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 223 SCHLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 223 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
..|+...+.+..++.+++.+..+++.+|.|
T Consensus 408 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 408 FFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 989888888888777777777777776654
No 109
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.63 E-value=1.6e-14 Score=123.50 Aligned_cols=148 Identities=17% Similarity=0.264 Sum_probs=110.5
Q ss_pred HHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhc-
Q 024637 80 GAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH- 158 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~- 158 (265)
....++|.+.++.. +.+..+.+...+...++.+++.++.|+++||+|||+++.++.++..+..+.+...
T Consensus 293 ~~~~~lp~~l~~~~----------g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 362 (496)
T PRK03893 293 PIQALLPTYLKTDL----------GYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIG 362 (496)
T ss_pred hHHHHHHHHHHhhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc
Confidence 35567888875332 4677788888899999999999999999999999999888777666655443332
Q ss_pred -chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 024637 159 -QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVF 237 (265)
Q Consensus 159 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 237 (265)
.+.+......++.++...+..+....+++|.+|++.|++++|+.+....+|+.++|.+.|.+.+..|+...+...+...
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 363 GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSL 442 (496)
T ss_pred ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHH
Confidence 2333333333333333333456677888999999999999999999999999999999999999988877765555443
No 110
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.63 E-value=1e-14 Score=121.67 Aligned_cols=138 Identities=14% Similarity=0.165 Sum_probs=116.0
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 024637 111 YVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIY 190 (265)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~ 190 (265)
+....+..++.+++.+..|+++||+|||+.+..+.++.+++.+...+.++.+..++..++.|++.+...+...+.+.+..
T Consensus 261 g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 340 (408)
T PRK09874 261 GMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNS 340 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhC
Confidence 34445556777888899999999999999999888888777776666667777777778888888888888888888999
Q ss_pred CCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCC
Q 024637 191 PTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 191 p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
|++.|++.+++.+....+|..++|.+.|.+.+..|+...+.+.+++.+++.+..++..
T Consensus 341 ~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 341 SNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred CcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999899888888877777665544
No 111
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.63 E-value=6.2e-15 Score=126.80 Aligned_cols=145 Identities=18% Similarity=0.201 Sum_probs=127.7
Q ss_pred CCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhh
Q 024637 105 SKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATI 184 (265)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 184 (265)
.+.....+..++..++..+|++++|.++||+|||++++++.++..++.++.+++++.+.+++++++.|++.++...+.+.
T Consensus 115 ~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~ 194 (521)
T KOG0255|consen 115 DSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFG 194 (521)
T ss_pred CcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHh
Confidence 44456677888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCccccc
Q 024637 185 YAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 253 (265)
Q Consensus 185 ~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 253 (265)
+.+|+++++.|+.+..+ ......++.++|...+++.. +|++.+++..+..++..++ +++++|+++
T Consensus 195 ~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~r 259 (521)
T KOG0255|consen 195 LVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPR 259 (521)
T ss_pred hheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChH
Confidence 99999999999999999 88888888899988888877 7888887777777666555 555557654
No 112
>PRK12382 putative transporter; Provisional
Probab=99.63 E-value=4.3e-14 Score=117.34 Aligned_cols=139 Identities=16% Similarity=0.025 Sum_probs=116.9
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 024637 110 LYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEI 189 (265)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~ 189 (265)
.+.......++.+++.++.|++.||+|+|+.+..+..+.+++.+.+...++.+..++..++.+++.+...+.......|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 330 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKR 330 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 34455566677888999999999999999999888888888877776666766667777788888887778888888999
Q ss_pred cCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCC
Q 024637 190 YPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 190 ~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
+|++.|+++.|+.+....+|..++|.+.|++.+..|+...+.+.+++.+++.++.++..
T Consensus 331 ~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 331 VPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999888888887777776665543
No 113
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.63 E-value=6.6e-15 Score=116.05 Aligned_cols=117 Identities=13% Similarity=0.099 Sum_probs=105.4
Q ss_pred CCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhh
Q 024637 105 SKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATI 184 (265)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 184 (265)
.+..-.+.+.+.+++..++.++.+|.++||+|||++++++....++..++.+.+.+...++..+++.|++.|- .++..+
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgn-l~v~rA 143 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGN-LSVIRA 143 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hHHHHH
Confidence 3445678888899999999999999999999999999999999999998888888886666669999877654 488999
Q ss_pred hcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHh
Q 024637 185 YAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVT 222 (265)
Q Consensus 185 ~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~ 222 (265)
+++|+++++.|+.+++.......+|-++||.++|++..
T Consensus 144 iisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 144 IISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 99999999999999999999999999999999999987
No 114
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.62 E-value=5.7e-14 Score=116.17 Aligned_cols=154 Identities=15% Similarity=0.050 Sum_probs=115.3
Q ss_pred HHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcc
Q 024637 80 GAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ 159 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 159 (265)
....++|.+.++. +.+....+.......++.+++.++.|++.||+|+|+++..+..+.+++.+... .
T Consensus 218 ~~~~~lp~~~~~~-----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~ 284 (381)
T PRK03633 218 SLYGLMPLYLNHQ-----------GMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S 284 (381)
T ss_pred HHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h
Confidence 3344577777543 36666777778888889999999999999999999998888777777655443 1
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 024637 160 SAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVL 239 (265)
Q Consensus 160 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i 239 (265)
. ...+...++.+++.....+....++.|..|++.++...+..+...++|+.++|.+.|++.+..++...|...+.+.++
T Consensus 285 ~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~ 363 (381)
T PRK03633 285 Q-AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFI 363 (381)
T ss_pred h-HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHH
Confidence 1 222334445555555667888888899999888888888888888899999999999999999988888887777765
Q ss_pred HHHHHhcC
Q 024637 240 AIASSLLF 247 (265)
Q Consensus 240 ~~~~~~~~ 247 (265)
..+..++.
T Consensus 364 ~~~~~~~~ 371 (381)
T PRK03633 364 YLLMLLRK 371 (381)
T ss_pred HHHHHHhc
Confidence 55444433
No 115
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.62 E-value=2.7e-14 Score=121.37 Aligned_cols=172 Identities=10% Similarity=0.017 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchH------
Q 024637 65 LLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRK------ 138 (265)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr------ 138 (265)
+...+.++......+.+..+.|.+..+.. +.+..+.+...++..++.+++++++|+++||++||
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~----------g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r 324 (476)
T PLN00028 255 WILALTYGYSFGVELTMDNIIAEYFYDRF----------GLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGR 324 (476)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchh
Confidence 33333344444445556667787764433 46777788888888999999999999999999875
Q ss_pred -HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHH
Q 024637 139 -LSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVA 217 (265)
Q Consensus 139 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~ 217 (265)
....+..++.++..+.+....+.+..++..++.+++.+...+..+++.+++.| +.||++.|+.+..+++|++++|.+.
T Consensus 325 ~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~ 403 (476)
T PLN00028 325 LWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLF 403 (476)
T ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHH
Confidence 23333333333434444444455555555566666666666777788888765 6899999999888778888887765
Q ss_pred HHHHhhcchhHHHHHHHHHHHHHHHHHhcCC
Q 024637 218 VGLVTSCHLRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 218 ~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
+ ..+..++...+++.+++.++++++.++..
T Consensus 404 ~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 404 F-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred H-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 4 11233577788888777777766665553
No 116
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.62 E-value=4e-15 Score=129.77 Aligned_cols=145 Identities=12% Similarity=0.052 Sum_probs=122.0
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcc------------------------
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ------------------------ 159 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~------------------------ 159 (265)
+.+..+.+++.+.+.++..++.++.+++.||.|||+.+.++.++++++.++.++.+
T Consensus 64 ~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~ 143 (633)
T TIGR00805 64 KLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSF 143 (633)
T ss_pred CCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccc
Confidence 47778889999999999999999999999999999999999999999888776531
Q ss_pred ---------------------------hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHH
Q 024637 160 ---------------------------SAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMV 212 (265)
Q Consensus 160 ---------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~ 212 (265)
....+++.+++.|++.+..++...+++.|.+|++.|+...|+.+....+|..+
T Consensus 144 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~l 223 (633)
T TIGR00805 144 LCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAF 223 (633)
T ss_pred cccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHH
Confidence 13456688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhc----------------------chhHHHHHHHHHHHHHHHHHhcCC
Q 024637 213 CPLVAVGLVTSC----------------------HLRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 213 ~~~i~~~l~~~~----------------------~~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
|+.+++++.+.+ +|+..|++.+++.++.++..++++
T Consensus 224 G~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 224 GYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFP 281 (633)
T ss_pred HHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 999999988643 155667777777666665555554
No 117
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.62 E-value=5e-14 Score=131.64 Aligned_cols=139 Identities=11% Similarity=-0.006 Sum_probs=108.1
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHH---HHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhh
Q 024637 109 SLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFV---SACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIY 185 (265)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 185 (265)
..++..+++.+..++.++++|+++||+|||+++..... +.++..+......+.+.+++++++.|++.+...+...++
T Consensus 53 ~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~ 132 (1140)
T PRK06814 53 LVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSI 132 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHh
Confidence 45666777788889999999999999999997543222 222222222234788899999999999999999999999
Q ss_pred cccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcC
Q 024637 186 APEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 247 (265)
Q Consensus 186 ~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 247 (265)
+.+++|++.|+.++|+.++...+|.++||.++|++.+..+|+..+...++..++..++.+++
T Consensus 133 l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1140)
T PRK06814 133 LPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFI 194 (1140)
T ss_pred hHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999888877733333334444433433
No 118
>PTZ00207 hypothetical protein; Provisional
Probab=99.62 E-value=9.7e-14 Score=118.67 Aligned_cols=160 Identities=11% Similarity=0.067 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q 024637 74 NVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLL 153 (265)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~ 153 (265)
.....|++..+.|.+..+. +.+..+.++...+... .....++.|++.||+|+|+++.++.++.+++.+
T Consensus 39 ~~g~~y~fsv~s~~L~~~l-----------gls~~~l~~i~svg~~-~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~l 106 (591)
T PTZ00207 39 CTSFMYAFNLISGAMQARY-----------NLTQRDLSTITTVGIA-VGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTL 106 (591)
T ss_pred HHHHHHHHHHHHHHHHHHh-----------CcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 3445677777888776444 3666676766655332 334566789999999999999999999999998
Q ss_pred HHhhc------chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHH-HHHHHHHHhhcch
Q 024637 154 PLVFH------QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVC-PLVAVGLVTSCHL 226 (265)
Q Consensus 154 ~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~-~~i~~~l~~~~~~ 226 (265)
+..++ .+.+.+.+.+++.|++.+...+.....+.++|| +.||.+.|+......+|+++. ++..+++. .++
T Consensus 107 l~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~ 183 (591)
T PTZ00207 107 LFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNT 183 (591)
T ss_pred HHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhH
Confidence 88775 577888888999999988888888888899997 679999999999999998764 44444443 246
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC
Q 024637 227 RLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 227 ~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
...+++.+++.++..++.+++.
T Consensus 184 ~~~fl~l~vl~~vv~ll~~~~v 205 (591)
T PTZ00207 184 SAYFFFLMSFALVVGILAIVFM 205 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhhe
Confidence 6677777777666555555444
No 119
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.61 E-value=7.7e-14 Score=116.01 Aligned_cols=141 Identities=11% Similarity=0.098 Sum_probs=114.4
Q ss_pred CCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhh
Q 024637 106 KDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIY 185 (265)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 185 (265)
+....+...++..+...++.+..|++.||+|||+.+.++.++.++........++.+..++..++.+++..........+
T Consensus 252 ~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 331 (396)
T TIGR00882 252 GTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKY 331 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455677777778888899999999999999999999888888877776667777777777777877776666667778
Q ss_pred cccccCCCcchhhHHH-HHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhc
Q 024637 186 APEIYPTPARTTGFGV-ASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLL 246 (265)
Q Consensus 186 ~~e~~p~~~r~~~~g~-~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 246 (265)
..+..|++.++++.+. .+....+|++++|.+.|++.+..|+...+.+.+++.++..+...+
T Consensus 332 ~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 332 ITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999888877 467778999999999999999999988998888887776665443
No 120
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.61 E-value=1.5e-14 Score=115.77 Aligned_cols=177 Identities=18% Similarity=0.191 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHH
Q 024637 61 IRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLS 140 (265)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 140 (265)
.+.++.+++.++.....+-++..++|.|.++++ +.+..+.+.......+.+.+.++++|+++||+|.+++
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~f----------g~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv 286 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQF----------GLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRV 286 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhH
Confidence 356667777777777888889999999998776 6777787888888888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhc-------chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHH
Q 024637 141 MVLMFVSACIFLLPLVFH-------QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVC 213 (265)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~ 213 (265)
+++....++++....... .+.+..+...+..+++.+......+.+++..+|. +-|.+.|+....+++|++.-
T Consensus 287 ~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~l 365 (417)
T COG2223 287 TLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFL 365 (417)
T ss_pred HHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccch
Confidence 999999988888777763 3455555556666777788888899999999987 47899999999999999999
Q ss_pred HHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHhcCC
Q 024637 214 PLVAVGLVTSCH-LRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 214 ~~i~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
|...+...+..| +...|.++....+++.+..+...
T Consensus 366 p~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 366 PLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred hHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988 56677777777777777666554
No 121
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.61 E-value=3.1e-14 Score=120.79 Aligned_cols=184 Identities=13% Similarity=0.151 Sum_probs=121.7
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHH
Q 024637 51 SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAI 130 (265)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 130 (265)
++++++++ +.++...+..++....++.+..|+|.|..+.. +.+..+.++...+..++..++.++.|+
T Consensus 253 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~----------g~s~~~~g~~~~~~~~~~~i~~~~~g~ 319 (465)
T TIGR00894 253 PIKAIPKS---LPVWAIWFAIFGHFWLYTILPTYLPTFISWVL----------RVSGKENGLLSSLPYLFAWLCSIFAGY 319 (465)
T ss_pred CHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CcChHHhHHHHHHHHHHHHHHHHHHHH
Confidence 45565543 34555566667777778888889999986543 466777788888888999999999999
Q ss_pred HHhhhchHHH--------HHHHHH--HHHHHHHHHhh-cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhH
Q 024637 131 IVDKIGRKLS--------MVLMFV--SACIFLLPLVF-HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGF 199 (265)
Q Consensus 131 l~dr~grr~~--------~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~ 199 (265)
++||+++|+. +..+.. +.++..+.... ..+.+..++...+.+.+.+...+.......|..|. .+|.+.
T Consensus 320 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ 398 (465)
T TIGR00894 320 LADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIK 398 (465)
T ss_pred HHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHH
Confidence 9999865421 111111 11111212222 23333344444455555555555555666677776 799999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHhhc---chhHHHHHHHHHHHHHHHHHhcCC
Q 024637 200 GVASSLGKVGGMVCPLVAVGLVTSC---HLRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 200 g~~~~~~~~g~~~~~~i~~~l~~~~---~~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
|+.+..+.+|+.++|.+.|++.+.. +|...+.+.++..+++.++..+..
T Consensus 399 g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 399 GITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred HHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 9999999999999999999887653 366677777777777666555443
No 122
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.61 E-value=5.4e-14 Score=118.38 Aligned_cols=119 Identities=15% Similarity=0.108 Sum_probs=97.5
Q ss_pred chHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhc-chhHHHHHHHHHHHHHHhhhhhhhhhhc
Q 024637 108 NSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH-QSAVVTTLLLFGVRMCVTGTITVATIYA 186 (265)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 186 (265)
...+....+..++.+++.++.++++||+|+|+++.++.++.+++.+.+.+. .+.+..++..++.+++.+...+..++++
T Consensus 257 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 336 (437)
T TIGR00792 257 ELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALV 336 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556666788889999999999999999999999888888777666554 3445556666778888888888899999
Q ss_pred ccccC-------CCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcch
Q 024637 187 PEIYP-------TPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHL 226 (265)
Q Consensus 187 ~e~~p-------~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~ 226 (265)
+|..| ++.+|...|+.+.+..+|..+++.+.|++.+..|+
T Consensus 337 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 337 ADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred hhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88865 55689999999999999999999999999987665
No 123
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.61 E-value=2.1e-13 Score=113.24 Aligned_cols=172 Identities=11% Similarity=0.024 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHh-hhhHHHHHHHHHHhhhchHHHHH-HHHHH
Q 024637 70 LFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASL-AELPGLILSAIIVDKIGRKLSMV-LMFVS 147 (265)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~grr~~~~-~~~~~ 147 (265)
..+........+...+|.+..+.. +.+..+.++..+...+ +...+.+.+++ .||+|||+.++ .+.+.
T Consensus 23 ~~~~~~~~~~~~~p~~~~~l~~~~----------~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~ 91 (393)
T PRK15011 23 VAFLTGIAGALQTPTLSIFLTDEV----------HARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLL 91 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHH
Confidence 344444444444555555553322 4677788887665545 44455555555 99999998754 45555
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcch--hhHHHHHhhhhHHHHHHHHHHHHHHhhcc
Q 024637 148 ACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPART--TGFGVASSLGKVGGMVCPLVAVGLVTSCH 225 (265)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~--~~~g~~~~~~~~g~~~~~~i~~~l~~~~~ 225 (265)
..+......+.++.+.+++...+.+...+...+....+..+..|++.|. ...++.+...++|.+++|.+++++.+..|
T Consensus 92 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~g 171 (393)
T PRK15011 92 GVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFS 171 (393)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcC
Confidence 5565655666777766555544444444455677777777877665553 33467778888999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 226 LRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 226 ~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
|+..|+..++..++.++..++..||.+
T Consensus 172 w~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 172 FTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 999998888777776666665555543
No 124
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.61 E-value=2.4e-14 Score=117.38 Aligned_cols=122 Identities=13% Similarity=0.030 Sum_probs=106.1
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHHHHhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS-AVVTTLLLFGVRMCVTGTITVA 182 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~ 182 (265)
+.+..+.+.......++.+++.++.+++.||++||+.+..+.++.+++.+.+.+.++ .+..++..++.+++.+...+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 322 (365)
T TIGR00900 243 GRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQ 322 (365)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 466677788888888999999999999999999999998887777777776666553 6667777888898888888999
Q ss_pred hhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcc
Q 024637 183 TIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH 225 (265)
Q Consensus 183 ~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~ 225 (265)
.+++.|.+|++.|+++.|+.+...++++.++|.+.|++.+..|
T Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 323 GTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999988654
No 125
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.60 E-value=3.8e-14 Score=118.32 Aligned_cols=165 Identities=12% Similarity=0.133 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHH-H
Q 024637 63 TTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLS-M 141 (265)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~-~ 141 (265)
.++.....+++....++++..|+|.++++.+ .+.+....+.......++.+++.++.|+++||++||+. .
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~---------~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~ 313 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFN---------QGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHT 313 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHH
Confidence 3445555566667778888899999996532 02455666777888889999999999999999997764 3
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHH
Q 024637 142 VLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLV 221 (265)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~ 221 (265)
....++..++..+.....+....++...+.+++.....+..+....|.+|++.|++++|+.+..+++|++++|.+.|.+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~ 393 (412)
T TIGR02332 314 ALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILK 393 (412)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhccccc
Confidence 33443444433222222222222222222333333334455566678899999999999999999999999999999999
Q ss_pred hhcc-hhHHHHHHHHH
Q 024637 222 TSCH-LRLAVILFEVV 236 (265)
Q Consensus 222 ~~~~-~~~~~~~~~~~ 236 (265)
+..| |...+.+.+++
T Consensus 394 ~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 394 DATGSFNSGLWFVAAL 409 (412)
T ss_pred ccCCCCchhHHHHHHH
Confidence 9875 66666554443
No 126
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.60 E-value=1.2e-13 Score=111.43 Aligned_cols=168 Identities=12% Similarity=0.108 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHH
Q 024637 69 VLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSA 148 (265)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~ 148 (265)
...+......|....|+..++++.. +.+...+.+....++++.++|++++|+++|| +.|+.+.....+.
T Consensus 218 ~~t~l~~~g~F~~ftYi~P~L~~v~----------g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~ 286 (394)
T COG2814 218 LATFLFMTGHFALYTYIRPFLESVA----------GFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLL 286 (394)
T ss_pred HHHHHHHcchhhhHHhHHHHHHHcc----------CCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHH
Confidence 3333334444444445555554444 6888899999999999999999999999999 8888888887777
Q ss_pred HHHHHHHhh-cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchh
Q 024637 149 CIFLLPLVF-HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLR 227 (265)
Q Consensus 149 ~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~ 227 (265)
.+..+.+.+ ..+.+...+..++.++.............++ .-++.+..+.++.....++|..+|..++|.+.++.|+.
T Consensus 287 a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~ 365 (394)
T COG2814 287 ALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYA 365 (394)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchH
Confidence 777766665 5555666666666777766666666666667 44567999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHhcCC
Q 024637 228 LAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 228 ~~~~~~~~~~~i~~~~~~~~~ 248 (265)
...++.+.+.+++.++.++..
T Consensus 366 ~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 366 ATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 888888887777777766554
No 127
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.60 E-value=4.3e-14 Score=121.18 Aligned_cols=143 Identities=21% Similarity=0.168 Sum_probs=124.3
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhccc
Q 024637 109 SLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPE 188 (265)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e 188 (265)
+.++..+...++..+++++.|+++|++|||+.++++.++..++.++..++++.+.+++.+++.|++.|+...+...+++|
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sE 169 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISE 169 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhh
Confidence 44788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHHHHHHhcCCccccc
Q 024637 189 IYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSC--HLRLAVILFEVVFVLAIASSLLFPFETMG 253 (265)
Q Consensus 189 ~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 253 (265)
..|++.||...++.+....+|..++ ++.+...... +|+..+.+..+.+++..+. .++.||+.+
T Consensus 170 iap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~ 234 (513)
T KOG0254|consen 170 IAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPR 234 (513)
T ss_pred cCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChH
Confidence 9999999999999999999888877 5555555443 7887777777777766666 555567654
No 128
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.60 E-value=1.2e-13 Score=129.27 Aligned_cols=116 Identities=11% Similarity=-0.034 Sum_probs=100.5
Q ss_pred chHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHh---hcchhHHHHHHHHHHHHHHhhhhhhhhh
Q 024637 108 NSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV---FHQSAVVTTLLLFGVRMCVTGTITVATI 184 (265)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 184 (265)
...++..++..++.+++++++|+++||+|||++++++.++.++..++.. ...+.+.+++.+++.|++.+...+...+
T Consensus 47 ~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 126 (1146)
T PRK08633 47 ILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYG 126 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHh
Confidence 3456777788888999999999999999999999988776655544433 2466788889999999999999999999
Q ss_pred hcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhh
Q 024637 185 YAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTS 223 (265)
Q Consensus 185 ~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~ 223 (265)
+++|++|++.|+.++|+......+|.+++|.+++++.+.
T Consensus 127 ~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 127 IIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999876
No 129
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.60 E-value=1.3e-13 Score=115.40 Aligned_cols=149 Identities=13% Similarity=0.041 Sum_probs=134.0
Q ss_pred cCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh--cchhHHHHHHHHHHHHHHhhhh
Q 024637 102 VDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF--HQSAVVTTLLLFGVRMCVTGTI 179 (265)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~ 179 (265)
....++.+.+++.+....|.+++.+.+|++.||+|.|+++..+.++.+++.++..+ ..+.+.+++.+++.|++.+..+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~ 146 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLF 146 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHH
Confidence 34567788899999999999999999999999999999999999999999888777 3445577899999999999999
Q ss_pred hhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 180 TVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTS-CHLRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 180 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
+....+.+.+.|+.+|++..++......+|.+++-.+.|++.+. .||...|++.+++.++..++.+++..+
T Consensus 147 pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d 218 (466)
T KOG2532|consen 147 PAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSD 218 (466)
T ss_pred hhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999998 999999999999998877776665543
No 130
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.60 E-value=1.7e-13 Score=113.20 Aligned_cols=185 Identities=17% Similarity=0.169 Sum_probs=129.8
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHH
Q 024637 53 FMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIV 132 (265)
Q Consensus 53 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 132 (265)
.+++|++....+++..++.......+|.+ .+.|.++.+ +.+....+...++..+++++.-.+.+++.
T Consensus 201 ~~llk~~~~~~Fll~~~l~~~~~~~~~~f---~~~yl~~~g----------g~~~~~~g~~~~l~~~aEi~~f~~~~~~~ 267 (400)
T PF03825_consen 201 LKLLKNPRFLVFLLAAFLIGISHAAYYTF---FSIYLQELG----------GYSGSTIGILWALGVVAEIPFFFFSGRFL 267 (400)
T ss_pred HHHhcCccHHHHHHHHHHHHHHHHHHHHH---HHHHHHHcc----------cchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45665544444444333333333333333 444554443 24445667677787889999999999999
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHhhc-chhHHHHHHH----HHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhh
Q 024637 133 DKIGRKLSMVLMFVSACIFLLPLVFH-QSAVVTTLLL----FGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGK 207 (265)
Q Consensus 133 dr~grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ 207 (265)
.|+|.|++++++.+..++=..+.+.. ++.+..+... .+.|+..+........++.+..|++.|+++.++.+....
T Consensus 268 ~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~ 347 (400)
T PF03825_consen 268 KRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSF 347 (400)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHh
Confidence 99999999999999999998888775 4444433333 458888888899999999999999999999999987765
Q ss_pred -HHHHHHHHHHHHHHhhcchhHH------HHHHHHHHHHHHHHHhcCCcc
Q 024637 208 -VGGMVCPLVAVGLVTSCHLRLA------VILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 208 -~g~~~~~~i~~~l~~~~~~~~~------~~~~~~~~~i~~~~~~~~~~~ 250 (265)
+|..+|.+++|++.+.+|.+.. +.+.+++.++..++.+++.+|
T Consensus 348 Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 348 GLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred hHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999998875533 333444444444444444433
No 131
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.60 E-value=2.8e-14 Score=116.73 Aligned_cols=184 Identities=16% Similarity=0.088 Sum_probs=150.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhh-chH
Q 024637 60 LIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKI-GRK 138 (265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr 138 (265)
+.+.++.++..-+..-++||++...+..|+..... +..+.+.+++.-....+..---+..+++||++||+ |+|
T Consensus 19 ~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~------~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~ 92 (498)
T COG3104 19 QPRGLYLIFFVELWERFSYYGMRAILILYLYYQLG------DGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR 92 (498)
T ss_pred CCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcc------ccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 44677788888899999999998777777644331 11346666666666666555567889999999995 999
Q ss_pred HHHHHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC--cchhhHHHHHhhhhHHHHHHH
Q 024637 139 LSMVLMFVSACIFLLPLVFHQ--SAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTP--ARTTGFGVASSLGKVGGMVCP 214 (265)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~--~r~~~~g~~~~~~~~g~~~~~ 214 (265)
+.++.+.+++.++.+++.... +...+++...+..+|.|..=+...+++.|.+|++ +|-.++++.+...|+|+.++|
T Consensus 93 ~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p 172 (498)
T COG3104 93 RTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAP 172 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHH
Confidence 999999999999999998863 5667777777778999999999999999999864 488889999999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCc
Q 024637 215 LVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPF 249 (265)
Q Consensus 215 ~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 249 (265)
++.+++.+..||...|...++...++.+..+..++
T Consensus 173 ~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r 207 (498)
T COG3104 173 IITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRR 207 (498)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999998888888888777766653
No 132
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.59 E-value=2.2e-13 Score=115.91 Aligned_cols=145 Identities=14% Similarity=0.119 Sum_probs=120.5
Q ss_pred CCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh-----cchhHHHHHHHHHHHHHHhhhh
Q 024637 105 SKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-----HQSAVVTTLLLFGVRMCVTGTI 179 (265)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~ 179 (265)
.++..+++......+..++.++++|.++||+.||++++.+.++.++..+.+.. ..+.+.++++.++.|++.....
T Consensus 42 ~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~ 121 (524)
T PF05977_consen 42 GSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFN 121 (524)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 55677788888888899999999999999999999999988877655443332 3567888888899999999999
Q ss_pred hhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCc
Q 024637 180 TVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPF 249 (265)
Q Consensus 180 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 249 (265)
|...+.++|+.|+++...+.++.....++..++||.++|.+....|....|.+-++..++..++.....+
T Consensus 122 PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~ 191 (524)
T PF05977_consen 122 PAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKP 191 (524)
T ss_pred HHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999999999999999999999999999888888887776665555544444443
No 133
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.59 E-value=2.2e-13 Score=112.69 Aligned_cols=136 Identities=10% Similarity=-0.058 Sum_probs=108.8
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
+.+....+....+..++.++..++.|++.||+|+|+.+.++.++.+++.+.+.+.++.+..++..++.|++.+...+...
T Consensus 236 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 315 (382)
T PRK11128 236 GYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAM 315 (382)
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36667778888888888889999999999999999999999988888887777778888888888888988888888888
Q ss_pred hhcccccCCCcchhhHHHHHhhh-hHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 024637 184 IYAPEIYPTPARTTGFGVASSLG-KVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAI 241 (265)
Q Consensus 184 ~~~~e~~p~~~r~~~~g~~~~~~-~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~ 241 (265)
.+..+. +++++++..++.+... .+|..++|.++|.+.|..|. ..++..+++.+++.
T Consensus 316 ~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 316 RYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 888886 5555788888886444 47889999999999999886 45555555544443
No 134
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.59 E-value=1.5e-13 Score=117.00 Aligned_cols=136 Identities=14% Similarity=0.074 Sum_probs=112.1
Q ss_pred chHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcc
Q 024637 108 NSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAP 187 (265)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 187 (265)
.+..|..+...++..++.++.|+++|.+|||..++.+.++..++.++...+++...++....+.|++.|.. ......++
T Consensus 78 ~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~-~~~~~~is 156 (599)
T PF06609_consen 78 DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQ-ELAALAIS 156 (599)
T ss_pred ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHH-HHHHHHHH
Confidence 45567777888899999999999999999999999999999999999999999998999999999986655 45566689
Q ss_pred cccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 024637 188 EIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASS 244 (265)
Q Consensus 188 e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 244 (265)
|+.|.+.|..+.++.....-+....+|.+...+....+|+|.+++..+...++++..
T Consensus 157 El~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 157 ELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLI 213 (599)
T ss_pred HhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHH
Confidence 999999998888777655445556778887776666789999988887766655443
No 135
>PRK10504 putative transporter; Provisional
Probab=99.58 E-value=4.4e-13 Score=114.00 Aligned_cols=123 Identities=11% Similarity=0.040 Sum_probs=99.2
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhc---chhHHHHHHHHHHHHHHhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH---QSAVVTTLLLFGVRMCVTGTIT 180 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~ 180 (265)
+.++...++......++..++.++.|++.||+|||+++..+.++.++..+++.+. .+.+...+..++.|++.+...+
T Consensus 293 g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 372 (471)
T PRK10504 293 GFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFS 372 (471)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHH
Confidence 4666777777777778888888999999999999999998888777776655542 2233334445566777777788
Q ss_pred hhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcch
Q 024637 181 VATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHL 226 (265)
Q Consensus 181 ~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~ 226 (265)
....+..+.+|++.|+.+.|+.++...+|..+|+.+.|.+.+..++
T Consensus 373 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 373 SMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 8888999999999999999999999999999999999999887654
No 136
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.58 E-value=1.6e-13 Score=116.73 Aligned_cols=143 Identities=13% Similarity=0.059 Sum_probs=126.6
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
+.++...+++....++|.++|+++.+++.+|+++++++..+.++.+++.+.+.+.++.+...+..++.|++.........
T Consensus 250 ~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~ 329 (524)
T PF05977_consen 250 GGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLN 329 (524)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677889999999999999999999999999999999999999999988888889988888888899999888888889
Q ss_pred hhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhc
Q 024637 184 IYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLL 246 (265)
Q Consensus 184 ~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 246 (265)
+.+.+..|++.||+++++.++....+..+|.++.|.+.+..|....+.+.++..+++.++.+.
T Consensus 330 t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 330 TLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988887776666555555443
No 137
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.58 E-value=2.3e-13 Score=112.91 Aligned_cols=179 Identities=16% Similarity=-0.015 Sum_probs=117.0
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHH-hhhhHHHHHHH
Q 024637 51 SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIAS-LAELPGLILSA 129 (265)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g 129 (265)
+++++++++..+..+...++... .......+.+.+.++. +.+..+.++...... +..+++.++.|
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~l~~~-----------G~s~~~ig~~~~~~~~~~~~~g~~~~g 265 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAM---TAVSGFGLSKLYLVDA-----------GWPLEWIGRLGMAGGAVTVLLGCGGGA 265 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHH---HHHHHHHHhhHHHHhc-----------CCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34556654443333333333222 2222333455566443 477777788777665 45667789999
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHhh------cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC-CcchhhHHHH
Q 024637 130 IIVDKIGRKLSMVLMFVSACIFLLPLVF------HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPT-PARTTGFGVA 202 (265)
Q Consensus 130 ~l~dr~grr~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~-~~r~~~~g~~ 202 (265)
++.||+|+|+.+.++.++.++..+.... ..+....+....+.+++.+...+.......+..++ +.+++.+++.
T Consensus 266 ~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 345 (390)
T TIGR02718 266 WLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAV 345 (390)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHH
Confidence 9999999999988777665333222211 12223333333444555666667777777677665 8899999999
Q ss_pred HhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 024637 203 SSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIAS 243 (265)
Q Consensus 203 ~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~ 243 (265)
+...++|..++|.+.|++.+..|+...+...+++.+++.+.
T Consensus 346 ~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 346 QSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999989877777766666555443
No 138
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.58 E-value=9e-14 Score=113.32 Aligned_cols=147 Identities=13% Similarity=0.065 Sum_probs=125.5
Q ss_pred CchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhc
Q 024637 107 DNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYA 186 (265)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 186 (265)
....+...++..+.+++...+..++.+|+|.|+.++++.+++.+-.+...+.++++.+.+...+.++-.+.......-|+
T Consensus 258 ~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI 337 (412)
T PF01306_consen 258 NQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYI 337 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567788888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcchhhHHHHH-hhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCccccc
Q 024637 187 PEIYPTPARTTGFGVAS-SLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 253 (265)
Q Consensus 187 ~e~~p~~~r~~~~g~~~-~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 253 (265)
++.+|++..++...+.. ....+|.++.+.++|.+.|+.|.+..+++.+.+.+...++..+..++.++
T Consensus 338 ~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 338 TAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 99999999999999875 55569999999999999999999889999988888777777776654443
No 139
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.58 E-value=3.6e-13 Score=114.83 Aligned_cols=176 Identities=14% Similarity=0.114 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhh-----c
Q 024637 62 RTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKI-----G 136 (265)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g 136 (265)
++.+..++..+......+.....+|.+.++.+ .+..+++....+ ... .++.+++|+++||+ |
T Consensus 12 ~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g-----------~~~~~ig~~~~~-~~~-~~~~~l~gpl~Dr~~~~~~G 78 (491)
T PRK11010 12 PNSAILLILGFASGLPLALTSGTLQAWMTVEN-----------IDLKTIGFFSLV-GQA-YVFKFLWSPLMDRYTPPFLG 78 (491)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----------CCHHHHHHHHHH-HHH-HHHHHHHHHHHHcccccCCC
Confidence 34555556666666666666777788875543 555566654222 222 26889999999999 9
Q ss_pred hHHH-HHHHHHHHHHHHHHHhhc---chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHH
Q 024637 137 RKLS-MVLMFVSACIFLLPLVFH---QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMV 212 (265)
Q Consensus 137 rr~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~ 212 (265)
||+. +.++.+..+++...+.+. .+.+.+.+..++.+++.+...+...++..|++|+++|+.+.++......+|..+
T Consensus 79 rrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~ll 158 (491)
T PRK11010 79 RRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLV 158 (491)
T ss_pred CchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHH
Confidence 9885 556766666666665553 456667777888888888888889999999999999999999999999999999
Q ss_pred HHHHHHHHHh-hcchhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 213 CPLVAVGLVT-SCHLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 213 ~~~i~~~l~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
++.+.+++.+ ..||+..|++.+++.++..+..++. ||+
T Consensus 159 g~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~-~e~ 197 (491)
T PRK11010 159 SGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLA-PEP 197 (491)
T ss_pred HHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 9999999998 4699999998887777665555543 454
No 140
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.57 E-value=1.9e-13 Score=114.51 Aligned_cols=177 Identities=12% Similarity=0.068 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHH
Q 024637 63 TTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMV 142 (265)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 142 (265)
.++.....++.....+.....+.|.+.++.. +.+..+.++..++..++..+++++.|+++||+|||+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~ 80 (420)
T PRK09528 11 NYWIFSLFFFFFFFIWSSWFSFFPIWLHDIN----------GLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLL 80 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHH
Confidence 4444444555555555566677777775432 578889999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHhh-c-chhHH--HHHHHHHHHHHHhhhhhhhhhhcccccC--CCcchhhHHHHHhhhhHHHHHHHHH
Q 024637 143 LMFVSACIFLLPLVF-H-QSAVV--TTLLLFGVRMCVTGTITVATIYAPEIYP--TPARTTGFGVASSLGKVGGMVCPLV 216 (265)
Q Consensus 143 ~~~~~~~~~~~~~~~-~-~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~e~~p--~~~r~~~~g~~~~~~~~g~~~~~~i 216 (265)
++..+.++....... . ..... ......+.++..+...........++.+ .+.++..+|......++|..++|.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~ 160 (420)
T PRK09528 81 WIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFI 160 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHH
Confidence 766555544322111 1 11100 1111122222233322222222233322 2356778888889999999999999
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 217 AVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 217 ~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
.+.+.+. +|+..++..+++.++..++.++..++
T Consensus 161 ~g~l~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~ 193 (420)
T PRK09528 161 AGILFNI-NPQINFWLGSGSALILLVLLFFAKPD 193 (420)
T ss_pred HHHHHhc-CchHhHHHHHHHHHHHHHHHhccccc
Confidence 9998864 77888877777766666665555433
No 141
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.57 E-value=3.8e-13 Score=114.68 Aligned_cols=145 Identities=12% Similarity=0.065 Sum_probs=108.3
Q ss_pred CCCCchHHHHH-HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH---hhc-chhHHHHHHHHHHHHHHhhh
Q 024637 104 KSKDNSLYVDV-FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPL---VFH-QSAVVTTLLLFGVRMCVTGT 178 (265)
Q Consensus 104 ~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~g~~~~~~ 178 (265)
+.+..+.+... ....++.+++.+++|+++||+|+|+.+.++.++.++..+.+ ... ++.+.+.+..++..+..+..
T Consensus 254 G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~ 333 (491)
T PRK11010 254 GFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMG 333 (491)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 47777777776 45567889999999999999999988776665555443322 222 33333344444544445555
Q ss_pred hhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCC
Q 024637 179 ITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 179 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
.+...++..++.|++.+++.+|+.+...++|..+++.+.|++.+..||...|.+.+++.+++.+..+++.
T Consensus 334 ~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 334 TAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667888889999999999999999999999999999999999999998888877777777766666554
No 142
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.57 E-value=1.9e-13 Score=113.70 Aligned_cols=175 Identities=14% Similarity=0.119 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHH
Q 024637 63 TTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMV 142 (265)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 142 (265)
.++.+....+.....+.....++|.+..+.. +.+..+.++..++..++..++.++.|+++||+|||+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~ 72 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVN----------GLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLL 72 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 3444555555556666666677777765432 577888999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHh---hcc-----hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHH
Q 024637 143 LMFVSACIFLLPLV---FHQ-----SAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCP 214 (265)
Q Consensus 143 ~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~ 214 (265)
.+....++...... ..+ ..+..++..++.+++.+...+....+..+..+ .++..+|.....+++|..++|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~ 150 (396)
T TIGR00882 73 WIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCA 150 (396)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHH
Confidence 77665554433221 111 11223344555666666666666666655432 345667788888899999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 215 LVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 215 ~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
.+++.+.+ .+|+..|.+.+.+.++..++.+...++
T Consensus 151 ~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (396)
T TIGR00882 151 SIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPK 185 (396)
T ss_pred HHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99998765 488888888777777666555544444
No 143
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.57 E-value=4.9e-13 Score=111.42 Aligned_cols=170 Identities=14% Similarity=0.057 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhh-----chHH-HH
Q 024637 68 WVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKI-----GRKL-SM 141 (265)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----grr~-~~ 141 (265)
+.+++.+...+.....-+|.++++.+ .+.+++++...+... .+..+++|+++||+ |||| .+
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g-----------~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l 71 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEG-----------LDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWL 71 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHH
Confidence 34455566666666677888887664 888888888666544 68899999999999 7765 67
Q ss_pred HHHHHHHHHHHHHHhhc---chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHH
Q 024637 142 VLMFVSACIFLLPLVFH---QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAV 218 (265)
Q Consensus 142 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~ 218 (265)
.++.++.+++...+.+. .+.+.+++..++.+++.+...+...+++.|.+|+++|+.+.++......+|..+++.+.+
T Consensus 72 ~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~ 151 (402)
T PRK11902 72 LLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLAL 151 (402)
T ss_pred HHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHH
Confidence 77777777777666664 345555555566667777777889999999999999999999999888899999999999
Q ss_pred HHHhh-cchhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 219 GLVTS-CHLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 219 ~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
++.+. .||+..+++.+++.++..+...+. ||+
T Consensus 152 ~l~~~~~gw~~~f~i~a~~~l~~~l~~~~~-~e~ 184 (402)
T PRK11902 152 WLADRVLGWGNTYLLMAGLMLAGALTTLWA-PEP 184 (402)
T ss_pred HHHhcccCHHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 98885 489999988887776655544333 444
No 144
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.57 E-value=7.1e-14 Score=112.89 Aligned_cols=195 Identities=14% Similarity=0.075 Sum_probs=128.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhc
Q 024637 57 SRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIG 136 (265)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 136 (265)
+.++.+...+.-+..+.-....+.+.+..|.+.....+-+++. -+.++...+....+..++.++|.+++|++.||+|
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~---g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~G 112 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESG---GHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFG 112 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCC---CcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 3444454444444444444444555554454432222111111 2355666677888888999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhc-----c--hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHH
Q 024637 137 RKLSMVLMFVSACIFLLPLVFH-----Q--SAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVG 209 (265)
Q Consensus 137 rr~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g 209 (265)
||+++...++++.++.++.... + -.+++...+++.|+|.|+-+|...+..+|....+.||.-.+........|
T Consensus 113 RK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~G 192 (538)
T KOG0252|consen 113 RKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFG 192 (538)
T ss_pred chhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchh
Confidence 9999999999999998866651 1 13567788999999999999999999999999999999998887777766
Q ss_pred HHHHHHHHHHHHh----hcc----------hhHHHHHHHHHHHHHHHHHhcCCcccccc
Q 024637 210 GMVCPLVAVGLVT----SCH----------LRLAVILFEVVFVLAIASSLLFPFETMGR 254 (265)
Q Consensus 210 ~~~~~~i~~~l~~----~~~----------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 254 (265)
...|.++.-.+.. ..+ .|...+.++++..+..+...+..|||++-
T Consensus 193 ilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y 251 (538)
T KOG0252|consen 193 ILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARY 251 (538)
T ss_pred HhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhH
Confidence 5555544443332 111 12223334444444444444556787653
No 145
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.56 E-value=1.6e-13 Score=114.35 Aligned_cols=175 Identities=17% Similarity=0.187 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHH
Q 024637 62 RTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSM 141 (265)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 141 (265)
+.++++.+.+++....+.++..++|.+.++.. +.........+..+...++.+++|+++||+|+++++
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~------------~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl 319 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF------------PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVT 319 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc------------ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHH
Confidence 34556666666666677777778888875432 222333334455677888899999999999999999
Q ss_pred HHHHHHHHHHHHHHhh-c-----chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC---------------------Cc
Q 024637 142 VLMFVSACIFLLPLVF-H-----QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPT---------------------PA 194 (265)
Q Consensus 142 ~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~---------------------~~ 194 (265)
.++.+.+.++.+.+.. . .+.+...+..+...++.|...+..+.++++.+|+ ++
T Consensus 320 ~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (462)
T PRK15034 320 LINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTE 399 (462)
T ss_pred HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHH
Confidence 9888877776644322 1 2344444444445566677778888888888875 15
Q ss_pred chhhHHHHHhhhhHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHHHHHHHhcCC
Q 024637 195 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHL-RLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 195 r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~-~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
-|.+.|+....+.+|+++.|.+.|...+..|. ...+..+.+..+++.++.++..
T Consensus 400 ~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 400 TAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred HHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 67888999999999999999999998887664 4456666677777777777665
No 146
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.55 E-value=2.4e-13 Score=109.10 Aligned_cols=144 Identities=16% Similarity=0.209 Sum_probs=121.6
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
+.+..+..+.....++..++|+++.|++.||+|.|+++.++.++..+.++...+......+.++..+.|++.|+.++..-
T Consensus 284 gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SR 363 (438)
T COG2270 284 GLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSR 363 (438)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHH
Confidence 58888999999999999999999999999999999999999998888888777766666677778889999999999999
Q ss_pred hhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHH-HHHHHHHHHHHHHHhcC
Q 024637 184 IYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAV-ILFEVVFVLAIASSLLF 247 (265)
Q Consensus 184 ~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~-~~~~~~~~i~~~~~~~~ 247 (265)
++..++.|+++-++.+|+++..++.++.+||++.+.+.+..|....- ....++..++.++.+..
T Consensus 364 Sy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v 428 (438)
T COG2270 364 SYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRV 428 (438)
T ss_pred HHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEee
Confidence 99999999999999999999999999999999999999887764433 33333344444444333
No 147
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.55 E-value=7.7e-13 Score=110.89 Aligned_cols=179 Identities=10% Similarity=0.028 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHh----hhchH
Q 024637 63 TTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVD----KIGRK 138 (265)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~grr 138 (265)
+++......++..+.+.....+++.|.... +.+....+....+..+..++..++.|+++| |+|||
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~l-----------g~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRR 73 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQEL-----------GIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRR 73 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCCh
Confidence 444445555555555555555566566443 477788888889999999999999999999 59999
Q ss_pred HHHHHH-HHHHHHHHHHHhhcchh-----------------HHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcc--hhh
Q 024637 139 LSMVLM-FVSACIFLLPLVFHQSA-----------------VVTTLLLFGVRMCVTGTITVATIYAPEIYPTPAR--TTG 198 (265)
Q Consensus 139 ~~~~~~-~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r--~~~ 198 (265)
+.++++ .+...++.+++.+..+. +..++...+..++.+...++..++++|++|+++| +.+
T Consensus 74 rp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a 153 (477)
T TIGR01301 74 RPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIA 153 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHH
Confidence 998875 55555555555554332 2233334455567777888899999999999865 578
Q ss_pred HHHHHhhhhHHHHHHHHHHHHH--Hhhc-------------chhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 199 FGVASSLGKVGGMVCPLVAVGL--VTSC-------------HLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 199 ~g~~~~~~~~g~~~~~~i~~~l--~~~~-------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
.++.+.+.++|+++++.++++. .+.. +.+..|.+.+++.++..++..+..+|..
T Consensus 154 ~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 154 NAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 8888999999999999998865 2211 3456777777777777777777777754
No 148
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.55 E-value=1.6e-13 Score=112.37 Aligned_cols=146 Identities=10% Similarity=-0.039 Sum_probs=118.6
Q ss_pred HHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcch
Q 024637 81 AVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS 160 (265)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~ 160 (265)
....+|.+.++. +.+..+.++..+...++..++.++.|+++||+|||+++.++.++..++.+.. ..++
T Consensus 19 ~~~~lp~l~~~~-----------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~ 86 (355)
T TIGR00896 19 VGPLLPQIRSAL-----------GMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPG 86 (355)
T ss_pred CcccHHHHHHHh-----------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhcc
Confidence 345566666443 4788889999999999999999999999999999999999988877777666 5677
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHH
Q 024637 161 AVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH--LRLAVILFEVVFV 238 (265)
Q Consensus 161 ~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~--~~~~~~~~~~~~~ 238 (265)
.+.+++.+++.|++.+...+....++.|.+| ++|+.+.++.+....+|..+++.+.+.+.+..+ |+..+...+++.+
T Consensus 87 ~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 87 TALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPAL 165 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 7777888889999888877777888888887 579999999999999999999999998887653 6666665555444
Q ss_pred H
Q 024637 239 L 239 (265)
Q Consensus 239 i 239 (265)
+
T Consensus 166 ~ 166 (355)
T TIGR00896 166 L 166 (355)
T ss_pred H
Confidence 3
No 149
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.55 E-value=5.1e-13 Score=114.97 Aligned_cols=195 Identities=27% Similarity=0.409 Sum_probs=149.9
Q ss_pred ccccccccc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHH
Q 024637 50 SSFFMLFSR-KLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILS 128 (265)
Q Consensus 50 ~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (265)
..+.++++. +.++.++..++.++.....+|+.......+. .+.+....+.+....++....
T Consensus 309 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg------------------~~~~~~~~~~~~~~~p~~~~~ 370 (521)
T KOG0255|consen 309 ISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGLG------------------GNIYLNFTLSGLVELPAYFRN 370 (521)
T ss_pred CchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhcC------------------chHHHHHHHHHHHHhhHHHHH
Confidence 457777764 4778888888888888888888876666544 455666666666788888888
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHHhhcchh---HHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhh
Q 024637 129 AIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSA---VVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSL 205 (265)
Q Consensus 129 g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~ 205 (265)
+...|++|||.....+..+..++++...+.... +...+...+..++.+..+...+.+.+|++|+..|..+.+.....
T Consensus 371 ~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~ 450 (521)
T KOG0255|consen 371 GLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAA 450 (521)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 999999999999999999999999888874332 24556666666777778888899999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCccccccchhhhhhhc
Q 024637 206 GKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRELKDTVDAI 263 (265)
Q Consensus 206 ~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 263 (265)
..+|++++|.+...... ......+..++....+..++...+.||++++++.+..++.
T Consensus 451 ~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~ 507 (521)
T KOG0255|consen 451 ARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDA 507 (521)
T ss_pred HHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHH
Confidence 99999999999865544 2333333335667777777776777899988776654443
No 150
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.55 E-value=6.3e-14 Score=118.47 Aligned_cols=166 Identities=6% Similarity=0.018 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhh--chHHHHHH
Q 024637 66 LLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKI--GRKLSMVL 143 (265)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--grr~~~~~ 143 (265)
......+.....++....++|.|.++. +.+....+...++.+++.+++.++.|+++||. ++|+...+
T Consensus 245 ~~~~~~~l~~~~~~~~~~~l~~~~~~~-----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 313 (455)
T TIGR00892 245 VYLSGNVIMFLGFFAPIIFLVPYAKDK-----------GVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLF 313 (455)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHH
Confidence 333334444455556666777777443 46677888888888899999999999999973 34433333
Q ss_pred --HHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHH
Q 024637 144 --MFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLV 221 (265)
Q Consensus 144 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~ 221 (265)
+.++.+++.+.....++.+.+++..++.|++.+...+...+++.|.+|++.+++++|+.+...++|++++|.++|.+.
T Consensus 314 ~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~ 393 (455)
T TIGR00892 314 SFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLV 393 (455)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeee
Confidence 333334444444456677777777888888888888889999999999999999999999999999999999999999
Q ss_pred hhcc-hhHHHHHHHHHHHHHHH
Q 024637 222 TSCH-LRLAVILFEVVFVLAIA 242 (265)
Q Consensus 222 ~~~~-~~~~~~~~~~~~~i~~~ 242 (265)
+..+ +...+.+.+++.+++.+
T Consensus 394 ~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 394 DATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred hhcCCcchHHHHhhHHHHHHHH
Confidence 8774 66777766666555544
No 151
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.54 E-value=3.6e-13 Score=111.49 Aligned_cols=125 Identities=21% Similarity=0.195 Sum_probs=102.0
Q ss_pred hhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhH--------HHHHHHHHHHHHHhhhhhhhhhhccccc
Q 024637 119 LAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAV--------VTTLLLFGVRMCVTGTITVATIYAPEIY 190 (265)
Q Consensus 119 ~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~e~~ 190 (265)
++..+++++.|+++||+|||+++.++.++..++.++..+.++.. .+++.+++.|++.+...+....++.|.+
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~ 125 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYA 125 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcC
Confidence 44457889999999999999999999999999988888766643 4667788899888888889999999999
Q ss_pred CCCcchhhHHHHHhhhhHHHHHHHHHHHHHH--------hhcchhHHHHHHHHHHHHHHHH
Q 024637 191 PTPARTTGFGVASSLGKVGGMVCPLVAVGLV--------TSCHLRLAVILFEVVFVLAIAS 243 (265)
Q Consensus 191 p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~--------~~~~~~~~~~~~~~~~~i~~~~ 243 (265)
|+++|+...++.+....+|..+++.+.+.+. +..+|+..+.+.+++.++...+
T Consensus 126 ~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 126 PPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998877654 3457887777666555544433
No 152
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.54 E-value=3.8e-13 Score=115.39 Aligned_cols=199 Identities=16% Similarity=0.221 Sum_probs=139.6
Q ss_pred cccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHH
Q 024637 51 SFFMLFSRKLIRTTLLLWVLFFA-NVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSA 129 (265)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 129 (265)
.+++++++..+++..+.+..... +...+.....|.+.+.+..+ .+... .....+.++...++.+++.
T Consensus 283 ~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g-----------~~~~~-~~~~~~~~~v~~~~t~~~~ 350 (513)
T KOG0254|consen 283 SWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAG-----------LKSDT-FLASIILGVVNFLGTLVAT 350 (513)
T ss_pred cHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcC-----------CCCch-HHHHHHHHHHHHHHHHHHH
Confidence 35666665566666655555444 33444556677777775554 22222 5566667788888889999
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHhhc-----c-------hhHHHHHHHHH-HHHHHhhhhhhhhhhcccccCCCcch
Q 024637 130 IIVDKIGRKLSMVLMFVSACIFLLPLVFH-----Q-------SAVVTTLLLFG-VRMCVTGTITVATIYAPEIYPTPART 196 (265)
Q Consensus 130 ~l~dr~grr~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~~~~~-~g~~~~~~~~~~~~~~~e~~p~~~r~ 196 (265)
++.||+|||+.++.+...+.++.+++... . ..+..++..++ ...+..+..++.+.+.+|.+|.+.|+
T Consensus 351 ~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~ 430 (513)
T KOG0254|consen 351 YLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRS 430 (513)
T ss_pred HHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHh
Confidence 99999999999999999999988876641 1 11222222222 22233334477788999999999999
Q ss_pred hhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH-HHhcCCccccccchhhhhh
Q 024637 197 TGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIA-SSLLFPFETMGRELKDTVD 261 (265)
Q Consensus 197 ~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~ 261 (265)
.+.++.....++.+.+.......+.+..+....+..++.++.+... ..+++.|||++++.++.++
T Consensus 431 ~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~ 496 (513)
T KOG0254|consen 431 KGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINE 496 (513)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHH
Confidence 9999999999988777777777766665434567777777776666 7788889999999887664
No 153
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.54 E-value=4.1e-13 Score=110.06 Aligned_cols=146 Identities=16% Similarity=0.118 Sum_probs=110.6
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhh-----chHHHH-HHHHHHHHHHHHHHhhc---chhHHHHHHHHHHHHH
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKI-----GRKLSM-VLMFVSACIFLLPLVFH---QSAVVTTLLLFGVRMC 174 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----grr~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~ 174 (265)
+.+..+.++.... .+...+ .+++|+++||+ |||+.+ +.+.++.+++...+.+. .+.+.+....++.+++
T Consensus 19 g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~ 96 (356)
T TIGR00901 19 NVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFF 96 (356)
T ss_pred CCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHH
Confidence 3777777777544 333333 88999999998 888874 56666666666555554 3444555555566666
Q ss_pred HhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcc--------hhHHHHHHHHHHHHHHHHHhc
Q 024637 175 VTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH--------LRLAVILFEVVFVLAIASSLL 246 (265)
Q Consensus 175 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~--------~~~~~~~~~~~~~i~~~~~~~ 246 (265)
.+...+...++++|++|+++|+.+.++.....++|.++++.+.+.+.+..+ |+..+++.++..++..+..++
T Consensus 97 ~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 97 SATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred HHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 676778889999999999999999999999999999999999999988888 988898888777766655555
Q ss_pred CCccc
Q 024637 247 FPFET 251 (265)
Q Consensus 247 ~~~~~ 251 (265)
..||+
T Consensus 177 ~~~e~ 181 (356)
T TIGR00901 177 LAKEP 181 (356)
T ss_pred hccCC
Confidence 55554
No 154
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.53 E-value=1.1e-13 Score=113.97 Aligned_cols=154 Identities=16% Similarity=0.179 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhc-hHHH-HHH
Q 024637 66 LLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIG-RKLS-MVL 143 (265)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-rr~~-~~~ 143 (265)
...+..+......+.+..+.|.+..+.. +.+..+.+.......++.+++.++.|++.||.. ||+. +..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~ 289 (379)
T TIGR00881 220 YISLGYVFVYVVRTGILDWSPLYLTQEK----------GFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAV 289 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHH
Confidence 3334444445555666677787775433 466677788888888999999999999999864 3332 222
Q ss_pred HH-HHHHHHHHHHhh--cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHH
Q 024637 144 MF-VSACIFLLPLVF--HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGL 220 (265)
Q Consensus 144 ~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l 220 (265)
.. ....++...... ..+.+...+..++.|+...+..+....+..|.+|++.|+++.|+.+...++|+.++|.+.|.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 369 (379)
T TIGR00881 290 FFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYL 369 (379)
T ss_pred HHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHH
Confidence 22 222222222222 233344445555566555555566778899999999999999999999999999999999999
Q ss_pred HhhcchhHH
Q 024637 221 VTSCHLRLA 229 (265)
Q Consensus 221 ~~~~~~~~~ 229 (265)
.+..|+...
T Consensus 370 ~~~~g~~~~ 378 (379)
T TIGR00881 370 ADGFGWAGA 378 (379)
T ss_pred HHhhccccc
Confidence 998887643
No 155
>PRK09669 putative symporter YagG; Provisional
Probab=99.53 E-value=5.7e-13 Score=112.45 Aligned_cols=116 Identities=14% Similarity=0.047 Sum_probs=89.8
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh--cchhHHHHHHHHHHHHHHhhhhhhhhhhccc
Q 024637 111 YVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF--HQSAVVTTLLLFGVRMCVTGTITVATIYAPE 188 (265)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e 188 (265)
........+..+++.+++++++||+|+|+.+.++.++..+..+.+.+ .++.+..++..++.+++.+...+..+++++|
T Consensus 267 ~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad 346 (444)
T PRK09669 267 TLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSD 346 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444555777788899999999999999998887766554433332 3455666777778899999999999999999
Q ss_pred ccC-------CCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcch
Q 024637 189 IYP-------TPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHL 226 (265)
Q Consensus 189 ~~p-------~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~ 226 (265)
..+ .+..|..+|+.+.+.++|..+++.+.|.+.+..|+
T Consensus 347 ~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 347 VVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred hhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 875 34456778888888899999999999999987665
No 156
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.53 E-value=1.7e-12 Score=104.18 Aligned_cols=160 Identities=14% Similarity=0.108 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHH
Q 024637 62 RTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSM 141 (265)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 141 (265)
+..++..+..+.....--+...|.+.|.++.. ..+.+..+.+...+....+.++|+++.+++.||+|+|+++
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~--------~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l 211 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPH--------ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL 211 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 33444445555555556677778888885321 1146778888888899999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHH
Q 024637 142 VLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLV 221 (265)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~ 221 (265)
.++..+..++.++....++.. .....++.|++.+..+|...+...+.+|++ .+++.++. ..+.+|+++.|.+.|.+.
T Consensus 212 ~~~~~l~~~~~~l~~~~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~la 288 (310)
T TIGR01272 212 AFNAFLAVLLSIGAALTHGYV-AMWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLA 288 (310)
T ss_pred HHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHH
Confidence 888877777765555444433 334555788999999999999999988865 45666664 567799999999999999
Q ss_pred hhcchhHHHHH
Q 024637 222 TSCHLRLAVIL 232 (265)
Q Consensus 222 ~~~~~~~~~~~ 232 (265)
|..|.+.++++
T Consensus 289 d~~g~~~a~~v 299 (310)
T TIGR01272 289 DCLGIQLAFAL 299 (310)
T ss_pred HhccchHHHHH
Confidence 98887777653
No 157
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.52 E-value=8.9e-13 Score=109.99 Aligned_cols=140 Identities=9% Similarity=-0.182 Sum_probs=100.1
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh-----cchhHHHHHHHHHHHHHHhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-----HQSAVVTTLLLFGVRMCVTGT 178 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~ 178 (265)
+.++.+.+.......++.+++.++.|+++||+++|+.+.++.++.+++.+.+.. ..+.++.++..++.+++.+..
T Consensus 247 g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~ 326 (406)
T PRK15402 247 QLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLA 326 (406)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHH
Confidence 355566666666666778899999999999999999988887777666655543 234455566667777777776
Q ss_pred hhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 024637 179 ITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASS 244 (265)
Q Consensus 179 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 244 (265)
.+......... +++.||+..++.+....+|..+|+.+.+++.+..++........+..++..++.
T Consensus 327 ~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK15402 327 NAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLV 391 (406)
T ss_pred hhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 66655555443 347899999999999999999999999999888776554444443333333333
No 158
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.52 E-value=1.5e-12 Score=107.80 Aligned_cols=156 Identities=10% Similarity=0.084 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHH-H
Q 024637 69 VLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFV-S 147 (265)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~-~ 147 (265)
..++.....+.....++|.+.++. +.+..++++..+...+...++.++.|.++||+||+........ .
T Consensus 11 ~~~~~~~~~~~~~~p~l~~~l~~~-----------g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 79 (382)
T TIGR00902 11 LGFFGYFCAYGIFLPFFPAWLKGI-----------GLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALA 79 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 334444444445566777888554 4788999999999999999999999999999998544322221 1
Q ss_pred HHHHHH-HHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcch
Q 024637 148 ACIFLL-PLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHL 226 (265)
Q Consensus 148 ~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~ 226 (265)
..+..+ .....++.+.+++.+.+.+.+.+...+...++..+. .++|+..+|.....+++|.+++|.+.+++.+..||
T Consensus 80 ~~l~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~ 157 (382)
T TIGR00902 80 SAIFAAAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDE 157 (382)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcCh
Confidence 111212 222467788888888878877777778877777653 46789999999999999999999999999999999
Q ss_pred hHHHHHHHHHH
Q 024637 227 RLAVILFEVVF 237 (265)
Q Consensus 227 ~~~~~~~~~~~ 237 (265)
+..+.......
T Consensus 158 ~~~f~~~~~~~ 168 (382)
T TIGR00902 158 QNILAILTAGL 168 (382)
T ss_pred hHHHHHHHHHH
Confidence 98887765543
No 159
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.51 E-value=1.4e-12 Score=108.00 Aligned_cols=155 Identities=10% Similarity=0.009 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchH----HHHHHHHHHHH
Q 024637 74 NVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRK----LSMVLMFVSAC 149 (265)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr----~~~~~~~~~~~ 149 (265)
....+.....++|.+.++. +.+..++++..++..++..++.++.|+++||+||+ +.+.+...+.
T Consensus 16 ~~~~~g~~~p~l~~~l~~~-----------g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~- 83 (382)
T PRK11128 16 YFFAYGVFLPFWSVWLKGQ-----------GYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF- 83 (382)
T ss_pred HHHHHHHHhhhHHHHHHhc-----------CCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH-
Confidence 3344445556677777554 47889999999999999999999999999999984 2322222111
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHH
Q 024637 150 IFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLA 229 (265)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~ 229 (265)
........++.+.+++.+++.+++.+...+...++..+. .+.|+.+.+.....+++|.+++|.+++++.+..||+..
T Consensus 84 -~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~ 160 (382)
T PRK11128 84 -AVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAI 160 (382)
T ss_pred -HHHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHH
Confidence 122222357788888888888888777778777776665 34578888999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHH
Q 024637 230 VILFEVVFVLAIAS 243 (265)
Q Consensus 230 ~~~~~~~~~i~~~~ 243 (265)
++..++...+..+.
T Consensus 161 f~~~~~~~~~~~~~ 174 (382)
T PRK11128 161 LWILTAGVASMLLG 174 (382)
T ss_pred HHHHHHHHHHHHHH
Confidence 87766554444433
No 160
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.50 E-value=8.8e-13 Score=109.66 Aligned_cols=142 Identities=17% Similarity=0.113 Sum_probs=110.9
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh---cchhHHHHHHHHHHHHHHhhhhhhhhhhcc
Q 024637 111 YVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF---HQSAVVTTLLLFGVRMCVTGTITVATIYAP 187 (265)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 187 (265)
+...++..+++++|+++.++++||+|||..+.+..++..++.+++.+ .++...+++.+++.|+..+........++.
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~ 142 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLT 142 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 34556667999999999999999999999999888888877776665 677888999999999999999999999999
Q ss_pred cccCCCcchhhHHHHHhhhhHHHHHHHHHH-HHHHhh-cchhHHHHHHHHHHHHHHHHHhcCCccccc
Q 024637 188 EIYPTPARTTGFGVASSLGKVGGMVCPLVA-VGLVTS-CHLRLAVILFEVVFVLAIASSLLFPFETMG 253 (265)
Q Consensus 188 e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~-~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 253 (265)
|..|.+.||....+......+|..++..++ ..+... ..|...+....+..++..+...++ ||+.+
T Consensus 143 E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~-PESPk 209 (485)
T KOG0569|consen 143 EISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFL-PESPK 209 (485)
T ss_pred hcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcC-CCCcc
Confidence 999999999999999999999988884443 444433 235544444444445555555554 57654
No 161
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.50 E-value=1.5e-12 Score=106.78 Aligned_cols=145 Identities=12% Similarity=0.064 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhh-chHHHHHHHHHHH
Q 024637 70 LFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKI-GRKLSMVLMFVSA 148 (265)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~ 148 (265)
..+.....++....|.|.+.++. +.+....+...+...++.++++++.|++.||+ +||+.+.++.++.
T Consensus 205 ~~~~~~~~~~~~~~~lp~~~~~~-----------g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~ 273 (355)
T TIGR00896 205 FFGLQSGLYYSLIGWLPAILISH-----------GASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQ 273 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHH
Confidence 33444556667777888888553 36667788888888999999999999999999 5666767777777
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhccccc-CCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcch
Q 024637 149 CIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIY-PTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHL 226 (265)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~-p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~ 226 (265)
+++.+.+.+..+..... ...+.|++.+..++...+.+.+.. +++.++...++.+.+++++..++|.+.|++.+..|.
T Consensus 274 ~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 274 LVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGN 351 (355)
T ss_pred HHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 77666555544332222 345678888888877777666544 456789999999999999999999999999998764
No 162
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.49 E-value=1.2e-12 Score=111.22 Aligned_cols=119 Identities=12% Similarity=0.073 Sum_probs=90.5
Q ss_pred chHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh-----cchhHHHHHHHHHHHHHHhhhhhhh
Q 024637 108 NSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-----HQSAVVTTLLLFGVRMCVTGTITVA 182 (265)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~ 182 (265)
...+....+..++.+++.++.++++||+|+|+.+.++.++..++.+.+.. ..+.+..++..++.+++.+..++..
T Consensus 266 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~ 345 (473)
T PRK10429 266 DLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQ 345 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556666788899999999999999999998887766655444322 3345556666677888888888999
Q ss_pred hhhcccccC-------CCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcch
Q 024637 183 TIYAPEIYP-------TPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHL 226 (265)
Q Consensus 183 ~~~~~e~~p-------~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~ 226 (265)
+++++|..+ .+..|..+|....+..+|..+++.+.|++++..|+
T Consensus 346 ~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 346 VIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999955 33456677787888889999999999999886654
No 163
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.49 E-value=3.9e-13 Score=113.87 Aligned_cols=176 Identities=16% Similarity=0.190 Sum_probs=146.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhc--hHH
Q 024637 62 RTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIG--RKL 139 (265)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--rr~ 139 (265)
+.++...+........++....++|.+.++. +.+..+.....++.++..++++++.|+++|+.. ++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~-----------g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~ 366 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSL-----------GLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALV 366 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----------CCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHH
Confidence 4455555556667777888888999998654 477788899999999999999999999999987 556
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHH
Q 024637 140 SMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
+..++.++.+++.+.+.+.++++.++....++|++.+...+.....+.|+.+.+.-..+.|+...+..++..+||.+.|+
T Consensus 367 ~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~ 446 (509)
T KOG2504|consen 367 LFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGL 446 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCccccee
Confidence 67778888888888888889999999999999999999988888999999999999999999999999999999999999
Q ss_pred HHhhcc-hhHHHHHHHHHHHHHHHHHhcCC
Q 024637 220 LVTSCH-LRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 220 l~~~~~-~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
+.|..+ +...+...++..+++..+.++..
T Consensus 447 ~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 447 LYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 999888 56666666666666665554443
No 164
>PRK10133 L-fucose transporter; Provisional
Probab=99.49 E-value=3.7e-12 Score=107.12 Aligned_cols=132 Identities=9% Similarity=0.002 Sum_probs=103.5
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
+.++...++......++.++++++.+++.||+|+|+++..+.++..+.+++..+.++. ..+....+.+++.+..+|..+
T Consensus 291 g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~~ 369 (438)
T PRK10133 291 GMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYPTIF 369 (438)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHH
Confidence 5788888999999999999999999999999999999888877776666555554443 234556778999999999999
Q ss_pred hhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHH
Q 024637 184 IYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-LRLAVILFEVVFV 238 (265)
Q Consensus 184 ~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~-~~~~~~~~~~~~~ 238 (265)
+...+.+|++ .+++.++.. ...+|+.++|.+.|.+.+..| .+..+++..+..+
T Consensus 370 s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~ 423 (438)
T PRK10133 370 SLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFA 423 (438)
T ss_pred HHHHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 9999998874 567777775 344788999999999999887 5566654444333
No 165
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.49 E-value=2.7e-12 Score=107.88 Aligned_cols=164 Identities=15% Similarity=0.121 Sum_probs=122.5
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHH
Q 024637 48 GFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGA-VLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLI 126 (265)
Q Consensus 48 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (265)
.++.++++++++.++.++...++.........+. .++..+.. +.+ ...+....+..++.+++.+
T Consensus 214 ~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl--------------~~~-~~~~~~~~~~~~~~~v~~~ 278 (428)
T PF13347_consen 214 LRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVL--------------GNE-GLISIFMLIFFVASIVGSP 278 (428)
T ss_pred cccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHh--------------cCc-hhhHHHHHHHHHHHHHHHH
Confidence 3455777776665555555444433222222222 22222222 222 4456666677888899999
Q ss_pred HHHHHHhhhchHHHHHHHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHHHhhhhhhhhhhcccccC-------CCcchh
Q 024637 127 LSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH--QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYP-------TPARTT 197 (265)
Q Consensus 127 ~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p-------~~~r~~ 197 (265)
++++++||+|+|+++..+.++.+++.+.+.+. ++.+..++..++.|++.+..+...+++.+|..+ .+..|.
T Consensus 279 ~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~ 358 (428)
T PF13347_consen 279 LWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGM 358 (428)
T ss_pred HHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHH
Confidence 99999999999999999999999998887775 488888999999999999999999999999987 345688
Q ss_pred hHHHHHhhhhHHHHHHHHHHHHHHhhcch
Q 024637 198 GFGVASSLGKVGGMVCPLVAVGLVTSCHL 226 (265)
Q Consensus 198 ~~g~~~~~~~~g~~~~~~i~~~l~~~~~~ 226 (265)
..|+.+....++..+++.+.+.+.+..|+
T Consensus 359 ~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 359 YFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred HHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 88998999999999999999998876554
No 166
>PRK10054 putative transporter; Provisional
Probab=99.48 E-value=2.7e-12 Score=106.70 Aligned_cols=140 Identities=14% Similarity=0.080 Sum_probs=106.6
Q ss_pred CCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhc-chhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 105 SKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH-QSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
.+....+.......+......+..|++.||.++|+.+.++..+.+++.+.+.+. ++.+..++...+.+++.+...+...
T Consensus 241 ~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~ 320 (395)
T PRK10054 241 FAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEY 320 (395)
T ss_pred hHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 333455556666666666777888999999999999988888777777666553 4555566677788888777778888
Q ss_pred hhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHh
Q 024637 184 IYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSL 245 (265)
Q Consensus 184 ~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 245 (265)
..+.+..|++.|++.++..+ ...+|..+||.++|.+.|+.|....+.+.+....+..++..
T Consensus 321 ~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 321 MLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 89999999999999988654 66689999999999999999887777666555555544444
No 167
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.47 E-value=6.3e-12 Score=104.78 Aligned_cols=141 Identities=13% Similarity=0.098 Sum_probs=96.7
Q ss_pred CCCCchHHHHHHHHH-hhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH---hhc-chhHHHHHHH----HHHHHH
Q 024637 104 KSKDNSLYVDVFIAS-LAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPL---VFH-QSAVVTTLLL----FGVRMC 174 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~----~~~g~~ 174 (265)
+.+..+.++.....+ ++.+++.+++|++.||+|+|+.+.++.++..+..+.+ ... ++.+..++.. +..+++
T Consensus 241 G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 320 (402)
T PRK11902 241 GFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMG 320 (402)
T ss_pred CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 466667777665443 4678999999999999999998877776665554333 232 3444444433 244555
Q ss_pred HhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCC
Q 024637 175 VTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 175 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
.+...+....++.+.+|.+. .++.+....++..+++.++|.+.+..|+...|.+.+++.+++.++.+...
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~ 390 (402)
T PRK11902 321 TAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMR 390 (402)
T ss_pred HHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh
Confidence 66666777778888777554 45555566677776777899999999998888888777777766654444
No 168
>PRK09848 glucuronide transporter; Provisional
Probab=99.47 E-value=2.4e-12 Score=108.74 Aligned_cols=163 Identities=11% Similarity=-0.007 Sum_probs=112.0
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHH
Q 024637 51 SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAI 130 (265)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 130 (265)
+++.+++++..... .+..+.....++....+.|.+.++.. +.+.....+......++.+++.++.++
T Consensus 220 ~~~~l~~n~~f~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~l~~~ 286 (448)
T PRK09848 220 SLQTLKRNRPLFML---CIGALCVLISTFAVSASSLFYVRYVL----------NDTGLFTVLVLVQNLVGTVASAPLVPG 286 (448)
T ss_pred HHHHHhCCchHHHH---HHHHHHHHHHHHHHhhhheeeEeeec----------CChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566655443332 23333333444444445666664433 333333333333335667788999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC-------CcchhhHHH
Q 024637 131 IVDKIGRKLSMVLMFVSACIFLLPLVFH--QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPT-------PARTTGFGV 201 (265)
Q Consensus 131 l~dr~grr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~-------~~r~~~~g~ 201 (265)
+.||+|+|+++.++.++.+++.+.+.+. .+.+..++..++.+++.+...+...++.+|..|. +.+|...|+
T Consensus 287 l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~ 366 (448)
T PRK09848 287 MVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSL 366 (448)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHH
Confidence 9999999999999988888777666553 3455555666778888888888899999888764 346899999
Q ss_pred HHhhhhHHHHHHHHHHHHHHhhcch
Q 024637 202 ASSLGKVGGMVCPLVAVGLVTSCHL 226 (265)
Q Consensus 202 ~~~~~~~g~~~~~~i~~~l~~~~~~ 226 (265)
.+....+|..+++.+.+.+++..|+
T Consensus 367 ~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 367 FSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999998876554
No 169
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.46 E-value=3.1e-12 Score=106.49 Aligned_cols=152 Identities=9% Similarity=0.042 Sum_probs=106.7
Q ss_pred HHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHh-hhchHHHHHHHHHHHHHHHHHHhhcc
Q 024637 81 AVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVD-KIGRKLSMVLMFVSACIFLLPLVFHQ 159 (265)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~grr~~~~~~~~~~~~~~~~~~~~~ 159 (265)
...+.|.+.++.+ .++.+.++...+..++...+....+++.| |++.++.+..+..+.+++.+++...+
T Consensus 227 ~~~~~p~~~~~~~-----------~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~ 295 (400)
T PRK11646 227 VMLMLPIMVNDIA-----------GSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS 295 (400)
T ss_pred HHHhhhhhHHhhc-----------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh
Confidence 3456787775543 24456666666666655555555555555 56766667777777777776666666
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcc----hhHHHHHHHH
Q 024637 160 SAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH----LRLAVILFEV 235 (265)
Q Consensus 160 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~----~~~~~~~~~~ 235 (265)
+.+...+...+.+++.+...+...+++.+..|++.||+++|+.+....+|..+||.+.|++.+..+ ....+...+.
T Consensus 296 ~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~ 375 (400)
T PRK11646 296 NLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGI 375 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHH
Confidence 666665666667777777778888999999999999999999999999999999999999998753 2344444444
Q ss_pred HHHHHHHH
Q 024637 236 VFVLAIAS 243 (265)
Q Consensus 236 ~~~i~~~~ 243 (265)
+.++..+.
T Consensus 376 ~~~~~~~~ 383 (400)
T PRK11646 376 IGLITLLA 383 (400)
T ss_pred HHHHHHHH
Confidence 44444443
No 170
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.46 E-value=5.1e-12 Score=104.60 Aligned_cols=143 Identities=11% Similarity=0.055 Sum_probs=98.0
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-HQSAVVTTLLLFGVRMCVTGTITVA 182 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~ 182 (265)
+.++...+.......++.+++.++.|++.||+|+|+.+.++..+.+++.+.+.. .++.+...+..++.+++..+..+..
T Consensus 231 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 310 (382)
T PRK10091 231 GFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPL 310 (382)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHH
Confidence 467778888888889999999999999999999999998888877777655443 4444444444455555544433333
Q ss_pred h-hhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHHHHhcCC
Q 024637 183 T-IYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTS-CHLRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 183 ~-~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
. ....+..|.+.++.+ ..+....+|..+||.+.|++.+. .++...+...+++..+.......+.
T Consensus 311 ~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK10091 311 QILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYG 376 (382)
T ss_pred HHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHh
Confidence 3 344454555555544 34667789999999999999986 5676777766655555444444443
No 171
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.46 E-value=1.2e-12 Score=107.25 Aligned_cols=146 Identities=15% Similarity=0.130 Sum_probs=105.5
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHH-hhhhHHHHHHH
Q 024637 51 SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIAS-LAELPGLILSA 129 (265)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g 129 (265)
+++++++++..+..+...+..+.....++....+.|.+.++. +.+..+.+....+.+ ++.+++.+++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------g~~~~~~g~~~~~~~~~~~~~g~~~~g 266 (356)
T TIGR00901 198 PIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDM-----------GFSKEEIALVAKINGLLGAILGGLIGG 266 (356)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------CCCHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 455555544333344444444445566667777778777542 466677666665544 56789999999
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHhhc-----------chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhh
Q 024637 130 IIVDKIGRKLSMVLMFVSACIFLLPLVFH-----------QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTG 198 (265)
Q Consensus 130 ~l~dr~grr~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~ 198 (265)
++.||+|||+.+.++.++.++...+..+. ++.+......++.+++.+...+...++.+|.+|+++||+.
T Consensus 267 ~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~ 346 (356)
T TIGR00901 267 IIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQ 346 (356)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHH
Confidence 99999999999888888777765544432 3445566667777888899999999999999999999999
Q ss_pred HHHHHhhhh
Q 024637 199 FGVASSLGK 207 (265)
Q Consensus 199 ~g~~~~~~~ 207 (265)
+|+.++..+
T Consensus 347 ~g~~~~~~~ 355 (356)
T TIGR00901 347 MALLSSLSA 355 (356)
T ss_pred HHHHHHHHh
Confidence 999887654
No 172
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.46 E-value=9.2e-13 Score=111.61 Aligned_cols=175 Identities=16% Similarity=0.039 Sum_probs=143.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHH
Q 024637 63 TTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMV 142 (265)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 142 (265)
..+..++.........+.+..+.+.+.++. +.+..++.+..++......+.+++.+.+.||+|.|.+.+
T Consensus 47 V~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f-----------~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i 115 (509)
T KOG2504|consen 47 VVFASFLVNLSTDGLINSFGLLFEELMDYF-----------GSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMI 115 (509)
T ss_pred eeHhHHHHHHhhhcchheehhhHHHHHHHh-----------CCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHH
Confidence 333444444444445555556666666443 356666889999888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHH-HHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHH
Q 024637 143 LMFVSACIFLLPLVFHQSAVVTTLL-LFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLV 221 (265)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~ 221 (265)
.+.++..+++++..++++.|.+++. .++.|+|.+..+.+....+...|++ +|+.+.|+......+|.++-|.+.-++.
T Consensus 116 ~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k-kR~lA~Gia~~GsG~G~~~~~~l~~~l~ 194 (509)
T KOG2504|consen 116 AGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK-KRALATGIAVSGTGVGTVVFPPLLKYLL 194 (509)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH-HHHHHHhhhhccCCcceeeHHHHHHHHH
Confidence 9999999999999999888765554 6778899999988888888877765 5999999999999999999999999999
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHhcCCc
Q 024637 222 TSCHLRLAVILFEVVFVLAIASSLLFPF 249 (265)
Q Consensus 222 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 249 (265)
+.+||++.+++.+.+.+-..+....+.|
T Consensus 195 ~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 195 SKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999998777777777765
No 173
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.44 E-value=1.4e-11 Score=98.51 Aligned_cols=175 Identities=17% Similarity=0.121 Sum_probs=139.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHH
Q 024637 62 RTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSM 141 (265)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 141 (265)
..+..+..+++...+..-......|++.+.. +.+..++++.......+..++++..|++.+|+|+|+-+
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f-----------~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi 81 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVF-----------DLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGI 81 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHh-----------CccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHH
Confidence 3444444555555555555566677665332 58889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh---cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHH
Q 024637 142 VLMFVSACIFLLPLVF---HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAV 218 (265)
Q Consensus 142 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~ 218 (265)
+.++.+++++++++.- ..++..+++..++.+.|.+...+...+++..+.|++....-+.+.+.+..+|++++|.+++
T Consensus 82 ~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~ 161 (422)
T COG0738 82 VLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGS 161 (422)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 9999999999988763 5667778888899999999999999999999999988888999999999999999999999
Q ss_pred HHHhh-------------------cchhHHHHHHHHHHHHHHHHHhcC
Q 024637 219 GLVTS-------------------CHLRLAVILFEVVFVLAIASSLLF 247 (265)
Q Consensus 219 ~l~~~-------------------~~~~~~~~~~~~~~~i~~~~~~~~ 247 (265)
++..+ ..++.++...+...++.++.....
T Consensus 162 ~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~ 209 (422)
T COG0738 162 SLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLS 209 (422)
T ss_pred HHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhc
Confidence 98873 124556666666665555544443
No 174
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.44 E-value=3.7e-12 Score=107.25 Aligned_cols=168 Identities=11% Similarity=0.050 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhh----hchHH-HHHHHHHHHH
Q 024637 75 VFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDK----IGRKL-SMVLMFVSAC 149 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~grr~-~~~~~~~~~~ 149 (265)
...+.....|++.+..+.. +.++..++...++..+...+..++.|+++|| +|||| .++++....+
T Consensus 12 ~~~~~~~~~~l~~~~~~~~----------g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~ 81 (437)
T TIGR00792 12 NFIFAIVSTYLLFFYTDVL----------GLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFS 81 (437)
T ss_pred HHHHHHHHHHHHHHHHHcc----------CCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHH
Confidence 3444444555555554433 5788899999999999999999999999998 67755 5667777777
Q ss_pred HHHHHHhhcch------hHHHHHHHHHHHHHHhhhhhhhhhhccccc-CCCcchhhHHHHHhhhhHHHHHHHHHHHHHHh
Q 024637 150 IFLLPLVFHQS------AVVTTLLLFGVRMCVTGTITVATIYAPEIY-PTPARTTGFGVASSLGKVGGMVCPLVAVGLVT 222 (265)
Q Consensus 150 ~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~-p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~ 222 (265)
++.+++.+.++ .++.++..++.+.+.+....+..++.+|+. ++++|+...++.+....+|+.+++.+.+.+..
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~ 161 (437)
T TIGR00792 82 IVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVS 161 (437)
T ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766665432 234444555666666666677788889987 46789999999888888888887777666653
Q ss_pred -------hcchhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 223 -------SCHLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 223 -------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
..+|+..+.+.+++.++..++.++..+|++
T Consensus 162 ~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 162 YFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred HhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 346777788888777777766666665654
No 175
>PRK11462 putative transporter; Provisional
Probab=99.44 E-value=1e-11 Score=105.09 Aligned_cols=162 Identities=12% Similarity=0.068 Sum_probs=101.7
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHH
Q 024637 51 SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAI 130 (265)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 130 (265)
.++.+++++.++.++...++.........+...|...|. ..+............++.+++.+++++
T Consensus 220 ~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~--------------~g~~~~~~~~l~~~~i~~iig~~l~~~ 285 (460)
T PRK11462 220 DLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI--------------LGTPEVFVAFLTTYCVGNLIGSALAKP 285 (460)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh--------------cCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666666555444444444444455555555554 122223344566667888899999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHHHhhhhhhhhhhcccccC-----CCcchhh--HHH
Q 024637 131 IVDKIGRKLSMVLMFVSACIFLLPLVFH--QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYP-----TPARTTG--FGV 201 (265)
Q Consensus 131 l~dr~grr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p-----~~~r~~~--~g~ 201 (265)
++||+|+|+++..+..+..+..+++.+. .+.+..++..++.+++.+...+..+++.+|..+ +..|..+ ++.
T Consensus 286 l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~ 365 (460)
T PRK11462 286 LTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAG 365 (460)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHH
Confidence 9999999998775555444433333332 223334444556677776666777788887765 3345444 455
Q ss_pred HHhhhhHHHHHHHHHHHHHHhhcch
Q 024637 202 ASSLGKVGGMVCPLVAVGLVTSCHL 226 (265)
Q Consensus 202 ~~~~~~~g~~~~~~i~~~l~~~~~~ 226 (265)
......+|..+++.+.|++++..|+
T Consensus 366 ~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 366 TLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5577789999999999998876544
No 176
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.44 E-value=2.4e-11 Score=100.97 Aligned_cols=138 Identities=10% Similarity=0.030 Sum_probs=101.1
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
+.+....+......+++.+++.++.+++.||.+++.......+..+...++....++.+...+..++.|++.+...+...
T Consensus 248 g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 327 (394)
T PRK10213 248 GFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWS 327 (394)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHH
Confidence 36667778888888899999999999999996544434333333333344444455666667777888888888888888
Q ss_pred hhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 024637 184 IYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIA 242 (265)
Q Consensus 184 ~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~ 242 (265)
+++.+..|+ .++...++.....++|..+||.++|++.+..|....+...+++.++..+
T Consensus 328 ~~~~~~~~~-~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~ 385 (394)
T PRK10213 328 TWITRSLAD-QAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTAL 385 (394)
T ss_pred HHHHHHCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHH
Confidence 788888874 4667777777888899999999999999998887777666555544443
No 177
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.43 E-value=8e-12 Score=103.13 Aligned_cols=162 Identities=15% Similarity=0.157 Sum_probs=117.6
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHH
Q 024637 52 FFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAII 131 (265)
Q Consensus 52 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 131 (265)
+..+++++.++..++..++.++......+...|.-.|. - +.+.............+.+++.++..++
T Consensus 229 ~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~---l----------g~~~l~~~~~~~~~~~~~l~~~~~~p~L 295 (467)
T COG2211 229 FLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYV---L----------GDPELFAYLLLLASGAGLLIGLILWPRL 295 (467)
T ss_pred HHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEE---c----------CChHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 34556665555555544444433333333333322222 1 3444555566666667777779999999
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHHHHHhhhhhhhhhhcccccC-------CCcchhhHHHH
Q 024637 132 VDKIGRKLSMVLMFVSACIFLLPLVFHQ--SAVVTTLLLFGVRMCVTGTITVATIYAPEIYP-------TPARTTGFGVA 202 (265)
Q Consensus 132 ~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p-------~~~r~~~~g~~ 202 (265)
++|+|+|+++.++.++..++.+++.+.+ +.+..++..++.+++.+...+..+++++|..+ .+.-|...|..
T Consensus 296 ~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~ 375 (467)
T COG2211 296 VKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGM 375 (467)
T ss_pred HHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHH
Confidence 9999999999999999999998888844 56677777788999999999999999999864 34557777887
Q ss_pred HhhhhHHHHHHHHHHHHHHhhcch
Q 024637 203 SSLGKVGGMVCPLVAVGLVTSCHL 226 (265)
Q Consensus 203 ~~~~~~g~~~~~~i~~~l~~~~~~ 226 (265)
.++..+|.+++..+.|++++..|+
T Consensus 376 tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 376 TFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 888889999999999999887653
No 178
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.43 E-value=5.7e-12 Score=96.12 Aligned_cols=153 Identities=12% Similarity=-0.016 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHH
Q 024637 61 IRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLS 140 (265)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 140 (265)
.+.+++..++.+....+.+-+...-|.+.++.. +.++...+...+.....+.+.+++.|.++||+|++..
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rf----------GlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~ 332 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRF----------GLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLW 332 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhh----------CCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceeh
Confidence 344555555545445555555555666665554 5777777777777777788999999999999999987
Q ss_pred HHHHHHHHH-HHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHH
Q 024637 141 MVLMFVSAC-IFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 141 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
.+.+..+.. ++...+.++ .+.-++...+.|+.........|..++.+.|.++-|+++|++++..++|-.+.|++.|.
T Consensus 333 wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~ 410 (459)
T KOG4686|consen 333 WVASACILTLLGHSGLFFT--FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGF 410 (459)
T ss_pred hHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhe
Confidence 766554443 344444332 12223445556667666667789999999999999999999999999999999999999
Q ss_pred HHhhcc
Q 024637 220 LVTSCH 225 (265)
Q Consensus 220 l~~~~~ 225 (265)
+.+.-|
T Consensus 411 i~d~~g 416 (459)
T KOG4686|consen 411 IADGDG 416 (459)
T ss_pred eecCCC
Confidence 998766
No 179
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.43 E-value=2.6e-12 Score=107.67 Aligned_cols=187 Identities=14% Similarity=0.200 Sum_probs=134.8
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHH
Q 024637 48 GFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLIL 127 (265)
Q Consensus 48 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (265)
...++++++++ +.++..++..++....++.+..|.|.|+++.. +.+..+.++...+..+...+..++
T Consensus 247 ~~vP~~~i~ts---~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL----------~f~v~~~G~~salP~l~~~~~k~~ 313 (466)
T KOG2532|consen 247 PPVPYKAILTS---PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVL----------GFDVRETGFLSALPFLAMAIVKFV 313 (466)
T ss_pred CCCCHHHHHcC---HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHh----------CCChhhhhHHHHHHHHHHHHHHHH
Confidence 45688888865 56777888888889999999999999997766 678888899999999999999999
Q ss_pred HHHHHhhhch---------HHHHHHHHHHHHHHHHHHhhcch--hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcch
Q 024637 128 SAIIVDKIGR---------KLSMVLMFVSACIFLLPLVFHQS--AVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPART 196 (265)
Q Consensus 128 ~g~l~dr~gr---------r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~ 196 (265)
+|.++||.-+ |-.-.++....+++++.+.+.++ .+..+++.. ...+..+..............++.-+
T Consensus 314 ~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~-~~~~~~g~~~~Gf~~~~~~~apq~a~ 392 (466)
T KOG2532|consen 314 AGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLT-IAIGLSGFNISGFYKNHQDIAPQHAG 392 (466)
T ss_pred HHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHH-HHHHHcccchhhhHhhhhhccchHHH
Confidence 9999998744 22334566666666666666442 222222222 22233333222222222221455689
Q ss_pred hhHHHHHhhhhHHHHHHHHHHHHHHh---hcchhHHHHHHHHHHHHHHHHHhcCC
Q 024637 197 TGFGVASSLGKVGGMVCPLVAVGLVT---SCHLRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 197 ~~~g~~~~~~~~g~~~~~~i~~~l~~---~~~~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
..+|+.+....+.++++|.+.+.+.. ...|+..|++.+++.+++.++..++-
T Consensus 393 ~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 393 FVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEee
Confidence 99999999999999999999999984 33688899998888888876666553
No 180
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.43 E-value=1.2e-11 Score=102.75 Aligned_cols=142 Identities=10% Similarity=-0.025 Sum_probs=106.7
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
+.++.+.+.......++.++++++.+++.||.++|+++..+.+ .++..+.+.+.++.+...+..++.|++.+...+...
T Consensus 237 g~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~ 315 (393)
T PRK11195 237 GITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMN 315 (393)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHH
Confidence 5777788899999999999999999999999998888777753 344444444455556566666678888777777778
Q ss_pred hhcccccCCCc-chhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcC
Q 024637 184 IYAPEIYPTPA-RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 247 (265)
Q Consensus 184 ~~~~e~~p~~~-r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 247 (265)
+.+.+..|++. +|++.++.+...+++..++..+.+.+ +..|....+.+.++..++.+.+.+.+
T Consensus 316 ~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 316 ALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred HHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 88888766655 79999999999999999999998855 66677766666555555555444433
No 181
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.43 E-value=3.3e-12 Score=107.40 Aligned_cols=149 Identities=15% Similarity=0.089 Sum_probs=130.6
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
+....+.+...+++.++.+++.++++.+.||++-.+.+....++.++..++.....+.+.+++.+++.|++-+..+|...
T Consensus 77 ~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~ 156 (495)
T KOG2533|consen 77 KLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVV 156 (495)
T ss_pred chhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHH
Confidence 35557778889999999999999999999999977777777777777666666688899999999999999999999999
Q ss_pred hhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHH------hhcchhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 184 IYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLV------TSCHLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 184 ~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
.++..++.+++|+..+|+.+....+|+++|+++...+. ...||++.|++-+++.++..++++++.|+..
T Consensus 157 ~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P 231 (495)
T KOG2533|consen 157 AILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNP 231 (495)
T ss_pred HHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCCh
Confidence 99999999999999999999999999999999998863 3568999999999999988888887776543
No 182
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.43 E-value=8e-12 Score=106.64 Aligned_cols=147 Identities=13% Similarity=0.075 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHH
Q 024637 68 WVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVS 147 (265)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~ 147 (265)
.+..+.....+++...+.|.+.++.. +.+..+.++......++.+++.++.|++.||+|||+++.++..+
T Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~ 330 (485)
T TIGR00711 261 CVYMSLLGLGLYGSFYLLPLYLQQVL----------GYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLIL 330 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHH
Confidence 34444455566666777888875543 56777888888888899999999999999999999999988888
Q ss_pred HHHHHHHHhh----cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhh
Q 024637 148 ACIFLLPLVF----HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTS 223 (265)
Q Consensus 148 ~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~ 223 (265)
.+++.+.+.+ ..+.+......++.|++.+...+.......+.+|++.|+++.|+.+...++|+.+|+.+.+.+.++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 331 YAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887776652 233455556677788888887777777778889999999999999999999999999999998875
Q ss_pred c
Q 024637 224 C 224 (265)
Q Consensus 224 ~ 224 (265)
.
T Consensus 411 ~ 411 (485)
T TIGR00711 411 R 411 (485)
T ss_pred H
Confidence 3
No 183
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.42 E-value=9.5e-12 Score=116.68 Aligned_cols=135 Identities=11% Similarity=-0.017 Sum_probs=107.8
Q ss_pred CCCCc-hHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhh
Q 024637 104 KSKDN-SLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVA 182 (265)
Q Consensus 104 ~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 182 (265)
+.+.. ..++......++.+++.++.|+++||+++++++.++.++.+++.+++.+..+.+..++..++.|++.+...+..
T Consensus 264 g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 343 (1146)
T PRK08633 264 GLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPL 343 (1146)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHH
Confidence 45556 77888888889999999999999999999998888888888887777777777777777888888888888889
Q ss_pred hhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Q 024637 183 TIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTS-CHLRLAVILFEVVFV 238 (265)
Q Consensus 183 ~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~-~~~~~~~~~~~~~~~ 238 (265)
.+++.+..|++.||+++|+.+.+.++|.++++.+++.+... .++...+++.+.+.+
T Consensus 344 ~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 344 NALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTL 400 (1146)
T ss_pred HHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888877766442 233334444444333
No 184
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.42 E-value=2.6e-12 Score=104.87 Aligned_cols=132 Identities=19% Similarity=0.277 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCC-CchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q 024637 73 ANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSK-DNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIF 151 (265)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~ 151 (265)
.....++....+.|.+..+.. +.+ ..+.+....+..+...++.++.|++.||+++|+...+......+.
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 286 (352)
T PF07690_consen 217 LFFFVFSGFSFFLPLYLQEVL----------GFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILG 286 (352)
T ss_dssp HHHHHHHHHHHHHHHHCCHHH----------HCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccchhhhhcc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 334455567777887743322 355 466777788888888999999999999999888777777766666
Q ss_pred HHHHhh---cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHH
Q 024637 152 LLPLVF---HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCP 214 (265)
Q Consensus 152 ~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~ 214 (265)
.+.+.. ..+..+.++..++.|++.+...+....++.|.+|++.||++.|+.+...++|+.++|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 287 ALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 665554 334566666777888888888999999999999999999999999999999999987
No 185
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.42 E-value=1.5e-11 Score=102.15 Aligned_cols=126 Identities=13% Similarity=0.028 Sum_probs=83.5
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
+.+....+.......++.+++.++.+++.||+|||+.+.++..+..++.+.+....+.+..+....+.+.+.+...+..
T Consensus 235 g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~- 313 (392)
T PRK10473 235 GFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGVA- 313 (392)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-
Confidence 4566667777788888899999999999999999999998888888777766665444433333344444443333332
Q ss_pred hhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHH
Q 024637 184 IYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFE 234 (265)
Q Consensus 184 ~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~ 234 (265)
...++.|.+.|+ |.......++..+++.+.+++.+..|+.......+
T Consensus 314 -~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~ 360 (392)
T PRK10473 314 -MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIG 360 (392)
T ss_pred -HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Confidence 334445555443 44445556777788888888888777654333333
No 186
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.42 E-value=1.3e-11 Score=102.07 Aligned_cols=137 Identities=13% Similarity=0.045 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 024637 75 VFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLP 154 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 154 (265)
...++....+.|.+.++.. +.++.+.+.......++.+++.++.|++.||+|+|+.+..+.++..++.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~----------g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 288 (385)
T TIGR00710 219 FGGFFAFFSGAPFVYIDIM----------GVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVL 288 (385)
T ss_pred HHHHHHHHHcChHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 3344455555666654322 466677788888888999999999999999999999988887777666555
Q ss_pred Hhhc-----chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHh
Q 024637 155 LVFH-----QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVT 222 (265)
Q Consensus 155 ~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~ 222 (265)
+... .+....+...++.+++.+...+.......|..| +.|+++.++.+.....++.+.+.+.+.+.+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~ 360 (385)
T TIGR00710 289 LEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHG 360 (385)
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 4431 223344445666778888888888888889887 569999999988877544444444554433
No 187
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.40 E-value=1.2e-11 Score=105.84 Aligned_cols=147 Identities=10% Similarity=-0.009 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHH
Q 024637 66 LLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMF 145 (265)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~ 145 (265)
...+..+.....+++...+.|.+.+... +.++.+.+.......++..+++++.|++.||+|+|+.+..+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~lq~v~----------g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~ 332 (495)
T PRK14995 263 SGVVMAMTAMITLVGFELLMAQELQFVH----------GLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGM 332 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHH
Confidence 3334444445556667777888876544 577788899998889999999999999999999999988888
Q ss_pred HHHHHHHHHHhh---cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHh
Q 024637 146 VSACIFLLPLVF---HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVT 222 (265)
Q Consensus 146 ~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~ 222 (265)
++.+++.+.+.. ..+.+......++.|++.+...+.....+.+..|++.++.+.++.+...++|+.+|+.+.+.+.+
T Consensus 333 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 333 ALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877776655443 23455556677888999888888888888899999999999999999999999999999998865
No 188
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.39 E-value=3.8e-15 Score=125.90 Aligned_cols=144 Identities=16% Similarity=0.166 Sum_probs=118.1
Q ss_pred chHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcc---hhHHHHHHHHHHHHHHhhhhhhhhh
Q 024637 108 NSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ---SAVVTTLLLFGVRMCVTGTITVATI 184 (265)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~ 184 (265)
....+..+...++..+|+++.|+++||+|||+.+.++.++..++.++..+++ +.+.+.+.+++.|++.|+..+....
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3467778888899999999999999999999999999999999999999988 8899999999999999999999999
Q ss_pred hcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhc---chhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 185 YAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSC---HLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 185 ~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
++.|..|++.|+...++.+....+|..++..+...+.... +|+..+....+..++..+.. ++.||+.
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP 195 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPESP 195 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccc
Confidence 9999999999999999999888888888777765443322 36656555555554444433 4456764
No 189
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.38 E-value=3.4e-11 Score=99.42 Aligned_cols=114 Identities=14% Similarity=0.096 Sum_probs=78.5
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh----cchhHHHHHHHHHHHHHHhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF----HQSAVVTTLLLFGVRMCVTGTI 179 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~ 179 (265)
+.+..+.+.......++.+++.++.|++.||+|||+.+..+.++..+..+.... ..+.+...+...+.+.+.+...
T Consensus 226 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (377)
T PRK11102 226 GVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMIS 305 (377)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhh
Confidence 466677888888888999999999999999999999988877665443332221 2233433344444444444555
Q ss_pred hhhhhhcccccCCCcchhhHHHHHhhhh-HHHHHHHHHHH
Q 024637 180 TVATIYAPEIYPTPARTTGFGVASSLGK-VGGMVCPLVAV 218 (265)
Q Consensus 180 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~-~g~~~~~~i~~ 218 (265)
+.....+.|..| +.|+++.++.+.... +|..+++.+.+
T Consensus 306 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 306 SNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 556667778777 679999998876654 67777776654
No 190
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.38 E-value=5.4e-11 Score=99.27 Aligned_cols=138 Identities=8% Similarity=-0.042 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 024637 75 VFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLP 154 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 154 (265)
.....+...+++.|.++.+. +.+.............+..+|+++++++.||+++|+++.+..++..++.++
T Consensus 245 vg~e~~~~s~l~~y~~~~~~---------~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll 315 (410)
T TIGR00885 245 VGVQIMCWTFIIQYAVRLIP---------GMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLG 315 (410)
T ss_pred HHHHHHHHHHHHHHHhhccC---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 33344455667777643320 122222233444445677899999999999999999998888888888877
Q ss_pred HhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhc
Q 024637 155 LVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSC 224 (265)
Q Consensus 155 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~ 224 (265)
....++.. ......+.+++.+..+|..++...+..+++.+..+.++.... +|+.+.|.+.|++.|..
T Consensus 316 ~~~~~~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 316 SIFAGGHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMK 382 (410)
T ss_pred HHHcCChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHh
Confidence 77765543 355666777888899999999999999988765555555544 99999999999999954
No 191
>PRK11043 putative transporter; Provisional
Probab=99.38 E-value=8.1e-11 Score=98.09 Aligned_cols=139 Identities=12% Similarity=0.094 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q 024637 76 FSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPL 155 (265)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 155 (265)
..++....+.|.+.++. +.+..+.++......++..+++++.+++.||+|+|+......+..+++.+.+
T Consensus 217 ~~~~~~~~~~p~~~~~~-----------g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~ 285 (401)
T PRK11043 217 AAFFAWLTGSPFILEQM-----------GYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAI 285 (401)
T ss_pred HHHHHHHHHhHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 33444555677776443 3666677776677777888999999999999999987655544444433222
Q ss_pred ---hh--cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcch
Q 024637 156 ---VF--HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHL 226 (265)
Q Consensus 156 ---~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~ 226 (265)
.. .++.+..++...+.+++.+..++.......+..|. .|+++.|+.+.....++..++.+.+.+.+....
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~ 360 (401)
T PRK11043 286 WLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-ATGKAAALQNTLQLGLCFLASLLVSALISTPLL 360 (401)
T ss_pred HHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-cChHHHHHHHHHHHHHHHHHHHHHHHccCCChh
Confidence 11 23444444555667777788888887777777764 699999999999888888999999988765433
No 192
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.37 E-value=4.2e-11 Score=95.79 Aligned_cols=175 Identities=13% Similarity=0.115 Sum_probs=132.3
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHH
Q 024637 51 SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAI 130 (265)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 130 (265)
...+++++++.+...+..+++.+.-. ....|++.|..+.. +.+..+.....+.+..+.++|++++.+
T Consensus 228 ~~~~l~~~~~~~~gvl~~FlYVG~Ev---a~gsfl~~y~~~~~----------g~~~~~aa~~~s~~~~~~~vGRFig~~ 294 (422)
T COG0738 228 GLSSLFQNKHLRLGVLAIFLYVGAEV---AIGSFLVSYLEELL----------GLNEQQAAYYLSFFWVGFMVGRFIGSA 294 (422)
T ss_pred hHHHHHhChHHHHHHHHHHHHHhHHH---HHHHHHHHHHHhcC----------CccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677777666666665555554433 45556777775533 577788888999999999999999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHH
Q 024637 131 IVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGG 210 (265)
Q Consensus 131 l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~ 210 (265)
+..|+...|.+....++..+.++...+.++.+ .+...++.|++.+..+|..++...+..|.+ .+..|..-...-+|+
T Consensus 295 lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v-~~~~l~~ig~F~simfPTIfslal~~l~~~--ts~~s~~l~maivGG 371 (422)
T COG0738 295 LMSRIKPEKYLAFYALIAILLLLAVALIGGVV-ALYALFLIGLFNSIMFPTIFSLALKNLGEH--TSVGSGLLVMAIVGG 371 (422)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHhcChH-HHHHHHHHHHHhHHHHHHHHHHHHhccCcc--ccccceeeeeheecc
Confidence 99999999999988888888887777777744 455566788999999999999999999933 333444445556899
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 024637 211 MVCPLVAVGLVTSCHLRLAVILFEVVFVLAI 241 (265)
Q Consensus 211 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~ 241 (265)
++.|.+.|++.|..|....+.....+|.+..
T Consensus 372 AiiP~l~G~i~d~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 372 AIIPPLQGVIADMFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred hHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999988777765555555444
No 193
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.37 E-value=2.2e-11 Score=114.06 Aligned_cols=154 Identities=11% Similarity=0.011 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 024637 75 VFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLP 154 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 154 (265)
.+..+.+..+.|.|.++.. +.+....++..+...++.++|.++.|+++|+.++++.+..+.++.+++.+.
T Consensus 238 ~~~~~~~~~~~p~~~~~~~----------g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 307 (1140)
T PRK06814 238 WLVGAVVLSQLPLLAKETL----------GGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLD 307 (1140)
T ss_pred HHHHHHHHHHhHHHHHHHc----------CCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHH
Confidence 3444455566777775443 466778888889999999999999999999887766655555555444433
Q ss_pred Hhhc--------------------chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHH
Q 024637 155 LVFH--------------------QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCP 214 (265)
Q Consensus 155 ~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~ 214 (265)
+.+. .+.+.+++..++.|++.+...+...+++.+.+|++.||+++|+.+++..+|..+++
T Consensus 308 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~ 387 (1140)
T PRK06814 308 LAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGT 387 (1140)
T ss_pred HHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHH
Confidence 3221 55666677778888888888888999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cchhHHHHHHHHHHH
Q 024637 215 LVAVGLVTS-CHLRLAVILFEVVFV 238 (265)
Q Consensus 215 ~i~~~l~~~-~~~~~~~~~~~~~~~ 238 (265)
.+.+.+.+. .+....+++.+++.+
T Consensus 388 ~~~g~l~~~~~~~~~~~~~~~~~~~ 412 (1140)
T PRK06814 388 IILALLQALGFSIPWIILFIALANL 412 (1140)
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHH
Confidence 999988743 344444444444333
No 194
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.35 E-value=8e-11 Score=92.94 Aligned_cols=182 Identities=12% Similarity=0.082 Sum_probs=133.8
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHH
Q 024637 52 FFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAII 131 (265)
Q Consensus 52 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 131 (265)
-..+++++ ..+...+..-.++..+|....|+|.+..+.+ .+..+.+...++..+..++.++....+
T Consensus 201 ~~~vw~~~---~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G-----------~sa~~aG~llsl~~l~~~~~~ll~P~l 266 (395)
T COG2807 201 VRKVWRSP---LAWQVTLFMGLQSLLYYIVIGWLPAILIDRG-----------LSAAEAGSLLSLMQLAQLPTALLIPLL 266 (395)
T ss_pred ccccccCc---hhHHHHHHHHhhHHHHHHHHHHHHHHHHHcC-----------CCHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 34455443 2333344444578889999999999997775 888999999999999999999999999
Q ss_pred Hhhh-chHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC-CcchhhHHHHHhhhhHH
Q 024637 132 VDKI-GRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPT-PARTTGFGVASSLGKVG 209 (265)
Q Consensus 132 ~dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~-~~r~~~~g~~~~~~~~g 209 (265)
.+|. .+|+..+...+++.++...+.+.+......- .++.|++.|+.++.....+....+. +.-+.-.|+.+.++.+-
T Consensus 267 a~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYll 345 (395)
T COG2807 267 ARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLL 345 (395)
T ss_pred HHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHH
Confidence 9975 5777777777777777777666433222222 5788999999999999988877654 45677788889999999
Q ss_pred HHHHHHHHHHHHhhcchhHH-HHHHHHHHHHHHHHHhcCC
Q 024637 210 GMVCPLVAVGLVTSCHLRLA-VILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 210 ~~~~~~i~~~l~~~~~~~~~-~~~~~~~~~i~~~~~~~~~ 248 (265)
+.+||.+.|++.|..|.+.. ...+....++..+..+..-
T Consensus 346 Aa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 346 AAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAG 385 (395)
T ss_pred HhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999998875544 3344444444444444443
No 195
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.34 E-value=2.8e-11 Score=95.63 Aligned_cols=147 Identities=16% Similarity=0.130 Sum_probs=125.4
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
+.+..+..++......+..+++..+|.++|++|||+.+.++.+..++..++...++++.++.++..+.+++.|+ .|...
T Consensus 109 ~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~ 187 (528)
T KOG0253|consen 109 GPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDS 187 (528)
T ss_pred chhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhH
Confidence 35556667777777889999999999999999999999999999999999999999999999999999999999 79999
Q ss_pred hhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCccccc
Q 024637 184 IYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 253 (265)
Q Consensus 184 ~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 253 (265)
++-.|..|...|+.-+=+. .+..+|.++...+.-.++.++||++-++.......+.+.+..+.+ |+.+
T Consensus 188 ~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~-ESpR 255 (528)
T KOG0253|consen 188 AIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVY-ESPR 255 (528)
T ss_pred HHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcc-cCcc
Confidence 9999999999999877666 777799999998888888899998888777766666666666654 6654
No 196
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.33 E-value=1.9e-10 Score=95.54 Aligned_cols=176 Identities=16% Similarity=0.032 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHH--HHHHhhhhHHHHHH-HHHHhhhchHHH
Q 024637 64 TLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDV--FIASLAELPGLILS-AIIVDKIGRKLS 140 (265)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-g~l~dr~grr~~ 140 (265)
.......++.+...+.....++|.+.++.+ .+..+++... .+..+..++.+++. ++..||+|||+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g-----------~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~ 71 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDG-----------APLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRS 71 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchh
Confidence 344555677777777777888999997664 7778888763 44566776777777 447889999988
Q ss_pred HHHHHHHH-HHHHHHHh-h--cch-hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHH
Q 024637 141 MVLMFVSA-CIFLLPLV-F--HQS-AVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPL 215 (265)
Q Consensus 141 ~~~~~~~~-~~~~~~~~-~--~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~ 215 (265)
.++...+. ..+...+. + ..+ ..+.+...++..++.....+....+..|..+++.++...+.......+|..+++.
T Consensus 72 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~ 151 (390)
T TIGR02718 72 WVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGA 151 (390)
T ss_pred HHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 65554332 22222222 1 222 2233333444445555566777778888888888888877777777899999999
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 216 VAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 216 i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
..+++.+..||+..|++.+++.++..+..++..++
T Consensus 152 ~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~ 186 (390)
T TIGR02718 152 GTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDR 186 (390)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999888877766666555544
No 197
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.32 E-value=7.6e-11 Score=90.37 Aligned_cols=151 Identities=13% Similarity=0.075 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q 024637 74 NVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLL 153 (265)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~ 153 (265)
.....|.+..|.|.+-++. +.+..+...+.+...++..+ +++.|.+.|++|.+.++.++.+...++..
T Consensus 14 ~~Gt~Y~Fs~yS~~Lk~~l-----------~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~ 81 (250)
T PF06813_consen 14 CSGTTYTFSAYSPQLKSRL-----------GYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYG 81 (250)
T ss_pred hcCcccchhhhhHHHHHHh-----------CCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 4446788888988887544 47778888888888888876 48899999999999999999999999988
Q ss_pred HHhh-------cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcch
Q 024637 154 PLVF-------HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHL 226 (265)
Q Consensus 154 ~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~ 226 (265)
.+.. ..+.|.+.+..++.+.+.+...+.......+.||. +||++.|+.-....+++.+-..+...+.+. +.
T Consensus 82 ~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~ 159 (250)
T PF06813_consen 82 LLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DP 159 (250)
T ss_pred HHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC-Ch
Confidence 7765 13455555555555555555555666666688985 699999999999999888888777766654 22
Q ss_pred hHHHHHHHHHHH
Q 024637 227 RLAVILFEVVFV 238 (265)
Q Consensus 227 ~~~~~~~~~~~~ 238 (265)
...+++.+....
T Consensus 160 ~~fll~la~~~~ 171 (250)
T PF06813_consen 160 SSFLLFLAVLPA 171 (250)
T ss_pred HHHHHHHHHHHH
Confidence 233333444433
No 198
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.30 E-value=1.7e-10 Score=96.92 Aligned_cols=202 Identities=11% Similarity=0.001 Sum_probs=136.0
Q ss_pred cccccc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHH
Q 024637 52 FFMLFS--RKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSG-DSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILS 128 (265)
Q Consensus 52 ~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (265)
++++++ ++..+.+..++..++...++++.+..|...+..+ ..+-++...+..........+...+.++...+.+++.
T Consensus 246 ~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l 325 (477)
T TIGR01301 246 FGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGM 325 (477)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444443 2334556666777777777777777776666532 2211111000000000012344455556666777888
Q ss_pred HHHHhhhch-HHHHHHHHHHHHHHHHHHhhcch---------------------hHHHHHHHHHHHHHHhhhhhhhhhhc
Q 024637 129 AIIVDKIGR-KLSMVLMFVSACIFLLPLVFHQS---------------------AVVTTLLLFGVRMCVTGTITVATIYA 186 (265)
Q Consensus 129 g~l~dr~gr-r~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~g~~~~~~~~~~~~~~ 186 (265)
.++.+|+|+ |++..++.++.+++++...+..+ .+..++...+.|+..+..+++.++++
T Consensus 326 ~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~ 405 (477)
T TIGR01301 326 EKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALA 405 (477)
T ss_pred HHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHH
Confidence 899999985 67778888888877777664221 26667777888999999999999999
Q ss_pred ccccCC--CcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHHHHHHHHhcCCccccc
Q 024637 187 PEIYPT--PARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH--LRLAVILFEVVFVLAIASSLLFPFETMG 253 (265)
Q Consensus 187 ~e~~p~--~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 253 (265)
++..|+ +..|..+|+.+.+..+.+++..+..|.+.+..| ....+.+.++..++++++.++..|+++.
T Consensus 406 s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 406 SIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999995 455999999999999999999988888666655 3345666667777888888888877653
No 199
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.30 E-value=2.4e-10 Score=95.72 Aligned_cols=140 Identities=12% Similarity=0.024 Sum_probs=93.3
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhch-HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGR-KLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVA 182 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 182 (265)
+.+..++++......++.++++++.|+++||+|| |+++.++.++..++.....+.++.+.+++.+++.+++.+...+..
T Consensus 34 g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 113 (418)
T TIGR00889 34 HFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALT 113 (418)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHH
Confidence 5888899999999999999999999999999965 777787777777777666677777777777777777655444443
Q ss_pred hhh----cc----cccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 183 TIY----AP----EIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 183 ~~~----~~----e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
.++ .. |......|.+..| .+|.+++|.+.+.+.. .+.+.++++.+++.++..++.+ ..||+
T Consensus 114 ~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~-~~~~~~f~~~~~~~~~~~~~~~-~~~e~ 182 (418)
T TIGR00889 114 NSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDI-ELSNIQLYITAGSSALLGVFAL-TLPDI 182 (418)
T ss_pred HHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcc-cchhHHHHHHHHHHHHHHHHHh-cCCCC
Confidence 332 22 2222222333333 4688889999887732 2223456666665555555444 34454
No 200
>PRK09669 putative symporter YagG; Provisional
Probab=99.27 E-value=1.2e-10 Score=98.40 Aligned_cols=169 Identities=11% Similarity=0.102 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhh----hchH-HHHHHHHHH
Q 024637 73 ANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDK----IGRK-LSMVLMFVS 147 (265)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~grr-~~~~~~~~~ 147 (265)
..+..+..+..|++.|.++.. +.+...++....+..+...+..++.|+++|| +||| +.++++.+.
T Consensus 20 ~~~~~~~~~~~~l~~~~t~~~----------gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~ 89 (444)
T PRK09669 20 ACNLVWQTVMLFLAYFYTDVF----------GLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIP 89 (444)
T ss_pred hhhHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHH
Confidence 334444455556666665443 6888899999999999999999999999998 7775 445566666
Q ss_pred HHHHHHHHhhcch------hHHHHHHHHHHHHHHhhhhhhhhhhccccc-CCCcchhhHHHHHhhhhHHHHHHHHHHHHH
Q 024637 148 ACIFLLPLVFHQS------AVVTTLLLFGVRMCVTGTITVATIYAPEIY-PTPARTTGFGVASSLGKVGGMVCPLVAVGL 220 (265)
Q Consensus 148 ~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~-p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l 220 (265)
.+++.+++...++ .++.++...+.+.+......+..++.+|+. ++++|.+..+....+..+|+.+++.+...+
T Consensus 90 ~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl 169 (444)
T PRK09669 90 FGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPL 169 (444)
T ss_pred HHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666655444322 234444445556566666677778899987 457799888888888888888887766555
Q ss_pred Hhhc-------chhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 221 VTSC-------HLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 221 ~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
.... +|...+.+.+++..+..+..++..+|.
T Consensus 170 ~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 170 VDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKER 207 (444)
T ss_pred HHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEe
Confidence 4332 445556666666666555555554443
No 201
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.26 E-value=7e-11 Score=99.47 Aligned_cols=161 Identities=10% Similarity=0.018 Sum_probs=107.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhh----h
Q 024637 60 LIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDK----I 135 (265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~ 135 (265)
..+.++...+++++.....|++..|+|.+.++.. +.+..++..+.+...++++++.+++|+++|| .
T Consensus 271 ~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~----------~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~ 340 (495)
T KOG2533|consen 271 KDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNG----------GYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIF 340 (495)
T ss_pred hchhHHHHHHHHHHHhhccccHHHHHHHHHHcCC----------CcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhH
Confidence 3467777888888889999999999999996632 4777788888899999999999999999999 5
Q ss_pred chHHHHHHHHHHHHHHH-HHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHH-HhhhhHHHHHH
Q 024637 136 GRKLSMVLMFVSACIFL-LPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVA-SSLGKVGGMVC 213 (265)
Q Consensus 136 grr~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~-~~~~~~g~~~~ 213 (265)
.+|........+..+.. ..+..................+.....+......++......|....... ....+.++.++
T Consensus 341 ~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~ 420 (495)
T KOG2533|consen 341 ARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAIS 420 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhh
Confidence 66666665555544444 44444443444444444444556666678888888887766554444444 34444555544
Q ss_pred HHH-HHHHHhhcchhHHH
Q 024637 214 PLV-AVGLVTSCHLRLAV 230 (265)
Q Consensus 214 ~~i-~~~l~~~~~~~~~~ 230 (265)
|.+ .+.....++|...+
T Consensus 421 ~~~~~~~~ap~y~~~~~f 438 (495)
T KOG2533|consen 421 GQLFRSLDAPRYGWGAVF 438 (495)
T ss_pred hhhcccccCcchhhhhHH
Confidence 444 33333445666666
No 202
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.24 E-value=4.4e-10 Score=95.67 Aligned_cols=171 Identities=12% Similarity=0.053 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHh----hhch-HHHHHHHH
Q 024637 71 FFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVD----KIGR-KLSMVLMF 145 (265)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~gr-r~~~~~~~ 145 (265)
.+...+.+..+..|++.|.++.. +.+...++....+..+...+..++.|+++| |+|| |+.++++.
T Consensus 15 ~~~~~~~~~~~~~~l~~yyt~v~----------Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~ 84 (473)
T PRK10429 15 AFGKDFAIGIVYMYLMYYYTDVV----------GLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGT 84 (473)
T ss_pred hhHHhHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhh
Confidence 33445555555666666665543 578888899999999999999999999999 5698 55566677
Q ss_pred HHHHHHHHHHhhcch------hHHHHHHHHHHHHHHhhhhhhhhhhccccc-CCCcchhhHHHHHhhhhHHHHHHHHHHH
Q 024637 146 VSACIFLLPLVFHQS------AVVTTLLLFGVRMCVTGTITVATIYAPEIY-PTPARTTGFGVASSLGKVGGMVCPLVAV 218 (265)
Q Consensus 146 ~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~-p~~~r~~~~g~~~~~~~~g~~~~~~i~~ 218 (265)
+..+++.+++...++ .++.++..++..++......+..++.+|+. ++++|....+....+.++|+.+.+.+..
T Consensus 85 i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~ 164 (473)
T PRK10429 85 LANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTL 164 (473)
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777655544221 223444445566677777788889999998 5788999998877777887777766655
Q ss_pred HHHhhc-------chhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 219 GLVTSC-------HLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 219 ~l~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
.+.+.. ++.....+.+++..+..+..++..+|.
T Consensus 165 ~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 165 PFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred HHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceec
Confidence 443322 233344445555455555555545554
No 203
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.23 E-value=1.3e-10 Score=95.98 Aligned_cols=140 Identities=16% Similarity=0.127 Sum_probs=123.8
Q ss_pred CCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhh
Q 024637 106 KDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIY 185 (265)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 185 (265)
.+...+........+.++.-++.+++.+|+|+-+++.+++.+..+-.+.+.+..|+|..+..-++.|+..+..|....+|
T Consensus 404 ~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY 483 (618)
T KOG3762|consen 404 IKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISY 483 (618)
T ss_pred cceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHH
Confidence 33444556666678889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcchhhHHHHHhhhh-HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHh
Q 024637 186 APEIYPTPARTTGFGVASSLGK-VGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSL 245 (265)
Q Consensus 186 ~~e~~p~~~r~~~~g~~~~~~~-~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 245 (265)
++...|++.|+++.++...... +|-.+|++++|.+.+.+|.+..|.++++.+++.+++..
T Consensus 484 ~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 484 ASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred HHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999986654 99999999999999999998888888888776655544
No 204
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.21 E-value=8.8e-11 Score=96.54 Aligned_cols=129 Identities=15% Similarity=0.190 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 024637 71 FFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACI 150 (265)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~ 150 (265)
.+......+....+.|.+.++.. +.+..+.+....+..+..+++.++.|+++||+|||+.+..+......
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~ 303 (366)
T TIGR00886 234 YSVTFGSFLGVSSIFAMFFKDQF----------GLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAM 303 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc----------CCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHH
Confidence 33344455566667777775443 46667777778888888899999999999999998887777666655
Q ss_pred HHHHHhh--cc--hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHH
Q 024637 151 FLLPLVF--HQ--SAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGG 210 (265)
Q Consensus 151 ~~~~~~~--~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~ 210 (265)
+..++.+ .. +.+..++...+..++.+...+..++.+++.+| +++|++.|+.+..+++|+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 304 GAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLGG 366 (366)
T ss_pred HHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCCC
Confidence 5544443 22 45555555556666777777888888999887 589999999998888763
No 205
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.19 E-value=1.9e-09 Score=89.71 Aligned_cols=119 Identities=11% Similarity=0.016 Sum_probs=84.4
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHH-HHHHHHHHHhh--cchhHHHHHHHHHHHHHHhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFV-SACIFLLPLVF--HQSAVVTTLLLFGVRMCVTGTIT 180 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~ 180 (265)
+.+....++......++.++++++.+++.||++++........ +..+....... ..+.+......++.+++.+...+
T Consensus 239 g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 318 (394)
T PRK11652 239 GLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFP 318 (394)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 4566666777777777888888889999999884433322222 22222222211 23445566667778888888889
Q ss_pred hhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhh
Q 024637 181 VATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTS 223 (265)
Q Consensus 181 ~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~ 223 (265)
....+..|.+| +.++++.++.+....+|+.+++.+.+.+...
T Consensus 319 ~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 319 LATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 99999999887 4689999999999999999999999887654
No 206
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.18 E-value=2.2e-09 Score=91.13 Aligned_cols=177 Identities=15% Similarity=0.086 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhc-----
Q 024637 62 RTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIG----- 136 (265)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g----- 136 (265)
....++...++..... +.....++.++++.. +.+..+++...+...+.-.+- +++|.++||++
T Consensus 26 ~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~l----------g~s~~~i~~~~sl~~lpw~~K-~l~g~l~D~~~i~G~r 93 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDL----------GLDGARYQRLVGLSSLGWALK-PFAGVMSDTFPLFGYT 93 (468)
T ss_pred hHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhc----------CCCHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCCcc
Confidence 3334444456666666 444444444553322 577788777777777776664 45999999997
Q ss_pred hHHHHHHHHHHHH-HHHHHHhhcch-hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhh---HHHHHhhhhHHHH
Q 024637 137 RKLSMVLMFVSAC-IFLLPLVFHQS-AVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTG---FGVASSLGKVGGM 211 (265)
Q Consensus 137 rr~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~---~g~~~~~~~~g~~ 211 (265)
||+.++++.++.. ++...+...++ .....+..++.+++.+.......++..|..+ +.+... .++.+...++|..
T Consensus 94 Rr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~ 172 (468)
T TIGR00788 94 KRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGL 172 (468)
T ss_pred chHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHH
Confidence 6777777776663 43333333333 3333346677788888888899999999998 544443 3344444458999
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 212 VCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 212 ~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
+++.+.|.+.+..+|+..+.+.+++.++..+...++ +|.+
T Consensus 173 vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~-~E~~ 212 (468)
T TIGR00788 173 ISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLS-KERR 212 (468)
T ss_pred HHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhc-cccc
Confidence 999999999999999999888888777664444444 4643
No 207
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.14 E-value=2.2e-10 Score=96.32 Aligned_cols=168 Identities=12% Similarity=0.063 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHh----hhchHHHHH-HHHHH
Q 024637 73 ANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVD----KIGRKLSMV-LMFVS 147 (265)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~grr~~~~-~~~~~ 147 (265)
...+.+.....+++.+..+.. +.++...+....+..+...+..++.|+++| |+|||+..+ ++...
T Consensus 12 ~~~~~~~~~~~~~~~f~~~~~----------gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~ 81 (428)
T PF13347_consen 12 GYNMIWSLLSSYLLYFYTDVL----------GLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAIL 81 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHH
Confidence 334444444445555554443 577788888888888888899999999999 789776554 67777
Q ss_pred HHHHHHHHhhc-c-------hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC-CcchhhHHHHHhhhhHHHHHHHHHHH
Q 024637 148 ACIFLLPLVFH-Q-------SAVVTTLLLFGVRMCVTGTITVATIYAPEIYPT-PARTTGFGVASSLGKVGGMVCPLVAV 218 (265)
Q Consensus 148 ~~~~~~~~~~~-~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~-~~r~~~~g~~~~~~~~g~~~~~~i~~ 218 (265)
.+++.+++... + ...+..+..++..++......+..++.+|+.+. ++|....+....+..+|..+...+.+
T Consensus 82 ~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~ 161 (428)
T PF13347_consen 82 LALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAP 161 (428)
T ss_pred HHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 77777777654 3 122345555666778888888889999999984 68999999999988888887777777
Q ss_pred HHHhhc-------chhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 219 GLVTSC-------HLRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 219 ~l~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
.+.+.. ++.....+.+++.++..++..+..+|
T Consensus 162 ~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 162 ILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred hhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 766543 35566666677777777777676666
No 208
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.12 E-value=3e-10 Score=96.34 Aligned_cols=122 Identities=11% Similarity=0.032 Sum_probs=104.8
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh----------cchhHHHHHHHHHHHH
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF----------HQSAVVTTLLLFGVRM 173 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~g~ 173 (265)
+.++...+......+++.+++..+.+++.+|++.|+++.++.++.+++.+.... .++.+......++.++
T Consensus 284 G~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~ 363 (468)
T TIGR00788 284 PGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEV 363 (468)
T ss_pred CCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHH
Confidence 688899999999999999999999999999999999999999988887755431 1333345555677788
Q ss_pred HHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcc
Q 024637 174 CVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH 225 (265)
Q Consensus 174 ~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~ 225 (265)
+.+..+.+...++++..|++.+|+.+++.+++.++|..+++.+++.+.+..|
T Consensus 364 ~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 364 LAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8888888889999999999999999999999999999999999999998877
No 209
>PRK11462 putative transporter; Provisional
Probab=99.12 E-value=4.7e-09 Score=89.00 Aligned_cols=167 Identities=11% Similarity=0.036 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhh----hchHHH-HHHHHHHHH
Q 024637 75 VFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDK----IGRKLS-MVLMFVSAC 149 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~grr~~-~~~~~~~~~ 149 (265)
+..+.....|+..|.++.. +.++..++....+.-+...+.-++.|+++|| +|||+. ++++.+..+
T Consensus 22 ~~~~~~~~~~l~~fyt~~~----------Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~ 91 (460)
T PRK11462 22 HIIFDNVMLYMMFFYTDIF----------GIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFG 91 (460)
T ss_pred hHHHHHHHHHHHHHHHHhh----------CCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHH
Confidence 3444444455555554433 6888888888888889999999999999996 687655 455667777
Q ss_pred HHHHHHhhcch------hHHHHHHHHHHHHHHhhhhhhhhhhcccccC-CCcchhhHHHHHhhhhHHHHHHHHHHHHHHh
Q 024637 150 IFLLPLVFHQS------AVVTTLLLFGVRMCVTGTITVATIYAPEIYP-TPARTTGFGVASSLGKVGGMVCPLVAVGLVT 222 (265)
Q Consensus 150 ~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p-~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~ 222 (265)
++.+++...++ ..+..+..++..++......+..++.+|+.+ .++|.+..++...++.+|+.+++.+...+..
T Consensus 92 i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~ 171 (460)
T PRK11462 92 IVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVN 171 (460)
T ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766654331 2334455556677777777888899999987 6789999999999999998888887766655
Q ss_pred hcc-------hhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 223 SCH-------LRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 223 ~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
..| |.....+++++.+++..++++..+|.
T Consensus 172 ~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~ 207 (460)
T PRK11462 172 LIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKER 207 (460)
T ss_pred HhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceec
Confidence 433 44444555555555555555544454
No 210
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.12 E-value=8.4e-09 Score=86.36 Aligned_cols=175 Identities=10% Similarity=-0.096 Sum_probs=101.4
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHH
Q 024637 51 SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAI 130 (265)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 130 (265)
+++.+++++ .++...+..+......+.+..+.|.+.++.. +.+..+.++.......+..+++.+.++
T Consensus 210 ~~~~ll~~~---~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~----------g~s~~~~gl~~~~~~~~~~i~~~l~~~ 276 (413)
T PRK15403 210 DFRNVFRNR---LFLTGAATLSLSYIPMMSWVAVSPVILIDAG----------GMTTSQFAWTQVPVFGAVIVANAIVAR 276 (413)
T ss_pred HHHHHHcCH---HHHHHHHHHHHHHHHHHHHHHhChHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555443 3333333334444555666667788876554 467777777776667777787888777
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHh-----hcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhh
Q 024637 131 IVDKIGRKLSMVLMFVSACIFLLPLV-----FHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSL 205 (265)
Q Consensus 131 l~dr~grr~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~ 205 (265)
+.++..+++.......+..++.+++. ..++.+..++..++.+++.+...+......-.-. ...+|++.++.+..
T Consensus 277 ~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~-~~~~G~a~a~~~~~ 355 (413)
T PRK15403 277 FVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSN-NLPKGTVSASLNMV 355 (413)
T ss_pred HhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHhccC-CCCCcHHHHHHHHH
Confidence 66544443333222222222221111 1233333455666677777777777664332111 22379999999888
Q ss_pred hhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 024637 206 GKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLA 240 (265)
Q Consensus 206 ~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~ 240 (265)
...+..+++...+++.+. +...++...++++.+.
T Consensus 356 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 356 ILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVI 389 (413)
T ss_pred HHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHH
Confidence 888888999999988766 5556666655554443
No 211
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.10 E-value=2.5e-08 Score=79.47 Aligned_cols=150 Identities=15% Similarity=0.035 Sum_probs=110.0
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
+.+..++..+.....+...+...+.|.++||+|||+..++.+++..++++... .+++..+++.+++.|++....++..-
T Consensus 65 g~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~-~~~~~~L~~GRvlgGiaTSLLfS~FE 143 (354)
T PF05631_consen 65 GFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH-SSNYPVLLLGRVLGGIATSLLFSAFE 143 (354)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 47778888888888899999999999999999999999999998888886443 57788899999999999988887766
Q ss_pred hhcc-cc----cCCCcchhhHHHHHhhhh-HHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHHHHHHHHhcCCcccccc
Q 024637 184 IYAP-EI----YPTPARTTGFGVASSLGK-VGGMVCPLVAVGLVTSCH--LRLAVILFEVVFVLAIASSLLFPFETMGR 254 (265)
Q Consensus 184 ~~~~-e~----~p~~~r~~~~g~~~~~~~-~g~~~~~~i~~~l~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 254 (265)
++.. |. +|.+..+..++......+ +-++.+..++-++.+..+ ...+|.....+..++.+++....+|..+.
T Consensus 144 sW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 144 SWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC
Confidence 6443 33 555555555554443333 344455555555566554 46788777777778877777766676543
No 212
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.09 E-value=2.1e-09 Score=88.05 Aligned_cols=144 Identities=15% Similarity=0.148 Sum_probs=85.9
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHH--HHHHHH-hh----cchhHH-HHHHHHHHHHHH
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSAC--IFLLPL-VF----HQSAVV-TTLLLFGVRMCV 175 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~--~~~~~~-~~----~~~~~~-~~~~~~~~g~~~ 175 (265)
|.+.++++...++..+..++..++.|.++||+|.||-++....+.. .+.+.. .+ ..+.+. .++.....++..
T Consensus 39 GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f 118 (412)
T PF01306_consen 39 GLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVF 118 (412)
T ss_dssp ---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6888999999999999999999999999999996665443332222 222221 11 122221 122222233444
Q ss_pred hhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 176 TGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 176 ~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
.+..++.-+++.+.- +..+.-+|=....+++|.++++.++|.+.+. +.+..+++..+..++..++.++..|+
T Consensus 119 ~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~~~~~~ 190 (412)
T PF01306_consen 119 NAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLLLLKPD 190 (412)
T ss_dssp TTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS---
T ss_pred cccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 444455555554432 3345667777899999999999999999875 45566665555545555555555443
No 213
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.09 E-value=1.6e-08 Score=83.84 Aligned_cols=124 Identities=16% Similarity=0.185 Sum_probs=95.8
Q ss_pred HHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHhhc
Q 024637 80 GAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIG-RKLSMVLMFVSACIFLLPLVFH 158 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-rr~~~~~~~~~~~~~~~~~~~~ 158 (265)
....+.|.++++. +.+..+++...++..+..+++.+++|+++||.+ +|+.+.+..++.++..+.....
T Consensus 20 ~~~p~~~~~L~~~-----------G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~ 88 (400)
T PF03825_consen 20 AFLPYLPLYLESR-----------GFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFS 88 (400)
T ss_pred HHHHHHHHHHHhC-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445567777555 488899999999999999999999999999985 6677777777777777666667
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHH
Q 024637 159 QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLV 216 (265)
Q Consensus 159 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i 216 (265)
.+.+.++...++..++.....|...++..+... .++.-+|-....+.+|-+++...
T Consensus 89 ~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~ 144 (400)
T PF03825_consen 89 SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALA 144 (400)
T ss_pred ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHH
Confidence 777777777777777777777888888877765 35666777778888887777554
No 214
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.05 E-value=3.4e-08 Score=78.37 Aligned_cols=158 Identities=13% Similarity=-0.014 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHh
Q 024637 77 SYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV 156 (265)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 156 (265)
...+....++.+-.+. +.+.+..+++.++..++..+.+++..++.+|+|.++.+..+.++.+++.++=.
T Consensus 27 ~itsvgPLL~~Ir~~~-----------gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~ 95 (395)
T COG2807 27 AITSVGPLLDEIRQDL-----------GLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRS 95 (395)
T ss_pred hhhhhhhhHHHHHHHh-----------cccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHh
Confidence 4455666677666443 58889999999999999999999999999999999999999999998887766
Q ss_pred hcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhc-chhHHHHHHHH
Q 024637 157 FHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSC-HLRLAVILFEV 235 (265)
Q Consensus 157 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~-~~~~~~~~~~~ 235 (265)
.. +...++....+.|.+.+..+...+..+-+.||++ -+..+|++.....+|+.+++.+...+.++. +|+..+.+.+.
T Consensus 96 ~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl 173 (395)
T COG2807 96 LG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWAL 173 (395)
T ss_pred cc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHH
Confidence 55 5667778888899999999999999999999986 688999999999999999999999998887 79999999988
Q ss_pred HHHHHHHHHhcC
Q 024637 236 VFVLAIASSLLF 247 (265)
Q Consensus 236 ~~~i~~~~~~~~ 247 (265)
..+++++..+.-
T Consensus 174 ~allAl~~WlPq 185 (395)
T COG2807 174 LALLALLIWLPQ 185 (395)
T ss_pred HHHHHHHHHhhh
Confidence 888877665544
No 215
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.03 E-value=1.2e-08 Score=85.56 Aligned_cols=136 Identities=23% Similarity=0.255 Sum_probs=111.6
Q ss_pred HHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcch
Q 024637 117 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPART 196 (265)
Q Consensus 117 ~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~ 196 (265)
.++..++.+++.|.++||+|||..+.+....+.+..+...+.. |+.++..-+.| +.+..++...+++++....+.|.
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~~~~l~g-~~~~~~s~~~a~vadis~~~~R~ 147 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFLLLGLSG-GFSAIFSVGFAYVADISSEEERS 147 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhhhccccc-chhhhhhhhhhheeeccchhHHH
Confidence 3577788899999999999999999999888888877766654 33333222222 34556688999999999999999
Q ss_pred hhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCccccccc
Q 024637 197 TGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRE 255 (265)
Q Consensus 197 ~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 255 (265)
...|+.+.....+..++|.+.+.+....|....+.+..+..++..+..++..||+...+
T Consensus 148 ~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~ 206 (463)
T KOG2816|consen 148 SSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEK 206 (463)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcc
Confidence 99999999999999999999999999999988998888888888888888888876543
No 216
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.00 E-value=4.3e-09 Score=87.49 Aligned_cols=148 Identities=16% Similarity=0.158 Sum_probs=111.4
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhch-HHHHHHHHHHHHHHHHHHh-h---cc-hhHHHHHHHHHHHHHHhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGR-KLSMVLMFVSACIFLLPLV-F---HQ-SAVVTTLLLFGVRMCVTG 177 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr-r~~~~~~~~~~~~~~~~~~-~---~~-~~~~~~~~~~~~g~~~~~ 177 (265)
+.+.+..++......++..+++++.|+...|.+. |+.++.+.+++.++.++.. . .+ ..+++++.+++.|++.+.
T Consensus 67 ~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n 146 (488)
T KOG2325|consen 67 TATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN 146 (488)
T ss_pred CCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc
Confidence 3556777889999999999999999999999885 7777888888888877663 2 33 577888999999988665
Q ss_pred hhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhc-------------chhHHHHHHHHHHHHHHHHH
Q 024637 178 TITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSC-------------HLRLAVILFEVVFVLAIASS 244 (265)
Q Consensus 178 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~-------------~~~~~~~~~~~~~~i~~~~~ 244 (265)
. +..-.|+++..-.+.|.++++.......+|.++||.+...+.... -+..+-++.+++.++..++.
T Consensus 147 ~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i 225 (488)
T KOG2325|consen 147 F-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVII 225 (488)
T ss_pred H-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHH
Confidence 4 788889998777778888888888777777777777766554211 12355667777777777777
Q ss_pred hcCCcccc
Q 024637 245 LLFPFETM 252 (265)
Q Consensus 245 ~~~~~~~~ 252 (265)
.++.+|..
T Consensus 226 ~~~f~E~~ 233 (488)
T KOG2325|consen 226 LFFFKEVY 233 (488)
T ss_pred Hhheeecc
Confidence 76665543
No 217
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.99 E-value=4.9e-08 Score=83.14 Aligned_cols=140 Identities=12% Similarity=0.006 Sum_probs=103.4
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhch-----HHH--HHHHHHHHHHHHHHHhh---------cchhHHHHHHHHHHHH
Q 024637 110 LYVDVFIASLAELPGLILSAIIVDKIGR-----KLS--MVLMFVSACIFLLPLVF---------HQSAVVTTLLLFGVRM 173 (265)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~g~l~dr~gr-----r~~--~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~ 173 (265)
..+..++..+.-++..++..++..|.+| +.. +.++.++.+++.+.+.+ ..+.++.+...++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 4455565555555665554443333333 333 36677777777666553 3577888888999999
Q ss_pred HHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCc
Q 024637 174 CVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPF 249 (265)
Q Consensus 174 ~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 249 (265)
+-....|...+++.+..|++.||+.+|+......+|..+++.+.....+..++...+...+++.++..++.+++.|
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999887766667777777777777666666555543
No 218
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.97 E-value=2.7e-08 Score=87.05 Aligned_cols=143 Identities=13% Similarity=0.130 Sum_probs=107.5
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhh-hchHHHHHHHHHHHHHHHHHHhhcch--------hHHHHHHHHHHHHH
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDK-IGRKLSMVLMFVSACIFLLPLVFHQS--------AVVTTLLLFGVRMC 174 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~g~~ 174 (265)
+.+...+......+....-+..+++|+++|+ +||++.+.++.++..++.+++..... ....++...+..+|
T Consensus 19 g~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G 98 (654)
T TIGR00926 19 GFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALG 98 (654)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhh
Confidence 3555555555555555666778899999997 69999999999998888877765211 12345566677788
Q ss_pred HhhhhhhhhhhcccccCCC---cchhhHHHHHhhhhHHHHHHHHHHHHHHhhc-------chhHHHHHHHHHHHHHHHHH
Q 024637 175 VTGTITVATIYAPEIYPTP---ARTTGFGVASSLGKVGGMVCPLVAVGLVTSC-------HLRLAVILFEVVFVLAIASS 244 (265)
Q Consensus 175 ~~~~~~~~~~~~~e~~p~~---~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~-------~~~~~~~~~~~~~~i~~~~~ 244 (265)
.|+.-+...+...|.++.+ .|-..+.+.+...++|+.+++.+.+++.+.. +|...|.+.+++.+++.++.
T Consensus 99 ~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 99 TGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVF 178 (654)
T ss_pred ccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHH
Confidence 8888899999999988754 4778888899999999999999999987543 47777777777777666655
Q ss_pred hc
Q 024637 245 LL 246 (265)
Q Consensus 245 ~~ 246 (265)
..
T Consensus 179 ~~ 180 (654)
T TIGR00926 179 MA 180 (654)
T ss_pred HH
Confidence 44
No 219
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.94 E-value=1.4e-08 Score=82.65 Aligned_cols=193 Identities=16% Similarity=0.067 Sum_probs=131.3
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHH
Q 024637 49 FSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILS 128 (265)
Q Consensus 49 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (265)
..+.++++++ +++++..+++.+....+|+....+...+... +.+....++......+++++++++.
T Consensus 256 ~~si~~~~~n---~~F~il~~~ygi~~g~F~~l~~~l~~~l~~s-----------gY~~~~aG~ig~l~iv~Gmlga~~~ 321 (480)
T KOG2563|consen 256 PKSIKSCFKN---RQFIILAICYGIGLGLFNSLSTLLNLALCPS-----------GYEGVFAGYIGALMIVAGMLGALAS 321 (480)
T ss_pred HHHHHHHHcC---ccHHHHHHHHhhhHHHHHHHHHHhhhccccc-----------cCCccccchhHHHHHHHHHHHHHHH
Confidence 3456666654 4555666666666666666665555333222 3444677888888889999999999
Q ss_pred HHHHhhhchH-HHHHHHHHHHHHHHHHHhh----cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHH
Q 024637 129 AIIVDKIGRK-LSMVLMFVSACIFLLPLVF----HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVAS 203 (265)
Q Consensus 129 g~l~dr~grr-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~ 203 (265)
|.+.||.+.- .+.++......++...+.. ....+.+.....+.|++..+..|+..-+..|..-+..-++..|+.+
T Consensus 322 gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~ 401 (480)
T KOG2563|consen 322 GIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLN 401 (480)
T ss_pred HhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEE
Confidence 9999998654 4444444444444222221 2334455666777888888888999999999877777889999999
Q ss_pred hhhhHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHHHHHhcCCccccccc
Q 024637 204 SLGKVGGMVCPLVAVGLVTSCH----LRLAVILFEVVFVLAIASSLLFPFETMGRE 255 (265)
Q Consensus 204 ~~~~~g~~~~~~i~~~l~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 255 (265)
..+.+-+++-.++.+...+..+ +...-+.....+.+.+++..++.|+.++.+
T Consensus 402 ~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~ 457 (480)
T KOG2563|consen 402 LSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRLR 457 (480)
T ss_pred eehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhHh
Confidence 9999999999999998888776 444445555556666666677765544433
No 220
>PRK09848 glucuronide transporter; Provisional
Probab=98.89 E-value=1.2e-07 Score=80.34 Aligned_cols=115 Identities=11% Similarity=0.128 Sum_probs=73.7
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhh----chHHHH-HHHHHHHHHHHHHHhh-c----ch--hHHHHHHHHHH
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKI----GRKLSM-VLMFVSACIFLLPLVF-H----QS--AVVTTLLLFGV 171 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----grr~~~-~~~~~~~~~~~~~~~~-~----~~--~~~~~~~~~~~ 171 (265)
+.+...++....+..+...+..++.|+++||. |||+.. .++.+...+..+++.. . .+ .++.++...+.
T Consensus 40 gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (448)
T PRK09848 40 GVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGL 119 (448)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHH
Confidence 57888999999999999999999999999986 777754 4555544444433321 1 11 22233444556
Q ss_pred HHHHhhhhhhhhhhcccccCC-CcchhhHHHHHhhhh-----HHHHHHHHHHH
Q 024637 172 RMCVTGTITVATIYAPEIYPT-PARTTGFGVASSLGK-----VGGMVCPLVAV 218 (265)
Q Consensus 172 g~~~~~~~~~~~~~~~e~~p~-~~r~~~~g~~~~~~~-----~g~~~~~~i~~ 218 (265)
+++.+...++..++..++.+. ++|....+.-....+ ++..++|.+.+
T Consensus 120 ~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~ 172 (448)
T PRK09848 120 GLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKN 172 (448)
T ss_pred HHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666777777777777776654 568776665544333 34445555544
No 221
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.81 E-value=3.1e-07 Score=76.42 Aligned_cols=171 Identities=15% Similarity=0.098 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhh----hchHH-HHHHHHH
Q 024637 72 FANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDK----IGRKL-SMVLMFV 146 (265)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~grr~-~~~~~~~ 146 (265)
+..+..+-....|+..|.++.. +.++..++.++.+.-+...+.-++.|.++|| +||++ .++++.+
T Consensus 22 ~~~~~~~~~~~~yLl~fYTdv~----------Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~i 91 (467)
T COG2211 22 FASNFAFGIVVLYLLFFYTDVF----------GLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAI 91 (467)
T ss_pred hHHHHHHHHHHHHHHHHHhccc----------CCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhH
Confidence 3344445555667777776665 6888888888888888899999999999996 67655 4566767
Q ss_pred HHHHHHHHHhhcc------hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC-CcchhhHHHHHhhhhHHHHHHHHHHHH
Q 024637 147 SACIFLLPLVFHQ------SAVVTTLLLFGVRMCVTGTITVATIYAPEIYPT-PARTTGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 147 ~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~-~~r~~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
..++...++..++ +....++...+.+++......+..++.+|+.+. ++|.+..+.-+.+.++|+.+..++.+.
T Consensus 92 p~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~p 171 (467)
T COG2211 92 PFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPP 171 (467)
T ss_pred HHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777776644 244556667778888888888889999999864 679999999999999999888888887
Q ss_pred HHhhc-------chhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 220 LVTSC-------HLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 220 l~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
+.... |+.....+++++.++..+++++-.+|+.
T Consensus 172 lv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~ 211 (467)
T COG2211 172 LVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERV 211 (467)
T ss_pred HHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 77543 4445555555555556666665554543
No 222
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.81 E-value=4.2e-07 Score=73.73 Aligned_cols=121 Identities=9% Similarity=-0.000 Sum_probs=104.3
Q ss_pred CCCCCchHHHHHHHHHhhhhHHHHHHHHHHh-hhchHHHHHHHHHHHHHHHHHHhh---cchhHHHHHHHHHHHHHHhhh
Q 024637 103 DKSKDNSLYVDVFIASLAELPGLILSAIIVD-KIGRKLSMVLMFVSACIFLLPLVF---HQSAVVTTLLLFGVRMCVTGT 178 (265)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~grr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~ 178 (265)
++++..+...+......+.++|..+.|++.. |.++++...+++..+.++..++.. ..+.+.+....++.|++.|..
T Consensus 239 fgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f 318 (403)
T PF03209_consen 239 FGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLF 318 (403)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHH
Confidence 3788899999999999999999999998776 678888888888888877766554 566788888899999999999
Q ss_pred hhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhh
Q 024637 179 ITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTS 223 (265)
Q Consensus 179 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~ 223 (265)
.....+...++.+++..|+.+|.-.....++..++.+++|.+.|.
T Consensus 319 ~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 319 TVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred HHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888889999999999999999999999999999999999988774
No 223
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.81 E-value=2.1e-07 Score=79.83 Aligned_cols=138 Identities=8% Similarity=-0.091 Sum_probs=91.7
Q ss_pred HHHHHHHHhhhhHHHHHH----HHHHhhhchHHHHHHHHHHHHHHHHHHhhcch---------hHHHHHHHHHHHHHHhh
Q 024637 111 YVDVFIASLAELPGLILS----AIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS---------AVVTTLLLFGVRMCVTG 177 (265)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~----g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~g~~~~~ 177 (265)
.+..++..+..++..++. +++.+|.+..+.+.++.++.+++.+.+....+ .++.+...++.+++-..
T Consensus 319 ~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~ 398 (500)
T PRK09584 319 EQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELM 398 (500)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHH
Confidence 444444554444444444 55566666667788899999998877665332 45677788889999999
Q ss_pred hhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHh----------hcchhHHHHHHHHHHHHHHHHHhcC
Q 024637 178 TITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVT----------SCHLRLAVILFEVVFVLAIASSLLF 247 (265)
Q Consensus 178 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~----------~~~~~~~~~~~~~~~~i~~~~~~~~ 247 (265)
..|...+++.+..|++.||..+|+......+|..++..+...... ..+....|...+++.++.+++.+..
T Consensus 399 ~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~ 478 (500)
T PRK09584 399 ISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLT 478 (500)
T ss_pred HhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999997766665666555555432110 1124456666666655444444443
Q ss_pred C
Q 024637 248 P 248 (265)
Q Consensus 248 ~ 248 (265)
.
T Consensus 479 ~ 479 (500)
T PRK09584 479 A 479 (500)
T ss_pred H
Confidence 3
No 224
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.79 E-value=2.1e-07 Score=75.94 Aligned_cols=119 Identities=16% Similarity=0.020 Sum_probs=88.9
Q ss_pred CCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhc------chhH--HHHHHHHHHHHHHhh
Q 024637 106 KDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH------QSAV--VTTLLLFGVRMCVTG 177 (265)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~g~~~~~ 177 (265)
+.....|...++++..++..+.+-|+.||+|-|....++....+++..+=..+ +..+ .......+.+...-.
T Consensus 77 s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~F 156 (480)
T KOG2563|consen 77 SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPF 156 (480)
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhH
Confidence 55667788999999999999999999999999999999999999988765542 2233 333444444433333
Q ss_pred hhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhc
Q 024637 178 TITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSC 224 (265)
Q Consensus 178 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~ 224 (265)
......-...-+||+++|+++..+..+...+|.+++-++.+.+..+.
T Consensus 157 im~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 157 ILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred hhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 32333344556799999999999998888899999888888777553
No 225
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.75 E-value=4.2e-07 Score=77.67 Aligned_cols=138 Identities=11% Similarity=-0.055 Sum_probs=97.5
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHH-------HHHHHHHHHHHHHHHHh-----h-----cchhHHHHHHHHHHHH
Q 024637 111 YVDVFIASLAELPGLILSAIIVDKIGRKL-------SMVLMFVSACIFLLPLV-----F-----HQSAVVTTLLLFGVRM 173 (265)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~-------~~~~~~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~~g~ 173 (265)
.+...+..+..++.+++.+++.||+++|+ -+.++.++.+++.+.+. . ..+.++.+...++.++
T Consensus 312 ~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~ 391 (489)
T PRK10207 312 VSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSL 391 (489)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 34444444556677888899999999886 36667677666654321 1 1345667777888999
Q ss_pred HHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHh---------hc-chhHHHHHHHHHHHHHHHH
Q 024637 174 CVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVT---------SC-HLRLAVILFEVVFVLAIAS 243 (265)
Q Consensus 174 ~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~---------~~-~~~~~~~~~~~~~~i~~~~ 243 (265)
+.+...++...++.+..|++.++.++|+.+....+|+.++..+...... .. ...+.|...++..++..++
T Consensus 392 Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~ 471 (489)
T PRK10207 392 GELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVV 471 (489)
T ss_pred HHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999888887764421 01 1234555566555555555
Q ss_pred HhcCC
Q 024637 244 SLLFP 248 (265)
Q Consensus 244 ~~~~~ 248 (265)
.++..
T Consensus 472 ~~~~~ 476 (489)
T PRK10207 472 MALMV 476 (489)
T ss_pred HHHHH
Confidence 54443
No 226
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.71 E-value=3.1e-08 Score=79.45 Aligned_cols=140 Identities=14% Similarity=0.074 Sum_probs=106.2
Q ss_pred chHHHHHHHHHhhhhHHHHHHHHHHhhhc--hHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhh
Q 024637 108 NSLYVDVFIASLAELPGLILSAIIVDKIG--RKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIY 185 (265)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 185 (265)
-..++.+.-..+...++..+.|.+.||++ |....+.+.+..+.+.....+.++...+++-.+..+++.+...+.....
T Consensus 306 w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~ 385 (464)
T KOG3764|consen 306 WEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPT 385 (464)
T ss_pred cceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhh
Confidence 36677777778889999999999999999 6555666777777777777777777776666666666666655554444
Q ss_pred cccccCC---C---cchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcC
Q 024637 186 APEIYPT---P---ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 247 (265)
Q Consensus 186 ~~e~~p~---~---~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 247 (265)
..++... + .-|...++......+|.++||.++|.+.+..|+.|...+.++..++-.-+...+
T Consensus 386 l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 386 LGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred hHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444433 3 567888999999999999999999999999999999888888877666555444
No 227
>PTZ00207 hypothetical protein; Provisional
Probab=98.66 E-value=3e-07 Score=79.40 Aligned_cols=138 Identities=9% Similarity=0.058 Sum_probs=98.0
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhch---------HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhh
Q 024637 113 DVFIASLAELPGLILSAIIVDKIGR---------KLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVAT 183 (265)
Q Consensus 113 ~~~~~~~~~~~~~~~~g~l~dr~gr---------r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (265)
..++.++++.+|.+..|.+....-+ --.+.+..+ +.++.+++++......+++..++.|++.|..+++..
T Consensus 396 ~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~ 474 (591)
T PTZ00207 396 LTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIA 474 (591)
T ss_pred ehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHH
Confidence 6777889999999999988722222 222334444 556555555543335688888999999999999999
Q ss_pred hhcccccCCCcchhhHHHHHhhhhHHHHHH-HHHHHHHHhhcc-------------hhHHHHHHHHHHHHHHHHHhcCCc
Q 024637 184 IYAPEIYPTPARTTGFGVASSLGKVGGMVC-PLVAVGLVTSCH-------------LRLAVILFEVVFVLAIASSLLFPF 249 (265)
Q Consensus 184 ~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~-~~i~~~l~~~~~-------------~~~~~~~~~~~~~i~~~~~~~~~~ 249 (265)
..++|+|. ++-|+-+.+.....-+|+.+- -.++|.+.|.-. .+.+|++++++++++.+....+.-
T Consensus 475 ~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~ 553 (591)
T PTZ00207 475 LVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHL 553 (591)
T ss_pred HHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheee
Confidence 99999999 777777777777666776665 567777776422 357888999999888877665543
Q ss_pred ccc
Q 024637 250 ETM 252 (265)
Q Consensus 250 ~~~ 252 (265)
+++
T Consensus 554 R~r 556 (591)
T PTZ00207 554 QYR 556 (591)
T ss_pred ehH
Confidence 443
No 228
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.58 E-value=2.9e-06 Score=71.44 Aligned_cols=146 Identities=20% Similarity=0.172 Sum_probs=104.6
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhh---c--hHHHHHHHHHHHHHHHHHHhh----cchhHHHHHHHHHHHHH
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKI---G--RKLSMVLMFVSACIFLLPLVF----HQSAVVTTLLLFGVRMC 174 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~---g--rr~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~ 174 (265)
+.++.+......+..+. ...-++.|.++|-+ | ||+-++++.++..++.+.+.. ..+.....++.++..++
T Consensus 21 ~ls~~~~~~~~~~~~lP-w~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g 99 (433)
T PF03092_consen 21 GLSPAQLQRLSSLASLP-WSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFG 99 (433)
T ss_pred CCCHHHHHHHHHHHhCc-hHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHH
Confidence 56666665555554433 45678999999986 3 555566677776555555544 23444555666777778
Q ss_pred HhhhhhhhhhhcccccCC--CcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 175 VTGTITVATIYAPEIYPT--PARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 175 ~~~~~~~~~~~~~e~~p~--~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
......+.-+++.|.... +.||.-.+.......+|++++..+.|.+.+..+.+..+.+.+.+..+..+..+++.+|
T Consensus 100 ~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 100 YAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 888888888888888632 2377888888888889999999999999999888888888877777776666666655
No 229
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.58 E-value=8.3e-07 Score=71.08 Aligned_cols=120 Identities=18% Similarity=0.085 Sum_probs=95.8
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhc--hHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIG--RKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITV 181 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 181 (265)
+.++.+.+-+....++...+......+..||.. -+-.+..+..++.-..+.+........++....+..+......+.
T Consensus 293 g~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~ 372 (451)
T KOG2615|consen 293 GYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTC 372 (451)
T ss_pred CCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHH
Confidence 577777777777777777777777777777765 555666666666666666666777777777788888877777788
Q ss_pred hhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhh
Q 024637 182 ATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTS 223 (265)
Q Consensus 182 ~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~ 223 (265)
...++....|...||+..|+..+.+.++-++||.+.|.+...
T Consensus 373 Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 373 LTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 899999999999999999999999999999999999877653
No 230
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.57 E-value=7.9e-07 Score=77.42 Aligned_cols=161 Identities=14% Similarity=0.122 Sum_probs=107.1
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHH-hhhhHHHHHH
Q 024637 50 SSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIAS-LAELPGLILS 128 (265)
Q Consensus 50 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 128 (265)
.+++.++++ +.++...+...+....+.++..|+|.|++.+. +.++..+..+....+ .+..+|.+++
T Consensus 383 ~s~~~ll~N---~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qf----------g~sas~An~l~G~i~vp~~~~Gi~lG 449 (735)
T KOG3626|consen 383 KSIKRLLSN---PIFMLVVLASVIESLAITGYITFLPKYLETQF----------GISASLANILTGSIGVPAAAVGIFLG 449 (735)
T ss_pred HHHHHHhcC---chHHHHHHHHHHHHHHHhhHHHhhHHHHHHHc----------CCCHHHHHHHhhhhhhhhhhhhhhcc
Confidence 344555543 45556666677777888889999999998777 677777766664444 4556788899
Q ss_pred HHHHhhh--chHHHHHHHHHHHHHHHHH---Hhhcc--------------------------------------------
Q 024637 129 AIIVDKI--GRKLSMVLMFVSACIFLLP---LVFHQ-------------------------------------------- 159 (265)
Q Consensus 129 g~l~dr~--grr~~~~~~~~~~~~~~~~---~~~~~-------------------------------------------- 159 (265)
|++..|+ +.|....+..+...++.+. ..+..
T Consensus 450 G~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVC 529 (735)
T KOG3626|consen 450 GLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVC 529 (735)
T ss_pred ceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCccc
Confidence 9999986 4555444444443333332 22200
Q ss_pred -------------------------------------------------------hhHHHHHHHHHHHHHHhhhhhhhhh
Q 024637 160 -------------------------------------------------------SAVVTTLLLFGVRMCVTGTITVATI 184 (265)
Q Consensus 160 -------------------------------------------------------~~~~~~~~~~~~g~~~~~~~~~~~~ 184 (265)
....+++..++..+..+....+.+.
T Consensus 530 g~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~ 609 (735)
T KOG3626|consen 530 GENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGML 609 (735)
T ss_pred CCCCCEEeChhhhCCcccccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceE
Confidence 0112233333333344444466777
Q ss_pred hcccccCCCcchhhHHHHHhhhh-HHHHHHHHHHHHHHhh
Q 024637 185 YAPEIYPTPARTTGFGVASSLGK-VGGMVCPLVAVGLVTS 223 (265)
Q Consensus 185 ~~~e~~p~~~r~~~~g~~~~~~~-~g~~~~~~i~~~l~~~ 223 (265)
++-..+|++.|..++|+..++.+ +|.+-+|++.|+++|.
T Consensus 610 i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 610 IVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred EEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhh
Confidence 77788999999999999998888 7899999999999985
No 231
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.55 E-value=8e-06 Score=69.39 Aligned_cols=143 Identities=19% Similarity=0.228 Sum_probs=100.3
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHH-HHHHHHHHHHHHhh--cchhHHHHHHHHHHHHHHhhhhhhhhhhcc
Q 024637 111 YVDVFIASLAELPGLILSAIIVDKIGRKLSMVL-MFVSACIFLLPLVF--HQSAVVTTLLLFGVRMCVTGTITVATIYAP 187 (265)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 187 (265)
+...++..+...+..++.|.++|+-++||.++. ..++..++..++.+ ..+++...++.++..++.+.......++.+
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP 152 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLP 152 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 455667777888889999999999987766554 44444455555555 333445555566666778888888999999
Q ss_pred cccCCCcc--------------------------hhhHHHHHhhhhHHHHHHHHHHHHHHhhc--------chhHHHHHH
Q 024637 188 EIYPTPAR--------------------------TTGFGVASSLGKVGGMVCPLVAVGLVTSC--------HLRLAVILF 233 (265)
Q Consensus 188 e~~p~~~r--------------------------~~~~g~~~~~~~~g~~~~~~i~~~l~~~~--------~~~~~~~~~ 233 (265)
|+.+++.+ ++..+.....+++|+.+.-.+.-.+.... ..+..+.+.
T Consensus 153 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~ 232 (477)
T PF11700_consen 153 DLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIV 232 (477)
T ss_pred hhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHH
Confidence 99998888 99999999999999988777665554322 235556666
Q ss_pred HHHHHHHHHHHhcCCccccc
Q 024637 234 EVVFVLAIASSLLFPFETMG 253 (265)
Q Consensus 234 ~~~~~i~~~~~~~~~~~~~~ 253 (265)
++..++..+..++..|++++
T Consensus 233 a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 233 ALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHhCCCCCC
Confidence 66666666665655555543
No 232
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.54 E-value=1e-05 Score=64.22 Aligned_cols=125 Identities=20% Similarity=0.215 Sum_probs=93.4
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcch--hHHHHHHHHHHHHHHhhhhhhhhhhc
Q 024637 109 SLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS--AVVTTLLLFGVRMCVTGTITVATIYA 186 (265)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~ 186 (265)
..++......+...++.++.|++.||+|||+.+..+.....++.+...+..+ .+..++.+...|++.+...+...+++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 119 (338)
T COG0477 40 LYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALL 119 (338)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4567777777888888899999999999998877777654444444444443 66677777778888888889999999
Q ss_pred ccccCC-CcchhhHHHHHh-hhhHHHHHHHHHHHHHHhh--cchhHHHHHH
Q 024637 187 PEIYPT-PARTTGFGVASS-LGKVGGMVCPLVAVGLVTS--CHLRLAVILF 233 (265)
Q Consensus 187 ~e~~p~-~~r~~~~g~~~~-~~~~g~~~~~~i~~~l~~~--~~~~~~~~~~ 233 (265)
.|.+|. +.|+...+.... ...+|..++|.+.+.+... .+|+..+...
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (338)
T COG0477 120 SEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLA 170 (338)
T ss_pred HHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 999998 678888888887 4668888888777766654 3555533333
No 233
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.54 E-value=6e-06 Score=71.25 Aligned_cols=153 Identities=14% Similarity=0.127 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHH
Q 024637 62 RTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSM 141 (265)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 141 (265)
|.+...+++.+...+.+|+...+.|......+..| ..+....++.....+++..++.++.|.+..+++|-|..
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d-------~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~ 382 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSD-------PISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQ 382 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC-------CcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHH
Confidence 34555556666677778888777777764443111 11112456666777788888999999999988865554
Q ss_pred -HHHHHHHHHHHHHHhh--cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHH
Q 024637 142 -VLMFVSACIFLLPLVF--HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAV 218 (265)
Q Consensus 142 -~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~ 218 (265)
+++.+++.+++-+++. .++....+...++.+++.|....+....++-..|.+.-|++.|+..++..+|+.+|..+..
T Consensus 383 li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 383 LIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred HHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 4565555544333333 3444455677788889998888888888888899999999999999999999999988876
Q ss_pred HHH
Q 024637 219 GLV 221 (265)
Q Consensus 219 ~l~ 221 (265)
.+.
T Consensus 463 ~I~ 465 (599)
T PF06609_consen 463 AIF 465 (599)
T ss_pred HHH
Confidence 554
No 234
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.53 E-value=1.4e-06 Score=76.72 Aligned_cols=160 Identities=10% Similarity=0.083 Sum_probs=106.8
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHh-hhhHHHHHHH
Q 024637 51 SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASL-AELPGLILSA 129 (265)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g 129 (265)
.++.++++ +.++...+..+.....++++..|+|.|+++.. +.+..++++......+ +.+++.+++|
T Consensus 322 ~~~~Ll~n---~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~----------g~s~~~ag~l~~~~~i~~~~vG~~l~G 388 (633)
T TIGR00805 322 IIKRLLCN---PIYMLVILAQVIDSLAFNGYITFLPKYLENQY----------GISSAEANFLIGVVNLPAAGLGYLIGG 388 (633)
T ss_pred HHHHHHcC---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCcHHHHHHHhhhhhhhHHHHHHhhhh
Confidence 34455543 34455555566667778888889999997655 5777777777766555 5678999999
Q ss_pred HHHhhhc--hHHHHHHHHHHHHHHHHHHh------------------------------h-------cc-----------
Q 024637 130 IIVDKIG--RKLSMVLMFVSACIFLLPLV------------------------------F-------HQ----------- 159 (265)
Q Consensus 130 ~l~dr~g--rr~~~~~~~~~~~~~~~~~~------------------------------~-------~~----------- 159 (265)
+++||++ .|+.+.++.++..++.+... . ..
T Consensus 389 ~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~ 468 (633)
T TIGR00805 389 FIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNG 468 (633)
T ss_pred heeeeecccHHHHHHHHHHHHHHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCC
Confidence 9999987 45666666555555433211 0 00
Q ss_pred -----------------------------------------------h-hHHHHHHHHHHHHHHhhhhhhhhhhcccccC
Q 024637 160 -----------------------------------------------S-AVVTTLLLFGVRMCVTGTITVATIYAPEIYP 191 (265)
Q Consensus 160 -----------------------------------------------~-~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p 191 (265)
+ ...+++..++..+..+....+....+-..+|
T Consensus 469 ~tY~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~ 548 (633)
T TIGR00805 469 LAYLSPCHAGCSMSVGTGSNMVYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVN 548 (633)
T ss_pred CEEECccccCCCCccCCCCcceecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccC
Confidence 0 1112222233333333344555666677899
Q ss_pred CCcchhhHHHHHhhhh-HHHHHHHHHHHHHHhh
Q 024637 192 TPARTTGFGVASSLGK-VGGMVCPLVAVGLVTS 223 (265)
Q Consensus 192 ~~~r~~~~g~~~~~~~-~g~~~~~~i~~~l~~~ 223 (265)
+++|+.+.|+...+.+ +|.+-+|++.|++.|.
T Consensus 549 ~~~rs~alg~~~~~~rllg~iP~pi~fG~~iD~ 581 (633)
T TIGR00805 549 PEEKSLAIGLQWLCMRVFATIPAPILFGLLIDV 581 (633)
T ss_pred cccchHHhhHHHHHHHHhcCCChhHHHhhhhhc
Confidence 9999999999999988 7889999999999974
No 235
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.50 E-value=2.9e-05 Score=55.33 Aligned_cols=110 Identities=14% Similarity=0.065 Sum_probs=89.0
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 024637 111 YVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIY 190 (265)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~ 190 (265)
.....+......+++++.+.+.+++|.|+.++++.+...+...... .++.+.++....+.|++.+..++..-.++.+..
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~-~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFF-YPNSYTLYPASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC
Confidence 4445555566678888899999999999999999988886665543 455677888889999999999999999999999
Q ss_pred CCCcchhhHHHHHhhhhHHHHHHHHHHHHHH
Q 024637 191 PTPARTTGFGVASSLGKVGGMVCPLVAVGLV 221 (265)
Q Consensus 191 p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~ 221 (265)
.++.|++..++...+...+.++|.++.-.+.
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988888888777776665443
No 236
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.46 E-value=6e-05 Score=63.66 Aligned_cols=152 Identities=9% Similarity=0.031 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHH-HHHHHHHHhhhchH
Q 024637 60 LIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPG-LILSAIIVDKIGRK 138 (265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~grr 138 (265)
.++.++.+.+..|+..+.|+..-..-..+..... +.+.+...++.+...+...+. .++.+++++|++|+
T Consensus 5 E~~k~~~~~l~fF~il~~Y~iLR~lKD~lvv~~~----------~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~ 74 (472)
T TIGR00769 5 ELKKFLPLFLMFFCILFNYTILRDTKDTLVVTAK----------GSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKE 74 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhheeeccc----------CCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 3456666666666666666655433333221100 122245566666555555555 78899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhc----c---------------------------hhHHHHHHHHHHHHHHhhhhh-hhhhhc
Q 024637 139 LSMVLMFVSACIFLLPLVFH----Q---------------------------SAVVTTLLLFGVRMCVTGTIT-VATIYA 186 (265)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~----~---------------------------~~~~~~~~~~~~g~~~~~~~~-~~~~~~ 186 (265)
+++.+.........+++.+. . +.|...+..+...+......+ +.|+++
T Consensus 75 ~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fa 154 (472)
T TIGR00769 75 ALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFA 154 (472)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98877665555544443331 0 122222333344444445555 889999
Q ss_pred ccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHH
Q 024637 187 PEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLV 221 (265)
Q Consensus 187 ~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~ 221 (265)
+|.+..++-.+-+++....+++|..+++.+..++.
T Consensus 155 ndi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 155 NQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988876
No 237
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.41 E-value=4.8e-08 Score=83.86 Aligned_cols=152 Identities=16% Similarity=0.161 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHH-hhhhHHHHHHHHHHhhhc--hH
Q 024637 62 RTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIAS-LAELPGLILSAIIVDKIG--RK 138 (265)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~g--rr 138 (265)
+.++...+..........++..|.|+|.+.+. +.++..+.++..+.. .+..+|.+++|++..|+. .|
T Consensus 305 p~f~~~~la~~~~~~~~~G~~tF~pKylE~QF----------~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~ 374 (539)
T PF03137_consen 305 PVFMCLILAGVFESFIVSGFATFLPKYLESQF----------GLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSAR 374 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHH
Confidence 44555555566667777888999999998776 566666665554443 466788999999999874 44
Q ss_pred HHHHHHHHHHHHHHHH---Hhh--cc-------------------------------------------------hhHHH
Q 024637 139 LSMVLMFVSACIFLLP---LVF--HQ-------------------------------------------------SAVVT 164 (265)
Q Consensus 139 ~~~~~~~~~~~~~~~~---~~~--~~-------------------------------------------------~~~~~ 164 (265)
..+....+...++.+. ..+ .+ ....+
T Consensus 375 ~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~F 454 (539)
T PF03137_consen 375 GAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPF 454 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHH
Confidence 4444443333333322 111 00 01122
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhh-HHHHHHHHHHHHHHhh
Q 024637 165 TLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGK-VGGMVCPLVAVGLVTS 223 (265)
Q Consensus 165 ~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~-~g~~~~~~i~~~l~~~ 223 (265)
++..++..+..+....+....+-..+|+++|+.+.|+...+.+ +|.+-+|+++|.+.|.
T Consensus 455 l~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 455 LILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ------------------------------------------------------------
T ss_pred HHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 2233333334444445555666677899999999999998888 7889999999999886
No 238
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.37 E-value=5.9e-06 Score=51.40 Aligned_cols=67 Identities=12% Similarity=0.035 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHH
Q 024637 71 FFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSA 148 (265)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~ 148 (265)
++........+..|.|.+.++. +.+..+++....+..+..+++.+++|+++||+++++..+....++
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~-----------Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQL-----------GLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhc-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3344444555667788888654 488999999999999999999999999999999998877665543
No 239
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.35 E-value=4.8e-05 Score=63.45 Aligned_cols=153 Identities=15% Similarity=0.092 Sum_probs=99.3
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHH
Q 024637 49 FSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILS 128 (265)
Q Consensus 49 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (265)
...|+..++.+.+...+.+.++++. .. ++......|+... +.++..++..-.+..+.++.+.++.
T Consensus 249 ~~~w~~Y~~q~vflas~alalLY~T-VL---sf~~lmt~yl~~~-----------G~s~~~igi~R~~gav~Gl~gT~~~ 313 (432)
T PF06963_consen 249 IRGWRTYFRQPVFLASFALALLYFT-VL---SFGGLMTAYLKSQ-----------GYSPSVIGIFRGLGAVFGLLGTWVY 313 (432)
T ss_pred hccHHHHHhCHHHHHHHHHHHHHHH-Hh---cCcHHHHHHHHHC-----------CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666655444444444444443 11 2222344444333 4788888889999999999999999
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHHh---h-cc------hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhh
Q 024637 129 AIIVDKIGRKLSMVLMFVSACIFLLPLV---F-HQ------SAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTG 198 (265)
Q Consensus 129 g~l~dr~grr~~~~~~~~~~~~~~~~~~---~-~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~ 198 (265)
.++.+|+|..+.=+++......+..+.. + .. +...++....+.-+|.=+.--....++.|..|+++||+.
T Consensus 314 p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v 393 (432)
T PF06963_consen 314 PWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAV 393 (432)
T ss_pred HHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHH
Confidence 9999999988877776665444433222 2 22 122333444455555555556778899999999999999
Q ss_pred HHHHHhhhhHHHHHHHHH
Q 024637 199 FGVASSLGKVGGMVCPLV 216 (265)
Q Consensus 199 ~g~~~~~~~~g~~~~~~i 216 (265)
.|.-+...++...+.-.+
T Consensus 394 ~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 394 SGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999988766554444
No 240
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.34 E-value=8.7e-06 Score=66.27 Aligned_cols=112 Identities=13% Similarity=0.039 Sum_probs=82.6
Q ss_pred hHHHHHHHHHHhhhc-----hHHHHHH-HHHHHHHHHHHHhh-----cc-------hhH----HHHHHHHHHHHHHhhhh
Q 024637 122 LPGLILSAIIVDKIG-----RKLSMVL-MFVSACIFLLPLVF-----HQ-------SAV----VTTLLLFGVRMCVTGTI 179 (265)
Q Consensus 122 ~~~~~~~g~l~dr~g-----rr~~~~~-~~~~~~~~~~~~~~-----~~-------~~~----~~~~~~~~~g~~~~~~~ 179 (265)
.+.++.+|+.+|+.+ ||..+++ +.+....+...+.+ .. +.+ .......+.|++.+...
T Consensus 28 ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~ 107 (403)
T PF03209_consen 28 APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASG 107 (403)
T ss_pred HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhH
Confidence 356889999999988 7766554 44444443333332 22 222 23344566788888888
Q ss_pred hhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHH
Q 024637 180 TVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILF 233 (265)
Q Consensus 180 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 233 (265)
+...++++|..|++.|+.+.++.+...-+|.+++..+.+.+++.+......-+.
T Consensus 108 T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~ 161 (403)
T PF03209_consen 108 TSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVI 161 (403)
T ss_pred HHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHH
Confidence 999999999999999999999999999999999999999999887654443333
No 241
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.27 E-value=4.3e-08 Score=75.37 Aligned_cols=120 Identities=13% Similarity=0.094 Sum_probs=96.9
Q ss_pred CCCchHHHHHHHHHhhhhHHHHHHHHHHhh-hchHHHHHHHHHHHHHHHHHHhh---cchhHHHHHHHHHHHHHHhhhhh
Q 024637 105 SKDNSLYVDVFIASLAELPGLILSAIIVDK-IGRKLSMVLMFVSACIFLLPLVF---HQSAVVTTLLLFGVRMCVTGTIT 180 (265)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~ 180 (265)
.+..+..++.++++..+++-++++|++.|| +|-|....+-+....++-+.++. .+..|.+...++++|+|.-....
T Consensus 76 i~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAV 155 (459)
T KOG4686|consen 76 IEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAV 155 (459)
T ss_pred cceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhh
Confidence 445566778888999999999999999997 67776655555555555555443 67789999999999988777777
Q ss_pred hhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhc
Q 024637 181 VATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSC 224 (265)
Q Consensus 181 ~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~ 224 (265)
....+..-+|..++-+.++|+..+..++|+.+--.+.+++.+..
T Consensus 156 aQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 156 AQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred hhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 78899999999999999999999999999988777777777654
No 242
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.23 E-value=1.3e-07 Score=81.18 Aligned_cols=147 Identities=10% Similarity=0.037 Sum_probs=2.7
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcc------------------------
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ------------------------ 159 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~------------------------ 159 (265)
+.++.+++++.+.+-++..+..++..++.+|..|-+.+-++.++++++.+++...+
T Consensus 34 ~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~ 113 (539)
T PF03137_consen 34 GLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNL 113 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccccccc
Confidence 48889999999999999999999999999998777888888888888887665410
Q ss_pred --------------------------hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHH
Q 024637 160 --------------------------SAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVC 213 (265)
Q Consensus 160 --------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~ 213 (265)
....+++..++.|+|....+++..+|+-|..+++.-+...|+.+....+|-++|
T Consensus 114 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~G 193 (539)
T PF03137_consen 114 CDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALG 193 (539)
T ss_dssp --------------------------------------SSS---------------------------------------
T ss_pred ccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHH
Confidence 023455667888889899999999999999999999999999999988888888
Q ss_pred HHHHHHHHhhc----------------------chhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 214 PLVAVGLVTSC----------------------HLRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 214 ~~i~~~l~~~~----------------------~~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
-++++.++..+ .||..|++.+++.++.++..+.++++
T Consensus 194 f~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 194 FLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp -----------------------------------------------------------
T ss_pred HHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 88877665321 25666777777777777777777643
No 243
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.17 E-value=1.3e-06 Score=71.78 Aligned_cols=119 Identities=16% Similarity=0.160 Sum_probs=73.4
Q ss_pred CCchHHHHHHHHHhhhhHHHHHHHHHHhhhchH----HHHHHHHH-------HHHHHHHHHhh--cchhHHHHHHHHHHH
Q 024637 106 KDNSLYVDVFIASLAELPGLILSAIIVDKIGRK----LSMVLMFV-------SACIFLLPLVF--HQSAVVTTLLLFGVR 172 (265)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr----~~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~~~~~~g 172 (265)
+.....+...+...++.+|.+++|.++||+.|+ ....+..+ ++..+.++... ..+.+..+++.++.-
T Consensus 281 ~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~ 360 (493)
T KOG1330|consen 281 DHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGE 360 (493)
T ss_pred ccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 334445667777788899999999999995332 11112111 11122222221 222333333333222
Q ss_pred HHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhh-HHHHHHHHHHHHHHhhc
Q 024637 173 MCVTGTITVATIYAPEIYPTPARTTGFGVASSLGK-VGGMVCPLVAVGLVTSC 224 (265)
Q Consensus 173 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~-~g~~~~~~i~~~l~~~~ 224 (265)
......+++...+..|..|++.|.+++++...+.. +|.+-+|.+.|.+.++.
T Consensus 361 ~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 361 TISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKL 413 (493)
T ss_pred HHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHh
Confidence 23334456777788899999999999999998877 66777787999998764
No 244
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.16 E-value=1.9e-05 Score=69.15 Aligned_cols=148 Identities=12% Similarity=0.070 Sum_probs=116.9
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcc------------------------
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ------------------------ 159 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~------------------------ 159 (265)
..++.+.+++...+-++..+...+..+..-|.-|-+.+-++.++++++.++..+.+
T Consensus 128 ~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~ 207 (735)
T KOG3626|consen 128 KISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSL 207 (735)
T ss_pred CCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCcccc
Confidence 46667778877777888888888899999998888888889999988888766510
Q ss_pred ---------------------------hhH-HHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHH
Q 024637 160 ---------------------------SAV-VTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGM 211 (265)
Q Consensus 160 ---------------------------~~~-~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~ 211 (265)
.++ .+++..++.|+|....+++..+|+-|...++.-....|+.+++..+|-+
T Consensus 208 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPa 287 (735)
T KOG3626|consen 208 SFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPA 287 (735)
T ss_pred chhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhH
Confidence 022 3455677888888889999999999999999999999999998888888
Q ss_pred HHHHHHHHHHhhc-------------------chhHHHHHHHHHHHHHHHHHhcCCccc
Q 024637 212 VCPLVAVGLVTSC-------------------HLRLAVILFEVVFVLAIASSLLFPFET 251 (265)
Q Consensus 212 ~~~~i~~~l~~~~-------------------~~~~~~~~~~~~~~i~~~~~~~~~~~~ 251 (265)
+|=++++++...+ .||..|++.+.+.++.++..++++++.
T Consensus 288 iGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~l 346 (735)
T KOG3626|consen 288 IGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKEL 346 (735)
T ss_pred HHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccC
Confidence 8888888776421 266677888888888888888887543
No 245
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.06 E-value=3.2e-05 Score=62.25 Aligned_cols=86 Identities=17% Similarity=0.216 Sum_probs=71.8
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhh--------------
Q 024637 158 HQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTS-------------- 223 (265)
Q Consensus 158 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~-------------- 223 (265)
..+++.+++..++.+.|.+...+...++++++.|++.+++.+++.+.+..+|..++|++.+.+...
T Consensus 7 ~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~ 86 (310)
T TIGR01272 7 QRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANA 86 (310)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhH
Confidence 457788899999999999999999999999999999999999999999999999999999988732
Q ss_pred --cchhHHHHHHHHHHHHHHHH
Q 024637 224 --CHLRLAVILFEVVFVLAIAS 243 (265)
Q Consensus 224 --~~~~~~~~~~~~~~~i~~~~ 243 (265)
..|+.+++..+.+..+..++
T Consensus 87 ~~~~~~~~yl~ia~~~~~~~i~ 108 (310)
T TIGR01272 87 EAAKVHTPYLLLAGALAVLAII 108 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 24667777666555444443
No 246
>PRK03612 spermidine synthase; Provisional
Probab=98.02 E-value=0.0017 Score=56.01 Aligned_cols=138 Identities=14% Similarity=0.042 Sum_probs=75.3
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHH-H-HHHHHHHHHHHhhcc-----hhHHHHHHHHHHHHHHh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVL-M-FVSACIFLLPLVFHQ-----SAVVTTLLLFGVRMCVT 176 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~-~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~ 176 (265)
+.+....+.+.+++.++..+|+.+++++.++.-++....- . .++.+++..++.... .....+...++.++..|
T Consensus 46 G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G 125 (521)
T PRK03612 46 GDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIG 125 (521)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566666777777778888888777643322222111 1 111111111111111 11122333444556666
Q ss_pred hhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHHHH
Q 024637 177 GTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVT-SCHLRLAVILFEVVFVLAIA 242 (265)
Q Consensus 177 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~-~~~~~~~~~~~~~~~~i~~~ 242 (265)
+..|....+..+... +.-+...|-.+....+|+++|+++.++++- ..|.....++.+.+.++.++
T Consensus 126 ~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 126 MEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 666666555544322 123567788888889999999999887764 66766666565555544443
No 247
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.99 E-value=0.0001 Score=62.21 Aligned_cols=145 Identities=13% Similarity=0.118 Sum_probs=99.2
Q ss_pred CCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh----------cchhHHHHHHHHHHHHH
Q 024637 105 SKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF----------HQSAVVTTLLLFGVRMC 174 (265)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~g~~ 174 (265)
.++...+....+..++.++|..+......+..-|+++.++.++..+..+.-.. .++.+..+.-.++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 55666666667777777888888877777778888888887777665543221 12223333344555555
Q ss_pred HhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcch--------hHHHHHHHHHHHHHHHHHhc
Q 024637 175 VTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHL--------RLAVILFEVVFVLAIASSLL 246 (265)
Q Consensus 175 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~--------~~~~~~~~~~~~i~~~~~~~ 246 (265)
....+-+...+++|+.|+..-|+.+++..++.|+|..++..++..+.+..+. +...++..++.++...+..+
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 5566677788899999999999999999999999999999999988876652 22233334444444444545
Q ss_pred CCc
Q 024637 247 FPF 249 (265)
Q Consensus 247 ~~~ 249 (265)
++|
T Consensus 412 Lp~ 414 (433)
T PF03092_consen 412 LPP 414 (433)
T ss_pred cCC
Confidence 554
No 248
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.98 E-value=5.9e-05 Score=63.65 Aligned_cols=119 Identities=14% Similarity=0.158 Sum_probs=99.3
Q ss_pred CCCCchHHHHHHHHHhhhhHHHHHHH-HHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhh
Q 024637 104 KSKDNSLYVDVFIASLAELPGLILSA-IIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVA 182 (265)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 182 (265)
+.+..+.+...+..+....++.++.. .+...+|-|++...|.+...+..+...+.+..|..+....+.. ......+..
T Consensus 273 ~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~-~~~~~~pa~ 351 (463)
T KOG2816|consen 273 GWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVA-LAGIVFPAI 351 (463)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHH-hhcchhHHH
Confidence 46667777777777777788877665 7788899999999999999999999999998888777766554 445667889
Q ss_pred hhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhh
Q 024637 183 TIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTS 223 (265)
Q Consensus 183 ~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~ 223 (265)
.+.++-..+++.+|.++++...+..+.++++|.+.+.+...
T Consensus 352 ~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 352 RAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred HhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999887643
No 249
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.94 E-value=7.1e-05 Score=61.91 Aligned_cols=110 Identities=13% Similarity=0.029 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHHHhh---cch------hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC---cchhhHHHHHhhh
Q 024637 139 LSMVLMFVSACIFLLPLVF---HQS------AVVTTLLLFGVRMCVTGTITVATIYAPEIYPTP---ARTTGFGVASSLG 206 (265)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~---~r~~~~g~~~~~~ 206 (265)
++++++.++..++.+++.. ... .+.+++...+.++|.|+.-+...++..|.++++ .|...+.+.+...
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 4667777888887777443 111 245777777889999999999999999999875 4677888889999
Q ss_pred hHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhcCC
Q 024637 207 KVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 207 ~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
++|+.+++.+.+++.+..+|...|.+.++..+++.+..+.-.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~ 123 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999888888887777666554
No 250
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.91 E-value=0.0019 Score=53.40 Aligned_cols=128 Identities=18% Similarity=0.148 Sum_probs=92.4
Q ss_pred hhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHH
Q 024637 121 ELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFG 200 (265)
Q Consensus 121 ~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g 200 (265)
.++.-++...+.|.++.|++++++.+...+...++.+.++...+-+.-+..|++.+. -.+.++++=...|+++-.++.+
T Consensus 54 yl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts 132 (412)
T PF01770_consen 54 YLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTS 132 (412)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHH
Confidence 344566778899999999999999999999999988999998888888888877655 4667778877888887777787
Q ss_pred HHHhhhhHHHHHHHHHHHHHHhh--cchhHHHHHHHHHHHHHHHHHhcCCc
Q 024637 201 VASSLGKVGGMVCPLVAVGLVTS--CHLRLAVILFEVVFVLAIASSLLFPF 249 (265)
Q Consensus 201 ~~~~~~~~g~~~~~~i~~~l~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~ 249 (265)
......-+|..++..++-.+... ..+.....+......++.++.+++++
T Consensus 133 ~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 133 YTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPM 183 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77777777777777666655543 23333333333444455555566653
No 251
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.91 E-value=0.0017 Score=55.54 Aligned_cols=111 Identities=14% Similarity=-0.031 Sum_probs=77.1
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhch--H----H-HHHHHHHHHHHHHHHHhh----c-----chhHHHHHHHHHHHH
Q 024637 110 LYVDVFIASLAELPGLILSAIIVDKIGR--K----L-SMVLMFVSACIFLLPLVF----H-----QSAVVTTLLLFGVRM 173 (265)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~g~l~dr~gr--r----~-~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~g~ 173 (265)
..+..++..+.-++.+++.+++-.|.+| | + =+.++.++.+++.+.+.. . .+.++++...++..+
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 4556666666666777777777666532 2 1 156777777777766543 1 245667777777888
Q ss_pred HHhhhhhhhhhhcccccCCCcchhhHHHHHhhh-hHHHHHHHHHHHHH
Q 024637 174 CVTGTITVATIYAPEIYPTPARTTGFGVASSLG-KVGGMVCPLVAVGL 220 (265)
Q Consensus 174 ~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~-~~g~~~~~~i~~~l 220 (265)
+--...|+..++++++.|++.||..+|...... .+|..++..+.+..
T Consensus 390 gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 877788999999999999999999999986543 46666655555543
No 252
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.91 E-value=0.00011 Score=60.41 Aligned_cols=110 Identities=18% Similarity=0.170 Sum_probs=71.8
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHh---hcchhHHHHHHHHHHHHHHhhhhhhhhhh
Q 024637 109 SLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV---FHQSAVVTTLLLFGVRMCVTGTITVATIY 185 (265)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 185 (265)
.-.+....+.+|.++++--..++ |+.+-+++.+..++..+.++.-. +.++.|..++..+..|+..|..+...+..
T Consensus 282 ~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~ 359 (402)
T PF02487_consen 282 QYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYR 359 (402)
T ss_pred HHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 34455666666655553322111 33232332222222222222222 25677888888888999999999999999
Q ss_pred cccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHH
Q 024637 186 APEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGL 220 (265)
Q Consensus 186 ~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l 220 (265)
+.|-.|+++|-.++|.....-.+|..++.+++-++
T Consensus 360 I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 360 ISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999988888888887776544
No 253
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.85 E-value=0.00024 Score=44.74 Aligned_cols=78 Identities=8% Similarity=-0.030 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 024637 75 VFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLP 154 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 154 (265)
....+.+...+|...++. +.+..+.+++.+...++.++|.+...++.++..+++.+..+.+...+..+.
T Consensus 5 GigRFayTplLP~M~~~~-----------~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADG-----------GLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAA 73 (85)
T ss_pred hhHHHHHHhHhHHHHHhc-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 455677777889887655 488899999999999999999999999999988899999999999999998
Q ss_pred HhhcchhHH
Q 024637 155 LVFHQSAVV 163 (265)
Q Consensus 155 ~~~~~~~~~ 163 (265)
+.+..+.+.
T Consensus 74 ma~~~~~~~ 82 (85)
T PF06779_consen 74 MALTHSFWL 82 (85)
T ss_pred HHHHhchHH
Confidence 888776554
No 254
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.84 E-value=0.0011 Score=55.67 Aligned_cols=109 Identities=16% Similarity=0.141 Sum_probs=81.9
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhh---hchHHHHHHHHHHHHHHHHHHhh-----c-------------chhHHHHHHH
Q 024637 110 LYVDVFIASLAELPGLILSAIIVDK---IGRKLSMVLMFVSACIFLLPLVF-----H-------------QSAVVTTLLL 168 (265)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~g~l~dr---~grr~~~~~~~~~~~~~~~~~~~-----~-------------~~~~~~~~~~ 168 (265)
..+.....+++..+++...+.+.+| +||++.+.++..+..+..++... + ++.....+..
T Consensus 281 ~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~ 360 (461)
T KOG3098|consen 281 IAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIG 360 (461)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHH
Confidence 4445556667788888888888765 68999998888888887776654 1 1244667777
Q ss_pred HHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHH
Q 024637 169 FGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 169 ~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
++.|++-.......+.++...+ ++.|..+.++.-.-..++..++-+..+.
T Consensus 361 ~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 361 FLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 8889998888899999999999 4568888888887777777666666553
No 255
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.62 E-value=0.007 Score=50.10 Aligned_cols=132 Identities=14% Similarity=0.124 Sum_probs=88.1
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 024637 111 YVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIY 190 (265)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~ 190 (265)
+.......+..++..++..+..+|+.-+.-..+..+++.+++++.+++++.+.-++..++.+++.|..-.....+.. .+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hc
Confidence 33444455667777888999999987555566677788888888888888888888888888888877666666544 56
Q ss_pred CCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHHHHHHHHhcCC
Q 024637 191 PTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH--LRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 191 p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~--~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
|+. ..+-..+....++.+|+...-.+.+ .+ .+..++....+.++..+..++..
T Consensus 141 ~~~----~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L 195 (402)
T PF02487_consen 141 GKS----SLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLL 195 (402)
T ss_pred Ccc----ccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 542 2333444445677777777766655 44 35566666666655554444444
No 256
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.60 E-value=0.0013 Score=53.95 Aligned_cols=143 Identities=15% Similarity=0.077 Sum_probs=95.7
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHH-HHHHHHHHHHHHHhhcc---hhHHHHHHHHHHHHHHhhhhhhhhh
Q 024637 109 SLYVDVFIASLAELPGLILSAIIVDKIGRKLSMV-LMFVSACIFLLPLVFHQ---SAVVTTLLLFGVRMCVTGTITVATI 184 (265)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~ 184 (265)
..+...++..+...+-+++.|.++|+.|+||..+ ....+..++.+.+.+.+ ..+..+++..+..++.........+
T Consensus 59 ~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds 138 (438)
T COG2270 59 YWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDS 138 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhh
Confidence 3455566666777788899999999999666555 44444555555555533 3444555566777777788888899
Q ss_pred hcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHH------------------hhcchhHHHHHHHHHHHHHHHHHhc
Q 024637 185 YAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLV------------------TSCHLRLAVILFEVVFVLAIASSLL 246 (265)
Q Consensus 185 ~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~------------------~~~~~~~~~~~~~~~~~i~~~~~~~ 246 (265)
+..++.+++.-+...++....+.+|+.+.-++.-... +....+..+.+.++..++..+-.++
T Consensus 139 ~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~ 218 (438)
T COG2270 139 MLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMIL 218 (438)
T ss_pred HhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHh
Confidence 9999999988888888888888888866544431111 1123456666777776666666655
Q ss_pred CCccc
Q 024637 247 FPFET 251 (265)
Q Consensus 247 ~~~~~ 251 (265)
..++.
T Consensus 219 ~v~~~ 223 (438)
T COG2270 219 NVHDA 223 (438)
T ss_pred ccccc
Confidence 55443
No 257
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.58 E-value=0.00074 Score=56.91 Aligned_cols=108 Identities=10% Similarity=0.065 Sum_probs=70.2
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhchH-HHHHHHHHHHHHH---HHHHhh---------cchhHHHHHHHHHHHHHHh
Q 024637 110 LYVDVFIASLAELPGLILSAIIVDKIGRK-LSMVLMFVSACIF---LLPLVF---------HQSAVVTTLLLFGVRMCVT 176 (265)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr-~~~~~~~~~~~~~---~~~~~~---------~~~~~~~~~~~~~~g~~~~ 176 (265)
......+++++..+|+.+..+.. .-++| +.+.+..+.=.+. .+++.. -++.+..++..++.|+..|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 34566677788888887554321 11222 1222222222222 122211 1356677778889999999
Q ss_pred hhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHH
Q 024637 177 GTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAV 218 (265)
Q Consensus 177 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~ 218 (265)
-..+....+.++..++++|-.+..+...+..+|-.+|..+.-
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998999999999999999988888888888888888877643
No 258
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.55 E-value=0.00013 Score=60.24 Aligned_cols=146 Identities=12% Similarity=0.061 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhh----hch
Q 024637 62 RTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDK----IGR 137 (265)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~gr 137 (265)
+.++......++..+.+..-..|++.|....+ .+....+....+.-+.+++..++.|..+|| +||
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lG-----------vphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GR 100 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLG-----------VPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGR 100 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHcC-----------CCcccccccccccccccceeccccccccccccccccc
Confidence 44444555555555555555556666665554 444455555555567778888999999995 788
Q ss_pred HHHHHHH-HHHHHHHHHHHhhcch-----------------hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchh-h
Q 024637 138 KLSMVLM-FVSACIFLLPLVFHQS-----------------AVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTT-G 198 (265)
Q Consensus 138 r~~~~~~-~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~-~ 198 (265)
||.++.. .+...++.+++.+..+ ....++...+.-+.....+++.-++..|+.....+.+ +
T Consensus 101 RRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~A 180 (498)
T KOG0637|consen 101 RRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRA 180 (498)
T ss_pred ccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhcc
Confidence 8876654 4445555555554211 1223333445556667788899999999998777777 8
Q ss_pred HHHHHhhhhHHHHHHHHHHH
Q 024637 199 FGVASSLGKVGGMVCPLVAV 218 (265)
Q Consensus 199 ~g~~~~~~~~g~~~~~~i~~ 218 (265)
.+....+..+|+.+|-.+++
T Consensus 181 ns~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 181 NSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred chhHHHHHHhcceeeeeccc
Confidence 88888888888877766665
No 259
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.52 E-value=0.0053 Score=53.49 Aligned_cols=180 Identities=13% Similarity=0.076 Sum_probs=113.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhh-
Q 024637 57 SRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKI- 135 (265)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~- 135 (265)
+...|+.....+........+++++..-+-.|+.... +.+...+.-......-......+++++++|.+
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~----------~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~ 101 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLEL----------HASGGGAANNVNAFGGTQFLLPLLGAFLADSFL 101 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHh----------ccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 3444555544544455566666655433333332221 23334444445555555567778999999975
Q ss_pred chHHHHHHHHHHHHHHHHHHhhc-------c---------------hh---HHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 024637 136 GRKLSMVLMFVSACIFLLPLVFH-------Q---------------SA---VVTTLLLFGVRMCVTGTITVATIYAPEIY 190 (265)
Q Consensus 136 grr~~~~~~~~~~~~~~~~~~~~-------~---------------~~---~~~~~~~~~~g~~~~~~~~~~~~~~~e~~ 190 (265)
||-+++.++.++..++++++... + +. ..++....+..+|.|+.-+...++-+|-+
T Consensus 102 gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQf 181 (571)
T KOG1237|consen 102 GRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQF 181 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhccccc
Confidence 89999998888887776544430 0 11 12333344455577777888899999888
Q ss_pred CC----C--cchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhc
Q 024637 191 PT----P--ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLL 246 (265)
Q Consensus 191 p~----~--~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 246 (265)
+. + .+..-+.+.+...++|..++..+..++-+..+|...+-+..+...++.++.+.
T Consensus 182 d~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 182 DELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred CccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHc
Confidence 82 2 23366677777778898888888888878888888777777766666555443
No 260
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.40 E-value=0.0051 Score=50.96 Aligned_cols=97 Identities=12% Similarity=0.009 Sum_probs=68.4
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHHHH--HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhccc
Q 024637 111 YVDVFIASLAELPGLILSAIIVDKIGRKLSM--VLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPE 188 (265)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e 188 (265)
+..-.+..+.+.++++..|++..++.+..-+ .+..++.+.+.+++.+.++.|..++..++++.......++...-++.
T Consensus 288 G~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~ 367 (412)
T PF01770_consen 288 GAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAK 367 (412)
T ss_pred hHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455566677888899987777664433 34455556667777778899988888888877777777777777777
Q ss_pred ccCCCcchhhHHHHHhhhh
Q 024637 189 IYPTPARTTGFGVASSLGK 207 (265)
Q Consensus 189 ~~p~~~r~~~~g~~~~~~~ 207 (265)
....+.-|..+|+.+++.-
T Consensus 368 ~l~~e~yaLVFGiNtf~Al 386 (412)
T PF01770_consen 368 NLSEERYALVFGINTFVAL 386 (412)
T ss_pred hccccceeeeeeeHHHHHH
Confidence 7777777777777766544
No 261
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.38 E-value=0.021 Score=48.91 Aligned_cols=153 Identities=14% Similarity=0.130 Sum_probs=89.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHh-hhhHHHHHHHHHHhhhc
Q 024637 58 RKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASL-AELPGLILSAIIVDKIG 136 (265)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g 136 (265)
+..++.++.+.++.|+..+.|...-..-..+... ...++.+..+=....+ +.++..++..+++++++
T Consensus 20 ~~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt------------~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s 87 (491)
T PF03219_consen 20 RSELKKFLPLALMFFFILFNYTILRDLKDTLVVT------------AQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLS 87 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEe------------cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3455666666666665555444432222211110 1122333333332222 34555677889999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhh---------cc----------------------hhHHHHHHHHHHHHHHhhhhh-hhhh
Q 024637 137 RKLSMVLMFVSACIFLLPLVF---------HQ----------------------SAVVTTLLLFGVRMCVTGTIT-VATI 184 (265)
Q Consensus 137 rr~~~~~~~~~~~~~~~~~~~---------~~----------------------~~~~~~~~~~~~g~~~~~~~~-~~~~ 184 (265)
|.+++-+..........+.++ .+ +.|...+..+..-+......+ ..|.
T Consensus 88 ~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~ 167 (491)
T PF03219_consen 88 REKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWG 167 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999877655544444333332 11 112222222222232233334 5799
Q ss_pred hcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHh
Q 024637 185 YAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVT 222 (265)
Q Consensus 185 ~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~ 222 (265)
+++|.++.++-.+-+++....+++|.+++..+..++.+
T Consensus 168 fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 168 FANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988888877
No 262
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.23 E-value=0.086 Score=44.56 Aligned_cols=154 Identities=15% Similarity=0.117 Sum_probs=96.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHh-hhhHHHHHHHHHHhhhc
Q 024637 58 RKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASL-AELPGLILSAIIVDKIG 136 (265)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g 136 (265)
+..++.++.+.++.++..+.++.+-..-..+... ...+..+..+-+..-+ +.++..++.+++.++..
T Consensus 23 r~E~~kflpl~Ll~f~I~~ny~~lR~lKDslvv~------------~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt 90 (509)
T COG3202 23 RYELKKFLPLALLFFCILFNYNLLRSLKDSLVVT------------RQGAESISFLKTWGVLPSAVIFTIIYQKLLNILT 90 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhheEee------------cCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcC
Confidence 4456666666666666666555543332222211 1233444444444444 55667788899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhh---------cc-----------------------hhHHHHHHHHHHHHHHhhhhh-hhh
Q 024637 137 RKLSMVLMFVSACIFLLPLVF---------HQ-----------------------SAVVTTLLLFGVRMCVTGTIT-VAT 183 (265)
Q Consensus 137 rr~~~~~~~~~~~~~~~~~~~---------~~-----------------------~~~~~~~~~~~~g~~~~~~~~-~~~ 183 (265)
|.+++-+.+.....+.+++++ .+ +.|...+...+.-+-.....+ ..+
T Consensus 91 ~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw 170 (509)
T COG3202 91 REKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFW 170 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999887665555544444333 01 113333333333333333334 678
Q ss_pred hhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhh
Q 024637 184 IYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTS 223 (265)
Q Consensus 184 ~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~ 223 (265)
....|.+..++-.+-+++.+..++++..++..+..++..+
T Consensus 171 ~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 171 QFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 8999999999999999999999999999999888888763
No 263
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.14 E-value=0.001 Score=51.43 Aligned_cols=150 Identities=12% Similarity=-0.005 Sum_probs=85.2
Q ss_pred CCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhh
Q 024637 105 SKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATI 184 (265)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 184 (265)
+...+++.+........++...+.|-++||.|||+.-+.-++...++++- -.++.+-++++.+.+.|+..+..++..-+
T Consensus 69 FgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT-KhSpqYkVLmVGR~LGGiaTsLLFSaFEs 147 (454)
T KOG4332|consen 69 FGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT-KHSPQYKVLMVGRVLGGIATSLLFSAFES 147 (454)
T ss_pred ccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh-hcCCceEEEeehhhhhhHHHHHHHHHHHH
Confidence 44566666666555566677788889999999998755444444444432 12566667888899988888877766655
Q ss_pred h-ccccc-----CCCcchhhHHHHHhhhh-HHHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHHHHHHhcCCccccccc
Q 024637 185 Y-APEIY-----PTPARTTGFGVASSLGK-VGGMVCPLVAVGLVTSC--HLRLAVILFEVVFVLAIASSLLFPFETMGRE 255 (265)
Q Consensus 185 ~-~~e~~-----p~~~r~~~~g~~~~~~~-~g~~~~~~i~~~l~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 255 (265)
+ +.|.- |.+--...++=...+++ +-++++.+.+-.+.+.+ |...+|-..+++..++..+.+--..|..+++
T Consensus 148 WliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENygdp 227 (454)
T KOG4332|consen 148 WLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGDP 227 (454)
T ss_pred HHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCCh
Confidence 3 44543 22222222222222333 33344444444445543 5556666555555555555554444555443
No 264
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.02 E-value=0.01 Score=49.99 Aligned_cols=113 Identities=12% Similarity=0.034 Sum_probs=92.1
Q ss_pred CCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhh
Q 024637 106 KDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIY 185 (265)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 185 (265)
++..-.....+......+.+++.+.+.|++|.|..+.++........+...+.+ .+..++...+.|+|.+..+.-.-.+
T Consensus 48 ~~~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N-~y~~yfssallG~Gaallw~GqG~y 126 (461)
T KOG3098|consen 48 SAYAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPN-SYYLYFSSALLGFGAALLWTGQGGY 126 (461)
T ss_pred CCCccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcc-hHHHHHHHHHhhhhHHheeccccee
Confidence 333434446666677788999999999999999999999988888877766555 5667888899999999989999999
Q ss_pred cccccCCCcchhhHHHHHhhhhHHHHHHHHHHHH
Q 024637 186 APEIYPTPARTTGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 186 ~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
.+|...++.+.+..++...+...+.++|..+...
T Consensus 127 lt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 127 LTSNSTRETIERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred hhhcCChhhHHHHHHHHHHHHHHHHHhhhHhhee
Confidence 9999999999999999998888777777655443
No 265
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.01 E-value=0.043 Score=46.36 Aligned_cols=142 Identities=14% Similarity=-0.046 Sum_probs=92.3
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHHhhhchH-------HHHHHHHHHHHHHHHHHhh-----c-----chhHHHHHHHHHH
Q 024637 109 SLYVDVFIASLAELPGLILSAIIVDKIGRK-------LSMVLMFVSACIFLLPLVF-----H-----QSAVVTTLLLFGV 171 (265)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr-------~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~ 171 (265)
...+..++..+.-++.+++..++..|.+++ .=+-++..+++.+.+++.. . .+.++.+...++.
T Consensus 325 p~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~ 404 (498)
T COG3104 325 PPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQ 404 (498)
T ss_pred CHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHH
Confidence 335666666677777777777777775443 1233455555555444433 1 3467777778888
Q ss_pred HHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHH------HHhhcchhHHHHHHHHHHHHHHHHHh
Q 024637 172 RMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVG------LVTSCHLRLAVILFEVVFVLAIASSL 245 (265)
Q Consensus 172 g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~------l~~~~~~~~~~~~~~~~~~i~~~~~~ 245 (265)
.++--...|+..+++..+.|+...+..+++.......|+.++..+.+. ..+.......|...+....+..+...
T Consensus 405 s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~ 484 (498)
T COG3104 405 SFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLL 484 (498)
T ss_pred HHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 888777789999999999999988888888777777777776666552 22333344566666666665555555
Q ss_pred cCCcc
Q 024637 246 LFPFE 250 (265)
Q Consensus 246 ~~~~~ 250 (265)
...|+
T Consensus 485 ~~~~~ 489 (498)
T COG3104 485 LLSPK 489 (498)
T ss_pred HhhHH
Confidence 44443
No 266
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.90 E-value=0.00027 Score=56.92 Aligned_cols=104 Identities=15% Similarity=0.138 Sum_probs=3.7
Q ss_pred HHHHHHhhhhHHHHHHHHHHhh-hchHHHHHHHHHHHHHH---HHHHh----------hcchhHHHHHHHHHHHHHHhhh
Q 024637 113 DVFIASLAELPGLILSAIIVDK-IGRKLSMVLMFVSACIF---LLPLV----------FHQSAVVTTLLLFGVRMCVTGT 178 (265)
Q Consensus 113 ~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~---~~~~~----------~~~~~~~~~~~~~~~g~~~~~~ 178 (265)
.+.+++++..+|+.+.++..=+ ..+|.+.. ..+.-.+. .+++. ..++.++.++..++.++..|-.
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~-~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWI-LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHH-HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 4557788999999988764311 13443333 22222211 11110 1234456677788889999988
Q ss_pred hhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHH
Q 024637 179 ITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVA 217 (265)
Q Consensus 179 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~ 217 (265)
.+....+.++..++++|..+..+...+-.+|-.+|..+.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp -HHHH----------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999988888888777777777777776664
No 267
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.80 E-value=0.0014 Score=55.25 Aligned_cols=73 Identities=18% Similarity=0.166 Sum_probs=55.2
Q ss_pred HHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 024637 171 VRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIAS 243 (265)
Q Consensus 171 ~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~ 243 (265)
.|.+.-.......+.-+|...++.+++..|+......++..++|++...+....|.+....+.++..++...+
T Consensus 398 ~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l 470 (488)
T KOG2325|consen 398 FGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAAL 470 (488)
T ss_pred eccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHH
Confidence 3333333345677888899999999999999999999999999999998888888876666655555444333
No 268
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.76 E-value=0.28 Score=41.45 Aligned_cols=136 Identities=12% Similarity=0.004 Sum_probs=71.1
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHH----H---HHHhh-cc----hhHHHHHHHH---HHH-H
Q 024637 110 LYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIF----L---LPLVF-HQ----SAVVTTLLLF---GVR-M 173 (265)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~----~---~~~~~-~~----~~~~~~~~~~---~~g-~ 173 (265)
.........+..++.++..|...||..|.++...+.+..-++ + +.+.. .. +.+....+.. +.+ +
T Consensus 40 ~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i 119 (432)
T PF06963_consen 40 VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAI 119 (432)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHH
Confidence 444555556777788888999999999988766554432221 1 11111 11 1122211111 111 1
Q ss_pred HHhhhhhhhhhhcccccCC--CcchhhHHHHHhhh----hHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHh
Q 024637 174 CVTGTITVATIYAPEIYPT--PARTTGFGVASSLG----KVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSL 245 (265)
Q Consensus 174 ~~~~~~~~~~~~~~e~~p~--~~r~~~~g~~~~~~----~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 245 (265)
..-.......+.--|+.+. +.+.....-.|... -+..+++|++.|.+.+..+......+.++..++...+=+
T Consensus 120 ~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy 197 (432)
T PF06963_consen 120 ERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEY 197 (432)
T ss_pred HHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHH
Confidence 1111112222222233221 11222223333333 368999999999999988887777777777766665533
No 269
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=96.75 E-value=0.013 Score=49.53 Aligned_cols=96 Identities=9% Similarity=0.003 Sum_probs=70.8
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchH--HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 024637 115 FIASLAELPGLILSAIIVDKIGRK--LSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPT 192 (265)
Q Consensus 115 ~~~~~~~~~~~~~~g~l~dr~grr--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~ 192 (265)
.+..+.+.+.++..|++-.++.+- ..+.+..++.+...+++.+.++.|..++..++++.......++...-++.....
T Consensus 305 A~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~ 384 (511)
T TIGR00806 305 AASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSK 384 (511)
T ss_pred HHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 333455667788889887766543 334444555566667777789999999999998888888888888888888888
Q ss_pred CcchhhHHHHHhhhhHHH
Q 024637 193 PARTTGFGVASSLGKVGG 210 (265)
Q Consensus 193 ~~r~~~~g~~~~~~~~g~ 210 (265)
+.-|..+|+.+++.-+-.
T Consensus 385 ~~~aLvFGiNtfvAl~LQ 402 (511)
T TIGR00806 385 ELCALVFGINTFVATALK 402 (511)
T ss_pred cceEEEEecHHHHHHHHH
Confidence 877888888877765433
No 270
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.74 E-value=0.021 Score=46.63 Aligned_cols=143 Identities=20% Similarity=0.146 Sum_probs=70.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHh-----h
Q 024637 60 LIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVD-----K 134 (265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r 134 (265)
.++.++.+.+.+..+..- ++....+|.+++.. +.+-++.+.....+. -..--+++.++.| |
T Consensus 29 d~~~illLl~LYllQGiP-~GL~~~iP~lL~ak-----------~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~ 94 (510)
T KOG3574|consen 29 DRSSILLLLFLYLLQGIP-LGLIGAIPLLLQAK-----------GVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKR 94 (510)
T ss_pred hhhhHHHHHHHHHHcCCc-hhHhhhhHHHhcCC-----------Ccchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHh
Confidence 344555555555554443 34444778887533 244344333322211 1223467888888 9
Q ss_pred hchHHHHHH-HHHHHHHHHHHHhhc-----------chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHH
Q 024637 135 IGRKLSMVL-MFVSACIFLLPLVFH-----------QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVA 202 (265)
Q Consensus 135 ~grr~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~ 202 (265)
+||||..++ +..+.+..+..+... ++........++.-+....--...-.+.-.+..++.-|-+....
T Consensus 95 ~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q 174 (510)
T KOG3574|consen 95 FGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQ 174 (510)
T ss_pred hccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHH
Confidence 999986554 334444444444431 11111111223333333322345556666667776666655444
Q ss_pred HhhhhHHHHHHHHH
Q 024637 203 SSLGKVGGMVCPLV 216 (265)
Q Consensus 203 ~~~~~~g~~~~~~i 216 (265)
....++|.+++-.+
T Consensus 175 ~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 175 SVGQTAGYFLGNVV 188 (510)
T ss_pred HHHHhhhHHhhcce
Confidence 44444555555443
No 271
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.50 E-value=0.13 Score=43.76 Aligned_cols=56 Identities=13% Similarity=0.054 Sum_probs=45.5
Q ss_pred HHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhh
Q 024637 168 LFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTS 223 (265)
Q Consensus 168 ~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~ 223 (265)
..+..+.....+....++-+.+.+|..-|+.+.+.+++.|+|+---..+.-++.|.
T Consensus 412 ~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 412 HVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 44555555666677888888999999999999999999999998877777777764
No 272
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.49 E-value=0.029 Score=43.29 Aligned_cols=102 Identities=14% Similarity=0.066 Sum_probs=52.4
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhh-hchHHHHH----HHHHHHHHHHHHHhh-c-c---hhHHHHHHHHHHHHHHhhhhhh
Q 024637 112 VDVFIASLAELPGLILSAIIVDK-IGRKLSMV----LMFVSACIFLLPLVF-H-Q---SAVVTTLLLFGVRMCVTGTITV 181 (265)
Q Consensus 112 ~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~----~~~~~~~~~~~~~~~-~-~---~~~~~~~~~~~~g~~~~~~~~~ 181 (265)
....+...+..+|.+..|..... +.||+.+. .+.+...++.+..+. . . +...++++.++.|++.=+.+++
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~V 224 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGV 224 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 33444445555666777777654 34554333 222333333333212 1 1 2445667777777776666666
Q ss_pred hhhhcccc--cCCCcchhhHHHHHhhhhHHHHHH
Q 024637 182 ATIYAPEI--YPTPARTTGFGVASSLGKVGGMVC 213 (265)
Q Consensus 182 ~~~~~~e~--~p~~~r~~~~g~~~~~~~~g~~~~ 213 (265)
.....-|. ..++.-|.-.|+...++.+.-.+.
T Consensus 225 iL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~ 258 (267)
T PF07672_consen 225 ILNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIY 258 (267)
T ss_pred HhcChhhhcCCCcceehhHHHHHHHHHHHHHHHH
Confidence 66655554 334455666666655555444333
No 273
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=96.09 E-value=0.068 Score=43.21 Aligned_cols=130 Identities=14% Similarity=0.096 Sum_probs=83.0
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHH--HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 024637 116 IASLAELPGLILSAIIVDKIGRKL--SMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTP 193 (265)
Q Consensus 116 ~~~~~~~~~~~~~g~l~dr~grr~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~ 193 (265)
+..+.++++.+..|++--++.|.. ++.++.+..+.+.+.+..+.+.|+.++...++........++...-+++....+
T Consensus 279 v~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e 358 (433)
T KOG3810|consen 279 VSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSE 358 (433)
T ss_pred HHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhh
Confidence 334566778888999887776653 344455555556666666888888888888877777777777777777777777
Q ss_pred cchhhHHHHHhhhhHHHHHHHHHHHHHHhhcc-----------hhHHHHHHHHHHHHHHHHHhcCC
Q 024637 194 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-----------LRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 194 ~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~-----------~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
.-|..+|+.+++.-+ +-+++.-...|..| +...|.+.+++.++...+.+...
T Consensus 359 ~~gLvFGiNTFvAl~---lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~ 421 (433)
T KOG3810|consen 359 LFGLVFGINTFVALI---LQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMC 421 (433)
T ss_pred hheeeeehHHHHHHH---HHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHh
Confidence 788888877766443 33333333344322 12345666666666655544443
No 274
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.84 E-value=0.004 Score=52.81 Aligned_cols=69 Identities=13% Similarity=0.068 Sum_probs=50.5
Q ss_pred HHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHH-HHHHHHHHHHHHh
Q 024637 78 YYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVL-MFVSACIFLLPLV 156 (265)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~-~~~~~~~~~~~~~ 156 (265)
.-.+...++.|.++. +.++.+.+.+....-+..+++.+++|+++||+.+|+.+++ +.+....+.+++.
T Consensus 27 ~g~l~pll~vy~kQL-----------Gl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~ 95 (618)
T KOG3762|consen 27 FGSLFPLLAVYFKQL-----------GLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLV 95 (618)
T ss_pred ccccchHHHHHHHHc-----------CCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhee
Confidence 334556677777555 4888898998888889999999999999999976655554 4555555555555
Q ss_pred h
Q 024637 157 F 157 (265)
Q Consensus 157 ~ 157 (265)
+
T Consensus 96 f 96 (618)
T KOG3762|consen 96 F 96 (618)
T ss_pred e
Confidence 4
No 275
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.31 E-value=0.025 Score=46.64 Aligned_cols=104 Identities=17% Similarity=0.140 Sum_probs=63.3
Q ss_pred HHHHH-HHhhhhHHHHHHHHHHhhhchHHHHHHHHH-HHHHHHHHH-------hhcchhHHHHHHHHHHHHHHhhhhhhh
Q 024637 112 VDVFI-ASLAELPGLILSAIIVDKIGRKLSMVLMFV-SACIFLLPL-------VFHQSAVVTTLLLFGVRMCVTGTITVA 182 (265)
Q Consensus 112 ~~~~~-~~~~~~~~~~~~g~l~dr~grr~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~~~~~~~ 182 (265)
....+ +++...+|.+...++-++= ||.......+ ...+-.+.+ ....+.++.++...+.|+..|-..+..
T Consensus 286 ~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl~ 364 (406)
T KOG1479|consen 286 LLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSLI 364 (406)
T ss_pred HHHHHHhHHHHHhhhhhhhcccCCC-CceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhhe
Confidence 33344 6677777866666554443 3333222221 222222221 114556777888888999999888999
Q ss_pred hhhcccccCCCcchhhHHHHHhhhhHHHHHHHHH
Q 024637 183 TIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLV 216 (265)
Q Consensus 183 ~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i 216 (265)
..+.++-.|++++-.+..+...+-..|-..|..+
T Consensus 365 m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 365 MMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred ehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 9999999998877666666555555555555544
No 276
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.03 E-value=1.5 Score=36.50 Aligned_cols=32 Identities=13% Similarity=0.041 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 024637 161 AVVTTLLLFGVRMCVTGTITVATIYAPEIYPTP 193 (265)
Q Consensus 161 ~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~ 193 (265)
++..++...+.+++.+..+...+...+++ |++
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~ 148 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSE 148 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhcC-CHH
Confidence 44455556667777777777777777664 544
No 277
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=94.81 E-value=2.3 Score=36.51 Aligned_cols=91 Identities=11% Similarity=-0.007 Sum_probs=47.0
Q ss_pred cccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHH
Q 024637 49 FSSFFMLFSRKLIRTTLLLWVLFF-ANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLIL 127 (265)
Q Consensus 49 ~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (265)
..+++.++++++.....+..+++. ..+..++..-....... .|+.+. ..-.+......++..++..++
T Consensus 254 ~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~-----p~~~~~------~~f~g~~~~~~gi~tl~~~l~ 322 (472)
T TIGR00769 254 MESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQY-----PSPNEY------SAFMGDFSTWTGVVSVTMMLL 322 (472)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCHHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 356667777777766655555543 23333322222221111 011000 112233344445555566677
Q ss_pred HHHHHhhhchHHHHHHHHHHHHH
Q 024637 128 SAIIVDKIGRKLSMVLMFVSACI 150 (265)
Q Consensus 128 ~g~l~dr~grr~~~~~~~~~~~~ 150 (265)
.+++.+|+|-+...++.-++..+
T Consensus 323 ~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 323 SGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHH
Confidence 79999999998777666555544
No 278
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.62 E-value=0.079 Score=44.40 Aligned_cols=116 Identities=9% Similarity=-0.089 Sum_probs=60.0
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH-------------------
Q 024637 112 VDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVR------------------- 172 (265)
Q Consensus 112 ~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------------------- 172 (265)
+-..+..+...+.+....++.||+|-|+.++.+.....++.-+.....+.+.........|
T Consensus 336 ~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~ 415 (498)
T KOG0637|consen 336 LGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAI 415 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHH
Confidence 4455666677788899999999999555544444423332222222222222222222222
Q ss_pred --HHHhhhhhhhhhhcccccCCC--cchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchh
Q 024637 173 --MCVTGTITVATIYAPEIYPTP--ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLR 227 (265)
Q Consensus 173 --~~~~~~~~~~~~~~~e~~p~~--~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~ 227 (265)
+-....+.+.++..+...... -+|...|+.+....+.+++.....|.+.+..|..
T Consensus 416 ~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~ 474 (498)
T KOG0637|consen 416 LGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGG 474 (498)
T ss_pred hCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCc
Confidence 111112222333333222222 2355566667777788888888778877776543
No 279
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=94.13 E-value=0.42 Score=39.42 Aligned_cols=58 Identities=17% Similarity=0.120 Sum_probs=46.5
Q ss_pred HHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcc
Q 024637 168 LFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH 225 (265)
Q Consensus 168 ~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~ 225 (265)
..+.++.....+....+..+++.|+..-|+.+.+.++..++|+-.-..+..++.|..+
T Consensus 376 y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 376 YAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 3444555555566778889999999999999999999999999888888888887543
No 280
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.96 E-value=0.96 Score=35.62 Aligned_cols=130 Identities=18% Similarity=0.093 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchH--HHHH
Q 024637 65 LLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRK--LSMV 142 (265)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr--~~~~ 142 (265)
++..+-.......|....+|.|.+..+.. + .--+.++.-++++.++|+-+..++..|-..| ..+.
T Consensus 252 LLG~iqsLFE~smytFVFLWTPaLspn~e----------~---iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymq 318 (454)
T KOG4332|consen 252 LLGAIQSLFEGSMYTFVFLWTPALSPNDE----------E---IPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQ 318 (454)
T ss_pred HHHHHHHHHhhhhheeeeeecccCCCCcc----------c---CCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHH
Confidence 33333333344444445667776652111 1 1225556666677778877777766654433 3344
Q ss_pred HHHHHHHHHHHHHhh----c---chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhh
Q 024637 143 LMFVSACIFLLPLVF----H---QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGK 207 (265)
Q Consensus 143 ~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ 207 (265)
+..++..+...+... + .+...-++..+++-.++|..+|...-+=++..|.+.|++.+.+...--+
T Consensus 319 ivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLn 390 (454)
T KOG4332|consen 319 IVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLN 390 (454)
T ss_pred HHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhh
Confidence 444444433332222 1 1233345566667778889999999999999999999887766544333
No 281
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=93.76 E-value=3.2 Score=33.99 Aligned_cols=135 Identities=15% Similarity=0.039 Sum_probs=64.7
Q ss_pred CCCchHHHHHHHHHhhhhHHHHHHHHHHhhhc-hHHH---HHHHHHH---HHHHHHHHhh--cchhHHHHHHHHHHHHHH
Q 024637 105 SKDNSLYVDVFIASLAELPGLILSAIIVDKIG-RKLS---MVLMFVS---ACIFLLPLVF--HQSAVVTTLLLFGVRMCV 175 (265)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-rr~~---~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~g~~~ 175 (265)
....+.+.+...+.....+|+.+.-++.|.-- .|-+ ++.+.+. ..+..+.++. .++.+.+++..++.|.-.
T Consensus 40 ~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LV 119 (508)
T COG4262 40 GGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLV 119 (508)
T ss_pred CceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 33345555555555555666666666555322 2111 1112111 1111112222 446677788888888888
Q ss_pred hhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHH-hhcchhHHHHHHHHHHHHHH
Q 024637 176 TGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLV-TSCHLRLAVILFEVVFVLAI 241 (265)
Q Consensus 176 ~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~-~~~~~~~~~~~~~~~~~i~~ 241 (265)
|.-.|....+...-.. .-....+.....-.+|+..+.+..+++. ...|......+.+.+.++++
T Consensus 120 G~EiPL~mrml~~r~a--~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aA 184 (508)
T COG4262 120 GAEIPLLMRMLQRRQA--KAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAA 184 (508)
T ss_pred hcchHHHHHHHHHHHH--HHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHH
Confidence 8888888877765111 1111122222234466666655555443 33343333334444444333
No 282
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=93.31 E-value=2.4 Score=36.08 Aligned_cols=32 Identities=13% Similarity=0.001 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 024637 161 AVVTTLLLFGVRMCVTGTITVATIYAPEIYPTP 193 (265)
Q Consensus 161 ~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~ 193 (265)
.+..++..++.|++.+...+...++.+ .+|++
T Consensus 106 f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~ 137 (437)
T TIGR00939 106 FVTTMASVVIINSGMALLQGSLFGLAG-VFPST 137 (437)
T ss_pred HHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH
Confidence 445556666777787777777777777 46654
No 283
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=92.43 E-value=2.3 Score=36.56 Aligned_cols=72 Identities=13% Similarity=0.061 Sum_probs=37.5
Q ss_pred hhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhh-----c-----------chhHHHHHHHHHHHHHHHH
Q 024637 180 TVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTS-----C-----------HLRLAVILFEVVFVLAIAS 243 (265)
Q Consensus 180 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~-----~-----------~~~~~~~~~~~~~~i~~~~ 243 (265)
...-.+.-.+..++.++-+........++|-+++-.++-.+-+. + .....+.+.+.+.++..+.
T Consensus 137 IAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~ 216 (544)
T PF13000_consen 137 IAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTIL 216 (544)
T ss_pred ceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHH
Confidence 34445555667777777765554455556666665554433211 0 1112334455555555566
Q ss_pred HhcCCccc
Q 024637 244 SLLFPFET 251 (265)
Q Consensus 244 ~~~~~~~~ 251 (265)
..++.+|.
T Consensus 217 v~~~k~E~ 224 (544)
T PF13000_consen 217 VAFFKKEK 224 (544)
T ss_pred HheEeecc
Confidence 66665553
No 284
>PRK10263 DNA translocase FtsK; Provisional
Probab=91.72 E-value=7.1 Score=37.74 Aligned_cols=23 Identities=22% Similarity=0.310 Sum_probs=14.4
Q ss_pred HHhhhhHHHHHHHHHHhhhchHH
Q 024637 117 ASLAELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 117 ~~~~~~~~~~~~g~l~dr~grr~ 139 (265)
-+.++.+|.++...+..-+|--.
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFGl~A 83 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFGVMA 83 (1355)
T ss_pred ccccchHHHHHHHHHHHHHhHHH
Confidence 34666677777666666667433
No 285
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=91.34 E-value=1.8 Score=30.68 Aligned_cols=36 Identities=11% Similarity=0.059 Sum_probs=29.5
Q ss_pred hhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHH
Q 024637 177 GTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMV 212 (265)
Q Consensus 177 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~ 212 (265)
+..++.|...+...+++..|+..|+-.+-.|++.+.
T Consensus 110 gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 110 GLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 334788999999999999999999998888876554
No 286
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=91.31 E-value=4.2 Score=33.03 Aligned_cols=71 Identities=11% Similarity=0.148 Sum_probs=46.5
Q ss_pred hhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 024637 119 LAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIY 190 (265)
Q Consensus 119 ~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~ 190 (265)
+.-+..+++.+.+.+++|-|.++.++..........-. -+.+...+......|++.+..++.--++++++-
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl-~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAANL-EPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhc-chhHHhhccHHHhhccccccccccCcceecHHH
Confidence 34456677777999999999998877666555433221 233344555666778887777766666666653
No 287
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=90.35 E-value=0.73 Score=36.90 Aligned_cols=134 Identities=10% Similarity=0.055 Sum_probs=77.6
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 024637 111 YVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIY 190 (265)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~ 190 (265)
+.....-.+...+.-+......||+.--.-..+..++.+.++++.+++.+.+.-+....+..++.|..-. .+.-.+..+
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEi-TFL~lss~Y 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEI-TFLALSSRY 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCccee-ehhhhhccC
Confidence 3334444456666777778888886433334556677778888888888888777777777766665533 333333344
Q ss_pred CCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhh--cchhHHHHHHHHHHHHHHHHHhcCCc
Q 024637 191 PTPARTTGFGVASSLGKVGGMVCPLVAVGLVTS--CHLRLAVILFEVVFVLAIASSLLFPF 249 (265)
Q Consensus 191 p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~ 249 (265)
|+..- .++. .....++.+|..-...+.+. ...+..+++...+..+.++..+++.+
T Consensus 144 ~~~~i---~~WS-SGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~ 200 (409)
T KOG3880|consen 144 PSIVI---AGWS-SGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLK 200 (409)
T ss_pred CCcee---cccc-CCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeC
Confidence 43221 1111 11223445555555555542 34566777777777666666666653
No 288
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.20 E-value=2.2 Score=28.01 Aligned_cols=27 Identities=15% Similarity=0.146 Sum_probs=17.0
Q ss_pred hhhhHHHHHHHHHHhhh-chHHHHHHHH
Q 024637 119 LAELPGLILSAIIVDKI-GRKLSMVLMF 145 (265)
Q Consensus 119 ~~~~~~~~~~g~l~dr~-grr~~~~~~~ 145 (265)
+++++.....||+.||+ |.++..++.+
T Consensus 53 IsGilVGa~iG~llD~~agTsPwglIv~ 80 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTSPWGLIVF 80 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 44555667789999996 4554444333
No 289
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=87.13 E-value=19 Score=31.26 Aligned_cols=73 Identities=14% Similarity=0.240 Sum_probs=48.0
Q ss_pred HHHHHHHHhhhhhhhhhhcccccCCC-cchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 024637 168 LFGVRMCVTGTITVATIYAPEIYPTP-ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLA 240 (265)
Q Consensus 168 ~~~~g~~~~~~~~~~~~~~~e~~p~~-~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~ 240 (265)
.+..++........--..+.+.+|.+ .+..-+|-.+...++-..+..++++.+....||.....+...+.++.
T Consensus 289 vi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit 362 (491)
T PF03219_consen 289 VIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILIT 362 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHH
Confidence 34455555555555666777788765 45666666666666555666688888899999987776665555443
No 290
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=86.70 E-value=3.9 Score=33.56 Aligned_cols=19 Identities=11% Similarity=0.169 Sum_probs=12.5
Q ss_pred HhhhchHHHHHHHHHHHHH
Q 024637 132 VDKIGRKLSMVLMFVSACI 150 (265)
Q Consensus 132 ~dr~grr~~~~~~~~~~~~ 150 (265)
.||+.-.|++.+..-+.++
T Consensus 208 ~e~ft~sKllav~~si~GV 226 (416)
T KOG2765|consen 208 VERFTLSKLLAVFVSIAGV 226 (416)
T ss_pred cchhhHHHHHHHHHhhccE
Confidence 7999888877554444433
No 291
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=86.68 E-value=18 Score=30.32 Aligned_cols=39 Identities=15% Similarity=-0.004 Sum_probs=25.8
Q ss_pred chHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHH
Q 024637 108 NSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFV 146 (265)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~ 146 (265)
..+.....+-+....+...+.|...|+..|+|++....+
T Consensus 63 ~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~ 101 (503)
T KOG2601|consen 63 LLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLL 101 (503)
T ss_pred hhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHh
Confidence 334444445555556666777888899999998765544
No 292
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=84.18 E-value=2.8 Score=34.36 Aligned_cols=95 Identities=20% Similarity=0.097 Sum_probs=68.7
Q ss_pred HHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhh
Q 024637 127 LSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLG 206 (265)
Q Consensus 127 ~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~ 206 (265)
..-.+.|-..-|++++.-.+.......++.+.++.+..=++-+..|.... .-...++++-+..+++++.++.|.+....
T Consensus 61 pvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~ 139 (433)
T KOG3810|consen 61 PVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYKRVTGYCRAAF 139 (433)
T ss_pred HHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HHHhhhheeeeecCHHHHHHHHHHhHHHH
Confidence 34457898888988888777777788888888887776666666665433 23567788888889999989888887776
Q ss_pred hHHHHHHHHHHHHHHh
Q 024637 207 KVGGMVCPLVAVGLVT 222 (265)
Q Consensus 207 ~~g~~~~~~i~~~l~~ 222 (265)
-.|-..|..++-.+..
T Consensus 140 L~g~~~g~vlaQlLvs 155 (433)
T KOG3810|consen 140 LVGKFVGSVLAQLLVS 155 (433)
T ss_pred HHHhHHHhHHHHHHhh
Confidence 6666666666555543
No 293
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=84.14 E-value=12 Score=32.52 Aligned_cols=27 Identities=7% Similarity=-0.170 Sum_probs=12.2
Q ss_pred chHHHHHHHHHhhhhHHHHHHHHHHhh
Q 024637 108 NSLYVDVFIASLAELPGLILSAIIVDK 134 (265)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~g~l~dr 134 (265)
++-+.+.+...+..++.++++|+.+-|
T Consensus 359 s~RGsLmT~~~~l~v~~G~~agY~s~r 385 (628)
T KOG1278|consen 359 SSRGSLMTAMVLLFVFMGFVAGYVSAR 385 (628)
T ss_pred cccccHHHHHHHHHHHHHHhhhhhhhh
Confidence 333334444334444455555555544
No 294
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=83.82 E-value=15 Score=32.18 Aligned_cols=26 Identities=15% Similarity=0.234 Sum_probs=15.2
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhch
Q 024637 112 VDVFIASLAELPGLILSAIIVDKIGR 137 (265)
Q Consensus 112 ~~~~~~~~~~~~~~~~~g~l~dr~gr 137 (265)
.....+.+.+.+++.+++++...+|.
T Consensus 301 ~~i~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 301 AAIILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHcCC
Confidence 33444455666666666666666654
No 295
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=83.62 E-value=0.89 Score=35.01 Aligned_cols=32 Identities=19% Similarity=0.106 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 024637 123 PGLILSAIIVDKIGRKLSMVLMFVSACIFLLP 154 (265)
Q Consensus 123 ~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 154 (265)
+..+.+-+++.|+.-|.+.+++.+++.+..+.
T Consensus 255 lAVigGk~lAskIS~rtVt~~ggi~Fi~Fgl~ 286 (294)
T KOG2881|consen 255 LAVIGGKYLASKISVRTVTLIGGILFIIFGLV 286 (294)
T ss_pred HHHhhhHHHhhhheeEEEEEecchhHHHHHHH
Confidence 33344456788898888777776666655443
No 296
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=81.15 E-value=14 Score=24.80 Aligned_cols=42 Identities=17% Similarity=0.173 Sum_probs=25.9
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q 024637 110 LYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIF 151 (265)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~ 151 (265)
.+.......++..++..+.+.+.|..|.+..+.+...+..++
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 344455556777777777777777777666555544444433
No 297
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=77.40 E-value=7 Score=25.73 Aligned_cols=50 Identities=8% Similarity=-0.107 Sum_probs=39.4
Q ss_pred chHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh
Q 024637 108 NSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF 157 (265)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 157 (265)
...+.....++-..++.++++++..|+..+.+-=.++..++.++..++.+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 44577777888888899999999999998887777787777777665544
No 298
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=76.91 E-value=23 Score=28.19 Aligned_cols=8 Identities=25% Similarity=0.310 Sum_probs=3.0
Q ss_pred hHHHHHHH
Q 024637 161 AVVTTLLL 168 (265)
Q Consensus 161 ~~~~~~~~ 168 (265)
.|...+..
T Consensus 23 ~~l~~~~~ 30 (284)
T PF12805_consen 23 PWLLILVL 30 (284)
T ss_pred cHHHHHHH
Confidence 33333333
No 299
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.39 E-value=7.7 Score=25.57 Aligned_cols=34 Identities=9% Similarity=-0.039 Sum_probs=27.0
Q ss_pred CCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcc
Q 024637 192 TPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH 225 (265)
Q Consensus 192 ~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~ 225 (265)
+..++.+.++--..-.+++++.....||+++++-
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3467777777777777888888889999999763
No 300
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=76.14 E-value=15 Score=29.88 Aligned_cols=65 Identities=12% Similarity=0.039 Sum_probs=51.4
Q ss_pred HhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHH
Q 024637 155 LVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 155 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
..+.++.|...+..+.-|+..|..+...+--+.+-.++++|--+++.....-.+|..++.+++-.
T Consensus 336 ~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalp 400 (409)
T KOG3880|consen 336 YWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALP 400 (409)
T ss_pred HHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhcc
Confidence 33478888888888888888888888888888887888899999998888777877777666543
No 301
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=75.76 E-value=66 Score=29.59 Aligned_cols=25 Identities=24% Similarity=0.481 Sum_probs=17.9
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhh
Q 024637 111 YVDVFIASLAELPGLILSAIIVDKI 135 (265)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~g~l~dr~ 135 (265)
.+...+..+.++++.++.-.+.|+.
T Consensus 160 ~~~sl~l~i~~l~~p~~~q~viD~V 184 (709)
T COG2274 160 LLASLLLQLLALATPLFSQIVIDKV 184 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444555566777888888999986
No 302
>PRK02237 hypothetical protein; Provisional
Probab=74.95 E-value=21 Score=23.60 Aligned_cols=49 Identities=8% Similarity=-0.062 Sum_probs=38.5
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhh
Q 024637 109 SLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF 157 (265)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 157 (265)
..+.....++-..++.++++++..|+...-+-=.++..++.++..++.+
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 3577778888888899999999999988777777777777777655543
No 303
>cd02432 Nodulin-21_like_1 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=71.74 E-value=39 Score=25.80 Aligned_cols=21 Identities=19% Similarity=0.363 Sum_probs=12.0
Q ss_pred hhHHHHHHHHHHhhhchHHHH
Q 024637 121 ELPGLILSAIIVDKIGRKLSM 141 (265)
Q Consensus 121 ~~~~~~~~g~l~dr~grr~~~ 141 (265)
..+.-++.|++.-|+++++..
T Consensus 174 ~~~aL~~~G~~~a~~~~~~~~ 194 (218)
T cd02432 174 TLLALALTGYVSARLGGASVL 194 (218)
T ss_pred HHHHHHHHHHHHHHHCCCCHH
Confidence 445555666666666555443
No 304
>PF12832 MFS_1_like: MFS_1 like family
Probab=71.23 E-value=21 Score=21.95 Aligned_cols=42 Identities=14% Similarity=0.142 Sum_probs=32.1
Q ss_pred cchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 024637 194 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEV 235 (265)
Q Consensus 194 ~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~ 235 (265)
.-..-.|+......+-..+++.+.|.+.|..+..........
T Consensus 32 l~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 32 LSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 445567777788888899999999999999887666554443
No 305
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=71.15 E-value=24 Score=22.58 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=21.0
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024637 52 FFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSS 90 (265)
Q Consensus 52 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (265)
++++.+ +.++..+.+....+...+++-....+.|..+.
T Consensus 7 f~~L~r-~r~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~ 44 (91)
T PF04341_consen 7 FQELVR-RRRRLAWPLSAIFLVLYFGFVLLSAFAPELMA 44 (91)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHc
Confidence 444442 33444444455555555666666777777773
No 306
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=71.09 E-value=28 Score=23.17 Aligned_cols=21 Identities=5% Similarity=0.390 Sum_probs=12.8
Q ss_pred hhhchHHHHHHHHHHHHHHHH
Q 024637 133 DKIGRKLSMVLMFVSACIFLL 153 (265)
Q Consensus 133 dr~grr~~~~~~~~~~~~~~~ 153 (265)
+|+.+|+.+.+.....++..+
T Consensus 84 er~~~~~~~a~~l~~~Gv~li 104 (113)
T PF13536_consen 84 ERLSPRRWLAILLILIGVILI 104 (113)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 678888776555544444443
No 307
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=69.65 E-value=55 Score=30.02 Aligned_cols=49 Identities=14% Similarity=0.156 Sum_probs=29.0
Q ss_pred HHHHHhh----hchHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHh
Q 024637 128 SAIIVDK----IGRKLSMVLMFVSACIFLLPLVF-HQSAVVTTLLLFGVRMCVT 176 (265)
Q Consensus 128 ~g~l~dr----~grr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~ 176 (265)
.+-++|. -||.+-++++.++..++.+...+ .+.+|++....++..++.+
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFI 96 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 3446664 36667777777777766665554 5556665555555544443
No 308
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=67.30 E-value=46 Score=24.24 Aligned_cols=22 Identities=18% Similarity=0.348 Sum_probs=12.5
Q ss_pred hhhHHHHHHHHHHhhhchHHHH
Q 024637 120 AELPGLILSAIIVDKIGRKLSM 141 (265)
Q Consensus 120 ~~~~~~~~~g~l~dr~grr~~~ 141 (265)
...+.-++.|++.-|++.++..
T Consensus 125 ~~~~~L~ilG~~~a~~s~~~~~ 146 (169)
T TIGR00267 125 LTLIALLVLGVYLGRISRENIL 146 (169)
T ss_pred HHHHHHHHHHHHHHHHcCCcHH
Confidence 3344555567777776655443
No 309
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=66.99 E-value=26 Score=24.96 Aligned_cols=73 Identities=8% Similarity=-0.106 Sum_probs=33.5
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHH
Q 024637 51 SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAI 130 (265)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 130 (265)
.+-+....+..+++.+.+.+=....+..+...+++-... + ...++ .+.++.+...++..+..+-.|.
T Consensus 52 ~IP~~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~----~--------~dvP~-~~~~~~S~~~Fg~gllGisYGi 118 (153)
T PF11947_consen 52 AIPEVVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQ----I--------VDVPP-WAVLLVSLVFFGLGLLGISYGI 118 (153)
T ss_pred ccCHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhcc----c--------cccCc-hHHHHHHHHHHHHHHHhhhhhh
Confidence 344555556666666655554444444444433333221 1 12333 2333333333444445555666
Q ss_pred HHhhhc
Q 024637 131 IVDKIG 136 (265)
Q Consensus 131 l~dr~g 136 (265)
++-.|.
T Consensus 119 lSaSWD 124 (153)
T PF11947_consen 119 LSASWD 124 (153)
T ss_pred cccccC
Confidence 666553
No 310
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=66.64 E-value=67 Score=29.53 Aligned_cols=49 Identities=14% Similarity=0.130 Sum_probs=29.4
Q ss_pred HHHHHhh----hchHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHh
Q 024637 128 SAIIVDK----IGRKLSMVLMFVSACIFLLPLVF-HQSAVVTTLLLFGVRMCVT 176 (265)
Q Consensus 128 ~g~l~dr----~grr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~ 176 (265)
.+-++|. -||.+-++++.++.+++.+...+ .+.+|++....++.+++.+
T Consensus 43 a~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 43 AAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFI 96 (701)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 3445664 36677777887777777766655 4555555555554444443
No 311
>PF05884 ZYG-11_interact: Interactor of ZYG-11; InterPro: IPR008574 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=65.70 E-value=69 Score=25.67 Aligned_cols=16 Identities=13% Similarity=0.129 Sum_probs=9.4
Q ss_pred CCcchhhHHHHHhhhh
Q 024637 192 TPARTTGFGVASSLGK 207 (265)
Q Consensus 192 ~~~r~~~~g~~~~~~~ 207 (265)
+..|....|......-
T Consensus 214 ~~~R~~lLg~~vg~s~ 229 (299)
T PF05884_consen 214 GTNRQKLLGIVVGTSF 229 (299)
T ss_pred CcchHHHHHHHHHHHH
Confidence 4467777766654443
No 312
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=65.56 E-value=89 Score=26.92 Aligned_cols=49 Identities=14% Similarity=0.083 Sum_probs=22.5
Q ss_pred HHHHHHHHHHhhcCCCCCCCcccccCCCCCchHHHHHHHHHhhhhHHHHHHHHHHhhhchHH
Q 024637 78 YYGAVLLTSKLSSGDSKCGSKVLHVDKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 139 (265)
.|.+..|........+ .+..-.++ ++...+.-+--++...+.-|-|---
T Consensus 440 SYLMVWwa~~iGeT~g-----------Ip~eIMGL--TiLAAGTSIPDlitSvIVARKGlGD 488 (588)
T KOG1307|consen 440 SYLMVWWANIIGETLG-----------IPDEIMGL--TILAAGTSIPDLITSVIVARKGLGD 488 (588)
T ss_pred HHHHHHHHHHcccccC-----------CCHHHhhh--hhhhcCCchHHhhHhhhhccccccc
Confidence 3455555555554333 44333332 3333444444455555555655433
No 313
>PTZ00370 STEVOR; Provisional
Probab=64.80 E-value=21 Score=28.19 Aligned_cols=27 Identities=11% Similarity=0.132 Sum_probs=13.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 226 LRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 226 ~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
+..+.+++.++.++..++..|+.++++
T Consensus 257 ygiaalvllil~vvliilYiwlyrrRK 283 (296)
T PTZ00370 257 YGIAALVLLILAVVLIILYIWLYRRRK 283 (296)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 334444455555555555555553333
No 314
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=63.33 E-value=62 Score=24.33 Aligned_cols=13 Identities=31% Similarity=0.526 Sum_probs=7.9
Q ss_pred hhhhHHHHHHHHH
Q 024637 119 LAELPGLILSAII 131 (265)
Q Consensus 119 ~~~~~~~~~~g~l 131 (265)
++-++|.++++.+
T Consensus 57 ~~F~~G~~~~~~i 69 (209)
T PF06912_consen 57 LSFILGAFLAGLI 69 (209)
T ss_pred HHHHHHHHHHHHH
Confidence 4445666666666
No 315
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=62.67 E-value=41 Score=22.06 Aligned_cols=28 Identities=11% Similarity=0.166 Sum_probs=13.3
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHH
Q 024637 124 GLILSAIIVDKIGRKLSMVLMFVSACIF 151 (265)
Q Consensus 124 ~~~~~g~l~dr~grr~~~~~~~~~~~~~ 151 (265)
|.+++-||=.+++-.+.+.+.+++.+++
T Consensus 59 G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 59 GVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 3334444444577665554444444433
No 316
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=62.47 E-value=1e+02 Score=26.45 Aligned_cols=73 Identities=12% Similarity=0.156 Sum_probs=35.1
Q ss_pred HHHHHHHHHhhhchHHHH-----HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhh
Q 024637 124 GLILSAIIVDKIGRKLSM-----VLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTG 198 (265)
Q Consensus 124 ~~~~~g~l~dr~grr~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~ 198 (265)
-.++.-++.+.+.++++- ++|+.++....+++.++.... +..+. .++..++......|+..++....|+..
T Consensus 307 LTF~~fflfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEhi~-F~~AY---liAa~a~i~Li~~Y~~~vl~~~k~~~~ 382 (430)
T PF06123_consen 307 LTFLAFFLFELLSKLRIHPIQYLLVGLALVLFYLLLLSLSEHIG-FNLAY---LIAALACIGLISLYLSSVLKSWKRGLI 382 (430)
T ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhhc-hHHHH---HHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 344555666777666553 444444444444444433321 11111 122233334555666666666666665
Q ss_pred HH
Q 024637 199 FG 200 (265)
Q Consensus 199 ~g 200 (265)
++
T Consensus 383 ~~ 384 (430)
T PF06123_consen 383 FA 384 (430)
T ss_pred HH
Confidence 54
No 317
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=62.38 E-value=52 Score=29.90 Aligned_cols=55 Identities=5% Similarity=-0.071 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHH
Q 024637 164 TTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAV 218 (265)
Q Consensus 164 ~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~ 218 (265)
.+.-.++.+.+-........-..-+-.|+++++.+.++......+|..+...+..
T Consensus 568 q~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~ 622 (654)
T TIGR00926 568 QIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAE 622 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444443333333344444568888888888888888888888777765
No 318
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=61.91 E-value=40 Score=30.07 Aligned_cols=64 Identities=8% Similarity=-0.101 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhc
Q 024637 161 AVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSC 224 (265)
Q Consensus 161 ~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~ 224 (265)
.++.+--.++.|++-........-+.-+-+|+++|+.+.++......+|..++..+........
T Consensus 458 i~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t 521 (571)
T KOG1237|consen 458 ILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFST 521 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3455555667776666555555666666789999999999999999999999999886655443
No 319
>PF01988 VIT1: VIT family; InterPro: IPR008217 Proteins containing this entry have no known function and are predicted to be integral membrane proteins. They include the Ccc1 protein from Saccharomyces cerevisiae (Baker's yeast) (P47818 from SWISSPROT) that may have a role in regulating calcium levels [].
Probab=61.82 E-value=68 Score=24.32 Aligned_cols=21 Identities=10% Similarity=0.158 Sum_probs=10.9
Q ss_pred hhhhHHHHHHHHHHhhhchHH
Q 024637 119 LAELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 119 ~~~~~~~~~~g~l~dr~grr~ 139 (265)
+...+.-.+.|++..|+..++
T Consensus 168 ~~~~~~L~~~G~~~a~~~~~~ 188 (213)
T PF01988_consen 168 AVTILALFILGYFKARISGQS 188 (213)
T ss_pred HHHHHHHHHHHHHHHHHcCCc
Confidence 334444455666666665443
No 320
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=61.64 E-value=84 Score=25.32 Aligned_cols=19 Identities=21% Similarity=0.293 Sum_probs=9.8
Q ss_pred hchHHHHHHHHHHHHHHHH
Q 024637 135 IGRKLSMVLMFVSACIFLL 153 (265)
Q Consensus 135 ~grr~~~~~~~~~~~~~~~ 153 (265)
||.+|.=.++.+..++..+
T Consensus 84 fGy~R~eiLaa~~nav~Li 102 (296)
T COG1230 84 FGYKRLEILAAFLNALLLI 102 (296)
T ss_pred ccHhHHHHHHHHHHHHHHH
Confidence 5666655555544444433
No 321
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=60.19 E-value=46 Score=24.64 Aligned_cols=20 Identities=15% Similarity=0.378 Sum_probs=16.2
Q ss_pred hhhhHHHHHHHHHHhhhchH
Q 024637 119 LAELPGLILSAIIVDKIGRK 138 (265)
Q Consensus 119 ~~~~~~~~~~g~l~dr~grr 138 (265)
++..++.++.|++.||..+|
T Consensus 93 ~gfi~aa~l~G~l~~k~~~~ 112 (184)
T COG1268 93 IGFIIAAFLIGLLAEKIRKR 112 (184)
T ss_pred HHHHHHHHHHHHHHHhhhcc
Confidence 55667889999999998753
No 322
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=57.32 E-value=1.3e+02 Score=26.00 Aligned_cols=23 Identities=13% Similarity=0.195 Sum_probs=10.7
Q ss_pred HHHhhhhHHHHHHHHHHhhhchH
Q 024637 116 IASLAELPGLILSAIIVDKIGRK 138 (265)
Q Consensus 116 ~~~~~~~~~~~~~g~l~dr~grr 138 (265)
++++...+.+.++|-+-.|.|-|
T Consensus 335 vYAlTs~i~GY~~gs~Y~r~gG~ 357 (593)
T KOG1277|consen 335 VYALTSPINGYVSGSFYARLGGR 357 (593)
T ss_pred HHHhcccccccccceeeehhccH
Confidence 33344444444444445566533
No 323
>cd02433 Nodulin-21_like_2 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_2: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=56.88 E-value=90 Score=24.16 Aligned_cols=21 Identities=5% Similarity=-0.005 Sum_probs=11.7
Q ss_pred hhHHHHHHHHHHhhhchHHHH
Q 024637 121 ELPGLILSAIIVDKIGRKLSM 141 (265)
Q Consensus 121 ~~~~~~~~g~l~dr~grr~~~ 141 (265)
..+.-.+.|++.-|+++++..
T Consensus 189 ~~~~L~~lG~~~a~~s~~~~~ 209 (234)
T cd02433 189 VGLALLATGAVTGLLSGRSPG 209 (234)
T ss_pred HHHHHHHHHHHHHhhCCCcHH
Confidence 344455566666666655443
No 324
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=56.80 E-value=34 Score=19.31 Aligned_cols=32 Identities=19% Similarity=0.079 Sum_probs=17.8
Q ss_pred hhhhHHHHHHHHHHhh-hchHHHHHHHHHHHHH
Q 024637 119 LAELPGLILSAIIVDK-IGRKLSMVLMFVSACI 150 (265)
Q Consensus 119 ~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~ 150 (265)
+..++.....|+..|+ ++.++...+..++.++
T Consensus 11 ~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 11 AAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 4445556667777775 5765555544444333
No 325
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=56.41 E-value=97 Score=24.36 Aligned_cols=65 Identities=14% Similarity=0.040 Sum_probs=39.3
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhh
Q 024637 159 QSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTS 223 (265)
Q Consensus 159 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~ 223 (265)
+..|..+....+.-...++-+....+++.+.+|+++|-++.-+.-...-+-.++.-....++.+.
T Consensus 14 ~~~~~~l~tl~~lE~vL~iDN~iviai~~~~Lp~~qr~ral~~Gl~~A~v~R~~ll~~~s~Ll~l 78 (254)
T COG0861 14 PAAWVALLTLILLEIVLGIDNAIVIAILASKLPPKQRKKALFIGLAGALVLRIILLASISWLLTL 78 (254)
T ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444444555555667777888899999999988766655433333333444444455555554
No 326
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=55.73 E-value=46 Score=26.36 Aligned_cols=25 Identities=12% Similarity=0.166 Sum_probs=12.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCcc
Q 024637 226 LRLAVILFEVVFVLAIASSLLFPFE 250 (265)
Q Consensus 226 ~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (265)
+..+.+++.++.++..++..|+.++
T Consensus 261 cgiaalvllil~vvliiLYiWlyrr 285 (295)
T TIGR01478 261 YGIAALVLIILTVVLIILYIWLYRR 285 (295)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444555555555555555433
No 327
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=55.19 E-value=48 Score=31.36 Aligned_cols=22 Identities=14% Similarity=0.090 Sum_probs=9.9
Q ss_pred hhhhHHHHHHHHHHhhhchHHH
Q 024637 119 LAELPGLILSAIIVDKIGRKLS 140 (265)
Q Consensus 119 ~~~~~~~~~~g~l~dr~grr~~ 140 (265)
++.-+.-++....+-|-|.-.+
T Consensus 977 ~GTSIPDlisSvivArkG~gdM 998 (1096)
T TIGR00927 977 AGTSIPDLITSVIVARKGLGDM 998 (1096)
T ss_pred hhcccHHHHHHHHHHHccCCcc
Confidence 3444444444444444454433
No 328
>COG2119 Predicted membrane protein [Function unknown]
Probab=53.44 E-value=64 Score=23.85 Aligned_cols=37 Identities=24% Similarity=0.325 Sum_probs=28.4
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 024637 118 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLP 154 (265)
Q Consensus 118 ~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 154 (265)
.+++.++.+.+.++++|+..|.+-.++.++..+..+.
T Consensus 144 ~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal~ 180 (190)
T COG2119 144 ILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFALV 180 (190)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHH
Confidence 3566778888899999999999888777766665543
No 329
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=52.45 E-value=1.6e+02 Score=25.75 Aligned_cols=78 Identities=17% Similarity=0.128 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcccccCCC-cchhhHHHHHhhhhHH-HHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 024637 165 TLLLFGVRMCVTGTITVATIYAPEIYPTP-ARTTGFGVASSLGKVG-GMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIA 242 (265)
Q Consensus 165 ~~~~~~~g~~~~~~~~~~~~~~~e~~p~~-~r~~~~g~~~~~~~~g-~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~ 242 (265)
......++++....-+.--.-+.+.+|.+ .+..-+|-.+...++- ..+.-..++.+....||.....+..++.++..+
T Consensus 288 al~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~ 367 (509)
T COG3202 288 ALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGV 367 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 33444566666666677777888888864 4666666666655544 556677788888888998777666666655543
No 330
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=51.47 E-value=1.4e+02 Score=24.81 Aligned_cols=28 Identities=29% Similarity=0.417 Sum_probs=13.3
Q ss_pred CCCcchhhHHHHHhhhhHHHHHHHHHHHH
Q 024637 191 PTPARTTGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 191 p~~~r~~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
|.+.|+. ......++|.+.+--|++...
T Consensus 90 ~~~~~~~-~~~~~~~~N~~~lglpi~~~l 117 (385)
T PF03547_consen 90 PKEWRGV-FVLAASFGNTGFLGLPILQAL 117 (385)
T ss_pred CcccceE-EEecccCCcchhhHHHHHHHH
Confidence 3444433 333344566665555555443
No 331
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=51.20 E-value=2.9e+02 Score=28.26 Aligned_cols=8 Identities=38% Similarity=0.841 Sum_probs=4.8
Q ss_pred cccccccc
Q 024637 50 SSFFMLFS 57 (265)
Q Consensus 50 ~~~~~l~~ 57 (265)
.++..+|+
T Consensus 45 ~~~~~~~~ 52 (1466)
T PTZ00265 45 IPFFLPFK 52 (1466)
T ss_pred ccHHHHHh
Confidence 35666664
No 332
>PRK03818 putative transporter; Validated
Probab=48.32 E-value=2e+02 Score=25.65 Aligned_cols=37 Identities=16% Similarity=0.154 Sum_probs=22.2
Q ss_pred hhhhhhhhcccc-cCCCcchhhHHHHHhhhhHHHHHHH
Q 024637 178 TITVATIYAPEI-YPTPARTTGFGVASSLGKVGGMVCP 214 (265)
Q Consensus 178 ~~~~~~~~~~e~-~p~~~r~~~~g~~~~~~~~g~~~~~ 214 (265)
..++...++.|. .+.+.-..+++..+-++-++-++..
T Consensus 505 t~tp~l~~a~~~~~~~~~~~~gYa~~Yp~~~~~~i~~~ 542 (552)
T PRK03818 505 TDPPALAFANNLHPTSGAAALSYATVYPLVMFLRIITP 542 (552)
T ss_pred CCcHHHHHHhcccCCCCCcccchHHHHHHHHHHHHHHH
Confidence 346666777775 5555456666666666655555444
No 333
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=48.00 E-value=1.9e+02 Score=27.03 Aligned_cols=26 Identities=8% Similarity=-0.192 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHhhhhhhhhhhccccc
Q 024637 165 TLLLFGVRMCVTGTITVATIYAPEIY 190 (265)
Q Consensus 165 ~~~~~~~g~~~~~~~~~~~~~~~e~~ 190 (265)
+++....|.+.|...++...++..+.
T Consensus 187 l~~a~~gG~~~Gaa~Gv~~Gli~~l~ 212 (764)
T TIGR02865 187 LLISYIGGSGAGAAGGVVIGVILGLA 212 (764)
T ss_pred HHHHHhcCchHhHHHHHHHHHHHHhc
Confidence 33344455555555555555554443
No 334
>PRK11715 inner membrane protein; Provisional
Probab=47.92 E-value=1.8e+02 Score=25.01 Aligned_cols=72 Identities=10% Similarity=0.155 Sum_probs=35.8
Q ss_pred HHHHHHHHHhhhchHHH-----HHHHHHHHHHHHHHHhhcch--hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcch
Q 024637 124 GLILSAIIVDKIGRKLS-----MVLMFVSACIFLLPLVFHQS--AVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPART 196 (265)
Q Consensus 124 ~~~~~g~l~dr~grr~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~ 196 (265)
-.+.+-++.+..+++++ +++|+.++....+++.++.. +...+.. +..++......|+.-+.....||
T Consensus 313 LTF~~fFlfE~~~~~~iHpiQYlLVGlAl~lFYLLLLSlSEHigF~~AYli------Aa~a~v~li~~Y~~~vl~~~k~g 386 (436)
T PRK11715 313 LTFAAFFLFELLKKLRIHPVQYLLVGLALVLFYLLLLSLSEHIGFTLAYLI------AALACVLLIGFYLSAVLRSWKRG 386 (436)
T ss_pred HHHHHHHHHHHhcCceecHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHH------HHHHHHHHHHHHHHHHHhcchHH
Confidence 34455566777766654 34454444444445544333 2222222 22233344555666666666676
Q ss_pred hhHHH
Q 024637 197 TGFGV 201 (265)
Q Consensus 197 ~~~g~ 201 (265)
..++.
T Consensus 387 ~~~~~ 391 (436)
T PRK11715 387 LLFAA 391 (436)
T ss_pred HHHHH
Confidence 66543
No 335
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=47.09 E-value=1.3e+02 Score=23.57 Aligned_cols=16 Identities=13% Similarity=-0.006 Sum_probs=6.6
Q ss_pred HHHHHHHhhcchhHHH
Q 024637 215 LVAVGLVTSCHLRLAV 230 (265)
Q Consensus 215 ~i~~~l~~~~~~~~~~ 230 (265)
++.|.+.|+.+.+...
T Consensus 54 ~~~G~l~d~~gp~~~l 69 (250)
T PF06813_consen 54 ILAGLLYDRFGPWVVL 69 (250)
T ss_pred HHHHHHHHhcchHHHH
Confidence 3334444444443333
No 336
>PF15188 CCDC-167: Coiled-coil domain-containing protein 167
Probab=47.09 E-value=31 Score=21.85 Aligned_cols=22 Identities=27% Similarity=0.463 Sum_probs=12.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHH
Q 024637 57 SRKLIRTTLLLWVLFFANVFSY 78 (265)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~ 78 (265)
++..++.+++...+++.+...|
T Consensus 63 rkENrK~~~ls~~l~~v~~LvY 84 (85)
T PF15188_consen 63 RKENRKSMLLSVALFFVCFLVY 84 (85)
T ss_pred HHhhhhhHHHHHHHHHHHHHHc
Confidence 3445666666666666555544
No 337
>cd02435 CCC1 CCC1. CCC1: This domain is present in the CCC1, an iron and manganese transporter of Saccharomyces cerevisiae. CCC1 is a transmembrane protein that is located in the vacuole and transfers the iron and manganese ions from the cytosol to the vacuole. This domain may be unique to certain fungi and plants.
Probab=46.65 E-value=1.4e+02 Score=23.29 Aligned_cols=15 Identities=13% Similarity=0.098 Sum_probs=8.2
Q ss_pred hHHHHHHHHHHhhhc
Q 024637 122 LPGLILSAIIVDKIG 136 (265)
Q Consensus 122 ~~~~~~~g~l~dr~g 136 (265)
.+.-++.|++..|++
T Consensus 193 ~~aL~ilG~~~s~~s 207 (241)
T cd02435 193 LVALFVFGYVKTWFT 207 (241)
T ss_pred HHHHHHHHHHHHhhc
Confidence 344445666666655
No 338
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=46.22 E-value=1.6e+02 Score=23.88 Aligned_cols=91 Identities=12% Similarity=0.023 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHhhhchHHH-----HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCcch
Q 024637 122 LPGLILSAIIVDKIGRKLS-----MVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGTITVATIYAPEIYPTPART 196 (265)
Q Consensus 122 ~~~~~~~g~l~dr~grr~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~ 196 (265)
++..-+++.+++|-|.-++ ++.+.....+. .....++|.-+....+ .+...+...++.+.....++--
T Consensus 21 LllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~---~~~t~spw~gl~~a~l----~g~l~~ll~a~~ti~l~~nqii 93 (304)
T COG1079 21 LLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALF---AYGTGSPWLGLLAAAL----VGALFGLLHAFLTIKLRANQII 93 (304)
T ss_pred HHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHH---HHccccHHHHHHHHHH----HHHHHHHHHHHHHHhhccccch
Confidence 3445568889999776553 44443333333 1225556654444443 4445566677777777677777
Q ss_pred hhHHHHHhhhhHHHHHHHHHHHH
Q 024637 197 TGFGVASSLGKVGGMVCPLVAVG 219 (265)
Q Consensus 197 ~~~g~~~~~~~~g~~~~~~i~~~ 219 (265)
++.++......+...++....+.
T Consensus 94 sG~alnl~a~Glt~fl~~~~~~~ 116 (304)
T COG1079 94 SGLALNLLASGLTAFLGQSIFGQ 116 (304)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcc
Confidence 77777766666666666555543
No 339
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=46.01 E-value=2.1e+02 Score=25.56 Aligned_cols=99 Identities=20% Similarity=0.117 Sum_probs=46.1
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH-hhhhhhhhhhccc
Q 024637 110 LYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCV-TGTITVATIYAPE 188 (265)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~e 188 (265)
.++..++..++.-.|.-+..-+. +.|-+.. .++.++..+..+...+....+.-+=.....|... +...++......|
T Consensus 452 ~GL~lFla~vG~~aG~~f~~~l~-~~G~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~t~~l~~a~~ 529 (562)
T TIGR03802 452 LGLALFIAVVGLSAGPQAVTAIK-EMGLTLF-LLGIVVTILPLIITMLIGKYVLKYDPALLLGALAGARTATPALGAVLE 529 (562)
T ss_pred HhHHHHHHHHHHhhhHHHHHHHH-HhhHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhccCCCcHHHHHHHH
Confidence 55556666565555554444442 3444433 3444444444332222111111000111223322 3334666677777
Q ss_pred ccCCCcchhhHHHHHhhhhHHH
Q 024637 189 IYPTPARTTGFGVASSLGKVGG 210 (265)
Q Consensus 189 ~~p~~~r~~~~g~~~~~~~~g~ 210 (265)
..+.+.-..+++..+-++++.-
T Consensus 530 ~~~~~~~~~gYa~~Yp~~~i~~ 551 (562)
T TIGR03802 530 RAGSSVPALGYTITYALGNVLL 551 (562)
T ss_pred hcCCCCcccchHhHHHHHHHHH
Confidence 7766555666777766666443
No 340
>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=45.99 E-value=1.4e+02 Score=23.02 Aligned_cols=21 Identities=14% Similarity=-0.066 Sum_probs=11.8
Q ss_pred hhHHHHHHHHHHhhhchHHHH
Q 024637 121 ELPGLILSAIIVDKIGRKLSM 141 (265)
Q Consensus 121 ~~~~~~~~g~l~dr~grr~~~ 141 (265)
..+.-++.|++.-+++.++..
T Consensus 180 ~~~~L~~~G~~~~~~~~~~~~ 200 (225)
T cd02434 180 VAFTLFLLGSFKSKLYNGKWI 200 (225)
T ss_pred HHHHHHHHHHHHHHhcCCchH
Confidence 344555666666666555443
No 341
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=44.12 E-value=1.7e+02 Score=23.53 Aligned_cols=34 Identities=9% Similarity=0.200 Sum_probs=20.9
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHH
Q 024637 130 IIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVV 163 (265)
Q Consensus 130 ~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (265)
++-||+.|-..+.++....++........+-+|.
T Consensus 119 flkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwv 152 (293)
T COG2962 119 FLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWV 152 (293)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHH
Confidence 3568888888777776666666554444333333
No 342
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=43.99 E-value=39 Score=26.62 Aligned_cols=55 Identities=9% Similarity=0.220 Sum_probs=30.1
Q ss_pred cchhhHHHHHhhhhHHHHHH--HHHHH-HHHh--hcchhHHHHHHHHHHHHHHHHHhcCC
Q 024637 194 ARTTGFGVASSLGKVGGMVC--PLVAV-GLVT--SCHLRLAVILFEVVFVLAIASSLLFP 248 (265)
Q Consensus 194 ~r~~~~g~~~~~~~~g~~~~--~~i~~-~l~~--~~~~~~~~~~~~~~~~i~~~~~~~~~ 248 (265)
.|+.-..+.....++|+++. |++.+ -..+ ...|...+.+.+.+.++-+++..++-
T Consensus 3 ~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifG 62 (267)
T PF07672_consen 3 KKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFG 62 (267)
T ss_pred ccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45555555555666777665 44443 1111 22466666666666666666555554
No 343
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=43.99 E-value=56 Score=18.02 Aligned_cols=10 Identities=20% Similarity=0.136 Sum_probs=4.2
Q ss_pred HHHHHHHHHH
Q 024637 209 GGMVCPLVAV 218 (265)
Q Consensus 209 g~~~~~~i~~ 218 (265)
|+.++..+.+
T Consensus 7 Ga~vGg~l~~ 16 (48)
T PF04226_consen 7 GAFVGGWLFG 16 (48)
T ss_pred HHHHHHHHHH
Confidence 4444444433
No 344
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=43.12 E-value=2.1e+02 Score=24.35 Aligned_cols=12 Identities=17% Similarity=0.130 Sum_probs=5.6
Q ss_pred HHHHHHHHhhhc
Q 024637 125 LILSAIIVDKIG 136 (265)
Q Consensus 125 ~~~~g~l~dr~g 136 (265)
+.+...+.|++-
T Consensus 239 g~l~~~~~~~~~ 250 (403)
T TIGR00836 239 GGLTWLLIDWLK 250 (403)
T ss_pred HHHHHHHHHHHh
Confidence 334444555543
No 345
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=41.88 E-value=34 Score=22.51 Aligned_cols=47 Identities=4% Similarity=-0.210 Sum_probs=32.6
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q 024637 109 SLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPL 155 (265)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 155 (265)
..+.....++-..++.++.+++..|+.-.-+-=.++..++.++..++
T Consensus 56 a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vi 102 (109)
T COG1742 56 AFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVI 102 (109)
T ss_pred hhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeee
Confidence 34566666667778888999999998776666666666665554433
No 346
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=41.77 E-value=1.7e+02 Score=22.93 Aligned_cols=21 Identities=10% Similarity=0.230 Sum_probs=10.9
Q ss_pred hhhhhcccccCCCcchhhHHHHH
Q 024637 181 VATIYAPEIYPTPARTTGFGVAS 203 (265)
Q Consensus 181 ~~~~~~~e~~p~~~r~~~~g~~~ 203 (265)
+..-..+...| .|+....+..
T Consensus 52 i~~~~~~k~lP--rk~~~~~~l~ 72 (249)
T PF10225_consen 52 ILLFQLSKLLP--RKSMFYAVLY 72 (249)
T ss_pred HHHHHHHHHcc--CcchhHHHHh
Confidence 34445567778 3444444433
No 347
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters. Member proteins may have 0, 1, or 2 copies of the TrkA-C potassium uptake domain (IPR006037 from INTERPRO) between the duplications. The duplication appears distantly related to both the N- and the C-terminal domains the sodium/hydrogen exchanger family domain (IPR006153 from INTERPRO). The domain contains several apparent transmembrane regions and is proposed here to act in transport.
Probab=41.39 E-value=1.4e+02 Score=21.80 Aligned_cols=104 Identities=18% Similarity=0.175 Sum_probs=48.5
Q ss_pred chHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhh-hhhhhhhhc
Q 024637 108 NSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTG-TITVATIYA 186 (265)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~ 186 (265)
.+.++..+++.++.-.|.-+..-+.+. |-+. +..+.++..+..+.......++.-+=.....|...|. ..++.....
T Consensus 56 ~~~GL~lFl~~VGl~aG~~F~~~l~~~-G~~~-~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~G~~aGa~T~tp~L~~A 133 (169)
T PF06826_consen 56 RQLGLALFLAAVGLSAGPGFFSSLKRG-GLKL-LLLGVIITLVPLLIALVIGRYLFKLNPGIAAGILAGALTSTPALAAA 133 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccccCcHHHHHH
Confidence 455666677666666665555544444 5443 3444444444433322211101000011222333333 345666777
Q ss_pred ccc-cCCCcch--hhHHHHHhhhhHHHHHH
Q 024637 187 PEI-YPTPART--TGFGVASSLGKVGGMVC 213 (265)
Q Consensus 187 ~e~-~p~~~r~--~~~g~~~~~~~~g~~~~ 213 (265)
.|. .+.+.-. .+++..+-++.++.++.
T Consensus 134 ~~~~~~~~~~~~~vgYa~~Yp~g~i~~il~ 163 (169)
T PF06826_consen 134 QEAISDSGIPAIAVGYAVTYPFGVIGVILF 163 (169)
T ss_pred HHhhhcCCCchhhhhHHHHHHHHHHHHHHH
Confidence 777 3333333 56666666666555443
No 348
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=41.30 E-value=1.3e+02 Score=21.39 Aligned_cols=21 Identities=10% Similarity=0.240 Sum_probs=16.1
Q ss_pred hhhhHHHHHHHHHHhhhchHH
Q 024637 119 LAELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 119 ~~~~~~~~~~g~l~dr~grr~ 139 (265)
++..+...+.|++.+|..+++
T Consensus 64 ~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 64 LGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred HHHHHHHHHHHHHHHhccccc
Confidence 555677888999999987763
No 349
>PRK04972 putative transporter; Provisional
Probab=40.40 E-value=2.7e+02 Score=24.90 Aligned_cols=42 Identities=21% Similarity=0.160 Sum_probs=22.5
Q ss_pred chHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q 024637 108 NSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIF 151 (265)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~ 151 (265)
.+.++..+++.++.-.|.-+..-+.. -|-+..+ ++.+++.+.
T Consensus 62 ~~~gl~lF~~~vG~~~Gp~F~~~l~~-~g~~~~~-~~~~~~~~~ 103 (558)
T PRK04972 62 LNLGFMLFIFCVGVEAGPNFFSIFFR-DGKNYLM-LALVMVGSA 103 (558)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHH-hhHHHHH-HHHHHHHHH
Confidence 35677777777776666655554433 3544433 333333333
No 350
>COG1288 Predicted membrane protein [Function unknown]
Probab=38.90 E-value=2.6e+02 Score=24.16 Aligned_cols=28 Identities=7% Similarity=0.054 Sum_probs=13.8
Q ss_pred ccccCCCcchhhHHHHHhhhhHHHHHHHH
Q 024637 187 PEIYPTPARTTGFGVASSLGKVGGMVCPL 215 (265)
Q Consensus 187 ~e~~p~~~r~~~~g~~~~~~~~g~~~~~~ 215 (265)
+|.... .|..+.-..+....+-.++.|-
T Consensus 411 aD~vgv-~RqvvV~Afq~g~G~~n~I~PT 438 (481)
T COG1288 411 ADLVGV-PRQVVVLAFQLGDGFSNIIAPT 438 (481)
T ss_pred HHhcCC-CHHHhhhhhhhcchhhheecCc
Confidence 344433 2555555555555555555443
No 351
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=38.64 E-value=50 Score=21.85 Aligned_cols=33 Identities=9% Similarity=-0.224 Sum_probs=21.8
Q ss_pred HhhcchhHHHHHHHHHHHHHHHHHhcCCccccc
Q 024637 221 VTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 253 (265)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 253 (265)
.+..+|..++++...++++.+.+.+.+.|++.-
T Consensus 54 ~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i 86 (105)
T PF10183_consen 54 RDWEGWELPFFFGFSGSLVFGGVFLAYKPDTSI 86 (105)
T ss_pred chHhhhHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence 345567777777666666666666666677764
No 352
>PHA03231 glycoprotein BALF4; Provisional
Probab=37.76 E-value=59 Score=30.23 Aligned_cols=23 Identities=22% Similarity=0.237 Sum_probs=14.9
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHH
Q 024637 199 FGVASSLGKVGGMVCPLVAVGLV 221 (265)
Q Consensus 199 ~g~~~~~~~~g~~~~~~i~~~l~ 221 (265)
-++.+.++.+++++++++.|++.
T Consensus 676 k~vg~vv~~v~ga~~SiVsG~~s 698 (829)
T PHA03231 676 KAVGNVVSGVAGAVGSIVSGVIS 698 (829)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHH
Confidence 34555666677777777777654
No 353
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=37.63 E-value=1.7e+02 Score=21.61 Aligned_cols=22 Identities=9% Similarity=0.247 Sum_probs=14.2
Q ss_pred cCCCcchhhHHHHHhhhhHHHH
Q 024637 190 YPTPARTTGFGVASSLGKVGGM 211 (265)
Q Consensus 190 ~p~~~r~~~~g~~~~~~~~g~~ 211 (265)
-|.+.+.+++++......+-.+
T Consensus 110 ~~~~~~~~gMsIvcv~~Si~ti 131 (189)
T PF05313_consen 110 NPGANNNVGMSIVCVIMSIITI 131 (189)
T ss_pred cCCCcceehhHHHHHHHHHHHH
Confidence 4566777888877666555333
No 354
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=36.24 E-value=76 Score=25.30 Aligned_cols=36 Identities=19% Similarity=0.328 Sum_probs=23.7
Q ss_pred CCCchHHHHHHHHHhhhhHHHHHHH---------HHHhhhchHHH
Q 024637 105 SKDNSLYVDVFIASLAELPGLILSA---------IIVDKIGRKLS 140 (265)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~g---------~l~dr~grr~~ 140 (265)
.++.+....+.+..+...+..++.| +-.||+|||+.
T Consensus 49 lsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 49 LSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred CCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceee
Confidence 5555555666666666667666664 45679999864
No 355
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=35.87 E-value=1.3e+02 Score=21.05 Aligned_cols=24 Identities=17% Similarity=0.180 Sum_probs=18.0
Q ss_pred cccccCCCcchhhHHHHHhhhhHH
Q 024637 186 APEIYPTPARTTGFGVASSLGKVG 209 (265)
Q Consensus 186 ~~e~~p~~~r~~~~g~~~~~~~~g 209 (265)
+.|++|+..|....+......+..
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~ 83 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAV 83 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHH
Confidence 468999999988877776555543
No 356
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=34.89 E-value=13 Score=29.32 Aligned_cols=28 Identities=4% Similarity=-0.007 Sum_probs=0.0
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 225 HLRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 225 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
.|+....=.-.+.+..++++|++..+++
T Consensus 162 aWfT~L~dL~WL~LFlaiLIWlY~H~~~ 189 (381)
T PF05297_consen 162 AWFTILVDLYWLLLFLAILIWLYVHDQR 189 (381)
T ss_dssp ----------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3443333333333444455555554544
No 357
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=34.48 E-value=1.9e+02 Score=22.37 Aligned_cols=56 Identities=21% Similarity=0.214 Sum_probs=28.8
Q ss_pred hhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 024637 119 LAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCV 175 (265)
Q Consensus 119 ~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 175 (265)
+++.+|..+..++.||+.+......+.....++.-...-.++.. .++...+.|...
T Consensus 13 ~G~~iG~~~~~~i~~~~~~~l~~~~Gl~~l~iGi~~~~~~~~~~-~vi~slvlG~ii 68 (226)
T PF04474_consen 13 LGGLIGLLLGRRIPERIKDTLMQALGLCVLAIGISMALKGQNPL-LVILSLVLGTII 68 (226)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHhhHHHHHHHHHHHHccCccH-HHHHHHHHHHHH
Confidence 45555666666666666655555555555555554444344433 333344444333
No 358
>TIGR03732 lanti_perm_MutE lantibiotic protection ABC transporter permease subunit, MutE/EpiE family. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family is largely restricted to gallidermin-family lantibiotic cassettes, but also include orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes. In most species, this subunit is paralogous to an adjacent gene, modeled separately.
Probab=34.08 E-value=2.2e+02 Score=22.02 Aligned_cols=33 Identities=27% Similarity=0.370 Sum_probs=20.6
Q ss_pred hhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q 024637 119 LAELPGLILSAIIVDKIGRKLSMVLMFVSACIF 151 (265)
Q Consensus 119 ~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~ 151 (265)
++.+.-.++--+++.|+|.-..+.++.+...+.
T Consensus 134 i~sl~~i~l~l~ls~~~g~~~si~ig~~~~li~ 166 (241)
T TIGR03732 134 LTSLWQIPLCLFLARKFGMFVSILVNLVLGLIF 166 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444556667888887776666666544433
No 359
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=33.62 E-value=1.7e+02 Score=24.33 Aligned_cols=47 Identities=15% Similarity=0.099 Sum_probs=36.9
Q ss_pred chHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 024637 108 NSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLP 154 (265)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 154 (265)
..++..+..++++..+.+.+.|.+..++||-.....+.+.-..-...
T Consensus 310 ~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~l~li~~ 356 (390)
T KOG3097|consen 310 SRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVHLLLITI 356 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHH
Confidence 55677778888888889999999999999998887777665554433
No 360
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=33.43 E-value=1.4e+02 Score=22.92 Aligned_cols=24 Identities=13% Similarity=0.077 Sum_probs=13.1
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhc
Q 024637 113 DVFIASLAELPGLILSAIIVDKIG 136 (265)
Q Consensus 113 ~~~~~~~~~~~~~~~~g~l~dr~g 136 (265)
..+...++.++..++.++.++|-.
T Consensus 56 ~i~gi~~g~l~am~vl~rra~ra~ 79 (224)
T PF13829_consen 56 LIIGILLGLLAAMIVLSRRAQRAA 79 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334555556666676666643
No 361
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=33.31 E-value=1.5e+02 Score=19.90 Aligned_cols=30 Identities=0% Similarity=0.051 Sum_probs=16.8
Q ss_pred hhhhHHHHHHHHHHhhhchHHHHHHHHHHH
Q 024637 119 LAELPGLILSAIIVDKIGRKLSMVLMFVSA 148 (265)
Q Consensus 119 ~~~~~~~~~~g~l~dr~grr~~~~~~~~~~ 148 (265)
+...++.+++|+.+-|..++|=++.+....
T Consensus 45 ~i~~ls~~~GG~~a~~~~~~kG~l~G~~~G 74 (116)
T PF12670_consen 45 IIYILSVFIGGFYAGRKAGSKGWLHGLLVG 74 (116)
T ss_pred HHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 455667777777776654444444444433
No 362
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=32.77 E-value=76 Score=20.56 Aligned_cols=20 Identities=15% Similarity=0.225 Sum_probs=13.5
Q ss_pred hhhhHHHHHHHHHHhhhchH
Q 024637 119 LAELPGLILSAIIVDKIGRK 138 (265)
Q Consensus 119 ~~~~~~~~~~g~l~dr~grr 138 (265)
+..++.+++.|.+.||..||
T Consensus 86 ~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 86 AVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHhhC
Confidence 44456788899999998876
No 363
>PF03605 DcuA_DcuB: Anaerobic c4-dicarboxylate membrane transporter; InterPro: IPR004668 These proteins are members of the C4-Dicarboxylate Uptake (Dcu) family. Most proteins in this family are predicted to have 12 GES predicted transmembrane regions; however the one member whose membrane topology has been experimentally determined has 10 transmembrane regions, with both the N- and C-termini localized to the periplasm []. The DcuA and DcuB proteins are involved in the transport of aspartate, malate, fumarate and succinate in many species [, , ], and are thought to function as antiporters with any two of these substrates. Since DcuA is encoded in an operon with the gene for aspartase, and DcuB is encoded in an operon with the gene for fumarase, their physiological functions may be to catalyze aspartate:fumarate and fumarate:malate exchange during the anaerobic utilization of aspartate and fumarate, respectively []. The Escherichia coli DcuA and DcuB proteins have very different expression patterns []. DcuA is constitutively expressed; DcuB is strongly induced anaerobically by FNR and C4-dicarboxylates, while it is repressed by nitrate and subject to CRP-mediated catabolite repression.; GO: 0015556 C4-dicarboxylate transmembrane transporter activity, 0015740 C4-dicarboxylate transport, 0016021 integral to membrane
Probab=32.04 E-value=3e+02 Score=22.98 Aligned_cols=11 Identities=9% Similarity=-0.118 Sum_probs=4.6
Q ss_pred ccchhhhhhHH
Q 024637 30 RDTHMLSITRK 40 (265)
Q Consensus 30 ~~~~~~~~~~~ 40 (265)
+++|+.+++.+
T Consensus 192 ~~Dp~yq~rl~ 202 (364)
T PF03605_consen 192 DDDPEYQERLA 202 (364)
T ss_pred ccCHHHHHHHh
Confidence 34444444433
No 364
>PRK14228 camphor resistance protein CrcB; Provisional
Probab=31.86 E-value=1.7e+02 Score=19.99 Aligned_cols=18 Identities=17% Similarity=0.181 Sum_probs=9.3
Q ss_pred HHhhhhhhhhhhcccccC
Q 024637 174 CVTGTITVATIYAPEIYP 191 (265)
Q Consensus 174 ~~~~~~~~~~~~~~e~~p 191 (265)
|..+.++...++..|.+.
T Consensus 70 Gf~GgfTTFSTf~~e~~~ 87 (122)
T PRK14228 70 AFVGAYTTFSTWMLETQR 87 (122)
T ss_pred HHhcchhhHHHHHHHHHH
Confidence 333444555666666543
No 365
>PRK14199 camphor resistance protein CrcB; Provisional
Probab=31.86 E-value=1.7e+02 Score=20.13 Aligned_cols=35 Identities=11% Similarity=0.159 Sum_probs=17.4
Q ss_pred HHhhhhhhhhhhcccccCCC-cchhhHHHHHhhhhH
Q 024637 174 CVTGTITVATIYAPEIYPTP-ARTTGFGVASSLGKV 208 (265)
Q Consensus 174 ~~~~~~~~~~~~~~e~~p~~-~r~~~~g~~~~~~~~ 208 (265)
|..+.++...++..|...-- .+....++.+...++
T Consensus 75 Gf~GgfTTFSTf~~E~~~l~~~~~~~~a~~y~~~s~ 110 (128)
T PRK14199 75 GIMGGLTTFSTFSYETINLITNGNILLGIENIILNL 110 (128)
T ss_pred HHhcccccHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 33444566666666665322 233344555555443
No 366
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=31.84 E-value=76 Score=15.95 Aligned_cols=19 Identities=5% Similarity=0.172 Sum_probs=12.5
Q ss_pred HHHhhhhHHHHHHHHHHhh
Q 024637 116 IASLAELPGLILSAIIVDK 134 (265)
Q Consensus 116 ~~~~~~~~~~~~~g~l~dr 134 (265)
...+++++.+++.+|+-+|
T Consensus 16 AP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 16 APIIAGIIASLIVGWLRNR 34 (35)
T ss_pred hHHHHHHHHHHHHHHHHhc
Confidence 3345667777777877654
No 367
>PRK14232 camphor resistance protein CrcB; Provisional
Probab=31.79 E-value=1.7e+02 Score=19.93 Aligned_cols=19 Identities=16% Similarity=0.107 Sum_probs=10.3
Q ss_pred HHHhhhhhhhhhhcccccC
Q 024637 173 MCVTGTITVATIYAPEIYP 191 (265)
Q Consensus 173 ~~~~~~~~~~~~~~~e~~p 191 (265)
.|..+.++...++..|.+.
T Consensus 65 tGf~GgfTTFSTf~~e~~~ 83 (120)
T PRK14232 65 DGFLGAYTTFSTFMYEGFN 83 (120)
T ss_pred HHhcccchhHHHHHHHHHH
Confidence 3444445666666666543
No 368
>PRK04972 putative transporter; Provisional
Probab=31.62 E-value=3.8e+02 Score=24.01 Aligned_cols=35 Identities=11% Similarity=0.014 Sum_probs=25.5
Q ss_pred hhhhhhhhhcccccCCCcchhhHHHHHhhhhHHHH
Q 024637 177 GTITVATIYAPEIYPTPARTTGFGVASSLGKVGGM 211 (265)
Q Consensus 177 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~ 211 (265)
...++...+..|..+.+.-..+++..+...++.-.
T Consensus 513 ~t~~~~l~~~~~~~~~~~~~~gYa~~yp~~~il~~ 547 (558)
T PRK04972 513 RTCAPAMEIISDTARSNIPALGYAGTYAIANVLLT 547 (558)
T ss_pred CCCcHHHHHHHhhcCCCCcccccHhHHHHHHHHHH
Confidence 34577788888888777777778888877775433
No 369
>PRK10692 hypothetical protein; Provisional
Probab=31.47 E-value=1.4e+02 Score=18.93 Aligned_cols=18 Identities=28% Similarity=0.076 Sum_probs=10.4
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 024637 137 RKLSMVLMFVSACIFLLP 154 (265)
Q Consensus 137 rr~~~~~~~~~~~~~~~~ 154 (265)
||...+++-++++++++.
T Consensus 3 Rk~a~~~GN~lMglGmv~ 20 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVV 20 (92)
T ss_pred chhhHHHhhHHHHHHHHH
Confidence 555566666666655543
No 370
>PRK14214 camphor resistance protein CrcB; Provisional
Probab=30.47 E-value=1.8e+02 Score=19.76 Aligned_cols=19 Identities=16% Similarity=0.121 Sum_probs=9.8
Q ss_pred HHHhhhhhhhhhhcccccC
Q 024637 173 MCVTGTITVATIYAPEIYP 191 (265)
Q Consensus 173 ~~~~~~~~~~~~~~~e~~p 191 (265)
.|..+.++...++..|...
T Consensus 67 tGf~GgfTTFSTf~~e~~~ 85 (118)
T PRK14214 67 TGFMGGYTTFSTFKVESME 85 (118)
T ss_pred HHHcccchhHHHHHHHHHH
Confidence 3344444556666666543
No 371
>COG4920 Predicted membrane protein [Function unknown]
Probab=30.11 E-value=2.5e+02 Score=21.30 Aligned_cols=45 Identities=7% Similarity=-0.020 Sum_probs=22.4
Q ss_pred hhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhh
Q 024637 134 KIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGT 178 (265)
Q Consensus 134 r~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 178 (265)
-+.+|++++--..+...+.++..+..++..+++..+++.+|.+..
T Consensus 4 pfn~~rvL~sq~~iilfSlvlsffp~~f~tf~ilyilf~~glsiV 48 (249)
T COG4920 4 PFNMRRVLISQLSIILFSLVLSFFPAEFFTFLILYILFFFGLSIV 48 (249)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 345666655444444444444444555544555555554444433
No 372
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=29.90 E-value=1.3e+02 Score=22.26 Aligned_cols=28 Identities=21% Similarity=0.288 Sum_probs=18.7
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHH
Q 024637 112 VDVFIASLAELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 112 ~~~~~~~~~~~~~~~~~g~l~dr~grr~ 139 (265)
+...+..+..++++++++++..|+-||.
T Consensus 156 ~~~~~~~~~~~v~a~lG~~lG~kllkKH 183 (186)
T PF09605_consen 156 WMLIIIIIITFVGALLGALLGKKLLKKH 183 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444445666778888888888776664
No 373
>PRK03818 putative transporter; Validated
Probab=29.24 E-value=4.2e+02 Score=23.72 Aligned_cols=23 Identities=9% Similarity=0.085 Sum_probs=11.7
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHH
Q 024637 109 SLYVDVFIASLAELPGLILSAII 131 (265)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~g~l 131 (265)
+.++..+++.++.-.|.-+..-+
T Consensus 64 ~~gl~lFv~~vGl~~Gp~f~~~l 86 (552)
T PRK03818 64 EFGLILFVYTIGIQVGPGFFSSL 86 (552)
T ss_pred HHHHHHHHHHHhhcccHHHHHHH
Confidence 34555556555555554444433
No 374
>COG2966 Uncharacterized conserved protein [Function unknown]
Probab=28.68 E-value=2.9e+02 Score=21.70 Aligned_cols=23 Identities=22% Similarity=0.338 Sum_probs=11.6
Q ss_pred hhhhHHHHHHHHHHhhhchHHHHH
Q 024637 119 LAELPGLILSAIIVDKIGRKLSMV 142 (265)
Q Consensus 119 ~~~~~~~~~~g~l~dr~grr~~~~ 142 (265)
+.+.++..+.-++. |.++...+.
T Consensus 155 ~~~~~~~~~~~~l~-r~~~~~~~~ 177 (250)
T COG2966 155 FAGLLGFLLRQYLS-RKGNPDFFF 177 (250)
T ss_pred HHHHHHHHHHHHHH-HhhchhhHH
Confidence 33444444444555 666655443
No 375
>PF11283 DUF3084: Protein of unknown function (DUF3084); InterPro: IPR021435 This bacterial family of proteins has no known function.
Probab=28.56 E-value=1.3e+02 Score=18.79 Aligned_cols=17 Identities=29% Similarity=0.278 Sum_probs=9.3
Q ss_pred HHHHHHHHhhhchHHHH
Q 024637 125 LILSAIIVDKIGRKLSM 141 (265)
Q Consensus 125 ~~~~g~l~dr~grr~~~ 141 (265)
+.++-.+..|.|+|++-
T Consensus 17 A~~GD~iG~kvGKkrls 33 (79)
T PF11283_consen 17 AYLGDRIGSKVGKKRLS 33 (79)
T ss_pred HHHHHHHHHHHhHHHhh
Confidence 34444555556777654
No 376
>PF13491 DUF4117: Domain of unknown function (DUF4117)
Probab=28.28 E-value=2.3e+02 Score=20.33 Aligned_cols=35 Identities=26% Similarity=0.300 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 024637 208 VGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIA 242 (265)
Q Consensus 208 ~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~ 242 (265)
.|+.+|..+...+.+..|......+...+.++..+
T Consensus 122 ~GG~iG~~l~~~l~~~lG~~Ga~iil~~~~~~~l~ 156 (171)
T PF13491_consen 122 GGGIIGYLLASLLVKLLGKVGALIILLVLLLIGLL 156 (171)
T ss_pred CCCHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 46666766766666666766555555555444443
No 377
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=28.19 E-value=2e+02 Score=21.12 Aligned_cols=8 Identities=13% Similarity=0.293 Sum_probs=3.9
Q ss_pred cccccccc
Q 024637 50 SSFFMLFS 57 (265)
Q Consensus 50 ~~~~~l~~ 57 (265)
-+|.+.|+
T Consensus 25 L~W~~ffk 32 (173)
T PF08566_consen 25 LTWNEFFK 32 (173)
T ss_pred CCHHHHHH
Confidence 34555553
No 378
>COG3162 Predicted membrane protein [Function unknown]
Probab=28.10 E-value=1.8e+02 Score=19.06 Aligned_cols=38 Identities=18% Similarity=0.219 Sum_probs=18.8
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 024637 51 SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLS 89 (265)
Q Consensus 51 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (265)
.++++.+ +.++..+.+.+.++...+.+-.+..|-|..+
T Consensus 14 ~f~eLv~-kr~~Fa~~ltl~flv~Y~~filLiaf~~~~l 51 (102)
T COG3162 14 RFRELVR-KRRRFAVPLTLIFLVVYFGFILLIAFAPGWL 51 (102)
T ss_pred hHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHh
Confidence 4556553 2333344444445555555555555555554
No 379
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=27.30 E-value=1.9e+02 Score=19.20 Aligned_cols=19 Identities=16% Similarity=0.163 Sum_probs=10.5
Q ss_pred HHHhhhhhhhhhhcccccC
Q 024637 173 MCVTGTITVATIYAPEIYP 191 (265)
Q Consensus 173 ~~~~~~~~~~~~~~~e~~p 191 (265)
.|..+.++...++..|...
T Consensus 61 tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 61 TGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred hhHccccccHHHHHHHHHH
Confidence 3444445666666666553
No 380
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=26.79 E-value=3.8e+02 Score=22.40 Aligned_cols=106 Identities=9% Similarity=0.061 Sum_probs=57.8
Q ss_pred HhhhhHHHHHHHHHHhhhc--hHHHHHHHHHHHHHHHHHHhh--cch---------hH------HHHHH----HHHHHHH
Q 024637 118 SLAELPGLILSAIIVDKIG--RKLSMVLMFVSACIFLLPLVF--HQS---------AV------VTTLL----LFGVRMC 174 (265)
Q Consensus 118 ~~~~~~~~~~~g~l~dr~g--rr~~~~~~~~~~~~~~~~~~~--~~~---------~~------~~~~~----~~~~g~~ 174 (265)
++..+.+.+++-+++|..| ++..+..+..+..++.+++.. ..| .. ...+. ..+.|+.
T Consensus 173 ~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~ 252 (354)
T PF05631_consen 173 GVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAILSDPRILLLGLI 252 (354)
T ss_pred HHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHHHcCchhHHHHHH
Confidence 3445556666667777764 566777777777766665543 111 00 00111 1233333
Q ss_pred HhhhhhhhhhhcccccCC---CcchhhHHHHHhhhhHHHHHHHHHHHHHHhh
Q 024637 175 VTGTITVATIYAPEIYPT---PARTTGFGVASSLGKVGGMVCPLVAVGLVTS 223 (265)
Q Consensus 175 ~~~~~~~~~~~~~e~~p~---~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~ 223 (265)
....-+.++..+-.+.|. +.+..=.|+.........++|+.+...+...
T Consensus 253 qslFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 253 QSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred HHHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344445555555555553 2244556777766667777788777666543
No 381
>KOG4782 consensus Predicted membrane protein [Function unknown]
Probab=26.76 E-value=93 Score=19.89 Aligned_cols=11 Identities=9% Similarity=0.211 Sum_probs=5.2
Q ss_pred cccccccccch
Q 024637 49 FSSFFMLFSRK 59 (265)
Q Consensus 49 ~~~~~~l~~~~ 59 (265)
+...+..+.++
T Consensus 46 ~ekV~~~~akn 56 (108)
T KOG4782|consen 46 QEKVKEIFAKN 56 (108)
T ss_pred HHHHHHHHHhh
Confidence 34455555433
No 382
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=26.39 E-value=2e+02 Score=19.13 Aligned_cols=30 Identities=17% Similarity=0.103 Sum_probs=17.3
Q ss_pred HHHHHhhhchHHHHHHHHHHHHHHHHHHhh
Q 024637 128 SAIIVDKIGRKLSMVLMFVSACIFLLPLVF 157 (265)
Q Consensus 128 ~g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 157 (265)
.-..+|.+.|+.......+..+++..++..
T Consensus 20 ~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~ 49 (106)
T COG2076 20 LLKYSDGFTRLWPSILTIVGYGLSFYLLSL 49 (106)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHH
Confidence 445677777776665555555555444433
No 383
>PRK10255 PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional
Probab=26.22 E-value=3e+02 Score=25.16 Aligned_cols=39 Identities=8% Similarity=0.114 Sum_probs=26.8
Q ss_pred hhhhHHHHHHHHHHhhh-------------chHHHHHHHHHHHHHHHHHHhh
Q 024637 119 LAELPGLILSAIIVDKI-------------GRKLSMVLMFVSACIFLLPLVF 157 (265)
Q Consensus 119 ~~~~~~~~~~g~l~dr~-------------grr~~~~~~~~~~~~~~~~~~~ 157 (265)
+++++..++.+++-+|+ |+|.+.+++.+.+.+..+++.+
T Consensus 99 fgGIi~G~i~a~l~nkf~~~klP~~l~fF~G~rfVpii~~~~~~~~g~i~~~ 150 (648)
T PRK10255 99 LAGIITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGY 150 (648)
T ss_pred hhhhHHHHHHHHHHHHhccccCCceeeecCCcchhHhHHHHHHHHHHHHHHH
Confidence 55667777888888886 6777777766666655554444
No 384
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.12 E-value=1.1e+02 Score=25.25 Aligned_cols=7 Identities=29% Similarity=0.828 Sum_probs=3.9
Q ss_pred ccCCCcc
Q 024637 189 IYPTPAR 195 (265)
Q Consensus 189 ~~p~~~r 195 (265)
++|...|
T Consensus 209 LWP~~mR 215 (372)
T KOG2927|consen 209 LWPRRMR 215 (372)
T ss_pred cCcHHHh
Confidence 4566555
No 385
>PF11712 Vma12: Endoplasmic reticulum-based factor for assembly of V-ATPase; InterPro: IPR021013 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. The yeast vacuolar proton-translocating ATPase (V-ATPase) is the best characterised member of the V-ATPase family. A total of thirteen genes are required for encoding the subunits of the enzyme complex itself and an additional three for providing factors necessary for the assembly of the whole. Vma12 is one of these latter, all three of which are localised to the endoplasmic reticulum [].
Probab=25.72 E-value=2.4e+02 Score=19.75 Aligned_cols=22 Identities=5% Similarity=0.110 Sum_probs=12.6
Q ss_pred HHHHHHHhhhhHHHHHHHH-HHh
Q 024637 112 VDVFIASLAELPGLILSAI-IVD 133 (265)
Q Consensus 112 ~~~~~~~~~~~~~~~~~g~-l~d 133 (265)
+...+..+..+++..++|| .++
T Consensus 79 ls~v~Nilvsv~~~~~~~~~~~~ 101 (142)
T PF11712_consen 79 LSTVFNILVSVFAVFFAGWYWAG 101 (142)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444566667777777 444
No 386
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=25.39 E-value=2.2e+02 Score=19.16 Aligned_cols=7 Identities=29% Similarity=0.358 Sum_probs=2.7
Q ss_pred hhchHHH
Q 024637 134 KIGRKLS 140 (265)
Q Consensus 134 r~grr~~ 140 (265)
|+.|-+.
T Consensus 7 KiN~~R~ 13 (114)
T PF11023_consen 7 KINKIRT 13 (114)
T ss_pred HHHHHHH
Confidence 3443333
No 387
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=25.26 E-value=3e+02 Score=21.72 Aligned_cols=23 Identities=13% Similarity=0.117 Sum_probs=13.2
Q ss_pred CCcchhhHHHHHhhhhHHHHHHH
Q 024637 192 TPARTTGFGVASSLGKVGGMVCP 214 (265)
Q Consensus 192 ~~~r~~~~g~~~~~~~~g~~~~~ 214 (265)
+-.|..++|+....++..+.+..
T Consensus 74 pii~~iGLglg~liW~s~n~l~G 96 (254)
T PF07857_consen 74 PIIKTIGLGLGMLIWGSVNCLTG 96 (254)
T ss_pred hHhhhhhhHHHHHHHHHHHHHHH
Confidence 34566677777666665444433
No 388
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=25.12 E-value=1.9e+02 Score=18.28 Aligned_cols=18 Identities=22% Similarity=0.110 Sum_probs=10.0
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 024637 137 RKLSMVLMFVSACIFLLP 154 (265)
Q Consensus 137 rr~~~~~~~~~~~~~~~~ 154 (265)
||....++-.+++++++.
T Consensus 3 Rk~a~~~GN~lMglGmv~ 20 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMVV 20 (89)
T ss_pred chhhHHHhhHHHHHhHHH
Confidence 555555565555555543
No 389
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=24.91 E-value=2.3e+02 Score=19.26 Aligned_cols=17 Identities=18% Similarity=0.233 Sum_probs=8.2
Q ss_pred HHhhhhhhhhhhccccc
Q 024637 174 CVTGTITVATIYAPEIY 190 (265)
Q Consensus 174 ~~~~~~~~~~~~~~e~~ 190 (265)
|..+.++...++..|.+
T Consensus 66 GflGgfTTFSTf~~e~~ 82 (119)
T PRK14230 66 GFLGSLTTLSGFSLETV 82 (119)
T ss_pred HHhchHhhHHHHHHHHH
Confidence 33334455555555554
No 390
>TIGR02005 PTS-IIBC-alpha PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose.
Probab=24.82 E-value=3.6e+02 Score=23.95 Aligned_cols=39 Identities=8% Similarity=0.076 Sum_probs=26.2
Q ss_pred hhhhHHHHHHHHHHhhh-------------chHHHHHHHHHHHHHHHHHHhh
Q 024637 119 LAELPGLILSAIIVDKI-------------GRKLSMVLMFVSACIFLLPLVF 157 (265)
Q Consensus 119 ~~~~~~~~~~g~l~dr~-------------grr~~~~~~~~~~~~~~~~~~~ 157 (265)
+++++..++.+++-+|+ |+|-+.+++.+.+.+..+.+.+
T Consensus 140 fgGIi~G~i~a~l~Nkf~~ikLP~~L~FF~G~RfVpIi~~~~~~~l~~~~~~ 191 (524)
T TIGR02005 140 IGAIIISGIITYIHNRFFDKRLPVFLGIFQGTTFVVTIAFFVMLPCAAITCL 191 (524)
T ss_pred HHHHHHHHHHHHHHHHHhccccchhhhhcCCCcchHhHHHHHHHHHHHHHHH
Confidence 56677788888888885 6777766666655555444443
No 391
>KOG4473 consensus Uncharacterized membrane protein [Function unknown]
Probab=24.57 E-value=2.7e+02 Score=21.35 Aligned_cols=34 Identities=26% Similarity=0.351 Sum_probs=15.3
Q ss_pred CCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhc
Q 024637 191 PTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSC 224 (265)
Q Consensus 191 p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~ 224 (265)
|.+.|.+-.++.......-+.+.|++...+....
T Consensus 158 p~~~~p~qaA~asa~afslGg~vPLl~~~fi~~~ 191 (247)
T KOG4473|consen 158 PAENRPLQAAAASALAFSLGGIVPLLPAAFVKDY 191 (247)
T ss_pred CCCCchHHHHHHHHHHHHhccHHhhhHHHhhhhh
Confidence 3444444444444444433344555555444443
No 392
>COG4708 Predicted membrane protein [Function unknown]
Probab=23.94 E-value=1.3e+02 Score=21.17 Aligned_cols=24 Identities=33% Similarity=0.717 Sum_probs=18.6
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHH
Q 024637 116 IASLAELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 116 ~~~~~~~~~~~~~g~l~dr~grr~ 139 (265)
..+++.++...+++.+.|+.|+|.
T Consensus 142 tta~gEfvsl~vg~~~m~kl~kr~ 165 (169)
T COG4708 142 TTALGEFVSLYVGALIMDKLGKRI 165 (169)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhhh
Confidence 345777888888888888888874
No 393
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=23.61 E-value=4.9e+02 Score=22.63 Aligned_cols=148 Identities=11% Similarity=0.068 Sum_probs=0.0
Q ss_pred CchHHHHHHHHHhhhhHHH--------HHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhhh
Q 024637 107 DNSLYVDVFIASLAELPGL--------ILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTLLLFGVRMCVTGT 178 (265)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~--------~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 178 (265)
....+....+..+++..+- -....+..|+++|+...+-.+............-+...+.....+..+.....
T Consensus 75 ~~~a~ii~~I~~igG~~~vm~~tGA~~~~v~~l~k~l~~~~~~~I~i~~~~f~~~~~~~g~~~~~i~~~~il~pi~~alG 154 (465)
T PF03606_consen 75 SQAAGIIFFIMIIGGFFGVMNHTGAIDALVNLLIKPLKGKKNPLIPILMFFFSGGGLTIGIPEEAIAFMPILIPILIALG 154 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcC
Q ss_pred hhhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcc------hhHHHHHHHHHHHHHHHHHhcCCcccc
Q 024637 179 ITVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH------LRLAVILFEVVFVLAIASSLLFPFETM 252 (265)
Q Consensus 179 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~ 252 (265)
+++..-.-+.-.....+..+....|+-.+.-.+..| ...-...+.+...+......++.++-+
T Consensus 155 -----------~d~~~a~a~v~~~~~~g~~~~~~npf~~~iAq~iaglp~~sg~~~r~i~~~i~~~i~~~~~~~ya~kv~ 223 (465)
T PF03606_consen 155 -----------YDPITAAAAVILGAGAGFAGPPSNPFTVGIAQKIAGLPLFSGFWFRQIPFVIFTLIAIAYVHRYAQKVK 223 (465)
T ss_pred -----------CCHHHHHHHHHHHHHHhhcCCccChHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred ccchhhhhhhccC
Q 024637 253 GRELKDTVDAIES 265 (265)
Q Consensus 253 ~~~~~~~~~~~~~ 265 (265)
+++..+..++.++
T Consensus 224 ~~p~~~~~~~~~~ 236 (465)
T PF03606_consen 224 KDPSYSEVYEDDE 236 (465)
T ss_pred hcccchhhhhhHH
No 394
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=22.72 E-value=2.1e+02 Score=18.11 Aligned_cols=37 Identities=8% Similarity=-0.045 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhhhch-------HHHHHHHHHHHHHHHHHHhhcc
Q 024637 123 PGLILSAIIVDKIGR-------KLSMVLMFVSACIFLLPLVFHQ 159 (265)
Q Consensus 123 ~~~~~~g~l~dr~gr-------r~~~~~~~~~~~~~~~~~~~~~ 159 (265)
.+++..+++.+|..+ ++.+..+.++...+.+++++..
T Consensus 33 a~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqr 76 (86)
T PF10785_consen 33 AASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQR 76 (86)
T ss_pred HHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 455666677776543 5667777777777766666533
No 395
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=22.64 E-value=3.3e+02 Score=20.20 Aligned_cols=43 Identities=16% Similarity=0.313 Sum_probs=32.8
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHh
Q 024637 114 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV 156 (265)
Q Consensus 114 ~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 156 (265)
.....+..++++++.-.+..|.+||..+.+..++.++..+++.
T Consensus 34 ~~~~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G 76 (186)
T PF09605_consen 34 LFMPAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLMG 76 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHh
Confidence 3344566677888888899999999999888888777765543
No 396
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=22.52 E-value=7.9e+02 Score=24.64 Aligned_cols=38 Identities=11% Similarity=0.261 Sum_probs=22.5
Q ss_pred HhhhhHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 024637 203 SSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIAS 243 (265)
Q Consensus 203 ~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~~~~i~~~~ 243 (265)
..+.++..++..++.++.. +|+.++...+...++....
T Consensus 788 ~vv~~~~~~~~~iiiaf~~---~W~lalv~la~~Pll~~~~ 825 (1228)
T KOG0055|consen 788 LVVQNIAAVIIGIIIAFIY---GWRLALVVLATFPLLILSG 825 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555443 7888777777666655443
No 397
>cd02437 CCC1_like_1 CCC1-related protein family. CCC1_like_1: This is a protein family closely related to CCC1, a family of proteins involved in iron and manganese transport. Yeast CCC1 is a vacuole transmembrane protein responsible for the iron and manganese accumulation in vacuole.
Probab=22.48 E-value=3.2e+02 Score=19.98 Aligned_cols=19 Identities=21% Similarity=0.324 Sum_probs=10.5
Q ss_pred hhHHHHHHHHHHhhhchHH
Q 024637 121 ELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 121 ~~~~~~~~g~l~dr~grr~ 139 (265)
..+.-.+.|.+.-|+.+++
T Consensus 131 ~~~~L~~~G~~~~~~~~~~ 149 (175)
T cd02437 131 VLAILFILGLVIGKISKIN 149 (175)
T ss_pred HHHHHHHHHHHHHHHcCCC
Confidence 3344455666666665444
No 398
>COG1811 Uncharacterized membrane protein, possible Na+ channel or pump [General function prediction only]
Probab=21.84 E-value=3.7e+02 Score=20.60 Aligned_cols=46 Identities=13% Similarity=0.171 Sum_probs=24.5
Q ss_pred hhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHhhcchhHHH
Q 024637 119 LAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVT 164 (265)
Q Consensus 119 ~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (265)
+++++|..+..++.||+.+--+-..+.....++.-...-..+....
T Consensus 14 ~G~iiG~l~~~klper~k~~l~~~~Gl~~l~iGI~m~~~~~n~~~~ 59 (228)
T COG1811 14 IGGIIGLLIGKKLPERIKDILMQCLGLAILGIGIKMALQAKNDIMI 59 (228)
T ss_pred HHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHH
Confidence 3445555555556666655555555555555555444445554433
No 399
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=21.58 E-value=2.1e+02 Score=17.56 Aligned_cols=28 Identities=11% Similarity=0.040 Sum_probs=19.1
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHHhhcc
Q 024637 132 VDKIGRKLSMVLMFVSACIFLLPLVFHQ 159 (265)
Q Consensus 132 ~dr~grr~~~~~~~~~~~~~~~~~~~~~ 159 (265)
-|.-.|++.+.+.+.+-..++++.....
T Consensus 11 ~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~ 38 (73)
T PF11298_consen 11 QDQRRRRRRYLIMMGIRIPCFVLAAVVY 38 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566677778777777777776665543
No 400
>COG2056 Predicted permease [General function prediction only]
Probab=21.37 E-value=2.8e+02 Score=23.23 Aligned_cols=20 Identities=5% Similarity=0.157 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHhcC
Q 024637 228 LAVILFEVVFVLAIASSLLF 247 (265)
Q Consensus 228 ~~~~~~~~~~~i~~~~~~~~ 247 (265)
.++++.+...+++.++..+.
T Consensus 192 ~am~ip~lgMi~GLl~ai~~ 211 (444)
T COG2056 192 KAMWIPGLGMIVGLLLAIFV 211 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555554444
No 401
>PRK14205 camphor resistance protein CrcB; Provisional
Probab=21.22 E-value=2.8e+02 Score=18.83 Aligned_cols=19 Identities=16% Similarity=0.162 Sum_probs=10.5
Q ss_pred HHHhhhhhhhhhhcccccC
Q 024637 173 MCVTGTITVATIYAPEIYP 191 (265)
Q Consensus 173 ~~~~~~~~~~~~~~~e~~p 191 (265)
.|..+.++...++..|.+.
T Consensus 66 tGf~GgfTTFSTf~~e~~~ 84 (118)
T PRK14205 66 TGFMGAFTTFSTFKLESVQ 84 (118)
T ss_pred hhhccccccHHHHHHHHHH
Confidence 3444445666666666554
No 402
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=20.75 E-value=2.1e+02 Score=17.20 Aligned_cols=29 Identities=14% Similarity=-0.089 Sum_probs=11.9
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCccccc
Q 024637 225 HLRLAVILFEVVFVLAIASSLLFPFETMG 253 (265)
Q Consensus 225 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 253 (265)
|+...+++...+.+++.-++-.+.||..+
T Consensus 29 g~Aav~~~~~~~~l~~~~~iG~~LPe~s~ 57 (67)
T PF11511_consen 29 GYAAVFFLGLWFLLVALYFIGLLLPERSR 57 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSTTTCS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCchhcc
Confidence 33333433333333333333344456543
No 403
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=20.72 E-value=4.9e+02 Score=21.53 Aligned_cols=15 Identities=0% Similarity=-0.009 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHHhcC
Q 024637 233 FEVVFVLAIASSLLF 247 (265)
Q Consensus 233 ~~~~~~i~~~~~~~~ 247 (265)
.+.+.++..++.+..
T Consensus 291 ~af~lIiiG~vvy~~ 305 (334)
T PF06027_consen 291 LAFALIIIGFVVYNL 305 (334)
T ss_pred HHHHHHHHHhheEEc
Confidence 333333333333433
No 404
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=20.57 E-value=1.9e+02 Score=20.44 Aligned_cols=23 Identities=17% Similarity=0.144 Sum_probs=16.8
Q ss_pred cccccCCCcchhhHHHHHhhhhH
Q 024637 186 APEIYPTPARTTGFGVASSLGKV 208 (265)
Q Consensus 186 ~~e~~p~~~r~~~~g~~~~~~~~ 208 (265)
+.|++|+..|...........+.
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s~ 80 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTNF 80 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHH
Confidence 46899999998877766555443
No 405
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=20.52 E-value=3.8e+02 Score=20.19 Aligned_cols=63 Identities=10% Similarity=0.029 Sum_probs=27.9
Q ss_pred hhhhhhcccccCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhhcchhHH-HHHHHHHHHHHHHH
Q 024637 180 TVATIYAPEIYPTPARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLA-VILFEVVFVLAIAS 243 (265)
Q Consensus 180 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~i~~~l~~~~~~~~~-~~~~~~~~~i~~~~ 243 (265)
+....+..+. ++++|-+..--......+-..+..+.+.++.+.+|.... +-+.+.+.+....+
T Consensus 22 p~f~~lt~~~-~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL~~ia~ 85 (203)
T PF01914_consen 22 PIFLSLTKGM-SPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIILFLIAL 85 (203)
T ss_pred HHHHHHhCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 3344444444 444443333333333333344445555566666665443 44444444433333
No 406
>KOG1484 consensus Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=20.14 E-value=5.1e+02 Score=21.48 Aligned_cols=22 Identities=18% Similarity=0.134 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHhhcchhHH
Q 024637 208 VGGMVCPLVAVGLVTSCHLRLA 229 (265)
Q Consensus 208 ~g~~~~~~i~~~l~~~~~~~~~ 229 (265)
.-+.+|-++..++.+.+||.++
T Consensus 218 tlgSvGviist~Li~~~gw~~a 239 (354)
T KOG1484|consen 218 TLGSVGVIISTLLIKLFGWMIA 239 (354)
T ss_pred HhcchHHHHHHHHHHhcCccch
Confidence 4445666777777887777543
No 407
>COG3105 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.07 E-value=2.2e+02 Score=19.70 Aligned_cols=21 Identities=14% Similarity=0.200 Sum_probs=13.8
Q ss_pred hhhhHHHHHHHHHHhhhchHH
Q 024637 119 LAELPGLILSAIIVDKIGRKL 139 (265)
Q Consensus 119 ~~~~~~~~~~g~l~dr~grr~ 139 (265)
+.+++.+++.|+++-|++.+.
T Consensus 12 ~igLvvGi~IG~li~Rlt~~~ 32 (138)
T COG3105 12 LIGLVVGIIIGALIARLTNRK 32 (138)
T ss_pred HHHHHHHHHHHHHHHHHcchh
Confidence 344566677788888876553
Done!