Query 024641
Match_columns 265
No_of_seqs 20 out of 22
Neff 1.9
Searched_HMMs 29240
Date Mon Mar 25 11:51:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024641.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024641hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aq4_A SN-glycerol-3-phosphate 81.4 3 0.0001 34.0 6.0 38 81-118 379-416 (419)
2 2uvj_A TOGB, ABC type periplas 69.5 5.5 0.00019 33.1 4.6 34 80-113 371-404 (408)
3 2b3f_A Glucose-binding protein 67.6 2.7 9.4E-05 35.0 2.4 39 80-119 357-395 (400)
4 1ekq_A Hydroxyethylthiazole ki 67.3 12 0.00041 31.3 6.2 56 81-138 198-253 (272)
5 4b3n_A Maltose-binding peripla 67.1 2.1 7.2E-05 39.2 1.7 35 80-114 354-388 (602)
6 4exk_A Maltose-binding peripla 63.1 7.5 0.00026 34.8 4.5 31 80-110 344-374 (487)
7 3mq9_A Bone marrow stromal ant 61.4 17 0.00059 31.9 6.4 40 80-119 354-393 (471)
8 2ddm_A Pyridoxine kinase; pyri 61.3 13 0.00045 30.0 5.2 37 81-117 233-269 (283)
9 1g60_A Adenine-specific methyl 58.5 4.9 0.00017 33.0 2.3 56 25-84 200-256 (260)
10 2yxd_A Probable cobalt-precorr 57.5 6.5 0.00022 28.2 2.5 37 46-82 38-77 (183)
11 3njr_A Precorrin-6Y methylase; 54.6 7.6 0.00026 30.3 2.7 37 46-82 58-97 (204)
12 3n94_A Fusion protein of malto 54.2 20 0.00068 31.0 5.5 38 80-117 342-379 (475)
13 4h1g_A Maltose binding protein 53.4 7.6 0.00026 36.9 3.0 34 80-113 341-374 (715)
14 2gh9_A Maltose/maltodextrin-bi 53.2 17 0.00057 30.0 4.6 32 81-112 346-378 (386)
15 2zyo_A Solute-binding protein; 53.0 21 0.00071 29.5 5.2 32 81-112 361-392 (397)
16 1ws6_A Methyltransferase; stru 52.5 8.1 0.00028 27.6 2.3 38 46-83 44-84 (171)
17 2yxt_A Pyridoxal kinase; beta 51.6 32 0.0011 28.3 6.1 43 81-123 235-278 (312)
18 2z8f_A Galacto-N-biose/lacto-N 51.3 19 0.00065 30.1 4.7 33 81-113 372-404 (412)
19 3h3g_A Fusion protein of malto 50.7 7.3 0.00025 34.8 2.3 45 80-124 342-386 (539)
20 3dzv_A 4-methyl-5-(beta-hydrox 50.7 28 0.00097 30.1 5.9 66 70-139 188-257 (273)
21 4hw8_A Bacterial extracellular 50.5 17 0.00057 30.4 4.3 37 80-117 376-412 (420)
22 2gha_A Maltose ABC transporter 49.7 19 0.00064 29.6 4.4 32 81-112 342-373 (382)
23 3mti_A RRNA methylase; SAM-dep 48.2 12 0.0004 27.7 2.7 38 46-83 25-65 (185)
24 2p8j_A S-adenosylmethionine-de 48.1 11 0.00036 28.2 2.5 37 46-82 26-66 (209)
25 2w7y_A FCSSBP, probable sugar 47.7 16 0.00055 30.6 3.8 29 81-109 398-426 (430)
26 2r3b_A YJEF-related protein; p 47.4 22 0.00075 30.9 4.7 51 82-138 236-286 (310)
27 1eu8_A Trehalose/maltose bindi 46.1 27 0.00092 28.9 4.8 31 81-111 374-404 (409)
28 2xd3_A MALX, maltose/maltodext 45.9 27 0.00091 29.2 4.8 31 81-111 379-409 (416)
29 2xz3_A Maltose ABC transporter 45.2 27 0.00091 30.6 4.9 36 81-116 342-377 (463)
30 3oai_A Maltose-binding peripla 45.2 18 0.0006 30.8 3.6 35 80-114 340-374 (507)
31 2fhp_A Methylase, putative; al 45.1 14 0.00048 26.9 2.7 39 46-84 47-89 (187)
32 2kw5_A SLR1183 protein; struct 44.3 12 0.00042 27.9 2.3 37 46-82 32-71 (202)
33 3bgk_A SMU.573, putative uncha 43.4 36 0.0012 29.6 5.4 51 82-138 252-303 (311)
34 1nkv_A Hypothetical protein YJ 42.8 11 0.00037 29.1 1.8 38 46-83 39-80 (256)
35 3ocj_A Putative exported prote 42.5 19 0.00064 29.4 3.3 37 46-82 121-163 (305)
36 4g68_A ABC transporter; transp 42.3 26 0.00087 29.9 4.2 29 80-108 425-453 (456)
37 3i3v_A Probable secreted solut 41.9 23 0.00079 29.2 3.8 31 80-110 366-396 (405)
38 4gek_A TRNA (CMO5U34)-methyltr 41.1 16 0.00054 30.2 2.7 37 46-82 73-116 (261)
39 4b6i_A SMA2266; signaling prot 40.3 5.1 0.00017 31.6 -0.4 26 25-50 57-87 (102)
40 2esr_A Methyltransferase; stru 40.3 13 0.00044 27.2 1.8 37 46-82 34-74 (177)
41 3hm2_A Precorrin-6Y C5,15-meth 39.9 19 0.00067 25.9 2.7 37 46-82 28-69 (178)
42 4hs7_A Bacterial extracellular 39.8 45 0.0015 27.7 5.3 32 81-113 377-408 (420)
43 3dlc_A Putative S-adenosyl-L-m 39.8 14 0.00048 27.3 2.0 37 46-82 46-86 (219)
44 2a14_A Indolethylamine N-methy 39.6 47 0.0016 26.5 5.2 53 24-82 42-98 (263)
45 2vgq_A Maltose-binding peripla 39.0 94 0.0032 27.0 7.4 50 81-132 356-405 (477)
46 3k01_A Acarbose/maltose bindin 38.8 41 0.0014 27.9 4.8 31 81-111 377-407 (412)
47 2xvm_A Tellurite resistance pr 38.2 18 0.00063 26.4 2.4 37 46-82 35-74 (199)
48 1dus_A MJ0882; hypothetical pr 37.9 19 0.00063 26.0 2.3 37 46-82 55-94 (194)
49 4gqo_A LMO0859 protein; virule 37.9 44 0.0015 27.7 4.9 34 78-111 397-430 (433)
50 1l3i_A Precorrin-6Y methyltran 37.9 21 0.00071 25.6 2.6 37 46-82 36-75 (192)
51 3p9n_A Possible methyltransfer 37.7 18 0.00063 27.0 2.4 38 46-83 47-88 (189)
52 3dm0_A Maltose-binding peripla 37.3 38 0.0013 30.0 4.6 30 81-110 341-370 (694)
53 3quf_A Extracellular solute-bi 37.2 24 0.00083 29.1 3.2 31 80-110 380-410 (414)
54 3eey_A Putative rRNA methylase 37.2 21 0.00071 26.6 2.6 37 46-82 25-67 (197)
55 3iot_A Maltose-binding protein 36.6 64 0.0022 27.5 5.9 35 80-114 340-374 (449)
56 3oo8_A ABC transporter binding 36.4 30 0.001 28.6 3.6 30 81-110 381-412 (415)
57 1elj_A Maltodextrin-binding pr 36.3 48 0.0017 27.2 4.9 30 81-110 346-377 (381)
58 3h74_A Pyridoxal kinase; PSI-I 36.1 66 0.0023 26.8 5.8 61 81-145 215-275 (282)
59 2zig_A TTHA0409, putative modi 35.7 18 0.00061 30.2 2.2 45 37-83 233-278 (297)
60 1r6z_P Chimera of maltose-bind 35.5 12 0.00042 32.9 1.2 53 81-137 342-394 (509)
61 3tr6_A O-methyltransferase; ce 35.4 23 0.00078 26.9 2.6 39 46-84 67-111 (225)
62 3u81_A Catechol O-methyltransf 35.0 22 0.00076 27.4 2.5 39 46-84 61-105 (221)
63 4gfq_A Ribosome-recycling fact 35.0 65 0.0022 27.8 5.7 40 80-121 99-157 (209)
64 1wdk_A Fatty oxidation complex 35.0 15 0.00051 35.4 1.8 55 40-95 315-369 (715)
65 1ub0_A THID, phosphomethylpyri 34.9 22 0.00076 28.1 2.6 37 80-116 209-245 (258)
66 2nxc_A L11 mtase, ribosomal pr 34.4 16 0.00055 29.5 1.7 39 46-84 123-164 (254)
67 2qbx_A Ephrin type-B receptor 34.3 16 0.00056 31.8 1.8 28 41-70 103-130 (208)
68 3cgg_A SAM-dependent methyltra 33.8 18 0.00061 26.1 1.7 36 46-81 49-87 (195)
69 2ap1_A Putative regulator prot 33.7 42 0.0014 27.7 4.1 63 82-145 217-281 (327)
70 3gdh_A Trimethylguanosine synt 33.7 20 0.00069 27.6 2.1 38 46-83 81-121 (241)
71 3e05_A Precorrin-6Y C5,15-meth 33.6 26 0.00087 26.4 2.6 37 46-82 43-84 (204)
72 1hsj_A Fusion protein consisti 33.5 20 0.00069 30.9 2.3 60 81-140 341-416 (487)
73 3uor_A ABC transporter sugar b 33.2 50 0.0017 28.2 4.6 34 80-113 381-414 (458)
74 1boo_A Protein (N-4 cytosine-s 32.7 18 0.00061 30.9 1.8 53 26-82 241-294 (323)
75 3lcc_A Putative methyl chlorid 32.5 25 0.00087 27.0 2.5 38 45-82 68-108 (235)
76 2h00_A Methyltransferase 10 do 32.5 18 0.00062 28.3 1.7 39 46-84 68-111 (254)
77 1v8a_A Hydroxyethylthiazole ki 32.1 72 0.0025 26.7 5.3 52 82-138 196-247 (265)
78 3vov_A Glucokinase, hexokinase 31.6 37 0.0013 28.2 3.5 64 80-144 183-248 (302)
79 3bus_A REBM, methyltransferase 31.6 20 0.0007 27.9 1.8 39 46-84 64-106 (273)
80 3thr_A Glycine N-methyltransfe 31.4 26 0.00089 27.7 2.4 38 46-83 60-100 (293)
81 2wo1_A Ephrin type-A receptor; 31.2 18 0.00063 30.9 1.6 28 41-70 76-103 (185)
82 2bba_A Ephrin type-B receptor 31.2 20 0.00068 30.6 1.8 28 41-70 80-107 (185)
83 3cay_A LPD-12; alpha helix, ac 31.1 40 0.0014 21.3 2.7 15 99-113 9-23 (27)
84 1wzn_A SAM-dependent methyltra 31.1 22 0.00074 27.5 1.9 39 46-84 44-85 (252)
85 2ift_A Putative methylase HI07 31.1 23 0.00079 27.3 2.0 38 46-83 56-97 (201)
86 3mb5_A SAM-dependent methyltra 30.9 28 0.00096 27.1 2.5 38 46-83 96-139 (255)
87 1urs_A Maltose-binding protein 30.9 31 0.001 28.6 2.8 31 81-112 367-397 (402)
88 1ve3_A Hypothetical protein PH 30.8 22 0.00077 26.6 1.9 37 46-82 41-80 (227)
89 3csg_A MBP, maltose-binding pr 30.5 49 0.0017 28.4 4.1 28 81-108 339-366 (461)
90 2fe0_A SMP-1, small myristoyla 30.3 37 0.0013 27.6 3.2 27 43-69 30-57 (136)
91 1y60_A Formaldehyde-activating 29.8 59 0.002 27.8 4.4 42 78-119 85-144 (169)
92 3m70_A Tellurite resistance pr 29.7 23 0.00079 28.2 1.8 37 46-82 123-162 (286)
93 3c8x_A Ephrin type-A receptor 29.7 24 0.00082 30.7 2.1 28 41-70 103-130 (206)
94 3e8s_A Putative SAM dependent 29.6 20 0.00067 26.6 1.3 37 45-81 54-93 (227)
95 2i5b_A Phosphomethylpyrimidine 29.6 31 0.0011 27.5 2.6 35 81-115 216-250 (271)
96 3r8e_A Hypothetical sugar kina 28.8 61 0.0021 27.0 4.4 51 94-145 220-272 (321)
97 3ofk_A Nodulation protein S; N 28.7 29 0.00098 26.1 2.1 37 45-81 53-92 (216)
98 3bzb_A Uncharacterized protein 28.5 48 0.0016 27.1 3.6 37 46-82 82-123 (281)
99 4db3_A Glcnac kinase, N-acetyl 28.2 65 0.0022 27.1 4.5 64 81-145 216-281 (327)
100 3pzs_A PM kinase, pyridoxamine 28.1 1.2E+02 0.004 25.0 5.9 37 81-117 226-262 (289)
101 3py7_A Maltose-binding peripla 27.9 58 0.002 28.8 4.3 32 80-111 341-372 (523)
102 3e23_A Uncharacterized protein 27.9 29 0.001 26.1 2.1 37 46-82 46-85 (211)
103 1i9g_A Hypothetical protein RV 27.9 27 0.00093 27.5 2.0 37 46-82 102-144 (280)
104 3fpf_A Mtnas, putative unchara 27.8 28 0.00095 30.8 2.2 39 46-84 125-168 (298)
105 3tfw_A Putative O-methyltransf 27.8 34 0.0012 27.3 2.5 39 45-83 65-109 (248)
106 3osq_A Maltose-binding peripla 27.8 49 0.0017 31.4 4.0 34 80-113 622-655 (661)
107 3dh0_A SAM dependent methyltra 27.7 33 0.0011 25.7 2.3 38 46-83 40-83 (219)
108 1d8w_A L-rhamnose isomerase; b 27.6 52 0.0018 31.6 4.1 56 72-134 343-398 (426)
109 2yqz_A Hypothetical protein TT 27.5 23 0.0008 27.2 1.5 37 46-82 42-81 (263)
110 3evz_A Methyltransferase; NYSG 27.5 25 0.00084 26.8 1.6 37 46-82 58-99 (230)
111 2fpo_A Methylase YHHF; structu 27.5 29 0.00099 26.8 2.0 37 46-82 57-97 (202)
112 1ge9_A Ribosome recycling fact 27.5 96 0.0033 26.0 5.3 39 80-121 78-135 (184)
113 3duw_A OMT, O-methyltransferas 27.4 37 0.0013 25.8 2.6 38 46-83 61-104 (223)
114 2wtb_A MFP2, fatty acid multif 27.0 14 0.0005 35.6 0.3 52 42-94 315-366 (725)
115 3p1i_A Ephrin type-B receptor 27.0 27 0.00091 30.4 1.9 28 41-70 99-126 (200)
116 2dpo_A L-gulonate 3-dehydrogen 26.9 15 0.00052 31.8 0.3 54 40-94 7-60 (319)
117 3o3u_N Maltose-binding peripla 26.8 49 0.0017 28.5 3.5 30 80-109 340-369 (581)
118 3p14_A L-rhamnose isomerase; T 26.7 70 0.0024 30.4 4.8 48 81-134 348-396 (424)
119 1o9g_A RRNA methyltransferase; 26.7 35 0.0012 26.8 2.4 40 45-84 53-99 (250)
120 3ujc_A Phosphoethanolamine N-m 26.6 16 0.00055 28.0 0.4 37 46-82 58-98 (266)
121 2nvu_B Maltose binding protein 26.5 24 0.00082 33.6 1.6 31 81-111 345-375 (805)
122 1mh3_A Maltose binding-A1 home 26.3 49 0.0017 27.5 3.3 31 81-111 341-371 (421)
123 3sm3_A SAM-dependent methyltra 26.1 25 0.00084 26.3 1.3 37 46-82 33-72 (235)
124 3lbf_A Protein-L-isoaspartate 26.0 28 0.00096 26.1 1.7 37 46-82 80-119 (210)
125 3c3p_A Methyltransferase; NP_9 26.0 41 0.0014 25.5 2.6 37 46-82 59-101 (210)
126 1o54_A SAM-dependent O-methylt 25.8 31 0.0011 27.6 2.0 37 46-82 115-157 (277)
127 1kpg_A CFA synthase;, cyclopro 25.8 28 0.00097 27.6 1.7 37 46-82 67-107 (287)
128 3mgg_A Methyltransferase; NYSG 25.3 47 0.0016 26.0 2.9 57 24-84 22-83 (276)
129 3etp_A Ephrin type-B receptor 25.1 29 0.00098 29.8 1.7 28 41-70 79-106 (187)
130 3mp6_A MBP, SGF29, maltose-bin 25.0 72 0.0025 28.3 4.3 28 80-107 341-368 (522)
131 1vbf_A 231AA long hypothetical 24.9 30 0.001 26.4 1.7 36 46-81 73-111 (231)
132 4htf_A S-adenosylmethionine-de 24.8 32 0.0011 27.3 1.9 38 46-83 71-111 (285)
133 2o57_A Putative sarcosine dime 24.7 30 0.001 27.5 1.7 39 46-84 85-127 (297)
134 2apl_A Hypothetical protein PG 24.5 91 0.0031 26.4 4.6 30 78-107 36-65 (157)
135 3h2b_A SAM-dependent methyltra 24.4 24 0.00083 26.2 1.0 36 46-81 44-82 (203)
136 3g2m_A PCZA361.24; SAM-depende 24.3 28 0.00096 28.0 1.5 39 46-84 85-126 (299)
137 3jtz_A Integrase; four strande 24.1 2.1E+02 0.0071 20.8 6.5 66 21-98 2-82 (88)
138 2pwy_A TRNA (adenine-N(1)-)-me 23.9 48 0.0016 25.5 2.6 37 46-82 99-141 (258)
139 3ob4_A Conglutin, maltose ABC 23.6 66 0.0023 28.4 3.8 32 80-111 340-371 (500)
140 3dr5_A Putative O-methyltransf 23.3 37 0.0013 27.1 1.9 37 46-82 59-101 (221)
141 2hnk_A SAM-dependent O-methylt 23.2 44 0.0015 26.1 2.3 38 46-83 63-106 (239)
142 2g72_A Phenylethanolamine N-me 23.2 48 0.0017 26.5 2.6 38 45-82 73-114 (289)
143 2i62_A Nicotinamide N-methyltr 23.0 63 0.0022 24.7 3.2 38 45-82 58-99 (265)
144 1y8c_A S-adenosylmethionine-de 23.0 42 0.0014 25.2 2.1 38 46-83 40-80 (246)
145 3ie7_A LIN2199 protein; phosph 22.8 1.3E+02 0.0043 24.5 5.1 32 81-112 253-284 (320)
146 2zxt_A Maltose-binding peripla 22.7 82 0.0028 27.5 4.2 28 81-108 341-368 (465)
147 3ntv_A MW1564 protein; rossman 22.6 42 0.0014 26.3 2.1 37 46-82 74-115 (232)
148 3hnr_A Probable methyltransfer 22.5 35 0.0012 25.6 1.6 37 45-81 47-86 (220)
149 3vc1_A Geranyl diphosphate 2-C 22.5 35 0.0012 27.9 1.7 39 46-84 120-162 (312)
150 3h4z_A Maltose-binding peripla 22.3 1.6E+02 0.0055 26.9 6.2 30 80-109 340-369 (568)
151 3oyv_A Imelysin; outer membran 22.2 1.9E+02 0.0065 26.1 6.6 71 60-133 227-300 (361)
152 2yxe_A Protein-L-isoaspartate 22.1 36 0.0012 25.6 1.6 37 46-82 80-122 (215)
153 2qcv_A Putative 5-dehydro-2-de 22.0 1.4E+02 0.0049 24.3 5.3 32 81-112 273-304 (332)
154 2qe6_A Uncharacterized protein 21.9 45 0.0015 27.5 2.2 38 45-82 79-124 (274)
155 3h49_A Ribokinase; transferase 21.7 1.3E+02 0.0046 24.6 5.1 31 81-111 262-292 (325)
156 2pxx_A Uncharacterized protein 21.7 27 0.00093 25.7 0.8 36 46-81 45-84 (215)
157 3umo_A 6-phosphofructokinase i 21.7 1.3E+02 0.0045 24.2 4.9 31 81-111 256-286 (309)
158 3ju0_A Phage integrase; four s 21.5 92 0.0031 23.6 3.8 67 22-100 3-84 (108)
159 2gup_A ROK family protein; sug 21.5 97 0.0033 25.0 4.1 49 95-144 188-238 (292)
160 2abq_A Fructose 1-phosphate ki 21.5 1.5E+02 0.0051 23.9 5.3 32 81-112 249-280 (306)
161 1eg2_A Modification methylase 21.5 36 0.0012 29.4 1.7 45 36-82 239-287 (319)
162 1apy_B Aspartylglucosaminidase 21.5 83 0.0029 25.5 3.7 19 87-105 67-85 (141)
163 1jxh_A Phosphomethylpyrimidine 21.4 1.1E+02 0.0037 25.0 4.4 33 81-113 235-267 (288)
164 2b25_A Hypothetical protein; s 21.4 45 0.0015 27.7 2.2 37 46-82 108-150 (336)
165 3pl2_A Sugar kinase, ribokinas 21.4 1.4E+02 0.0048 24.1 5.1 31 81-111 265-295 (319)
166 4hff_B Putative periplasmic pr 21.3 11 0.00038 29.8 -1.5 26 25-50 58-88 (104)
167 2v78_A Fructokinase; transfera 21.2 1.4E+02 0.0049 24.1 5.1 32 81-112 258-289 (313)
168 3g5t_A Trans-aconitate 3-methy 21.1 48 0.0016 26.7 2.2 39 45-83 38-82 (299)
169 3osr_A Maltose-binding peripla 21.0 79 0.0027 30.0 4.0 37 72-108 601-651 (653)
170 2yvl_A TRMI protein, hypotheti 21.0 40 0.0014 25.8 1.6 37 46-82 94-133 (248)
171 1v1a_A 2-keto-3-deoxygluconate 20.8 1.5E+02 0.0051 24.0 5.1 32 81-112 251-282 (309)
172 3m33_A Uncharacterized protein 20.7 48 0.0016 25.6 2.0 36 46-81 51-89 (226)
173 3cqd_A 6-phosphofructokinase i 20.6 1.4E+02 0.0048 24.0 4.9 32 81-112 256-287 (309)
174 2p7i_A Hypothetical protein; p 20.5 36 0.0012 25.5 1.3 37 46-82 45-84 (250)
175 2fk8_A Methoxy mycolic acid sy 20.5 41 0.0014 27.3 1.7 37 46-82 93-133 (318)
176 1vl5_A Unknown conserved prote 20.5 52 0.0018 25.6 2.2 40 45-84 39-81 (260)
177 4du5_A PFKB; structural genomi 20.4 1.5E+02 0.005 24.6 5.1 32 81-112 285-316 (336)
178 1i1n_A Protein-L-isoaspartate 20.3 51 0.0017 25.1 2.1 37 46-82 80-122 (226)
179 4htl_A Beta-glucoside kinase; 20.2 1E+02 0.0036 25.4 4.1 50 95-145 198-249 (297)
180 3mbh_A Putative phosphomethylp 20.1 1.5E+02 0.005 24.8 5.1 53 81-138 225-277 (291)
181 3dtn_A Putative methyltransfer 20.1 36 0.0012 25.9 1.2 38 45-82 46-88 (234)
182 2c4e_A Sugar kinase MJ0406; tr 20.1 1.5E+02 0.005 24.0 4.9 31 81-111 247-277 (302)
183 3f5f_A Maltose-binding peripla 20.1 56 0.0019 30.0 2.7 32 80-111 340-371 (658)
184 3gu3_A Methyltransferase; alph 20.1 60 0.002 26.1 2.6 38 45-82 24-67 (284)
185 1g8a_A Fibrillarin-like PRE-rR 20.1 52 0.0018 25.1 2.1 35 46-80 76-116 (227)
186 3pfg_A N-methyltransferase; N, 20.0 45 0.0016 26.0 1.8 37 46-82 53-92 (263)
No 1
>4aq4_A SN-glycerol-3-phosphate-binding periplasmic prote; diester-binding protein; HET: G3P; 1.80A {Escherichia coli}
Probab=81.36 E-value=3 Score=34.03 Aligned_cols=38 Identities=11% Similarity=0.196 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQ 118 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQ 118 (265)
.++..+++..+...++++||.+++|++..+.-|...+.
T Consensus 379 ~~~~~~~~~~~~g~~t~e~al~~~~~~~~~~L~~y~k~ 416 (419)
T 4aq4_A 379 VIVDEELESVWTGKKTPQQALDTAVERGNQLLRRFEKS 416 (419)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788899999999999999999999988877665443
No 2
>2uvj_A TOGB, ABC type periplasmic sugar-binding protein; periplasmic binding protein, pectin degradation, trigalacturonic acid; HET: ADA; 1.8A {Yersinia enterocolitica} PDB: 2uvi_A* 2uvh_A* 2uvg_A 3u1o_A
Probab=69.49 E-value=5.5 Score=33.06 Aligned_cols=34 Identities=15% Similarity=0.067 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAK 113 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAK 113 (265)
+.++..+|++++...+++++|++++|++..+.-+
T Consensus 371 ~~~~~~~~~~~~~G~~t~~~al~~~~~~~~~~l~ 404 (408)
T 2uvj_A 371 VSLFGDAIQYIDYGQKTVQETAEYFNKQGDRILK 404 (408)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 3567888889999899999999999998776544
No 3
>2b3f_A Glucose-binding protein; protein-carbohydrate complex, periplasmic binding protein, galactose, GBP, sugar binding protein; HET: GAL; 1.56A {Thermus thermophilus HB27} PDB: 2b3b_A*
Probab=67.59 E-value=2.7 Score=35.01 Aligned_cols=39 Identities=15% Similarity=-0.024 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHh
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQA 119 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQA 119 (265)
+.++..++++.+... +++||++++|+...++-+...||-
T Consensus 357 ~~~~~~~~~~~~~g~-~~~~al~~~~~~~~~~~~~~~~~~ 395 (400)
T 2b3f_A 357 MSQFGTVMEIFLQTR-NPQAAANAAQAIADQVGLGRLGQH 395 (400)
T ss_dssp HHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTTCC---
T ss_pred HHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHhhhcccccc
Confidence 357788888888888 999999999998888777776664
No 4
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=67.32 E-value=12 Score=31.25 Aligned_cols=56 Identities=20% Similarity=0.059 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhhh
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIY 138 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEalY 138 (265)
.++-.++.-.+.+|+++.||++.|......|+..|..+ ++--|| =+.--|+++.||
T Consensus 198 D~lag~iaa~la~g~~~~~A~~~A~~~~~~A~~~a~~~-~~~~g~-g~~~~~~id~l~ 253 (272)
T 1ekq_A 198 CLLTSVVGAFCAVEENPLFAAIAAISSYGVAAQLAAQQ-TADKGP-GSFQIELLNKLS 253 (272)
T ss_dssp HHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHH-HTTSCH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhc-cCCCCC-ChHHHHHHHHHH
Confidence 56777788888999999999999999888888888764 112366 344578888887
No 5
>4b3n_A Maltose-binding periplasmic protein, tripartite motif-containing protein 5; sugar binding protein-ligase complex; HET: MAL MES; 3.30A {Escherichia coli} PDB: 2lm3_A
Probab=67.13 E-value=2.1 Score=39.22 Aligned_cols=35 Identities=26% Similarity=0.205 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKL 114 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKl 114 (265)
..++..+|++++...+||+||+++||++-++..+.
T Consensus 354 ~~~l~~~l~~vl~G~~tpeeAl~~aq~~I~~~i~~ 388 (602)
T 4b3n_A 354 WYAVRTAVINAASGRQTVDEALKDAQTRITRRVFR 388 (602)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 45788899999999999999999999987765443
No 6
>4exk_A Maltose-binding periplasmic protein, uncharacteri protein chimera; MCSG, pcsep, MBP-fused target, structural genomics; HET: MTT; 1.28A {Escherichia coli} PDB: 3g7v_A* 3g7w_A* 3sev_A* 3ser_A* 3sew_A* 3set_A* 3ses_A* 3seu_A* 3sex_A* 3sey_A* 3q27_A* 3q28_A* 3q26_A* 3q25_A* 3q29_A* 1nmu_A* 2ok2_A* 3pgf_A* 1t0k_A* 3rum_A* ...
Probab=63.13 E-value=7.5 Score=34.80 Aligned_cols=31 Identities=29% Similarity=0.258 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAK 110 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~k 110 (265)
..++..+|++++...++|+||.++||++...
T Consensus 344 ~~~l~~al~~vl~G~~tpeeAL~~aq~~a~A 374 (487)
T 4exk_A 344 WYAVRTAVINAASGRQTVDAALAAAQTNAAA 374 (487)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 3578889999999999999999999998764
No 7
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=61.43 E-value=17 Score=31.86 Aligned_cols=40 Identities=25% Similarity=0.175 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHh
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQA 119 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQA 119 (265)
..++..++.+++...+++++|.+.+++...++-+....++
T Consensus 354 ~~~~~~~~~~vl~G~~t~eeal~~~~~~i~~~l~~~~~~~ 393 (471)
T 3mq9_A 354 WYAVRTAVINAASGRQTVDEALKDAQTRITAARDGLRAVM 393 (471)
T ss_dssp HHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhHHHH
Confidence 3578899999999999999999999999988877766554
No 8
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=61.26 E-value=13 Score=30.03 Aligned_cols=37 Identities=14% Similarity=0.164 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKR 117 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~r 117 (265)
.+.-.++..++.+|+++.+|++.|...+..+.+.+..
T Consensus 233 Daf~a~~~~~l~~g~~~~~A~~~A~a~a~~~v~~~~~ 269 (283)
T 2ddm_A 233 DLFCAQLISGLLKGKALTDAVHRAGLRVLEVMRYTQQ 269 (283)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 5778889999999999999999999988888777665
No 9
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=58.50 E-value=4.9 Score=32.99 Aligned_cols=56 Identities=32% Similarity=0.452 Sum_probs=39.9
Q ss_pred HHHHHHhccccccccCceeeeeeeccCCceeeeee-ecceEEEEeechhHHHHHHHHHHHH
Q 024641 25 EKCRQLVGEDASSQSGKFTILNCFDMGSGTVACGV-KEGVKLYFYNIRAAHVERARNVAIE 84 (265)
Q Consensus 25 EK~R~LVGee~sSkSGkFT~~nCFDmgsGtlACav-KEGVKLY~ynIRs~hvE~~R~~A~e 84 (265)
+=+++++ +.+++.|. +++++| +||||.+-++ +.|-+.+-.-|-...++.++.|+-+
T Consensus 200 ~l~~~~i--~~~~~~~~-~vlD~f-~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 200 DLIERII--RASSNPND-LVLDCF-MGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp HHHHHHH--HHHCCTTC-EEEESS-CTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC
T ss_pred HHHHHHH--HHhCCCCC-EEEECC-CCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh
Confidence 3345555 23455554 789988 8999876554 4688888889999889988888643
No 10
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=57.46 E-value=6.5 Score=28.23 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=27.5
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
.+.|+|||+= ....+.+.+++..-+-...++.+|+++
T Consensus 38 ~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~ 77 (183)
T 2yxd_A 38 VVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNL 77 (183)
T ss_dssp EEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHH
Confidence 6889999972 222336788999999888888887764
No 11
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=54.58 E-value=7.6 Score=30.32 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=26.7
Q ss_pred eeeccCCceee---eeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTVA---CGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtlA---CavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
.+.|+|||+=. ...+.+.+++..-|....++.+|+++
T Consensus 58 ~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~ 97 (204)
T 3njr_A 58 LLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNI 97 (204)
T ss_dssp EEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 58999998721 12334888999998888777777665
No 12
>3n94_A Fusion protein of maltose-binding periplasmic Pro pituitary adenylate cyclase 1 receptor-short...; G-protein coupled receptor; HET: MAL; 1.80A {Escherichia coli} PDB: 3ehs_A* 3ehu_A* 3eht_A* 3n93_A* 3n95_A* 3n96_A*
Probab=54.21 E-value=20 Score=30.95 Aligned_cols=38 Identities=29% Similarity=0.310 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKR 117 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~r 117 (265)
+.++..++.+++...+++++|.+++++...++-++-++
T Consensus 342 ~~~~~~~~~~~~~G~~t~eeal~~~~~~~~~~l~~l~~ 379 (475)
T 3n94_A 342 WYAVRTAVINAASGRQTVDEALKDAQTNAAAEFAIFKK 379 (475)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35788999999999999999999999998887766554
No 13
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=53.44 E-value=7.6 Score=36.88 Aligned_cols=34 Identities=26% Similarity=0.209 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAK 113 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAK 113 (265)
..++..+|.+++...++|+||.++||++.+++.+
T Consensus 341 ~~~l~~al~~vl~G~~tpeeAL~~Aq~~~~~il~ 374 (715)
T 4h1g_A 341 WYAVRTAVINAASGRQTVDAALAAAQTNAAALKG 374 (715)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHHSSSSC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHh
Confidence 3578889999999999999999999998777643
No 14
>2gh9_A Maltose/maltodextrin-binding protein; MBP, maltose binding protein, thermoph protein, periplasmic binding protein, sugar binding protein; HET: MLR; 1.95A {Thermus thermophilus}
Probab=53.16 E-value=17 Score=30.00 Aligned_cols=32 Identities=16% Similarity=0.008 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhcCC-ChHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGL-SSNDAAKQAQKEGAKAA 112 (265)
Q Consensus 81 ~A~e~AL~da~~qGl-s~~eaAk~Aqk~g~kAA 112 (265)
.++..+|++++...+ +++||++++|++..+..
T Consensus 346 ~~~~~~~~~~~~g~~~t~~~al~~~~~~~~~~~ 378 (386)
T 2gh9_A 346 GPWGNAISLAIQRPDSNVKKIVEDMVAEIKKAI 378 (386)
T ss_dssp HHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHh
Confidence 467888888888889 99999999988765543
No 15
>2zyo_A Solute-binding protein; open form, sugar binding protein; HET: GLC; 1.55A {Thermoactinomyces vulgaris} PDB: 2zyk_A* 2zym_A* 2zyn_A* 2dfz_A*
Probab=53.00 E-value=21 Score=29.46 Aligned_cols=32 Identities=16% Similarity=-0.003 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 112 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 112 (265)
.++..+|++++...++++||++++++...+..
T Consensus 361 ~~~~~~~~~~~~g~~~~~~al~~~~~~~~~~l 392 (397)
T 2zyo_A 361 EPINNAHTFVAQGKQTPEQALNDAVKIMKEKI 392 (397)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 46788888888888999999999998876554
No 16
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=52.50 E-value=8.1 Score=27.64 Aligned_cols=38 Identities=13% Similarity=0.054 Sum_probs=27.4
Q ss_pred eeeccCCce---eeeeeecceEEEEeechhHHHHHHHHHHH
Q 024641 46 NCFDMGSGT---VACGVKEGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 46 nCFDmgsGt---lACavKEGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
.+.|+|||+ .....+.|.+++..-+-...++.+|+++-
T Consensus 44 ~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~ 84 (171)
T 1ws6_A 44 RFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVR 84 (171)
T ss_dssp EEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHH
T ss_pred eEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH
Confidence 578999997 22334567778888888887887776653
No 17
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=51.57 E-value=32 Score=28.29 Aligned_cols=43 Identities=7% Similarity=-0.107 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 024641 81 VAIEKAVVDALSQ-GLSSNDAAKQAQKEGAKAAKLAKRQAKRII 123 (265)
Q Consensus 81 ~A~e~AL~da~~q-Gls~~eaAk~Aqk~g~kAAKlA~rQAkRI~ 123 (265)
.+.-.++..++.+ |+++.+|++.|...+..+.+.+....+.+.
T Consensus 235 Daf~a~~~~~l~~~g~~l~~a~~~A~a~a~~~v~~~~~~~~~~~ 278 (312)
T 2yxt_A 235 DLFAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQRTIQCAKAQA 278 (312)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 5777888999998 999999999999999888887776554444
No 18
>2z8f_A Galacto-N-biose/lacto-N-biose I transporter subst binding protein; ABC transporter, mucin core-1, human MILK oligosacchalide; HET: BGC GAL NAG MES; 1.65A {Bifidobacterium longum} PDB: 2z8e_A* 2z8d_A*
Probab=51.27 E-value=19 Score=30.06 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAK 113 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAK 113 (265)
.++..+|.+++...+++++|++++|++..+..+
T Consensus 372 ~~~~~~~~~~~~g~~~~~~al~~~~~~~~~~l~ 404 (412)
T 2z8f_A 372 AKMNETAAKATDGSGKVADIFSDAQTTSVDTLK 404 (412)
T ss_dssp HHHHHHHHHGGGTSSCTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 567788888888889999999999988765543
No 19
>3h3g_A Fusion protein of maltose-binding periplasmic DOM human parathyroid hormone receptor...; GPCR, extracellular domain, PTHRP, PTH, PThr1, sugar transpo transport, membrane protein; HET: MAL; 1.94A {Escherichia coli} PDB: 3c4m_A* 3l2j_A*
Probab=50.67 E-value=7.3 Score=34.75 Aligned_cols=45 Identities=24% Similarity=0.217 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIG 124 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~G 124 (265)
..++..++.+++...+++++|.++++++..++.+....+.++++-
T Consensus 342 ~~~~~~~~~~~~~G~~s~eeAl~~~~~~i~~~l~~~~~~~~~~~~ 386 (539)
T 3h3g_A 342 WYAVRTAVINAASGRQTVDEALKDAQTNAAAEFDDVMTKEEQIFL 386 (539)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHHTC----CCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 357888999999999999999999999988776665555555543
No 20
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=50.67 E-value=28 Score=30.11 Aligned_cols=66 Identities=15% Similarity=0.061 Sum_probs=48.3
Q ss_pred chhHHHHHHH----HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhhhh
Q 024641 70 IRAAHVERAR----NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIYY 139 (265)
Q Consensus 70 IRs~hvE~~R----~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEalYy 139 (265)
+++.|....| =-.+-.++...+.+|.++.+|+..|...-..|+.+|.++++ || =|--.+|+.+||-
T Consensus 188 ~~~G~~~~~~v~GtGc~Ls~~Iaa~lA~g~~~~~Aa~~A~~~~~~Age~A~~~~~---g~-Gsf~~~llD~L~~ 257 (273)
T 3dzv_A 188 LQNGVPELDCFTGTGDLVGALVAALLGEGNAPMTAAVAAVSYFNLCGEKAKTKSQ---GL-ADFRQNTLNQLSL 257 (273)
T ss_dssp ECCCCGGGGSSTTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCS---SH-HHHHHHHHHHHHH
T ss_pred eCCCCcccCCcCCchHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhCC---CC-ccHHHHHHHHHHc
Confidence 4455544444 13455677777889999999999999999999999887754 55 3445688888884
No 21
>4hw8_A Bacterial extracellular solute-binding protein, P; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MAL; 2.25A {Staphylococcus aureus subsp} PDB: 4hs7_A*
Probab=50.50 E-value=17 Score=30.37 Aligned_cols=37 Identities=11% Similarity=0.061 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKR 117 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~r 117 (265)
..++..++++.+... ++++|.++++++..++.+...+
T Consensus 376 ~~~~~~~~~~~~~G~-~~~~al~~~~~~~~~~l~~~~~ 412 (420)
T 4hw8_A 376 WEPMGNASIFISNGK-NPKQALDEATNDITQNIKILHP 412 (420)
T ss_dssp HHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHhCC
Confidence 356788888888877 9999999999998887766544
No 22
>2gha_A Maltose ABC transporter, periplasmic maltose-BIND protein; periplasmic binding protein, MBP, maltotriose; HET: MLR; 1.60A {Thermotoga maritima} PDB: 2ghb_A 2fnc_A*
Probab=49.65 E-value=19 Score=29.65 Aligned_cols=32 Identities=16% Similarity=0.099 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 112 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 112 (265)
.++..++++++...+++++|++++|++..++.
T Consensus 342 ~~~~~~~~~~~~g~~~~~~al~~~~~~~~~~l 373 (382)
T 2gha_A 342 AAMNDALNLVVNGKATVEEALKNAVERIKAQI 373 (382)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 46778888888888999999999988765543
No 23
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=48.18 E-value=12 Score=27.68 Aligned_cols=38 Identities=11% Similarity=0.118 Sum_probs=26.9
Q ss_pred eeeccCCceee---eeeecceEEEEeechhHHHHHHHHHHH
Q 024641 46 NCFDMGSGTVA---CGVKEGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 46 nCFDmgsGtlA---CavKEGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
.+.|+||||=. ...+.+.+++..-|-..-++.+|+++-
T Consensus 25 ~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~ 65 (185)
T 3mti_A 25 IVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLS 65 (185)
T ss_dssp EEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHH
Confidence 57899999721 123448889988888887777776653
No 24
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=48.09 E-value=11 Score=28.16 Aligned_cols=37 Identities=27% Similarity=0.415 Sum_probs=26.6
Q ss_pred eeeccCCcee----eeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV----ACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl----ACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
...|+|||+= ....+.|.+++..-+-...++.+|+++
T Consensus 26 ~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~ 66 (209)
T 2p8j_A 26 TVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFS 66 (209)
T ss_dssp EEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH
Confidence 5677888862 233567888888888888888777664
No 25
>2w7y_A FCSSBP, probable sugar ABC transporter, sugar-binding protein; solute-binding protein, blood group antigen, carbohydrate transport; HET: A2G GAL FUC; 2.35A {Streptococcus pneumoniae}
Probab=47.70 E-value=16 Score=30.58 Aligned_cols=29 Identities=17% Similarity=0.221 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGA 109 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~ 109 (265)
.++..+|.+++..++++++|++++|++..
T Consensus 398 ~~~~~~~~~~~~g~~~~~~al~~~~~~~~ 426 (430)
T 2w7y_A 398 TAIINALTESAAENVDVDQKVKSTQDVLK 426 (430)
T ss_dssp HHHHHHHHHTTSTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 56777888888889999999999887543
No 26
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=47.42 E-value=22 Score=30.91 Aligned_cols=51 Identities=8% Similarity=-0.059 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhhh
Q 024641 82 AIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIY 138 (265)
Q Consensus 82 A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEalY 138 (265)
.+-.++.-.+.+|+++.||++.|.-....|+.+|.++ ||- ..--|+++.|+
T Consensus 236 ~Lag~Iaa~lA~g~~~~eA~~~A~~~~~~ag~~a~~~-----g~~-~~a~dl~~~l~ 286 (310)
T 2r3b_A 236 TLAGIIAGFLAQFKPTIETIAGAVYLHSLIGDDLAKT-----DYV-VLPTKISQALP 286 (310)
T ss_dssp HHHHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTT-----CSS-CCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhh-----CCC-CCHHHHHHHHH
Confidence 4666777777899999999999987777777776654 643 34458887775
No 27
>1eu8_A Trehalose/maltose binding protein; protein-carbohydrate complex, MBP 2 fold, ABC transporter fold, thermophilic protein; HET: TRE; 1.90A {Thermococcus litoralis} SCOP: c.94.1.1
Probab=46.05 E-value=27 Score=28.91 Aligned_cols=31 Identities=35% Similarity=0.383 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 111 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 111 (265)
.++..++++++...+++++|.+++|++..++
T Consensus 374 ~~~~~~~~~~~~g~~~~~~al~~~~~~~~~~ 404 (409)
T 1eu8_A 374 EIIQKYVNSALAGKISPQEALDKAQKEAEEL 404 (409)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 5677888888888899999999999876553
No 28
>2xd3_A MALX, maltose/maltodextrin-binding protein; solute-binding protein, sugar binding protein, virulence, alpha-glucan, sugar transport; HET: GLC; 2.00A {Streptococcus pneumoniae} PDB: 2xd2_A*
Probab=45.92 E-value=27 Score=29.19 Aligned_cols=31 Identities=19% Similarity=0.118 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 111 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 111 (265)
.++..++++++...++++||++++|++..+.
T Consensus 379 ~~~~~~~~~~~~G~~t~~~al~~~~~~~~~~ 409 (416)
T 2xd3_A 379 DPAKNMLFDAVSGQKDAKTAANDAVTLIKET 409 (416)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 4677888888888899999999999876654
No 29
>2xz3_A Maltose ABC transporter periplasmic protein, ENVE glycoprotein; viral protein, viral membrane fusion, hairpin, chimera; HET: MAL; 1.95A {Escherichia coli} PDB: 1mg1_A*
Probab=45.22 E-value=27 Score=30.60 Aligned_cols=36 Identities=25% Similarity=0.220 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAK 116 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~ 116 (265)
.++..++++++...++|++|++++|+...+..+...
T Consensus 342 ~~~~~~l~~~~~G~~t~eeal~~~~~~~~~~l~~~~ 377 (463)
T 2xz3_A 342 YAVRTAVINAASGRQTVDAALAAAQTNAAALSHQRL 377 (463)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhH
Confidence 467788888888889999999999998766555433
No 30
>3oai_A Maltose-binding periplasmic protein, myelin prote; schwann cell membrane protein, immunoglobulin-folding, inter adhesion, tetramer; HET: MAL; 2.10A {Escherichia coli}
Probab=45.16 E-value=18 Score=30.76 Aligned_cols=35 Identities=26% Similarity=0.260 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKL 114 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKl 114 (265)
+.++..++.+++...+++++|.++++++..++.+.
T Consensus 340 ~~~~~~~~~~~~~g~~~~~~al~~~~~~~~~~l~~ 374 (507)
T 3oai_A 340 WYAVRTAVINAASGRQTVDEALKDAQTNNNNNNNN 374 (507)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhc
Confidence 35788999999999999999999999988777654
No 31
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=45.07 E-value=14 Score=26.89 Aligned_cols=39 Identities=18% Similarity=0.109 Sum_probs=27.9
Q ss_pred eeeccCCceeee---eeecc-eEEEEeechhHHHHHHHHHHHH
Q 024641 46 NCFDMGSGTVAC---GVKEG-VKLYFYNIRAAHVERARNVAIE 84 (265)
Q Consensus 46 nCFDmgsGtlAC---avKEG-VKLY~ynIRs~hvE~~R~~A~e 84 (265)
...|+|||+=.. ..+.+ .+++..-+-...++.+|+.+-.
T Consensus 47 ~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~ 89 (187)
T 2fhp_A 47 MALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAI 89 (187)
T ss_dssp EEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH
T ss_pred CEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHH
Confidence 578999987221 23344 6899999988888888877644
No 32
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=44.30 E-value=12 Score=27.88 Aligned_cols=37 Identities=11% Similarity=0.142 Sum_probs=25.4
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
...|+|||+= ....+.|.+++..-+-...++.+|+++
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~ 71 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLA 71 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHH
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence 5789999871 223345778888888777777776654
No 33
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=43.43 E-value=36 Score=29.60 Aligned_cols=51 Identities=10% Similarity=-0.012 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhhh
Q 024641 82 AIEKAVVDALSQ-GLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIY 138 (265)
Q Consensus 82 A~e~AL~da~~q-Gls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEalY 138 (265)
.+-.++.-.+.+ |+++.||++.|.-....|+.+|.++ ||- ..--|+++.|+
T Consensus 252 ~Lag~iaa~lA~~g~~~~eA~~~A~~~~~~ag~~a~~~-----g~~-~~a~dl~~~l~ 303 (311)
T 3bgk_A 252 TLAGMIAGFVAQFHTDRFEVAAAAVFLHSYIADQLSKE-----AYV-VLPTRISAEIT 303 (311)
T ss_dssp HHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHTT-----CSS-CCHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHhh-----CCC-CCHHHHHHHHH
Confidence 466677777789 9999999999988888887777654 643 33347777775
No 34
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=42.81 E-value=11 Score=29.14 Aligned_cols=38 Identities=18% Similarity=0.230 Sum_probs=27.2
Q ss_pred eeeccCCcee--e--eeeecceEEEEeechhHHHHHHHHHHH
Q 024641 46 NCFDMGSGTV--A--CGVKEGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 46 nCFDmgsGtl--A--CavKEGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
...|+|||+= + .+-+-|.+++...+-...++.+|+++-
T Consensus 39 ~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~ 80 (256)
T 1nkv_A 39 RILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAE 80 (256)
T ss_dssp EEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHH
Confidence 6789999872 2 222226788899998888888887764
No 35
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=42.48 E-value=19 Score=29.38 Aligned_cols=37 Identities=16% Similarity=0.153 Sum_probs=29.1
Q ss_pred eeeccCCce------eeeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGT------VACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGt------lACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
...|+|||+ ||+....+.+++..-+-...++.+|+++
T Consensus 121 ~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~ 163 (305)
T 3ocj_A 121 VVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLA 163 (305)
T ss_dssp EEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHH
Confidence 578999997 3334556889999999888888888765
No 36
>4g68_A ABC transporter; transport protein; HET: XYS; 1.80A {Caldanaerobius} PDB: 4g68_B*
Probab=42.27 E-value=26 Score=29.90 Aligned_cols=29 Identities=14% Similarity=0.200 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEG 108 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g 108 (265)
..++..+++..+...++|+||++++|++-
T Consensus 425 ~~~~~~~~~~~~~G~~t~eea~~~~q~~i 453 (456)
T 4g68_A 425 AQTHKDLVAQLFAKQITPEEYSKQMQQKI 453 (456)
T ss_dssp HHHHHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 34677888888888899999999999864
No 37
>3i3v_A Probable secreted solute-binding lipoprotein; transporter, PSI-II, structural genomics, protein structure initiative; 2.30A {Streptomyces coelicolor}
Probab=41.86 E-value=23 Score=29.15 Aligned_cols=31 Identities=10% Similarity=0.094 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAK 110 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~k 110 (265)
..++..+++.++...++|+||++++|+...+
T Consensus 366 ~~~~~~~~~~~~~g~~t~e~a~~~~~~~~~~ 396 (405)
T 3i3v_A 366 AQPLITATSTSFTRGTSPARVRAALESAYRS 396 (405)
T ss_dssp HHHHHHHHHHHHSTTCCHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHhhC
Confidence 4678888999999999999999999876543
No 38
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=41.13 E-value=16 Score=30.22 Aligned_cols=37 Identities=22% Similarity=0.318 Sum_probs=27.9
Q ss_pred eeeccCCceee------ee-eecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTVA------CG-VKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtlA------Ca-vKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
.+.|+||||=. -. ...|.+++---+-..-+|+||+++
T Consensus 73 ~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~ 116 (261)
T 4gek_A 73 QVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHI 116 (261)
T ss_dssp EEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHH
Confidence 68999998732 11 235788888888888899888775
No 39
>4b6i_A SMA2266; signaling protein; 1.95A {Serratia marcescens}
Probab=40.32 E-value=5.1 Score=31.58 Aligned_cols=26 Identities=23% Similarity=0.620 Sum_probs=17.9
Q ss_pred HHHHHHhcc----ccc-cccCceeeeeeecc
Q 024641 25 EKCRQLVGE----DAS-SQSGKFTILNCFDM 50 (265)
Q Consensus 25 EK~R~LVGe----e~s-SkSGkFT~~nCFDm 50 (265)
++.|+||-+ +.. +..++|++|+|+||
T Consensus 57 ~~~~~Li~kyl~~~y~~~~g~~~~llKCldl 87 (102)
T 4b6i_A 57 EQGEKLAEQYANKNSQGSVQGTYHTLDCLSL 87 (102)
T ss_dssp HHHHHHHHHHHTTCCCCSSSSCCHHHHHHGG
T ss_pred HHHHHHHHHHHHhccCCCCCchhHHHHHHHh
Confidence 456666653 333 33489999999998
No 40
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=40.30 E-value=13 Score=27.25 Aligned_cols=37 Identities=11% Similarity=0.076 Sum_probs=26.2
Q ss_pred eeeccCCcee---eeeeecc-eEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEG-VKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEG-VKLY~ynIRs~hvE~~R~~A 82 (265)
..+|+|||+= ....+.+ .+++..-+-..-++.+|+++
T Consensus 34 ~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~ 74 (177)
T 2esr_A 34 RVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNI 74 (177)
T ss_dssp EEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH
T ss_pred eEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHH
Confidence 5789999871 1223445 58999999888888877765
No 41
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=39.87 E-value=19 Score=25.89 Aligned_cols=37 Identities=19% Similarity=0.340 Sum_probs=26.3
Q ss_pred eeeccCCceeeee---eec--ceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTVACG---VKE--GVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtlACa---vKE--GVKLY~ynIRs~hvE~~R~~A 82 (265)
...|+|||+=..+ .+. +.+++..-|-...++.+|+++
T Consensus 28 ~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~ 69 (178)
T 3hm2_A 28 TLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNA 69 (178)
T ss_dssp EEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHH
T ss_pred eEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHH
Confidence 5789999863222 233 788999999888888777764
No 42
>4hs7_A Bacterial extracellular solute-binding protein, P; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: P33; 2.60A {Staphylococcus aureus subsp}
Probab=39.85 E-value=45 Score=27.75 Aligned_cols=32 Identities=19% Similarity=0.242 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAK 113 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAK 113 (265)
.++..++.. +..|.+|++|.++|+++..+.-|
T Consensus 377 ~~~~~~~~~-v~~g~~~~~al~~a~~~i~~~ik 408 (420)
T 4hs7_A 377 EPMGNASIF-ISNGKNPKQALDEATNDITQNIK 408 (420)
T ss_dssp HHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHH
Confidence 356666654 55789999999999988777654
No 43
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=39.82 E-value=14 Score=27.28 Aligned_cols=37 Identities=22% Similarity=0.274 Sum_probs=25.8
Q ss_pred eeeccCCcee----eeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV----ACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl----ACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
...|+|||+= .++-+-+.+++...+-...++.+|+++
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~ 86 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNI 86 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHH
Confidence 6789999872 222223778888888888777777654
No 44
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=39.64 E-value=47 Score=26.55 Aligned_cols=53 Identities=15% Similarity=0.162 Sum_probs=34.1
Q ss_pred HHHHHHHhccccccccCceeeeeeeccCCce-eeee--eecce-EEEEeechhHHHHHHHHHH
Q 024641 24 AEKCRQLVGEDASSQSGKFTILNCFDMGSGT-VACG--VKEGV-KLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 24 AEK~R~LVGee~sSkSGkFT~~nCFDmgsGt-lACa--vKEGV-KLY~ynIRs~hvE~~R~~A 82 (265)
.++.++++.. +...=....|+|||+ +.|. .+.|. +++---+=..-++.+|+++
T Consensus 42 ~~~~~~~~~~------~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~ 98 (263)
T 2a14_A 42 LECLHKTFGP------GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWL 98 (263)
T ss_dssp HHHHHHHHST------TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHhcC------CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHH
Confidence 4555666532 222235678999999 3443 36676 4888888777788887764
No 45
>2vgq_A Maltose-binding periplasmic protein, mitochondrial antiviral-signaling protein; immune system/transport, IPS1/MAVS/VISA/cardif; HET: MTT; 2.1A {Escherichia coli}
Probab=38.97 E-value=94 Score=26.99 Aligned_cols=50 Identities=26% Similarity=0.205 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchh
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWD 132 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWD 132 (265)
.++..++++++...++|++|++++|+...++.+... .-+-+.|-+...-|
T Consensus 356 ~~~~~~~~~~~~G~~t~~~al~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~ 405 (477)
T 2vgq_A 356 YAVRTAVINAASGRQTVDEALKDAQTNSAMAFAEDK--TYKYICRNFSNFCN 405 (477)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHH--HHHHHHHTGGGGTT
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhhhh--HHHHHHhccccccc
Confidence 457788888888889999999999998877655322 11255565555444
No 46
>3k01_A Acarbose/maltose binding protein GACH; ABC transporter, acarbose-binding protein, transport protein; 1.35A {Streptomyces glaucescens} PDB: 3jzj_A* 3k00_A* 3k02_A*
Probab=38.84 E-value=41 Score=27.85 Aligned_cols=31 Identities=23% Similarity=0.192 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 111 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 111 (265)
.++..++++++...+++++|.+++|+...+.
T Consensus 377 ~~~~~~~~~~~~g~~~~~~al~~~~~~~~~~ 407 (412)
T 3k01_A 377 EPIRLQMANVLSGETSPDEAAANTGDAYRKL 407 (412)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 4688889999998999999999998876554
No 47
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=38.17 E-value=18 Score=26.42 Aligned_cols=37 Identities=14% Similarity=0.281 Sum_probs=25.0
Q ss_pred eeeccCCceee---eeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTVA---CGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtlA---CavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
+..|+|||+=. ...+.|.+++...+-...++.+|+++
T Consensus 35 ~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~ 74 (199)
T 2xvm_A 35 KTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIK 74 (199)
T ss_dssp EEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred eEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Confidence 67899998621 12234778888888777777766553
No 48
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=37.95 E-value=19 Score=25.97 Aligned_cols=37 Identities=16% Similarity=0.174 Sum_probs=25.6
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
.+.|+|||+= ....+.+.+++..-+-...++.+|+++
T Consensus 55 ~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~ 94 (194)
T 1dus_A 55 DILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENI 94 (194)
T ss_dssp EEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHH
T ss_pred eEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHH
Confidence 5789999861 112233788898888888777777654
No 49
>4gqo_A LMO0859 protein; virulence, pathogenesis, vaccine candidate, center for struc genomics of infectious diseases, csgid, niaid; HET: MSE PGE; 2.10A {Listeria monocytogenes}
Probab=37.95 E-value=44 Score=27.68 Aligned_cols=34 Identities=12% Similarity=0.012 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 024641 78 ARNVAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 111 (265)
Q Consensus 78 ~R~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 111 (265)
..+...+.+++..+...++|++|++++|++.++.
T Consensus 397 ~~~~~~~~~~~~~~~G~~t~~~al~~~~~~~~~~ 430 (433)
T 4gqo_A 397 IQQIIGEEAWNPIVRGEKKPTKAWSDMKKAEDGV 430 (433)
T ss_dssp HHHHHHHHTHHHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 3333445677788888899999999998877654
No 50
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=37.87 E-value=21 Score=25.64 Aligned_cols=37 Identities=14% Similarity=0.093 Sum_probs=25.2
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
.+.|+|||+= ....+.+.+++..-+-...++.+|+++
T Consensus 36 ~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~ 75 (192)
T 1l3i_A 36 VAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNL 75 (192)
T ss_dssp EEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHH
Confidence 6789999872 122344578888888777777776654
No 51
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=37.74 E-value=18 Score=26.99 Aligned_cols=38 Identities=11% Similarity=0.191 Sum_probs=25.1
Q ss_pred eeeccCCce--eee-eeecce-EEEEeechhHHHHHHHHHHH
Q 024641 46 NCFDMGSGT--VAC-GVKEGV-KLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 46 nCFDmgsGt--lAC-avKEGV-KLY~ynIRs~hvE~~R~~A~ 83 (265)
.+.|+|||| ++. ..+.+. +++..-|-...++.+|+.+-
T Consensus 47 ~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~ 88 (189)
T 3p9n_A 47 AVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIE 88 (189)
T ss_dssp EEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHH
T ss_pred EEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHH
Confidence 578999887 332 233444 68888887777777776653
No 52
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=37.32 E-value=38 Score=30.03 Aligned_cols=30 Identities=30% Similarity=0.306 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAK 110 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~k 110 (265)
.+++.++++++....++++|.++||+..+.
T Consensus 341 ~~~~~~~~~~~~G~~~~~~al~~a~~~~~~ 370 (694)
T 3dm0_A 341 YAVRTAVINAASGRQTVDAALAAAQTNAAA 370 (694)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHhhhc
Confidence 478889999999889999999999987543
No 53
>3quf_A Extracellular solute-binding protein, family 1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Bifidobacterium longum subsp}
Probab=37.22 E-value=24 Score=29.13 Aligned_cols=31 Identities=19% Similarity=0.090 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAK 110 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~k 110 (265)
+.++..++++.+...++++||++++|+.-++
T Consensus 380 ~~~~~~~~~~~~~G~~t~e~al~~~~~~~~~ 410 (414)
T 3quf_A 380 STEGIAQQQKIVQGQISAKDAAKALDAKWAT 410 (414)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHhHHHHhCCCCHHHHHHHHHHHHHH
Confidence 3567889999999999999999988876544
No 54
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=37.19 E-value=21 Score=26.58 Aligned_cols=37 Identities=16% Similarity=0.235 Sum_probs=22.4
Q ss_pred eeeccCCcee------eeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV------ACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl------ACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
.+.|+|||+= +-..+...+++..-|-...++.+|+++
T Consensus 25 ~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 67 (197)
T 3eey_A 25 TVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKL 67 (197)
T ss_dssp EEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 6889999972 111112347777777766666665543
No 55
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=36.63 E-value=64 Score=27.54 Aligned_cols=35 Identities=31% Similarity=0.284 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKL 114 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKl 114 (265)
..++..++.+++...+++++|.+.++++.+.+..+
T Consensus 340 ~~~~~~~~~~~~~G~~~~eeal~~~~~~~~~i~~~ 374 (449)
T 3iot_A 340 WYAVRTAVINAASGRQTVDAALAAAQTNAAAMATL 374 (449)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhh
Confidence 34788899999999999999999999998887754
No 56
>3oo8_A ABC transporter binding protein ACBH; class 2 SBP fold, ABC transporter extracellular solute bindi protein, D-galactose binding; 1.60A {Actinoplanes} PDB: 3oo6_A* 3oo7_A 3oo9_A 3ooa_A
Probab=36.35 E-value=30 Score=28.57 Aligned_cols=30 Identities=17% Similarity=0.147 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhcC--CChHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQG--LSSNDAAKQAQKEGAK 110 (265)
Q Consensus 81 ~A~e~AL~da~~qG--ls~~eaAk~Aqk~g~k 110 (265)
.++..++++.+... +++++|.+++|++.++
T Consensus 381 ~~~~~~~~~~~~g~~~~t~~~al~~~~~~~~~ 412 (415)
T 3oo8_A 381 NAMIKLIQQFIDQPTPETIATVQKSAEDQAKT 412 (415)
T ss_dssp HHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcCCHHHHHHHHHHHHHH
Confidence 67888899999988 8999998888876543
No 57
>1elj_A Maltodextrin-binding protein; protein-carbohydrate complex, maltose binding protein, MBP fold, ABC transporter fold, thermophilic protein; HET: CME GLC; 1.85A {Pyrococcus furiosus} SCOP: c.94.1.1
Probab=36.34 E-value=48 Score=27.17 Aligned_cols=30 Identities=17% Similarity=0.141 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhcCCC--hHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLS--SNDAAKQAQKEGAK 110 (265)
Q Consensus 81 ~A~e~AL~da~~qGls--~~eaAk~Aqk~g~k 110 (265)
.++..++++++...++ +++|.+++|++..+
T Consensus 346 ~~~~~~~~~~~~g~~~~~~~~al~~~~~~~~~ 377 (381)
T 1elj_A 346 GGVDGAINEILQDPQNADIEGILKKYQQEILN 377 (381)
T ss_dssp HHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCccHHHHHHHHHHHHHH
Confidence 4577888888888899 99999999887554
No 58
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=36.12 E-value=66 Score=26.84 Aligned_cols=61 Identities=11% Similarity=0.015 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhhhhcCccce
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIYYGGTITE 145 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEalYyGGt~tE 145 (265)
.+.-.++...+.+|+++.||++.|......|-+.+...-+ || -.-|.+|-+.|++=-.+-|
T Consensus 215 D~fsaai~a~l~~g~~l~~A~~~A~~~~~~ai~~~~~~~~---g~-~~~Gv~~e~~L~~l~~~~~ 275 (282)
T 3h74_A 215 DTLAAVIAGLLGRGYPLAPTLARANQWLNMAVAETIAQNR---TD-DRQGVALGDLLQAILALNE 275 (282)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTC---SC-TTSCCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHhhCCC---Cc-hhcCCcHHHHHHHHHhhcc
Confidence 5778899999999999999999999888888777654321 33 2456666666665333333
No 59
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=35.67 E-value=18 Score=30.21 Aligned_cols=45 Identities=20% Similarity=0.236 Sum_probs=32.5
Q ss_pred cccCceeeeeeeccCCceeeee-eecceEEEEeechhHHHHHHHHHHH
Q 024641 37 SQSGKFTILNCFDMGSGTVACG-VKEGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 37 SkSGkFT~~nCFDmgsGtlACa-vKEGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
++.|. +++++| +||||++-+ .+.|-+.+-.-|-...++.+|+|+.
T Consensus 233 ~~~~~-~vlD~f-~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 233 SFVGD-VVLDPF-AGTGTTLIAAARWGRRALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp CCTTC-EEEETT-CTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCC-EEEECC-CCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHH
Confidence 34444 677766 677776544 3568889999999999999988854
No 60
>1r6z_P Chimera of maltose-binding periplasmic protein AN argonaute 2; deviant OB fold, RNAI, gene regulation; HET: MAL; 2.80A {Escherichia coli} SCOP: b.34.14.1 c.94.1.1
Probab=35.49 E-value=12 Score=32.87 Aligned_cols=53 Identities=23% Similarity=0.208 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhh
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAI 137 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEal 137 (265)
.++..++++++...++++||++++|+...++.+. ...|.+.=|+ ...||+...
T Consensus 342 ~~~~~~~~~~~~G~~t~~eal~~~~~~~~~~l~~--~~~~~~~~~~--p~~~~~~~~ 394 (509)
T 1r6z_P 342 YAVRTAVINAASGRQTVDEALKDAQTNAAAEFVD--ISHKSFPISM--PMIEYLERF 394 (509)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHCCCCC--SSCCCSSCEE--EHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh--hhhhccCCCc--cHHHHHHHH
Confidence 4678888888988899999999999887655432 2234454454 455777654
No 61
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=35.43 E-value=23 Score=26.95 Aligned_cols=39 Identities=13% Similarity=0.109 Sum_probs=28.2
Q ss_pred eeeccCCcee------eeeeecceEEEEeechhHHHHHHHHHHHH
Q 024641 46 NCFDMGSGTV------ACGVKEGVKLYFYNIRAAHVERARNVAIE 84 (265)
Q Consensus 46 nCFDmgsGtl------ACavKEGVKLY~ynIRs~hvE~~R~~A~e 84 (265)
++.|+|||+= +-....+.+++..-+-...++.+|+++-+
T Consensus 67 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~ 111 (225)
T 3tr6_A 67 KVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEK 111 (225)
T ss_dssp EEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred EEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 6889999861 21222378999999998888888876543
No 62
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=35.03 E-value=22 Score=27.42 Aligned_cols=39 Identities=13% Similarity=0.144 Sum_probs=28.1
Q ss_pred eeeccCCce--eee----eeecceEEEEeechhHHHHHHHHHHHH
Q 024641 46 NCFDMGSGT--VAC----GVKEGVKLYFYNIRAAHVERARNVAIE 84 (265)
Q Consensus 46 nCFDmgsGt--lAC----avKEGVKLY~ynIRs~hvE~~R~~A~e 84 (265)
++.|+|||+ ++. ..+.+.+++.--+-...++.+|+.+-.
T Consensus 61 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~ 105 (221)
T 3u81_A 61 LVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNF 105 (221)
T ss_dssp EEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHH
Confidence 689999986 222 224578999999988888888776543
No 63
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=35.01 E-value=65 Score=27.81 Aligned_cols=40 Identities=38% Similarity=0.466 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHhcCCCh-------------------HHHHHHHHHHHHHHHHHHHHHhhh
Q 024641 80 NVAIEKAVVDALSQGLSS-------------------NDAAKQAQKEGAKAAKLAKRQAKR 121 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~-------------------~eaAk~Aqk~g~kAAKlA~rQAkR 121 (265)
-.+||+|+.++ .-|++| +|-+|+|.+.+.+| |.|-|.+||
T Consensus 99 i~~IekAI~~S-~LglnP~~dG~~Iri~iP~LTeErRkelvK~ak~~~E~a-KvaIRniRr 157 (209)
T 4gfq_A 99 IGDIEKAILKA-DLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEA-KVAVRNVRR 157 (209)
T ss_dssp HHHHHHHHHHH-TSSCCCEECSSCEEEECCBCCHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCCCCcCCCceeeeCCCccHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 46889999987 567776 47888888887764 888888887
No 64
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=34.98 E-value=15 Score=35.37 Aligned_cols=55 Identities=18% Similarity=0.264 Sum_probs=44.6
Q ss_pred CceeeeeeeccCCceeeeeeecceEEEEeechhHHHHHHHHHHHHHHHHHHHhcCC
Q 024641 40 GKFTILNCFDMGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGL 95 (265)
Q Consensus 40 GkFT~~nCFDmgsGtlACavKEGVKLY~ynIRs~hvE~~R~~A~e~AL~da~~qGl 95 (265)
-|-.|+-+=-||+|--.+..+.|..+++||+....+++++++ +++.|...+..|.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~-i~~~l~~~~~~G~ 369 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAE-AAKLLVGRVDKGR 369 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH-HHHHHHHHHTTTS
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHH-HHHHHHHHHhcCC
Confidence 355666666677766677788899999999999999998888 6888888888884
No 65
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=34.95 E-value=22 Score=28.09 Aligned_cols=37 Identities=22% Similarity=0.252 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAK 116 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~ 116 (265)
=.+.-.++.-++.+|+++.||++.|...+..+.+.+.
T Consensus 209 GD~f~a~~~~~l~~g~~~~~a~~~a~~~~~~~~~~~~ 245 (258)
T 1ub0_A 209 GCTLSAAIAALLAKGRPLAEAVAEAKAYLTRALKTAP 245 (258)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhh
Confidence 3567788999999999999999999887777665543
No 66
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=34.43 E-value=16 Score=29.51 Aligned_cols=39 Identities=26% Similarity=0.313 Sum_probs=29.2
Q ss_pred eeeccCCce--ee-eeeecceEEEEeechhHHHHHHHHHHHH
Q 024641 46 NCFDMGSGT--VA-CGVKEGVKLYFYNIRAAHVERARNVAIE 84 (265)
Q Consensus 46 nCFDmgsGt--lA-CavKEGVKLY~ynIRs~hvE~~R~~A~e 84 (265)
...|+|||| ++ ...|.|.+++..-|-...++.+|+++-.
T Consensus 123 ~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~ 164 (254)
T 2nxc_A 123 KVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKR 164 (254)
T ss_dssp EEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHH
T ss_pred EEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHH
Confidence 578999987 21 2345677999999999989988877643
No 67
>2qbx_A Ephrin type-B receptor 2; receptor tyrosine kinase, BI-directional signaling, tumorigenesis, angiogenesis, signaling protein, structural genomics; 2.30A {Homo sapiens}
Probab=34.34 E-value=16 Score=31.82 Aligned_cols=28 Identities=36% Similarity=0.769 Sum_probs=24.0
Q ss_pred ceeeeeeeccCCceeeeeeecceEEEEeec
Q 024641 41 KFTILNCFDMGSGTVACGVKEGVKLYFYNI 70 (265)
Q Consensus 41 kFT~~nCFDmgsGtlACavKEGVKLY~ynI 70 (265)
|||+.+|.++.-+...| ||--.||.|.-
T Consensus 103 ~FTvRDC~s~p~~~~sC--KETFnLyY~Es 130 (208)
T 2qbx_A 103 KFSVRDCSSIPSVPGSC--KETFNLYYYEA 130 (208)
T ss_dssp EEEECCGGGSTTCCTTC--BCCEEEEEEEE
T ss_pred EEEeeccccCCCCCCcc--cCEeEEEEEEc
Confidence 79999999998777777 89999998853
No 68
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=33.82 E-value=18 Score=26.07 Aligned_cols=36 Identities=17% Similarity=0.226 Sum_probs=25.0
Q ss_pred eeeccCCce---eeeeeecceEEEEeechhHHHHHHHHH
Q 024641 46 NCFDMGSGT---VACGVKEGVKLYFYNIRAAHVERARNV 81 (265)
Q Consensus 46 nCFDmgsGt---lACavKEGVKLY~ynIRs~hvE~~R~~ 81 (265)
..+|+|||+ .....+.|.+++...+-...++.+|++
T Consensus 49 ~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~ 87 (195)
T 3cgg_A 49 KILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQD 87 (195)
T ss_dssp EEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred eEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHh
Confidence 678999986 222334477888888887777777654
No 69
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=33.74 E-value=42 Score=27.75 Aligned_cols=63 Identities=10% Similarity=0.132 Sum_probs=41.3
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCccce
Q 024641 82 AIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTITE 145 (265)
Q Consensus 82 A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~tE 145 (265)
++.+.+.+...+.++..+..+.| +.++..|+..-+++=+.+|-.|+.-...| |.+++||.+..
T Consensus 217 ~l~~~~~~~~~~~~~~~~i~~~a-~~gd~~a~~il~~~~~~La~~i~~l~~~l~p~~IvlgG~i~~ 281 (327)
T 2ap1_A 217 GFAWLYQHYYDQSLQAPEIIALW-EQGDEQAHAHVERYLDLLAVCLGNILTIVDPDLLVIGGGLSN 281 (327)
T ss_dssp HHHHHHHHHHCCCCCHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGG
T ss_pred HHHHHHHHhcCCCCCHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeChhhc
Confidence 34433333333345565555544 56788888888888888888887665554 67888888764
No 70
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=33.72 E-value=20 Score=27.65 Aligned_cols=38 Identities=21% Similarity=0.132 Sum_probs=27.9
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
.+.|+|||+= ....+.|.+++..-|-..-++.+|+++-
T Consensus 81 ~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~ 121 (241)
T 3gdh_A 81 VVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAE 121 (241)
T ss_dssp EEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred EEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHH
Confidence 5789999972 2233567888888888888888777654
No 71
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=33.59 E-value=26 Score=26.43 Aligned_cols=37 Identities=11% Similarity=0.163 Sum_probs=24.9
Q ss_pred eeeccCCceee---eeeecc--eEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTVA---CGVKEG--VKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtlA---CavKEG--VKLY~ynIRs~hvE~~R~~A 82 (265)
.+.|+|||+=. ...+.+ .+++..-+-..-++.+|+++
T Consensus 43 ~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~ 84 (204)
T 3e05_A 43 VMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNL 84 (204)
T ss_dssp EEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHH
Confidence 57899998621 123444 78888888877777776654
No 72
>1hsj_A Fusion protein consisting of staphylococcus accessary regulator protein R and maltose...; novel fold for DNA binding; HET: GLC; 2.30A {Escherichia coli} SCOP: a.4.5.28 c.94.1.1
Probab=33.50 E-value=20 Score=30.91 Aligned_cols=60 Identities=22% Similarity=0.154 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH----------HHHHHhhhhhcchh------hcchhhhhhhhhc
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAK----------LAKRQAKRIIGPII------AAGWDFFEAIYYG 140 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAK----------lA~rQAkRI~GPii------ssgWDfFEalYyG 140 (265)
.++..++++++...++|++|++++|+...++.+ .+.++.++++-+++ ..-|.++..|+--
T Consensus 341 ~~~~~~~~~~~~G~~t~~eal~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lt~~q~~vl~~l~~~ 416 (487)
T 1hsj_A 341 YAVRTAVINAASGRQTVDEALAAAQTNAAAEFMSKINDINDLVNATFQVKKFFRDTKKKFNLNYEEIYILNHILRS 416 (487)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHTCCCCCCCCSHHHHHHHHHHHHHHHHHHSSSCCCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhC
Confidence 467788888888889999999999988654221 23444444444443 3447777777654
No 73
>3uor_A ABC transporter sugar binding protein; ALFA/beta protein, periplasmic-binding protein, maltose, SUG binding protein; 2.20A {Xanthomonas axonopodis PV}
Probab=33.19 E-value=50 Score=28.23 Aligned_cols=34 Identities=9% Similarity=0.072 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAK 113 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAK 113 (265)
+.++..++++.+...+++++|.+++|+...++-+
T Consensus 381 ~~~~~~~~~~~~~G~~t~~~al~~~~~~~~~~l~ 414 (458)
T 3uor_A 381 VQEMRLVTERVVRGGQSHDAAVQELDQRVDEILA 414 (458)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 3478889999999999999999999998877644
No 74
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=32.73 E-value=18 Score=30.91 Aligned_cols=53 Identities=13% Similarity=0.118 Sum_probs=37.9
Q ss_pred HHHHHhccccccccCceeeeeeeccCCceeeeee-ecceEEEEeechhHHHHHHHHHH
Q 024641 26 KCRQLVGEDASSQSGKFTILNCFDMGSGTVACGV-KEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 26 K~R~LVGee~sSkSGkFT~~nCFDmgsGtlACav-KEGVKLY~ynIRs~hvE~~R~~A 82 (265)
-.+.++ +.+|+.| .+++++| +||||.+-++ +.|-+-+-.-|-...++.++.|.
T Consensus 241 l~~~~i--~~~~~~~-~~VlDpF-~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~ 294 (323)
T 1boo_A 241 LPEFFI--RMLTEPD-DLVVDIF-GGSNTTGLVAERESRKWISFEMKPEYVAASAFRF 294 (323)
T ss_dssp HHHHHH--HHHCCTT-CEEEETT-CTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGG
T ss_pred HHHHHH--HHhCCCC-CEEEECC-CCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHH
Confidence 344444 3345555 4789998 8999876554 55888888888888888888774
No 75
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=32.51 E-value=25 Score=26.97 Aligned_cols=38 Identities=11% Similarity=0.006 Sum_probs=26.7
Q ss_pred eeeeccCCcee---eeeeecceEEEEeechhHHHHHHHHHH
Q 024641 45 LNCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 45 ~nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
..+.|+|||+= ....+.|.+++..-|-..-++.+|+++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~ 108 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETY 108 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHH
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHh
Confidence 47899999972 222456788888888777777776643
No 76
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=32.47 E-value=18 Score=28.32 Aligned_cols=39 Identities=13% Similarity=0.148 Sum_probs=27.6
Q ss_pred eeeccCCce--ee-eeee--cceEEEEeechhHHHHHHHHHHHH
Q 024641 46 NCFDMGSGT--VA-CGVK--EGVKLYFYNIRAAHVERARNVAIE 84 (265)
Q Consensus 46 nCFDmgsGt--lA-CavK--EGVKLY~ynIRs~hvE~~R~~A~e 84 (265)
.+.|+|||| ++ ...+ .+.+++..-|-...++.+|+.+-.
T Consensus 68 ~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~ 111 (254)
T 2h00_A 68 RGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQ 111 (254)
T ss_dssp EEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHH
T ss_pred EEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHH
Confidence 578999997 22 1222 257899999988888888877654
No 77
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=32.12 E-value=72 Score=26.70 Aligned_cols=52 Identities=17% Similarity=0.059 Sum_probs=40.7
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhhh
Q 024641 82 AIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIY 138 (265)
Q Consensus 82 A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEalY 138 (265)
..-.++.-.+.+|.+ -+|+..|...-.+|+.+|.++++ ||= +---|+++.||
T Consensus 196 ~Lsg~iaa~lA~g~~-~~Aa~~a~~~~~~Ag~~a~~~~~---g~g-~~~~~l~d~l~ 247 (265)
T 1v8a_A 196 MVAALTGAFVAVTEP-LKATTSALVTFGIAAEKAYEEAK---YPG-SFHVKLYDWLY 247 (265)
T ss_dssp HHHHHHHHHHTTSCH-HHHHHHHHHHHHHHHHHHHHHCC---SHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHHHHhCC---CCc-hHHHHHHHHHH
Confidence 457788888999999 99999999888889888877653 552 22368888887
No 78
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=31.63 E-value=37 Score=28.25 Aligned_cols=64 Identities=20% Similarity=0.259 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCccc
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTIT 144 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~t 144 (265)
..++.+.+.....+.+++.+..+.| +.++..|+..-+++=+.+|-.|+.-...| |.++.||.+.
T Consensus 183 ~~~l~~~~~~~~~~~~~~~~i~~~a-~~gd~~a~~~~~~~~~~l~~~i~~l~~~~~p~~ivlgG~i~ 248 (302)
T 3vov_A 183 GRALERDATYAFQRPVDTRELFRLF-QAGDPKAERLVLQAARYVGIGLASLVKAFDPGVVVLGGGVA 248 (302)
T ss_dssp HHHHHHHHHHHHTSCCCHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESHHH
T ss_pred HHHHHHHHHHhhCCCCCHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeChhH
Confidence 3455555555555667777766555 45788888888888888888887766555 6788888876
No 79
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=31.62 E-value=20 Score=27.95 Aligned_cols=39 Identities=23% Similarity=0.298 Sum_probs=28.1
Q ss_pred eeeccCCce--eeee--eecceEEEEeechhHHHHHHHHHHHH
Q 024641 46 NCFDMGSGT--VACG--VKEGVKLYFYNIRAAHVERARNVAIE 84 (265)
Q Consensus 46 nCFDmgsGt--lACa--vKEGVKLY~ynIRs~hvE~~R~~A~e 84 (265)
...|+|||+ ++.. -+-+.+++...+-...++.+|+++-+
T Consensus 64 ~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~ 106 (273)
T 3bus_A 64 RVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATA 106 (273)
T ss_dssp EEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHh
Confidence 678999986 2222 22378899999988888888877643
No 80
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=31.37 E-value=26 Score=27.74 Aligned_cols=38 Identities=18% Similarity=0.151 Sum_probs=28.7
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
...|+||||= ....+.|.+++.--|-...++.+|+++.
T Consensus 60 ~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~ 100 (293)
T 3thr_A 60 RVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERW 100 (293)
T ss_dssp EEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhh
Confidence 5789999982 2234567788888888888888887654
No 81
>2wo1_A Ephrin type-A receptor; glycoprotein, AXON guidance, vascular development, cell SURF receptor, transferase, cell signaling; 1.85A {Homo sapiens} PDB: 2wo2_A* 2wo3_A* 3ckh_A 3gxu_A 3nru_A
Probab=31.22 E-value=18 Score=30.91 Aligned_cols=28 Identities=36% Similarity=0.730 Sum_probs=24.1
Q ss_pred ceeeeeeeccCCceeeeeeecceEEEEeec
Q 024641 41 KFTILNCFDMGSGTVACGVKEGVKLYFYNI 70 (265)
Q Consensus 41 kFT~~nCFDmgsGtlACavKEGVKLY~ynI 70 (265)
+||+.+|.++.-+...| ||--.||.|.-
T Consensus 76 ~FtvRdC~s~p~~~~sC--KETFnLyy~es 103 (185)
T 2wo1_A 76 KFTLRDCNSLPGVMGTC--KETFNLYYYES 103 (185)
T ss_dssp EEEECCGGGSTTCTTTC--CSEEEEEEEEE
T ss_pred EEEEeccccCCCCCCcc--cCEeEEEEEEc
Confidence 79999999998776677 89999999864
No 82
>2bba_A Ephrin type-B receptor 4; EPHB4, tumorigenesis, angiogenesis, peptide mimetics, signal protein, structural genomics, PSI-2; 1.65A {Homo sapiens} SCOP: b.18.1.4 PDB: 2hle_A
Probab=31.16 E-value=20 Score=30.63 Aligned_cols=28 Identities=29% Similarity=0.826 Sum_probs=23.6
Q ss_pred ceeeeeeeccCCceeeeeeecceEEEEeec
Q 024641 41 KFTILNCFDMGSGTVACGVKEGVKLYFYNI 70 (265)
Q Consensus 41 kFT~~nCFDmgsGtlACavKEGVKLY~ynI 70 (265)
|||+-+|.++.-+...| ||--.||.|.-
T Consensus 80 ~Ft~RdC~s~p~~~~sC--KETFnLyy~es 107 (185)
T 2bba_A 80 RFTMLECLSLPRAGRSC--KETFTVFYYES 107 (185)
T ss_dssp EEEEBCGGGSTTCCTTC--CSEEEEEEEEE
T ss_pred EEEeeccccCCCCCCcC--cCEeEEEEEEc
Confidence 79999999998766667 89999998853
No 83
>3cay_A LPD-12; alpha helix, acyl chains, detergent, amphiphilic, lipopeptide, SELF-assembling peptide, de novo protein; HET: O12 LMT; 1.20A {Synthetic} PDB: 3cba_A*
Probab=31.12 E-value=40 Score=21.32 Aligned_cols=15 Identities=53% Similarity=0.488 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHH
Q 024641 99 DAAKQAQKEGAKAAK 113 (265)
Q Consensus 99 eaAk~Aqk~g~kAAK 113 (265)
.|||.|.....||||
T Consensus 9 kaakyaaeaaekaak 23 (27)
T 3cay_A 9 KAAKYAAEAAEKAAK 23 (27)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 345555555555555
No 84
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=31.09 E-value=22 Score=27.46 Aligned_cols=39 Identities=21% Similarity=0.221 Sum_probs=29.5
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNVAIE 84 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~A~e 84 (265)
...|+|||+= ....+.|.+++..-+-...++.+|+++-+
T Consensus 44 ~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~ 85 (252)
T 1wzn_A 44 RVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKE 85 (252)
T ss_dssp EEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHh
Confidence 5789999872 22335588999999999999999887644
No 85
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=31.06 E-value=23 Score=27.30 Aligned_cols=38 Identities=13% Similarity=0.286 Sum_probs=25.7
Q ss_pred eeeccCCce--eee-eeecc-eEEEEeechhHHHHHHHHHHH
Q 024641 46 NCFDMGSGT--VAC-GVKEG-VKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 46 nCFDmgsGt--lAC-avKEG-VKLY~ynIRs~hvE~~R~~A~ 83 (265)
.+.|+|||| ++. ..+.| .+++..-+-..-++.+|+.+-
T Consensus 56 ~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~ 97 (201)
T 2ift_A 56 ECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQ 97 (201)
T ss_dssp EEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHH
T ss_pred eEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHH
Confidence 578998886 333 24455 478888887777777776653
No 86
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=30.90 E-value=28 Score=27.07 Aligned_cols=38 Identities=18% Similarity=0.212 Sum_probs=26.2
Q ss_pred eeeccCCce--ee--ee--eecceEEEEeechhHHHHHHHHHHH
Q 024641 46 NCFDMGSGT--VA--CG--VKEGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 46 nCFDmgsGt--lA--Ca--vKEGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
.+.|+|||+ ++ ++ +..+.+++...+....++.+|+.+-
T Consensus 96 ~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~ 139 (255)
T 3mb5_A 96 FIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIK 139 (255)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHH
Confidence 577888886 22 11 1236899999998888888776653
No 87
>1urs_A Maltose-binding protein; maltodextrin-binding protein, acidophIle, thermoacidophIle, hyperthermophIle, thermophIle; HET: MLR; 1.45A {Alicyclobacillus acidocaldarius} SCOP: c.94.1.1 PDB: 1urg_A* 1urd_A*
Probab=30.85 E-value=31 Score=28.59 Aligned_cols=31 Identities=16% Similarity=0.163 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 112 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 112 (265)
.++.. |++++...+++++|++++|++..+..
T Consensus 367 ~~~~~-~~~~~~g~~~~~~al~~~~~~~~~~l 397 (402)
T 1urs_A 367 QAMSI-LQNIIAGKVSPEQGAKDFVQNIQKGI 397 (402)
T ss_dssp HHTTH-HHHHHHTSSCHHHHHHHHHHHHHC--
T ss_pred HHHHH-HHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 45666 88888888999999999998765543
No 88
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=30.82 E-value=22 Score=26.61 Aligned_cols=37 Identities=19% Similarity=0.219 Sum_probs=25.5
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
...|+|||+= ....+.+-+++...|-...++.+|+++
T Consensus 41 ~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~ 80 (227)
T 1ve3_A 41 KVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYA 80 (227)
T ss_dssp EEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred eEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHH
Confidence 6789999872 122344558888888887777777654
No 89
>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*
Probab=30.51 E-value=49 Score=28.40 Aligned_cols=28 Identities=32% Similarity=0.330 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEG 108 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g 108 (265)
.++..+|++++...+++++|++++|+..
T Consensus 339 ~~~~~~~~~~~~G~~t~~~al~~~~~~~ 366 (461)
T 3csg_A 339 YAVRTAVINAASGRQTVDEALKDAQTRI 366 (461)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHhh
Confidence 4677888888888899999988887754
No 90
>2fe0_A SMP-1, small myristoylated protein 1; beta sheet, protein transport, membrane protein; NMR {Leishmania major} SCOP: b.134.1.1
Probab=30.25 E-value=37 Score=27.58 Aligned_cols=27 Identities=19% Similarity=0.320 Sum_probs=23.1
Q ss_pred eeeeeeccCCceeeeeee-cceEEEEee
Q 024641 43 TILNCFDMGSGTVACGVK-EGVKLYFYN 69 (265)
Q Consensus 43 T~~nCFDmgsGtlACavK-EGVKLY~yn 69 (265)
.+..|||=|.|-|.+.|. ++-+.+|||
T Consensus 30 ~v~~cF~~~nGlLfRIv~~~~~~WaFYN 57 (136)
T 2fe0_A 30 EVTKGFEKDNGLLFRIVNKKKKQWAYYN 57 (136)
T ss_dssp EEEESSSSTTCSEEEEEETTTTEEEEEE
T ss_pred EEEEcccCCCcEEEEEEecCCCEEEEEe
Confidence 468899988899999985 777899998
No 91
>1y60_A Formaldehyde-activating enzyme FAE; pentamer, beta-alpha-beta LEFT handed crossover, tetrahydromethanopterin-binding, lyase; HET: H4M; 1.90A {Methylobacterium extorquens} SCOP: d.14.1.12 PDB: 1y5y_A*
Probab=29.76 E-value=59 Score=27.76 Aligned_cols=42 Identities=31% Similarity=0.389 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHH------------------HHHHHHHHHHHHHHHHHh
Q 024641 78 ARNVAIEKAVVDALSQGLSSNDAA------------------KQAQKEGAKAAKLAKRQA 119 (265)
Q Consensus 78 ~R~~A~e~AL~da~~qGls~~eaA------------------k~Aqk~g~kAAKlA~rQA 119 (265)
.=|.|+-+|..|++.+|.=|+|-+ +.-++---.|+|+|-+.|
T Consensus 85 paQ~avA~AVaD~V~eG~iP~~~a~dl~Iiv~Vfi~p~a~D~~kiy~~NY~ATKlAI~RA 144 (169)
T 1y60_A 85 PAQHGVAMAVQDAVAEGIIPADEADDLYVLVGVFIHWEAADDAKIQKYNYEATKLSIQRA 144 (169)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTTGGGEEEEEEECCCTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCChhhcCcEEEEEEeecCccccCHHHHHHHHHHHHHHHHHHH
Confidence 358999999999999998776654 445566667888887665
No 92
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=29.66 E-value=23 Score=28.16 Aligned_cols=37 Identities=11% Similarity=0.135 Sum_probs=25.1
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
...|+|||+= ....+.|.+++..-+-...++.+|+++
T Consensus 123 ~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~ 162 (286)
T 3m70_A 123 KVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETK 162 (286)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred cEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Confidence 5789999972 223345778888888777777666543
No 93
>3c8x_A Ephrin type-A receptor 2; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; 1.95A {Homo sapiens} PDB: 3skj_E 3czu_A* 3hei_A 3hpn_A
Probab=29.65 E-value=24 Score=30.67 Aligned_cols=28 Identities=36% Similarity=0.765 Sum_probs=24.0
Q ss_pred ceeeeeeeccCCceeeeeeecceEEEEeec
Q 024641 41 KFTILNCFDMGSGTVACGVKEGVKLYFYNI 70 (265)
Q Consensus 41 kFT~~nCFDmgsGtlACavKEGVKLY~ynI 70 (265)
|||+.+|.++..+...| ||--.||.|.-
T Consensus 103 ~FTvRdC~s~p~~~~sC--KETFnLyy~es 130 (206)
T 3c8x_A 103 KFTVRDCNSFPGGASSC--KETFNLYYAES 130 (206)
T ss_dssp EEEEECGGGSTTCCTTC--BSCEEEEEEEE
T ss_pred EEEEeccccCCCCCCcC--cCEeEEEEEEc
Confidence 79999999998876677 89999999853
No 94
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=29.61 E-value=20 Score=26.62 Aligned_cols=37 Identities=19% Similarity=0.188 Sum_probs=27.3
Q ss_pred eeeeccCCceee---eeeecceEEEEeechhHHHHHHHHH
Q 024641 45 LNCFDMGSGTVA---CGVKEGVKLYFYNIRAAHVERARNV 81 (265)
Q Consensus 45 ~nCFDmgsGtlA---CavKEGVKLY~ynIRs~hvE~~R~~ 81 (265)
...+|+|||+=. ...+.|.+++...|-...++.+|++
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~ 93 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA 93 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT
T ss_pred CEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh
Confidence 468899999721 1234488999999988888888776
No 95
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=29.55 E-value=31 Score=27.53 Aligned_cols=35 Identities=23% Similarity=0.201 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLA 115 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA 115 (265)
.+.-.++.-++.+|+++.||++.|...+..+.+.+
T Consensus 216 D~f~a~~~~~l~~g~~~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 216 CTFSAAVTAELAKGAEVKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 56778899999999999999999988877777654
No 96
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=28.83 E-value=61 Score=27.00 Aligned_cols=51 Identities=24% Similarity=0.246 Sum_probs=37.8
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCccce
Q 024641 94 GLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTITE 145 (265)
Q Consensus 94 Gls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~tE 145 (265)
.+++.+-.+. .+.++..|+..-+++=+.+|-.|+.-...| |.++.||.+..
T Consensus 220 ~~~~~~i~~~-a~~gD~~a~~~~~~~~~~La~~i~~l~~~ldP~~IvlgG~i~~ 272 (321)
T 3r8e_A 220 ELSPKVIADH-AAQGDALALAVWADIGTIIGESLVNIVRVMDLNNILLGGGISG 272 (321)
T ss_dssp SCCHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEESGGGG
T ss_pred cCCHHHHHHH-HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeChhcc
Confidence 4455555544 456888888889999999988888766655 67888888764
No 97
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=28.72 E-value=29 Score=26.11 Aligned_cols=37 Identities=14% Similarity=0.119 Sum_probs=25.4
Q ss_pred eeeeccCCcee---eeeeecceEEEEeechhHHHHHHHHH
Q 024641 45 LNCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNV 81 (265)
Q Consensus 45 ~nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~ 81 (265)
....|+|||+= ....+.+.+++..-|-..-++.+|++
T Consensus 53 ~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~ 92 (216)
T 3ofk_A 53 SNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQR 92 (216)
T ss_dssp EEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHH
T ss_pred CcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh
Confidence 56789999972 22345567888888877767666654
No 98
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=28.53 E-value=48 Score=27.13 Aligned_cols=37 Identities=8% Similarity=0.161 Sum_probs=27.7
Q ss_pred eeeccCCceee---eeeecce-EEEEeec-hhHHHHHHHHHH
Q 024641 46 NCFDMGSGTVA---CGVKEGV-KLYFYNI-RAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtlA---CavKEGV-KLY~ynI-Rs~hvE~~R~~A 82 (265)
.+.|+||||=. +..+.|. +++..-| -...++.+|+.+
T Consensus 82 ~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~ 123 (281)
T 3bzb_A 82 TVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNI 123 (281)
T ss_dssp EEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHH
T ss_pred eEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHH
Confidence 68999999632 3345676 8899998 678888888776
No 99
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=28.25 E-value=65 Score=27.07 Aligned_cols=64 Identities=11% Similarity=0.098 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCccce
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTITE 145 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~tE 145 (265)
+++.+.+.....+.+++.+-.+.| +.++..|+..-+++-+.+|-.|+.-...| |.++.||.+..
T Consensus 216 ~al~~~~~~~~~~~~~~~~i~~~a-~~gD~~a~~~~~~~~~~La~~i~~l~~~l~p~~IvlgGgi~~ 281 (327)
T 4db3_A 216 RGFELLYAHYYGEEKKAIDIIKAN-AAGDEKAAEHVERFMELLAICFGNIFTANDPHVVALGGGLSN 281 (327)
T ss_dssp HHHHHHHHHHHSCCCCHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGG
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCcccc
Confidence 345554444445567777766554 46788888888888888888887665544 67888887764
No 100
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=28.12 E-value=1.2e+02 Score=25.02 Aligned_cols=37 Identities=8% Similarity=-0.011 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKR 117 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~r 117 (265)
.+.-.++..++.+|+++.||++.|......+-+.+.+
T Consensus 226 D~f~a~~~~~l~~g~~~~~A~~~A~~~~~~~i~~t~~ 262 (289)
T 3pzs_A 226 DLTSGLLLVNLLKGEPLDKALEHVTAAVYEVMLKTQE 262 (289)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5778899999999999999999999888887777655
No 101
>3py7_A Maltose-binding periplasmic protein,paxillin LD1, chimera; viral protein; HET: MLR; 2.29A {Escherichia coli}
Probab=27.95 E-value=58 Score=28.77 Aligned_cols=32 Identities=28% Similarity=0.242 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 111 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 111 (265)
+.++..++.+++...++|+||.++++++-.+.
T Consensus 341 ~~~~~~~i~~~~~G~~t~eeal~~~~~~~~~i 372 (523)
T 3py7_A 341 WYAVRTAVINAASGRQTVDAALAAAQTNAAAM 372 (523)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhh
Confidence 35788999999999999999999999887764
No 102
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=27.94 E-value=29 Score=26.05 Aligned_cols=37 Identities=11% Similarity=0.108 Sum_probs=27.3
Q ss_pred eeeccCCceee---eeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTVA---CGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtlA---CavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
..+|+|||+=. ...+.|.+++...+-...++.+|+++
T Consensus 46 ~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~ 85 (211)
T 3e23_A 46 KILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL 85 (211)
T ss_dssp EEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred cEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc
Confidence 57899999722 12345789999999888888888765
No 103
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=27.90 E-value=27 Score=27.54 Aligned_cols=37 Identities=24% Similarity=0.466 Sum_probs=25.9
Q ss_pred eeeccCCce--eeeee-e---cceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGT--VACGV-K---EGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGt--lACav-K---EGVKLY~ynIRs~hvE~~R~~A 82 (265)
.+.|+|||+ ++... + .+.+++..-+....++.+|+.+
T Consensus 102 ~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~ 144 (280)
T 1i9g_A 102 RVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNV 144 (280)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHH
T ss_pred EEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHH
Confidence 578888875 22221 2 3678999999988888877654
No 104
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=27.83 E-value=28 Score=30.80 Aligned_cols=39 Identities=18% Similarity=0.217 Sum_probs=30.1
Q ss_pred eeeccCCcee----eeeee-cceEEEEeechhHHHHHHHHHHHH
Q 024641 46 NCFDMGSGTV----ACGVK-EGVKLYFYNIRAAHVERARNVAIE 84 (265)
Q Consensus 46 nCFDmgsGtl----ACavK-EGVKLY~ynIRs~hvE~~R~~A~e 84 (265)
...|+|||+. .|..+ -|.+++...|-..-+++||+++-+
T Consensus 125 rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~ 168 (298)
T 3fpf_A 125 RAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEG 168 (298)
T ss_dssp EEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHH
T ss_pred EEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHh
Confidence 5689999974 23333 588999999999999999887643
No 105
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=27.79 E-value=34 Score=27.32 Aligned_cols=39 Identities=18% Similarity=0.124 Sum_probs=28.0
Q ss_pred eeeeccCCcee------eeeeecceEEEEeechhHHHHHHHHHHH
Q 024641 45 LNCFDMGSGTV------ACGVKEGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 45 ~nCFDmgsGtl------ACavKEGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
.++.|+|||+= +-....+.+++..-+-...++.+|+++-
T Consensus 65 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~ 109 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQ 109 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 36889999872 2222237899999998888888887653
No 106
>3osq_A Maltose-binding periplasmic protein, green fluore protein; engineered protein, sensor protein, fluorescent protein, MBP maltose sensor; HET: C12 MAL; 1.90A {Escherichia coli}
Probab=27.75 E-value=49 Score=31.41 Aligned_cols=34 Identities=26% Similarity=0.269 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAK 113 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAK 113 (265)
+.++..++.+++....++++|.++||++-.++.+
T Consensus 622 ~~~l~~~l~~vl~G~~~peeAL~~a~~~i~~~i~ 655 (661)
T 3osq_A 622 WYAVRTAVINAASGRQTVDEDLKDAQTRITKGSH 655 (661)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578889999999999999999999988777655
No 107
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=27.67 E-value=33 Score=25.70 Aligned_cols=38 Identities=21% Similarity=0.198 Sum_probs=26.0
Q ss_pred eeeccCCceee---eeeecc---eEEEEeechhHHHHHHHHHHH
Q 024641 46 NCFDMGSGTVA---CGVKEG---VKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 46 nCFDmgsGtlA---CavKEG---VKLY~ynIRs~hvE~~R~~A~ 83 (265)
...|+|||+=. ...+.+ .+++...+-...++.+|+++-
T Consensus 40 ~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 83 (219)
T 3dh0_A 40 TVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVN 83 (219)
T ss_dssp EEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHH
Confidence 57899998721 123333 688888888887877776653
No 108
>1d8w_A L-rhamnose isomerase; beta-alpha-8-barrels, aldose-ketose isomerization, hydride shift; 1.60A {Escherichia coli} SCOP: c.1.15.2 PDB: 1de5_A* 1de6_A*
Probab=27.62 E-value=52 Score=31.58 Aligned_cols=56 Identities=29% Similarity=0.491 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh
Q 024641 72 AAHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF 134 (265)
Q Consensus 72 s~hvE~~R~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF 134 (265)
++-|--+| ++++||..|+ |-|.++-|+||.+++--..+|...--+-+ | +.+.||-|
T Consensus 343 ~A~vig~r--n~qkAll~AL---L~p~~~L~~~q~~gD~~~~lal~Ee~k~~-P-~~avwd~~ 398 (426)
T 1d8w_A 343 AAWVIGTR--NMKKALLRAL---LEPTAELRKLEAPGDYTARLALLEEQKSL-P-WQAVWEMY 398 (426)
T ss_dssp HHHHHHHH--HHHHHHHHHH---TSCHHHHHHHHTTTCHHHHHHHHHHHTTS-C-HHHHHHHH
T ss_pred HHHHHHHH--HHHHHHHHHH---CCCHHHHHHHHHcCCHHHHHHHHHHHhcC-C-hHHHHHHH
Confidence 44455544 5788888888 67999999999999998888876544333 2 56778866
No 109
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=27.53 E-value=23 Score=27.16 Aligned_cols=37 Identities=22% Similarity=0.242 Sum_probs=27.1
Q ss_pred eeeccCCceeee---eeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTVAC---GVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtlAC---avKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
.+.|+|||+=.- ..+.+.+++...+-...++.+|+++
T Consensus 42 ~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~ 81 (263)
T 2yqz_A 42 VFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI 81 (263)
T ss_dssp EEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT
T ss_pred EEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence 678999987221 2345788888888888888888765
No 110
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=27.53 E-value=25 Score=26.84 Aligned_cols=37 Identities=24% Similarity=0.292 Sum_probs=24.5
Q ss_pred eeeccCCc-e--eee-eeec-ceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSG-T--VAC-GVKE-GVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsG-t--lAC-avKE-GVKLY~ynIRs~hvE~~R~~A 82 (265)
.+.|+||| + ++. ..+. +.+++..-|-..-++.+|+.+
T Consensus 58 ~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~ 99 (230)
T 3evz_A 58 VALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNI 99 (230)
T ss_dssp EEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHH
T ss_pred EEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHH
Confidence 68899999 4 222 2233 677888888777677666554
No 111
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=27.51 E-value=29 Score=26.76 Aligned_cols=37 Identities=11% Similarity=0.161 Sum_probs=25.7
Q ss_pred eeeccCCce--eee-eeecce-EEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGT--VAC-GVKEGV-KLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGt--lAC-avKEGV-KLY~ynIRs~hvE~~R~~A 82 (265)
...|+|||| ++. ..+.|. +++..-|-...++.+|+.+
T Consensus 57 ~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~ 97 (202)
T 2fpo_A 57 QCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNL 97 (202)
T ss_dssp EEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHH
T ss_pred eEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHH
Confidence 567888886 333 245564 7888888888777777665
No 112
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=27.47 E-value=96 Score=26.05 Aligned_cols=39 Identities=26% Similarity=0.350 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHhcCCCh-------------------HHHHHHHHHHHHHHHHHHHHHhhh
Q 024641 80 NVAIEKAVVDALSQGLSS-------------------NDAAKQAQKEGAKAAKLAKRQAKR 121 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~-------------------~eaAk~Aqk~g~kAAKlA~rQAkR 121 (265)
-.+||+|+.+ .-|++| +|-+|+|.+.+.+ ||.|-|..||
T Consensus 78 i~~IekAI~~--dLglnP~~dG~~Iri~iP~lTeErRkelvK~~k~~~E~-aKvaiRniRr 135 (184)
T 1ge9_A 78 VPAIEKAIRE--ELNLNPTVQGNVIRVTLPPLTEERRRELVRLLHKITEE-ARVRVRNVRR 135 (184)
T ss_dssp HHHHHHHHHH--HHCSCCEEETTEEEEECCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHh--CCCCCcccCCCEEEEeCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 4689999998 778876 4677777776655 4677777776
No 113
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=27.37 E-value=37 Score=25.81 Aligned_cols=38 Identities=16% Similarity=0.177 Sum_probs=27.4
Q ss_pred eeeccCCcee--ee-eee---cceEEEEeechhHHHHHHHHHHH
Q 024641 46 NCFDMGSGTV--AC-GVK---EGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 46 nCFDmgsGtl--AC-avK---EGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
++.|+|||+= ++ ..+ .+.+++..-+-...++.+|+++-
T Consensus 61 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~ 104 (223)
T 3duw_A 61 NILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIE 104 (223)
T ss_dssp EEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 6889999862 11 122 26799999998888888887654
No 114
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=27.03 E-value=14 Score=35.59 Aligned_cols=52 Identities=13% Similarity=0.208 Sum_probs=37.9
Q ss_pred eeeeeeeccCCceeeeeeecceEEEEeechhHHHHHHHHHHHHHHHHHHHhcC
Q 024641 42 FTILNCFDMGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQG 94 (265)
Q Consensus 42 FT~~nCFDmgsGtlACavKEGVKLY~ynIRs~hvE~~R~~A~e~AL~da~~qG 94 (265)
-.|+-+=-||+|--.+..+.|..+.+||+....+++++++ +++.|...+..|
T Consensus 315 V~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~-i~~~l~~~~~~G 366 (725)
T 2wtb_A 315 VAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGR-VKANLQSRVRKG 366 (725)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHH-HHHHHHHTTC--
T ss_pred EEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHH-HHHHHHHHHhcC
Confidence 3444444455555566778899999999999999999887 678887777776
No 115
>3p1i_A Ephrin type-B receptor 3; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; 2.10A {Homo sapiens}
Probab=27.03 E-value=27 Score=30.42 Aligned_cols=28 Identities=32% Similarity=0.715 Sum_probs=24.5
Q ss_pred ceeeeeeeccCCceeeeeeecceEEEEeec
Q 024641 41 KFTILNCFDMGSGTVACGVKEGVKLYFYNI 70 (265)
Q Consensus 41 kFT~~nCFDmgsGtlACavKEGVKLY~ynI 70 (265)
|||+.+|-++..+...| ||=-.||.|.-
T Consensus 99 ~FTvRDC~s~p~~~~sC--KETFnLyY~Es 126 (200)
T 3p1i_A 99 KFTVRDCNSIPNIPGSC--KETFNLFYYEA 126 (200)
T ss_dssp EEEEBCGGGSTTCCTTC--BCCEEEEEEEE
T ss_pred EEeeccccccCCCCCcc--cceeEEEEEec
Confidence 79999999998888878 89999998863
No 116
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=26.89 E-value=15 Score=31.81 Aligned_cols=54 Identities=19% Similarity=0.246 Sum_probs=41.4
Q ss_pred CceeeeeeeccCCceeeeeeecceEEEEeechhHHHHHHHHHHHHHHHHHHHhcC
Q 024641 40 GKFTILNCFDMGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQG 94 (265)
Q Consensus 40 GkFT~~nCFDmgsGtlACavKEGVKLY~ynIRs~hvE~~R~~A~e~AL~da~~qG 94 (265)
-|..|+-+==||++--.+..+.|.++++|++....+++++++ +++.|...+..|
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~-i~~~l~~l~~~G 60 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALEN-IRKEMKSLQQSG 60 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHH-HHHHHHHHHHTT
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-HHHHHHHHHHcC
Confidence 456666565666666677788899999999999999998765 566777777766
No 117
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=26.83 E-value=49 Score=28.46 Aligned_cols=30 Identities=30% Similarity=0.271 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGA 109 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~ 109 (265)
..++..++.+++...++++||.+++++...
T Consensus 340 ~~~~~~~~~~~~~g~~~~~~al~~~~~~~~ 369 (581)
T 3o3u_N 340 WYAVRTAVINAASGRQTVDAALAAAQTNAA 369 (581)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 457889999999999999999998877544
No 118
>3p14_A L-rhamnose isomerase; TIM barrel; 2.51A {Bacillus halodurans} SCOP: c.1.15.2 PDB: 3uu0_A 3uva_A 3uxi_A
Probab=26.70 E-value=70 Score=30.38 Aligned_cols=48 Identities=23% Similarity=0.260 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHH-hhhhhcchhhcchhhh
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQ-AKRIIGPIIAAGWDFF 134 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQ-AkRI~GPiissgWDfF 134 (265)
|++++||..|+- -+.++.++||.+++--..+|... .|-. -+.+.||-|
T Consensus 348 r~~qka~~~AlL---~~~~~L~~~q~~~D~~~~l~~~ee~k~~---p~~~vw~~~ 396 (424)
T 3p14_A 348 RNVIKALLFAML---IPHKQLKEWQETGDYTRRLAVLEEFKTY---PLGAIWNEY 396 (424)
T ss_dssp HHHHHHHHHHHT---SCHHHHHHHHHTTCHHHHHHHHHHGGGS---SHHHHHHHH
T ss_pred HHHHHHHHHHHc---CCHHHHHHHHHcCCHHHHHHHHHHHhcC---ChHHHHHHH
Confidence 345777777775 68999999999999999999854 4432 357788866
No 119
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=26.67 E-value=35 Score=26.78 Aligned_cols=40 Identities=13% Similarity=-0.007 Sum_probs=29.0
Q ss_pred eeeeccCCce--eeee-eec----ceEEEEeechhHHHHHHHHHHHH
Q 024641 45 LNCFDMGSGT--VACG-VKE----GVKLYFYNIRAAHVERARNVAIE 84 (265)
Q Consensus 45 ~nCFDmgsGt--lACa-vKE----GVKLY~ynIRs~hvE~~R~~A~e 84 (265)
..+.|+|||| ++.. .+. +.+++..-|-...++.+|+.+..
T Consensus 53 ~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~ 99 (250)
T 1o9g_A 53 VTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLAL 99 (250)
T ss_dssp EEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHT
T ss_pred CeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHH
Confidence 4678999886 2222 222 67899999999999999877654
No 120
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=26.60 E-value=16 Score=28.02 Aligned_cols=37 Identities=22% Similarity=0.195 Sum_probs=26.6
Q ss_pred eeeccCCce--eeee-eec-ceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGT--VACG-VKE-GVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGt--lACa-vKE-GVKLY~ynIRs~hvE~~R~~A 82 (265)
...|+|||+ ++.. .+. +.+++...|-...++.+|+++
T Consensus 58 ~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~ 98 (266)
T 3ujc_A 58 KVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERV 98 (266)
T ss_dssp EEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTC
T ss_pred EEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Confidence 678999986 2222 222 788899999888888888764
No 121
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=26.48 E-value=24 Score=33.58 Aligned_cols=31 Identities=29% Similarity=0.293 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 111 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 111 (265)
.++..++.+++...++++||.++||++....
T Consensus 345 ~~~~~~l~~v~~G~~t~eeAl~~a~~~~~~~ 375 (805)
T 2nvu_B 345 YAVRTAVINAASGRQTVDAALAAAQTNAAAD 375 (805)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHhhhc
Confidence 4777888888888899999999998876543
No 122
>1mh3_A Maltose binding-A1 homeodomain protein chimera; MATA1, binding cooperativity, maltose binding protein, MBP, sugar binding, DNA binding protein; 2.10A {Escherichia coli} SCOP: a.4.1.1 c.94.1.1 PDB: 1mh4_A 1le8_A
Probab=26.34 E-value=49 Score=27.54 Aligned_cols=31 Identities=32% Similarity=0.312 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 111 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 111 (265)
.++..++.+++...+++.+|.+++++....+
T Consensus 341 ~~~~~~~~~~~~G~~t~~~al~~~~~~~~~~ 371 (421)
T 1mh3_A 341 YAVRTAVINAASGRQTVDAALAAAQTAAAAA 371 (421)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhccccChhhhhhhhhhhhhhh
Confidence 5678888888988899999999988876544
No 123
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=26.11 E-value=25 Score=26.33 Aligned_cols=37 Identities=19% Similarity=0.243 Sum_probs=26.2
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
...|+|||+= ....+.|.+++..-|-...++.+|+++
T Consensus 33 ~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~ 72 (235)
T 3sm3_A 33 EILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAA 72 (235)
T ss_dssp EEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHT
T ss_pred eEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence 5789999972 222344788998888888777777654
No 124
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=26.04 E-value=28 Score=26.12 Aligned_cols=37 Identities=14% Similarity=0.026 Sum_probs=24.8
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
.+.|+|||+= ....+.+.+++..-|-...++.+|+++
T Consensus 80 ~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~ 119 (210)
T 3lbf_A 80 RVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRL 119 (210)
T ss_dssp EEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHH
T ss_pred EEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHH
Confidence 5889999972 122344778888888777666666553
No 125
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=26.00 E-value=41 Score=25.52 Aligned_cols=37 Identities=16% Similarity=0.172 Sum_probs=26.2
Q ss_pred eeeccCCceee------eeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTVA------CGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtlA------CavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
++.|+|||+=. -...++.+++.--|-...++.+|+++
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~ 101 (210)
T 3c3p_A 59 LVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRML 101 (210)
T ss_dssp EEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence 68899998621 12233778999998888887777654
No 126
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=25.79 E-value=31 Score=27.65 Aligned_cols=37 Identities=19% Similarity=0.287 Sum_probs=25.5
Q ss_pred eeeccCCce--ee--eee--ecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGT--VA--CGV--KEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGt--lA--Cav--KEGVKLY~ynIRs~hvE~~R~~A 82 (265)
.+.|+|||+ ++ ++- ..+.+++..-+....++.+|+.+
T Consensus 115 ~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~ 157 (277)
T 1o54_A 115 RIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNL 157 (277)
T ss_dssp EEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHH
T ss_pred EEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHH
Confidence 578888876 22 221 22678999999988888777654
No 127
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=25.76 E-value=28 Score=27.56 Aligned_cols=37 Identities=14% Similarity=0.165 Sum_probs=26.5
Q ss_pred eeeccCCcee--e--eeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV--A--CGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl--A--CavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
...|+|||+= + .+-+-|.+++...+-...++.+|+++
T Consensus 67 ~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~ 107 (287)
T 1kpg_A 67 TLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLV 107 (287)
T ss_dssp EEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHH
Confidence 5789999862 2 22244778888888888888887664
No 128
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=25.32 E-value=47 Score=26.00 Aligned_cols=57 Identities=23% Similarity=0.313 Sum_probs=35.9
Q ss_pred HHHHHHHhccccccccCceeeeeeeccCCceee---eeeec--ceEEEEeechhHHHHHHHHHHHH
Q 024641 24 AEKCRQLVGEDASSQSGKFTILNCFDMGSGTVA---CGVKE--GVKLYFYNIRAAHVERARNVAIE 84 (265)
Q Consensus 24 AEK~R~LVGee~sSkSGkFT~~nCFDmgsGtlA---CavKE--GVKLY~ynIRs~hvE~~R~~A~e 84 (265)
++...+++.....-+.|+ .+.|+|||+=. ...+. +.+++...+-...++.+|+++-.
T Consensus 22 ~~~l~~~l~~~~~~~~~~----~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 83 (276)
T 3mgg_A 22 AETLEKLLHHDTVYPPGA----KVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEK 83 (276)
T ss_dssp -CHHHHHHHTTCCCCTTC----EEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccCCCCC----eEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 444555555444434443 68999998721 11223 67888889988888888877644
No 129
>3etp_A Ephrin type-B receptor 2; EPH receptor, tyrosine kinase, alternative splicing, ATP- binding, glycoprotein, kinase, membrane, nucleotide- binding; 2.00A {Mus musculus} SCOP: b.18.1.4 PDB: 1nuk_A 1kgy_A 1shw_B*
Probab=25.13 E-value=29 Score=29.80 Aligned_cols=28 Identities=36% Similarity=0.769 Sum_probs=24.4
Q ss_pred ceeeeeeeccCCceeeeeeecceEEEEeec
Q 024641 41 KFTILNCFDMGSGTVACGVKEGVKLYFYNI 70 (265)
Q Consensus 41 kFT~~nCFDmgsGtlACavKEGVKLY~ynI 70 (265)
|||+.+|-++..+...| ||=-.||.|.-
T Consensus 79 ~FtvRdC~s~p~~~~sC--KETFnLyy~es 106 (187)
T 3etp_A 79 KFSVRDCSSIPSVPGSC--KETFNLYYYEA 106 (187)
T ss_dssp EEEECCGGGSTTCCTTC--CCEEEEEEEEE
T ss_pred EEeeccccccCCCCCcc--cceeeEEEEec
Confidence 79999999998887778 89999998863
No 130
>3mp6_A MBP, SGF29, maltose-binding periplasmic protein, linker, SAGA associated factor 29; histone, tudor domain, histone binding protei; HET: MLY MAL; 1.48A {Escherichia coli} PDB: 3mp1_A* 3mp8_A*
Probab=24.98 E-value=72 Score=28.33 Aligned_cols=28 Identities=29% Similarity=0.291 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKE 107 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~ 107 (265)
+.++..++.+++...+++++|++++++.
T Consensus 341 ~~~~~~~l~~v~~G~~t~eeAl~~~~~~ 368 (522)
T 3mp6_A 341 WYAVRTAVINAASGRQTVDEALAAAQTN 368 (522)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 3478889999999999999998888764
No 131
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=24.92 E-value=30 Score=26.37 Aligned_cols=36 Identities=17% Similarity=0.131 Sum_probs=23.6
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNV 81 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~ 81 (265)
...|+|||+= ....+.+.+++..-+-...++.+|++
T Consensus 73 ~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~ 111 (231)
T 1vbf_A 73 KVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKL 111 (231)
T ss_dssp EEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHH
T ss_pred EEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHH
Confidence 6789999862 22234456777777777666666654
No 132
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=24.81 E-value=32 Score=27.30 Aligned_cols=38 Identities=21% Similarity=0.366 Sum_probs=27.1
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
...|+|||+= ....+.|.+++..-|-...++.+|+++-
T Consensus 71 ~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~ 111 (285)
T 4htf_A 71 RVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAE 111 (285)
T ss_dssp EEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 5789999972 2223458888888888887777776643
No 133
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=24.73 E-value=30 Score=27.53 Aligned_cols=39 Identities=26% Similarity=0.343 Sum_probs=27.5
Q ss_pred eeeccCCcee--eee-eec-ceEEEEeechhHHHHHHHHHHHH
Q 024641 46 NCFDMGSGTV--ACG-VKE-GVKLYFYNIRAAHVERARNVAIE 84 (265)
Q Consensus 46 nCFDmgsGtl--ACa-vKE-GVKLY~ynIRs~hvE~~R~~A~e 84 (265)
...|+|||+= +.. .+. |.+++...|-...++.+|+++-+
T Consensus 85 ~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~ 127 (297)
T 2o57_A 85 KGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQ 127 (297)
T ss_dssp EEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHh
Confidence 5789999862 211 222 67888899988888888877644
No 134
>2apl_A Hypothetical protein PG0816; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG, U function; 2.01A {Porphyromonas gingivalis} SCOP: a.258.1.1
Probab=24.53 E-value=91 Score=26.37 Aligned_cols=30 Identities=33% Similarity=0.350 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 024641 78 ARNVAIEKAVVDALSQGLSSNDAAKQAQKE 107 (265)
Q Consensus 78 ~R~~A~e~AL~da~~qGls~~eaAk~Aqk~ 107 (265)
+|...--.|-.+|+.+|.|+.+|-..|-++
T Consensus 36 ~Rad~Aa~aYe~A~~~G~~~~~A~e~A~~v 65 (157)
T 2apl_A 36 ARSDEALTAYCDAVAQGFSHPEAESMASEV 65 (157)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 455556678899999999999988877654
No 135
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=24.41 E-value=24 Score=26.23 Aligned_cols=36 Identities=28% Similarity=0.198 Sum_probs=24.7
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNV 81 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~ 81 (265)
...|+|||+= ....+.|.+++...+-...++.+|++
T Consensus 44 ~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~ 82 (203)
T 3h2b_A 44 VILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQT 82 (203)
T ss_dssp CEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHH
T ss_pred eEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHh
Confidence 5789999972 12234477888888877777776654
No 136
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=24.31 E-value=28 Score=28.02 Aligned_cols=39 Identities=10% Similarity=0.086 Sum_probs=28.5
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNVAIE 84 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~A~e 84 (265)
...|+|||+= ....+.|.+++..-|-..-++.+|+++-+
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~ 126 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAE 126 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHT
T ss_pred cEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhh
Confidence 4689999972 23345588888888888888888877643
No 137
>3jtz_A Integrase; four stranded beta-sheet, DNA binding protein; 1.30A {Yersinia pestis} PDB: 3rmp_A
Probab=24.05 E-value=2.1e+02 Score=20.76 Aligned_cols=66 Identities=23% Similarity=0.301 Sum_probs=38.1
Q ss_pred hccHHHHHHHhccccccccCceeeeeeeccCCceeeeee-ecceEEEEeechh--------------HHHHHHHHHHHHH
Q 024641 21 SLTAEKCRQLVGEDASSQSGKFTILNCFDMGSGTVACGV-KEGVKLYFYNIRA--------------AHVERARNVAIEK 85 (265)
Q Consensus 21 S~tAEK~R~LVGee~sSkSGkFT~~nCFDmgsGtlACav-KEGVKLY~ynIRs--------------~hvE~~R~~A~e~ 85 (265)
.+|..+++.+-- +...+.+ .| |.| |..-| +.|.|.|++.-|- .=++.||++|.+
T Consensus 2 ~LT~~~i~~~kp-----~~k~~~~---~D-g~G-L~L~V~psG~K~w~~ryr~~Gk~~~~~LG~yp~~sL~~AR~~a~~- 70 (88)
T 3jtz_A 2 SLTDAKIRTLKP-----SDKPFKV---SD-SHG-LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREG- 70 (88)
T ss_dssp CCCHHHHHHCCC-----CSSCEEE---EC-STT-EEEEECTTSCEEEEEEEEETTEEEEEEEEETTTSCHHHHHHHHHH-
T ss_pred CCCHHHHhcCCC-----CCCcEEE---ec-CCc-eEEEEecCCCEEEEEEEEeCCeEEEEEeECCCCCCHHHHHHHHHH-
Confidence 357777777632 1223333 44 334 55555 5799999887762 236777777754
Q ss_pred HHHHHHhcCCChH
Q 024641 86 AVVDALSQGLSSN 98 (265)
Q Consensus 86 AL~da~~qGls~~ 98 (265)
+...+.+|..|+
T Consensus 71 -~r~~l~~Gidp~ 82 (88)
T 3jtz_A 71 -IRKMLALNINLE 82 (88)
T ss_dssp -HHHHHTCC----
T ss_pred -HHHHHHcCCCch
Confidence 567788888775
No 138
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=23.86 E-value=48 Score=25.52 Aligned_cols=37 Identities=16% Similarity=0.283 Sum_probs=25.5
Q ss_pred eeeccCCce--eeee-eec---ceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGT--VACG-VKE---GVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGt--lACa-vKE---GVKLY~ynIRs~hvE~~R~~A 82 (265)
...|+|||+ ++.. .+. +.+++..-+....++.+|+.+
T Consensus 99 ~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~ 141 (258)
T 2pwy_A 99 RVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNV 141 (258)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH
T ss_pred EEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHH
Confidence 577888886 2221 222 678999999888888877654
No 139
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=23.64 E-value=66 Score=28.42 Aligned_cols=32 Identities=28% Similarity=0.243 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 111 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 111 (265)
..++..++.+++...+++++|.+.+++..++.
T Consensus 340 ~~~~~~~i~~vl~G~~t~eeAl~~~~~~i~~e 371 (500)
T 3ob4_A 340 WYAVRTAVINAASGRQTVDAALAAAQTNAAAR 371 (500)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 35788999999999999999999998865443
No 140
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=23.33 E-value=37 Score=27.06 Aligned_cols=37 Identities=11% Similarity=0.256 Sum_probs=27.3
Q ss_pred eeeccCCce------eeeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGT------VACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGt------lACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
++.|+|||+ +|-+...+.+++.--+-...++.+|+..
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~ 101 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALF 101 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence 577999986 2222345789999999888888887764
No 141
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=23.24 E-value=44 Score=26.06 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=27.1
Q ss_pred eeeccCCcee---eeeee---cceEEEEeechhHHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVK---EGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 46 nCFDmgsGtl---ACavK---EGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
++.|+|||+= .+..+ .+.+++.--+-...++.+|++.-
T Consensus 63 ~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~ 106 (239)
T 2hnk_A 63 RIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWK 106 (239)
T ss_dssp EEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 6789999861 12222 26789999998888888887653
No 142
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=23.24 E-value=48 Score=26.50 Aligned_cols=38 Identities=11% Similarity=0.106 Sum_probs=26.3
Q ss_pred eeeeccCCceeee----eeecceEEEEeechhHHHHHHHHHH
Q 024641 45 LNCFDMGSGTVAC----GVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 45 ~nCFDmgsGtlAC----avKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
...+|+||||=.. +.+.+.+++.--|=..-++.+|+++
T Consensus 73 ~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~ 114 (289)
T 2g72_A 73 RTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWL 114 (289)
T ss_dssp SEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHH
T ss_pred CeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHH
Confidence 3678999998331 1223668888888777777777654
No 143
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=22.97 E-value=63 Score=24.73 Aligned_cols=38 Identities=13% Similarity=0.130 Sum_probs=26.9
Q ss_pred eeeeccCCceee---eeeecce-EEEEeechhHHHHHHHHHH
Q 024641 45 LNCFDMGSGTVA---CGVKEGV-KLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 45 ~nCFDmgsGtlA---CavKEGV-KLY~ynIRs~hvE~~R~~A 82 (265)
....|+|||+=. -..+.|. +++..-+-...++.+|+++
T Consensus 58 ~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~ 99 (265)
T 2i62_A 58 ELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWL 99 (265)
T ss_dssp EEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHH
Confidence 468999999721 1235565 7888888777788887765
No 144
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=22.95 E-value=42 Score=25.24 Aligned_cols=38 Identities=13% Similarity=0.106 Sum_probs=26.9
Q ss_pred eeeccCCcee--e-eeeecceEEEEeechhHHHHHHHHHHH
Q 024641 46 NCFDMGSGTV--A-CGVKEGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 46 nCFDmgsGtl--A-CavKEGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
...|+|||+= + ...+.|.+++...+-...++.+|+++-
T Consensus 40 ~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~ 80 (246)
T 1y8c_A 40 DYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFR 80 (246)
T ss_dssp EEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHH
T ss_pred eEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHh
Confidence 5789999872 1 233457788888888888888877653
No 145
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=22.78 E-value=1.3e+02 Score=24.51 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 112 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 112 (265)
.+.-.++..++.+|+++.+|++.|...++.+.
T Consensus 253 DaF~ag~~~~l~~g~~~~~a~~~A~a~aa~~v 284 (320)
T 3ie7_A 253 DVFVGAFIAGLAMNMPITETLKVATGCSASKV 284 (320)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 57888999999999999999998887665543
No 146
>2zxt_A Maltose-binding periplasmic protein, linker, MITO intermembrane space import AND...; disulfide bond, alpha helix, fusion, sugar transport; HET: MAL; 3.00A {Escherichia coli}
Probab=22.69 E-value=82 Score=27.52 Aligned_cols=28 Identities=32% Similarity=0.394 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEG 108 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g 108 (265)
.++..+|++++...+++++|++++|+..
T Consensus 341 ~~~~~~l~~~~~G~~t~~eal~~~~~~~ 368 (465)
T 2zxt_A 341 YAVRTAVINAASGRQTVDEALKDAQTNS 368 (465)
T ss_dssp HHHHHHHHHHHTSSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 4677888888888899999988887643
No 147
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=22.61 E-value=42 Score=26.32 Aligned_cols=37 Identities=8% Similarity=0.124 Sum_probs=26.2
Q ss_pred eeeccCCcee---eeeee--cceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVK--EGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl---ACavK--EGVKLY~ynIRs~hvE~~R~~A 82 (265)
++.|+|||+= .+..+ .+.+++..-|-...++.+|+++
T Consensus 74 ~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~ 115 (232)
T 3ntv_A 74 NILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNL 115 (232)
T ss_dssp EEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHH
T ss_pred EEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 6889999872 12223 4778898888887777777654
No 148
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=22.54 E-value=35 Score=25.62 Aligned_cols=37 Identities=19% Similarity=0.108 Sum_probs=23.7
Q ss_pred eeeeccCCceee---eeeecceEEEEeechhHHHHHHHHH
Q 024641 45 LNCFDMGSGTVA---CGVKEGVKLYFYNIRAAHVERARNV 81 (265)
Q Consensus 45 ~nCFDmgsGtlA---CavKEGVKLY~ynIRs~hvE~~R~~ 81 (265)
....|+|||+=. ...+.+.+++...+-...++.+|++
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~ 86 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEK 86 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred CeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHh
Confidence 357899998721 1233477888877776666665553
No 149
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=22.53 E-value=35 Score=27.87 Aligned_cols=39 Identities=21% Similarity=0.246 Sum_probs=27.6
Q ss_pred eeeccCCce--eee-eeec-ceEEEEeechhHHHHHHHHHHHH
Q 024641 46 NCFDMGSGT--VAC-GVKE-GVKLYFYNIRAAHVERARNVAIE 84 (265)
Q Consensus 46 nCFDmgsGt--lAC-avKE-GVKLY~ynIRs~hvE~~R~~A~e 84 (265)
..+|+|||+ ++. ..+. |.+++..-|-...++.+|+++-+
T Consensus 120 ~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~ 162 (312)
T 3vc1_A 120 TLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARE 162 (312)
T ss_dssp EEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHH
T ss_pred EEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH
Confidence 577999986 222 2233 78888888888888888877644
No 150
>3h4z_A Maltose-binding periplasmic protein fused with Al DERP7; MBP fusion, AHA1/BPI domain-like, super roll, sugar T transport, allergen; HET: GLC; 2.35A {Escherichia coli}
Probab=22.30 E-value=1.6e+02 Score=26.86 Aligned_cols=30 Identities=30% Similarity=0.271 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGA 109 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~ 109 (265)
..++..++.+++...+++++|.++++++.+
T Consensus 340 ~~~l~~~l~~vl~G~~~~eeAl~~~~~~~~ 369 (568)
T 3h4z_A 340 WYAVRTAVINAASGRQTVDAALAAAQTNAA 369 (568)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 357889999999999999999999999833
No 151
>3oyv_A Imelysin; outer membrane protein, extracellular active site, metal BIN protein, structural genomics; HET: MSE; 1.25A {Bacteroides ovatus atcc 8483} PDB: 3n8u_A*
Probab=22.21 E-value=1.9e+02 Score=26.13 Aligned_cols=71 Identities=17% Similarity=0.164 Sum_probs=49.4
Q ss_pred ecceEEEEee-chhHHHHHHH-HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhh-hcchhhcchhh
Q 024641 60 KEGVKLYFYN-IRAAHVERAR-NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRI-IGPIIAAGWDF 133 (265)
Q Consensus 60 KEGVKLY~yn-IRs~hvE~~R-~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI-~GPiissgWDf 133 (265)
++-+.=|+.+ |++.+-+.+. .+++..|+..-.. +|+++...+.+..-++|..+..|..-+ +||+...+|+.
T Consensus 227 ~~vl~~~ad~vi~P~Y~~l~~~a~~L~~a~~a~~a---~Pt~~~L~aar~Aw~~Ar~~w~~~E~frfGP~~~~~~~~ 300 (361)
T 3oyv_A 227 NPVVTQYVDAVVVPTYKSLKEKNDALYNAVIVLAD---NPSNSAFETACDAWITAREPWEKSEAFLFGPVDEMGLDP 300 (361)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH---SCCHHHHHHHHHHHHHHHHHHHTTGGGCCGGGGSTTHHH
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh---CCCHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHH
Confidence 3445556676 6777665442 3455666655443 477888888888889999999988764 69999877764
No 152
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=22.10 E-value=36 Score=25.63 Aligned_cols=37 Identities=14% Similarity=0.093 Sum_probs=23.8
Q ss_pred eeeccCCcee--e-eeeecc---eEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV--A-CGVKEG---VKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl--A-CavKEG---VKLY~ynIRs~hvE~~R~~A 82 (265)
...|+|||+= + ...+.+ .+++...+-...++.+|+++
T Consensus 80 ~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~ 122 (215)
T 2yxe_A 80 KVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTL 122 (215)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH
T ss_pred EEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHH
Confidence 6789999862 1 222333 67888887777777766654
No 153
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=22.02 E-value=1.4e+02 Score=24.26 Aligned_cols=32 Identities=19% Similarity=0.115 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 112 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 112 (265)
.+.-.++..++.+|+++.+|++.|...++.+.
T Consensus 273 Daf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v 304 (332)
T 2qcv_A 273 DSYASAFLYALISGKGIETALKYGSASASIVV 304 (332)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 57788999999999999999999987766554
No 154
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=21.86 E-value=45 Score=27.52 Aligned_cols=38 Identities=21% Similarity=0.391 Sum_probs=25.1
Q ss_pred eeeeccCCce-----e---eeeeecceEEEEeechhHHHHHHHHHH
Q 024641 45 LNCFDMGSGT-----V---ACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 45 ~nCFDmgsGt-----l---ACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
-...|+|||+ + +...-.+.++...-+=..-++.+|+++
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~ 124 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALL 124 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhc
Confidence 3567999998 2 222223567777777677788888775
No 155
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=21.71 E-value=1.3e+02 Score=24.57 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 111 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 111 (265)
.+.-.++..++.+|+++.+|++.|...++.+
T Consensus 262 Daf~ag~~~~l~~g~~~~~a~~~A~~~aa~~ 292 (325)
T 3h49_A 262 DNFASGFIAALLEGKNLRECARFANATAAIS 292 (325)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5788899999999999999999888765544
No 156
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=21.68 E-value=27 Score=25.71 Aligned_cols=36 Identities=14% Similarity=0.126 Sum_probs=21.0
Q ss_pred eeeccCCceee---eeeecce-EEEEeechhHHHHHHHHH
Q 024641 46 NCFDMGSGTVA---CGVKEGV-KLYFYNIRAAHVERARNV 81 (265)
Q Consensus 46 nCFDmgsGtlA---CavKEGV-KLY~ynIRs~hvE~~R~~ 81 (265)
...|+|||+=. ...+.|. +++..-|-...++.+|++
T Consensus 45 ~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~ 84 (215)
T 2pxx_A 45 RILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQAC 84 (215)
T ss_dssp CEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHH
T ss_pred eEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHh
Confidence 57899998721 1223344 677766666655555543
No 157
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=21.65 E-value=1.3e+02 Score=24.22 Aligned_cols=31 Identities=16% Similarity=0.161 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 111 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 111 (265)
.+.-.++..++.+|+++.+|++.|...++.+
T Consensus 256 D~f~a~~~~~l~~g~~~~~a~~~A~~~aa~~ 286 (309)
T 3umo_A 256 DSMVGAMTLKLAENASLEEMVRFGVAAGSAA 286 (309)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5788899999999999999999988655443
No 158
>3ju0_A Phage integrase; four stranded beta-sheet, DNA binding protein; 1.60A {Pectobacterium atrosepticum}
Probab=21.53 E-value=92 Score=23.64 Aligned_cols=67 Identities=18% Similarity=0.208 Sum_probs=43.9
Q ss_pred ccHHHHHHHhccccccccCceeeeeeeccCCceeeeeee-cceEEEEeechh--------------HHHHHHHHHHHHHH
Q 024641 22 LTAEKCRQLVGEDASSQSGKFTILNCFDMGSGTVACGVK-EGVKLYFYNIRA--------------AHVERARNVAIEKA 86 (265)
Q Consensus 22 ~tAEK~R~LVGee~sSkSGkFT~~nCFDmgsGtlACavK-EGVKLY~ynIRs--------------~hvE~~R~~A~e~A 86 (265)
+|..+++.+-- +...+.+.+. +-|.+-|. -|.|.|+|.-|. .=+..||.+|.+
T Consensus 3 LT~~~i~~~kp-----~~k~~~~~Dg-----~GL~L~V~psG~K~w~~rYr~~GK~~~~~LG~yp~~SLa~AR~~a~~-- 70 (108)
T 3ju0_A 3 LTDSKVKNAKS-----LEKEYKLTDG-----FGMHLLVHPNGSKYWRLSYRFEKKQRLLALGVYPAVSLADARQRRDE-- 70 (108)
T ss_dssp CCHHHHHHCCC-----CSSCEEEEEE-----TTEEEEECTTSCEEEEEEEEETTEEEEEEEEEETTSCHHHHHHHHHH--
T ss_pred CCHHHHhcCCC-----CCCcEEEecC-----CceEEEEEcCCCEEEEEEEEEcCceEEEecCCCCCCCHHHHHHHHHH--
Confidence 57777777632 2223444332 34666664 699999887762 236788888754
Q ss_pred HHHHHhcCCChHHH
Q 024641 87 VVDALSQGLSSNDA 100 (265)
Q Consensus 87 L~da~~qGls~~ea 100 (265)
+...+.+|..|.+.
T Consensus 71 ~r~~l~~GiDP~~~ 84 (108)
T 3ju0_A 71 AKKLLAAGIDPSAK 84 (108)
T ss_dssp HHHHHHTTCCGGGS
T ss_pred HHHHHHcCCCHHHH
Confidence 56778999999765
No 159
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=21.50 E-value=97 Score=25.02 Aligned_cols=49 Identities=14% Similarity=0.148 Sum_probs=35.6
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCccc
Q 024641 95 LSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTIT 144 (265)
Q Consensus 95 ls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~t 144 (265)
++..+..+. .+.++..|+..-+++=+.+|-.|+.-...| |.+++||.+.
T Consensus 188 ~~~~~v~~~-a~~gd~~a~~i~~~~~~~L~~~i~~l~~~l~p~~IvlgG~i~ 238 (292)
T 2gup_A 188 WDGRKIYQE-AAAGNILCQEAIERMNRNLAQGLLNIQYLIDPGVISLGGSIS 238 (292)
T ss_dssp CCHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGG
T ss_pred CCHHHHHHH-HHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCccc
Confidence 455555544 457788888888888888888887766554 6788888764
No 160
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=21.49 E-value=1.5e+02 Score=23.89 Aligned_cols=32 Identities=28% Similarity=0.311 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 112 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 112 (265)
.+.-.++.-++.+|+++.+|++.|...++.+.
T Consensus 249 DaF~a~~~~~l~~g~~~~~a~~~A~a~aa~~v 280 (306)
T 2abq_A 249 DSVVAGFLAALQEGKSLEDAVPFAVAAGSATA 280 (306)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 57788899999999999999999887666554
No 161
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=21.46 E-value=36 Score=29.45 Aligned_cols=45 Identities=24% Similarity=0.267 Sum_probs=33.3
Q ss_pred ccccCceeeeeeeccCCceeeeeee-cceEEEEeechh---HHHHHHHHHH
Q 024641 36 SSQSGKFTILNCFDMGSGTVACGVK-EGVKLYFYNIRA---AHVERARNVA 82 (265)
Q Consensus 36 sSkSGkFT~~nCFDmgsGtlACavK-EGVKLY~ynIRs---~hvE~~R~~A 82 (265)
+|+.| .+++++| +||||.+-++. .|-+-+-.-|-. ..++.++.|.
T Consensus 239 ~~~~~-~~vlDpF-~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl 287 (319)
T 1eg2_A 239 LSHPG-STVLDFF-AGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFL 287 (319)
T ss_dssp HSCTT-CEEEETT-CTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC
T ss_pred hCCCC-CEEEecC-CCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHH
Confidence 34444 3788988 89998766554 488888888888 7777777775
No 162
>1apy_B Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_B*
Probab=21.45 E-value=83 Score=25.54 Aligned_cols=19 Identities=16% Similarity=0.240 Sum_probs=15.8
Q ss_pred HHHHHhcCCChHHHHHHHH
Q 024641 87 VVDALSQGLSSNDAAKQAQ 105 (265)
Q Consensus 87 L~da~~qGls~~eaAk~Aq 105 (265)
+.+.+.+|++|+||++++-
T Consensus 67 iv~~m~~G~~~~~A~~~~i 85 (141)
T 1apy_B 67 AVEYMRRGEDPTIACQKVI 85 (141)
T ss_dssp HHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHH
Confidence 4567779999999998876
No 163
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=21.45 E-value=1.1e+02 Score=25.03 Aligned_cols=33 Identities=12% Similarity=0.039 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAK 113 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAK 113 (265)
.+.-.++.-++.+|+++.||++.|...+..+.+
T Consensus 235 D~f~a~~~a~l~~g~~~~~A~~~A~a~a~~~v~ 267 (288)
T 1jxh_A 235 CTLSAALAALRPRHRSWGETVNEAKAWLSAALA 267 (288)
T ss_dssp HHHHHHHHHHGGGSSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 567788999999999999999988876665543
No 164
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=21.44 E-value=45 Score=27.66 Aligned_cols=37 Identities=22% Similarity=0.389 Sum_probs=27.2
Q ss_pred eeeccCCce--eeee-eec-c--eEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGT--VACG-VKE-G--VKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGt--lACa-vKE-G--VKLY~ynIRs~hvE~~R~~A 82 (265)
...|+|||+ +++. .+. | .+++..-+....++.+|+.+
T Consensus 108 ~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~ 150 (336)
T 2b25_A 108 TVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNY 150 (336)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHH
T ss_pred EEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Confidence 578898886 2222 233 3 78999999999999888775
No 165
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=21.37 E-value=1.4e+02 Score=24.13 Aligned_cols=31 Identities=19% Similarity=0.144 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 111 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 111 (265)
.+.-.++.-++.+|+++.+|++.|...++.+
T Consensus 265 Daf~a~~~~~l~~g~~~~~a~~~A~~~aa~~ 295 (319)
T 3pl2_A 265 DAFGGALCHGLLSEWPLEKVLRFANTAGALV 295 (319)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5788899999999999999999887665544
No 166
>4hff_B Putative periplasmic protein; amidase, hydrolase; 2.40A {Salmonella typhimurium}
Probab=21.35 E-value=11 Score=29.84 Aligned_cols=26 Identities=19% Similarity=0.415 Sum_probs=17.0
Q ss_pred HHHHHHhc----ccc-ccccCceeeeeeecc
Q 024641 25 EKCRQLVG----EDA-SSQSGKFTILNCFDM 50 (265)
Q Consensus 25 EK~R~LVG----ee~-sSkSGkFT~~nCFDm 50 (265)
++.|+||- .+. ++..|+|++|.|.||
T Consensus 58 ~~~~~Li~~yL~~~y~~~~~~~f~~lKClDl 88 (104)
T 4hff_B 58 HEIDEIAKKYSGLKYNGSISSDFNTMKCIDF 88 (104)
T ss_dssp HHHHHHHHHHHTCCCCCSSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHcccccCcCCCcchhhhHHHH
Confidence 34555553 232 344589999999997
No 167
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=21.19 E-value=1.4e+02 Score=24.11 Aligned_cols=32 Identities=13% Similarity=0.037 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 112 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 112 (265)
.+.-.++.-++.+|+++.+|++.|...++.+.
T Consensus 258 DaF~ag~~~~l~~g~~~~~a~~~a~~~aa~~v 289 (313)
T 2v78_A 258 DAMAGTFVSLYLQGKDIEYSLAHGIAASTLVI 289 (313)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 57788899999999999999999887665543
No 168
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=21.06 E-value=48 Score=26.66 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=27.3
Q ss_pred eeeeccCCcee--eeee----ecceEEEEeechhHHHHHHHHHHH
Q 024641 45 LNCFDMGSGTV--ACGV----KEGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 45 ~nCFDmgsGtl--ACav----KEGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
..+.|+|||+= ++.. +.+.+++.--|-...++.+|+++-
T Consensus 38 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~ 82 (299)
T 3g5t_A 38 KLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKE 82 (299)
T ss_dssp SEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHH
Confidence 36789999872 2221 467788888888888888877653
No 169
>3osr_A Maltose-binding periplasmic protein, green fluore protein; engineered protein, sensor protein, fluorescent protein, MBP maltose sensor; HET: C12 MAL; 2.00A {Escherichia coli}
Probab=21.03 E-value=79 Score=29.99 Aligned_cols=37 Identities=32% Similarity=0.358 Sum_probs=30.8
Q ss_pred hHHHHHHHH--------------HHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 024641 72 AAHVERARN--------------VAIEKAVVDALSQGLSSNDAAKQAQKEG 108 (265)
Q Consensus 72 s~hvE~~R~--------------~A~e~AL~da~~qGls~~eaAk~Aqk~g 108 (265)
.+.+|.+++ .++..||+......-.|++|+++||++-
T Consensus 601 ~~~~~~~~~~~~~p~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (653)
T 3osr_A 601 AATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEDLKDAQTRI 651 (653)
T ss_dssp HHHHHHHHHSEECCCCTTHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcCCCchhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHh
Confidence 566777775 5889999998887779999999999874
No 170
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=20.99 E-value=40 Score=25.79 Aligned_cols=37 Identities=8% Similarity=0.170 Sum_probs=24.3
Q ss_pred eeeccCCcee--e-eeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV--A-CGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl--A-CavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
...|+|||+= + ...+.+.+++..-+....++.+|+++
T Consensus 94 ~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~ 133 (248)
T 2yvl_A 94 RVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNL 133 (248)
T ss_dssp EEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHH
T ss_pred EEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHH
Confidence 5788888861 1 11222778888888877777766553
No 171
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=20.76 E-value=1.5e+02 Score=23.96 Aligned_cols=32 Identities=22% Similarity=0.203 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 112 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 112 (265)
.+.-.++.-++.+|+++.+|++.|...++.+.
T Consensus 251 Daf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v 282 (309)
T 1v1a_A 251 DAFAAGYLAGAVWGLPVEERLRLANLLGASVA 282 (309)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 57888999999999999999999886665543
No 172
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=20.69 E-value=48 Score=25.62 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=25.5
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNV 81 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~ 81 (265)
..+|+|||+= ....+.|.+++..-+-..-++.+|++
T Consensus 51 ~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~ 89 (226)
T 3m33_A 51 RVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN 89 (226)
T ss_dssp EEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH
T ss_pred eEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh
Confidence 5789999872 12234477888888887777777765
No 173
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=20.63 E-value=1.4e+02 Score=24.01 Aligned_cols=32 Identities=16% Similarity=0.163 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 112 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 112 (265)
.+.-.++..++.+|+++.+|++.|...++.+.
T Consensus 256 Daf~a~~~~~l~~g~~~~~a~~~A~~~aa~~~ 287 (309)
T 3cqd_A 256 DSMVGAMTLKLAENASLEEMVRFGVAAGSAAT 287 (309)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 57788899999999999999999987666544
No 174
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=20.53 E-value=36 Score=25.49 Aligned_cols=37 Identities=11% Similarity=0.012 Sum_probs=24.1
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
...|+|||+= ....+.+-+++.-.+-...++.+|+++
T Consensus 45 ~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~ 84 (250)
T 2p7i_A 45 NLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRL 84 (250)
T ss_dssp CEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHS
T ss_pred cEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhh
Confidence 4789999872 122345557777777777777776653
No 175
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=20.48 E-value=41 Score=27.26 Aligned_cols=37 Identities=19% Similarity=0.280 Sum_probs=26.1
Q ss_pred eeeccCCce--eee-eeec-ceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGT--VAC-GVKE-GVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGt--lAC-avKE-GVKLY~ynIRs~hvE~~R~~A 82 (265)
...|+|||+ ++. ..+. |.+++...|-...++.+|+++
T Consensus 93 ~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~ 133 (318)
T 2fk8_A 93 TLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVL 133 (318)
T ss_dssp EEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 578999986 222 2233 778898888888888877654
No 176
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=20.46 E-value=52 Score=25.60 Aligned_cols=40 Identities=13% Similarity=0.071 Sum_probs=28.0
Q ss_pred eeeeccCCceee---eeeecceEEEEeechhHHHHHHHHHHHH
Q 024641 45 LNCFDMGSGTVA---CGVKEGVKLYFYNIRAAHVERARNVAIE 84 (265)
Q Consensus 45 ~nCFDmgsGtlA---CavKEGVKLY~ynIRs~hvE~~R~~A~e 84 (265)
..++|+|||+=. -..+.+-+++...+-..-++.+|+++-+
T Consensus 39 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~ 81 (260)
T 1vl5_A 39 EEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEG 81 (260)
T ss_dssp CEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHh
Confidence 378999998621 1223445888888888888888887643
No 177
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=20.43 E-value=1.5e+02 Score=24.64 Aligned_cols=32 Identities=31% Similarity=0.386 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 112 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 112 (265)
.+.-.++.-++.+|+++.+|++.|...++.+.
T Consensus 285 Daf~a~~~~~l~~g~~l~~a~~~A~~~aa~~v 316 (336)
T 4du5_A 285 DGFAVGVISALLDGLGVPEAVKRGAWIGARAV 316 (336)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 57888999999999999999999887765543
No 178
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=20.31 E-value=51 Score=25.08 Aligned_cols=37 Identities=22% Similarity=0.214 Sum_probs=23.8
Q ss_pred eeeccCCcee--ee-eeec-c--eEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV--AC-GVKE-G--VKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl--AC-avKE-G--VKLY~ynIRs~hvE~~R~~A 82 (265)
.++|+|||+= +. ..+. | .+++..-|-...++.+|+++
T Consensus 80 ~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~ 122 (226)
T 1i1n_A 80 KALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNV 122 (226)
T ss_dssp EEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Confidence 6789999861 11 1122 2 57888888777777776654
No 179
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=20.15 E-value=1e+02 Score=25.37 Aligned_cols=50 Identities=14% Similarity=0.100 Sum_probs=37.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCccce
Q 024641 95 LSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTITE 145 (265)
Q Consensus 95 ls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~tE 145 (265)
++..+..+ +.+.++..|+..-+++-+.+|-.|+.-...| |.++.||.+.+
T Consensus 198 ~~~~~i~~-~a~~gd~~a~~~~~~~~~~La~~i~~l~~~~~p~~IvlgGgi~~ 249 (297)
T 4htl_A 198 ITGEEIFA-NYDAHDAVSERLITEFYTGICTGLYNLIYLFDPTHIFIGGGITS 249 (297)
T ss_dssp CCHHHHHH-HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGG
T ss_pred CCHHHHHH-HHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCcccc
Confidence 34445443 4456888888899999999998888766665 67999998875
No 180
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=20.13 E-value=1.5e+02 Score=24.76 Aligned_cols=53 Identities=13% Similarity=-0.041 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhhh
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIY 138 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEalY 138 (265)
.+.-.++..++.+|.++.||++.|......|-+. +.+.=.| -.-|..|.+.|+
T Consensus 225 D~f~aai~a~l~~g~~l~~A~~~A~~~~~~ai~~----~~~~~~~-~~~gv~~e~~L~ 277 (291)
T 3mbh_A 225 DTFTSVITGSLMQGDSLPMALDRATQFILQGIRA----TFGYEYD-NREGILLEKVLH 277 (291)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT----TTTSCCC-GGGCSCHHHHGG
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH----HHhcCCC-cccCCcHHHHHH
Confidence 5778899999999999999999988766665543 3333233 233444555543
No 181
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=20.11 E-value=36 Score=25.92 Aligned_cols=38 Identities=18% Similarity=0.266 Sum_probs=25.1
Q ss_pred eeeeccCCceee---eeeec--ceEEEEeechhHHHHHHHHHH
Q 024641 45 LNCFDMGSGTVA---CGVKE--GVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 45 ~nCFDmgsGtlA---CavKE--GVKLY~ynIRs~hvE~~R~~A 82 (265)
....|+|||+=. ...+. +.+++...+-...++.+|+++
T Consensus 46 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~ 88 (234)
T 3dtn_A 46 PDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRF 88 (234)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHT
T ss_pred CeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhh
Confidence 367899999721 11222 678888888777777776654
No 182
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=20.11 E-value=1.5e+02 Score=24.00 Aligned_cols=31 Identities=6% Similarity=0.055 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 111 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 111 (265)
.+.-.++..++.+|+++.+|++.|...++.+
T Consensus 247 Daf~a~~~~~l~~g~~~~~a~~~a~~~aa~~ 277 (302)
T 2c4e_A 247 DSYRAGFLSAYVKGYDLEKCGLIGAATASFV 277 (302)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5778889999999999999999887765544
No 183
>3f5f_A Maltose-binding periplasmic protein, heparan sulfate 2-O-sulfotransferase 1; maltose binding protein, fusion, heparan sulfate biosynthesis; HET: GLC A3P; 2.65A {Escherichia coli k-12}
Probab=20.11 E-value=56 Score=30.02 Aligned_cols=32 Identities=28% Similarity=0.247 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKA 111 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kA 111 (265)
..++..++++++...+++++|.+++++...++
T Consensus 340 ~~~~~~~i~~vl~G~~t~eeal~~~~~~i~~~ 371 (658)
T 3f5f_A 340 WYAVRTAVINAASGRQTVDAALAAAQTNAAAD 371 (658)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 35788999999999999999999999887655
No 184
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=20.08 E-value=60 Score=26.06 Aligned_cols=38 Identities=21% Similarity=0.210 Sum_probs=26.7
Q ss_pred eeeeccCCcee--eee-ee---cceEEEEeechhHHHHHHHHHH
Q 024641 45 LNCFDMGSGTV--ACG-VK---EGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 45 ~nCFDmgsGtl--ACa-vK---EGVKLY~ynIRs~hvE~~R~~A 82 (265)
.+..|+||||= +.. .+ .+.+++...|-...++.+|+++
T Consensus 24 ~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~ 67 (284)
T 3gu3_A 24 VHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELF 67 (284)
T ss_dssp CEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHH
T ss_pred CeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence 36789999872 221 12 3688899998888888887765
No 185
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=20.07 E-value=52 Score=25.13 Aligned_cols=35 Identities=9% Similarity=-0.007 Sum_probs=19.9
Q ss_pred eeeccCCcee--ee--eee--cceEEEEeechhHHHHHHHH
Q 024641 46 NCFDMGSGTV--AC--GVK--EGVKLYFYNIRAAHVERARN 80 (265)
Q Consensus 46 nCFDmgsGtl--AC--avK--EGVKLY~ynIRs~hvE~~R~ 80 (265)
...|+|||+= +. +-+ .+-++|..-+-...++.+++
T Consensus 76 ~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~ 116 (227)
T 1g8a_A 76 SVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVP 116 (227)
T ss_dssp EEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHH
T ss_pred EEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHH
Confidence 5789999872 11 111 22477777776655554443
No 186
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=20.05 E-value=45 Score=25.99 Aligned_cols=37 Identities=16% Similarity=0.029 Sum_probs=26.7
Q ss_pred eeeccCCcee---eeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
.+.|+|||+= ....+.|.+++...|-..-++.+|+++
T Consensus 53 ~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~ 92 (263)
T 3pfg_A 53 SLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRN 92 (263)
T ss_dssp EEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHC
T ss_pred cEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhC
Confidence 5789999972 223445778888888888888887763
Done!