Query 024641
Match_columns 265
No_of_seqs 20 out of 22
Neff 1.9
Searched_HMMs 13730
Date Mon Mar 25 11:51:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024641.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024641hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1i9ga_ c.66.1.13 (A:) Probabl 74.1 0.61 4.4E-05 38.3 1.9 37 46-82 99-141 (264)
2 d1laxa_ c.94.1.1 (A:) D-maltod 68.9 2.6 0.00019 31.9 4.3 27 81-107 341-367 (369)
3 d1l3ia_ c.66.1.22 (A:) Precorr 67.6 1.4 0.0001 32.3 2.5 62 21-87 15-80 (186)
4 d1yb2a1 c.66.1.13 (A:6-255) Hy 65.7 1.1 8.3E-05 36.1 1.7 37 46-82 88-130 (250)
5 d1eu8a_ c.94.1.1 (A:) D-maltod 65.0 4.2 0.0003 30.8 4.8 32 81-112 374-405 (407)
6 d1nt2a_ c.66.1.3 (A:) Fibrilla 63.9 1.4 9.9E-05 34.0 1.8 36 46-82 59-100 (209)
7 d1g60a_ c.66.1.11 (A:) Methylt 63.8 1.4 0.0001 32.4 1.8 47 34-82 207-254 (256)
8 d1pjza_ c.66.1.36 (A:) Thiopur 63.7 2.1 0.00015 29.5 2.6 36 46-82 23-62 (201)
9 d1o54a_ c.66.1.13 (A:) Hypothe 63.7 1.4 0.0001 35.6 1.9 38 45-82 105-148 (266)
10 d1eg2a_ c.66.1.11 (A:) m.RsrI 63.6 1.3 9.7E-05 33.0 1.7 45 36-82 204-249 (279)
11 d1nkva_ c.66.1.21 (A:) Hypothe 53.5 1.4 0.0001 33.1 0.2 62 22-88 17-82 (245)
12 d1txga1 a.100.1.6 (A:181-335) 52.4 17 0.0012 27.0 6.3 52 78-133 78-137 (155)
13 d1booa_ c.66.1.11 (A:) m.PvuII 50.6 2.4 0.00017 31.9 1.1 48 34-83 245-293 (320)
14 d1t3ta6 d.139.1.1 (A:430-616) 50.6 1.4 0.0001 35.0 -0.3 28 43-70 67-101 (187)
15 d2nxca1 c.66.1.39 (A:1-254) Pr 49.4 3.1 0.00023 33.3 1.7 46 37-87 118-167 (254)
16 d1d8wa_ c.1.15.2 (A:) L-rhamno 48.8 7 0.00051 35.0 4.1 55 73-134 335-389 (416)
17 d1e4ft2 c.55.1.1 (T:200-390) C 47.2 12 0.00087 27.6 4.7 47 46-100 10-57 (191)
18 d1f0ya2 c.2.1.6 (A:12-203) Sho 44.1 7.5 0.00055 29.3 3.1 50 50-100 15-64 (192)
19 d2nn6h2 b.84.4.2 (H:25-72) Rib 41.8 2.4 0.00018 28.1 -0.1 12 144-155 12-23 (48)
20 d1ursa_ c.94.1.1 (A:) D-maltod 39.2 9.8 0.00071 28.5 3.0 26 85-110 341-366 (367)
21 d1i1na_ c.66.1.7 (A:) Protein- 38.6 6.9 0.0005 30.2 2.1 38 46-83 79-122 (224)
22 d1dusa_ c.66.1.4 (A:) Hypothet 38.1 8.8 0.00064 27.9 2.5 37 46-83 55-95 (194)
23 d1f32a_ d.62.1.1 (A:) Pepsin i 38.0 2.4 0.00017 33.8 -0.8 33 48-81 3-35 (147)
24 d2icsa2 c.1.9.14 (A:55-321) Pu 37.2 11 0.00081 24.6 2.7 26 87-112 236-261 (267)
25 d2fe0a1 b.134.1.1 (A:1-131) Sm 36.0 11 0.00082 28.6 2.9 27 43-69 25-52 (131)
26 d1zx0a1 c.66.1.16 (A:8-236) Gu 35.4 8.4 0.00061 28.9 2.1 37 46-82 56-96 (229)
27 d2o57a1 c.66.1.18 (A:16-297) P 35.0 4.7 0.00035 30.8 0.6 43 46-88 70-116 (282)
28 d1o12a2 c.1.9.10 (A:44-331) N- 34.9 18 0.0013 25.0 3.8 27 86-112 255-282 (288)
29 d1k78a1 a.4.1.5 (A:19-81) Pax- 33.6 18 0.0013 24.3 3.4 31 89-119 25-55 (63)
30 d1jxha_ c.72.1.2 (A:) 4-amino- 33.3 11 0.00081 29.5 2.6 36 80-115 212-247 (266)
31 d1yrra2 c.1.9.10 (A:54-350) N- 33.2 22 0.0016 23.9 3.8 27 89-115 266-293 (297)
32 d1y60a_ d.14.1.12 (A:) Formald 32.4 23 0.0017 28.1 4.4 42 78-119 85-144 (168)
33 d1siqa1 a.29.3.1 (A:239-392) G 31.5 79 0.0057 22.1 7.6 51 74-126 60-110 (154)
34 d2uubt1 a.7.6.1 (T:8-106) Ribo 31.4 24 0.0017 25.4 3.9 44 70-113 9-61 (99)
35 d2b25a1 c.66.1.13 (A:6-329) Hy 30.6 10 0.00074 31.4 2.0 37 46-82 101-143 (324)
36 d2gupa2 c.55.1.10 (A:115-289) 30.5 28 0.002 24.3 4.2 53 93-146 69-123 (175)
37 d1vi9a_ c.72.1.5 (A:) Pyridoxa 30.5 41 0.003 26.2 5.6 49 80-129 223-271 (288)
38 d1y0pa2 c.3.1.4 (A:111-361,A:5 30.4 4.1 0.0003 30.7 -0.5 41 135-180 257-305 (308)
39 d1kyha_ c.72.1.4 (A:) Hypothet 28.9 45 0.0033 26.5 5.7 67 50-118 185-252 (275)
40 d1ve3a1 c.66.1.43 (A:2-227) Hy 28.8 11 0.00084 26.4 1.8 38 48-85 42-82 (226)
41 d1o91a_ b.22.1.1 (A:) Collagen 28.5 13 0.00094 25.8 2.0 30 42-72 27-56 (131)
42 d2q09a2 c.1.9.17 (A:66-366) Pr 28.3 23 0.0017 23.6 3.2 21 92-112 273-293 (301)
43 d2gh1a1 c.66.1.49 (A:13-293) M 28.2 14 0.001 28.6 2.3 37 48-84 32-74 (281)
44 d2bbaa1 b.18.1.4 (A:17-196) Ep 27.5 12 0.00087 30.0 1.8 27 41-69 75-101 (180)
45 d1ub0a_ c.72.1.2 (A:) 4-amino- 26.0 32 0.0024 26.3 4.1 36 80-115 209-244 (258)
46 d1z6ra3 c.55.1.10 (A:211-406) 25.7 38 0.0028 24.0 4.3 50 95-145 85-136 (196)
47 d1shwb_ b.18.1.4 (B:) Ligand-b 25.1 17 0.0012 29.1 2.3 27 41-69 73-99 (181)
48 d1kpga_ c.66.1.18 (A:) CmaA1 { 25.0 11 0.00078 30.4 1.1 52 29-84 52-107 (285)
49 d2a14a1 c.66.1.15 (A:5-261) In 25.0 23 0.0017 25.6 2.9 38 46-83 54-95 (257)
50 d1pk6c_ b.22.1.1 (C:) Compleme 24.9 13 0.00098 25.6 1.5 30 42-72 29-58 (129)
51 d2ap1a1 c.55.1.10 (A:118-303) 24.5 86 0.0063 21.5 5.9 64 81-145 75-140 (186)
52 d1kkha1 d.14.1.5 (A:1-180) Mev 24.0 44 0.0032 23.3 4.2 49 81-143 122-170 (180)
53 d2gy9t1 a.7.6.1 (T:4-86) Ribos 23.7 39 0.0028 23.2 3.8 44 70-113 7-59 (83)
54 d2i6ga1 c.66.1.44 (A:1-198) Pu 23.1 20 0.0015 25.6 2.2 36 47-82 34-72 (198)
55 d1pk6b_ b.22.1.1 (B:) Compleme 22.8 20 0.0014 24.5 2.0 30 42-72 29-58 (132)
56 d1g8sa_ c.66.1.3 (A:) Fibrilla 22.5 15 0.0011 28.4 1.5 36 46-82 77-118 (230)
57 d1wdka3 c.2.1.6 (A:311-496) Fa 22.1 18 0.0013 26.7 1.8 48 50-98 15-62 (186)
58 d1vl5a_ c.66.1.41 (A:) Hypothe 22.0 28 0.0021 24.7 2.8 41 46-86 18-61 (231)
59 d2vhla2 c.1.9.10 (A:58-358) N- 21.8 20 0.0015 24.9 1.9 28 88-115 269-297 (301)
60 d1ws6a1 c.66.1.46 (A:15-185) M 21.5 34 0.0024 24.8 3.2 37 47-83 45-84 (171)
61 d1bg6a2 c.2.1.6 (A:4-187) N-(1 21.1 9 0.00065 26.6 -0.1 43 39-81 1-43 (184)
62 d1xxla_ c.66.1.41 (A:) Hypothe 20.3 27 0.0019 25.4 2.4 52 30-85 7-61 (234)
No 1
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=74.12 E-value=0.61 Score=38.27 Aligned_cols=37 Identities=27% Similarity=0.425 Sum_probs=29.8
Q ss_pred eeeccCCce------eeeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGT------VACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGt------lACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
..+|.|||| ||-++...-++|.+-+|..|++.||...
T Consensus 99 ~VLE~G~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~ 141 (264)
T d1i9ga_ 99 RVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNV 141 (264)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHH
T ss_pred EEEecCcCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhh
Confidence 678888875 5566677779999999999999998654
No 2
>d1laxa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Escherichia coli [TaxId: 562]}
Probab=68.86 E-value=2.6 Score=31.85 Aligned_cols=27 Identities=33% Similarity=0.398 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKE 107 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~ 107 (265)
.++..+|.+++...++++||++.||++
T Consensus 341 ~~~~~~~~~~~~G~~s~~eal~~~~~~ 367 (369)
T d1laxa_ 341 YAVRTAVINAASGRQTVDEALKDAQTR 367 (369)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHh
Confidence 578899999999999999999999875
No 3
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=67.60 E-value=1.4 Score=32.32 Aligned_cols=62 Identities=16% Similarity=0.152 Sum_probs=45.7
Q ss_pred hccHHHHHHHhccccccccCceeeeeeeccCCce----eeeeeecceEEEEeechhHHHHHHHHHHHHHHH
Q 024641 21 SLTAEKCRQLVGEDASSQSGKFTILNCFDMGSGT----VACGVKEGVKLYFYNIRAAHVERARNVAIEKAV 87 (265)
Q Consensus 21 S~tAEK~R~LVGee~sSkSGkFT~~nCFDmgsGt----lACavKEGVKLY~ynIRs~hvE~~R~~A~e~AL 87 (265)
++|.++-|.++=....-+.|. -+.|+|||| +++ ++.+-++|..-+...-++.+|+++-+..|
T Consensus 15 ~~t~~eir~~il~~l~~~~g~----~VLDiGcGsG~~s~~l-A~~~~~V~avD~~~~~l~~a~~n~~~~gl 80 (186)
T d1l3ia_ 15 GPTAMEVRCLIMCLAEPGKND----VAVDVGCGTGGVTLEL-AGRVRRVYAIDRNPEAISTTEMNLQRHGL 80 (186)
T ss_dssp CCCCHHHHHHHHHHHCCCTTC----EEEEESCTTSHHHHHH-HTTSSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred CCChHHHHHHHHHhcCCCCCC----EEEEEECCeEcccccc-cccceEEEEecCCHHHHHHHHHHHHHcCC
Confidence 468888888887777667776 367999997 333 34566899999998888888887655444
No 4
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=65.68 E-value=1.1 Score=36.15 Aligned_cols=37 Identities=11% Similarity=0.235 Sum_probs=29.1
Q ss_pred eeeccCCce------eeeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGT------VACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGt------lACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
.++|.|||| ||.++...-++|.+.++..+++.||+..
T Consensus 88 rVLEiG~GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~ 130 (250)
T d1yb2a1 88 DILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNL 130 (250)
T ss_dssp EEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHH
T ss_pred EEEEeeeeCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHH
Confidence 688999874 3444566679999999999999888764
No 5
>d1eu8a_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=65.03 E-value=4.2 Score=30.78 Aligned_cols=32 Identities=34% Similarity=0.372 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAA 112 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAA 112 (265)
.++..++.+.+...++++||++++|++.++.-
T Consensus 374 ~~~~~~~~~~~~g~~t~~eal~~~~~~~~~~l 405 (407)
T d1eu8a_ 374 EIIQKYVNSALAGKISPQEALDKAQKEAEELV 405 (407)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 46788888889888999999999988766543
No 6
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=63.95 E-value=1.4 Score=34.05 Aligned_cols=36 Identities=22% Similarity=0.320 Sum_probs=27.7
Q ss_pred eeeccCCce------eeeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGT------VACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGt------lACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
..+|+|||| |+..+.+| ++|--.|-...++.+|++|
T Consensus 59 ~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a 100 (209)
T d1nt2a_ 59 RVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELV 100 (209)
T ss_dssp EEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHH
T ss_pred EEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHh
Confidence 588999997 56666776 8999998887777766654
No 7
>d1g60a_ c.66.1.11 (A:) Methyltransferase mboII {Moraxella bovis [TaxId: 476]}
Probab=63.84 E-value=1.4 Score=32.43 Aligned_cols=47 Identities=38% Similarity=0.446 Sum_probs=36.9
Q ss_pred ccccccCceeeeeeeccCCceeeee-eecceEEEEeechhHHHHHHHHHH
Q 024641 34 DASSQSGKFTILNCFDMGSGTVACG-VKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 34 e~sSkSGkFT~~nCFDmgsGtlACa-vKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
+.+|+.| .+++++| |||||.+=| .+-|=+-.-.-|-..+++.|++|-
T Consensus 207 ~~~s~~g-d~VlDpF-~GSGTT~~aa~~~~R~~ig~El~~~y~~~a~~Rl 254 (256)
T d1g60a_ 207 RASSNPN-DLVLDCF-MGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVL 254 (256)
T ss_dssp HHHCCTT-CEEEESS-CTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred HHhCCCC-CEEEECC-CCchHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Confidence 3456667 5999999 999986544 456778888889899999999884
No 8
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}
Probab=63.74 E-value=2.1 Score=29.48 Aligned_cols=36 Identities=17% Similarity=0.018 Sum_probs=28.7
Q ss_pred eeeccCCce----eeeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGT----VACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGt----lACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
-.+|+|||+ +.- ++.|.+++-..|=...++.+|+++
T Consensus 23 rvLd~GCG~G~~a~~l-a~~G~~V~gvD~S~~~i~~a~~~~ 62 (201)
T d1pjza_ 23 RVLVPLCGKSQDMSWL-SGQGYHVVGAELSEAAVERYFTER 62 (201)
T ss_dssp EEEETTTCCSHHHHHH-HHHCCEEEEEEECHHHHHHHHHHH
T ss_pred EEEEecCcCCHHHHHH-HHcCCceEeecccHHHHHHHHHHh
Confidence 468999997 222 367999999999999898888877
No 9
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}
Probab=63.73 E-value=1.4 Score=35.59 Aligned_cols=38 Identities=21% Similarity=0.286 Sum_probs=29.1
Q ss_pred eeeeccCCce--ee----eeeecceEEEEeechhHHHHHHHHHH
Q 024641 45 LNCFDMGSGT--VA----CGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 45 ~nCFDmgsGt--lA----CavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
..++|+|||| ++ -.+..+-++|.+-++..+++.||+.+
T Consensus 105 ~~VLDiG~GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~ 148 (266)
T d1o54a_ 105 DRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNL 148 (266)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Confidence 3678988775 32 34456779999999999999998765
No 10
>d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA methyltransferase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=63.64 E-value=1.3 Score=32.99 Aligned_cols=45 Identities=27% Similarity=0.310 Sum_probs=34.3
Q ss_pred ccccCceeeeeeeccCCceeeeee-ecceEEEEeechhHHHHHHHHHH
Q 024641 36 SSQSGKFTILNCFDMGSGTVACGV-KEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 36 sSkSGkFT~~nCFDmgsGtlACav-KEGVKLY~ynIRs~hvE~~R~~A 82 (265)
+|+-|- ++++|| |||||.+-|+ +-|=|-+-.-|-...++.++.|-
T Consensus 204 ~s~~gd-iVLDpF-~GSGTT~~Aa~~lgR~~ig~El~~~y~~~a~~Ri 249 (279)
T d1eg2a_ 204 LSHPGS-TVLDFF-AGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQL 249 (279)
T ss_dssp HSCTTC-EEEETT-CTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHH
T ss_pred hcCCCC-EEEecC-CCCcHHHHHHHHhCCeEEEEeCCHHHHHHHHHHH
Confidence 455554 799999 9999976654 55777778888888888888773
No 11
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}
Probab=53.50 E-value=1.4 Score=33.12 Aligned_cols=62 Identities=24% Similarity=0.367 Sum_probs=42.1
Q ss_pred ccHHHHHHHhccccccccCceeeeeeeccCCce--eeee--eecceEEEEeechhHHHHHHHHHHHHHHHH
Q 024641 22 LTAEKCRQLVGEDASSQSGKFTILNCFDMGSGT--VACG--VKEGVKLYFYNIRAAHVERARNVAIEKAVV 88 (265)
Q Consensus 22 ~tAEK~R~LVGee~sSkSGkFT~~nCFDmgsGt--lACa--vKEGVKLY~ynIRs~hvE~~R~~A~e~AL~ 88 (265)
.|.++-+. |++-..-+.|+ .|.|+|||+ ++.. -+-|.+++--.+-...++.+|+++-+..|.
T Consensus 17 ~~~~~~~~-l~~~~~l~pg~----~VLDiGCG~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~ 82 (245)
T d1nkva_ 17 FTEEKYAT-LGRVLRMKPGT----RILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVS 82 (245)
T ss_dssp CCHHHHHH-HHHHTCCCTTC----EEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCT
T ss_pred CCHHHHHH-HHHHcCCCCCC----EEEEEcCCCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhcc
Confidence 35555554 44555555564 689999986 3332 234788999999999999998887666554
No 12
>d1txga1 a.100.1.6 (A:181-335) Glycerol-3-phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=52.40 E-value=17 Score=26.95 Aligned_cols=52 Identities=25% Similarity=0.381 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHH------HHHHHHHHHHHHhhhh--hcchhhcchhh
Q 024641 78 ARNVAIEKAVVDALSQGLSSNDAAKQAQK------EGAKAAKLAKRQAKRI--IGPIIAAGWDF 133 (265)
Q Consensus 78 ~R~~A~e~AL~da~~qGls~~eaAk~Aqk------~g~kAAKlA~rQAkRI--~GPiissgWDf 133 (265)
+||+.+-.+| .+|++++|+-+.-.+ ||..++|...+-+++. ==||+.+-.+.
T Consensus 78 sRN~~~G~~l----~~G~~~~e~~~~~~~~~~~~vEG~~t~~~v~~l~~~~~i~~Pi~~~vy~I 137 (155)
T d1txga1 78 GRNGMLGELL----GKGLSIDEAMEELERRGVGVVEGYKTAEKAYRLSSKINADTKLLDSIYRV 137 (155)
T ss_dssp HHHHHHHHHH----HTTCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred CCccHHHHHH----hhhhhHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 6787776554 689999999776543 7888998888877653 12888776654
No 13
>d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]}
Probab=50.62 E-value=2.4 Score=31.89 Aligned_cols=48 Identities=15% Similarity=0.165 Sum_probs=38.0
Q ss_pred ccccccCceeeeeeeccCCceeeeee-ecceEEEEeechhHHHHHHHHHHH
Q 024641 34 DASSQSGKFTILNCFDMGSGTVACGV-KEGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 34 e~sSkSGkFT~~nCFDmgsGtlACav-KEGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
+.+|.-| .++++|| |||||.+=|+ +.|-|-+-.-|-...++.++.|..
T Consensus 245 ~~~s~~g-diVlDpF-~GSGTT~~AA~~lgR~~Ig~El~~~y~~~a~~Rl~ 293 (320)
T d1booa_ 245 RMLTEPD-DLVVDIF-GGSNTTGLVAERESRKWISFEMKPEYVAASAFRFL 293 (320)
T ss_dssp HHHCCTT-CEEEETT-CTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGS
T ss_pred hhcccCC-CEEEecC-CCCcHHHHHHHHcCCcEEEEeCCHHHHHHHHHHHH
Confidence 4566767 6999999 9999976544 568888888888889999988854
No 14
>d1t3ta6 d.139.1.1 (A:430-616) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]}
Probab=50.60 E-value=1.4 Score=35.03 Aligned_cols=28 Identities=32% Similarity=0.497 Sum_probs=23.6
Q ss_pred eeeeeeccCCceeeeeeec-------ceEEEEeec
Q 024641 43 TILNCFDMGSGTVACGVKE-------GVKLYFYNI 70 (265)
Q Consensus 43 T~~nCFDmgsGtlACavKE-------GVKLY~ynI 70 (265)
-+..|-|||.|-|+|+.+| |+++++-+|
T Consensus 67 ~i~~i~D~GAGGl~~a~~Ema~~~g~G~~i~Ld~V 101 (187)
T d1t3ta6 67 PILFIHDVGAGGLSNAMPELVSDGGRGGKFELRDI 101 (187)
T ss_dssp CEEEEEECCTTTHHHHHHHHHHHTTCEEEEEGGGS
T ss_pred ceeEeccCCCCccccccHHHHhcCCCeEEEEChhc
Confidence 4677999999999999876 888887665
No 15
>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}
Probab=49.41 E-value=3.1 Score=33.27 Aligned_cols=46 Identities=26% Similarity=0.356 Sum_probs=36.0
Q ss_pred cccCceeeeeeeccCCce----eeeeeecceEEEEeechhHHHHHHHHHHHHHHH
Q 024641 37 SQSGKFTILNCFDMGSGT----VACGVKEGVKLYFYNIRAAHVERARNVAIEKAV 87 (265)
Q Consensus 37 SkSGkFT~~nCFDmgsGt----lACavKEGVKLY~ynIRs~hvE~~R~~A~e~AL 87 (265)
.+.|+ ...|+|||| ++ +.|-|.|.+-..|-...++.||+.|-.+-+
T Consensus 118 ~~~g~----~VLDiGcGsG~l~i~-aa~~g~~V~gvDis~~av~~A~~na~~n~~ 167 (254)
T d2nxca1 118 LRPGD----KVLDLGTGSGVLAIA-AEKLGGKALGVDIDPMVLPQAEANAKRNGV 167 (254)
T ss_dssp CCTTC----EEEEETCTTSHHHHH-HHHTTCEEEEEESCGGGHHHHHHHHHHTTC
T ss_pred cCccC----EEEEcccchhHHHHH-HHhcCCEEEEEECChHHHHHHHHHHHHcCC
Confidence 35665 578999997 43 457899999999999999999988765544
No 16
>d1d8wa_ c.1.15.2 (A:) L-rhamnose isomerase {Escherichia coli [TaxId: 562]}
Probab=48.77 E-value=7 Score=35.04 Aligned_cols=55 Identities=25% Similarity=0.445 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh
Q 024641 73 AHVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF 134 (265)
Q Consensus 73 ~hvE~~R~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF 134 (265)
+-|--+ |.+++||..|+ |-|.++-|+||.+++--+++|....-+-+ | +.+.||-|
T Consensus 335 a~v~g~--rn~qka~l~AL---L~p~~~L~~~q~~gD~t~rla~~Ee~K~~-P-~~avW~~~ 389 (416)
T d1d8wa_ 335 AWVIGT--RNMKKALLRAL---LEPTAELRKLEAPGDYTARLALLEEQKSL-P-WQAVWEMY 389 (416)
T ss_dssp HHHHHH--HHHHHHHHHHH---TSCHHHHHHHHTTTCHHHHHHHHHHHTTS-C-HHHHHHHH
T ss_pred HHHHHH--HHHHHHHHHHH---cCCHHHHHHHHHcCCHHHHHHHHHHHhcC-C-hHHHHHHH
Confidence 344444 45788888887 67999999999999988888876544443 4 57789864
No 17
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]}
Probab=47.22 E-value=12 Score=27.62 Aligned_cols=47 Identities=17% Similarity=0.167 Sum_probs=34.4
Q ss_pred eeeccCCceeeeee-ecceEEEEeechhHHHHHHHHHHHHHHHHHHHhcCCChHHH
Q 024641 46 NCFDMGSGTVACGV-KEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDA 100 (265)
Q Consensus 46 nCFDmgsGtlACav-KEGVKLY~ynIRs~hvE~~R~~A~e~AL~da~~qGls~~ea 100 (265)
-|.|||.||.-.++ +.|.-.|...|.-. =+.+.++|+..+. ++..+|
T Consensus 10 ~vvDiG~~tt~i~i~~~G~l~~~~~i~~G------G~~iT~~Ia~~l~--i~~~~A 57 (191)
T d1e4ft2 10 VVVNLGYNFTGLIAYKNGVPIKISYVPVG------MKHVIKDVSAVLD--TSFEES 57 (191)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEESCC------HHHHHHHHHHHHT--CCHHHH
T ss_pred EEEEeCCCcEEEEEEECCeEEEEEEEeeC------hHHHHHHHHHHhc--ccHHHH
Confidence 37899999988755 88999999887655 3456666766664 666655
No 18
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.10 E-value=7.5 Score=29.25 Aligned_cols=50 Identities=14% Similarity=0.290 Sum_probs=39.7
Q ss_pred cCCceeeeeeecceEEEEeechhHHHHHHHHHHHHHHHHHHHhcCCChHHH
Q 024641 50 MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSNDA 100 (265)
Q Consensus 50 mgsGtlACavKEGVKLY~ynIRs~hvE~~R~~A~e~AL~da~~qGls~~ea 100 (265)
||+|=-++.+..|....+|.+...-+++++++ +++.|..++..|+.....
T Consensus 15 mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~-i~~~l~~~~~~~~~~~~~ 64 (192)
T d1f0ya2 15 MGAGIAQVAAATGHTVVLVDQTEDILAKSKKG-IEESLRKVAKKKFAENPK 64 (192)
T ss_dssp HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH-HHHHHHHHHHTTSSSCHH
T ss_pred HHHHHHHHHHhCCCcEEEEECChHHHHHHHhh-HHHHHHHHHHhhhhccch
Confidence 44443366678899999999999999999887 788999999988865443
No 19
>d2nn6h2 b.84.4.2 (H:25-72) Ribosomal RNA-processing protein 4, RRP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.76 E-value=2.4 Score=28.10 Aligned_cols=12 Identities=50% Similarity=1.046 Sum_probs=9.8
Q ss_pred ceeeeecccccc
Q 024641 144 TEGFIRGTGTLF 155 (265)
Q Consensus 144 tEgflRGtGTL~ 155 (265)
-++||||.||-+
T Consensus 12 ~~~~mrGHGTy~ 23 (48)
T d2nn6h2 12 DTGFMRGHGTYM 23 (48)
T ss_dssp CTTCCBCTTEEE
T ss_pred CCCeEcccccEe
Confidence 368999999954
No 20
>d1ursa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Alicyclobacillus acidocaldarius [TaxId: 405212]}
Probab=39.22 E-value=9.8 Score=28.48 Aligned_cols=26 Identities=15% Similarity=0.170 Sum_probs=22.2
Q ss_pred HHHHHHHhcCCChHHHHHHHHHHHHH
Q 024641 85 KAVVDALSQGLSSNDAAKQAQKEGAK 110 (265)
Q Consensus 85 ~AL~da~~qGls~~eaAk~Aqk~g~k 110 (265)
.+|++++..+++++||++.+|+.-+|
T Consensus 341 ~~~~~~~~G~~t~~~al~~~~~~i~k 366 (367)
T d1ursa_ 341 SILQNIIAGKVSPEQGAKDFVQNIQK 366 (367)
T ss_dssp THHHHHHHTSSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHhC
Confidence 57889999999999999999986543
No 21
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.59 E-value=6.9 Score=30.16 Aligned_cols=38 Identities=24% Similarity=0.114 Sum_probs=29.5
Q ss_pred eeeccCCcee------eeeeecceEEEEeechhHHHHHHHHHHH
Q 024641 46 NCFDMGSGTV------ACGVKEGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 46 nCFDmgsGtl------ACavKEGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
+.+|+||||= |-.++..-+++..-+....++.+|+..-
T Consensus 79 ~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~ 122 (224)
T d1i1na_ 79 KALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVR 122 (224)
T ss_dssp EEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred eEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhcc
Confidence 5789999983 3345567789999999999998887653
No 22
>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=38.13 E-value=8.8 Score=27.94 Aligned_cols=37 Identities=19% Similarity=0.267 Sum_probs=25.5
Q ss_pred eeeccCCce----eeeeeecceEEEEeechhHHHHHHHHHHH
Q 024641 46 NCFDMGSGT----VACGVKEGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 46 nCFDmgsGt----lACavKEGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
++.|+|||+ ++++ +.+-+++..-|-...++.+|+++-
T Consensus 55 ~VLDiGcG~G~~~~~la-~~~~~v~~iD~s~~~i~~a~~n~~ 95 (194)
T d1dusa_ 55 DILDLGCGYGVIGIALA-DEVKSTTMADINRRAIKLAKENIK 95 (194)
T ss_dssp EEEEETCTTSHHHHHHG-GGSSEEEEEESCHHHHHHHHHHHH
T ss_pred eEEEEeecCChhHHHHH-hhccccceeeeccccchhHHHHHH
Confidence 689999996 4444 567778887776666666665543
No 23
>d1f32a_ d.62.1.1 (A:) Pepsin inhibitor-3 {Pig roundworm (Ascaris suum) [TaxId: 6253]}
Probab=38.01 E-value=2.4 Score=33.76 Aligned_cols=33 Identities=24% Similarity=0.423 Sum_probs=26.7
Q ss_pred eccCCceeeeeeecceEEEEeechhHHHHHHHHH
Q 024641 48 FDMGSGTVACGVKEGVKLYFYNIRAAHVERARNV 81 (265)
Q Consensus 48 FDmgsGtlACavKEGVKLY~ynIRs~hvE~~R~~ 81 (265)
|-|.+|+.+|+|+ +-+||.+++|--|++..-+.
T Consensus 3 fslsTg~~iCvV~-dN~Lfang~~lR~L~~~E~q 35 (147)
T d1f32a_ 3 FSMSTGPFICTVK-DNQVFVANLPWTMLEGDDIQ 35 (147)
T ss_dssp CEEEESCCCEEEE-TTEEEETTEEEEECCGGGHH
T ss_pred eeeccCceEEEEE-CCEEEecCceeeeCCHHHHH
Confidence 6789999999997 56899999998777665533
No 24
>d2icsa2 c.1.9.14 (A:55-321) Putative adenine deaminase EF0837 {Enterococcus faecalis [TaxId: 1351]}
Probab=37.22 E-value=11 Score=24.60 Aligned_cols=26 Identities=12% Similarity=0.050 Sum_probs=19.6
Q ss_pred HHHHHhcCCChHHHHHHHHHHHHHHH
Q 024641 87 VVDALSQGLSSNDAAKQAQKEGAKAA 112 (265)
Q Consensus 87 L~da~~qGls~~eaAk~Aqk~g~kAA 112 (265)
|.-++..|||+.||.|.|-..++|+-
T Consensus 236 l~~~~~~Gls~~eal~~aT~npA~~l 261 (267)
T d2icsa2 236 MEKLRVVGYDWPEIIEKVTKAPAENF 261 (267)
T ss_dssp HHHHHHHTCCHHHHHHTTTHHHHHHT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 34445669999999998887777654
No 25
>d2fe0a1 b.134.1.1 (A:1-131) Small myristoylated protein 1, Smp-1 {Leishmania major [TaxId: 5664]}
Probab=35.97 E-value=11 Score=28.58 Aligned_cols=27 Identities=19% Similarity=0.320 Sum_probs=22.6
Q ss_pred eeeeeeccCCceeeeeee-cceEEEEee
Q 024641 43 TILNCFDMGSGTVACGVK-EGVKLYFYN 69 (265)
Q Consensus 43 T~~nCFDmgsGtlACavK-EGVKLY~yn 69 (265)
.+..||+.+.|-|..-|. +.=+-+|||
T Consensus 25 ~v~~cF~~~nGlLfRIVd~~~~~WaFYN 52 (131)
T d2fe0a1 25 EVTKGFEKDNGLLFRIVNKKKKQWAYYN 52 (131)
T ss_dssp EEEESSSSTTCSEEEEEETTTTEEEEEE
T ss_pred EEEEeEecCCeEEEEEEeCCCCEEEEEe
Confidence 478899999999999983 455889998
No 26
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.43 E-value=8.4 Score=28.88 Aligned_cols=37 Identities=14% Similarity=0.172 Sum_probs=27.9
Q ss_pred eeeccCCcee----eeeeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTV----ACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtl----ACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
+.+|+|||+= .++-+.+.+++.-.|=...++.+|+++
T Consensus 56 ~VLdIGcG~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~ 96 (229)
T d1zx0a1 56 RVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWA 96 (229)
T ss_dssp EEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHG
T ss_pred eEEEeeccchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHh
Confidence 7899999983 333334567888899888899988775
No 27
>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}
Probab=34.96 E-value=4.7 Score=30.80 Aligned_cols=43 Identities=23% Similarity=0.296 Sum_probs=32.8
Q ss_pred eeeccCCce--ee--eeeecceEEEEeechhHHHHHHHHHHHHHHHH
Q 024641 46 NCFDMGSGT--VA--CGVKEGVKLYFYNIRAAHVERARNVAIEKAVV 88 (265)
Q Consensus 46 nCFDmgsGt--lA--CavKEGVKLY~ynIRs~hvE~~R~~A~e~AL~ 88 (265)
...|+|||+ ++ .+-+-|.++.-..|=..+++.+|+++.+..|.
T Consensus 70 ~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~ 116 (282)
T d2o57a1 70 KGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLA 116 (282)
T ss_dssp EEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCT
T ss_pred EEEEeCCCCcHHHhhhhccCCcEEEEEeccchhhhhhhccccccccc
Confidence 566999986 22 22233889999999999999999998876554
No 28
>d1o12a2 c.1.9.10 (A:44-331) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Thermotoga maritima [TaxId: 2336]}
Probab=34.90 E-value=18 Score=25.04 Aligned_cols=27 Identities=22% Similarity=0.113 Sum_probs=20.1
Q ss_pred HHHHHHhc-CCChHHHHHHHHHHHHHHH
Q 024641 86 AVVDALSQ-GLSSNDAAKQAQKEGAKAA 112 (265)
Q Consensus 86 AL~da~~q-Gls~~eaAk~Aqk~g~kAA 112 (265)
++..++.+ |||+.||.+.|-..++++-
T Consensus 255 ~~~~~v~~~Gls~~eal~~aT~n~A~~l 282 (288)
T d1o12a2 255 AVKNFRKFTGCSITELAKVSSYNSCVEL 282 (288)
T ss_dssp HHHHHHHHHCCCHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 34456664 9999999998887777653
No 29
>d1k78a1 a.4.1.5 (A:19-81) Pax-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.55 E-value=18 Score=24.30 Aligned_cols=31 Identities=19% Similarity=0.226 Sum_probs=23.9
Q ss_pred HHHhcCCChHHHHHHHHHHHHHHHHHHHHHh
Q 024641 89 DALSQGLSSNDAAKQAQKEGAKAAKLAKRQA 119 (265)
Q Consensus 89 da~~qGls~~eaAk~Aqk~g~kAAKlA~rQA 119 (265)
+++.+|+|+.+||++=+---.-+-|+-.|..
T Consensus 25 ~~~~~G~s~r~aA~rf~VS~s~v~k~l~r~r 55 (63)
T d1k78a1 25 ELAHQGVRPCDISRQLRVSHGCVSKILGRYY 55 (63)
T ss_dssp HHHHTTCCHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHhCCCHHHHHHHHHHHH
Confidence 5678999999999997766666777666543
No 30
>d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]}
Probab=33.35 E-value=11 Score=29.50 Aligned_cols=36 Identities=14% Similarity=0.047 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLA 115 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA 115 (265)
=-..-.||.-.+.+|++..||.++|++--.+|-|.+
T Consensus 212 Gc~lasaiaa~La~G~~l~~Av~~A~~~v~~~i~~s 247 (266)
T d1jxha_ 212 GCTLSAALAALRPRHRSWGETVNEAKAWLSAALAQA 247 (266)
T ss_dssp HHHHHHHHHHHGGGSSSHHHHHHHHHHHHHHHHTTG
T ss_pred hHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhC
Confidence 356888999999999999999999987766655443
No 31
>d1yrra2 c.1.9.10 (A:54-350) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Escherichia coli [TaxId: 562]}
Probab=33.22 E-value=22 Score=23.86 Aligned_cols=27 Identities=15% Similarity=0.223 Sum_probs=21.2
Q ss_pred HHHh-cCCChHHHHHHHHHHHHHHHHHH
Q 024641 89 DALS-QGLSSNDAAKQAQKEGAKAAKLA 115 (265)
Q Consensus 89 da~~-qGls~~eaAk~Aqk~g~kAAKlA 115 (265)
.++. -|||+.||.+.|-.-+|||-.+.
T Consensus 266 ~~v~~~gls~~~al~~aT~n~A~~LGld 293 (297)
T d1yrra2 266 NLVEHCGIALDEVLRMATLYPARAIGVE 293 (297)
T ss_dssp HHHHHHCCCHHHHHHHHTHHHHHHTTCT
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHhCCC
Confidence 3444 39999999999999988886553
No 32
>d1y60a_ d.14.1.12 (A:) Formaldehyde-activating enzyme, FAE {Methylobacterium extorquens [TaxId: 408]}
Probab=32.42 E-value=23 Score=28.11 Aligned_cols=42 Identities=31% Similarity=0.389 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHH------------------HHHHHHHHHHHHHHHHHh
Q 024641 78 ARNVAIEKAVVDALSQGLSSNDAA------------------KQAQKEGAKAAKLAKRQA 119 (265)
Q Consensus 78 ~R~~A~e~AL~da~~qGls~~eaA------------------k~Aqk~g~kAAKlA~rQA 119 (265)
.=|.|+-+|..|++.+|.-|+|-+ +.-++--..|+|+|-+.|
T Consensus 85 paQaaVA~aV~D~V~eG~iPk~~a~dl~iiv~V~i~p~a~D~~kiy~~Ny~ATk~AI~rA 144 (168)
T d1y60a_ 85 PAQHGVAMAVQDAVAEGIIPADEADDLYVLVGVFIHWEAADDAKIQKYNYEATKLSIQRA 144 (168)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTTGGGEEEEEEECCCTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCChhhhccEEEEEEEeeCccccCHHHHHHHHHHHHHHHHHHH
Confidence 358999999999999998877654 445566677888887766
No 33
>d1siqa1 a.29.3.1 (A:239-392) Glutaryl-CoA dehydrogenase GCDH {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.54 E-value=79 Score=22.14 Aligned_cols=51 Identities=12% Similarity=0.133 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcch
Q 024641 74 HVERARNVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPI 126 (265)
Q Consensus 74 hvE~~R~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPi 126 (265)
.+|.+|.-.+ ...+.+.+|.+....+..|+..+..++..+.++|-.|+|+.
T Consensus 60 ~~~~~r~~~~--~aa~~~d~~~~~~~~~~~aK~~a~~~a~~~~~~a~qi~Gg~ 110 (154)
T d1siqa1 60 EITLGLHACL--QLGRLKDQDKAAPEMVSLLKRNNCGKALDIARQARDMLGGN 110 (154)
T ss_dssp HHHHHHHHHH--HHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHH--HHHHhhhhcchhhHHHHHHHHHhhhHHHHHHHHHHHHhhcC
Confidence 3455554333 34577888998888888888888888888999999999975
No 34
>d2uubt1 a.7.6.1 (T:8-106) Ribosomal protein S20 {Thermus thermophilus [TaxId: 274]}
Probab=31.41 E-value=24 Score=25.41 Aligned_cols=44 Identities=27% Similarity=0.246 Sum_probs=31.3
Q ss_pred chhHHHHHHHHHHHH-------HHHHHHHhcCC--ChHHHHHHHHHHHHHHHH
Q 024641 70 IRAAHVERARNVAIE-------KAVVDALSQGL--SSNDAAKQAQKEGAKAAK 113 (265)
Q Consensus 70 IRs~hvE~~R~~A~e-------~AL~da~~qGl--s~~eaAk~Aqk~g~kAAK 113 (265)
||..-..+.|++++. +.+.+|+..|- ...++.+.|++.-+||++
T Consensus 9 iRq~~krr~rN~~~kS~~kT~iKk~~~ai~~~d~e~A~~~l~~a~s~iDKAak 61 (99)
T d2uubt1 9 HRQSLKRRLRNKAKKSAIKTLSKKAIQLAQEGKAEEALKIMRKAESLIDKAAK 61 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHh
Confidence 566777778888774 44567777774 245667889999888875
No 35
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.62 E-value=10 Score=31.36 Aligned_cols=37 Identities=19% Similarity=0.374 Sum_probs=27.1
Q ss_pred eeeccCCce--eee----eeecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGT--VAC----GVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGt--lAC----avKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
.+.|.|||| +++ ++...-++|.+-|+..+++.||+..
T Consensus 101 rVLE~GtGsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~ 143 (324)
T d2b25a1 101 TVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNY 143 (324)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHH
T ss_pred EEEEecccccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHH
Confidence 467777765 333 3345568999999999999998754
No 36
>d2gupa2 c.55.1.10 (A:115-289) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=30.50 E-value=28 Score=24.30 Aligned_cols=53 Identities=13% Similarity=0.140 Sum_probs=39.8
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCcccee
Q 024641 93 QGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTITEG 146 (265)
Q Consensus 93 qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~tEg 146 (265)
..++.++..+ +.+.+++.|+..-+++=+-++-.|+.-..+| |.+..||.+++.
T Consensus 69 ~~~~~~~l~~-~~~~gd~~a~~~~~~~~~~la~~i~~~i~~ldp~~IvlGG~i~~~ 123 (175)
T d2gupa2 69 TDWDGRKIYQ-EAAAGNILCQEAIERMNRNLAQGLLNIQYLIDPGVISLGGSISQN 123 (175)
T ss_dssp CCCCHHHHHH-HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGC
T ss_pred cchhhHHHHH-HHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceEEECCcccch
Confidence 4456665554 4456888888888888888898888888887 688899987654
No 37
>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]}
Probab=30.45 E-value=41 Score=26.24 Aligned_cols=49 Identities=14% Similarity=0.103 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhc
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAA 129 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiiss 129 (265)
=.+.-.+|...+.+|++..||.++|..--.++-+.+.....|=| +||.|
T Consensus 223 GD~fsa~l~a~l~~G~~l~~A~~~A~~~v~~~l~~t~~~~~~EL-~li~~ 271 (288)
T d1vi9a_ 223 GDVTSGLLLVKLLQGATLQEALEHVTAAVYEIMVTTKAMQEYEL-QVVAA 271 (288)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCSSC-CTTTT
T ss_pred hHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhcCchhH-HHHhh
Confidence 46678899999999999999999998877777766554333211 45554
No 38
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}
Probab=30.42 E-value=4.1 Score=30.74 Aligned_cols=41 Identities=34% Similarity=0.635 Sum_probs=30.0
Q ss_pred hhhhhcCccceeeeeccccccccccccccccccccc--------hhhhcccccc
Q 024641 135 EAIYYGGTITEGFIRGTGTLFGAYAGGFLGEERLGR--------FGYLVGSHLG 180 (265)
Q Consensus 135 EalYyGGt~tEgflRGtGTL~Gty~GGf~GE~RlGr--------~GYLvGShlG 180 (265)
+++.-.+++++|+ ++.| ...||.||-+|||. ||-++|.+..
T Consensus 257 ~~~~~~~~~~~gl-~a~G----~~~~g~hg~nrlg~~~~~~~~~~g~~ag~~a~ 305 (308)
T d1y0pa2 257 EVMNAKKQVIPGL-YGAG----EVTGGVHGANRLGGNAISDIITFGRLAGEEAA 305 (308)
T ss_dssp EEECTTSCEEEEE-EECS----TTEESSSTTSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred ceecCCCCcccce-eehh----hhhccccCcCCCchhhHHHHHHHHHHHHHHHH
Confidence 4566778888884 5655 45679999999996 6777776544
No 39
>d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]}
Probab=28.90 E-value=45 Score=26.48 Aligned_cols=67 Identities=13% Similarity=0.113 Sum_probs=47.5
Q ss_pred cCCceeeeeeecceEEEEeechhHHHHHHH-HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHH
Q 024641 50 MGSGTVACGVKEGVKLYFYNIRAAHVERAR-NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQ 118 (265)
Q Consensus 50 mgsGtlACavKEGVKLY~ynIRs~hvE~~R-~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQ 118 (265)
-|..|+-|.- +| +.|+++....-+-.+= =..+-..+.-.+.||+++.||+..|.-.-.+||.++.++
T Consensus 185 KG~~t~I~~~-~g-~~~~~~~g~~~lat~GsGDvLaGiIa~~lAq~~~~~~Aa~~a~~lh~~aa~~~~~~ 252 (275)
T d1kyha_ 185 KGNQTVIAFP-DG-DCWLNPTGNGALAKGGTGDTLTGMILGMLCCHEDPKHAVLNAVYLHGACAELWTDE 252 (275)
T ss_dssp CSTTCEEECT-TS-CEEECCCCCGGGCSTTHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcceEEcC-CC-ceeecCCCCccccCCccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 5677766652 33 6788777655321110 134566788888999999999999999888999888765
No 40
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=28.83 E-value=11 Score=26.39 Aligned_cols=38 Identities=18% Similarity=0.286 Sum_probs=27.4
Q ss_pred eccCCceeeee---eecceEEEEeechhHHHHHHHHHHHHH
Q 024641 48 FDMGSGTVACG---VKEGVKLYFYNIRAAHVERARNVAIEK 85 (265)
Q Consensus 48 FDmgsGtlACa---vKEGVKLY~ynIRs~hvE~~R~~A~e~ 85 (265)
+|+||||=.-+ ++.|.+++--.|-+..++.+|+++.+.
T Consensus 42 LDiGcG~G~~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~ 82 (226)
T d1ve3a1 42 LDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSR 82 (226)
T ss_dssp EEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred EEECCCcchhhhhHhhhhcccccccccccchhhhhhhhccc
Confidence 59999984322 366778888888777777777776554
No 41
>d1o91a_ b.22.1.1 (A:) Collagen NC1 trimerisation domain {Mouse (Mus musculus), isoform VIII [TaxId: 10090]}
Probab=28.50 E-value=13 Score=25.79 Aligned_cols=30 Identities=20% Similarity=0.527 Sum_probs=25.2
Q ss_pred eeeeeeeccCCceeeeeeecceEEEEeechh
Q 024641 42 FTILNCFDMGSGTVACGVKEGVKLYFYNIRA 72 (265)
Q Consensus 42 FT~~nCFDmgsGtlACavKEGVKLY~ynIRs 72 (265)
|...||||+.+|...|.+ .|+=+..+++++
T Consensus 27 ~N~g~~yntstg~FTaPv-aG~Y~f~~~~~~ 56 (131)
T d1o91a_ 27 YNGRQNYNPQTGIFTCEV-PGVYYFAYHVHC 56 (131)
T ss_dssp EEETTCEETTTTEEECCS-CEEEEEEEEEEE
T ss_pred ECCCCCeeCCCCEEEccc-ceEEEEEEEEEc
Confidence 566789999999999997 788888888864
No 42
>d2q09a2 c.1.9.17 (A:66-366) Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 {Environmental samples}
Probab=28.32 E-value=23 Score=23.62 Aligned_cols=21 Identities=24% Similarity=0.297 Sum_probs=17.0
Q ss_pred hcCCChHHHHHHHHHHHHHHH
Q 024641 92 SQGLSSNDAAKQAQKEGAKAA 112 (265)
Q Consensus 92 ~qGls~~eaAk~Aqk~g~kAA 112 (265)
..||||.||-+.|=..++|+-
T Consensus 273 ~~glt~~eal~~aT~~~A~~l 293 (301)
T d2q09a2 273 LFGLTPVEAMAGVTRHAARAL 293 (301)
T ss_dssp HHCCCHHHHHHHTTHHHHHHT
T ss_pred HcCCCHHHHHHHHHHHHHHHh
Confidence 469999999988877777664
No 43
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}
Probab=28.17 E-value=14 Score=28.56 Aligned_cols=37 Identities=22% Similarity=0.164 Sum_probs=28.9
Q ss_pred eccCCce------eeeeeecceEEEEeechhHHHHHHHHHHHH
Q 024641 48 FDMGSGT------VACGVKEGVKLYFYNIRAAHVERARNVAIE 84 (265)
Q Consensus 48 FDmgsGt------lACavKEGVKLY~ynIRs~hvE~~R~~A~e 84 (265)
.|+|||+ |+-...++.+++.-.+-..-++.||+++-+
T Consensus 32 LDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~ 74 (281)
T d2gh1a1 32 VDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRL 74 (281)
T ss_dssp EEETCTTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHS
T ss_pred EEecCcCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccc
Confidence 6999987 344456788998889988889999887644
No 44
>d2bbaa1 b.18.1.4 (A:17-196) Ephrin type-B receptor 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.47 E-value=12 Score=30.01 Aligned_cols=27 Identities=30% Similarity=0.878 Sum_probs=23.2
Q ss_pred ceeeeeeeccCCceeeeeeecceEEEEee
Q 024641 41 KFTILNCFDMGSGTVACGVKEGVKLYFYN 69 (265)
Q Consensus 41 kFT~~nCFDmgsGtlACavKEGVKLY~yn 69 (265)
|||+-+|-++......| ||--.||.|-
T Consensus 75 ~FtvRdC~s~p~~~~sC--KETFnLyy~e 101 (180)
T d2bbaa1 75 RFTMLECLSLPRAGRSC--KETFTVFYYE 101 (180)
T ss_dssp EEEEBCGGGSTTCCTTC--CSEEEEEEEE
T ss_pred EEEEecccCCCCCCCcC--cCeeeEEEEE
Confidence 79999999997666667 8999999985
No 45
>d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]}
Probab=25.97 E-value=32 Score=26.30 Aligned_cols=36 Identities=22% Similarity=0.265 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHH
Q 024641 80 NVAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLA 115 (265)
Q Consensus 80 ~~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA 115 (265)
=-..-.||.-.+.+|++..||.++|+.--.+|-|.+
T Consensus 209 Gd~~asaia~~La~G~~l~~Av~~A~~~v~~~i~~a 244 (258)
T d1ub0a_ 209 GCTLSAAIAALLAKGRPLAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 457888999999999999999999998766665443
No 46
>d1z6ra3 c.55.1.10 (A:211-406) Mlc protein {Escherichia coli [TaxId: 562]}
Probab=25.73 E-value=38 Score=23.98 Aligned_cols=50 Identities=24% Similarity=0.286 Sum_probs=39.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCccce
Q 024641 95 LSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTITE 145 (265)
Q Consensus 95 ls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~tE 145 (265)
++.++- .++.+.++..|+..-.++=+.+|-.|+.-...| |.+..||.+.+
T Consensus 85 ~~~~~~-~~~~~~gd~~a~~i~~~~~~~la~~i~~l~~~ldP~~IvigG~~~~ 136 (196)
T d1z6ra3 85 LTVDSL-CQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSK 136 (196)
T ss_dssp CCHHHH-HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGG
T ss_pred CCHHHH-HHHHHccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecchhh
Confidence 444444 456667888899899999999999999888887 78999998875
No 47
>d1shwb_ b.18.1.4 (B:) Ligand-binding domain of the ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.14 E-value=17 Score=29.12 Aligned_cols=27 Identities=37% Similarity=0.807 Sum_probs=23.4
Q ss_pred ceeeeeeeccCCceeeeeeecceEEEEee
Q 024641 41 KFTILNCFDMGSGTVACGVKEGVKLYFYN 69 (265)
Q Consensus 41 kFT~~nCFDmgsGtlACavKEGVKLY~yn 69 (265)
|||+-+|-++......| ||--.||.|-
T Consensus 73 ~FtvRdC~s~p~~~~sC--KETFnLyy~e 99 (181)
T d1shwb_ 73 KFSVRDCSSIPSVPGSC--KETFNLYYYE 99 (181)
T ss_dssp EEEEECGGGSSSCCSCC--BSEEEEEEEE
T ss_pred EEEEeccccCCCCCCcC--cCeeEEEEEe
Confidence 79999999998766677 8999999984
No 48
>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=25.00 E-value=11 Score=30.38 Aligned_cols=52 Identities=15% Similarity=0.176 Sum_probs=38.4
Q ss_pred HHhccccccccCceeeeeeeccCCce--ee--eeeecceEEEEeechhHHHHHHHHHHHH
Q 024641 29 QLVGEDASSQSGKFTILNCFDMGSGT--VA--CGVKEGVKLYFYNIRAAHVERARNVAIE 84 (265)
Q Consensus 29 ~LVGee~sSkSGkFT~~nCFDmgsGt--lA--CavKEGVKLY~ynIRs~hvE~~R~~A~e 84 (265)
++|-+..--+.|. ...|+|||. +| .+-+-|+++=.-+|=..+++.+|+++-+
T Consensus 52 ~~~~~~l~l~~G~----~VLDiGCG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~ 107 (285)
T d1kpga_ 52 DLALGKLGLQPGM----TLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVAN 107 (285)
T ss_dssp HHHHTTTTCCTTC----EEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCCC----EEEEecCcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHh
Confidence 3444445556664 367999974 44 4777899999999999999999988754
No 49
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.95 E-value=23 Score=25.61 Aligned_cols=38 Identities=16% Similarity=0.184 Sum_probs=26.1
Q ss_pred eeeccCCce----eeeeeecceEEEEeechhHHHHHHHHHHH
Q 024641 46 NCFDMGSGT----VACGVKEGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 46 nCFDmgsGt----lACavKEGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
...|+|||+ +-.+.+-+.+++--.|=..-++.+|+++-
T Consensus 54 ~vLDlGcG~G~~~~~~~~~~~~~v~giD~S~~~i~~a~~~~~ 95 (257)
T d2a14a1 54 TLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLK 95 (257)
T ss_dssp EEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEECCCCCHhHHHHhccccCcEEEecCCHHHHHHHHHHHh
Confidence 378999997 33444445567777777777888877753
No 50
>d1pk6c_ b.22.1.1 (C:) Complement c1q globular head, C chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.88 E-value=13 Score=25.65 Aligned_cols=30 Identities=20% Similarity=0.464 Sum_probs=24.6
Q ss_pred eeeeeeeccCCceeeeeeecceEEEEeechh
Q 024641 42 FTILNCFDMGSGTVACGVKEGVKLYFYNIRA 72 (265)
Q Consensus 42 FT~~nCFDmgsGtlACavKEGVKLY~ynIRs 72 (265)
|..-||||..+|...|-+. |+=+..++|+.
T Consensus 29 ~N~G~~yd~stg~FTaPv~-G~Y~F~~~~~~ 58 (129)
T d1pk6c_ 29 TNPQGDYDTSTGKFTCKVP-GLYYFVYHASH 58 (129)
T ss_dssp ECTTCCEETTTTEEECSSC-EEEEEEEEEEE
T ss_pred ECCCCCccCCCCEEECCcC-CEEEEEEEeec
Confidence 4456899999999999975 88888888865
No 51
>d2ap1a1 c.55.1.10 (A:118-303) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]}
Probab=24.46 E-value=86 Score=21.46 Aligned_cols=64 Identities=9% Similarity=0.121 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhh--hhhhhcCccce
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFF--EAIYYGGTITE 145 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfF--EalYyGGt~tE 145 (265)
+++++.......+.++..+- .++.+.+++.|+..-+++=+.+|..|+.-..+| |++..||.+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~-~~~~~~gd~~a~~i~~~~~~~la~~i~nl~~~ldPe~IvlGG~i~~ 140 (186)
T d2ap1a1 75 RGFAWLYQHYYDQSLQAPEI-IALWEQGDEQAHAHVERYLDLLAVCLGNILTIVDPDLLVIGGGLSN 140 (186)
T ss_dssp HHHHHHHHHHHCCCCCHHHH-HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGG
T ss_pred hhHHHHhhhccccccchhhH-HHHHHhccchHHHHHHHHHHHHHHHHHHHHHHcCcCEEEECCchhh
Confidence 45555555555566666655 455667888888999999999999999887774 78999998764
No 52
>d1kkha1 d.14.1.5 (A:1-180) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=24.01 E-value=44 Score=23.32 Aligned_cols=49 Identities=22% Similarity=0.192 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhcchhhhhhhhhcCcc
Q 024641 81 VAIEKAVVDALSQGLSSNDAAKQAQKEGAKAAKLAKRQAKRIIGPIIAAGWDFFEAIYYGGTI 143 (265)
Q Consensus 81 ~A~e~AL~da~~qGls~~eaAk~Aqk~g~kAAKlA~rQAkRI~GPiissgWDfFEalYyGGt~ 143 (265)
-|+-.||.+.....++..|-++.|+ ++.+.+.+ -++|-|-.=++ |||-+
T Consensus 122 va~~~al~~~~~~~l~~~~l~~la~------------~~E~~~~g-~~sg~D~~~~~-~Gg~i 170 (180)
T d1kkha1 122 IGTIKAVSGFYNKELKDDEIAKLGY------------MVEKEIQG-KASITDTSTIT-YKGIL 170 (180)
T ss_dssp HHHHHHHHHTTTCCCCHHHHHHHHH------------HHHHHHSS-SCCSHHHHHHH-HCSEE
T ss_pred HHHHHHHHHHhCcCCCHHHHHHHHH------------HHHHHhCC-CCCHHHHHHHH-hCCEE
Confidence 3556677777777788766555443 45555555 38899998766 47753
No 53
>d2gy9t1 a.7.6.1 (T:4-86) Ribosomal protein S20 {Escherichia coli [TaxId: 562]}
Probab=23.67 E-value=39 Score=23.21 Aligned_cols=44 Identities=20% Similarity=0.172 Sum_probs=28.3
Q ss_pred chhHHHHHHHHHHHH-------HHHHHHHhcCC--ChHHHHHHHHHHHHHHHH
Q 024641 70 IRAAHVERARNVAIE-------KAVVDALSQGL--SSNDAAKQAQKEGAKAAK 113 (265)
Q Consensus 70 IRs~hvE~~R~~A~e-------~AL~da~~qGl--s~~eaAk~Aqk~g~kAAK 113 (265)
||-....+.|++++. +.+.+|+..|- ...++.+.|++.-++|++
T Consensus 7 ~rq~~kr~~~N~~~kS~~rT~iKk~~~ai~~~d~~~a~~~~~~a~s~iDkaa~ 59 (83)
T d2gy9t1 7 AIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAA 59 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 456666777777764 44556666662 223455778888888875
No 54
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}
Probab=23.12 E-value=20 Score=25.62 Aligned_cols=36 Identities=14% Similarity=0.267 Sum_probs=23.4
Q ss_pred eeccCCcee---eeeeecceEEEEeechhHHHHHHHHHH
Q 024641 47 CFDMGSGTV---ACGVKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 47 CFDmgsGtl---ACavKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
..|+|||+= .--.+.|.+++.--|...=++.++.++
T Consensus 34 vLDiGcG~G~~~~~la~~g~~v~gvD~s~~~l~~a~~~~ 72 (198)
T d2i6ga1 34 TLDLGCGNGRNSLYLAANGYDVTAWDKNPASMANLERIK 72 (198)
T ss_dssp EEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHhhhhccccCcHHHHHHHHHHh
Confidence 689999961 222467778777777666555555443
No 55
>d1pk6b_ b.22.1.1 (B:) Complement c1q globular head, B chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.84 E-value=20 Score=24.51 Aligned_cols=30 Identities=23% Similarity=0.505 Sum_probs=24.4
Q ss_pred eeeeeeeccCCceeeeeeecceEEEEeechh
Q 024641 42 FTILNCFDMGSGTVACGVKEGVKLYFYNIRA 72 (265)
Q Consensus 42 FT~~nCFDmgsGtlACavKEGVKLY~ynIRs 72 (265)
+..-+|||..+|...|.+ .|+=+..++|+.
T Consensus 29 ~n~g~~ydtstg~FTaPv-~G~Y~F~~~~~~ 58 (132)
T d1pk6b_ 29 TNMNNNYEPRSGKFTCKV-PGLYYFTYHASS 58 (132)
T ss_dssp EEETSCEETTTTEEECSS-CEEEEEEEEEEE
T ss_pred ECCCCcccCCCCeEEccc-CcEEEEEEEEEe
Confidence 455689999999999997 687777777764
No 56
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=22.46 E-value=15 Score=28.38 Aligned_cols=36 Identities=6% Similarity=0.072 Sum_probs=22.9
Q ss_pred eeeccCCceeeee------eecceEEEEeechhHHHHHHHHHH
Q 024641 46 NCFDMGSGTVACG------VKEGVKLYFYNIRAAHVERARNVA 82 (265)
Q Consensus 46 nCFDmgsGtlACa------vKEGVKLY~ynIRs~hvE~~R~~A 82 (265)
.++|+||||=..+ +.. -++|--.|-...++.++++|
T Consensus 77 ~VLDlGcGsG~~~~~la~~~~~-g~V~aVDiS~~~i~~a~~~a 118 (230)
T d1g8sa_ 77 KILYLGASAGTTPSHVADIADK-GIVYAIEYAPRIMRELLDAC 118 (230)
T ss_dssp EEEEESCCSSHHHHHHHHHTTT-SEEEEEESCHHHHHHHHHHT
T ss_pred EEEEeCEEcCHHHHHHHHhCCC-CEEEEEeCcHHHHHHHHHHH
Confidence 5899999984433 233 37777777766666555544
No 57
>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}
Probab=22.09 E-value=18 Score=26.71 Aligned_cols=48 Identities=21% Similarity=0.335 Sum_probs=35.8
Q ss_pred cCCceeeeeeecceEEEEeechhHHHHHHHHHHHHHHHHHHHhcCCChH
Q 024641 50 MGSGTVACGVKEGVKLYFYNIRAAHVERARNVAIEKAVVDALSQGLSSN 98 (265)
Q Consensus 50 mgsGtlACavKEGVKLY~ynIRs~hvE~~R~~A~e~AL~da~~qGls~~ 98 (265)
||+|--++.+.-|.+..+|.+-..-++++++++ ++.|.+.+..|....
T Consensus 15 mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i-~~~l~~~~~~~~~~~ 62 (186)
T d1wdka3 15 MGGGIAYQSASKGTPILMKDINEHGIEQGLAEA-AKLLVGRVDKGRMTP 62 (186)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH-HHHHHHHHTTTSSCH
T ss_pred HHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhh-hhhHHhhhcccccch
Confidence 455544466677999999999988889998885 677777777665543
No 58
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}
Probab=22.04 E-value=28 Score=24.68 Aligned_cols=41 Identities=12% Similarity=0.099 Sum_probs=30.4
Q ss_pred eeeccCCceeee---eeecceEEEEeechhHHHHHHHHHHHHHH
Q 024641 46 NCFDMGSGTVAC---GVKEGVKLYFYNIRAAHVERARNVAIEKA 86 (265)
Q Consensus 46 nCFDmgsGtlAC---avKEGVKLY~ynIRs~hvE~~R~~A~e~A 86 (265)
.+.|+|||+=.. ..+.|-+++.-.|-...++.||+++.+..
T Consensus 18 rVLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~ 61 (231)
T d1vl5a_ 18 EVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNG 61 (231)
T ss_dssp EEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT
T ss_pred EEEEecccCcHHHHHHHHhCCEEEEEECCHHHHhhhhhcccccc
Confidence 579999996322 14678888888888888888888776543
No 59
>d2vhla2 c.1.9.10 (A:58-358) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Bacillus subtilis [TaxId: 1423]}
Probab=21.77 E-value=20 Score=24.88 Aligned_cols=28 Identities=18% Similarity=0.076 Sum_probs=21.0
Q ss_pred HHHHh-cCCChHHHHHHHHHHHHHHHHHH
Q 024641 88 VDALS-QGLSSNDAAKQAQKEGAKAAKLA 115 (265)
Q Consensus 88 ~da~~-qGls~~eaAk~Aqk~g~kAAKlA 115 (265)
..++. .|||+.+|.+.+-...+|+-.+.
T Consensus 269 ~~~v~~~gls~~~a~~~~T~NpAk~lGL~ 297 (301)
T d2vhla2 269 RHMREFTNCSWTDIANITSENAAKQLGIF 297 (301)
T ss_dssp HHHHHHHCCCHHHHHHHHTHHHHHHHTCT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHhCCC
Confidence 34554 39999999999988888776543
No 60
>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}
Probab=21.55 E-value=34 Score=24.81 Aligned_cols=37 Identities=16% Similarity=0.142 Sum_probs=22.1
Q ss_pred eeccCCce--eee-eeecceEEEEeechhHHHHHHHHHHH
Q 024641 47 CFDMGSGT--VAC-GVKEGVKLYFYNIRAAHVERARNVAI 83 (265)
Q Consensus 47 CFDmgsGt--lAC-avKEGVKLY~ynIRs~hvE~~R~~A~ 83 (265)
.+|++||| ++. +.+.|.+..+.-+-..-++.+|+-+-
T Consensus 45 vLDl~~G~G~~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~ 84 (171)
T d1ws6a1 45 FLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVR 84 (171)
T ss_dssp EEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHH
T ss_pred EEEeccccchhhhhhhhccchhhhcccCHHHHhhhhHHHH
Confidence 45666665 443 34678888877666655555555443
No 61
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}
Probab=21.13 E-value=9 Score=26.58 Aligned_cols=43 Identities=16% Similarity=0.242 Sum_probs=35.8
Q ss_pred cCceeeeeeeccCCceeeeeeecceEEEEeechhHHHHHHHHH
Q 024641 39 SGKFTILNCFDMGSGTVACGVKEGVKLYFYNIRAAHVERARNV 81 (265)
Q Consensus 39 SGkFT~~nCFDmgsGtlACavKEGVKLY~ynIRs~hvE~~R~~ 81 (265)
|-|++++-|=-||+.--++..+.|...++|.++..++++.++.
T Consensus 1 sk~iaIiGaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~ 43 (184)
T d1bg6a2 1 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR 43 (184)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence 4577888777788777788889999999999999999988753
No 62
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}
Probab=20.32 E-value=27 Score=25.41 Aligned_cols=52 Identities=21% Similarity=0.157 Sum_probs=30.9
Q ss_pred HhccccccccCceeeeeeeccCCceee---eeeecceEEEEeechhHHHHHHHHHHHHH
Q 024641 30 LVGEDASSQSGKFTILNCFDMGSGTVA---CGVKEGVKLYFYNIRAAHVERARNVAIEK 85 (265)
Q Consensus 30 LVGee~sSkSGkFT~~nCFDmgsGtlA---CavKEGVKLY~ynIRs~hvE~~R~~A~e~ 85 (265)
|+-+-..=|+|+ ++ .|+||||=. -..+.+-+++---+=..-++.||+++-++
T Consensus 7 ~l~~~~~~~~~~-rI---LDiGcGtG~~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~ 61 (234)
T d1xxla_ 7 LMIKTAECRAEH-RV---LDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEK 61 (234)
T ss_dssp HHHHHHTCCTTC-EE---EEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCC-EE---EEeCCcCcHHHHHHHHhCCeEEEEeCChhhhhhhhhhhccc
Confidence 333344445565 23 699999722 22345666666666666777777766554
Done!