Your job contains 1 sequence.
>024642
MYEFSSATRKTIASLNSSMAMTYYYATKPTWKIVTTDCTCSISSCCFNFFSNVTNQHSKT
LHFTNLTHIIKNKCTWVIKAKGNDEAIAHVKEKKNDNAQTTSESVQIITKRPFWKRVLFA
SKKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVK
TRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGAIIPAHTWFG
VLISALGVGMLECSGSPPSVSIFKS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024642
(265 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q48AQ1 - symbol:CPS_0094 "Membrane protein" spe... 126 1.1e-05 1
TIGR_CMR|CPS_0094 - symbol:CPS_0094 "membrane protein" sp... 126 1.1e-05 1
UNIPROTKB|Q4KHB5 - symbol:PFL_1237 "Putative membrane pro... 121 3.6e-05 1
UNIPROTKB|Q3AES3 - symbol:CHY_0503 "Putative membrane pro... 117 0.00010 1
TIGR_CMR|CHY_0503 - symbol:CHY_0503 "putative membrane pr... 117 0.00010 1
>UNIPROTKB|Q48AQ1 [details] [associations]
symbol:CPS_0094 "Membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0697 HOGENOM:HOG000156003
RefSeq:YP_266862.1 STRING:Q48AQ1 GeneID:3521101 KEGG:cps:CPS_0094
PATRIC:21463607 OMA:YSTIAIF BioCyc:CPSY167879:GI48-197-MONOMER
Uniprot:Q48AQ1
Length = 322
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/142 (26%), Positives = 71/142 (50%)
Query: 121 SKKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWAR---- 176
S +I +I LL V I +PI A E+M +F A+RF ++ + LP +++ +
Sbjct: 5 SPRIATILLLIVCFIWGVEFVPI-DLAIEVMPTNTFNAIRFAVATLSMLPLLWFVQKKNK 63
Query: 177 ------DDVKTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLG 230
D V +G+ LG ++ +G++ + G+ + A FI+ V +VP+ ++
Sbjct: 64 GNSKPIDYVLLIRSGMLLGFFLFIGFYTQTEGMRFTTVTNAGFITGLCVPLVPVLGFLIF 123
Query: 231 A-IIPAHTWFGVLISALGVGML 251
++P W GV+ + G+ ML
Sbjct: 124 RNVVPKSVWIGVVTATAGLYML 145
>TIGR_CMR|CPS_0094 [details] [associations]
symbol:CPS_0094 "membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=ISS] InterPro:IPR000620
Pfam:PF00892 GO:GO:0016020 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG0697 HOGENOM:HOG000156003 RefSeq:YP_266862.1
STRING:Q48AQ1 GeneID:3521101 KEGG:cps:CPS_0094 PATRIC:21463607
OMA:YSTIAIF BioCyc:CPSY167879:GI48-197-MONOMER Uniprot:Q48AQ1
Length = 322
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/142 (26%), Positives = 71/142 (50%)
Query: 121 SKKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWAR---- 176
S +I +I LL V I +PI A E+M +F A+RF ++ + LP +++ +
Sbjct: 5 SPRIATILLLIVCFIWGVEFVPI-DLAIEVMPTNTFNAIRFAVATLSMLPLLWFVQKKNK 63
Query: 177 ------DDVKTRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLG 230
D V +G+ LG ++ +G++ + G+ + A FI+ V +VP+ ++
Sbjct: 64 GNSKPIDYVLLIRSGMLLGFFLFIGFYTQTEGMRFTTVTNAGFITGLCVPLVPVLGFLIF 123
Query: 231 A-IIPAHTWFGVLISALGVGML 251
++P W GV+ + G+ ML
Sbjct: 124 RNVVPKSVWIGVVTATAGLYML 145
>UNIPROTKB|Q4KHB5 [details] [associations]
symbol:PFL_1237 "Putative membrane protein" species:220664
"Pseudomonas protegens Pf-5" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0697 HOGENOM:HOG000156003
RefSeq:YP_258368.1 STRING:Q4KHB5 GeneID:3477414 KEGG:pfl:PFL_1237
PATRIC:19871683 OMA:STICAFL ProtClustDB:CLSK868107
BioCyc:PFLU220664:GIX8-1244-MONOMER Uniprot:Q4KHB5
Length = 301
Score = 121 (47.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 35/145 (24%), Positives = 70/145 (48%)
Query: 121 SKKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWAR---- 176
S+ +R+ L+ + +++ S + + P + +RF + ++ LP V
Sbjct: 3 SQALRADVLMLITAVIWGSAFVAQTSGMNHIGPFLYSGLRFALGSLCLLPLVLRKTPTDR 62
Query: 177 --DDVKTRN---AGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGA 231
+ + R G+ +GL ++LG ++ +GL+ + A FI+ VIVVPL ++G
Sbjct: 63 QPEPLLNRGLLLGGVLMGLALALGINLQQVGLMFTTVTNAGFITGLYVIVVPLLGLLIGH 122
Query: 232 IIPAHTWFGVLISALGVGMLECSGS 256
TW G +++ +G+ +L S S
Sbjct: 123 KTGLGTWLGAVLAVVGMFLLSVSDS 147
>UNIPROTKB|Q3AES3 [details] [associations]
symbol:CHY_0503 "Putative membrane protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0697
RefSeq:YP_359361.1 STRING:Q3AES3 GeneID:3727973 KEGG:chy:CHY_0503
PATRIC:21274157 HOGENOM:HOG000156003 OMA:LANIEPF
BioCyc:CHYD246194:GJCN-504-MONOMER Uniprot:Q3AES3
Length = 298
Score = 117 (46.2 bits), Expect = 0.00010, P = 0.00010
Identities = 34/132 (25%), Positives = 65/132 (49%)
Query: 121 SKKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVK 180
+K++ + L V+T + + I+K + P SF + RF++S LP + ++
Sbjct: 5 TKQLLADISLIVVTAFWGTTFVIIKNILANIEPFSFLSFRFLLSTFFLLPLLL-QKEGFS 63
Query: 181 TRNA--GIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGA--IIPAH 236
+ G G ++ LGY ++ +GL + A + FI+ V++VP+ +L + P
Sbjct: 64 PKGVFFGSIAGFFLWLGYILQTIGLKYTSAANSGFITGLAVVMVPVLSSILNKKPVTPG- 122
Query: 237 TWFGVLISALGV 248
FG +S LG+
Sbjct: 123 VIFGTGLSFLGL 134
>TIGR_CMR|CHY_0503 [details] [associations]
symbol:CHY_0503 "putative membrane protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0697 RefSeq:YP_359361.1
STRING:Q3AES3 GeneID:3727973 KEGG:chy:CHY_0503 PATRIC:21274157
HOGENOM:HOG000156003 OMA:LANIEPF BioCyc:CHYD246194:GJCN-504-MONOMER
Uniprot:Q3AES3
Length = 298
Score = 117 (46.2 bits), Expect = 0.00010, P = 0.00010
Identities = 34/132 (25%), Positives = 65/132 (49%)
Query: 121 SKKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFVFWARDDVK 180
+K++ + L V+T + + I+K + P SF + RF++S LP + ++
Sbjct: 5 TKQLLADISLIVVTAFWGTTFVIIKNILANIEPFSFLSFRFLLSTFFLLPLLL-QKEGFS 63
Query: 181 TRNA--GIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGMLGA--IIPAH 236
+ G G ++ LGY ++ +GL + A + FI+ V++VP+ +L + P
Sbjct: 64 PKGVFFGSIAGFFLWLGYILQTIGLKYTSAANSGFITGLAVVMVPVLSSILNKKPVTPG- 122
Query: 237 TWFGVLISALGV 248
FG +S LG+
Sbjct: 123 VIFGTGLSFLGL 134
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.135 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 265 244 0.00098 113 3 11 22 0.37 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 606 (64 KB)
Total size of DFA: 183 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.34u 0.08s 17.42t Elapsed: 00:00:01
Total cpu time: 17.34u 0.08s 17.42t Elapsed: 00:00:01
Start: Fri May 10 17:15:56 2013 End: Fri May 10 17:15:57 2013