BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024647
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55EX9|Y8948_DICDI Putative methyltransferase DDB_G0268948 OS=Dictyostelium discoideum
GN=DDB_G0268948 PE=1 SV=2
Length = 263
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 131/258 (50%), Gaps = 21/258 (8%)
Query: 9 AKQYAETRPNYPEELFKFITSKTT-NHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQ 67
+K Y RP Y +EL+ I S +LA D+G GSGQA L+ F+ VIG E S Q
Sbjct: 19 SKSYKNFRPTYNDELYSIIDSHCDEKRDLAIDIGAGSGQATVRLAKYFKKVIGFEPSQGQ 78
Query: 68 IEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLK 127
IE A K N+ Y L++ E+ +VDL+T+AQA HWF+LP FY + K +L+
Sbjct: 79 IENAEKTDNVEYRLSAA-------EKIDLPSGSVDLITVAQAAHWFNLPVFYEESKRLLR 131
Query: 128 KPNGVIATWCYTVPEVNVSVDAVF---QPFYTVDSDPFWEPQRKLVDNKYMTIDFPFEPV 184
+ NG + W Y + ++ + DA + +Y D +W P+RK +D++Y+ I FE
Sbjct: 132 E-NGSLIIWSYGLMKITNNNDAQVVHEKHYYETIGDQYWAPERKYIDDEYVDIKPSFENT 190
Query: 185 DGADSTGPFDRFVIEKTMDLEGYFSYIRSWSAYQTAKDKGVELLTENVIENFRRAWN-ED 243
+ P K+M + Y SWS Y G + + + E +A+ D
Sbjct: 191 TRKTISLP-------KSMSINDMIGYYSSWSGYAAFIKAGNKDVLPEIKETLLKAYKTTD 243
Query: 244 GQSRKV-VRFPIYLRIGK 260
G S+ + V FP+Y+ + K
Sbjct: 244 GDSKLIDVNFPVYMILSK 261
>sp|P38892|CRG1_YEAST Probable S-adenosylmethionine-dependent methyltransferase CRG1
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=CRG1 PE=1 SV=1
Length = 291
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 46/249 (18%)
Query: 8 QAKQYAETRPNYP----EELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTET 63
++ Y RP+YP E+ KF K T L D+G G+G+A + F+ VIG +
Sbjct: 12 ESAHYNNVRPSYPLSLVNEIMKF--HKGTRKSLV-DIGCGTGKATFVVEPYFKEVIGIDP 68
Query: 64 SPKQIEFATKLPN-------IRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLP 116
S + A K N IR+ + +P ++ + +VD+V A+A+HW +L
Sbjct: 69 SSAMLSIAEKETNERRLDKKIRF-INAPGEDLSSIRP-----ESVDMVISAEAIHWCNLE 122
Query: 117 QFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVFQPFYTVDSDPFW------------- 163
+ + QV +L+ +G A W Y PE V +Y +
Sbjct: 123 RLFQQVSSILRS-DGTFAFWFYIQPEF-VDFPEALNVYYKYGWSKDYMGKYLNDNQREIL 180
Query: 164 -----EPQRKLVDNKY----MTIDFPFEPVDGADSTGPFDRFVIEKTMDLEGYFSYIRSW 214
E R L+ +++ +TI P +P + + T +F+ + L + +++SW
Sbjct: 181 LNYGGEKLRSLLSDRFGDIEVTIYSPSDP-NASTVTAENSQFLWRAAITLNQFKEFVKSW 239
Query: 215 SAYQT-AKD 222
S Y + A+D
Sbjct: 240 SIYTSWARD 248
>sp|A6ZRD1|TMT1_YEAS7 Trans-aconitate 3-methyltransferase OS=Saccharomyces cerevisiae
(strain YJM789) GN=TMT1 PE=3 SV=1
Length = 299
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 110/264 (41%), Gaps = 42/264 (15%)
Query: 35 ELAWDVGTGSGQAAASLS---GIFENVIGTETSPKQIEFATKLP--------NIRYELTS 83
+L DVG G G A ++ FE +IG++ S I+ A + N+ ++++S
Sbjct: 38 KLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISS 97
Query: 84 PAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT---V 140
+ L + + +D++T + HWFD +F L+K +G IA W Y
Sbjct: 98 -SDDFKFLGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRK-DGTIAIWGYADPIF 155
Query: 141 PEVNVSVDAVFQ-PFYTVDSDPFWE-PQRKLVDNKYMTIDFPFEP-------------VD 185
P+ D + + P+ P+WE P R + N M D +P D
Sbjct: 156 PDYPEFDDLMIEVPYGKQGLGPYWEQPGRSRLRN--MLKDSHLDPELFHDIQVSYFCAED 213
Query: 186 GADSTGPFDR----FVIEKTMDLEGYFSYIRSWSAY----QTAKDKGVELLTENVI-ENF 236
D +I K + L + Y+R+WSAY Q K+K E + + I E+
Sbjct: 214 VRDKVKLHQHTKKPLLIRKQVTLMEFADYVRTWSAYHQWKQDPKNKDKEDVADWFIKESL 273
Query: 237 RRAWNEDGQSRKVVRFPIYLRIGK 260
RR ++ V + + ++GK
Sbjct: 274 RRRPELSTNTKIEVVWNTFYKLGK 297
>sp|P32643|TMT1_YEAST Trans-aconitate 3-methyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TMT1 PE=1 SV=1
Length = 299
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 110/264 (41%), Gaps = 42/264 (15%)
Query: 35 ELAWDVGTGSGQAAASLS---GIFENVIGTETSPKQIEFATKLP--------NIRYELTS 83
+L DVG G G A ++ FE +IG++ S I+ A + N+ ++++S
Sbjct: 38 KLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISS 97
Query: 84 PAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT---V 140
+ L + + +D++T + HWFD +F L+K +G IA W Y
Sbjct: 98 -SDDFKFLGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRK-DGTIAIWGYADPIF 155
Query: 141 PEVNVSVDAVFQ-PFYTVDSDPFWE-PQRKLVDNKYMTIDFPFEP-------------VD 185
P+ D + + P+ P+WE P R + N M D +P D
Sbjct: 156 PDYPEFDDLMIEVPYGKQGLGPYWEQPGRSRLRN--MLKDSHLDPELFHDIQVSYFCAED 213
Query: 186 GADSTGPFDR----FVIEKTMDLEGYFSYIRSWSAY----QTAKDKGVELLTENVI-ENF 236
D +I K + L + Y+R+WSAY Q K+K E + + I E+
Sbjct: 214 VRDKVKLHQHTKKPLLIRKQVTLVEFADYVRTWSAYHQWKQDPKNKDKEDVADWFIKESL 273
Query: 237 RRAWNEDGQSRKVVRFPIYLRIGK 260
RR ++ V + + ++GK
Sbjct: 274 RRRPELSTNTKIEVVWNTFYKLGK 297
>sp|P65349|Y3374_MYCBO Uncharacterized methyltransferase Mb3374 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb3374 PE=3 SV=1
Length = 243
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 9/131 (6%)
Query: 1 MAELFIKQAKQYAETRPNYPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIG 60
M+ F Y RP+YP E ++ L D+G G+G+ L +V+
Sbjct: 8 MSLSFGSAVGAYERGRPSYPPEAIDWLLPAAARRVL--DLGAGTGKLTTRLVERGLDVVA 65
Query: 61 TETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQFYN 120
+ P+ ++ +R L + E+ ++VD V +AQA HW D +
Sbjct: 66 VDPIPEMLDV------LRAALPQTVALLGTAEEIPLDDNSVDAVLVAQAWHWVDPARAIP 119
Query: 121 QVKWVLKKPNG 131
+V VL +P G
Sbjct: 120 EVARVL-RPGG 129
>sp|P65348|Y3342_MYCTU Uncharacterized methyltransferase Rv3342/MT3445 OS=Mycobacterium
tuberculosis GN=Rv3342 PE=3 SV=1
Length = 243
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 9/131 (6%)
Query: 1 MAELFIKQAKQYAETRPNYPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIG 60
M+ F Y RP+YP E ++ L D+G G+G+ L +V+
Sbjct: 8 MSLSFGSAVGAYERGRPSYPPEAIDWLLPAAARRVL--DLGAGTGKLTTRLVERGLDVVA 65
Query: 61 TETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQFYN 120
+ P+ ++ +R L + E+ ++VD V +AQA HW D +
Sbjct: 66 VDPIPEMLDV------LRAALPQTVALLGTAEEIPLDDNSVDAVLVAQAWHWVDPARAIP 119
Query: 121 QVKWVLKKPNG 131
+V VL +P G
Sbjct: 120 EVARVL-RPGG 129
>sp|Q9UTA9|YL89_SCHPO Uncharacterized methyltransferase C25B8.09 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC25B8.09 PE=3 SV=1
Length = 251
Score = 44.3 bits (103), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 12 YAETRPNYPEELFKFITSKTTNHELA--WDVGTGSGQAAASL-SGIFENVIGTETSPKQI 68
Y RP+YP ++ +++ + + +E + ++G GSG+ + + + +I +T + +
Sbjct: 13 YETARPDYPPQITEWLNDEFSVNETSTILELGAGSGKLTPRIIASQPKEIIAVDTYVEML 72
Query: 69 E-FATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLK 127
+ K PN+ + S AM+I LE +VDLV Q HWF + ++ VL
Sbjct: 73 DVLKKKFPNVDCRVGS-AMAIP-LED-----ESVDLVACGQCFHWFANEEALKEIYRVL- 124
Query: 128 KPNGVIA 134
KPNG +A
Sbjct: 125 KPNGKLA 131
>sp|Q9UTA8|YL8A_SCHPO Uncharacterized methyltransferase-like C25B8.10
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC25B8.10 PE=3 SV=1
Length = 256
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 5 FIKQAKQYAETRPNYPEELFKFITSKTTNHE--LAWDVGTGSGQAAASLSGIF-ENVIGT 61
F Y RP YP + +IT + E + ++G G+G+ + + +I
Sbjct: 10 FKTDVADYEAARPEYPIGITDWITDEFLIDETSIILELGAGTGKFTPRIIASHPKEIIAV 69
Query: 62 ETSPKQIE-FATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQFYN 120
+ P+ ++ K PN+ S AM+I LE +VDLV AQ HWF +
Sbjct: 70 DVYPEMLDVLRKKFPNVDCRAGS-AMAIP-LEDE-----SVDLVLCAQCFHWFANEEAMK 122
Query: 121 QVKWVLKKPNGVIA 134
++ VL KPNG +
Sbjct: 123 EIYRVL-KPNGKLG 135
>sp|A3KP37|NDUF5_DANRE NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor
5 OS=Danio rerio GN=ndufaf5 PE=2 SV=1
Length = 321
Score = 38.1 bits (87), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 36 LAWDVGTGSGQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTS--PAMSIAELE 92
LA DVG G A LS + E + T+ S ++R TS PA + E
Sbjct: 72 LALDVGCGRSHIAEHLSKEVVERLFLTDISSS---------SLRNRKTSDIPAQCVMADE 122
Query: 93 QNVA-AQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGV 132
+ + ++T DLV + +MHW DLP Q+ VL KP+GV
Sbjct: 123 EFLPFKENTFDLVLSSLSMHWINDLPGALRQIHQVL-KPDGV 163
>sp|B1LXF6|TAM_METRJ Trans-aconitate 2-methyltransferase OS=Methylobacterium
radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)
GN=tam PE=3 SV=1
Length = 260
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 21/109 (19%)
Query: 35 ELAWDVGTGSGQAAASLSGIFEN--VIGTETSPKQIEFA-TKLPNIRYELTSPAMSIAEL 91
LA D+G G G + A ++ F + VIG +TSP +E A +LP + + L A E
Sbjct: 33 RLAIDLGCGPGNSTALIAARFPDAEVIGLDTSPAMLESARARLPRLAFALADAATWTPE- 91
Query: 92 EQNVAAQSTVDLVTIAQAMHWFD-----LPQFYNQVKWVLKKPNGVIAT 135
DL+ + W LP+ + L P GV+A
Sbjct: 92 -------RAPDLIYANAVLQWLPDHATLLPRLFG-----LLAPGGVLAV 128
>sp|P36566|SMTA_ECOLI Protein SmtA OS=Escherichia coli (strain K12) GN=smtA PE=1 SV=2
Length = 261
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 39 DVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAA- 97
D G G GQ A ++ VI + S + I+ A + + ++ I Q+VA+
Sbjct: 50 DAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAK-GVSDNMQFIHCAAQDVASH 108
Query: 98 -QSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138
++ VDL+ + W P+ Q W + +P GV++ Y
Sbjct: 109 LETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFY 150
>sp|E4QJB8|BIOC_METS6 Malonyl-CoA O-methyltransferase BioC OS=Methylovorus sp. (strain
MP688) GN=bioC PE=3 SV=1
Length = 296
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 39 DVGTGSGQAAASLSGIFE--NVIGTETSP---KQIEFATKLPNIRYELTSPAMSIAELEQ 93
D G G+G A+A+LS + VI + + K+ A L + A++E+
Sbjct: 54 DAGCGTGHASAALSARYRQSQVISLDIAMGMLKKTMAARSLVQRLFGFDRRHAVCADIER 113
Query: 94 NVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVI 133
A +++DLV A+ W DL Q + +++ VL KP G++
Sbjct: 114 LPLAAASIDLVWSNMAIQWCNDLDQAFGEIQRVL-KPEGLL 153
>sp|Q73JU8|RSMG_TREDE Ribosomal RNA small subunit methyltransferase G OS=Treponema
denticola (strain ATCC 35405 / CIP 103919 / DSM 14222)
GN=rsmG PE=3 SV=1
Length = 254
Score = 35.4 bits (80), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 18/174 (10%)
Query: 12 YAETRPNYPEELFKFITSKTTNHELA-------WDVGTGSGQAAASLSGIFENVIGTETS 64
Y ET+ + +K TN L D GTG+G L+ +F ++ +
Sbjct: 79 YNETKNTESKTSLNNAETKNTNEALLTSEPFYIADAGTGAGFPGVPLAALFISLGNLDVK 138
Query: 65 PKQIEFATK----LPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQFYN 120
IE K L NI+ L I E E A Q+ D+VT +A H D +
Sbjct: 139 LSLIERMQKRCTFLENIKAVLQLNNTEIIESEAEKAPQNKFDIVT-CRAFHTLD--KHIL 195
Query: 121 QVKWVLKKPNGVIATWCYTVPEVNVSVDAVFQPFYTVDSD----PFWEPQRKLV 170
Q L KP G + + ++N + + + ++ PF + +R L+
Sbjct: 196 QTLLNLAKPKGKLFLYKAAKEKINEETELIKKEGLNYKTEKLDVPFLKKERHLL 249
>sp|Q47C02|BIOC_DECAR Malonyl-CoA O-methyltransferase BioC OS=Dechloromonas aromatica
(strain RCB) GN=bioC PE=3 SV=1
Length = 262
Score = 35.4 bits (80), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 39 DVGTGSGQAAASLSGIFENV--IGTETSPKQIEFATKLPNIRYELTSPAMSIA-ELEQNV 95
D G G+G A A+L F + + + SP ++ + +P +A +LE
Sbjct: 57 DAGCGTGYAQANLQTRFPDAHRVALDLSPGMLQ----------RVATPCCRVAGDLEHLP 106
Query: 96 AAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIA 134
A S++DL + A+ W DL + L +P GVIA
Sbjct: 107 LADSSLDLYWSSLAVQWCDLAVALREAHRTL-RPGGVIA 144
>sp|B5YD09|TRPA_DICT6 Tryptophan synthase alpha chain OS=Dictyoglomus thermophilum
(strain ATCC 35947 / DSM 3960 / H-6-12) GN=trpA PE=3
SV=1
Length = 253
Score = 34.7 bits (78), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 4 LFIKQAKQYAETRPNYPEELFKFIT--SKTTNHELAWDVGTGSGQAAASLSGIFENVI 59
L+ K R PEE FI+ K TN L W G GS SL G+ + VI
Sbjct: 169 LYCISVKGVTGERDRLPEEGVAFISRVKKETNKPLVWGFGLGSSYQINSLKGLVDGVI 226
>sp|C1D5S5|BIOC_LARHH Malonyl-CoA O-methyltransferase BioC OS=Laribacter hongkongensis
(strain HLHK9) GN=bioC PE=3 SV=1
Length = 297
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 39 DVGTGSGQAAASLSGIFENVIGTET--SPKQIEFA--TKLPNIRYE---LTSPAMSIAEL 91
D G+G+G A L + TE +P + + +LP R +PA+ A+L
Sbjct: 53 DAGSGTGYGAGLLRARYPEAQVTELDLAPSMLRASRDKQLPQGRLRRLFARAPALVCADL 112
Query: 92 EQNVAAQSTVDLVTIAQAMHWFDLP 116
EQ A ++D+V + A+ W + P
Sbjct: 113 EQLPLASGSLDMVWSSLALQWLNTP 137
>sp|Q2SBD7|BIOC_HAHCH Malonyl-CoA O-methyltransferase BioC OS=Hahella chejuensis (strain
KCTC 2396) GN=bioC PE=3 SV=1
Length = 279
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 39 DVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVA 96
DVG G+G L F + + SP IE+A ++ + ++A++E
Sbjct: 68 DVGCGTGWLTHRLKNSFPEARLCAYDLSPGMIEYALA----HHDNVAEIWAVADMESLPV 123
Query: 97 AQSTVDLVTIAQAMHWFDLPQ-FYNQVKWVLKKPNGVIAT 135
A ++ DLV AM W D P+ ++ + VL+ +I +
Sbjct: 124 ANASQDLVFSNMAMQWLDDPRAWFAEASRVLRPGGRLICS 163
>sp|Q482G8|UBIG_COLP3 3-demethylubiquinone-9 3-methyltransferase OS=Colwellia
psychrerythraea (strain 34H / ATCC BAA-681) GN=ubiG PE=3
SV=1
Length = 246
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 8/136 (5%)
Query: 39 DVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQ 98
DVG G G + SL+ + NV G + + + A KL + ++ I E+ +
Sbjct: 68 DVGCGGGILSESLAKLGANVTGIDMGTEPLNVA-KLHALETGVSINYQKITAEEKALENP 126
Query: 99 STVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVI--ATWCYTVPEVNVSVDAV-----F 151
T D+VT + + P Q L KP G+I +T ++ +++ A
Sbjct: 127 GTFDVVTCMEMLEHVPDPASVIQACSTLVKPGGLIFFSTLNKSIKSYLLAILAAEKLLKI 186
Query: 152 QPFYTVDSDPFWEPQR 167
P T D D F P +
Sbjct: 187 VPDGTHDHDKFIRPSQ 202
>sp|A7I176|ATPG_CAMHC ATP synthase gamma chain OS=Campylobacter hominis (strain ATCC
BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=atpG PE=3
SV=1
Length = 296
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 171 DNKYMTIDFPFEPVDGADSTGPFDRFVIEKTMDLEGYFSYIRSWSAYQTAKDKGVELLTE 230
+N Y+ + FEP DG D+ R + +K + Y+S I S +A +A+ +E T
Sbjct: 204 ENSYVGSNMEFEPSDGGDN---IIRTLTKKYFEYSMYYSLIDSLAAEHSARMNAMENATN 260
Query: 231 NVIENFRRAWNEDGQSRK 248
N E + E ++R+
Sbjct: 261 NAKERLSQLNLEYNKARQ 278
>sp|Q7MVG9|Y1095_PORGI Uncharacterized RNA methyltransferase PG_1095 OS=Porphyromonas
gingivalis (strain ATCC BAA-308 / W83) GN=PG_1095 PE=3
SV=1
Length = 465
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 9 AKQYAETRPNYPEELFKFIT--SKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPK 66
AK + +T +L++ + T EL +D+ TG+G A ++G VIG E P+
Sbjct: 288 AKSFYQTNSRQAYQLYRIAREFAGLTGDELVYDLYTGTGTIANFVAGQAHRVIGIEYVPE 347
Query: 67 QIEFA 71
IE A
Sbjct: 348 AIEDA 352
>sp|Q7MUB2|BIOC_PORGI Malonyl-CoA O-methyltransferase BioC OS=Porphyromonas gingivalis
(strain ATCC BAA-308 / W83) GN=bioC PE=3 SV=1
Length = 255
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 55/140 (39%), Gaps = 17/140 (12%)
Query: 2 AELFIKQ-------AKQYAETRPNYPEELFKFITSKTTNH-ELAWDVGTGSGQAAASLSG 53
+EL IK+ ++YA + E L +T+ +H E + G G G
Sbjct: 12 SELVIKRFTSALPYYEKYAVAQHRIGERLADLLTATGRHHFEHVLEYGCGCG-------- 63
Query: 54 IFENVIGTETSPKQIEFATKLPNIR-YELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHW 112
++ + + KQ P Y SP A + + T DL+T A A W
Sbjct: 64 VYTRQLAQTVTVKQWTLNDLCPVCEEYIRVSPVSFYAGEAETMPHTDTYDLITSASAFQW 123
Query: 113 FDLPQFYNQVKWVLKKPNGV 132
F P+ + + L +P+G+
Sbjct: 124 FKDPESFIRTVAGLLRPDGI 143
>sp|O31474|YCGJ_BACSU Uncharacterized methyltransferase YcgJ OS=Bacillus subtilis (strain
168) GN=ycgJ PE=1 SV=2
Length = 253
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 28 TSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK------LPNIRYEL 81
T++ D+G G+G A + S + IG + + + +E A+ + N+R++
Sbjct: 32 TAECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQ 91
Query: 82 -TSPAMSIAELEQNVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKK 128
T+ ++ + + D++T A H F D+ + +V VLK+
Sbjct: 92 GTAESLPFPD--------DSFDIITCRYAAHHFSDVRKAVREVARVLKQ 132
>sp|Q7MT71|THIC_PORGI Phosphomethylpyrimidine synthase OS=Porphyromonas gingivalis
(strain ATCC BAA-308 / W83) GN=thiC PE=3 SV=1
Length = 587
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 97 AQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139
A+ VD TI + W +P ++ ++ + +IA WC T
Sbjct: 302 AEQGVDYFTIHAGLRWHHVPLTLRRLTGIVSRGGSIIANWCTT 344
>sp|B2RH34|THIC_PORG3 Phosphomethylpyrimidine synthase OS=Porphyromonas gingivalis
(strain ATCC 33277 / DSM 20709 / JCM 12257) GN=thiC PE=3
SV=1
Length = 587
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 97 AQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139
A+ VD TI + W +P ++ ++ + +IA WC T
Sbjct: 302 AEQGVDYFTIHAGLRWHHVPLTLRRLTGIVSRGGSIIANWCTT 344
>sp|Q7NBT5|SYT_MYCGA Threonine--tRNA ligase OS=Mycoplasma gallisepticum (strain R(low /
passage 15 / clone 2)) GN=thrS PE=3 SV=1
Length = 573
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 126 LKKPNGVIATWCYTVPEVNVSVDAVFQPFYTVDSDPFWEPQRKLVDNKYMTIDFPFEPVD 185
LK N +++ Y + +N + + TVD+ ++ P +LVDN + F F+ V
Sbjct: 75 LKIANQLLSDQPYLLELINEAKEKTVN-LATVDNHHYYLPMAQLVDNTKLVKAFNFQSVG 133
Query: 186 GADSTGPFDRFVI 198
GA G D V+
Sbjct: 134 GAYFKGDKDNLVM 146
>sp|Q6MCW9|PIMT_PARUW Protein-L-isoaspartate O-methyltransferase OS=Protochlamydia
amoebophila (strain UWE25) GN=pcm PE=3 SV=1
Length = 210
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 29 SKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK 73
++ T + ++GTGSG +AA LS + +V E PK E A K
Sbjct: 64 AQITPQDKVLEIGTGSGYSAAILSQLASHVYSMERYPKLAELAKK 108
>sp|O74529|YJ48_SCHPO Uncharacterized methyltransferase C70.08c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC70.08c PE=3 SV=1
Length = 260
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 6/107 (5%)
Query: 7 KQAKQYAETRPNYPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPK 66
K ++ A P +++ K I +++ L D+G G G L V+G + SP
Sbjct: 9 KDYQRNASFVPKLTKDIVKRINLSSSDELL--DLGCGDGVLTNELVSQCRRVVGIDASPD 66
Query: 67 QIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWF 113
I+ A +L Y + + L+ + + D+V A+HW
Sbjct: 67 MIKAARELGLNAYVIPGEKL----LDASEIPSESFDVVFSNAALHWI 109
>sp|O74421|COQ3_SCHPO Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=coq3 PE=3 SV=2
Length = 274
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 15 TRPNYPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL 74
TR ++ E+F+ + + D+G G G + S++ + +V + SP IE A K
Sbjct: 64 TRLDFMTEVFR--ERNCFSGKKILDIGCGGGILSESMARLGASVTAVDASPMAIEVAKKH 121
Query: 75 PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQ--FYNQVKWVLKKPNG- 131
++ L I + +T D+VT + + + P+ ++ ++ V KPNG
Sbjct: 122 ASLDPVLNGRLEYIHGSVEGSQLPTTFDVVTCMEVLEHVEQPRDFLFSLMEKV--KPNGR 179
Query: 132 -VIATWCYTV 140
V++T T+
Sbjct: 180 LVLSTISRTL 189
>sp|Q6LMT0|PYRG_PHOPR CTP synthase OS=Photobacterium profundum GN=pyrG PE=3 SV=1
Length = 545
Score = 31.2 bits (69), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 78 RYELTSPAMSIAELEQNVAAQST-VDLVTIAQAMHWFDLPQFYNQVKWVLK 127
R+ +T+P ++AE EQ + ++ D VTI + +LP Y V LK
Sbjct: 263 RFGITAPEANLAEWEQVIYEEANPTDEVTIGMVGKYIELPDAYKSVNEALK 313
>sp|Q7NPT8|YIDC_CHRVO Membrane protein insertase YidC OS=Chromobacterium violaceum
(strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 /
NCIMB 9131 / NCTC 9757) GN=yidC PE=3 SV=1
Length = 545
Score = 30.8 bits (68), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 55 FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFD 114
+ G ++ +++AT P ++ P + E E N+ ++ D + A+ F
Sbjct: 278 LKETAGLNSAAALVDYATVAPGKSLSVSVPLYAGPE-EYNIISK-LADGMEYAKDFGIFY 335
Query: 115 LPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVFQPF 154
+ F + + W+L K +G+++ W + + + ++V AVF P
Sbjct: 336 I--FASPLFWLLVKLHGLVSNWGWAIVLLTLTVKAVFYPL 373
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,033,205
Number of Sequences: 539616
Number of extensions: 4324072
Number of successful extensions: 9720
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 9702
Number of HSP's gapped (non-prelim): 35
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)