Query 024647
Match_columns 265
No_of_seqs 209 out of 2627
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 11:58:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024647.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024647hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 100.0 5.1E-47 1.8E-51 318.0 22.2 244 3-262 9-252 (257)
2 3g5t_A Trans-aconitate 3-methy 100.0 8.7E-34 3E-38 242.9 19.8 246 8-261 10-298 (299)
3 2yqz_A Hypothetical protein TT 99.9 1.5E-27 5.1E-32 199.9 13.6 242 1-262 1-263 (263)
4 3ccf_A Cyclopropane-fatty-acyl 99.9 4.3E-24 1.5E-28 180.8 12.0 232 9-263 32-279 (279)
5 2p35_A Trans-aconitate 2-methy 99.9 1.2E-22 4E-27 169.7 14.7 232 9-262 8-259 (259)
6 1vl5_A Unknown conserved prote 99.9 7.5E-23 2.6E-27 171.3 10.8 228 11-264 13-254 (260)
7 1xxl_A YCGJ protein; structura 99.9 1.2E-21 4.2E-26 162.0 13.9 210 31-263 19-238 (239)
8 3ege_A Putative methyltransfer 99.8 2.8E-20 9.5E-25 155.9 10.7 126 4-139 4-132 (261)
9 3l8d_A Methyltransferase; stru 99.8 1.4E-19 4.7E-24 149.5 12.1 130 3-140 18-156 (242)
10 4gek_A TRNA (CMO5U34)-methyltr 99.8 5.3E-19 1.8E-23 148.1 13.7 123 7-140 37-181 (261)
11 3e23_A Uncharacterized protein 99.8 3.5E-19 1.2E-23 144.2 10.8 126 3-139 15-143 (211)
12 3h2b_A SAM-dependent methyltra 99.8 4.3E-19 1.5E-23 142.8 11.0 130 2-141 6-145 (203)
13 2o57_A Putative sarcosine dime 99.8 4.7E-18 1.6E-22 144.8 17.2 100 32-139 81-189 (297)
14 3bus_A REBM, methyltransferase 99.8 1.4E-18 4.8E-23 146.1 13.8 110 22-139 48-168 (273)
15 4htf_A S-adenosylmethionine-de 99.8 6.5E-19 2.2E-23 149.3 11.6 129 3-139 28-175 (285)
16 3hnr_A Probable methyltransfer 99.8 1.9E-18 6.5E-23 140.6 12.2 126 3-139 7-147 (220)
17 3kkz_A Uncharacterized protein 99.8 2.1E-18 7E-23 144.8 11.8 124 6-138 14-151 (267)
18 2gs9_A Hypothetical protein TT 99.8 1E-18 3.4E-23 141.5 9.3 127 4-141 2-136 (211)
19 1pjz_A Thiopurine S-methyltran 99.8 6.9E-19 2.3E-23 142.1 8.0 108 20-135 8-138 (203)
20 2p7i_A Hypothetical protein; p 99.8 1.4E-18 4.6E-23 143.7 9.9 129 3-142 11-146 (250)
21 3pfg_A N-methyltransferase; N, 99.8 1.1E-18 3.8E-23 146.1 9.0 127 4-139 13-153 (263)
22 3ou2_A SAM-dependent methyltra 99.8 7E-18 2.4E-22 136.8 13.5 128 3-140 13-149 (218)
23 3dtn_A Putative methyltransfer 99.8 4.4E-18 1.5E-22 139.9 12.4 131 2-142 7-153 (234)
24 3dlc_A Putative S-adenosyl-L-m 99.8 2.7E-18 9.1E-23 139.2 10.5 116 15-139 25-150 (219)
25 2avn_A Ubiquinone/menaquinone 99.8 5.4E-18 1.8E-22 141.8 12.4 129 3-139 19-154 (260)
26 3f4k_A Putative methyltransfer 99.8 6.7E-18 2.3E-22 140.6 12.1 122 8-138 16-151 (257)
27 1nkv_A Hypothetical protein YJ 99.8 2.7E-18 9.2E-23 143.0 9.6 124 5-138 7-141 (256)
28 3e8s_A Putative SAM dependent 99.7 1.2E-17 3.9E-22 136.2 12.6 131 3-140 15-155 (227)
29 3dli_A Methyltransferase; PSI- 99.7 6.5E-18 2.2E-22 139.6 11.0 117 15-142 21-145 (240)
30 3g5l_A Putative S-adenosylmeth 99.7 7.1E-18 2.4E-22 140.3 10.7 105 27-139 36-147 (253)
31 3dh0_A SAM dependent methyltra 99.7 1.8E-18 6.1E-23 140.7 6.7 100 32-139 36-145 (219)
32 2gb4_A Thiopurine S-methyltran 99.7 7.1E-18 2.4E-22 140.6 10.3 110 20-137 53-191 (252)
33 3mgg_A Methyltransferase; NYSG 99.7 1E-17 3.6E-22 141.1 10.8 100 32-139 36-144 (276)
34 3bkw_A MLL3908 protein, S-aden 99.7 1.3E-17 4.5E-22 137.5 11.2 99 33-139 43-146 (243)
35 1y8c_A S-adenosylmethionine-de 99.7 1.1E-17 3.7E-22 138.2 10.2 127 4-139 2-144 (246)
36 3d2l_A SAM-dependent methyltra 99.7 1.6E-17 5.6E-22 137.0 11.3 126 4-139 3-139 (243)
37 2aot_A HMT, histamine N-methyl 99.7 1E-17 3.6E-22 142.5 10.3 101 33-139 52-174 (292)
38 3g2m_A PCZA361.24; SAM-depende 99.7 1.2E-17 4.2E-22 142.5 10.2 126 4-139 50-192 (299)
39 1vlm_A SAM-dependent methyltra 99.7 2.1E-17 7.3E-22 134.6 11.1 125 1-140 13-142 (219)
40 1ve3_A Hypothetical protein PH 99.7 2.1E-17 7.1E-22 135.0 10.8 111 21-139 26-144 (227)
41 3ujc_A Phosphoethanolamine N-m 99.7 4.1E-17 1.4E-21 136.3 12.8 112 20-139 40-161 (266)
42 3ofk_A Nodulation protein S; N 99.7 2.3E-17 7.7E-22 134.0 10.7 99 32-139 50-156 (216)
43 1p91_A Ribosomal RNA large sub 99.7 5.1E-17 1.7E-21 136.4 12.4 192 22-262 73-268 (269)
44 3jwh_A HEN1; methyltransferase 99.7 1.6E-17 5.4E-22 135.1 9.0 112 18-137 12-141 (217)
45 3sm3_A SAM-dependent methyltra 99.7 6.5E-17 2.2E-21 132.5 12.6 119 22-148 19-152 (235)
46 3vc1_A Geranyl diphosphate 2-C 99.7 4.5E-17 1.5E-21 139.8 11.9 100 32-139 116-223 (312)
47 4fsd_A Arsenic methyltransfera 99.7 5.8E-17 2E-21 143.1 12.3 100 32-139 82-205 (383)
48 3bxo_A N,N-dimethyltransferase 99.7 3.3E-17 1.1E-21 134.8 9.7 127 4-139 3-143 (239)
49 3thr_A Glycine N-methyltransfe 99.7 5.6E-17 1.9E-21 137.8 11.3 112 20-139 42-177 (293)
50 3i9f_A Putative type 11 methyl 99.7 4.2E-17 1.5E-21 127.4 9.8 105 22-139 8-114 (170)
51 1xtp_A LMAJ004091AAA; SGPP, st 99.7 6.9E-17 2.3E-21 134.2 10.9 99 32-138 92-198 (254)
52 2ex4_A Adrenal gland protein A 99.7 6.3E-17 2.1E-21 133.7 10.2 99 33-139 79-187 (241)
53 3gu3_A Methyltransferase; alph 99.7 1.1E-16 3.9E-21 135.5 11.9 112 19-139 5-128 (284)
54 1ri5_A MRNA capping enzyme; me 99.7 3.3E-17 1.1E-21 139.2 8.6 101 31-139 62-176 (298)
55 3mti_A RRNA methylase; SAM-dep 99.7 1.3E-16 4.3E-21 126.5 11.2 106 26-139 15-137 (185)
56 2pxx_A Uncharacterized protein 99.7 6.4E-17 2.2E-21 130.8 9.5 114 20-141 29-163 (215)
57 3lcc_A Putative methyl chlorid 99.7 2.1E-16 7.1E-21 130.0 11.9 111 20-139 53-173 (235)
58 3jwg_A HEN1, methyltransferase 99.7 9.3E-17 3.2E-21 130.7 9.5 108 21-136 15-140 (219)
59 3hem_A Cyclopropane-fatty-acyl 99.7 1.9E-16 6.5E-21 135.2 11.8 106 25-141 62-187 (302)
60 3iv6_A Putative Zn-dependent a 99.7 8.5E-17 2.9E-21 134.2 9.0 127 3-138 12-149 (261)
61 3cc8_A Putative methyltransfer 99.7 1.4E-16 4.7E-21 130.0 9.7 123 10-141 8-134 (230)
62 2xvm_A Tellurite resistance pr 99.7 5.3E-16 1.8E-20 123.9 12.9 108 21-139 22-138 (199)
63 3dxy_A TRNA (guanine-N(7)-)-me 99.7 1.8E-16 6.3E-21 129.2 9.7 108 24-139 25-152 (218)
64 1zx0_A Guanidinoacetate N-meth 99.7 4.1E-17 1.4E-21 134.5 5.7 111 20-138 46-171 (236)
65 3m33_A Uncharacterized protein 99.7 4E-16 1.4E-20 127.8 11.6 102 20-134 34-139 (226)
66 3g07_A 7SK snRNA methylphospha 99.7 4.1E-17 1.4E-21 138.9 5.8 102 33-137 46-220 (292)
67 3ggd_A SAM-dependent methyltra 99.7 2.4E-16 8.3E-21 130.4 10.1 110 23-140 46-166 (245)
68 2p8j_A S-adenosylmethionine-de 99.7 2.6E-16 8.9E-21 126.8 10.0 109 23-140 14-131 (209)
69 3p9n_A Possible methyltransfer 99.7 6.7E-16 2.3E-20 122.8 11.9 116 15-139 22-155 (189)
70 3cgg_A SAM-dependent methyltra 99.7 2.9E-15 9.8E-20 118.9 15.1 107 26-140 39-150 (195)
71 2kw5_A SLR1183 protein; struct 99.7 1.9E-16 6.4E-21 127.2 8.1 110 22-141 19-135 (202)
72 1kpg_A CFA synthase;, cyclopro 99.6 1.1E-15 3.9E-20 129.3 12.8 106 23-139 52-170 (287)
73 2zfu_A Nucleomethylin, cerebra 99.6 4.8E-16 1.6E-20 126.0 10.0 111 22-153 57-168 (215)
74 2vdw_A Vaccinia virus capping 99.6 4.4E-16 1.5E-20 133.1 9.9 103 33-139 48-171 (302)
75 3orh_A Guanidinoacetate N-meth 99.6 2.9E-16 9.8E-21 129.6 8.3 109 21-137 47-170 (236)
76 4e2x_A TCAB9; kijanose, tetron 99.6 3.9E-16 1.3E-20 139.2 9.6 113 23-139 95-210 (416)
77 2fk8_A Methoxy mycolic acid sy 99.6 1.5E-15 5E-20 130.6 12.7 108 23-141 78-198 (318)
78 1wzn_A SAM-dependent methyltra 99.6 7.8E-16 2.7E-20 127.7 10.5 129 1-138 1-146 (252)
79 3m70_A Tellurite resistance pr 99.6 1.2E-15 3.9E-20 129.3 11.7 108 20-138 109-224 (286)
80 3bkx_A SAM-dependent methyltra 99.6 1E-15 3.4E-20 128.7 10.2 104 32-140 42-162 (275)
81 2g72_A Phenylethanolamine N-me 99.6 2.9E-16 9.9E-21 133.3 6.8 105 32-137 70-215 (289)
82 2fca_A TRNA (guanine-N(7)-)-me 99.6 1.5E-15 5.1E-20 123.3 10.8 100 31-138 36-154 (213)
83 3dmg_A Probable ribosomal RNA 99.6 1.7E-15 5.8E-20 133.3 11.7 124 21-152 217-355 (381)
84 3e05_A Precorrin-6Y C5,15-meth 99.6 4.1E-15 1.4E-19 119.7 12.9 111 19-139 24-144 (204)
85 3htx_A HEN1; HEN1, small RNA m 99.6 1.2E-15 4.3E-20 142.7 11.0 115 16-139 702-836 (950)
86 3bgv_A MRNA CAP guanine-N7 met 99.6 7.8E-16 2.7E-20 132.1 9.0 111 22-140 23-158 (313)
87 3njr_A Precorrin-6Y methylase; 99.6 5.3E-15 1.8E-19 119.3 13.1 113 15-139 35-156 (204)
88 4df3_A Fibrillarin-like rRNA/T 99.6 2.9E-15 1E-19 122.5 10.9 120 11-137 51-182 (233)
89 3q87_B N6 adenine specific DNA 99.6 3.8E-15 1.3E-19 116.7 10.9 117 21-152 11-137 (170)
90 1ws6_A Methyltransferase; stru 99.6 3.8E-15 1.3E-19 116.0 10.6 118 15-142 20-152 (171)
91 2ift_A Putative methylase HI07 99.6 8.6E-16 3E-20 123.6 7.0 99 33-139 53-165 (201)
92 3ocj_A Putative exported prote 99.6 2E-15 6.7E-20 129.2 9.6 107 25-140 110-230 (305)
93 2fpo_A Methylase YHHF; structu 99.6 3.3E-15 1.1E-19 120.3 10.1 116 15-139 34-162 (202)
94 1dus_A MJ0882; hypothetical pr 99.6 5.7E-15 1.9E-19 117.1 11.3 110 22-140 39-160 (194)
95 1nt2_A Fibrillarin-like PRE-rR 99.6 9.8E-16 3.4E-20 124.2 6.9 96 32-137 56-161 (210)
96 2qe6_A Uncharacterized protein 99.6 8.6E-15 2.9E-19 123.4 12.5 130 8-140 43-199 (274)
97 2a14_A Indolethylamine N-methy 99.6 4E-16 1.4E-20 130.8 4.3 99 32-138 54-198 (263)
98 1xdz_A Methyltransferase GIDB; 99.6 6E-15 2.1E-19 121.8 11.1 95 32-137 69-174 (240)
99 3sso_A Methyltransferase; macr 99.6 1E-15 3.5E-20 133.6 6.7 124 3-138 182-325 (419)
100 2fhp_A Methylase, putative; al 99.6 2.4E-15 8.2E-20 119.0 8.1 119 14-141 23-158 (187)
101 2i62_A Nicotinamide N-methyltr 99.6 1.7E-15 5.8E-20 126.4 7.5 99 32-138 55-199 (265)
102 3lbf_A Protein-L-isoaspartate 99.6 8.8E-15 3E-19 118.1 11.5 107 20-139 62-176 (210)
103 2esr_A Methyltransferase; stru 99.6 1.3E-15 4.6E-20 119.6 6.3 118 15-141 11-142 (177)
104 1yzh_A TRNA (guanine-N(7)-)-me 99.6 1.3E-14 4.6E-19 117.6 11.8 99 32-138 40-157 (214)
105 3hm2_A Precorrin-6Y C5,15-meth 99.6 1.1E-14 3.9E-19 114.1 10.9 107 22-139 12-129 (178)
106 3eey_A Putative rRNA methylase 99.6 4.9E-15 1.7E-19 118.4 8.9 102 30-139 19-141 (197)
107 3fzg_A 16S rRNA methylase; met 99.6 2.8E-15 9.5E-20 117.8 7.1 108 21-137 37-152 (200)
108 3fpf_A Mtnas, putative unchara 99.6 1.9E-14 6.7E-19 121.3 12.4 96 31-138 120-223 (298)
109 3ckk_A TRNA (guanine-N(7)-)-me 99.6 1.1E-14 3.7E-19 120.0 9.9 100 32-139 45-170 (235)
110 3grz_A L11 mtase, ribosomal pr 99.6 8.4E-15 2.9E-19 117.9 8.7 107 21-139 48-161 (205)
111 3evz_A Methyltransferase; NYSG 99.6 1.1E-14 3.9E-19 119.1 9.4 105 28-139 50-181 (230)
112 1af7_A Chemotaxis receptor met 99.5 1.5E-14 5.1E-19 121.6 9.9 95 33-135 105-250 (274)
113 3uwp_A Histone-lysine N-methyl 99.5 4.9E-15 1.7E-19 129.6 7.1 99 32-138 172-289 (438)
114 1vbf_A 231AA long hypothetical 99.5 2.1E-14 7.1E-19 117.6 10.5 107 20-139 55-167 (231)
115 2plw_A Ribosomal RNA methyltra 99.5 1.3E-14 4.3E-19 116.3 8.8 108 21-141 8-158 (201)
116 3hp7_A Hemolysin, putative; st 99.5 1.6E-14 5.6E-19 121.8 9.6 110 20-136 70-184 (291)
117 3gdh_A Trimethylguanosine synt 99.5 4.1E-16 1.4E-20 128.7 -0.4 94 33-135 78-179 (241)
118 3mq2_A 16S rRNA methyltransfer 99.5 1.6E-14 5.4E-19 117.4 8.6 108 19-137 15-140 (218)
119 1ej0_A FTSJ; methyltransferase 99.5 1E-14 3.5E-19 113.8 7.0 99 31-142 20-141 (180)
120 3id6_C Fibrillarin-like rRNA/T 99.5 5.4E-14 1.8E-18 115.3 11.5 119 12-138 51-182 (232)
121 1l3i_A Precorrin-6Y methyltran 99.5 4.8E-14 1.6E-18 111.5 10.8 109 20-139 18-136 (192)
122 1fbn_A MJ fibrillarin homologu 99.5 3.2E-14 1.1E-18 116.7 9.8 107 15-136 52-177 (230)
123 2fyt_A Protein arginine N-meth 99.5 2.9E-14 9.9E-19 123.8 9.9 94 32-134 63-168 (340)
124 4dzr_A Protein-(glutamine-N5) 99.5 6.8E-15 2.3E-19 118.7 5.2 127 21-152 15-178 (215)
125 2yxe_A Protein-L-isoaspartate 99.5 5.8E-14 2E-18 113.7 10.6 106 21-139 63-179 (215)
126 2pwy_A TRNA (adenine-N(1)-)-me 99.5 1E-13 3.5E-18 115.2 12.3 112 15-139 77-200 (258)
127 3p2e_A 16S rRNA methylase; met 99.5 1.4E-14 4.9E-19 118.6 6.9 98 31-136 22-138 (225)
128 3adn_A Spermidine synthase; am 99.5 7.2E-14 2.5E-18 118.7 11.4 112 19-138 69-199 (294)
129 1dl5_A Protein-L-isoaspartate 99.5 4.9E-14 1.7E-18 121.2 10.5 105 22-139 62-177 (317)
130 2yxd_A Probable cobalt-precorr 99.5 1.1E-13 3.7E-18 108.7 10.8 108 18-139 18-133 (183)
131 3mb5_A SAM-dependent methyltra 99.5 1.4E-13 4.9E-18 114.4 12.0 111 15-139 74-196 (255)
132 2nxc_A L11 mtase, ribosomal pr 99.5 7.4E-14 2.5E-18 116.4 10.1 107 22-139 109-220 (254)
133 3reo_A (ISO)eugenol O-methyltr 99.5 6.9E-14 2.4E-18 122.7 10.3 96 32-139 202-302 (368)
134 1fp1_D Isoliquiritigenin 2'-O- 99.5 3.8E-14 1.3E-18 124.5 8.7 96 32-139 208-308 (372)
135 3q7e_A Protein arginine N-meth 99.5 6.7E-14 2.3E-18 121.9 9.9 95 32-135 65-171 (349)
136 2wa2_A Non-structural protein 99.5 2.4E-14 8.3E-19 120.6 6.7 95 32-139 81-195 (276)
137 3lpm_A Putative methyltransfer 99.5 1E-13 3.5E-18 115.7 10.4 98 33-138 49-177 (259)
138 3u81_A Catechol O-methyltransf 99.5 9.4E-14 3.2E-18 113.2 9.9 100 32-140 57-173 (221)
139 4dcm_A Ribosomal RNA large sub 99.5 1.1E-13 3.8E-18 121.6 10.8 119 25-152 212-349 (375)
140 2frn_A Hypothetical protein PH 99.5 1.4E-13 4.7E-18 116.3 10.9 104 24-139 116-227 (278)
141 2ipx_A RRNA 2'-O-methyltransfe 99.5 1.2E-13 4.2E-18 113.3 10.3 100 32-138 76-183 (233)
142 2oxt_A Nucleoside-2'-O-methylt 99.5 3E-14 1E-18 119.3 6.7 95 32-139 73-187 (265)
143 3r0q_C Probable protein argini 99.5 1.4E-13 4.9E-18 121.0 11.4 103 23-135 51-167 (376)
144 3bwc_A Spermidine synthase; SA 99.5 1.4E-13 4.7E-18 117.7 10.8 101 31-139 93-212 (304)
145 1i9g_A Hypothetical protein RV 99.5 2.3E-13 7.7E-18 114.7 12.0 113 16-140 81-206 (280)
146 3gwz_A MMCR; methyltransferase 99.5 1.4E-13 4.8E-18 120.8 11.0 105 24-139 191-309 (369)
147 2pbf_A Protein-L-isoaspartate 99.5 6.6E-14 2.3E-18 114.4 8.3 103 23-138 70-194 (227)
148 1fp2_A Isoflavone O-methyltran 99.5 8.8E-14 3E-18 121.3 9.3 96 32-139 187-290 (352)
149 3g89_A Ribosomal RNA small sub 99.5 1.2E-13 4E-18 114.8 9.6 95 33-138 80-185 (249)
150 3dou_A Ribosomal RNA large sub 99.5 5.6E-14 1.9E-18 112.1 7.3 121 21-155 11-156 (191)
151 3i53_A O-methyltransferase; CO 99.5 1E-13 3.5E-18 119.8 9.3 96 33-139 169-276 (332)
152 2r3s_A Uncharacterized protein 99.5 2.1E-13 7E-18 117.9 11.1 98 32-139 164-273 (335)
153 2gpy_A O-methyltransferase; st 99.5 1.4E-13 4.9E-18 112.9 9.5 114 15-138 34-161 (233)
154 3p9c_A Caffeic acid O-methyltr 99.5 2.2E-13 7.5E-18 119.3 11.1 96 32-139 200-300 (364)
155 2b3t_A Protein methyltransfera 99.5 2.1E-13 7.3E-18 114.8 10.6 110 20-138 95-239 (276)
156 1g8a_A Fibrillarin-like PRE-rR 99.5 2.6E-13 9E-18 110.8 10.7 117 12-136 48-177 (227)
157 3gjy_A Spermidine synthase; AP 99.5 2.3E-13 7.7E-18 116.2 10.6 114 18-139 69-202 (317)
158 1i1n_A Protein-L-isoaspartate 99.5 2.6E-13 8.9E-18 110.7 10.6 103 24-139 68-184 (226)
159 3ntv_A MW1564 protein; rossman 99.5 2.8E-13 9.5E-18 111.3 10.8 113 15-137 51-176 (232)
160 3dp7_A SAM-dependent methyltra 99.5 2E-13 6.7E-18 119.6 10.4 98 32-139 178-289 (363)
161 1r18_A Protein-L-isoaspartate( 99.5 6.8E-14 2.3E-18 114.4 6.9 102 24-139 75-196 (227)
162 1iy9_A Spermidine synthase; ro 99.5 3.1E-13 1.1E-17 113.9 11.1 101 31-139 73-191 (275)
163 2pjd_A Ribosomal RNA small sub 99.5 1.2E-13 4.2E-18 120.0 8.8 119 23-151 184-317 (343)
164 1o9g_A RRNA methyltransferase; 99.5 2.7E-13 9.2E-18 112.5 10.5 114 17-138 29-215 (250)
165 2ip2_A Probable phenazine-spec 99.5 2.8E-13 9.7E-18 117.1 10.9 116 11-139 145-274 (334)
166 1yb2_A Hypothetical protein TA 99.5 1.8E-13 6.2E-18 115.2 9.3 95 32-139 109-213 (275)
167 2nyu_A Putative ribosomal RNA 99.5 1.8E-13 6.2E-18 109.0 8.8 113 22-142 9-150 (196)
168 1inl_A Spermidine synthase; be 99.5 3.7E-13 1.3E-17 114.6 11.2 101 31-139 88-207 (296)
169 2bm8_A Cephalosporin hydroxyla 99.5 9.2E-14 3.1E-18 114.5 7.1 96 33-138 81-188 (236)
170 4azs_A Methyltransferase WBDD; 99.4 1.1E-13 3.7E-18 128.0 8.2 100 31-138 64-174 (569)
171 1uir_A Polyamine aminopropyltr 99.4 2.7E-13 9.2E-18 116.4 9.9 100 31-138 75-196 (314)
172 3dr5_A Putative O-methyltransf 99.4 5.1E-13 1.8E-17 108.9 11.0 92 35-136 58-162 (221)
173 3tfw_A Putative O-methyltransf 99.4 4.6E-13 1.6E-17 111.1 10.9 97 32-138 62-171 (248)
174 2vdv_E TRNA (guanine-N(7)-)-me 99.4 3.7E-13 1.3E-17 111.5 10.3 98 33-138 49-174 (246)
175 1jsx_A Glucose-inhibited divis 99.4 3.1E-13 1.1E-17 108.6 9.4 94 33-138 65-166 (207)
176 1jg1_A PIMT;, protein-L-isoasp 99.4 4.3E-13 1.5E-17 110.2 10.3 106 20-139 76-191 (235)
177 1x19_A CRTF-related protein; m 99.4 4.7E-13 1.6E-17 117.0 10.9 97 32-139 189-297 (359)
178 3tma_A Methyltransferase; thum 99.4 9.7E-13 3.3E-17 114.8 12.7 113 19-139 187-319 (354)
179 3c3p_A Methyltransferase; NP_9 99.4 4.8E-13 1.7E-17 108.0 10.0 112 15-137 36-160 (210)
180 1xj5_A Spermidine synthase 1; 99.4 6.1E-13 2.1E-17 115.0 11.2 99 31-137 118-235 (334)
181 1qzz_A RDMB, aclacinomycin-10- 99.4 4.3E-13 1.5E-17 117.7 10.5 96 32-138 181-288 (374)
182 1g6q_1 HnRNP arginine N-methyl 99.4 3E-13 1E-17 116.8 9.1 94 32-134 37-142 (328)
183 3a27_A TYW2, uncharacterized p 99.4 7.9E-13 2.7E-17 111.2 11.3 100 28-139 114-221 (272)
184 2yvl_A TRMI protein, hypotheti 99.4 1.5E-12 5.1E-17 107.5 12.8 109 18-139 75-192 (248)
185 2pt6_A Spermidine synthase; tr 99.4 6.9E-13 2.4E-17 114.1 10.7 101 31-139 114-232 (321)
186 3opn_A Putative hemolysin; str 99.4 6.3E-13 2.1E-17 109.2 9.9 109 22-137 24-137 (232)
187 1o54_A SAM-dependent O-methylt 99.4 1E-12 3.5E-17 110.7 11.2 109 17-139 95-215 (277)
188 2ozv_A Hypothetical protein AT 99.4 5.5E-13 1.9E-17 111.4 9.2 100 32-139 35-172 (260)
189 2i7c_A Spermidine synthase; tr 99.4 8.3E-13 2.8E-17 111.7 9.9 101 31-139 76-194 (283)
190 3bzb_A Uncharacterized protein 99.4 9.5E-13 3.2E-17 111.2 10.2 112 20-135 64-203 (281)
191 2o07_A Spermidine synthase; st 99.4 9.8E-13 3.4E-17 112.3 10.2 98 32-137 94-209 (304)
192 2y1w_A Histone-arginine methyl 99.4 7.2E-13 2.5E-17 115.4 9.4 94 32-135 49-153 (348)
193 3tr6_A O-methyltransferase; ce 99.4 5.9E-13 2E-17 108.4 8.3 100 32-138 63-175 (225)
194 1u2z_A Histone-lysine N-methyl 99.4 5.6E-13 1.9E-17 118.5 8.7 110 21-137 228-359 (433)
195 2b25_A Hypothetical protein; s 99.4 8.4E-13 2.9E-17 114.3 9.6 110 18-139 89-221 (336)
196 1zg3_A Isoflavanone 4'-O-methy 99.4 5.6E-13 1.9E-17 116.4 8.5 95 33-139 193-295 (358)
197 2ld4_A Anamorsin; methyltransf 99.4 1.9E-13 6.4E-18 107.3 4.7 85 31-137 10-101 (176)
198 2cmg_A Spermidine synthase; tr 99.4 1.4E-12 4.7E-17 109.1 10.1 93 32-139 71-173 (262)
199 1mjf_A Spermidine synthase; sp 99.4 1.2E-12 4E-17 110.7 9.8 99 31-138 73-194 (281)
200 2igt_A SAM dependent methyltra 99.4 1.4E-12 4.7E-17 112.7 10.2 113 32-152 152-288 (332)
201 3duw_A OMT, O-methyltransferas 99.4 2.4E-12 8.3E-17 104.7 11.1 101 32-138 57-168 (223)
202 2b2c_A Spermidine synthase; be 99.4 1.5E-12 5E-17 111.7 10.1 99 31-137 106-222 (314)
203 3mcz_A O-methyltransferase; ad 99.4 7.1E-13 2.4E-17 115.4 8.2 97 34-139 180-289 (352)
204 3lst_A CALO1 methyltransferase 99.4 1.1E-12 3.8E-17 114.1 9.2 96 32-139 183-288 (348)
205 2p41_A Type II methyltransfera 99.4 4E-13 1.4E-17 114.7 6.1 107 22-139 70-193 (305)
206 1tw3_A COMT, carminomycin 4-O- 99.4 2E-12 6.8E-17 112.9 10.5 97 32-139 182-290 (360)
207 2avd_A Catechol-O-methyltransf 99.4 1.5E-12 5.2E-17 106.3 9.1 116 17-138 51-180 (229)
208 1sui_A Caffeoyl-COA O-methyltr 99.4 2.8E-12 9.5E-17 106.3 10.6 96 32-137 78-190 (247)
209 4hc4_A Protein arginine N-meth 99.4 1.1E-12 3.7E-17 114.8 8.5 92 33-134 83-186 (376)
210 3giw_A Protein of unknown func 99.4 2.2E-12 7.4E-17 107.6 9.8 99 34-140 79-203 (277)
211 3r3h_A O-methyltransferase, SA 99.4 3.7E-13 1.3E-17 111.3 5.1 97 32-138 59-171 (242)
212 1nv8_A HEMK protein; class I a 99.4 3.8E-12 1.3E-16 107.7 10.8 109 20-138 108-250 (284)
213 1ne2_A Hypothetical protein TA 99.3 1.8E-12 6.2E-17 103.7 8.1 85 32-126 50-139 (200)
214 1zq9_A Probable dimethyladenos 99.3 2.8E-12 9.7E-17 108.5 9.4 105 20-134 13-144 (285)
215 3cbg_A O-methyltransferase; cy 99.3 5.2E-12 1.8E-16 103.7 10.1 101 32-138 71-183 (232)
216 3c3y_A Pfomt, O-methyltransfer 99.3 7E-12 2.4E-16 103.2 10.7 99 32-137 69-181 (237)
217 2hnk_A SAM-dependent O-methylt 99.3 3E-12 1E-16 105.4 8.2 100 32-137 59-181 (239)
218 4dmg_A Putative uncharacterize 99.3 1.6E-12 5.4E-17 114.7 6.5 110 24-141 205-330 (393)
219 2b78_A Hypothetical protein SM 99.3 6.3E-12 2.2E-16 110.8 10.1 110 26-140 205-334 (385)
220 1ixk_A Methyltransferase; open 99.3 1.2E-11 4.3E-16 106.0 11.5 100 32-139 117-248 (315)
221 3b3j_A Histone-arginine methyl 99.3 3.2E-12 1.1E-16 115.6 7.9 94 32-135 157-261 (480)
222 2h00_A Methyltransferase 10 do 99.3 1.8E-12 6.3E-17 107.6 5.7 96 33-136 65-191 (254)
223 2qm3_A Predicted methyltransfe 99.3 1.1E-11 3.9E-16 108.8 10.7 97 33-138 172-279 (373)
224 3ajd_A Putative methyltransfer 99.3 9.3E-12 3.2E-16 104.7 9.3 100 32-139 82-213 (274)
225 3kr9_A SAM-dependent methyltra 99.3 1.8E-11 6.3E-16 99.5 9.6 118 23-153 5-132 (225)
226 3lec_A NADB-rossmann superfami 99.3 2.3E-11 7.7E-16 99.2 10.0 118 24-153 12-138 (230)
227 1wxx_A TT1595, hypothetical pr 99.2 6.9E-12 2.3E-16 110.5 6.9 100 33-140 209-328 (382)
228 2as0_A Hypothetical protein PH 99.2 1E-11 3.6E-16 109.8 7.9 109 24-140 208-338 (396)
229 1qam_A ERMC' methyltransferase 99.2 1.1E-11 3.9E-16 102.5 7.6 94 9-111 5-105 (244)
230 3gnl_A Uncharacterized protein 99.2 2.6E-11 8.8E-16 99.6 9.3 118 24-153 12-138 (244)
231 2h1r_A Dimethyladenosine trans 99.2 1.7E-11 5.7E-16 104.5 8.4 86 20-114 27-120 (299)
232 3c0k_A UPF0064 protein YCCW; P 99.2 3E-11 1E-15 106.9 9.6 105 26-139 214-341 (396)
233 2yx1_A Hypothetical protein MJ 99.2 3.7E-11 1.3E-15 104.0 9.7 101 26-141 188-295 (336)
234 3gru_A Dimethyladenosine trans 99.2 2.2E-11 7.5E-16 103.2 8.0 87 20-113 35-127 (295)
235 3lcv_B Sisomicin-gentamicin re 99.2 2.8E-11 9.7E-16 99.4 8.3 108 21-138 120-237 (281)
236 3frh_A 16S rRNA methylase; met 99.2 4.2E-11 1.4E-15 97.5 8.9 106 21-137 94-206 (253)
237 3k6r_A Putative transferase PH 99.2 1.1E-11 3.9E-16 104.0 5.4 101 26-138 118-226 (278)
238 1yub_A Ermam, rRNA methyltrans 99.2 2.6E-13 8.8E-18 112.4 -4.7 108 21-137 15-145 (245)
239 4a6d_A Hydroxyindole O-methylt 99.2 1.8E-10 6E-15 100.4 12.7 96 33-139 179-285 (353)
240 3v97_A Ribosomal RNA large sub 99.2 4.5E-11 1.6E-15 112.8 9.6 100 32-139 538-659 (703)
241 3tm4_A TRNA (guanine N2-)-meth 99.2 6.9E-11 2.4E-15 103.7 9.9 102 19-127 202-322 (373)
242 1wy7_A Hypothetical protein PH 99.2 1.4E-10 4.6E-15 93.1 10.0 84 33-126 49-141 (207)
243 2jjq_A Uncharacterized RNA met 99.2 1.9E-10 6.7E-15 102.4 11.9 102 22-137 280-387 (425)
244 2ih2_A Modification methylase 99.2 6.5E-11 2.2E-15 105.3 8.7 108 20-139 24-166 (421)
245 2yxl_A PH0851 protein, 450AA l 99.2 1E-10 3.5E-15 105.1 9.9 100 32-139 258-391 (450)
246 2xyq_A Putative 2'-O-methyl tr 99.2 1.6E-10 5.6E-15 97.5 10.4 104 32-154 62-187 (290)
247 2frx_A Hypothetical protein YE 99.1 1.5E-10 5.1E-15 104.6 10.0 99 33-139 117-248 (479)
248 1uwv_A 23S rRNA (uracil-5-)-me 99.1 2.6E-10 9E-15 102.0 11.0 106 21-137 272-389 (433)
249 2f8l_A Hypothetical protein LM 99.1 1.8E-10 6.1E-15 100.0 8.9 98 33-139 130-258 (344)
250 3bt7_A TRNA (uracil-5-)-methyl 99.1 3.8E-10 1.3E-14 98.8 10.5 111 21-143 200-332 (369)
251 2qfm_A Spermine synthase; sper 99.1 2.2E-10 7.5E-15 98.9 7.7 100 32-139 187-316 (364)
252 1sqg_A SUN protein, FMU protei 99.1 3E-10 1E-14 101.5 8.3 100 32-139 245-376 (429)
253 3tqs_A Ribosomal RNA small sub 99.1 2.6E-10 8.8E-15 94.8 7.2 82 20-109 14-105 (255)
254 3m4x_A NOL1/NOP2/SUN family pr 99.0 3.3E-10 1.1E-14 101.5 7.8 100 32-139 104-236 (456)
255 3fut_A Dimethyladenosine trans 99.0 4.8E-10 1.6E-14 93.9 8.2 85 20-112 32-122 (271)
256 3m6w_A RRNA methylase; rRNA me 99.0 3.9E-10 1.3E-14 101.1 8.0 99 32-139 100-231 (464)
257 2okc_A Type I restriction enzy 99.0 2.1E-09 7.1E-14 96.5 10.2 111 20-139 156-309 (445)
258 3o4f_A Spermidine synthase; am 99.0 6.1E-09 2.1E-13 87.6 12.1 114 19-139 69-200 (294)
259 3evf_A RNA-directed RNA polyme 98.9 9.7E-10 3.3E-14 90.9 6.0 111 21-139 61-186 (277)
260 3k0b_A Predicted N6-adenine-sp 98.9 8.9E-09 3.1E-13 90.7 12.0 113 18-139 184-352 (393)
261 3uzu_A Ribosomal RNA small sub 98.9 1.6E-09 5.3E-14 91.2 6.5 82 20-108 27-122 (279)
262 1m6e_X S-adenosyl-L-methionnin 98.9 5.1E-09 1.8E-13 90.7 9.7 104 32-140 50-212 (359)
263 3ldu_A Putative methylase; str 98.9 6.4E-09 2.2E-13 91.5 10.4 113 18-139 178-346 (385)
264 1qyr_A KSGA, high level kasuga 98.9 1.7E-09 5.7E-14 89.7 6.3 80 21-109 7-99 (252)
265 3ua3_A Protein arginine N-meth 98.9 2.5E-09 8.6E-14 98.9 7.2 120 3-134 380-531 (745)
266 3ftd_A Dimethyladenosine trans 98.9 1.1E-08 3.9E-13 84.5 10.5 84 20-110 16-105 (249)
267 2r6z_A UPF0341 protein in RSP 98.9 1.6E-09 5.3E-14 90.2 5.0 75 32-113 82-174 (258)
268 3ldg_A Putative uncharacterize 98.9 2E-08 6.7E-13 88.2 11.8 112 19-139 178-345 (384)
269 2efj_A 3,7-dimethylxanthine me 98.8 9.4E-09 3.2E-13 89.8 9.3 104 34-142 53-230 (384)
270 1m6y_A S-adenosyl-methyltransf 98.8 7.7E-09 2.6E-13 87.8 6.4 86 15-109 10-107 (301)
271 4gqb_A Protein arginine N-meth 98.7 1E-08 3.6E-13 94.7 6.5 118 3-134 325-464 (637)
272 3cvo_A Methyltransferase-like 98.7 6.7E-08 2.3E-12 77.0 10.0 113 18-137 15-154 (202)
273 3b5i_A S-adenosyl-L-methionine 98.7 2.2E-08 7.4E-13 87.4 7.5 103 34-141 53-229 (374)
274 4auk_A Ribosomal RNA large sub 98.7 3.4E-08 1.2E-12 85.3 8.5 88 31-130 209-296 (375)
275 2oyr_A UPF0341 protein YHIQ; a 98.7 1.1E-08 3.8E-13 84.9 5.2 89 35-131 90-194 (258)
276 3axs_A Probable N(2),N(2)-dime 98.7 3.1E-08 1.1E-12 87.0 8.2 94 33-137 52-158 (392)
277 2dul_A N(2),N(2)-dimethylguano 98.7 2.9E-08 1E-12 87.0 8.0 94 33-137 47-164 (378)
278 3gcz_A Polyprotein; flavivirus 98.7 8.1E-09 2.8E-13 85.5 4.2 112 20-139 76-203 (282)
279 2ar0_A M.ecoki, type I restric 98.7 3.5E-08 1.2E-12 90.5 8.7 112 20-139 154-314 (541)
280 3ll7_A Putative methyltransfer 98.6 2.5E-08 8.7E-13 87.8 5.0 70 32-108 92-171 (410)
281 2b9e_A NOL1/NOP2/SUN domain fa 98.6 1.9E-07 6.4E-12 79.6 9.6 69 32-107 101-181 (309)
282 3s1s_A Restriction endonucleas 98.5 4.9E-07 1.7E-11 85.1 11.2 112 20-139 300-467 (878)
283 2k4m_A TR8_protein, UPF0146 pr 98.5 1.1E-07 3.8E-12 70.9 5.2 98 21-139 23-123 (153)
284 3v97_A Ribosomal RNA large sub 98.5 6.8E-07 2.3E-11 84.4 10.6 113 19-139 174-349 (703)
285 3khk_A Type I restriction-modi 98.5 1.3E-07 4.6E-12 86.5 5.4 116 20-139 230-397 (544)
286 3eld_A Methyltransferase; flav 98.4 3.7E-07 1.2E-11 76.1 6.3 111 21-139 68-193 (300)
287 2px2_A Genome polyprotein [con 98.4 1.5E-07 5.2E-12 76.7 3.6 109 22-139 61-185 (269)
288 1wg8_A Predicted S-adenosylmet 98.4 2.4E-06 8.2E-11 71.0 10.2 91 15-109 6-98 (285)
289 3lkd_A Type I restriction-modi 98.3 1.4E-06 4.8E-11 79.7 9.1 113 20-139 202-360 (542)
290 2qy6_A UPF0209 protein YFCK; s 98.3 9.7E-07 3.3E-11 73.2 6.8 105 33-138 60-214 (257)
291 3c6k_A Spermine synthase; sper 98.3 1.7E-06 5.9E-11 75.0 7.6 98 32-137 204-331 (381)
292 2zig_A TTHA0409, putative modi 98.2 2.1E-06 7.1E-11 72.7 6.3 59 15-73 216-275 (297)
293 3lkz_A Non-structural protein 98.2 4.1E-06 1.4E-10 69.5 7.5 109 22-139 82-206 (321)
294 3p8z_A Mtase, non-structural p 98.0 1.2E-05 4.1E-10 64.6 7.1 108 22-139 66-188 (267)
295 2wk1_A NOVP; transferase, O-me 98.0 2.4E-05 8.2E-10 65.5 8.5 112 32-155 105-259 (282)
296 3r24_A NSP16, 2'-O-methyl tran 97.7 0.00025 8.5E-09 58.9 10.2 118 22-155 95-234 (344)
297 4fzv_A Putative methyltransfer 97.7 0.0002 7E-09 62.0 10.2 100 32-139 147-286 (359)
298 3tka_A Ribosomal RNA small sub 97.7 0.00024 8.1E-09 60.5 10.2 94 14-110 40-138 (347)
299 1g60_A Adenine-specific methyl 97.6 8.7E-05 3E-09 61.5 6.3 56 18-73 196-252 (260)
300 2oo3_A Protein involved in cat 97.4 0.00054 1.9E-08 56.9 8.5 113 21-139 81-200 (283)
301 3ufb_A Type I restriction-modi 97.3 0.0014 4.8E-08 59.8 10.7 117 20-139 202-364 (530)
302 1i4w_A Mitochondrial replicati 97.3 0.00053 1.8E-08 59.2 7.2 65 20-84 37-114 (353)
303 2dph_A Formaldehyde dismutase; 97.2 0.0023 7.8E-08 56.1 10.6 105 31-138 183-300 (398)
304 2vz8_A Fatty acid synthase; tr 97.1 0.00012 4.1E-09 77.9 1.6 109 23-137 1229-1348(2512)
305 1f8f_A Benzyl alcohol dehydrog 97.1 0.0024 8.1E-08 55.4 9.6 99 32-138 189-290 (371)
306 1pl8_A Human sorbitol dehydrog 97.1 0.004 1.4E-07 53.7 10.9 100 31-138 169-274 (356)
307 3fpc_A NADP-dependent alcohol 97.1 0.0027 9.1E-08 54.7 9.4 101 31-138 164-267 (352)
308 1kol_A Formaldehyde dehydrogen 97.0 0.0033 1.1E-07 55.1 9.8 105 31-138 183-301 (398)
309 3s2e_A Zinc-containing alcohol 96.9 0.0045 1.5E-07 52.9 9.6 98 32-138 165-264 (340)
310 1boo_A Protein (N-4 cytosine-s 96.8 0.00087 3E-08 57.2 4.3 56 18-73 236-292 (323)
311 1e3j_A NADP(H)-dependent ketos 96.8 0.013 4.4E-07 50.3 11.7 101 31-138 166-272 (352)
312 3uko_A Alcohol dehydrogenase c 96.8 0.0087 3E-07 52.0 10.5 99 32-138 192-296 (378)
313 1pqw_A Polyketide synthase; ro 96.8 0.0076 2.6E-07 47.1 9.3 99 32-138 37-138 (198)
314 4dvj_A Putative zinc-dependent 96.8 0.01 3.5E-07 51.3 10.7 95 33-136 171-269 (363)
315 4ej6_A Putative zinc-binding d 96.8 0.0085 2.9E-07 51.9 10.2 102 31-138 180-285 (370)
316 1vj0_A Alcohol dehydrogenase, 96.7 0.0065 2.2E-07 52.9 9.1 101 31-138 193-299 (380)
317 2d8a_A PH0655, probable L-thre 96.7 0.011 3.7E-07 50.7 10.4 99 33-138 167-268 (348)
318 3jv7_A ADH-A; dehydrogenase, n 96.7 0.0087 3E-07 51.2 9.7 100 31-138 169-271 (345)
319 3ip1_A Alcohol dehydrogenase, 96.7 0.016 5.4E-07 50.8 11.4 103 31-139 211-320 (404)
320 3uog_A Alcohol dehydrogenase; 96.6 0.0069 2.4E-07 52.3 8.7 99 32-138 188-288 (363)
321 2dq4_A L-threonine 3-dehydroge 96.6 0.0078 2.7E-07 51.5 8.7 97 33-138 164-263 (343)
322 1rjw_A ADH-HT, alcohol dehydro 96.6 0.014 4.8E-07 49.8 10.0 99 31-138 162-262 (339)
323 1p0f_A NADP-dependent alcohol 96.5 0.016 5.5E-07 50.1 10.3 99 32-138 190-294 (373)
324 3g7u_A Cytosine-specific methy 96.5 0.013 4.4E-07 51.0 9.6 77 35-111 3-82 (376)
325 3m6i_A L-arabinitol 4-dehydrog 96.5 0.011 3.8E-07 50.9 9.1 102 31-139 177-285 (363)
326 3qwb_A Probable quinone oxidor 96.5 0.015 5E-07 49.6 9.6 99 32-138 147-248 (334)
327 3two_A Mannitol dehydrogenase; 96.5 0.005 1.7E-07 52.9 6.6 91 31-138 174-266 (348)
328 4a2c_A Galactitol-1-phosphate 96.4 0.048 1.7E-06 46.4 12.3 102 31-139 158-262 (346)
329 2jhf_A Alcohol dehydrogenase E 96.4 0.025 8.6E-07 48.9 10.6 99 32-138 190-294 (374)
330 1cdo_A Alcohol dehydrogenase; 96.3 0.018 6.2E-07 49.8 9.5 99 32-138 191-295 (374)
331 3jyn_A Quinone oxidoreductase; 96.3 0.013 4.4E-07 49.7 8.4 99 32-138 139-240 (325)
332 1uuf_A YAHK, zinc-type alcohol 96.3 0.0092 3.2E-07 51.7 7.5 95 31-138 192-289 (369)
333 4b7c_A Probable oxidoreductase 96.3 0.018 6.1E-07 49.0 9.2 99 31-138 147-249 (336)
334 2fzw_A Alcohol dehydrogenase c 96.3 0.02 6.8E-07 49.5 9.5 99 32-138 189-293 (373)
335 3gms_A Putative NADPH:quinone 96.3 0.012 4.1E-07 50.2 8.0 99 32-138 143-244 (340)
336 2h6e_A ADH-4, D-arabinose 1-de 96.3 0.014 4.8E-07 49.9 8.3 97 33-138 170-270 (344)
337 1e3i_A Alcohol dehydrogenase, 96.3 0.024 8.2E-07 49.1 9.8 99 32-138 194-298 (376)
338 4eez_A Alcohol dehydrogenase 1 96.2 0.029 9.9E-07 47.9 10.2 101 31-138 161-264 (348)
339 1v3u_A Leukotriene B4 12- hydr 96.2 0.022 7.6E-07 48.4 9.3 98 32-138 144-245 (333)
340 3fbg_A Putative arginate lyase 96.1 0.029 9.9E-07 48.0 9.6 96 33-137 150-248 (346)
341 2b5w_A Glucose dehydrogenase; 96.1 0.029 9.8E-07 48.2 9.5 93 35-138 174-274 (357)
342 1eg2_A Modification methylase 96.0 0.0089 3E-07 50.8 5.7 56 18-73 226-285 (319)
343 1rjd_A PPM1P, carboxy methyl t 95.9 0.089 3E-06 44.9 11.7 102 33-138 97-233 (334)
344 3tos_A CALS11; methyltransfera 95.9 0.064 2.2E-06 44.0 10.3 119 32-156 68-235 (257)
345 2hcy_A Alcohol dehydrogenase 1 95.9 0.021 7.3E-07 48.8 7.8 100 31-138 167-270 (347)
346 1jvb_A NAD(H)-dependent alcoho 95.9 0.022 7.5E-07 48.7 7.8 101 31-138 168-272 (347)
347 2eih_A Alcohol dehydrogenase; 95.9 0.031 1.1E-06 47.7 8.6 99 32-138 165-266 (343)
348 1yb5_A Quinone oxidoreductase; 95.9 0.04 1.4E-06 47.3 9.3 99 32-138 169-270 (351)
349 1g55_A DNA cytosine methyltran 95.8 0.0064 2.2E-07 52.3 4.1 87 34-127 2-106 (343)
350 4dup_A Quinone oxidoreductase; 95.8 0.028 9.7E-07 48.2 8.1 98 32-138 166-266 (353)
351 4eye_A Probable oxidoreductase 95.7 0.025 8.4E-07 48.4 7.1 98 32-138 158-258 (342)
352 2j3h_A NADP-dependent oxidored 95.6 0.062 2.1E-06 45.8 9.4 98 32-138 154-256 (345)
353 2c0c_A Zinc binding alcohol de 95.5 0.071 2.4E-06 45.9 9.6 99 31-138 161-262 (362)
354 1qor_A Quinone oxidoreductase; 95.5 0.044 1.5E-06 46.3 7.9 99 32-138 139-240 (327)
355 1piw_A Hypothetical zinc-type 95.4 0.01 3.4E-07 51.2 3.8 97 31-138 177-277 (360)
356 2cf5_A Atccad5, CAD, cinnamyl 95.3 0.024 8.1E-07 48.8 5.7 94 33-138 180-276 (357)
357 3goh_A Alcohol dehydrogenase, 95.2 0.015 5.3E-07 49.0 4.3 87 32-137 141-229 (315)
358 2j8z_A Quinone oxidoreductase; 95.2 0.066 2.3E-06 45.9 8.2 99 32-138 161-262 (354)
359 3gqv_A Enoyl reductase; medium 95.0 0.18 6.1E-06 43.5 10.6 97 32-137 163-263 (371)
360 3krt_A Crotonyl COA reductase; 94.9 0.094 3.2E-06 46.6 8.7 100 31-138 226-345 (456)
361 3gaz_A Alcohol dehydrogenase s 94.9 0.098 3.3E-06 44.6 8.5 96 32-138 149-247 (343)
362 1yqd_A Sinapyl alcohol dehydro 94.9 0.047 1.6E-06 47.1 6.5 94 33-138 187-283 (366)
363 1wly_A CAAR, 2-haloacrylate re 94.8 0.077 2.6E-06 45.0 7.5 99 32-138 144-245 (333)
364 2py6_A Methyltransferase FKBM; 94.8 0.037 1.3E-06 48.7 5.6 42 32-73 225-270 (409)
365 3nx4_A Putative oxidoreductase 94.8 0.071 2.4E-06 45.0 7.1 90 36-138 149-242 (324)
366 2c7p_A Modification methylase 94.7 0.087 3E-06 44.8 7.4 68 34-110 11-81 (327)
367 2zb4_A Prostaglandin reductase 94.6 0.17 5.7E-06 43.3 9.3 99 31-138 156-261 (357)
368 3vyw_A MNMC2; tRNA wobble urid 94.3 0.041 1.4E-06 46.3 4.4 41 97-138 183-227 (308)
369 3fwz_A Inner membrane protein 94.1 0.45 1.5E-05 34.7 9.5 95 34-137 7-105 (140)
370 2vn8_A Reticulon-4-interacting 94.1 0.12 4.3E-06 44.5 7.3 96 31-137 181-280 (375)
371 2cdc_A Glucose dehydrogenase g 94.1 0.094 3.2E-06 45.1 6.5 93 34-138 181-279 (366)
372 4a0s_A Octenoyl-COA reductase/ 94.0 0.2 6.8E-06 44.3 8.5 99 31-138 218-337 (447)
373 3pi7_A NADH oxidoreductase; gr 93.9 0.12 4.2E-06 44.1 6.9 96 35-138 166-264 (349)
374 4h0n_A DNMT2; SAH binding, tra 93.9 0.069 2.4E-06 45.6 5.1 89 35-127 4-107 (333)
375 1iz0_A Quinone oxidoreductase; 93.8 0.059 2E-06 45.0 4.6 93 31-138 123-219 (302)
376 3tqh_A Quinone oxidoreductase; 93.7 0.17 5.9E-06 42.6 7.4 92 31-137 150-245 (321)
377 2g1u_A Hypothetical protein TM 93.4 0.21 7.2E-06 37.1 6.6 99 32-137 17-118 (155)
378 1xa0_A Putative NADPH dependen 93.3 0.2 6.9E-06 42.2 7.2 97 32-138 147-247 (328)
379 1tt7_A YHFP; alcohol dehydroge 93.2 0.31 1.1E-05 41.1 8.2 94 32-138 148-248 (330)
380 3ubt_Y Modification methylase 93.0 0.18 6.3E-06 42.5 6.5 69 35-110 1-71 (331)
381 2qrv_A DNA (cytosine-5)-methyl 93.0 0.17 5.8E-06 42.4 6.0 74 32-108 14-91 (295)
382 1h2b_A Alcohol dehydrogenase; 92.9 0.38 1.3E-05 41.2 8.3 98 31-138 184-286 (359)
383 3qv2_A 5-cytosine DNA methyltr 92.9 0.063 2.1E-06 45.7 3.2 87 33-127 9-117 (327)
384 3iht_A S-adenosyl-L-methionine 92.8 0.13 4.4E-06 38.5 4.3 109 23-135 29-145 (174)
385 3c85_A Putative glutathione-re 92.8 1.1 3.7E-05 34.1 10.0 96 34-137 39-139 (183)
386 3ps9_A TRNA 5-methylaminomethy 92.6 0.35 1.2E-05 45.2 8.2 105 33-138 66-220 (676)
387 3llv_A Exopolyphosphatase-rela 92.5 0.52 1.8E-05 34.2 7.5 70 35-108 7-78 (141)
388 3me5_A Cytosine-specific methy 92.3 0.35 1.2E-05 43.3 7.5 50 35-84 89-143 (482)
389 3ggo_A Prephenate dehydrogenas 92.1 0.88 3E-05 38.2 9.4 87 35-134 34-125 (314)
390 1lss_A TRK system potassium up 92.0 1.3 4.3E-05 31.7 9.1 94 34-135 4-100 (140)
391 2uyo_A Hypothetical protein ML 91.4 1.1 3.7E-05 37.7 9.1 103 35-139 104-220 (310)
392 2zig_A TTHA0409, putative modi 91.1 0.2 6.9E-06 41.8 4.4 42 96-138 36-98 (297)
393 4a27_A Synaptic vesicle membra 90.9 0.48 1.6E-05 40.3 6.6 95 32-138 141-239 (349)
394 3iup_A Putative NADPH:quinone 90.7 0.31 1.1E-05 42.1 5.2 75 32-107 169-247 (379)
395 3pvc_A TRNA 5-methylaminomethy 90.6 0.54 1.8E-05 44.0 7.2 104 33-137 58-211 (689)
396 3l9w_A Glutathione-regulated p 90.5 1.8 6.2E-05 37.9 10.1 95 34-138 4-103 (413)
397 3p2y_A Alanine dehydrogenase/p 89.8 0.3 1E-05 42.3 4.3 98 33-135 183-300 (381)
398 2f1k_A Prephenate dehydrogenas 89.5 1.6 5.4E-05 35.6 8.5 84 36-134 2-88 (279)
399 1gu7_A Enoyl-[acyl-carrier-pro 89.1 0.88 3E-05 38.8 6.9 100 32-138 165-276 (364)
400 2g5c_A Prephenate dehydrogenas 89.0 2.2 7.6E-05 34.8 9.0 88 36-135 3-94 (281)
401 3abi_A Putative uncharacterize 88.1 0.68 2.3E-05 39.7 5.5 71 32-108 14-85 (365)
402 3dmg_A Probable ribosomal RNA 88.0 1.7 5.8E-05 37.6 7.9 113 15-139 26-141 (381)
403 4e12_A Diketoreductase; oxidor 87.9 1.2 4.1E-05 36.7 6.7 88 35-134 5-118 (283)
404 3ce6_A Adenosylhomocysteinase; 87.8 0.84 2.9E-05 41.0 6.0 90 31-139 271-363 (494)
405 3l4b_C TRKA K+ channel protien 87.6 2.7 9.3E-05 32.8 8.4 95 35-135 1-97 (218)
406 4e21_A 6-phosphogluconate dehy 87.5 1.3 4.3E-05 38.1 6.7 89 34-134 22-112 (358)
407 4dio_A NAD(P) transhydrogenase 87.3 0.45 1.5E-05 41.6 3.8 98 33-135 189-310 (405)
408 1boo_A Protein (N-4 cytosine-s 87.1 0.83 2.8E-05 38.6 5.3 42 96-138 29-85 (323)
409 1pjc_A Protein (L-alanine dehy 87.1 0.47 1.6E-05 40.8 3.8 97 34-138 167-268 (361)
410 2vhw_A Alanine dehydrogenase; 86.9 0.58 2E-05 40.4 4.3 97 33-137 167-268 (377)
411 2aef_A Calcium-gated potassium 86.9 4 0.00014 32.2 9.1 93 33-137 8-105 (234)
412 1zsy_A Mitochondrial 2-enoyl t 86.5 4.5 0.00015 34.3 9.7 99 31-137 165-270 (357)
413 1id1_A Putative potassium chan 86.4 4.5 0.00015 29.5 8.6 97 35-137 4-105 (153)
414 3d4o_A Dipicolinate synthase s 86.3 4.8 0.00016 33.2 9.6 89 33-137 154-244 (293)
415 1mv8_A GMD, GDP-mannose 6-dehy 85.7 5.6 0.00019 34.8 10.2 38 36-73 2-41 (436)
416 3gg2_A Sugar dehydrogenase, UD 85.7 4.5 0.00015 35.8 9.5 39 35-73 3-43 (450)
417 1zcj_A Peroxisomal bifunctiona 85.6 4.3 0.00015 36.0 9.4 89 35-135 38-148 (463)
418 2eez_A Alanine dehydrogenase; 85.5 0.69 2.4E-05 39.8 4.0 97 33-137 165-266 (369)
419 2rir_A Dipicolinate synthase, 85.4 4.5 0.00015 33.5 9.0 89 33-137 156-246 (300)
420 1x13_A NAD(P) transhydrogenase 85.4 0.53 1.8E-05 41.1 3.3 100 33-137 171-292 (401)
421 3swr_A DNA (cytosine-5)-methyl 84.8 2.3 7.9E-05 41.5 7.6 78 34-111 540-629 (1002)
422 3ic5_A Putative saccharopine d 84.7 7.2 0.00025 26.5 8.6 70 34-108 5-77 (118)
423 1f0y_A HCDH, L-3-hydroxyacyl-C 83.5 2.3 7.7E-05 35.3 6.3 37 35-71 16-54 (302)
424 3h2s_A Putative NADH-flavin re 83.2 9.3 0.00032 29.4 9.6 94 35-136 1-103 (224)
425 1bg6_A N-(1-D-carboxylethyl)-L 83.1 4.2 0.00014 34.2 8.0 95 35-135 5-107 (359)
426 3tri_A Pyrroline-5-carboxylate 83.0 7.9 0.00027 31.6 9.4 101 35-151 4-110 (280)
427 2dpo_A L-gulonate 3-dehydrogen 82.8 3.4 0.00012 34.7 7.1 38 35-72 7-46 (319)
428 2hmt_A YUAA protein; RCK, KTN, 82.5 2.8 9.6E-05 29.8 5.8 94 35-135 7-102 (144)
429 2ew2_A 2-dehydropantoate 2-red 82.5 5.7 0.00019 32.6 8.4 95 35-135 4-106 (316)
430 3dii_A Short-chain dehydrogena 82.5 6.4 0.00022 31.3 8.5 75 35-110 3-85 (247)
431 3slk_A Polyketide synthase ext 82.4 1.6 5.5E-05 41.6 5.5 98 32-139 344-444 (795)
432 1zkd_A DUF185; NESG, RPR58, st 82.3 2.1 7.3E-05 37.1 5.7 40 33-72 80-128 (387)
433 1l7d_A Nicotinamide nucleotide 82.0 2 6.8E-05 37.1 5.5 100 33-137 171-294 (384)
434 4f3n_A Uncharacterized ACR, CO 81.5 1.2 4.2E-05 39.1 4.0 38 34-71 138-182 (432)
435 4g65_A TRK system potassium up 81.1 1.5 5.3E-05 38.9 4.6 71 34-107 3-75 (461)
436 3d1l_A Putative NADP oxidoredu 81.0 5.5 0.00019 32.0 7.7 87 35-135 11-100 (266)
437 4eso_A Putative oxidoreductase 81.0 4.6 0.00016 32.4 7.1 103 33-137 7-138 (255)
438 3pid_A UDP-glucose 6-dehydroge 80.8 13 0.00045 32.6 10.4 39 34-73 36-76 (432)
439 3hwr_A 2-dehydropantoate 2-red 80.6 8.9 0.00031 31.9 9.0 108 33-151 18-133 (318)
440 3c24_A Putative oxidoreductase 80.4 4 0.00014 33.4 6.6 84 35-134 12-98 (286)
441 4fgs_A Probable dehydrogenase 79.7 6.8 0.00023 32.1 7.8 102 33-136 28-158 (273)
442 3guy_A Short-chain dehydrogena 79.7 20 0.00067 27.9 11.7 74 36-110 3-82 (230)
443 3b1f_A Putative prephenate deh 79.4 6.8 0.00023 31.9 7.8 87 35-134 7-98 (290)
444 3gt0_A Pyrroline-5-carboxylate 79.0 1.9 6.6E-05 34.5 4.2 86 35-134 3-94 (247)
445 3cea_A MYO-inositol 2-dehydrog 78.7 15 0.00052 30.6 9.9 88 34-135 8-100 (346)
446 3g0o_A 3-hydroxyisobutyrate de 78.6 18 0.0006 29.8 10.1 40 34-73 7-48 (303)
447 3mog_A Probable 3-hydroxybutyr 78.6 10 0.00035 33.8 9.1 88 35-135 6-118 (483)
448 1g60_A Adenine-specific methyl 78.5 1.7 5.8E-05 35.3 3.7 41 96-137 19-74 (260)
449 2vz8_A Fatty acid synthase; tr 78.5 5.6 0.00019 42.9 8.4 99 31-137 1665-1770(2512)
450 3ius_A Uncharacterized conserv 78.2 19 0.00064 28.8 10.1 65 35-111 6-74 (286)
451 4ft4_B DNA (cytosine-5)-methyl 78.1 4.4 0.00015 38.4 7.0 50 34-83 212-269 (784)
452 3f9i_A 3-oxoacyl-[acyl-carrier 77.6 7.2 0.00025 30.8 7.2 78 32-110 12-94 (249)
453 1eg2_A Modification methylase 77.5 1.9 6.4E-05 36.3 3.8 42 96-138 54-107 (319)
454 3gvp_A Adenosylhomocysteinase 77.1 7.1 0.00024 34.3 7.4 90 32-140 218-310 (435)
455 3ojo_A CAP5O; rossmann fold, c 76.9 20 0.00069 31.4 10.3 41 33-73 10-52 (431)
456 4b79_A PA4098, probable short- 76.8 2.8 9.4E-05 33.8 4.4 76 33-110 10-88 (242)
457 1jw9_B Molybdopterin biosynthe 76.4 15 0.00051 29.4 8.8 52 9-65 9-65 (249)
458 2hwk_A Helicase NSP2; rossman 75.8 2.6 9E-05 34.8 4.0 105 41-155 149-273 (320)
459 3qha_A Putative oxidoreductase 75.8 5.2 0.00018 32.9 6.1 86 35-135 16-103 (296)
460 3hn2_A 2-dehydropantoate 2-red 75.6 14 0.00048 30.5 8.8 91 35-136 3-102 (312)
461 3e8x_A Putative NAD-dependent 75.5 14 0.00048 28.8 8.4 70 33-110 20-94 (236)
462 1txg_A Glycerol-3-phosphate de 75.2 6.8 0.00023 32.6 6.7 93 36-135 2-102 (335)
463 4dqx_A Probable oxidoreductase 75.1 10 0.00036 30.7 7.7 77 33-110 26-111 (277)
464 3k6j_A Protein F01G10.3, confi 75.1 15 0.0005 32.6 9.0 88 35-135 55-164 (460)
465 3grk_A Enoyl-(acyl-carrier-pro 74.6 19 0.00067 29.3 9.3 103 33-137 30-169 (293)
466 3tjr_A Short chain dehydrogena 74.5 12 0.00039 30.8 7.9 77 33-110 30-118 (301)
467 4dll_A 2-hydroxy-3-oxopropiona 74.5 18 0.00061 30.1 9.1 89 33-135 30-122 (320)
468 3ktd_A Prephenate dehydrogenas 74.4 5.2 0.00018 33.9 5.7 87 34-133 8-97 (341)
469 2h78_A Hibadh, 3-hydroxyisobut 74.3 16 0.00055 29.9 8.7 39 35-73 4-44 (302)
470 3gvc_A Oxidoreductase, probabl 74.0 16 0.00053 29.7 8.5 77 33-110 28-113 (277)
471 3pxx_A Carveol dehydrogenase; 73.8 15 0.00051 29.6 8.4 103 33-137 9-153 (287)
472 3g79_A NDP-N-acetyl-D-galactos 73.7 40 0.0014 29.9 11.5 42 32-73 16-65 (478)
473 2o3j_A UDP-glucose 6-dehydroge 73.3 20 0.00067 31.9 9.5 39 35-73 10-52 (481)
474 2ag5_A DHRS6, dehydrogenase/re 72.9 6.6 0.00022 31.1 5.8 76 34-110 6-84 (246)
475 1cyd_A Carbonyl reductase; sho 72.8 19 0.00064 28.1 8.5 76 33-110 6-86 (244)
476 1xhl_A Short-chain dehydrogena 72.3 6.6 0.00022 32.3 5.8 77 33-110 25-116 (297)
477 4g81_D Putative hexonate dehyd 72.1 25 0.00086 28.3 9.1 78 33-111 8-97 (255)
478 4dcm_A Ribosomal RNA large sub 71.7 24 0.00084 30.1 9.5 106 33-154 38-152 (375)
479 3rd5_A Mypaa.01249.C; ssgcid, 71.4 16 0.00054 29.7 7.9 77 33-110 15-96 (291)
480 1dlj_A UDP-glucose dehydrogena 71.1 21 0.0007 30.9 8.9 37 36-73 2-40 (402)
481 3d3w_A L-xylulose reductase; u 71.1 22 0.00074 27.7 8.5 77 33-110 6-86 (244)
482 4a7p_A UDP-glucose dehydrogena 71.0 18 0.00063 31.8 8.6 40 34-73 8-49 (446)
483 3i83_A 2-dehydropantoate 2-red 71.0 18 0.0006 30.0 8.3 106 35-151 3-118 (320)
484 3t4x_A Oxidoreductase, short c 70.3 27 0.00093 27.8 9.1 77 33-110 9-95 (267)
485 3ado_A Lambda-crystallin; L-gu 70.1 5.7 0.00019 33.4 4.9 100 33-138 5-124 (319)
486 3mag_A VP39; methylated adenin 69.9 4.3 0.00015 33.6 3.9 48 34-82 61-114 (307)
487 3op4_A 3-oxoacyl-[acyl-carrier 69.8 15 0.0005 29.1 7.3 77 33-110 8-93 (248)
488 3ond_A Adenosylhomocysteinase; 69.6 12 0.00041 33.4 7.1 87 32-137 263-352 (488)
489 3ew7_A LMO0794 protein; Q8Y8U8 69.4 13 0.00045 28.3 6.8 93 35-136 1-101 (221)
490 3r6d_A NAD-dependent epimerase 69.2 8 0.00027 29.9 5.5 91 36-135 7-105 (221)
491 3zwc_A Peroxisomal bifunctiona 69.1 20 0.0007 33.8 8.9 96 35-137 317-429 (742)
492 3v2g_A 3-oxoacyl-[acyl-carrier 69.1 35 0.0012 27.4 9.5 104 32-137 29-165 (271)
493 3ek2_A Enoyl-(acyl-carrier-pro 69.0 21 0.00071 28.3 8.1 78 32-110 12-102 (271)
494 3ged_A Short-chain dehydrogena 68.8 15 0.0005 29.6 7.0 75 35-110 3-85 (247)
495 3oig_A Enoyl-[acyl-carrier-pro 68.7 34 0.0012 27.1 9.3 104 33-138 6-148 (266)
496 1vpd_A Tartronate semialdehyde 68.1 25 0.00084 28.6 8.5 86 35-134 6-96 (299)
497 3k96_A Glycerol-3-phosphate de 67.8 18 0.00061 30.7 7.7 94 34-135 29-131 (356)
498 3av4_A DNA (cytosine-5)-methyl 67.4 14 0.00049 37.2 7.8 77 34-111 851-940 (1330)
499 1lnq_A MTHK channels, potassiu 66.7 14 0.00049 30.7 6.9 91 34-137 115-211 (336)
500 3grp_A 3-oxoacyl-(acyl carrier 66.7 7.2 0.00025 31.5 4.8 77 33-110 26-111 (266)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=100.00 E-value=5.1e-47 Score=317.96 Aligned_cols=244 Identities=30% Similarity=0.558 Sum_probs=211.8
Q ss_pred hHHHHHHHHHhhhCCCCcHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEec
Q 024647 3 ELFIKQAKQYAETRPNYPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELT 82 (265)
Q Consensus 3 ~~f~~~a~~Y~~~rp~y~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~ 82 (265)
..|++.|+.|+++||.||++++++|....+...+|||||||+|.++..|++++.+|+|+|+|+.|++.|++.+++.+.+
T Consensus 9 d~F~~~a~~Y~~~Rp~yp~~l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~~~v~~~~- 87 (257)
T 4hg2_A 9 DHFTPVADAYRAFRPRYPRALFRWLGEVAPARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRHPRVTYAV- 87 (257)
T ss_dssp -----------CCCCCCCHHHHHHHHHHSSCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCCTTEEEEE-
T ss_pred HHHHHHHHHHHHHCCCcHHHHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhcCCceeeh-
Confidence 5799999999999999999999999999888889999999999999999999999999999999999999888999998
Q ss_pred CCccchhhhhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhhcccccCCCCCC
Q 024647 83 SPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVFQPFYTVDSDPF 162 (265)
Q Consensus 83 ~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
++++++++++++||+|+++.++||++++++++++.|+|| |||+|+++++......+.++.++++++...+.+|
T Consensus 88 ------~~~e~~~~~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (257)
T 4hg2_A 88 ------APAEDTGLPPASVDVAIAAQAMHWFDLDRFWAELRRVAR-PGAVFAAVTYGLTRVDPEVDAVVDRLYHGLLARD 160 (257)
T ss_dssp ------CCTTCCCCCSSCEEEEEECSCCTTCCHHHHHHHHHHHEE-EEEEEEEEEECCCBCCHHHHHHHHHHHHTTTGGG
T ss_pred ------hhhhhhcccCCcccEEEEeeehhHhhHHHHHHHHHHHcC-CCCEEEEEECCCCCCCHHHHHHHHHHHhcccccc
Confidence 667888999999999999999999999999999999999 9999999998877778889999988887778899
Q ss_pred cchhhhhhhhccCCCCCCCCCCCCCCCCCCCccceeeeccCHHHHHHHHHhhhHHHHHHHhCCccchHHHHHHHHHHhcc
Q 024647 163 WEPQRKLVDNKYMTIDFPFEPVDGADSTGPFDRFVIEKTMDLEGYFSYIRSWSAYQTAKDKGVELLTENVIENFRRAWNE 242 (265)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~~~~~~~~~~~~l~~~~~~~l~~~~~~ 242 (265)
|.|.+..+.+.|+.+.+||.+++.. .+.++..+++++++++++|+|.+..+.++..+.+.+++.+.+.+.|+.
T Consensus 161 ~~~~~~~~~~~y~~l~~pf~~~~~~-------~~~~~~~~tl~~~~~~l~T~S~~~~~~~~~~~d~l~~~~~~l~~~~g~ 233 (257)
T 4hg2_A 161 WPPERVHVESGYRTLPFPFPELEAP-------PLEIEERWPMDAFLGYLGTWSAVTAHRRRTGADPLAEIAPALRAAWGT 233 (257)
T ss_dssp CCSCCHHHHTTTTTSCCCSCEECCC-------CCEEEEEECHHHHHHHHTTSHHHHHHHHHHSSCHHHHHHHHHHHHHSS
T ss_pred cchhhhHHHhhhhhCCCCCccceee-------EEEEEEEecHHHHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHhcCC
Confidence 9999889999999999999887643 678889999999999999999999998876556666699999999986
Q ss_pred CCCccEEEEEeeEEEEeecC
Q 024647 243 DGQSRKVVRFPIYLRIGKVG 262 (265)
Q Consensus 243 ~~~~~~~~~~~~~~~~ark~ 262 (265)
.. ...+++|++++.+||++
T Consensus 234 ~~-~~~~v~~pi~l~~Grv~ 252 (257)
T 4hg2_A 234 PE-RPLRVTWPIAIRAGRIL 252 (257)
T ss_dssp TT-SCEEEEEEEEEEEEESS
T ss_pred CC-cEEEEEEEEEEEEEEEC
Confidence 54 36899999999999974
No 2
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.7e-34 Score=242.93 Aligned_cols=246 Identities=24% Similarity=0.472 Sum_probs=193.7
Q ss_pred HHHHHhhhCCCCcHHHHHHHHhhC-CCCCeEEEEcCCcchhHHHHHh---cCCcEEEEcCCHHHHHHHHc--------CC
Q 024647 8 QAKQYAETRPNYPEELFKFITSKT-TNHELAWDVGTGSGQAAASLSG---IFENVIGTETSPKQIEFATK--------LP 75 (265)
Q Consensus 8 ~a~~Y~~~rp~y~~~l~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~--------~~ 75 (265)
.++.|++.||.||+++++.|.... .++.+|||||||+|..+..+++ .+.+|+|+|+|+.|++.|++ ..
T Consensus 10 ~~~~y~~~rp~y~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~ 89 (299)
T 3g5t_A 10 NSERYSSSRPSYPSDFYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYK 89 (299)
T ss_dssp CHHHHHHHSCCCCHHHHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCT
T ss_pred ChHHHhhcCCCCCHHHHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCC
Confidence 578899999999999999999875 4678999999999999999995 45689999999999999875 35
Q ss_pred CceEEecCCccchhhhhhccCCC------CceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecCCCCC--ChHH
Q 024647 76 NIRYELTSPAMSIAELEQNVAAQ------STVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYTVPEV--NVSV 147 (265)
Q Consensus 76 ~~~~~~~~~~~~~~d~~~~~~~~------~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~--~~~~ 147 (265)
++.+.+ +|++++++++ ++||+|+++.++||+++..+++++.++|+ |||.|+++.+..+.. ...+
T Consensus 90 ~v~~~~-------~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~ 161 (299)
T 3g5t_A 90 NVSFKI-------SSSDDFKFLGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLR-KDGTIAIWGYADPIFPDYPEF 161 (299)
T ss_dssp TEEEEE-------CCTTCCGGGCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEE-EEEEEEEEEEEEEECTTCGGG
T ss_pred ceEEEE-------cCHHhCCccccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcC-CCcEEEEEecCCccccCcHHH
Confidence 788888 5556666555 79999999999999999999999999999 999999977654332 2455
Q ss_pred HHhhcccccC--CCCCCcc-hhhhhhhhccCCCCCCC---CCCCCCCCCC------------CCccceeeeccCHHHHHH
Q 024647 148 DAVFQPFYTV--DSDPFWE-PQRKLVDNKYMTIDFPF---EPVDGADSTG------------PFDRFVIEKTMDLEGYFS 209 (265)
Q Consensus 148 ~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~f---~~i~~~~~~~------------~~~~~~~~~~~~~~~~~~ 209 (265)
..++.++... .+.|||. |....+.+.+...+||. .+++...... ....+.....++++++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~w~~p~~~~~~~~l~~~gfp~~~f~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (299)
T 3g5t_A 162 DDLMIEVPYGKQGLGPYWEQPGRSRLRNMLKDSHLDPELFHDIQVSYFCAEDVRDKVKLHQHTKKPLLIRKQVTLVEFAD 241 (299)
T ss_dssp TTHHHHHHHCTTTTGGGSCTTHHHHHHTTTTTCCCCTTTEEEEEEEEECGGGGGCHHHHHHCSSCCCCCEEEECHHHHHH
T ss_pred HHHHHHhccCcccccchhhchhhHHHHHhhhccCCChHHcCcceEEEecccccccccccccCCCCceeeeccccHHHHHH
Confidence 5555555433 4789998 88888899999999983 5553111000 011355688999999999
Q ss_pred HHHhhhHHHHHHH--hCCc--cchHHHHHH-HHHHhccCCCccEEEEEeeEEEEeec
Q 024647 210 YIRSWSAYQTAKD--KGVE--LLTENVIEN-FRRAWNEDGQSRKVVRFPIYLRIGKV 261 (265)
Q Consensus 210 ~~~s~s~~~~~~~--~~~~--~l~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~ark 261 (265)
++++||.+..+.+ +..+ .+.+++++. +.+..+......+.+.|++++.+|||
T Consensus 242 ~l~t~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~w~~~~~~~rk 298 (299)
T 3g5t_A 242 YVRTWSAYHQWKQDPKNKDKEDVADWFIKESLRRRPELSTNTKIEVVWNTFYKLGKR 298 (299)
T ss_dssp HHTTSHHHHHHHHCGGGTTSCCHHHHHHHHHHHHCTTCCTTCCEEEEEEEEEEEEEE
T ss_pred HHHHhHHHHHHHhcccCCchhhHHHHHHHHHHHhccCCCCCCEEEEEecceeeeEec
Confidence 9999999999988 5444 566668888 77754443223689999999999998
No 3
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.95 E-value=1.5e-27 Score=199.88 Aligned_cols=242 Identities=15% Similarity=0.142 Sum_probs=166.4
Q ss_pred ChhHHHHHHHHHhhhCCCCcHHHHHHHHhh-------CCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc
Q 024647 1 MAELFIKQAKQYAETRPNYPEELFKFITSK-------TTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK 73 (265)
Q Consensus 1 ~~~~f~~~a~~Y~~~rp~y~~~l~~~l~~~-------~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (265)
|...|+..+..|++.++ ++....+.+... ..++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++
T Consensus 1 m~~~~~~~a~~y~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 79 (263)
T 2yqz_A 1 MSSALLRAAYAYDRLRA-HPPEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQ 79 (263)
T ss_dssp -CHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHH
T ss_pred CCCchHHHHHHHhhhcc-cChHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 78899999999999875 466665554433 3567899999999999999999998899999999999999875
Q ss_pred C-----CCceEEecCCccchhhhhhccCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecCCC-C----
Q 024647 74 L-----PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYTVP-E---- 142 (265)
Q Consensus 74 ~-----~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~~~-~---- 142 (265)
. +++.+.. +|++.+++++++||+|++..++||+ |+..+++++.++|+ |||.+++.....+ .
T Consensus 80 ~~~~~~~~~~~~~-------~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~ 151 (263)
T 2yqz_A 80 KIAGVDRKVQVVQ-------ADARAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLK-PGGALLEGWDQAEASPEWT 151 (263)
T ss_dssp HTTTSCTTEEEEE-------SCTTSCCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEE-EEEEEEEEEEEECCCHHHH
T ss_pred HhhccCCceEEEE-------cccccCCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCC-CCcEEEEEecCCCccHHHH
Confidence 3 5777777 6667777788899999999999999 89999999999999 9999987622221 1
Q ss_pred CChHHHHhhcccccCCCCCCcc-hhhhhhhhccCCCCCCCCCCCCCCCCCCCccceeeeccCHHHHHHHHHh--hhHHHH
Q 024647 143 VNVSVDAVFQPFYTVDSDPFWE-PQRKLVDNKYMTIDFPFEPVDGADSTGPFDRFVIEKTMDLEGYFSYIRS--WSAYQT 219 (265)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~s~~~~ 219 (265)
+...+..++..... .....+. .....+.+.+...|| +.+.. ....+....+.+++.+++.+ ++.+..
T Consensus 152 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~Gf--~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (263)
T 2yqz_A 152 LQERWRAFAAEEGF-PVERGLHAKRLKEVEEALRRLGL--KPRTR-------EVARWREERTPREALEALSERLYSFTQG 221 (263)
T ss_dssp HHHHHHHHHHHHTC-CCCCCHHHHHHHHHHHHHHHTTC--CCEEE-------EEEEEEEEECHHHHHHHHHTTCSGGGSS
T ss_pred HHHHHHHHHHHhCC-CcccccccCCHHHHHHHHHHcCC--CcceE-------EEeeeecCCCHHHHHHHHHHhhcccccC
Confidence 11223333333221 0000111 112223344444443 32221 13456667789999998874 333322
Q ss_pred HHHhCCccchHHHHHHHHHHhccCCCccEEEEEeeEEEEeecC
Q 024647 220 AKDKGVELLTENVIENFRRAWNEDGQSRKVVRFPIYLRIGKVG 262 (265)
Q Consensus 220 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ark~ 262 (265)
+.+...+.+.+++.+.+.+.++... ..+.+.|.+++.+||||
T Consensus 222 ~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~rkp 263 (263)
T 2yqz_A 222 LPEPVHARVMERLWAWAEAELGDLD-RPFPVEKRFLLRVSRLG 263 (263)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSSCTT-SCEEEEEEEEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCcC-ccccccceeEEEeeecC
Confidence 3333344555557777777776433 35899999999999997
No 4
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.91 E-value=4.3e-24 Score=180.84 Aligned_cols=232 Identities=16% Similarity=0.222 Sum_probs=143.4
Q ss_pred HHHHhh---hCCCCcHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc-CCCceEEecCC
Q 024647 9 AKQYAE---TRPNYPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK-LPNIRYELTSP 84 (265)
Q Consensus 9 a~~Y~~---~rp~y~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~ 84 (265)
+..|++ ..+.+...+++.+. ..++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++ .+++.+..
T Consensus 32 a~~y~~~~~~~~~~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~--- 106 (279)
T 3ccf_A 32 ATLYQDKHSFVWQYGEDLLQLLN--PQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNYPHLHFDV--- 106 (279)
T ss_dssp ---------CCSSSCCHHHHHHC--CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSCEEE---
T ss_pred HHHHhhcchHHHHHHHHHHHHhC--CCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhCCCCEEEE---
Confidence 456665 33344555555552 2466799999999999999999988899999999999999876 36788887
Q ss_pred ccchhhhhhccCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhh----ccccc---
Q 024647 85 AMSIAELEQNVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVF----QPFYT--- 156 (265)
Q Consensus 85 ~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~----~~~~~--- 156 (265)
+|++.+++ +++||+|++..++||+ |+..+++++.++|+ |||.+++..+..... ..+...+ .....
T Consensus 107 ----~d~~~~~~-~~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 179 (279)
T 3ccf_A 107 ----ADARNFRV-DKPLDAVFSNAMLHWVKEPEAAIASIHQALK-SGGRFVAEFGGKGNI-KYILEALYNALETLGIHNP 179 (279)
T ss_dssp ----CCTTTCCC-SSCEEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEECTTTT-HHHHHHHHHHHHHHTCCCG
T ss_pred ----CChhhCCc-CCCcCEEEEcchhhhCcCHHHHHHHHHHhcC-CCcEEEEEecCCcch-HHHHHHHHHHHHhcCCccc
Confidence 56677765 5799999999999998 89999999999999 999999877654332 2222222 21110
Q ss_pred CCCCCCcchhhhhhhhccCCCCCCCCCCCCCCCCCCCccceeeecc--CHHHHHHHHHhhhH--HHHHHHhCCccchHHH
Q 024647 157 VDSDPFWEPQRKLVDNKYMTIDFPFEPVDGADSTGPFDRFVIEKTM--DLEGYFSYIRSWSA--YQTAKDKGVELLTENV 232 (265)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~f~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~s~--~~~~~~~~~~~l~~~~ 232 (265)
....++.......+.+.+...| |+.+... .+.....+ +.+.+..++.+++. +..+.+...+.+.+.+
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~aG--f~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 250 (279)
T 3ccf_A 180 QALNPWYFPSIGEYVNILEKQG--FDVTYAA-------LFNRPTTLAEGEFGMANWIQMFASAFLVGLTPDQQVQLIRKV 250 (279)
T ss_dssp GGGCCCCCCCHHHHHHHHHHHT--EEEEEEE-------EEECCEECSSGGGHHHHHHHHHCHHHHTTCCHHHHHHHHHHH
T ss_pred cCcCceeCCCHHHHHHHHHHcC--CEEEEEE-------EecccccccCCHHHHHHHHHHhhHHHhccCCHHHHHHHHHHH
Confidence 0011111111122233333333 3222210 11112222 35677777776532 2222223334455556
Q ss_pred HHHHHHHhccCCCccEEEEEeeEEEEeecCC
Q 024647 233 IENFRRAWNEDGQSRKVVRFPIYLRIGKVGN 263 (265)
Q Consensus 233 ~~~l~~~~~~~~~~~~~~~~~~~~~~ark~~ 263 (265)
.+.+.+.+..++ .+..+|..++++||||.
T Consensus 251 ~~~~~~~~~~~g--~~~~~~~~~~v~a~Kp~ 279 (279)
T 3ccf_A 251 EATLQDKLYHQE--SWTADYRRIRIVSIKAQ 279 (279)
T ss_dssp HHHHHHHHEETT--EEEECCEEEEEEEEEC-
T ss_pred HHHHHhhccCCC--cEEEEEEEEEEEEecCC
Confidence 666666555544 68999999999999973
No 5
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=1.2e-22 Score=169.72 Aligned_cols=232 Identities=17% Similarity=0.235 Sum_probs=147.5
Q ss_pred HHHHhhhCCCCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhc--CCcEEEEcCCHHHHHHHHc-CCCceEEecC
Q 024647 9 AKQYAETRPNYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGI--FENVIGTETSPKQIEFATK-LPNIRYELTS 83 (265)
Q Consensus 9 a~~Y~~~rp~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~ 83 (265)
+..|++........ ...+.... .++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.+++ .+++.+..
T Consensus 8 ~~~y~~~~~~~~~~-~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~-- 84 (259)
T 2p35_A 8 AQQYLKFEDERTRP-ARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGK-- 84 (259)
T ss_dssp CGGGBCCCCGGGHH-HHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEE--
T ss_pred HHHHHHHHHHHHHH-HHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEE--
Confidence 67788766654333 33444443 45678999999999999999988 6789999999999999876 46788887
Q ss_pred CccchhhhhhccCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecCCCCC--ChHHHHhhcc-----cc
Q 024647 84 PAMSIAELEQNVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYTVPEV--NVSVDAVFQP-----FY 155 (265)
Q Consensus 84 ~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~--~~~~~~~~~~-----~~ 155 (265)
+|+++++ ++++||+|+++.++||+ ++..+++++.++|+ |||.+++..+..... ...+..+... ..
T Consensus 85 -----~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (259)
T 2p35_A 85 -----ADLATWK-PAQKADLLYANAVFQWVPDHLAVLSQLMDQLE-SGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAF 157 (259)
T ss_dssp -----CCTTTCC-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEE-EEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC
T ss_pred -----CChhhcC-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcC-CCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHh
Confidence 5667776 67899999999999999 89999999999999 999999877643211 1112222211 11
Q ss_pred cC---CCCCCcchhhhhhhhccCCCCCCCCCCCCCCCCCCCccceeeec-cCHHHHHHHHHhhhH--H-HHHHHhCCccc
Q 024647 156 TV---DSDPFWEPQRKLVDNKYMTIDFPFEPVDGADSTGPFDRFVIEKT-MDLEGYFSYIRSWSA--Y-QTAKDKGVELL 228 (265)
Q Consensus 156 ~~---~~~~~~~~~~~~~~~~~~~~~~~f~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~s~--~-~~~~~~~~~~l 228 (265)
.. ...+++. ...+.+.+...|| + +... ....... -+.+.+..++++.+. + ..+.+...+.+
T Consensus 158 ~~~~~~~~~~~~--~~~~~~~l~~aGf--~-v~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 225 (259)
T 2p35_A 158 SGGGLRRKPLPP--PSDYFNALSPKSS--R-VDVW-------HTVYNHPMKDADSIVEWVKGTGLRPYLAAAGEENREAF 225 (259)
T ss_dssp -------CCCCC--HHHHHHHHGGGEE--E-EEEE-------EEEEEEEESCHHHHHHHHTTTTTTHHHHTTCGGGHHHH
T ss_pred ccccccccCCCC--HHHHHHHHHhcCC--c-eEEE-------EEEeeeccCCchHHhhhhhcCcchHHHHhCCHHHHHHH
Confidence 10 0111111 1122333333332 1 1100 1111122 267888888887652 1 11222233444
Q ss_pred hHHHHHHHHHHhccCCCccEEEEEeeEEEEeecC
Q 024647 229 TENVIENFRRAWNEDGQSRKVVRFPIYLRIGKVG 262 (265)
Q Consensus 229 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ark~ 262 (265)
.+++.+.+.+.+....++.+.++|.+++++||||
T Consensus 226 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~Kp 259 (259)
T 2p35_A 226 LADYTRRIAAAYPPMADGRLLLRFPRLFVVAVKK 259 (259)
T ss_dssp HHHHHHHHHHHSCCCTTSCEEEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEeeeEEEEEecC
Confidence 4445566666655322225899999999999996
No 6
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.88 E-value=7.5e-23 Score=171.29 Aligned_cols=228 Identities=15% Similarity=0.169 Sum_probs=134.2
Q ss_pred HHhhhCCCCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC------CCceEEec
Q 024647 11 QYAETRPNYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL------PNIRYELT 82 (265)
Q Consensus 11 ~Y~~~rp~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~ 82 (265)
.|...-...+.+-++.+.... .++.+|||+|||+|.++..+++.+++|+|+|+|+.|++.+++. +++.+..
T Consensus 13 ~~~~s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~- 91 (260)
T 1vl5_A 13 MYVTSQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQ- 91 (260)
T ss_dssp ----------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE-
T ss_pred eeecCccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEE-
Confidence 344433333333333443332 4678999999999999999999999999999999999988752 5677877
Q ss_pred CCccchhhhhhccCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhhc---ccccCC
Q 024647 83 SPAMSIAELEQNVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVFQ---PFYTVD 158 (265)
Q Consensus 83 ~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~~---~~~~~~ 158 (265)
+|++.+++++++||+|+++.++||+ |+..+++++.++|| |||.|++..+..+.. ..+...+. ......
T Consensus 92 ------~d~~~l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lk-pgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 163 (260)
T 1vl5_A 92 ------GDAEQMPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLK-KGGQLLLVDNSAPEN-DAFDVFYNYVEKERDYS 163 (260)
T ss_dssp ------CCC-CCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEEBCSS-HHHHHHHHHHHHHHCTT
T ss_pred ------ecHHhCCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcC-CCCEEEEEEcCCCCC-HHHHHHHHHHHHhcCcc
Confidence 6677788888999999999999998 89999999999999 999999865543321 22222221 111111
Q ss_pred CCCCcchhhhhhhhccCCCCCCCCCCCCCCCCCCCccceeeeccCHHHHHHHHHhhhHHHHHHHhCCccchHHHHHHHHH
Q 024647 159 SDPFWEPQRKLVDNKYMTIDFPFEPVDGADSTGPFDRFVIEKTMDLEGYFSYIRSWSAYQTAKDKGVELLTENVIENFRR 238 (265)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~~~~~~~~~~~~l~~~~~~~l~~ 238 (265)
...++.+. .+.+.+...| |+.+. .......++..++...+................ ..+.+.+
T Consensus 164 ~~~~~~~~--~~~~~l~~aG--f~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 226 (260)
T 1vl5_A 164 HHRAWKKS--DWLKMLEEAG--FELEE---------LHCFHKTFIFEDWCDRMNVTTEKKQELSDFIKS----KPTEYYQ 226 (260)
T ss_dssp CCCCCBHH--HHHHHHHHHT--CEEEE---------EEEEEEEEEHHHHHHHTTCCHHHHHHHHHHHHT----SCHHHHH
T ss_pred ccCCCCHH--HHHHHHHHCC--CeEEE---------EEEeeccCCHHHHHHhcCCCHHHHHHHHHHHHh----CcHHHHH
Confidence 12222221 1223333333 32222 122233455666666555433221111111111 1233444
Q ss_pred Hhcc--CCCccEEEEEeeEEEEeecCCC
Q 024647 239 AWNE--DGQSRKVVRFPIYLRIGKVGNN 264 (265)
Q Consensus 239 ~~~~--~~~~~~~~~~~~~~~~ark~~~ 264 (265)
.+.. ..+..+.+++...+++||||..
T Consensus 227 ~~~~~~~~g~~~~~~~~~~~~~a~k~~~ 254 (260)
T 1vl5_A 227 KFKIVVEDGRVYSFRGESILMKARKPTV 254 (260)
T ss_dssp HTTCEEETTEEEEEEEEEEEEEEECCC-
T ss_pred HcceeccCCCcceEEeeEEEEEEEccch
Confidence 4443 1211378999999999999853
No 7
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.87 E-value=1.2e-21 Score=162.04 Aligned_cols=210 Identities=16% Similarity=0.184 Sum_probs=135.6
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC------CCceEEecCCccchhhhhhccCCCCceeEE
Q 024647 31 TTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL------PNIRYELTSPAMSIAELEQNVAAQSTVDLV 104 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv 104 (265)
..++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++. +++.+.. +|++.+++++++||+|
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~-------~d~~~~~~~~~~fD~v 91 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQ-------GTAESLPFPDDSFDII 91 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEE-------CBTTBCCSCTTCEEEE
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEe-------cccccCCCCCCcEEEE
Confidence 35678999999999999999999999999999999999988752 5677777 6677788888899999
Q ss_pred EeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhhcccc---cCCCCCCcchhhhhhhhccCCCCCC
Q 024647 105 TIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVFQPFY---TVDSDPFWEPQRKLVDNKYMTIDFP 180 (265)
Q Consensus 105 ~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (265)
++..++|++ ++..+++++.++|+ |||.+++.....+.. ..+...++... ......++.+ ..+.+.+...|
T Consensus 92 ~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ll~~aG-- 165 (239)
T 1xxl_A 92 TCRYAAHHFSDVRKAVREVARVLK-QDGRFLLVDHYAPED-PVLDEFVNHLNRLRDPSHVRESSL--SEWQAMFSANQ-- 165 (239)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEECBCSS-HHHHHHHHHHHHHHCTTCCCCCBH--HHHHHHHHHTT--
T ss_pred EECCchhhccCHHHHHHHHHHHcC-CCcEEEEEEcCCCCC-hhHHHHHHHHHHhccccccCCCCH--HHHHHHHHHCC--
Confidence 999999888 89999999999999 999999876653332 33333222111 1011112211 11223333333
Q ss_pred CCCCCCCCCCCCCccceeeeccCHHHHHHHHHhhhHHHHHHHhCCccchHHHHHHHHHHhccCCCccEEEEEeeEEEEee
Q 024647 181 FEPVDGADSTGPFDRFVIEKTMDLEGYFSYIRSWSAYQTAKDKGVELLTENVIENFRRAWNEDGQSRKVVRFPIYLRIGK 260 (265)
Q Consensus 181 f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ar 260 (265)
|+.+. ...+...++..++.+.+++.+............+.++.++.+...++.+| ..+.+++...++.|.
T Consensus 166 f~~~~---------~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~~~~t~~~~~~~~~ 235 (239)
T 1xxl_A 166 LAYQD---------IQKWNLPIQYDSWIKRGGTPADREKQIITHLNHASDEARDTFCITLNQNG-QPISFCLKAILIQGI 235 (239)
T ss_dssp EEEEE---------EEEEEEEEEHHHHHHHHTCCHHHHHHHHHHHHTCCHHHHHHTTCEECTTS-CEEEEEEEEEEEEEE
T ss_pred CcEEE---------EEeecCccCHHHHHHHcCCCHHHHHHHHHHHHhCCHHHHHHhCeeecCCC-CceeEEeeeeehehh
Confidence 33222 23344566778888877765543333222222222323333332211222 235899999999998
Q ss_pred cCC
Q 024647 261 VGN 263 (265)
Q Consensus 261 k~~ 263 (265)
|.+
T Consensus 236 k~~ 238 (239)
T 1xxl_A 236 KRE 238 (239)
T ss_dssp ECB
T ss_pred ccC
Confidence 864
No 8
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.82 E-value=2.8e-20 Score=155.91 Aligned_cols=126 Identities=21% Similarity=0.280 Sum_probs=102.0
Q ss_pred HHHHHHHHHhhhCCCCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEe
Q 024647 4 LFIKQAKQYAETRPNYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKLPNIRYEL 81 (265)
Q Consensus 4 ~f~~~a~~Y~~~rp~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 81 (265)
.|+..+..|++.++.++ .+.+.+.... .++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.++...++.+..
T Consensus 4 ~y~~~a~~y~~~~~~~~-~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~ 82 (261)
T 3ege_A 4 IYNSIGKQYSQTRVPDI-RIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHPQVEWFT 82 (261)
T ss_dssp ---------CCSBCCCH-HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCTTEEEEC
T ss_pred HHHHHHHHHhhcccccH-HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhccCCEEEE
Confidence 68999999999999864 5777776665 56789999999999999999998889999999999999998777888887
Q ss_pred cCCccchhhhhhccCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 82 TSPAMSIAELEQNVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 82 ~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|++++++++++||+|++..++|++ ++..+++++.++|| ||.+++..+.
T Consensus 83 -------~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk--gG~~~~~~~~ 132 (261)
T 3ege_A 83 -------GYAENLALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR--DGTIVLLTFD 132 (261)
T ss_dssp -------CCTTSCCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC--SSCEEEEEEC
T ss_pred -------CchhhCCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC--CcEEEEEEcC
Confidence 6677788888999999999999988 89999999999998 8877776654
No 9
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.81 E-value=1.4e-19 Score=149.48 Aligned_cols=130 Identities=16% Similarity=0.253 Sum_probs=101.2
Q ss_pred hHHHHHHHHHhhh-----CCCCcHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC---
Q 024647 3 ELFIKQAKQYAET-----RPNYPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL--- 74 (265)
Q Consensus 3 ~~f~~~a~~Y~~~-----rp~y~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--- 74 (265)
+.|+..+..|+.. .......+++++....+++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++.
T Consensus 18 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~ 97 (242)
T 3l8d_A 18 KKWDSSAEFWNQNSQEMWDSGSRSTIIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEG 97 (242)
T ss_dssp --------------CHHHHTSTTTTHHHHHHHHSCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTCB
T ss_pred HHHHhHHHHhhhhhhhccCcccHHHHHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhccc
Confidence 4566666666652 12334567888888888889999999999999999999989999999999999999864
Q ss_pred CCceEEecCCccchhhhhhccCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 75 PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
.++.+.. +|+.++++++++||+|++..++|++ ++..+++++.++|+ |||.+++..+..
T Consensus 98 ~~~~~~~-------~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~ 156 (242)
T 3l8d_A 98 PDLSFIK-------GDLSSLPFENEQFEAIMAINSLEWTEEPLRALNEIKRVLK-SDGYACIAILGP 156 (242)
T ss_dssp TTEEEEE-------CBTTBCSSCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEE-EEEEEEEEEECT
T ss_pred CCceEEE-------cchhcCCCCCCCccEEEEcChHhhccCHHHHHHHHHHHhC-CCeEEEEEEcCC
Confidence 5677777 6777777788999999999999998 88899999999999 999999877653
No 10
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.80 E-value=5.3e-19 Score=148.15 Aligned_cols=123 Identities=15% Similarity=0.281 Sum_probs=96.0
Q ss_pred HHHHHHhh----hCCCCcHHHHHHH----HhhCCCCCeEEEEcCCcchhHHHHHhcC----CcEEEEcCCHHHHHHHHcC
Q 024647 7 KQAKQYAE----TRPNYPEELFKFI----TSKTTNHELAWDVGTGSGQAAASLSGIF----ENVIGTETSPKQIEFATKL 74 (265)
Q Consensus 7 ~~a~~Y~~----~rp~y~~~l~~~l----~~~~~~~~~vlDvGcG~G~~~~~l~~~~----~~v~~vD~s~~~~~~a~~~ 74 (265)
+.|+.|+. .-|.|. ++.+.+ ..+.+++.+|||||||+|..+..+++++ .+|+|||+|+.|++.|++.
T Consensus 37 ~va~~fdd~i~rsvP~Y~-~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~ 115 (261)
T 4gek_A 37 RVAEVFPDMIQRSVPGYS-NIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRH 115 (261)
T ss_dssp HHHHHHHHHHHHHSTTHH-HHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHH
T ss_pred chhhhhhhhHhhcCCCHH-HHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHH
Confidence 45777764 568884 333332 2345788999999999999999999864 3799999999999998752
Q ss_pred -------CCceEEecCCccchhhhhhccCCCCceeEEEeccccccCCh---hHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 75 -------PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDL---PQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 75 -------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~~---~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
.++++.+ +|+.++++ +++|+|++++++|++++ ..++++++++|| |||.|++.....
T Consensus 116 ~~~~~~~~~v~~~~-------~D~~~~~~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~Lk-pGG~lii~e~~~ 181 (261)
T 4gek_A 116 IDAYKAPTPVDVIE-------GDIRDIAI--ENASMVVLNFTLQFLEPSERQALLDKIYQGLN-PGGALVLSEKFS 181 (261)
T ss_dssp HHTSCCSSCEEEEE-------SCTTTCCC--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEBC
T ss_pred HHhhccCceEEEee-------cccccccc--cccccceeeeeeeecCchhHhHHHHHHHHHcC-CCcEEEEEeccC
Confidence 3577777 66777654 56999999999999843 368999999999 999999876543
No 11
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.79 E-value=3.5e-19 Score=144.24 Aligned_cols=126 Identities=18% Similarity=0.190 Sum_probs=105.6
Q ss_pred hHHHHHHHHHhhhCCCCcHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEec
Q 024647 3 ELFIKQAKQYAETRPNYPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELT 82 (265)
Q Consensus 3 ~~f~~~a~~Y~~~rp~y~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~ 82 (265)
+.|+..+..|+..... ...+..+....+++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++..++.+..
T Consensus 15 ~~~~~~~~~y~~~~~~--~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~- 91 (211)
T 3e23_A 15 RFYRGNATAYAERQPR--SATLTKFLGELPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRLGRPVRT- 91 (211)
T ss_dssp HHHHHSHHHHTTCCCC--CHHHHHHHTTSCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEE-
T ss_pred HHHHHHHHHHhhccch--hHHHHHHHHhcCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhcCCceEE-
Confidence 5788888999886665 4555566666677889999999999999999999889999999999999998754666666
Q ss_pred CCccchhhhhhccCCCCceeEEEeccccccC---ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 83 SPAMSIAELEQNVAAQSTVDLVTIAQAMHWF---DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 83 ~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~---~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|+..++ ++++||+|++..++|++ +...+++++.++|+ |||.+++....
T Consensus 92 ------~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 143 (211)
T 3e23_A 92 ------MLFHQLD-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALK-PGGLFYASYKS 143 (211)
T ss_dssp ------CCGGGCC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred ------eeeccCC-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcC-CCcEEEEEEcC
Confidence 6667776 77899999999999998 45689999999999 99999986543
No 12
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.79 E-value=4.3e-19 Score=142.83 Aligned_cols=130 Identities=12% Similarity=0.209 Sum_probs=103.4
Q ss_pred hhHHHHHHHHHhhhCCCC------cHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc-C
Q 024647 2 AELFIKQAKQYAETRPNY------PEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK-L 74 (265)
Q Consensus 2 ~~~f~~~a~~Y~~~rp~y------~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~ 74 (265)
.+.|+..+..|+...+.. ...++..+... .+.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++ .
T Consensus 6 ~~~y~~~a~~y~~~~~~~~~~~~~~~~~l~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~ 83 (203)
T 3h2b_A 6 SKAYSSPTFDAEALLGTVISAEDPDRVLIEPWATG--VDGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTH 83 (203)
T ss_dssp HHHHHCTTTCHHHHTCSSCCTTCTTHHHHHHHHHH--CCSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHC
T ss_pred HHHHhhHHHHHHHHhhhhccccHHHHHHHHHHhcc--CCCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC
Confidence 356777888886643321 12333333332 26789999999999999999998899999999999999986 4
Q ss_pred CCceEEecCCccchhhhhhccCCCCceeEEEeccccccC---ChhHHHHHHHHHhcCCCcEEEEEecCCC
Q 024647 75 PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWF---DLPQFYNQVKWVLKKPNGVIATWCYTVP 141 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~---~~~~~l~~~~~~Lk~pgG~l~~~~~~~~ 141 (265)
+++.+.. +|+.++++++++||+|++..++|++ ++..+++++.++|+ |||.+++..+...
T Consensus 84 ~~~~~~~-------~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 84 PSVTFHH-------GTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVE-DGGGLLMSFFSGP 145 (203)
T ss_dssp TTSEEEC-------CCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEE-EEEEEEEEEECCS
T ss_pred CCCeEEe-------CcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcC-CCcEEEEEEccCC
Confidence 6788887 6667777788999999999999988 67789999999999 9999998776543
No 13
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.79 E-value=4.7e-18 Score=144.77 Aligned_cols=100 Identities=21% Similarity=0.204 Sum_probs=87.9
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-CCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCCCceeE
Q 024647 32 TNHELAWDVGTGSGQAAASLSGI-FENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQSTVDL 103 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dl 103 (265)
.++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.+++. .++.+.. +|+.++++++++||+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-------~d~~~~~~~~~~fD~ 153 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKY-------GSFLEIPCEDNSYDF 153 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEE-------CCTTSCSSCTTCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE-------cCcccCCCCCCCEeE
Confidence 56789999999999999999987 66999999999999988752 4678877 666778888899999
Q ss_pred EEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 104 VTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 104 v~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
|++..++|++ ++..+++++.++|| |||.+++..+.
T Consensus 154 v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 189 (297)
T 2o57_A 154 IWSQDAFLHSPDKLKVFQECARVLK-PRGVMAITDPM 189 (297)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEE
T ss_pred EEecchhhhcCCHHHHHHHHHHHcC-CCeEEEEEEec
Confidence 9999999988 88999999999999 99999987654
No 14
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.79 E-value=1.4e-18 Score=146.12 Aligned_cols=110 Identities=21% Similarity=0.269 Sum_probs=91.7
Q ss_pred HHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhc-CCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhh
Q 024647 22 ELFKFITSKT--TNHELAWDVGTGSGQAAASLSGI-FENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAEL 91 (265)
Q Consensus 22 ~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~ 91 (265)
.+.+.+.... .++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++. .++.+.. +|+
T Consensus 48 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-------~d~ 120 (273)
T 3bus_A 48 RLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSY-------ADA 120 (273)
T ss_dssp HHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE-------CCT
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE-------Ccc
Confidence 3444555544 46789999999999999999985 56899999999999988752 3577777 666
Q ss_pred hhccCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 92 EQNVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 92 ~~~~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
.++++++++||+|++..++|++ ++..+++++.++|+ |||.+++..+.
T Consensus 121 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~ 168 (273)
T 3bus_A 121 MDLPFEDASFDAVWALESLHHMPDRGRALREMARVLR-PGGTVAIADFV 168 (273)
T ss_dssp TSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEE-EEEEEEEEEEE
T ss_pred ccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcC-CCeEEEEEEee
Confidence 7777788899999999999999 89999999999999 99999986654
No 15
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.78 E-value=6.5e-19 Score=149.30 Aligned_cols=129 Identities=19% Similarity=0.307 Sum_probs=101.2
Q ss_pred hHHHHHHHHHhhhCCCCcHHHH----------HHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHH
Q 024647 3 ELFIKQAKQYAETRPNYPEELF----------KFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFAT 72 (265)
Q Consensus 3 ~~f~~~a~~Y~~~rp~y~~~l~----------~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~ 72 (265)
..|+..+..|+......+.... ..+....+++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.++
T Consensus 28 ~~fd~~a~~y~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~ 107 (285)
T 4htf_A 28 RNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAK 107 (285)
T ss_dssp ----CHHHHHHSCTTSCHHHHHHHHHHHHHHHHHHHHTCSSCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred cchhhHHHHHHHHhccCCcchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 5688899999986655443322 222223345679999999999999999999889999999999999987
Q ss_pred cC-------CCceEEecCCccchhhhhhcc-CCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 73 KL-------PNIRYELTSPAMSIAELEQNV-AAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 73 ~~-------~~~~~~~~~~~~~~~d~~~~~-~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+. +++.+.. +|+.+++ +++++||+|++..++|++ ++..+++++.++|+ |||.+++..+.
T Consensus 108 ~~~~~~~~~~~v~~~~-------~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 175 (285)
T 4htf_A 108 QAAEAKGVSDNMQFIH-------CAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLR-PGGVLSLMFYN 175 (285)
T ss_dssp HHHHC-CCGGGEEEEE-------SCGGGTGGGCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEE-EEEEEEEEEEB
T ss_pred HHHHhcCCCcceEEEE-------cCHHHhhhhcCCCceEEEECchhhcccCHHHHHHHHHHHcC-CCeEEEEEEeC
Confidence 52 4677777 5566665 567899999999999999 89999999999999 99999987664
No 16
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.77 E-value=1.9e-18 Score=140.65 Aligned_cols=126 Identities=18% Similarity=0.209 Sum_probs=90.2
Q ss_pred hHHHHHHHHHhhhC----CCCc------HHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHH
Q 024647 3 ELFIKQAKQYAETR----PNYP------EELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFAT 72 (265)
Q Consensus 3 ~~f~~~a~~Y~~~r----p~y~------~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~ 72 (265)
+.|+..++.|+... +.|. ..+++.+.. .++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.++
T Consensus 7 ~~f~~~a~~y~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~ 84 (220)
T 3hnr_A 7 GLFDEWAHTYDSFVQGEDIQYKEVFAHYEDILEDVVN--KSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAK 84 (220)
T ss_dssp -----------------CCTTTTTTTTHHHHHHHHHH--TCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHhHHHHHHHHHHHHHHhhc--cCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 56888888898743 2222 244444432 36679999999999999999999889999999999999998
Q ss_pred cC-C-CceEEecCCccchhhhhhccCCCCceeEEEeccccccC-ChhH--HHHHHHHHhcCCCcEEEEEecC
Q 024647 73 KL-P-NIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWF-DLPQ--FYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 73 ~~-~-~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~-~~~~--~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+. . ++.+.. +|+.+++.+ ++||+|++..++|++ ++.. +++++.++|| |||.+++..+.
T Consensus 85 ~~~~~~~~~~~-------~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~ 147 (220)
T 3hnr_A 85 EKLPKEFSITE-------GDFLSFEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLN-KGGKIVFADTI 147 (220)
T ss_dssp HHSCTTCCEES-------CCSSSCCCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSC-TTCEEEEEEEC
T ss_pred HhCCCceEEEe-------CChhhcCCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcC-CCCEEEEEecc
Confidence 63 3 677776 666777766 899999999999999 5555 9999999999 99999987654
No 17
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.77 E-value=2.1e-18 Score=144.84 Aligned_cols=124 Identities=19% Similarity=0.188 Sum_probs=99.5
Q ss_pred HHHHHHHhh---hCCCCcHHHHHHHHhhC---CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC----
Q 024647 6 IKQAKQYAE---TRPNYPEELFKFITSKT---TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL---- 74 (265)
Q Consensus 6 ~~~a~~Y~~---~rp~y~~~l~~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~---- 74 (265)
+..++.|+. ..|.++ .....+.... +++.+|||||||+|.++..+++... +|+|+|+|+.|++.+++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~ 92 (267)
T 3kkz_A 14 NLICDFFSNMERQGPGSP-EVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQS 92 (267)
T ss_dssp HHHHHHHHTSSCSSSCCH-HHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhccccCCCCH-HHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHc
Confidence 345555554 556554 4444444443 4678999999999999999998855 899999999999988752
Q ss_pred ---CCceEEecCCccchhhhhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 75 ---PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 75 ---~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+++.+.. +|+.++++++++||+|++..++|++++..+++++.++|+ |||.+++.++
T Consensus 93 ~~~~~v~~~~-------~d~~~~~~~~~~fD~i~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~ 151 (267)
T 3kkz_A 93 GLQNRVTGIV-------GSMDDLPFRNEELDLIWSEGAIYNIGFERGLNEWRKYLK-KGGYLAVSEC 151 (267)
T ss_dssp TCTTTEEEEE-------CCTTSCCCCTTCEEEEEESSCGGGTCHHHHHHHHGGGEE-EEEEEEEEEE
T ss_pred CCCcCcEEEE-------cChhhCCCCCCCEEEEEEcCCceecCHHHHHHHHHHHcC-CCCEEEEEEe
Confidence 4578887 666777777889999999999999999999999999999 9999998654
No 18
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.77 E-value=1e-18 Score=141.49 Aligned_cols=127 Identities=17% Similarity=0.187 Sum_probs=101.2
Q ss_pred HHHHHHHHHhhhCCCCcHH-----HHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC-CC
Q 024647 4 LFIKQAKQYAETRPNYPEE-----LFKFITSKTTNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL-PN 76 (265)
Q Consensus 4 ~f~~~a~~Y~~~rp~y~~~-----l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-~~ 76 (265)
.|+..|..|+......... ..+.+....+++.+|||+|||+|..+..+ .. +++|+|+|+.|++.+++. ++
T Consensus 2 ~fd~~a~~y~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~~~ 78 (211)
T 2gs9_A 2 PFASLAEAYEAWYGTPLGAYVIAEEERALKGLLPPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRAPE 78 (211)
T ss_dssp TTTTTTTTTTGGGGSHHHHHHHHHHHHHHHTTCCCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHCTT
T ss_pred chhhHHHHHHHHhcccchhhhHHHHHHHHHHhcCCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhCCC
Confidence 4677788888754432211 22344444567789999999999999988 45 899999999999998863 57
Q ss_pred ceEEecCCccchhhhhhccCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecCCC
Q 024647 77 IRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYTVP 141 (265)
Q Consensus 77 ~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~~~ 141 (265)
+.+.. +|+.++++++++||+|++..++|++ ++..+++++.++|+ |||.+++..+...
T Consensus 79 ~~~~~-------~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 79 ATWVR-------AWGEALPFPGESFDVVLLFTTLEFVEDVERVLLEARRVLR-PGGALVVGVLEAL 136 (211)
T ss_dssp SEEEC-------CCTTSCCSCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEE-EEEEEEEEEECTT
T ss_pred cEEEE-------cccccCCCCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcC-CCCEEEEEecCCc
Confidence 77777 6667777788899999999999999 89999999999999 9999999777543
No 19
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.76 E-value=6.9e-19 Score=142.09 Aligned_cols=108 Identities=16% Similarity=0.066 Sum_probs=86.3
Q ss_pred cHHHHHHHHhhC-CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC------------------CCceEE
Q 024647 20 PEELFKFITSKT-TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL------------------PNIRYE 80 (265)
Q Consensus 20 ~~~l~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------------------~~~~~~ 80 (265)
.+.+.+++.... +++.+|||+|||+|..+..|++++.+|+|+|+|+.|++.|++. .++++.
T Consensus 8 ~~~l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~ 87 (203)
T 1pjz_A 8 NKDLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIW 87 (203)
T ss_dssp THHHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEE
T ss_pred CHHHHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEE
Confidence 345566655442 4678999999999999999999999999999999999998752 245555
Q ss_pred ecCCccchhhhhhccCCC-CceeEEEeccccccCCh---hHHHHHHHHHhcCCCcEEEE
Q 024647 81 LTSPAMSIAELEQNVAAQ-STVDLVTIAQAMHWFDL---PQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 81 ~~~~~~~~~d~~~~~~~~-~~~Dlv~~~~~~~~~~~---~~~l~~~~~~Lk~pgG~l~~ 135 (265)
+ +|+.+++.++ ++||+|++..++|+++. ..+++++.++|| |||.+++
T Consensus 88 ~-------~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lk-pgG~~~l 138 (203)
T 1pjz_A 88 C-------GDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMP-QACSGLL 138 (203)
T ss_dssp E-------ECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSC-SEEEEEE
T ss_pred E-------CccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcC-CCcEEEE
Confidence 5 7777776554 78999999999998843 468999999999 9998444
No 20
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.76 E-value=1.4e-18 Score=143.70 Aligned_cols=129 Identities=16% Similarity=0.187 Sum_probs=92.8
Q ss_pred hHHHHHHHHHhhhCCC---CcHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC-C-Cc
Q 024647 3 ELFIKQAKQYAETRPN---YPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL-P-NI 77 (265)
Q Consensus 3 ~~f~~~a~~Y~~~rp~---y~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-~-~~ 77 (265)
+.|+..+..|+. .+. .-..+.+.+... .++.+|||||||+|.++..+++.+++|+|+|+|+.|++.|++. . ++
T Consensus 11 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~v 88 (250)
T 2p7i_A 11 EIKDTAGHKYAY-NFDFDVMHPFMVRAFTPF-FRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKDGI 88 (250)
T ss_dssp -------------CHHHHTHHHHHHHHHGGG-CCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCSCE
T ss_pred HHHhhHHHHhcC-ccchhhHHHHHHHHHHhh-cCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhCCe
Confidence 345555666643 110 012233333332 4567899999999999999999999999999999999999863 2 67
Q ss_pred eEEecCCccchhhhhhccCCCCceeEEEeccccccC-ChhHHHHHHH-HHhcCCCcEEEEEecCCCC
Q 024647 78 RYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWF-DLPQFYNQVK-WVLKKPNGVIATWCYTVPE 142 (265)
Q Consensus 78 ~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~-~~Lk~pgG~l~~~~~~~~~ 142 (265)
.+.. +|++++ .++++||+|++..++|++ |+..+++++. ++|| |||.+++..+....
T Consensus 89 ~~~~-------~d~~~~-~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~Lk-pgG~l~i~~~~~~~ 146 (250)
T 2p7i_A 89 TYIH-------SRFEDA-QLPRRYDNIVLTHVLEHIDDPVALLKRINDDWLA-EGGRLFLVCPNANA 146 (250)
T ss_dssp EEEE-------SCGGGC-CCSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEE-EEEEEEEEEECTTC
T ss_pred EEEE-------ccHHHc-CcCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcC-CCCEEEEEcCChHH
Confidence 7777 566666 467899999999999999 8999999999 9999 99999998776443
No 21
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.76 E-value=1.1e-18 Score=146.09 Aligned_cols=127 Identities=17% Similarity=0.248 Sum_probs=101.1
Q ss_pred HHH-HHHHHHhhhC----CCC---cHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc-C
Q 024647 4 LFI-KQAKQYAETR----PNY---PEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK-L 74 (265)
Q Consensus 4 ~f~-~~a~~Y~~~r----p~y---~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~ 74 (265)
.|+ ..+..|+... +.| ...+.+.+....+++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.|++ .
T Consensus 13 ~y~~~~a~~yd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~ 92 (263)
T 3pfg_A 13 DYSGEIAELYDLVHQGKGKDYHREAADLAALVRRHSPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRN 92 (263)
T ss_dssp SCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHC
T ss_pred ccchhHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhC
Confidence 355 6677777733 333 234455555566777899999999999999999999999999999999999986 4
Q ss_pred CCceEEecCCccchhhhhhccCCCCceeEEEecc-ccccC----ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 75 PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ-AMHWF----DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~-~~~~~----~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+++.+.. +|+..++. +++||+|++.. ++|++ +...+++++.++|+ |||.+++..+.
T Consensus 93 ~~~~~~~-------~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~ 153 (263)
T 3pfg_A 93 PDAVLHH-------GDMRDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVL-PDGVVVVEPWW 153 (263)
T ss_dssp TTSEEEE-------CCTTTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEE-EEEEEEECCCC
T ss_pred CCCEEEE-------CChHHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcC-CCcEEEEEecc
Confidence 6788887 66677765 68999999998 99998 34478999999999 99999986443
No 22
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.76 E-value=7e-18 Score=136.84 Aligned_cols=128 Identities=18% Similarity=0.225 Sum_probs=100.2
Q ss_pred hHHHHHHHHHhhhCC----CCcHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC--CC
Q 024647 3 ELFIKQAKQYAETRP----NYPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL--PN 76 (265)
Q Consensus 3 ~~f~~~a~~Y~~~rp----~y~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--~~ 76 (265)
..|+..+..|+.... ..-..+.+.+.. .+++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++. .+
T Consensus 13 ~~~~~~a~~y~~~~~~~~~~~~~~~~~~l~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~ 91 (218)
T 3ou2_A 13 SYYRARASEYDATFVPYMDSAAPAALERLRA-GNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGRHGLDN 91 (218)
T ss_dssp HHHHHHGGGHHHHHHHHHTTTHHHHHHHHTT-TTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGGGCCTT
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHhcCCCC
Confidence 456777777766221 122233433332 35667999999999999999999988999999999999999862 56
Q ss_pred ceEEecCCccchhhhhhccCCCCceeEEEeccccccCCh---hHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 77 IRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDL---PQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 77 ~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~~---~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
+.+.. +|+.++ .++++||+|+++.++|+++. ..+++++.++|+ |||.+++..+..
T Consensus 92 ~~~~~-------~d~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~ 149 (218)
T 3ou2_A 92 VEFRQ-------QDLFDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVA-PGGVVEFVDVTD 149 (218)
T ss_dssp EEEEE-------CCTTSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEECC
T ss_pred eEEEe-------cccccC-CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcC-CCeEEEEEeCCC
Confidence 77777 566666 57889999999999999944 789999999999 999999877764
No 23
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.76 E-value=4.4e-18 Score=139.89 Aligned_cols=131 Identities=21% Similarity=0.299 Sum_probs=103.5
Q ss_pred hhHHHHHHHHHhhh----CCCCcHHHHHHHHhhC---CCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHH
Q 024647 2 AELFIKQAKQYAET----RPNYPEELFKFITSKT---TNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFAT 72 (265)
Q Consensus 2 ~~~f~~~a~~Y~~~----rp~y~~~l~~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~ 72 (265)
.+.|+..+..|+.. .|.| ....+.+.... .++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.++
T Consensus 7 ~~~f~~~a~~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~ 85 (234)
T 3dtn_A 7 KRKFDAVSGKYDEQRRKFIPCF-DDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAK 85 (234)
T ss_dssp CCCCCHHHHHHHHHHHHHCTTH-HHHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHhCcCH-HHHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence 35788889999873 3443 44445555443 466899999999999999999984 58999999999999987
Q ss_pred cC----CCceEEecCCccchhhhhhccCCCCceeEEEeccccccCChh---HHHHHHHHHhcCCCcEEEEEecCCCC
Q 024647 73 KL----PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLP---QFYNQVKWVLKKPNGVIATWCYTVPE 142 (265)
Q Consensus 73 ~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~~~---~~l~~~~~~Lk~pgG~l~~~~~~~~~ 142 (265)
+. .++.+.. +|+.+++.+ ++||+|++..++|+++.. .+++++.++|+ |||.+++.++..+.
T Consensus 86 ~~~~~~~~~~~~~-------~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 86 NRFRGNLKVKYIE-------ADYSKYDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILK-ESGIFINADLVHGE 153 (234)
T ss_dssp HHTCSCTTEEEEE-------SCTTTCCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEECBCS
T ss_pred HhhccCCCEEEEe-------CchhccCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcC-CCcEEEEEEecCCC
Confidence 62 3677777 666777655 899999999999999443 49999999999 99999987765443
No 24
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.76 E-value=2.7e-18 Score=139.25 Aligned_cols=116 Identities=16% Similarity=0.191 Sum_probs=94.2
Q ss_pred hCCCCcHHHHHHHHhhC-CCCCeEEEEcCCcchhHHHHHhc-CCcEEEEcCCHHHHHHHHcC-------CCceEEecCCc
Q 024647 15 TRPNYPEELFKFITSKT-TNHELAWDVGTGSGQAAASLSGI-FENVIGTETSPKQIEFATKL-------PNIRYELTSPA 85 (265)
Q Consensus 15 ~rp~y~~~l~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~ 85 (265)
.+|.| +.+.+.+.... .++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.+++. .++.+..
T Consensus 25 ~~~~~-~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~---- 99 (219)
T 3dlc_A 25 FAPIY-PIIAENIINRFGITAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQ---- 99 (219)
T ss_dssp TTTHH-HHHHHHHHHHHCCCEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE----
T ss_pred hcccc-HHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEE----
Confidence 44544 34555555443 33449999999999999999987 45899999999999988753 3677777
Q ss_pred cchhhhhhccCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 86 MSIAELEQNVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 86 ~~~~d~~~~~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|+.++++++++||+|++..++|++ ++..+++++.++|+ |||.+++....
T Consensus 100 ---~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 150 (219)
T 3dlc_A 100 ---GDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILK-SGGKTYIGGGF 150 (219)
T ss_dssp ---CBTTBCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEECC
T ss_pred ---cCHHHCCCCcccccEEEECchHhhccCHHHHHHHHHHhCC-CCCEEEEEecc
Confidence 6677777888999999999999998 88999999999999 99999986643
No 25
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.76 E-value=5.4e-18 Score=141.84 Aligned_cols=129 Identities=16% Similarity=0.183 Sum_probs=103.2
Q ss_pred hHHHHHHHHHhhhCCCC-----cHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCc
Q 024647 3 ELFIKQAKQYAETRPNY-----PEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKLPNI 77 (265)
Q Consensus 3 ~~f~~~a~~Y~~~rp~y-----~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~ 77 (265)
..|+..++.|++..... .+.+.+.+....+++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++....
T Consensus 19 ~~~~~~a~~Yd~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~ 98 (260)
T 2avn_A 19 EFYDRIARAYDSMYETPKWKLYHRLIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVK 98 (260)
T ss_dssp HHHHHHHHHHGGGGCSHHHHHHHHHHHHHHHHHCCSCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCS
T ss_pred chhhHHHHHHHHhccccchhHHHHHHHHHHHHhcCCCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcCC
Confidence 57888999999865321 1234555555556778999999999999999999988999999999999999863222
Q ss_pred eEEecCCccchhhhhhccCCCCceeEEEecc-ccccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 78 RYELTSPAMSIAELEQNVAAQSTVDLVTIAQ-AMHWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 78 ~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~-~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
.+.. +|+..+++++++||+|++.. ..|+. ++..+++++.++|+ |||.+++..++
T Consensus 99 ~~~~-------~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 154 (260)
T 2avn_A 99 NVVE-------AKAEDLPFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLV-PDGLLIATVDN 154 (260)
T ss_dssp CEEE-------CCTTSCCSCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEE-EEEEEEEEEEB
T ss_pred CEEE-------CcHHHCCCCCCCEEEEEEcchhhhccccHHHHHHHHHHHcC-CCeEEEEEeCC
Confidence 2555 66677777788999999986 56776 88899999999999 99999987654
No 26
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.75 E-value=6.7e-18 Score=140.63 Aligned_cols=122 Identities=18% Similarity=0.168 Sum_probs=98.7
Q ss_pred HHHHHhh---hCCCCcHHHHHHHHhhC---CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC------
Q 024647 8 QAKQYAE---TRPNYPEELFKFITSKT---TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL------ 74 (265)
Q Consensus 8 ~a~~Y~~---~rp~y~~~l~~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------ 74 (265)
..+.|+. .+|.+ ......+.... +++.+|||+|||+|..+..+++.++ +|+|+|+|+.+++.+++.
T Consensus 16 ~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 94 (257)
T 3f4k_A 16 ICNYFKLLKRQGPGS-PEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANC 94 (257)
T ss_dssp HHHHHTTSSCSSSCC-HHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCccccCCCC-HHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCC
Confidence 4444544 45664 44555555443 4667999999999999999999876 899999999999988752
Q ss_pred -CCceEEecCCccchhhhhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 75 -PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 75 -~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.++.+.. +|+..+++++++||+|++..++|++++..+++++.++|+ |||.+++.++
T Consensus 95 ~~~~~~~~-------~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~-pgG~l~~~~~ 151 (257)
T 3f4k_A 95 ADRVKGIT-------GSMDNLPFQNEELDLIWSEGAIYNIGFERGMNEWSKYLK-KGGFIAVSEA 151 (257)
T ss_dssp TTTEEEEE-------CCTTSCSSCTTCEEEEEEESCSCCCCHHHHHHHHHTTEE-EEEEEEEEEE
T ss_pred CCceEEEE-------CChhhCCCCCCCEEEEEecChHhhcCHHHHHHHHHHHcC-CCcEEEEEEe
Confidence 2377777 667777778899999999999999999999999999999 9999998664
No 27
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.75 E-value=2.7e-18 Score=142.98 Aligned_cols=124 Identities=15% Similarity=0.115 Sum_probs=98.8
Q ss_pred HHHHHHHHhhhCCCCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhc-CCcEEEEcCCHHHHHHHHcC-------
Q 024647 5 FIKQAKQYAETRPNYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGI-FENVIGTETSPKQIEFATKL------- 74 (265)
Q Consensus 5 f~~~a~~Y~~~rp~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~------- 74 (265)
|+.....+...+|.++ ..++.+.... +++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.+++.
T Consensus 7 ~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~ 85 (256)
T 1nkv_A 7 FTISESEHRIHNPFTE-EKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVS 85 (256)
T ss_dssp HHHHTSSCSSSSSCCH-HHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCT
T ss_pred cccccCCccccCCCCH-HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCC
Confidence 3333444555778765 4455555543 46789999999999999999987 45899999999999988752
Q ss_pred CCceEEecCCccchhhhhhccCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 75 PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.++.+.. +|+++++. +++||+|++..++|++ ++..+++++.++|| |||.+++..+
T Consensus 86 ~~v~~~~-------~d~~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lk-pgG~l~~~~~ 141 (256)
T 1nkv_A 86 ERVHFIH-------NDAAGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLK-PGGIMLIGEP 141 (256)
T ss_dssp TTEEEEE-------SCCTTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEE-EEEEEEEEEE
T ss_pred cceEEEE-------CChHhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcC-CCeEEEEecC
Confidence 3678887 56667765 7899999999999988 89999999999999 9999998654
No 28
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.75 E-value=1.2e-17 Score=136.20 Aligned_cols=131 Identities=16% Similarity=0.214 Sum_probs=99.9
Q ss_pred hHHHHHHHHHhhh--CCCCcH-------HHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc
Q 024647 3 ELFIKQAKQYAET--RPNYPE-------ELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK 73 (265)
Q Consensus 3 ~~f~~~a~~Y~~~--rp~y~~-------~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (265)
+.|+..+..|+.. ...+.. .+++.+.. .++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 92 (227)
T 3e8s_A 15 DSWHQNAQAWIDAVRHGAIESRRQVTDQAILLAILG--RQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARA 92 (227)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHHTHHHHHHHHHHH--TCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHH
T ss_pred HHHHhhHHHHHHHhcccccccccccccHHHHHHhhc--CCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 5678888888762 122222 22333322 345899999999999999999998899999999999999998
Q ss_pred CCCceEEecCCccchhhhhhccCC-CCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 74 LPNIRYELTSPAMSIAELEQNVAA-QSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 74 ~~~~~~~~~~~~~~~~d~~~~~~~-~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
..++.+...+. .++...+.. .++||+|++..++|+.++..+++++.++|+ |||.+++..+..
T Consensus 93 ~~~~~~~~~~~----~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~ 155 (227)
T 3e8s_A 93 AGAGEVHLASY----AQLAEAKVPVGKDYDLICANFALLHQDIIELLSAMRTLLV-PGGALVIQTLHP 155 (227)
T ss_dssp TCSSCEEECCH----HHHHTTCSCCCCCEEEEEEESCCCSSCCHHHHHHHHHTEE-EEEEEEEEECCT
T ss_pred hcccccchhhH----HhhcccccccCCCccEEEECchhhhhhHHHHHHHHHHHhC-CCeEEEEEecCc
Confidence 77788887543 333222433 445999999999995599999999999999 999999987764
No 29
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.74 E-value=6.5e-18 Score=139.57 Aligned_cols=117 Identities=13% Similarity=0.053 Sum_probs=95.0
Q ss_pred hCCCCcHHHHHHHHhhC---CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhh
Q 024647 15 TRPNYPEELFKFITSKT---TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAEL 91 (265)
Q Consensus 15 ~rp~y~~~l~~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~ 91 (265)
.++. .+.+.+.+.... +++.+|||||||+|.++..+++.+.+|+|+|+|+.|++.+++. +.+.. +|+
T Consensus 21 ~~~~-~~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~--~~~~~-------~d~ 90 (240)
T 3dli_A 21 FRGS-RELVKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK--FNVVK-------SDA 90 (240)
T ss_dssp HTCC-HHHHHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT--SEEEC-------SCH
T ss_pred hCCC-HHHHHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh--cceee-------ccH
Confidence 3554 455666665443 4668999999999999999999988999999999999999964 77776 455
Q ss_pred hhc--cCCCCceeEEEeccccccC-Ch--hHHHHHHHHHhcCCCcEEEEEecCCCC
Q 024647 92 EQN--VAAQSTVDLVTIAQAMHWF-DL--PQFYNQVKWVLKKPNGVIATWCYTVPE 142 (265)
Q Consensus 92 ~~~--~~~~~~~Dlv~~~~~~~~~-~~--~~~l~~~~~~Lk~pgG~l~~~~~~~~~ 142 (265)
.+. ++++++||+|++..++|++ ++ ..+++++.++|| |||.+++..+....
T Consensus 91 ~~~~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~ 145 (240)
T 3dli_A 91 IEYLKSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMK-YSSYIVIESPNPTS 145 (240)
T ss_dssp HHHHHTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBC-TTCCEEEEEECTTS
T ss_pred HHHhhhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcC-CCcEEEEEeCCcch
Confidence 553 5678899999999999999 44 689999999999 99999997776443
No 30
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.74 E-value=7.1e-18 Score=140.30 Aligned_cols=105 Identities=19% Similarity=0.260 Sum_probs=90.9
Q ss_pred HHhhCC--CCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC---CCceEEecCCccchhhhhhccCCCCc
Q 024647 27 ITSKTT--NHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL---PNIRYELTSPAMSIAELEQNVAAQST 100 (265)
Q Consensus 27 l~~~~~--~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~ 100 (265)
+....+ ++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.+++. .++.+.. +|+..+++++++
T Consensus 36 l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~-------~d~~~~~~~~~~ 108 (253)
T 3g5l_A 36 LKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQ-------KAIEDIAIEPDA 108 (253)
T ss_dssp HHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCCTTEEEEE-------CCGGGCCCCTTC
T ss_pred HHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhccCCeEEEE-------cchhhCCCCCCC
Confidence 444443 678999999999999999999987 899999999999999863 4677777 667778778899
Q ss_pred eeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 101 VDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 101 ~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
||+|++..++|++ ++..+++++.++|+ |||.+++..+.
T Consensus 109 fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 147 (253)
T 3g5l_A 109 YNVVLSSLALHYIASFDDICKKVYINLK-SSGSFIFSVEH 147 (253)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred eEEEEEchhhhhhhhHHHHHHHHHHHcC-CCcEEEEEeCC
Confidence 9999999999999 89999999999999 99999986553
No 31
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.74 E-value=1.8e-18 Score=140.73 Aligned_cols=100 Identities=23% Similarity=0.296 Sum_probs=88.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcC------CCceEEecCCccchhhhhhccCCCCcee
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKL------PNIRYELTSPAMSIAELEQNVAAQSTVD 102 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~d~~~~~~~~~~~D 102 (265)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++. +++.+.. +|+..+++++++||
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-------~d~~~~~~~~~~fD 108 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLK-------SEENKIPLPDNTVD 108 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEE-------CBTTBCSSCSSCEE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-------cccccCCCCCCCee
Confidence 566799999999999999999887 5899999999999988752 4677877 66777777888999
Q ss_pred EEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 103 LVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 103 lv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|++..++|++ ++..+++++.++|+ |||.+++..+.
T Consensus 109 ~v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~ 145 (219)
T 3dh0_A 109 FIFMAFTFHELSEPLKFLEELKRVAK-PFAYLAIIDWK 145 (219)
T ss_dssp EEEEESCGGGCSSHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred EEEeehhhhhcCCHHHHHHHHHHHhC-CCeEEEEEEec
Confidence 99999999998 88999999999999 99999987654
No 32
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.74 E-value=7.1e-18 Score=140.57 Aligned_cols=110 Identities=12% Similarity=-0.037 Sum_probs=87.6
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC-----------------------
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL----------------------- 74 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----------------------- 74 (265)
.+.+.+++.... .++.+|||+|||+|..+..|++.+.+|+|||+|+.|++.|++.
T Consensus 53 ~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (252)
T 2gb4_A 53 HQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSS 132 (252)
T ss_dssp CHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETT
T ss_pred CHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCC
Confidence 445666665432 4668999999999999999999999999999999999998642
Q ss_pred CCceEEecCCccchhhhhhccCCC-CceeEEEeccccccCC---hhHHHHHHHHHhcCCCcEEEEEe
Q 024647 75 PNIRYELTSPAMSIAELEQNVAAQ-STVDLVTIAQAMHWFD---LPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~d~~~~~~~~-~~~Dlv~~~~~~~~~~---~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
.++.+.+ +|+.+++.++ ++||+|++..++|+++ ...+++++.++|| |||++++.+
T Consensus 133 ~~i~~~~-------~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~Lk-pGG~l~l~~ 191 (252)
T 2gb4_A 133 GSISLYC-------CSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLR-KEFQYLVAV 191 (252)
T ss_dssp SSEEEEE-------SCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEE-EEEEEEEEE
T ss_pred CceEEEE-------CccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcC-CCeEEEEEE
Confidence 2455555 6777776543 7999999999998884 3468999999999 999986543
No 33
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.73 E-value=1e-17 Score=141.07 Aligned_cols=100 Identities=19% Similarity=0.240 Sum_probs=87.8
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC------CCceEEecCCccchhhhhhccCCCCceeE
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL------PNIRYELTSPAMSIAELEQNVAAQSTVDL 103 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dl 103 (265)
+++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.+++. +++.+.. +|+..+++++++||+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-------~d~~~~~~~~~~fD~ 108 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQ-------ANIFSLPFEDSSFDH 108 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE-------CCGGGCCSCTTCEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE-------cccccCCCCCCCeeE
Confidence 567899999999999999999985 5799999999999988752 5677777 667777778899999
Q ss_pred EEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 104 VTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 104 v~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
|++..++|++ ++..+++++.++|+ |||.+++..+.
T Consensus 109 v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 144 (276)
T 3mgg_A 109 IFVCFVLEHLQSPEEALKSLKKVLK-PGGTITVIEGD 144 (276)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred EEEechhhhcCCHHHHHHHHHHHcC-CCcEEEEEEcC
Confidence 9999999998 89999999999999 99999986543
No 34
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.73 E-value=1.3e-17 Score=137.52 Aligned_cols=99 Identities=24% Similarity=0.280 Sum_probs=87.0
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC---CCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 33 NHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL---PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
++.+|||+|||+|..+..+++.+. +|+|+|+|+.|++.+++. .++.+.. +|+..+++++++||+|++..
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~-------~d~~~~~~~~~~fD~v~~~~ 115 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYER-------ADLDKLHLPQDSFDLAYSSL 115 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSSSEEEEE-------CCGGGCCCCTTCEEEEEEES
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccCCceEEE-------cChhhccCCCCCceEEEEec
Confidence 568999999999999999999887 899999999999999864 2566766 66677777788999999999
Q ss_pred ccccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 109 AMHWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 109 ~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
++|++ ++..+++++.++|+ |||.+++..+.
T Consensus 116 ~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 146 (243)
T 3bkw_A 116 ALHYVEDVARLFRTVHQALS-PGGHFVFSTEH 146 (243)
T ss_dssp CGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred cccccchHHHHHHHHHHhcC-cCcEEEEEeCC
Confidence 99998 88999999999999 99999986653
No 35
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.73 E-value=1.1e-17 Score=138.16 Aligned_cols=127 Identities=20% Similarity=0.229 Sum_probs=100.7
Q ss_pred HHHHHHHHHhhhCC--CCcHHHHHHHHhh----CCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC---
Q 024647 4 LFIKQAKQYAETRP--NYPEELFKFITSK----TTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL--- 74 (265)
Q Consensus 4 ~f~~~a~~Y~~~rp--~y~~~l~~~l~~~----~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--- 74 (265)
.|+..+..|+.... .......+.+... .+++.+|||+|||+|.++..+++.+.+++|+|+|+.|++.+++.
T Consensus 2 ~y~~~a~~yd~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~ 81 (246)
T 1y8c_A 2 CYNKFAHIYDKLIRADVDYKKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRS 81 (246)
T ss_dssp CHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHccccccHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhh
Confidence 58889999998654 2234444444333 23668999999999999999999988999999999999988752
Q ss_pred --CCceEEecCCccchhhhhhccCCCCceeEEEecc-ccccC----ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 75 --PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ-AMHWF----DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 75 --~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~-~~~~~----~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
.++.+.. +|+.+++.+ ++||+|++.. ++|++ ++..+++++.++|+ |||.+++..+.
T Consensus 82 ~~~~~~~~~-------~d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 144 (246)
T 1y8c_A 82 QGLKPRLAC-------QDISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLK-EGGVFIFDINS 144 (246)
T ss_dssp TTCCCEEEC-------CCGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEE-EEEEEEEEEEC
T ss_pred cCCCeEEEe-------cccccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcC-CCcEEEEEecC
Confidence 1577776 666777655 7899999998 99988 34579999999999 99999986554
No 36
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.73 E-value=1.6e-17 Score=136.98 Aligned_cols=126 Identities=17% Similarity=0.262 Sum_probs=100.4
Q ss_pred HHHHHHHHHhhhCCC-CcHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC-----CCc
Q 024647 4 LFIKQAKQYAETRPN-YPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL-----PNI 77 (265)
Q Consensus 4 ~f~~~a~~Y~~~rp~-y~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~ 77 (265)
.|+..|..|+..... ......+.+....+++.+|||+|||+|.++..+++. .+|+|+|+|+.|++.+++. .++
T Consensus 3 ~y~~~a~~yd~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~ 81 (243)
T 3d2l_A 3 AYEQFAYVYDELMQDVPYPEWVAWVLEQVEPGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETNRHV 81 (243)
T ss_dssp ---CTTHHHHHHTTTCCHHHHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTTCCC
T ss_pred hHHHHHHHHHHhhhcccHHHHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcCCce
Confidence 578889999985442 235677778888887899999999999999999988 8999999999999988752 457
Q ss_pred eEEecCCccchhhhhhccCCCCceeEEEecc-ccccC-C---hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 78 RYELTSPAMSIAELEQNVAAQSTVDLVTIAQ-AMHWF-D---LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 78 ~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~-~~~~~-~---~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
.+.. +|+.+++.+ ++||+|++.. ++|++ + ...+++++.++|+ |||.+++..+.
T Consensus 82 ~~~~-------~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 139 (243)
T 3d2l_A 82 DFWV-------QDMRELELP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLT-DGGKLLFDVHS 139 (243)
T ss_dssp EEEE-------CCGGGCCCS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred EEEE-------cChhhcCCC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcC-CCeEEEEEcCC
Confidence 7777 566666654 7899999987 88887 3 3578999999999 99999985554
No 37
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.73 E-value=1e-17 Score=142.48 Aligned_cols=101 Identities=15% Similarity=0.230 Sum_probs=76.3
Q ss_pred CCCeEEEEcCCcchhHHHH----HhcCCc----EEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhcc--
Q 024647 33 NHELAWDVGTGSGQAAASL----SGIFEN----VIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNV-- 95 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l----~~~~~~----v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~-- 95 (265)
++.+|||||||+|.++..+ +.+++. ++|+|+|+.|++.|++. .++.+.... +++++++
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~-----~~~~~~~~~ 126 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHK-----ETSSEYQSR 126 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEEC-----SCHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEe-----cchhhhhhh
Confidence 4568999999999877644 333343 39999999999988642 244443221 3344332
Q ss_pred ----CCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 96 ----AAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 96 ----~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+++++||+|++..++||+ |+..+++++.++|| |||.+++....
T Consensus 127 ~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lk-pgG~l~i~~~~ 174 (292)
T 2aot_A 127 MLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLG-TNAKMLIIVVS 174 (292)
T ss_dssp HHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEE-EEEEEEEEEEC
T ss_pred hccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcC-CCcEEEEEEec
Confidence 457899999999999999 89999999999999 99999986554
No 38
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.73 E-value=1.2e-17 Score=142.48 Aligned_cols=126 Identities=13% Similarity=0.115 Sum_probs=90.8
Q ss_pred HHHHHH-HHHhhhCC--CCcHHHHHHHHhh-CCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC-----
Q 024647 4 LFIKQA-KQYAETRP--NYPEELFKFITSK-TTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL----- 74 (265)
Q Consensus 4 ~f~~~a-~~Y~~~rp--~y~~~l~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----- 74 (265)
.|+..+ ..|+...+ .+ ......+... ..++.+|||||||+|.++..+++.+.+|+|+|+|+.|++.+++.
T Consensus 50 ~y~~~~~~~y~~~~~~~~~-~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~ 128 (299)
T 3g2m_A 50 FYDEGAADTYRDLIQDADG-TSEAREFATRTGPVSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAP 128 (299)
T ss_dssp CC--------------CCC-HHHHHHHHHHHCCCCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSC
T ss_pred HHhHHHHHHHHHHhcccCc-cHHHHHHHHhhCCCCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcc
Confidence 455554 66777555 33 3444444444 34556999999999999999999999999999999999998752
Q ss_pred ----CCceEEecCCccchhhhhhccCCCCceeEEEec-cccccCCh---hHHHHHHHHHhcCCCcEEEEEecC
Q 024647 75 ----PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIA-QAMHWFDL---PQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 75 ----~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~-~~~~~~~~---~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
.++.+.+ +|+.++++ +++||+|++. ..+|++++ ..+++++.++|+ |||.|++..+.
T Consensus 129 ~~~~~~v~~~~-------~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 192 (299)
T 3g2m_A 129 ADVRDRCTLVQ-------GDMSAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLE-PGGKFLLSLAM 192 (299)
T ss_dssp HHHHTTEEEEE-------CBTTBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred cccccceEEEe-------CchhcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcC-CCcEEEEEeec
Confidence 4577887 66777765 6899999965 57888864 689999999999 99999987765
No 39
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.72 E-value=2.1e-17 Score=134.62 Aligned_cols=125 Identities=18% Similarity=0.205 Sum_probs=100.7
Q ss_pred ChhHHHHHHHHHhhhC----CCCcHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcCCC
Q 024647 1 MAELFIKQAKQYAETR----PNYPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKLPN 76 (265)
Q Consensus 1 ~~~~f~~~a~~Y~~~r----p~y~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~ 76 (265)
|...|...++.|+..- +.|. ..++.+....+ +.+|||+|||+|.++..+++. +|+|+|+.|++.+++. +
T Consensus 13 ~~~~~~~~~~~y~~~~~~~~~~~~-~~~~~l~~~~~-~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~-~ 85 (219)
T 1vlm_A 13 MWHIFERFVNEYERWFLVHRFAYL-SELQAVKCLLP-EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR-G 85 (219)
T ss_dssp TTHHHHHTHHHHHHHHHHTHHHHH-HHHHHHHHHCC-SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT-T
T ss_pred heeecchhHHHHHHHHHhcchhHH-HHHHHHHHhCC-CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc-C
Confidence 4467888888888742 2332 23344544444 789999999999999999876 9999999999999875 6
Q ss_pred ceEEecCCccchhhhhhccCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 77 IRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 77 ~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
+.+.. +|+..+++++++||+|++..++|++ ++..+++++.++|+ |||.+++..+..
T Consensus 86 ~~~~~-------~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~ 142 (219)
T 1vlm_A 86 VFVLK-------GTAENLPLKDESFDFALMVTTICFVDDPERALKEAYRILK-KGGYLIVGIVDR 142 (219)
T ss_dssp CEEEE-------CBTTBCCSCTTCEEEEEEESCGGGSSCHHHHHHHHHHHEE-EEEEEEEEEECS
T ss_pred CEEEE-------cccccCCCCCCCeeEEEEcchHhhccCHHHHHHHHHHHcC-CCcEEEEEEeCC
Confidence 77777 5667777777899999999999998 88999999999999 999999876653
No 40
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.72 E-value=2.1e-17 Score=134.96 Aligned_cols=111 Identities=21% Similarity=0.272 Sum_probs=91.6
Q ss_pred HHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC-----CCceEEecCCccchhhhhhcc
Q 024647 21 EELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL-----PNIRYELTSPAMSIAELEQNV 95 (265)
Q Consensus 21 ~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~d~~~~~ 95 (265)
..+.+.+....+++.+|||+|||+|.++..+++.+++++|+|+|+.+++.+++. .++.+.. +|+.+++
T Consensus 26 ~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-------~d~~~~~ 98 (227)
T 1ve3_A 26 ETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIV-------GDARKLS 98 (227)
T ss_dssp HHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEE-------CCTTSCC
T ss_pred HHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEE-------CchhcCC
Confidence 344555666666788999999999999999999999999999999999988752 5677777 5666666
Q ss_pred CCCCceeEEEeccc--cccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 96 AAQSTVDLVTIAQA--MHWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 96 ~~~~~~Dlv~~~~~--~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+++++||+|+++.+ +++. ++..+++++.++|+ |||.+++..+.
T Consensus 99 ~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~ 144 (227)
T 1ve3_A 99 FEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLK-PSGKFIMYFTD 144 (227)
T ss_dssp SCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred CCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcC-CCcEEEEEecC
Confidence 67789999999998 4444 66789999999999 99999987654
No 41
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.72 E-value=4.1e-17 Score=136.29 Aligned_cols=112 Identities=18% Similarity=0.243 Sum_probs=93.8
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhc-CCcEEEEcCCHHHHHHHHcC----CCceEEecCCccchhhhh
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGI-FENVIGTETSPKQIEFATKL----PNIRYELTSPAMSIAELE 92 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~d~~ 92 (265)
.....+.+.... .++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.+++. +++.+.. +|+.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~-------~d~~ 112 (266)
T 3ujc_A 40 GLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEA-------NDIL 112 (266)
T ss_dssp HHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEE-------CCTT
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEE-------Cccc
Confidence 345556665554 46679999999999999999987 67999999999999999864 4677777 6667
Q ss_pred hccCCCCceeEEEeccccccC---ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 93 QNVAAQSTVDLVTIAQAMHWF---DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 93 ~~~~~~~~~Dlv~~~~~~~~~---~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
++++++++||+|++..++|++ ++..+++++.++|+ |||.+++..+.
T Consensus 113 ~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 161 (266)
T 3ujc_A 113 TKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLK-PTGTLLITDYC 161 (266)
T ss_dssp TCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEE
T ss_pred cCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcC-CCCEEEEEEec
Confidence 777788999999999999998 56789999999999 99999987664
No 42
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.72 E-value=2.3e-17 Score=133.95 Aligned_cols=99 Identities=15% Similarity=0.252 Sum_probs=85.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC----CCceEEecCCccchhhhhhccCCCCceeEEEec
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL----PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~ 107 (265)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++. +++.+.. +|+.+++ ++++||+|++.
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~-------~d~~~~~-~~~~fD~v~~~ 121 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAA-------TDILQFS-TAELFDLIVVA 121 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCSSEEEEE-------CCTTTCC-CSCCEEEEEEE
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCCCeEEEE-------cchhhCC-CCCCccEEEEc
Confidence 3557899999999999999999999999999999999998762 4677777 6667776 67899999999
Q ss_pred cccccC-Ch---hHHHHHHHHHhcCCCcEEEEEecC
Q 024647 108 QAMHWF-DL---PQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 108 ~~~~~~-~~---~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
.++|++ ++ ..+++++.++|+ |||.+++..+.
T Consensus 122 ~~l~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 156 (216)
T 3ofk_A 122 EVLYYLEDMTQMRTAIDNMVKMLA-PGGHLVFGSAR 156 (216)
T ss_dssp SCGGGSSSHHHHHHHHHHHHHTEE-EEEEEEEEEEC
T ss_pred cHHHhCCCHHHHHHHHHHHHHHcC-CCCEEEEEecC
Confidence 999999 56 467999999999 99999986653
No 43
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.71 E-value=5.1e-17 Score=136.38 Aligned_cols=192 Identities=13% Similarity=0.139 Sum_probs=122.6
Q ss_pred HHHHHHHhhC-CCCCeEEEEcCCcchhHHHHHhc--CCcEEEEcCCHHHHHHHHc-CCCceEEecCCccchhhhhhccCC
Q 024647 22 ELFKFITSKT-TNHELAWDVGTGSGQAAASLSGI--FENVIGTETSPKQIEFATK-LPNIRYELTSPAMSIAELEQNVAA 97 (265)
Q Consensus 22 ~l~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~~~~ 97 (265)
.+.+.+.... .++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.+++ .+++.+.. +|++.++++
T Consensus 73 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-------~d~~~~~~~ 145 (269)
T 1p91_A 73 AIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCV-------ASSHRLPFS 145 (269)
T ss_dssp HHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEE-------CCTTSCSBC
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEE-------cchhhCCCC
Confidence 3444444444 46789999999999999999987 4689999999999999876 45677777 566677777
Q ss_pred CCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhhcccccCCCCCCcchhhhhhhhccCCC
Q 024647 98 QSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVFQPFYTVDSDPFWEPQRKLVDNKYMTI 177 (265)
Q Consensus 98 ~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (265)
+++||+|++..+ ..+++++.++|+ |||.+++..+....+ ..+.. ..+. ....+. . ......
T Consensus 146 ~~~fD~v~~~~~------~~~l~~~~~~L~-pgG~l~~~~~~~~~~-~~~~~---~~~~-~~~~~~-~------~~~~~~ 206 (269)
T 1p91_A 146 DTSMDAIIRIYA------PCKAEELARVVK-PGGWVITATPGPRHL-MELKG---LIYN-EVHLHA-P------HAEQLE 206 (269)
T ss_dssp TTCEEEEEEESC------CCCHHHHHHHEE-EEEEEEEEEECTTTT-HHHHT---TTCS-SCCCCC-C------CCCCCT
T ss_pred CCceeEEEEeCC------hhhHHHHHHhcC-CCcEEEEEEcCHHHH-HHHHH---Hhhc-cccccc-c------hhhHhc
Confidence 889999998654 346899999999 999999987765443 22221 1111 111100 0 011111
Q ss_pred CCCCCCCCCCCCCCCCccceeeeccCHHHHHHHHHhhhHHHHHHHhCCccchHHHHHHHHHHhccCCCccEEEEEeeEEE
Q 024647 178 DFPFEPVDGADSTGPFDRFVIEKTMDLEGYFSYIRSWSAYQTAKDKGVELLTENVIENFRRAWNEDGQSRKVVRFPIYLR 257 (265)
Q Consensus 178 ~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 257 (265)
+ |+.++.. .+.....++.+++.+++++.+... .+.++.++.+.+. + ...+++.+.+.
T Consensus 207 g--f~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~----~--~~~~t~~~~i~ 263 (269)
T 1p91_A 207 G--FTLQQSA-------ELCYPMRLRGDEAVALLQMTPFAW--------RAKPEVWQTLAAK----E--VFDCQTDFNIH 263 (269)
T ss_dssp T--EEEEEEE-------EEEEEEEEEHHHHHHHHHTSTTGG--------GCCHHHHHHHHHC----S--EEEEEEEEEEE
T ss_pred C--CcEEEEE-------EEEEEEEcCHHHHHHHhccCCceE--------CCCHHHHHHHhcC----C--CceEEEEEEEE
Confidence 1 3222211 334455556777777777644322 2233344444332 2 36788889999
Q ss_pred EeecC
Q 024647 258 IGKVG 262 (265)
Q Consensus 258 ~ark~ 262 (265)
++||.
T Consensus 264 ~~~k~ 268 (269)
T 1p91_A 264 LWQRS 268 (269)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 88873
No 44
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.71 E-value=1.6e-17 Score=135.11 Aligned_cols=112 Identities=18% Similarity=0.179 Sum_probs=89.4
Q ss_pred CCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC-----------CCceEEec
Q 024647 18 NYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL-----------PNIRYELT 82 (265)
Q Consensus 18 ~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~ 82 (265)
.+.++..+++.... .++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.+++. .++.+..
T Consensus 12 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~- 90 (217)
T 3jwh_A 12 SLNQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQ- 90 (217)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEE-
T ss_pred CHHHHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEe-
Confidence 44556666665554 456899999999999999999987 4899999999999998752 1677777
Q ss_pred CCccchhhhhhccCCCCceeEEEeccccccCC-h--hHHHHHHHHHhcCCCcEEEEEe
Q 024647 83 SPAMSIAELEQNVAAQSTVDLVTIAQAMHWFD-L--PQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 83 ~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~-~--~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
+|+...+.+.++||+|++..++|+++ + ..+++++.++|+ |||.+++..
T Consensus 91 ------~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~ 141 (217)
T 3jwh_A 91 ------GALTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQ-PKIVIVTTP 141 (217)
T ss_dssp ------CCTTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTC-CSEEEEEEE
T ss_pred ------CCcccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcC-CCEEEEEcc
Confidence 55555555667999999999999994 3 589999999999 999776643
No 45
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.71 E-value=6.5e-17 Score=132.50 Aligned_cols=119 Identities=18% Similarity=0.236 Sum_probs=97.1
Q ss_pred HHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC---C--------CceEEecCCccchhh
Q 024647 22 ELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL---P--------NIRYELTSPAMSIAE 90 (265)
Q Consensus 22 ~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~--------~~~~~~~~~~~~~~d 90 (265)
.+...+....+++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++. . ++.+.. +|
T Consensus 19 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~-------~d 91 (235)
T 3sm3_A 19 DLYPIIHNYLQEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKV-------EN 91 (235)
T ss_dssp CCCTTHHHHCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEE-------CC
T ss_pred HHHHHHHHhCCCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEE-------ec
Confidence 33445556667889999999999999999999988999999999999998762 1 346666 66
Q ss_pred hhhccCCCCceeEEEeccccccC-Chh---HHHHHHHHHhcCCCcEEEEEecCCCCCChHHH
Q 024647 91 LEQNVAAQSTVDLVTIAQAMHWF-DLP---QFYNQVKWVLKKPNGVIATWCYTVPEVNVSVD 148 (265)
Q Consensus 91 ~~~~~~~~~~~Dlv~~~~~~~~~-~~~---~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~ 148 (265)
+..+++++++||+|++..++|++ ++. .+++++.++|+ |||.+++..+........+.
T Consensus 92 ~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~ 152 (235)
T 3sm3_A 92 ASSLSFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLK-PGAYLYLVEFGQNWHLKLYR 152 (235)
T ss_dssp TTSCCSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEE-EEEEEEEEEEBCCTTSHHHH
T ss_pred ccccCCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcC-CCeEEEEEECCcchhHHHHH
Confidence 67777778899999999999998 777 89999999999 99999998776544444333
No 46
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.71 E-value=4.5e-17 Score=139.83 Aligned_cols=100 Identities=17% Similarity=0.199 Sum_probs=88.2
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-CCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCCCceeE
Q 024647 32 TNHELAWDVGTGSGQAAASLSGI-FENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQSTVDL 103 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dl 103 (265)
.++.+|||+|||+|.++..++++ +.+|+|+|+|+.|++.|++. .++.+.. +|+.++++++++||+
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~-------~d~~~~~~~~~~fD~ 188 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRV-------CNMLDTPFDKGAVTA 188 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE-------CCTTSCCCCTTCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEE-------CChhcCCCCCCCEeE
Confidence 35689999999999999999988 77999999999999988752 3678887 666777778889999
Q ss_pred EEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 104 VTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 104 v~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
|++..++|++++..+++++.++|| |||.+++.++.
T Consensus 189 V~~~~~l~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 223 (312)
T 3vc1_A 189 SWNNESTMYVDLHDLFSEHSRFLK-VGGRYVTITGC 223 (312)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHEE-EEEEEEEEEEE
T ss_pred EEECCchhhCCHHHHHHHHHHHcC-CCcEEEEEEcc
Confidence 999999999999999999999999 99999986654
No 47
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.71 E-value=5.8e-17 Score=143.09 Aligned_cols=100 Identities=22% Similarity=0.287 Sum_probs=86.3
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcC--------------CCceEEecCCccchhhhhhc
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKL--------------PNIRYELTSPAMSIAELEQN 94 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~--------------~~~~~~~~~~~~~~~d~~~~ 94 (265)
.++.+|||+|||+|..+..+++.. .+|+|+|+|+.|++.+++. +++.+.. +|++++
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~-------~d~~~l 154 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLK-------GFIENL 154 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEE-------SCTTCG
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEE-------ccHHHh
Confidence 356899999999999999998864 3899999999999998863 5788888 445554
Q ss_pred ------cCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 95 ------VAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 95 ------~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
++++++||+|+++.++|++ |+..+++++.++|| |||.|++..+.
T Consensus 155 ~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lk-pgG~l~i~~~~ 205 (383)
T 4fsd_A 155 ATAEPEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLR-DGGELYFSDVY 205 (383)
T ss_dssp GGCBSCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEE
T ss_pred hhcccCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcC-CCCEEEEEEec
Confidence 7788899999999999998 99999999999999 99999986553
No 48
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.70 E-value=3.3e-17 Score=134.77 Aligned_cols=127 Identities=18% Similarity=0.275 Sum_probs=98.6
Q ss_pred HHH-HHHHHHhhhC----CCCcH---HHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc-C
Q 024647 4 LFI-KQAKQYAETR----PNYPE---ELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK-L 74 (265)
Q Consensus 4 ~f~-~~a~~Y~~~r----p~y~~---~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~ 74 (265)
.|+ ..+..|+..- +.|.. .+.+.+....+++.+|||+|||+|..+..+++.+.+|+|+|+|+.|++.+++ .
T Consensus 3 ~y~~~~a~~yd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~ 82 (239)
T 3bxo_A 3 MYEVDHADVYDLFYLGRGKDYAAEASDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL 82 (239)
T ss_dssp -CCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC
T ss_pred cccchhHHHHHHHhhccHhhHHHHHHHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC
Confidence 455 6677777742 44432 3445555555677899999999999999999998899999999999999886 4
Q ss_pred CCceEEecCCccchhhhhhccCCCCceeEEEecc-ccccC-C---hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 75 PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ-AMHWF-D---LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~-~~~~~-~---~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+++.+.. +|+.+++. +++||+|+|.. ++|++ + ...+++++.++|+ |||.+++..+.
T Consensus 83 ~~~~~~~-------~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 143 (239)
T 3bxo_A 83 PDATLHQ-------GDMRDFRL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLE-PGGVVVVEPWW 143 (239)
T ss_dssp TTCEEEE-------CCTTTCCC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEE-EEEEEEECCCC
T ss_pred CCCEEEE-------CCHHHccc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcC-CCeEEEEEecc
Confidence 6788877 56666655 67899999655 88887 4 3579999999999 99999986544
No 49
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.70 E-value=5.6e-17 Score=137.76 Aligned_cols=112 Identities=17% Similarity=0.138 Sum_probs=91.2
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC----------CCceEEecCCccc
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL----------PNIRYELTSPAMS 87 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~ 87 (265)
.....+++.... .++.+|||+|||+|..+..+++.+.+|+|+|+|+.|++.+++. .++.+..
T Consensus 42 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~------ 115 (293)
T 3thr_A 42 TAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEE------ 115 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEE------
T ss_pred HHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEee------
Confidence 355556665543 4568999999999999999999999999999999999988641 3566666
Q ss_pred hhhhhhcc---CCCCceeEEEec-cccccC-C-------hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 88 IAELEQNV---AAQSTVDLVTIA-QAMHWF-D-------LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 88 ~~d~~~~~---~~~~~~Dlv~~~-~~~~~~-~-------~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|+..++ +++++||+|++. .++|++ + +..+++++.++|| |||.+++..++
T Consensus 116 -~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 177 (293)
T 3thr_A 116 -ANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVR-PGGLLVIDHRN 177 (293)
T ss_dssp -CCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEE-EEEEEEEEEEC
T ss_pred -cChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcC-CCeEEEEEeCC
Confidence 4455554 677899999998 789888 7 7899999999999 99999987654
No 50
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.70 E-value=4.2e-17 Score=127.39 Aligned_cols=105 Identities=16% Similarity=0.204 Sum_probs=89.5
Q ss_pred HHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc-CCCceEEecCCccchhhhhhccCCCCc
Q 024647 22 ELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK-LPNIRYELTSPAMSIAELEQNVAAQST 100 (265)
Q Consensus 22 ~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~ 100 (265)
++++.+. ..++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++ .+++.+.. +| .++++++
T Consensus 8 ~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~v~~~~-------~d---~~~~~~~ 75 (170)
T 3i9f_A 8 EYLPNIF--EGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKFDSVITLS-------DP---KEIPDNS 75 (170)
T ss_dssp TTHHHHH--SSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHCTTSEEES-------SG---GGSCTTC
T ss_pred HHHHhcC--cCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHhCCCcEEEe-------CC---CCCCCCc
Confidence 4444442 3566789999999999999999988899999999999999876 46777776 55 5567889
Q ss_pred eeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 101 VDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 101 ~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
||+|+++.++|++ ++..+++++.++|+ |||.+++..+.
T Consensus 76 ~D~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 114 (170)
T 3i9f_A 76 VDFILFANSFHDMDDKQHVISEVKRILK-DDGRVIIIDWR 114 (170)
T ss_dssp EEEEEEESCSTTCSCHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred eEEEEEccchhcccCHHHHHHHHHHhcC-CCCEEEEEEcC
Confidence 9999999999999 89999999999999 99999987664
No 51
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.70 E-value=6.9e-17 Score=134.17 Aligned_cols=99 Identities=23% Similarity=0.294 Sum_probs=84.9
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC-CcEEEEcCCHHHHHHHHcC----CCceEEecCCccchhhhhhccCCCCceeEEEe
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF-ENVIGTETSPKQIEFATKL----PNIRYELTSPAMSIAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~ 106 (265)
.++.+|||+|||+|.++..+++.+ .+|+++|+|+.|++.+++. .++.+.. +|+..+++++++||+|++
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~-------~d~~~~~~~~~~fD~v~~ 164 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFIL-------ASMETATLPPNTYDLIVI 164 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEE-------SCGGGCCCCSSCEEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEE-------ccHHHCCCCCCCeEEEEE
Confidence 356899999999999999999875 4699999999999998863 3567766 667777777889999999
Q ss_pred ccccccCC---hhHHHHHHHHHhcCCCcEEEEEec
Q 024647 107 AQAMHWFD---LPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 107 ~~~~~~~~---~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
..++|+++ +..+++++.++|+ |||.+++..+
T Consensus 165 ~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~ 198 (254)
T 1xtp_A 165 QWTAIYLTDADFVKFFKHCQQALT-PNGYIFFKEN 198 (254)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred cchhhhCCHHHHHHHHHHHHHhcC-CCeEEEEEec
Confidence 99999983 5689999999999 9999998664
No 52
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.69 E-value=6.3e-17 Score=133.71 Aligned_cols=99 Identities=20% Similarity=0.221 Sum_probs=83.3
Q ss_pred CCCeEEEEcCCcchhHHHHHhcC-CcEEEEcCCHHHHHHHHcC------CCceEEecCCccchhhhhhccCCCCceeEEE
Q 024647 33 NHELAWDVGTGSGQAAASLSGIF-ENVIGTETSPKQIEFATKL------PNIRYELTSPAMSIAELEQNVAAQSTVDLVT 105 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~ 105 (265)
++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.+++. .++.+.. +|+..++.++++||+|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-------~d~~~~~~~~~~fD~v~ 151 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFC-------CGLQDFTPEPDSYDVIW 151 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEE-------CCGGGCCCCSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEE-------cChhhcCCCCCCEEEEE
Confidence 47899999999999999998875 4899999999999998753 1355666 66777777777999999
Q ss_pred eccccccC-Chh--HHHHHHHHHhcCCCcEEEEEecC
Q 024647 106 IAQAMHWF-DLP--QFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 106 ~~~~~~~~-~~~--~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+..++|++ ++. .+++++.++|+ |||.+++.++.
T Consensus 152 ~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~ 187 (241)
T 2ex4_A 152 IQWVIGHLTDQHLAEFLRRCKGSLR-PNGIIVIKDNM 187 (241)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEE
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcC-CCeEEEEEEcc
Confidence 99999998 433 79999999999 99999986654
No 53
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.69 E-value=1.1e-16 Score=135.51 Aligned_cols=112 Identities=13% Similarity=0.188 Sum_probs=93.3
Q ss_pred CcHHHHHHHHhhC---CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcC-----CCceEEecCCccc
Q 024647 19 YPEELFKFITSKT---TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKL-----PNIRYELTSPAMS 87 (265)
Q Consensus 19 y~~~l~~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~ 87 (265)
|.+..++.+.... .++.+|||+|||+|..+..+++.+ .+|+|+|+|+.|++.+++. .++.+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~------ 78 (284)
T 3gu3_A 5 YNDDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLE------ 78 (284)
T ss_dssp CCHHHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEE------
T ss_pred cchHHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEE------
Confidence 4566677766553 467899999999999999999874 5799999999999988752 2677777
Q ss_pred hhhhhhccCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 88 IAELEQNVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 88 ~~d~~~~~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|+.+++. +++||+|++..++|++ ++..+++++.++|+ |||.+++..+.
T Consensus 79 -~d~~~~~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 128 (284)
T 3gu3_A 79 -GDATEIEL-NDKYDIAICHAFLLHMTTPETMLQKMIHSVK-KGGKIICFEPH 128 (284)
T ss_dssp -SCTTTCCC-SSCEEEEEEESCGGGCSSHHHHHHHHHHTEE-EEEEEEEEECC
T ss_pred -cchhhcCc-CCCeeEEEECChhhcCCCHHHHHHHHHHHcC-CCCEEEEEecc
Confidence 66677765 4699999999999998 89999999999999 99999987654
No 54
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.69 E-value=3.3e-17 Score=139.15 Aligned_cols=101 Identities=14% Similarity=0.142 Sum_probs=84.6
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccC-CCCce
Q 024647 31 TTNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVA-AQSTV 101 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~-~~~~~ 101 (265)
.+++.+|||+|||+|..+..+++.+. +|+|+|+|+.|++.+++. .++.+.. +|+...++ ++++|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~-------~d~~~~~~~~~~~f 134 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRA-------QDSYGRHMDLGKEF 134 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEE-------SCTTTSCCCCSSCE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEE-------CCccccccCCCCCc
Confidence 46778999999999999999988765 899999999999988752 2467777 56666665 57899
Q ss_pred eEEEecccccc----C-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 102 DLVTIAQAMHW----F-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 102 Dlv~~~~~~~~----~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
|+|++..++|+ . ++..+++++.++|+ |||.+++..+.
T Consensus 135 D~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 176 (298)
T 1ri5_A 135 DVISSQFSFHYAFSTSESLDIAQRNIARHLR-PGGYFIMTVPS 176 (298)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEE-EEEEEEEEEEC
T ss_pred CEEEECchhhhhcCCHHHHHHHHHHHHHhcC-CCCEEEEEECC
Confidence 99999999988 2 45689999999999 99999987765
No 55
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.69 E-value=1.3e-16 Score=126.46 Aligned_cols=106 Identities=14% Similarity=0.153 Sum_probs=80.3
Q ss_pred HHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC------CCceEEecCCccchhhhhhcc-CCC
Q 024647 26 FITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL------PNIRYELTSPAMSIAELEQNV-AAQ 98 (265)
Q Consensus 26 ~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~d~~~~~-~~~ 98 (265)
++....+++.+|||+|||+|..+..+++.+.+|+|+|+|+.|++.|++. .++.+... +.+.++ ..+
T Consensus 15 ~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~-------~~~~l~~~~~ 87 (185)
T 3mti_A 15 FLAEVLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILD-------GHENLDHYVR 87 (185)
T ss_dssp HHHTTCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEES-------CGGGGGGTCC
T ss_pred HHHHhCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-------cHHHHHhhcc
Confidence 3444456788999999999999999999988999999999999998752 56788773 334432 346
Q ss_pred CceeEEEecc-cccc-------C--ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 99 STVDLVTIAQ-AMHW-------F--DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 99 ~~~Dlv~~~~-~~~~-------~--~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
++||+|+++. .++. . +...+++++.++|| |||.+++..+.
T Consensus 88 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~ 137 (185)
T 3mti_A 88 EPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLE-VGGRLAIMIYY 137 (185)
T ss_dssp SCEEEEEEEEC-----------CHHHHHHHHHHHHHHEE-EEEEEEEEEC-
T ss_pred CCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcC-CCcEEEEEEeC
Confidence 7899999874 3332 1 23468899999999 99999987664
No 56
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.69 E-value=6.4e-17 Score=130.75 Aligned_cols=114 Identities=16% Similarity=0.179 Sum_probs=94.4
Q ss_pred cHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC----CCceEEecCCccchhhhhhc
Q 024647 20 PEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL----PNIRYELTSPAMSIAELEQN 94 (265)
Q Consensus 20 ~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~d~~~~ 94 (265)
...+.+.+....+++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++. +++.+.. +|+..+
T Consensus 29 ~~~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~-------~d~~~~ 101 (215)
T 2pxx_A 29 FSSFRALLEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWET-------MDVRKL 101 (215)
T ss_dssp HHHHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEE-------CCTTSC
T ss_pred HHHHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEE-------cchhcC
Confidence 3467777777777888999999999999999999876 899999999999998763 4677777 566666
Q ss_pred cCCCCceeEEEeccccccC----------------ChhHHHHHHHHHhcCCCcEEEEEecCCC
Q 024647 95 VAAQSTVDLVTIAQAMHWF----------------DLPQFYNQVKWVLKKPNGVIATWCYTVP 141 (265)
Q Consensus 95 ~~~~~~~Dlv~~~~~~~~~----------------~~~~~l~~~~~~Lk~pgG~l~~~~~~~~ 141 (265)
++++++||+|++..+++.+ +...+++++.++|+ |||.+++..+..+
T Consensus 102 ~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~~~~ 163 (215)
T 2pxx_A 102 DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLV-PGGRFISMTSAAP 163 (215)
T ss_dssp CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEE-EEEEEEEEESCCH
T ss_pred CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCc-CCCEEEEEeCCCc
Confidence 7778899999998877543 34689999999999 9999999887643
No 57
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.68 E-value=2.1e-16 Score=130.02 Aligned_cols=111 Identities=15% Similarity=0.197 Sum_probs=90.3
Q ss_pred cHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhh
Q 024647 20 PEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELE 92 (265)
Q Consensus 20 ~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~ 92 (265)
.+.+.+++.....++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++. .++.+.. +|+.
T Consensus 53 ~~~l~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~-------~d~~ 125 (235)
T 3lcc_A 53 TPLIVHLVDTSSLPLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVK-------EDVF 125 (235)
T ss_dssp CHHHHHHHHTTCSCCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEEC-------CCTT
T ss_pred CHHHHHHHHhcCCCCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEE-------Cchh
Confidence 3556666655444556999999999999999999888999999999999998752 2367777 5666
Q ss_pred hccCCCCceeEEEeccccccCC---hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 93 QNVAAQSTVDLVTIAQAMHWFD---LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 93 ~~~~~~~~~Dlv~~~~~~~~~~---~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+++ ++++||+|++..++|+++ ...+++++.++|+ |||.+++..+.
T Consensus 126 ~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 173 (235)
T 3lcc_A 126 TWR-PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLK-PDGELITLMYP 173 (235)
T ss_dssp TCC-CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEE-EEEEEEEEECC
T ss_pred cCC-CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCC-CCcEEEEEEec
Confidence 665 556999999999999884 5679999999999 99999986664
No 58
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.68 E-value=9.3e-17 Score=130.66 Aligned_cols=108 Identities=19% Similarity=0.180 Sum_probs=86.4
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC-----------CCceEEecCCc
Q 024647 21 EELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL-----------PNIRYELTSPA 85 (265)
Q Consensus 21 ~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~~ 85 (265)
+...+++.... .++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.+++. .++.+..
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~---- 90 (219)
T 3jwg_A 15 QQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQ---- 90 (219)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEE----
T ss_pred HHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEe----
Confidence 44445554443 456899999999999999999987 4899999999999998752 1678887
Q ss_pred cchhhhhhccCCCCceeEEEeccccccCCh---hHHHHHHHHHhcCCCcEEEEE
Q 024647 86 MSIAELEQNVAAQSTVDLVTIAQAMHWFDL---PQFYNQVKWVLKKPNGVIATW 136 (265)
Q Consensus 86 ~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~~---~~~l~~~~~~Lk~pgG~l~~~ 136 (265)
+|+...+.++++||+|++..++|+++. ..+++++.++|+ |||.++..
T Consensus 91 ---~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~~i~~ 140 (219)
T 3jwg_A 91 ---SSLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTR-PQTVIVST 140 (219)
T ss_dssp ---CCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTC-CSEEEEEE
T ss_pred ---CcccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhC-CCEEEEEc
Confidence 555556556689999999999999943 489999999999 99966553
No 59
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.68 E-value=1.9e-16 Score=135.21 Aligned_cols=106 Identities=21% Similarity=0.236 Sum_probs=86.8
Q ss_pred HHHHhhC--CCCCeEEEEcCCcchhHHHHHhc-CCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhc
Q 024647 25 KFITSKT--TNHELAWDVGTGSGQAAASLSGI-FENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQN 94 (265)
Q Consensus 25 ~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~ 94 (265)
+.+.... .++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.+++. .++.+.. +|+.++
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~-------~d~~~~ 134 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI-------QGWEEF 134 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEE-------CCGGGC
T ss_pred HHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE-------CCHHHc
Confidence 3444443 46679999999999999999988 67899999999999988752 2577777 555554
Q ss_pred cCCCCceeEEEeccccccC-Ch---------hHHHHHHHHHhcCCCcEEEEEecCCC
Q 024647 95 VAAQSTVDLVTIAQAMHWF-DL---------PQFYNQVKWVLKKPNGVIATWCYTVP 141 (265)
Q Consensus 95 ~~~~~~~Dlv~~~~~~~~~-~~---------~~~l~~~~~~Lk~pgG~l~~~~~~~~ 141 (265)
+++||+|++..++|++ |+ ..+++++.++|| |||.+++..+..+
T Consensus 135 ---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~ 187 (302)
T 3hem_A 135 ---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTP-DDGRMLLHTITIP 187 (302)
T ss_dssp ---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSC-TTCEEEEEEEECC
T ss_pred ---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcC-CCcEEEEEEEecc
Confidence 6799999999999988 65 589999999999 9999998766533
No 60
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.68 E-value=8.5e-17 Score=134.22 Aligned_cols=127 Identities=9% Similarity=-0.072 Sum_probs=88.2
Q ss_pred hHHHHHHHHHhhhCCCCc-HHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceE
Q 024647 3 ELFIKQAKQYAETRPNYP-EELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKLPNIRY 79 (265)
Q Consensus 3 ~~f~~~a~~Y~~~rp~y~-~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 79 (265)
+.|+..+..|.+....-. +...+.+.... .++.+|||||||+|.++..+++++.+|+|+|+|+.|++.|++......
T Consensus 12 ~~wd~~a~~f~~~~~~~~~~~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~ 91 (261)
T 3iv6_A 12 EAWELIGNQFWTIGRVAARPSDRENDIFLENIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRC 91 (261)
T ss_dssp HHHHTTTTHHHHTSCGGGSCCHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSC
T ss_pred hHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcc
Confidence 456666666655332110 23334444433 467899999999999999999999999999999999999986321111
Q ss_pred EecCCccchhhhhhccC-----CCCceeEEEeccccccCC---hhHHHHHHHHHhcCCCcEEEEEec
Q 024647 80 ELTSPAMSIAELEQNVA-----AQSTVDLVTIAQAMHWFD---LPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 80 ~~~~~~~~~~d~~~~~~-----~~~~~Dlv~~~~~~~~~~---~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.. .++.++.. .+++||+|+++.++|++. ...++.++.++| |||.+++...
T Consensus 92 v~-------~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL--PGG~l~lS~~ 149 (261)
T 3iv6_A 92 VT-------IDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV--GSGTVRASVK 149 (261)
T ss_dssp CE-------EEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH--TTSEEEEEEE
T ss_pred ce-------eeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC--cCcEEEEEec
Confidence 22 22222221 246899999999999873 346899999998 5999998654
No 61
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.67 E-value=1.4e-16 Score=130.02 Aligned_cols=123 Identities=22% Similarity=0.224 Sum_probs=90.6
Q ss_pred HHHhhhCCCCcHHHHHHHHhhC-CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccch
Q 024647 10 KQYAETRPNYPEELFKFITSKT-TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSI 88 (265)
Q Consensus 10 ~~Y~~~rp~y~~~l~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 88 (265)
..|++....|...+...+.... .++.+|||+|||+|..+..+++.+.+++|+|+|+.+++.+++.. ..+..
T Consensus 8 ~~y~~~~~~~~~~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~------- 79 (230)
T 3cc8_A 8 SLYEEKSGHYYNAVNPNLLKHIKKEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL-DHVVL------- 79 (230)
T ss_dssp ------------CCCHHHHTTCCTTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS-SEEEE-------
T ss_pred hhhhccchhHHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC-CcEEE-------
Confidence 3454444444444444555544 46789999999999999999988778999999999999998642 35666
Q ss_pred hhhhh--ccCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecCCC
Q 024647 89 AELEQ--NVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYTVP 141 (265)
Q Consensus 89 ~d~~~--~~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~~~ 141 (265)
+|+.+ .++++++||+|++..++|++ ++..+++++.++|+ |||.+++..+...
T Consensus 80 ~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 80 GDIETMDMPYEEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIK-QNGVILASIPNVS 134 (230)
T ss_dssp SCTTTCCCCSCTTCEEEEEEESCGGGSSCHHHHHHHTGGGEE-EEEEEEEEEECTT
T ss_pred cchhhcCCCCCCCccCEEEECChhhhcCCHHHHHHHHHHHcC-CCCEEEEEeCCcc
Confidence 44444 45567899999999999988 88999999999999 9999998776543
No 62
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.67 E-value=5.3e-16 Score=123.90 Aligned_cols=108 Identities=14% Similarity=0.240 Sum_probs=88.1
Q ss_pred HHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC------CCceEEecCCccchhhhhhc
Q 024647 21 EELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL------PNIRYELTSPAMSIAELEQN 94 (265)
Q Consensus 21 ~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~d~~~~ 94 (265)
+.+.+.+. . .++.+|||+|||+|..+..+++.+.+|+|+|+|+.+++.+++. +++.+.. +|+.++
T Consensus 22 ~~l~~~~~-~-~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-------~d~~~~ 92 (199)
T 2xvm_A 22 SEVLEAVK-V-VKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRV-------VDLNNL 92 (199)
T ss_dssp HHHHHHTT-T-SCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEE-------CCGGGC
T ss_pred HHHHHHhh-c-cCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEE-------cchhhC
Confidence 45555442 2 3557999999999999999999988999999999999988752 3677777 666777
Q ss_pred cCCCCceeEEEeccccccCC---hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 95 VAAQSTVDLVTIAQAMHWFD---LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 95 ~~~~~~~Dlv~~~~~~~~~~---~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+. +++||+|++..++|+++ ...+++++.++|+ |||.+++....
T Consensus 93 ~~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~ 138 (199)
T 2xvm_A 93 TF-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTK-PGGYNLIVAAM 138 (199)
T ss_dssp CC-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEE-EEEEEEEEEEB
T ss_pred CC-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcC-CCeEEEEEEee
Confidence 66 78999999999999984 5689999999999 99998875543
No 63
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.67 E-value=1.8e-16 Score=129.24 Aligned_cols=108 Identities=16% Similarity=0.200 Sum_probs=84.5
Q ss_pred HHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHc------CCCceEEecCCccchhhhhhc-
Q 024647 24 FKFITSKTTNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATK------LPNIRYELTSPAMSIAELEQN- 94 (265)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~d~~~~- 94 (265)
+++......+..+|||||||+|.++..+++.++ +|+|||+|+.|++.|++ ..|+.+.. +|+.++
T Consensus 25 ~d~~~~f~~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~-------~Da~~~l 97 (218)
T 3dxy_A 25 LDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMC-------HDAVEVL 97 (218)
T ss_dssp CCHHHHHSSCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEEC-------SCHHHHH
T ss_pred CCHHHHcCCCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEE-------CCHHHHH
Confidence 333333344668899999999999999999875 59999999999998764 35788887 444442
Q ss_pred c--CCCCceeEEEeccccccCCh---------hHHHHHHHHHhcCCCcEEEEEecC
Q 024647 95 V--AAQSTVDLVTIAQAMHWFDL---------PQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 95 ~--~~~~~~Dlv~~~~~~~~~~~---------~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+ ++++++|.|++++...|... ..+++++.++|| |||.|++.+..
T Consensus 98 ~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~Lk-pGG~l~i~td~ 152 (218)
T 3dxy_A 98 HKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQ-LGGVFHMATDW 152 (218)
T ss_dssp HHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEE-EEEEEEEEESC
T ss_pred HHHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcC-CCcEEEEEeCC
Confidence 2 57889999999987777632 149999999999 99999987654
No 64
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.67 E-value=4.1e-17 Score=134.53 Aligned_cols=111 Identities=13% Similarity=0.077 Sum_probs=85.0
Q ss_pred cHHHHHHHHhhC-CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC-----CCceEEecCCccchhhhh
Q 024647 20 PEELFKFITSKT-TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL-----PNIRYELTSPAMSIAELE 92 (265)
Q Consensus 20 ~~~l~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~d~~ 92 (265)
...+++.+.... .++.+|||||||+|.++..+++... +|+|+|+|+.|++.|++. .++.+.. +|++
T Consensus 46 ~~~~~~~l~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~-------~d~~ 118 (236)
T 1zx0_A 46 ETPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLK-------GLWE 118 (236)
T ss_dssp GHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEE-------SCHH
T ss_pred HHHHHHHHHhhcCCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEe-------cCHH
Confidence 345555555443 4667999999999999999988655 899999999999998752 3466666 6667
Q ss_pred hc--cCCCCceeEEEe-ccccc--cC---ChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 93 QN--VAAQSTVDLVTI-AQAMH--WF---DLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 93 ~~--~~~~~~~Dlv~~-~~~~~--~~---~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
++ ++++++||+|++ .+.++ .. +...+++++.++|| |||.|++..+
T Consensus 119 ~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~Lk-pgG~l~~~~~ 171 (236)
T 1zx0_A 119 DVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLK-PGGVLTYCNL 171 (236)
T ss_dssp HHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEE-EEEEEEECCH
T ss_pred HhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcC-CCeEEEEEec
Confidence 76 778899999999 55432 22 23467999999999 9999998654
No 65
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.67 E-value=4e-16 Score=127.76 Aligned_cols=102 Identities=17% Similarity=0.142 Sum_probs=85.6
Q ss_pred cHHHHHHHHh-hCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc-CCCceEEecCCccchhhh-hhccC
Q 024647 20 PEELFKFITS-KTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK-LPNIRYELTSPAMSIAEL-EQNVA 96 (265)
Q Consensus 20 ~~~l~~~l~~-~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~-~~~~~ 96 (265)
...+++.+.. ..+++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++ .+++.+.. +|+ +.+++
T Consensus 34 ~~~l~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-------~d~~~~~~~ 106 (226)
T 3m33_A 34 PELTFDLWLSRLLTPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANAPHADVYE-------WNGKGELPA 106 (226)
T ss_dssp TTHHHHHHHHHHCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHCTTSEEEE-------CCSCSSCCT
T ss_pred HHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhCCCceEEE-------cchhhccCC
Confidence 3455555544 45677899999999999999999998899999999999999876 46788888 455 45666
Q ss_pred C-CCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEE
Q 024647 97 A-QSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIA 134 (265)
Q Consensus 97 ~-~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~ 134 (265)
+ +++||+|+++ .++..+++++.++|| |||.++
T Consensus 107 ~~~~~fD~v~~~-----~~~~~~l~~~~~~Lk-pgG~l~ 139 (226)
T 3m33_A 107 GLGAPFGLIVSR-----RGPTSVILRLPELAA-PDAHFL 139 (226)
T ss_dssp TCCCCEEEEEEE-----SCCSGGGGGHHHHEE-EEEEEE
T ss_pred cCCCCEEEEEeC-----CCHHHHHHHHHHHcC-CCcEEE
Confidence 6 7899999987 578899999999999 999998
No 66
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.67 E-value=4.1e-17 Score=138.90 Aligned_cols=102 Identities=16% Similarity=0.283 Sum_probs=80.2
Q ss_pred CCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC------------------------------------
Q 024647 33 NHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL------------------------------------ 74 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~------------------------------------ 74 (265)
++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.|++.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 56899999999999999999984 5899999999999999863
Q ss_pred ----------------------------CCceEEecCCccchhhhhhccCCCCceeEEEeccccccC-------ChhHHH
Q 024647 75 ----------------------------PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWF-------DLPQFY 119 (265)
Q Consensus 75 ----------------------------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~-------~~~~~l 119 (265)
.++.+...+...... +..+...++||+|+|..+++|+ +...++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~--~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRD--DLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSH--HHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCcc--ccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHH
Confidence 256666644311100 1112467899999999999887 567899
Q ss_pred HHHHHHhcCCCcEEEEEe
Q 024647 120 NQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 120 ~~~~~~Lk~pgG~l~~~~ 137 (265)
+++.++|+ |||.|++..
T Consensus 204 ~~~~~~Lk-pGG~lil~~ 220 (292)
T 3g07_A 204 RRIYRHLR-PGGILVLEP 220 (292)
T ss_dssp HHHHHHEE-EEEEEEEEC
T ss_pred HHHHHHhC-CCcEEEEec
Confidence 99999999 999999853
No 67
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.66 E-value=2.4e-16 Score=130.35 Aligned_cols=110 Identities=19% Similarity=0.170 Sum_probs=87.1
Q ss_pred HHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC---CCceEEecCCccchhhhhhccCC--
Q 024647 23 LFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL---PNIRYELTSPAMSIAELEQNVAA-- 97 (265)
Q Consensus 23 l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~~~~~~~~~~~~~~~d~~~~~~~-- 97 (265)
.+..+.....++.+|||+|||+|..+..+++.+.+|+|+|+|+.|++.+++. .++.+.+.++ .+++..
T Consensus 46 ~~~~~~~~~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~-------~~~~~~~~ 118 (245)
T 3ggd_A 46 DLPRFELLFNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTAANISYRLLDG-------LVPEQAAQ 118 (245)
T ss_dssp HHHHHTTTSCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCCTTEEEEECCT-------TCHHHHHH
T ss_pred HHHHHhhccCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcccCceEEECcc-------cccccccc
Confidence 3444444456778999999999999999999999999999999999998752 3678887544 332211
Q ss_pred ---CCceeEEEeccccccCC---hhHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 98 ---QSTVDLVTIAQAMHWFD---LPQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 98 ---~~~~Dlv~~~~~~~~~~---~~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
..+||+|++..++|+++ ...+++++.++|| |||.+++..+..
T Consensus 119 ~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~ 166 (245)
T 3ggd_A 119 IHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLG-KQGAMYLIELGT 166 (245)
T ss_dssp HHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHT-TTCEEEEEEECT
T ss_pred cccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcC-CCCEEEEEeCCc
Confidence 12499999999999985 4589999999999 999988877653
No 68
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.66 E-value=2.6e-16 Score=126.85 Aligned_cols=109 Identities=17% Similarity=0.229 Sum_probs=86.8
Q ss_pred HHHHHHhhCCCCCeEEEEcCCcchhHH-HHHhcCCcEEEEcCCHHHHHHHHcC-----CCceEEecCCccchhhhhhccC
Q 024647 23 LFKFITSKTTNHELAWDVGTGSGQAAA-SLSGIFENVIGTETSPKQIEFATKL-----PNIRYELTSPAMSIAELEQNVA 96 (265)
Q Consensus 23 l~~~l~~~~~~~~~vlDvGcG~G~~~~-~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~d~~~~~~ 96 (265)
+++.+. ..+++.+|||+|||+|..+. .+++.+.+|+|+|+|+.|++.+++. .++.+.. +|+.++++
T Consensus 14 ~~~~~~-~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-------~d~~~~~~ 85 (209)
T 2p8j_A 14 FLKYCN-ESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISK-------GDIRKLPF 85 (209)
T ss_dssp HHHHHH-HSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEE-------CCTTSCCS
T ss_pred HHHHHh-ccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEE-------CchhhCCC
Confidence 343333 34567899999999999854 5556677999999999999988752 4677777 56677777
Q ss_pred CCCceeEEEeccccccC---ChhHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 97 AQSTVDLVTIAQAMHWF---DLPQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 97 ~~~~~Dlv~~~~~~~~~---~~~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
++++||+|++..++|++ ++..+++++.++|+ |||.+++..+..
T Consensus 86 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~ 131 (209)
T 2p8j_A 86 KDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLK-PGGLACINFLTT 131 (209)
T ss_dssp CTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEET
T ss_pred CCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcC-CCcEEEEEEecc
Confidence 78899999999988887 45689999999999 999999876653
No 69
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.66 E-value=6.7e-16 Score=122.84 Aligned_cols=116 Identities=16% Similarity=0.095 Sum_probs=88.5
Q ss_pred hCCCCcHHHHHHHHhhC-----CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC------CCceEEec
Q 024647 15 TRPNYPEELFKFITSKT-----TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL------PNIRYELT 82 (265)
Q Consensus 15 ~rp~y~~~l~~~l~~~~-----~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~~~~~~~~ 82 (265)
.||. ++.+.+.+.... .++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.+++. .++.+.+
T Consensus 22 ~rp~-~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~- 99 (189)
T 3p9n_A 22 TRPT-TDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRR- 99 (189)
T ss_dssp C----CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEE-
T ss_pred CccC-cHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEE-
Confidence 4665 455555544332 4668999999999999998887765 699999999999998752 4677887
Q ss_pred CCccchhhhhhcc--CCCCceeEEEeccccccC--ChhHHHHHHHH--HhcCCCcEEEEEecC
Q 024647 83 SPAMSIAELEQNV--AAQSTVDLVTIAQAMHWF--DLPQFYNQVKW--VLKKPNGVIATWCYT 139 (265)
Q Consensus 83 ~~~~~~~d~~~~~--~~~~~~Dlv~~~~~~~~~--~~~~~l~~~~~--~Lk~pgG~l~~~~~~ 139 (265)
+|+.++. .++++||+|+++..+|+. +...++.++.+ +|+ |||.+++....
T Consensus 100 ------~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~-pgG~l~~~~~~ 155 (189)
T 3p9n_A 100 ------GAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTR-EGTVAVVERAT 155 (189)
T ss_dssp ------SCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCC-TTCEEEEEEET
T ss_pred ------ccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccC-CCeEEEEEecC
Confidence 5555442 346799999999988874 67789999999 999 99999987664
No 70
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.66 E-value=2.9e-15 Score=118.94 Aligned_cols=107 Identities=21% Similarity=0.338 Sum_probs=88.9
Q ss_pred HHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc-CCCceEEecCCccchhhhhhccCCCCceeEE
Q 024647 26 FITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK-LPNIRYELTSPAMSIAELEQNVAAQSTVDLV 104 (265)
Q Consensus 26 ~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv 104 (265)
.+....+++.+|||+|||+|.++..+++.+.+++++|+|+.+++.+++ .+++.+.. +|+..+++++++||+|
T Consensus 39 ~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~-------~d~~~~~~~~~~~D~i 111 (195)
T 3cgg_A 39 LIDAMAPRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFPEARWVV-------GDLSVDQISETDFDLI 111 (195)
T ss_dssp HHHHHSCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSEEEE-------CCTTTSCCCCCCEEEE
T ss_pred HHHHhccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCCCCcEEE-------cccccCCCCCCceeEE
Confidence 444445677899999999999999999998899999999999999886 45778877 5566666677899999
Q ss_pred Eec-cccccCC---hhHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 105 TIA-QAMHWFD---LPQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 105 ~~~-~~~~~~~---~~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
+++ ..+|+++ ...+++++.++|+ |||.+++.....
T Consensus 112 ~~~~~~~~~~~~~~~~~~l~~~~~~l~-~~G~l~~~~~~~ 150 (195)
T 3cgg_A 112 VSAGNVMGFLAEDGREPALANIHRALG-ADGRAVIGFGAG 150 (195)
T ss_dssp EECCCCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEETT
T ss_pred EECCcHHhhcChHHHHHHHHHHHHHhC-CCCEEEEEeCCC
Confidence 998 6788773 3679999999999 999999866543
No 71
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.65 E-value=1.9e-16 Score=127.15 Aligned_cols=110 Identities=17% Similarity=0.147 Sum_probs=87.9
Q ss_pred HHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC-----CCceEEecCCccchhhhhhccC
Q 024647 22 ELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL-----PNIRYELTSPAMSIAELEQNVA 96 (265)
Q Consensus 22 ~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~d~~~~~~ 96 (265)
..+..+....+++ +|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++. .++.+.. +|+..+++
T Consensus 19 ~~l~~~~~~~~~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-------~d~~~~~~ 90 (202)
T 2kw5_A 19 DFLVSVANQIPQG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQ-------SNLADFDI 90 (202)
T ss_dssp SSHHHHHHHSCSS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTCCEEEEC-------CBTTTBSC
T ss_pred HHHHHHHHhCCCC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEE-------cChhhcCC
Confidence 3444444455666 999999999999999999988999999999999988753 2566666 66677777
Q ss_pred CCCceeEEEeccccccC--ChhHHHHHHHHHhcCCCcEEEEEecCCC
Q 024647 97 AQSTVDLVTIAQAMHWF--DLPQFYNQVKWVLKKPNGVIATWCYTVP 141 (265)
Q Consensus 97 ~~~~~Dlv~~~~~~~~~--~~~~~l~~~~~~Lk~pgG~l~~~~~~~~ 141 (265)
++++||+|++.. .|+. +...+++++.++|+ |||.+++..+...
T Consensus 91 ~~~~fD~v~~~~-~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 91 VADAWEGIVSIF-CHLPSSLRQQLYPKVYQGLK-PGGVFILEGFAPE 135 (202)
T ss_dssp CTTTCSEEEEEC-CCCCHHHHHHHHHHHHTTCC-SSEEEEEEEECTT
T ss_pred CcCCccEEEEEh-hcCCHHHHHHHHHHHHHhcC-CCcEEEEEEeccc
Confidence 778999999964 3443 56789999999999 9999999777543
No 72
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.65 E-value=1.1e-15 Score=129.31 Aligned_cols=106 Identities=25% Similarity=0.252 Sum_probs=85.9
Q ss_pred HHHHHHhhC--CCCCeEEEEcCCcchhHHHHHh-cCCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhh
Q 024647 23 LFKFITSKT--TNHELAWDVGTGSGQAAASLSG-IFENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELE 92 (265)
Q Consensus 23 l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~ 92 (265)
.++.+.... +++.+|||||||+|.++..+++ .+.+|+|+|+|+.+++.+++. .++.+.. +|+.
T Consensus 52 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~-------~d~~ 124 (287)
T 1kpg_A 52 KIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLL-------AGWE 124 (287)
T ss_dssp HHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE-------SCGG
T ss_pred HHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEE-------CChh
Confidence 344444443 4667999999999999999984 566999999999999988752 3677777 5666
Q ss_pred hccCCCCceeEEEeccccccC---ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 93 QNVAAQSTVDLVTIAQAMHWF---DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 93 ~~~~~~~~~Dlv~~~~~~~~~---~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+++ ++||+|++..++|++ ++..+++++.++|| |||.+++..+.
T Consensus 125 ~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 170 (287)
T 1kpg_A 125 QFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLP-ADGVMLLHTIT 170 (287)
T ss_dssp GCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSC-TTCEEEEEEEE
T ss_pred hCC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcC-CCCEEEEEEec
Confidence 554 789999999999888 46789999999999 99999986664
No 73
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.65 E-value=4.8e-16 Score=126.04 Aligned_cols=111 Identities=14% Similarity=0.183 Sum_probs=85.3
Q ss_pred HHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCce
Q 024647 22 ELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTV 101 (265)
Q Consensus 22 ~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 101 (265)
.+++.+... .++.+|||+|||+|.++..++ .+|+|+|+|+. ++.+.. +|+.++++++++|
T Consensus 57 ~~~~~l~~~-~~~~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~---------~~~~~~-------~d~~~~~~~~~~f 116 (215)
T 2zfu_A 57 RIARDLRQR-PASLVVADFGCGDCRLASSIR---NPVHCFDLASL---------DPRVTV-------CDMAQVPLEDESV 116 (215)
T ss_dssp HHHHHHHTS-CTTSCEEEETCTTCHHHHHCC---SCEEEEESSCS---------STTEEE-------SCTTSCSCCTTCE
T ss_pred HHHHHHhcc-CCCCeEEEECCcCCHHHHHhh---ccEEEEeCCCC---------CceEEE-------eccccCCCCCCCE
Confidence 345544432 566789999999999998883 68999999988 466666 5666777778899
Q ss_pred eEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecCCCC-CChHHHHhhcc
Q 024647 102 DLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYTVPE-VNVSVDAVFQP 153 (265)
Q Consensus 102 Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~-~~~~~~~~~~~ 153 (265)
|+|++..++|+.++..+++++.++|+ |||.+++..+.... ....+.+++++
T Consensus 117 D~v~~~~~l~~~~~~~~l~~~~~~L~-~gG~l~i~~~~~~~~~~~~~~~~l~~ 168 (215)
T 2zfu_A 117 DVAVFCLSLMGTNIRDFLEEANRVLK-PGGLLKVAEVSSRFEDVRTFLRAVTK 168 (215)
T ss_dssp EEEEEESCCCSSCHHHHHHHHHHHEE-EEEEEEEEECGGGCSCHHHHHHHHHH
T ss_pred eEEEEehhccccCHHHHHHHHHHhCC-CCeEEEEEEcCCCCCCHHHHHHHHHH
Confidence 99999999998789999999999999 99999987654321 12444444443
No 74
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.65 E-value=4.4e-16 Score=133.09 Aligned_cols=103 Identities=12% Similarity=0.123 Sum_probs=77.8
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCcEEEEcCCHHHHHHHHcC---CC---------ceEEecCCccchhhh--hhc--c
Q 024647 33 NHELAWDVGTGSGQAAASLSGI-FENVIGTETSPKQIEFATKL---PN---------IRYELTSPAMSIAEL--EQN--V 95 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~---~~---------~~~~~~~~~~~~~d~--~~~--~ 95 (265)
++.+|||||||+|..+..++.. +.+|+|+|+|+.|++.|+++ .+ +.+.+..+. +|. +++ +
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~---~d~~~~~l~~~ 124 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIR---SDTFVSSVREV 124 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTT---SSSHHHHHHTT
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcc---cchhhhhhhcc
Confidence 4678999999999877666554 46899999999999999853 11 345553321 222 322 2
Q ss_pred CCCCceeEEEeccccccC-C---hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 96 AAQSTVDLVTIAQAMHWF-D---LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 96 ~~~~~~Dlv~~~~~~~~~-~---~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
.++++||+|+|.+++||+ + ...+++++.++|| |||.|++.++.
T Consensus 125 ~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~Lk-pGG~~i~~~~~ 171 (302)
T 2vdw_A 125 FYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTA-SGGKVLITTMD 171 (302)
T ss_dssp CCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred ccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcC-CCCEEEEEeCC
Confidence 456799999999999985 3 4689999999999 99999987764
No 75
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.64 E-value=2.9e-16 Score=129.62 Aligned_cols=109 Identities=13% Similarity=0.080 Sum_probs=82.5
Q ss_pred HHHHHHHHhh-CCCCCeEEEEcCCcchhHHHHHhcC-CcEEEEcCCHHHHHHHHcC-----CCceEEecCCccchhhhhh
Q 024647 21 EELFKFITSK-TTNHELAWDVGTGSGQAAASLSGIF-ENVIGTETSPKQIEFATKL-----PNIRYELTSPAMSIAELEQ 93 (265)
Q Consensus 21 ~~l~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~d~~~ 93 (265)
..+++.+... ..++.+|||||||+|..+..++++. .+|++||+|+.|++.|++. .++.+... |++.
T Consensus 47 ~~~m~~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~-------~a~~ 119 (236)
T 3orh_A 47 TPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG-------LWED 119 (236)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES-------CHHH
T ss_pred HHHHHHHHHhhccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEee-------hHHh
Confidence 3445555444 3567899999999999999999876 4799999999999999752 34566663 3333
Q ss_pred c--cCCCCceeEEEec-----cccccC-ChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 94 N--VAAQSTVDLVTIA-----QAMHWF-DLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 94 ~--~~~~~~~Dlv~~~-----~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
+ ++++++||.|+.. ...++. ++..+++++.|+|| |||+|++.+
T Consensus 120 ~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLk-PGG~l~f~~ 170 (236)
T 3orh_A 120 VAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLK-PGGVLTYCN 170 (236)
T ss_dssp HGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEE-EEEEEEECC
T ss_pred hcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeC-CCCEEEEEe
Confidence 2 4678899999753 333444 78899999999999 999998754
No 76
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.64 E-value=3.9e-16 Score=139.16 Aligned_cols=113 Identities=14% Similarity=0.127 Sum_probs=91.5
Q ss_pred HHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCc
Q 024647 23 LFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQST 100 (265)
Q Consensus 23 l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 100 (265)
+.+.+.... +++.+|||||||+|.++..+++++.+|+|+|+|+.|++.|++. ++..... .+..++.+.+++++++
T Consensus 95 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~-~~~~~~~--~~~~~~~~~l~~~~~~ 171 (416)
T 4e2x_A 95 LARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK-GIRVRTD--FFEKATADDVRRTEGP 171 (416)
T ss_dssp HHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT-TCCEECS--CCSHHHHHHHHHHHCC
T ss_pred HHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc-CCCccee--eechhhHhhcccCCCC
Confidence 344444443 3567999999999999999999999999999999999999874 3443332 1223566677777789
Q ss_pred eeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 101 VDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 101 ~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
||+|++..++|++ |+..+++++.++|| |||.+++..+.
T Consensus 172 fD~I~~~~vl~h~~d~~~~l~~~~r~Lk-pgG~l~i~~~~ 210 (416)
T 4e2x_A 172 ANVIYAANTLCHIPYVQSVLEGVDALLA-PDGVFVFEDPY 210 (416)
T ss_dssp EEEEEEESCGGGCTTHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred EEEEEECChHHhcCCHHHHHHHHHHHcC-CCeEEEEEeCC
Confidence 9999999999999 99999999999999 99999986654
No 77
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.64 E-value=1.5e-15 Score=130.59 Aligned_cols=108 Identities=18% Similarity=0.174 Sum_probs=87.8
Q ss_pred HHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhc-CCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhh
Q 024647 23 LFKFITSKT--TNHELAWDVGTGSGQAAASLSGI-FENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELE 92 (265)
Q Consensus 23 l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~ 92 (265)
.++.+.... .++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.+++. .++.+.. +|+.
T Consensus 78 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~-------~d~~ 150 (318)
T 2fk8_A 78 KVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLL-------QGWE 150 (318)
T ss_dssp HHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE-------SCGG
T ss_pred HHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE-------CChH
Confidence 344555543 46689999999999999999987 77999999999999998752 3477777 5555
Q ss_pred hccCCCCceeEEEeccccccC---ChhHHHHHHHHHhcCCCcEEEEEecCCC
Q 024647 93 QNVAAQSTVDLVTIAQAMHWF---DLPQFYNQVKWVLKKPNGVIATWCYTVP 141 (265)
Q Consensus 93 ~~~~~~~~~Dlv~~~~~~~~~---~~~~~l~~~~~~Lk~pgG~l~~~~~~~~ 141 (265)
+++ ++||+|++..++|++ ++..+++++.++|+ |||.+++..+...
T Consensus 151 ~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~ 198 (318)
T 2fk8_A 151 DFA---EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMP-ADGRMTVQSSVSY 198 (318)
T ss_dssp GCC---CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSC-TTCEEEEEEEECC
T ss_pred HCC---CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcC-CCcEEEEEEeccC
Confidence 553 789999999999998 45789999999999 9999998776543
No 78
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.64 E-value=7.8e-16 Score=127.75 Aligned_cols=129 Identities=21% Similarity=0.288 Sum_probs=94.7
Q ss_pred ChhHHHHHHHHHhhhCCCC---cHHHHHHH---HhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHH
Q 024647 1 MAELFIKQAKQYAETRPNY---PEELFKFI---TSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFAT 72 (265)
Q Consensus 1 ~~~~f~~~a~~Y~~~rp~y---~~~l~~~l---~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~ 72 (265)
|...|+..|..|+..-+.. ....++++ .... +++.+|||+|||+|..+..+++.+.+|+|+|+|+.|++.++
T Consensus 1 m~~~y~~~a~~yd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~ 80 (252)
T 1wzn_A 1 MYELYTLLAEYYDTIYRRRIERVKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVAR 80 (252)
T ss_dssp CCGGGTTTGGGHHHHTHHHHHTHHHHHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHH
Confidence 5567888888888743211 11222222 2222 35679999999999999999999889999999999999887
Q ss_pred cC-----CCceEEecCCccchhhhhhccCCCCceeEEEecc-ccccCC---hhHHHHHHHHHhcCCCcEEEEEec
Q 024647 73 KL-----PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ-AMHWFD---LPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 73 ~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~-~~~~~~---~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+. .++.+.+ +|+.+++.+ ++||+|++.. .+++++ ...+++++.++|+ |||.+++..+
T Consensus 81 ~~~~~~~~~v~~~~-------~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~-pgG~li~~~~ 146 (252)
T 1wzn_A 81 RKAKERNLKIEFLQ-------GDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALK-PGGVFITDFP 146 (252)
T ss_dssp HHHHHTTCCCEEEE-------SCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred HHHHhcCCceEEEE-------CChhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcC-CCeEEEEecc
Confidence 52 3567777 666666544 6899999874 455553 4579999999999 9999987543
No 79
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.64 E-value=1.2e-15 Score=129.26 Aligned_cols=108 Identities=16% Similarity=0.170 Sum_probs=88.8
Q ss_pred cHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC-----CCceEEecCCccchhhhhhc
Q 024647 20 PEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL-----PNIRYELTSPAMSIAELEQN 94 (265)
Q Consensus 20 ~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~d~~~~ 94 (265)
...+++.+... ++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++. .++.+.. +|+.+.
T Consensus 109 ~~~~~~~~~~~--~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-------~d~~~~ 179 (286)
T 3m70_A 109 HGDVVDAAKII--SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTAL-------YDINAA 179 (286)
T ss_dssp CHHHHHHHHHS--CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE-------CCGGGC
T ss_pred HHHHHHHhhcc--CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEE-------eccccc
Confidence 45666665432 668899999999999999999988999999999999988752 1677777 666776
Q ss_pred cCCCCceeEEEeccccccCCh---hHHHHHHHHHhcCCCcEEEEEec
Q 024647 95 VAAQSTVDLVTIAQAMHWFDL---PQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 95 ~~~~~~~Dlv~~~~~~~~~~~---~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+. +++||+|+++.++|+++. ..+++++.++|+ |||.+++...
T Consensus 180 ~~-~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~ 224 (286)
T 3m70_A 180 NI-QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTN-VGGYNLIVAA 224 (286)
T ss_dssp CC-CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEE-EEEEEEEEEE
T ss_pred cc-cCCccEEEEccchhhCCHHHHHHHHHHHHHhcC-CCcEEEEEEe
Confidence 55 789999999999999843 379999999999 9999877554
No 80
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.63 E-value=1e-15 Score=128.73 Aligned_cols=104 Identities=14% Similarity=0.201 Sum_probs=80.9
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHH------HHHHHHcC-------CCceEEecCCccchhhhhhcc
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPK------QIEFATKL-------PNIRYELTSPAMSIAELEQNV 95 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~------~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~ 95 (265)
+++.+|||||||+|.++..+++++ .+|+|+|+|+. |++.+++. +++.+...+ .+ ....++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d-~~---~~~~~~ 117 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT-NL---SDDLGP 117 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC-CT---TTCCGG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC-hh---hhccCC
Confidence 567899999999999999999885 68999999997 88887652 357777643 00 023455
Q ss_pred CCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 96 AAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 96 ~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
+++++||+|++..++|++ ++..+++.+.++++ |||.+++..+..
T Consensus 118 ~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~-~gG~l~~~~~~~ 162 (275)
T 3bkx_A 118 IADQHFDRVVLAHSLWYFASANALALLFKNMAA-VCDHVDVAEWSM 162 (275)
T ss_dssp GTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTT-TCSEEEEEEECS
T ss_pred CCCCCEEEEEEccchhhCCCHHHHHHHHHHHhC-CCCEEEEEEecC
Confidence 677899999999999999 77776666666666 799999876653
No 81
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.63 E-value=2.9e-16 Score=133.28 Aligned_cols=105 Identities=12% Similarity=0.105 Sum_probs=74.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHh-cCCcEEEEcCCHHHHHHHHcC-C-------------CceEEecC-------------
Q 024647 32 TNHELAWDVGTGSGQAAASLSG-IFENVIGTETSPKQIEFATKL-P-------------NIRYELTS------------- 83 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~-~-------------~~~~~~~~------------- 83 (265)
.++.+|||||||+|.++..++. .+.+|+|+|+|+.|++.|++. . ++.+..+.
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 3568999999999996554444 356899999999999988751 0 01111100
Q ss_pred --Cccchhhhhh-cc-----CCCCceeEEEecccccc----C-ChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 84 --PAMSIAELEQ-NV-----AAQSTVDLVTIAQAMHW----F-DLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 84 --~~~~~~d~~~-~~-----~~~~~~Dlv~~~~~~~~----~-~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
..+...|+.. ++ +++++||+|+++.++|| + ++..+++++.++|| |||.|++..
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~Lk-pGG~l~~~~ 215 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLR-PGGHLLLIG 215 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE-EEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcC-CCCEEEEEE
Confidence 0011135554 33 33467999999999999 5 67899999999999 999999864
No 82
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.63 E-value=1.5e-15 Score=123.33 Aligned_cols=100 Identities=20% Similarity=0.209 Sum_probs=81.1
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHc------CCCceEEecCCccchhhhhhcc--CCCCc
Q 024647 31 TTNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATK------LPNIRYELTSPAMSIAELEQNV--AAQST 100 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~d~~~~~--~~~~~ 100 (265)
.+++.+|||||||+|.++..+++.. .+|+|+|+|+.|++.|++ .+|+.+..++ +..++ +++++
T Consensus 36 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d-------~~~l~~~~~~~~ 108 (213)
T 2fca_A 36 GNDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNID-------ADTLTDVFEPGE 108 (213)
T ss_dssp TSCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCC-------GGGHHHHCCTTS
T ss_pred CCCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCC-------HHHHHhhcCcCC
Confidence 3456789999999999999999885 479999999999998875 3578888744 44443 56789
Q ss_pred eeEEEeccccccCC---------hhHHHHHHHHHhcCCCcEEEEEec
Q 024647 101 VDLVTIAQAMHWFD---------LPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 101 ~Dlv~~~~~~~~~~---------~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
||.|++++..+|.. ...+++++.++|+ |||.|++.+.
T Consensus 109 ~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~Lk-pgG~l~~~td 154 (213)
T 2fca_A 109 VKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMG-KGGSIHFKTD 154 (213)
T ss_dssp CCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHT-TSCEEEEEES
T ss_pred cCEEEEECCCCCcCccccccccCcHHHHHHHHHHcC-CCCEEEEEeC
Confidence 99999887776662 3579999999999 9999998664
No 83
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.63 E-value=1.7e-15 Score=133.28 Aligned_cols=124 Identities=15% Similarity=0.217 Sum_probs=95.0
Q ss_pred HHHHHHHHhhC----CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC-----CCceEEecCCccchhhh
Q 024647 21 EELFKFITSKT----TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL-----PNIRYELTSPAMSIAEL 91 (265)
Q Consensus 21 ~~l~~~l~~~~----~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~d~ 91 (265)
..+++.+.... .++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.+++. .++.+.. +|+
T Consensus 217 ~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~-------~D~ 289 (381)
T 3dmg_A 217 LLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALH-------SDV 289 (381)
T ss_dssp HHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEE-------CST
T ss_pred HHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEE-------cch
Confidence 34555554433 3567999999999999999999989999999999999998752 2466666 566
Q ss_pred hhccCCCCceeEEEecccccc-----C-ChhHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhhc
Q 024647 92 EQNVAAQSTVDLVTIAQAMHW-----F-DLPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVFQ 152 (265)
Q Consensus 92 ~~~~~~~~~~Dlv~~~~~~~~-----~-~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~~ 152 (265)
.+...++++||+|+++..+|+ . +...+++++.++|+ |||.+++...........+.+.|.
T Consensus 290 ~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~Lk-pGG~l~iv~n~~l~~~~~l~~~f~ 355 (381)
T 3dmg_A 290 DEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLR-PGGVFFLVSNPFLKYEPLLEEKFG 355 (381)
T ss_dssp TTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEE-EEEEEEEEECTTSCHHHHHHHHHS
T ss_pred hhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcC-cCcEEEEEEcCCCChHHHHHHhhc
Confidence 666555689999999999998 3 45689999999999 999999877654433344444443
No 84
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.62 E-value=4.1e-15 Score=119.65 Aligned_cols=111 Identities=23% Similarity=0.288 Sum_probs=88.7
Q ss_pred CcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC------CCceEEecCCccch
Q 024647 19 YPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL------PNIRYELTSPAMSI 88 (265)
Q Consensus 19 y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~ 88 (265)
.++++...+.... .++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.+++. .++.+..
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~------- 96 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVE------- 96 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEE-------
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEe-------
Confidence 4566656665554 466899999999999999999988 6799999999999998752 5677777
Q ss_pred hhhhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 89 AELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 89 ~d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|+.+.....++||+|++...++ +...+++++.++|+ |||.+++....
T Consensus 97 ~d~~~~~~~~~~~D~i~~~~~~~--~~~~~l~~~~~~Lk-pgG~l~~~~~~ 144 (204)
T 3e05_A 97 AFAPEGLDDLPDPDRVFIGGSGG--MLEEIIDAVDRRLK-SEGVIVLNAVT 144 (204)
T ss_dssp CCTTTTCTTSCCCSEEEESCCTT--CHHHHHHHHHHHCC-TTCEEEEEECB
T ss_pred CChhhhhhcCCCCCEEEECCCCc--CHHHHHHHHHHhcC-CCeEEEEEecc
Confidence 44433333346899999998776 78899999999999 99999987654
No 85
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.62 E-value=1.2e-15 Score=142.69 Aligned_cols=115 Identities=18% Similarity=0.257 Sum_probs=93.4
Q ss_pred CCCCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHc------------CCCce
Q 024647 16 RPNYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATK------------LPNIR 78 (265)
Q Consensus 16 rp~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~------------~~~~~ 78 (265)
.|.+....++++.... .++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.|++ ..++.
T Consensus 702 sPPL~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVe 781 (950)
T 3htx_A 702 KPPLSKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSAT 781 (950)
T ss_dssp SSCHHHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEE
T ss_pred CchHHHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceE
Confidence 4555555666665554 367899999999999999999988 589999999999999865 24577
Q ss_pred EEecCCccchhhhhhccCCCCceeEEEeccccccCChh---HHHHHHHHHhcCCCcEEEEEecC
Q 024647 79 YELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLP---QFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 79 ~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~~~---~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+.+ +|+.+++..+++||+|++..++||++.. .+++++.++|| || .+++.+++
T Consensus 782 fiq-------GDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLK-PG-~LIISTPN 836 (950)
T 3htx_A 782 LYD-------GSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFH-PK-LLIVSTPN 836 (950)
T ss_dssp EEE-------SCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTC-CS-EEEEEECB
T ss_pred EEE-------CchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcC-CC-EEEEEecC
Confidence 777 6777888888999999999999999533 48999999999 99 77776664
No 86
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.62 E-value=7.8e-16 Score=132.11 Aligned_cols=111 Identities=13% Similarity=0.158 Sum_probs=85.4
Q ss_pred HHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhc-CCcEEEEcCCHHHHHHHHcC-------------CCceEEecCCccc
Q 024647 22 ELFKFITSKTTNHELAWDVGTGSGQAAASLSGI-FENVIGTETSPKQIEFATKL-------------PNIRYELTSPAMS 87 (265)
Q Consensus 22 ~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------------~~~~~~~~~~~~~ 87 (265)
.+++.+....+++.+|||+|||+|..+..+++. ..+|+|+|+|+.|++.+++. .++.+..
T Consensus 23 ~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~------ 96 (313)
T 3bgv_A 23 EFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFIT------ 96 (313)
T ss_dssp HHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEE------
T ss_pred HHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEE------
Confidence 344444444456789999999999999999875 45899999999999988752 1566777
Q ss_pred hhhhhhcc----C--CCCceeEEEeccccccC--Ch---hHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 88 IAELEQNV----A--AQSTVDLVTIAQAMHWF--DL---PQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 88 ~~d~~~~~----~--~~~~~Dlv~~~~~~~~~--~~---~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
+|++..+ + ++++||+|+++.++||+ +. ..+++++.++|+ |||.+++..+..
T Consensus 97 -~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~~~ 158 (313)
T 3bgv_A 97 -ADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLS-PGGYFIGTTPNS 158 (313)
T ss_dssp -CCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEE-EEEEEEEEEECH
T ss_pred -ecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhC-CCcEEEEecCCh
Confidence 5555553 3 34589999999999997 43 489999999999 999999877653
No 87
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.62 E-value=5.3e-15 Score=119.32 Aligned_cols=113 Identities=19% Similarity=0.182 Sum_probs=87.2
Q ss_pred hCCCCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC------C-CceEEecCCc
Q 024647 15 TRPNYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL------P-NIRYELTSPA 85 (265)
Q Consensus 15 ~rp~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~-~~~~~~~~~~ 85 (265)
..+..++++...+.... .++.+|||+|||+|.++..+++...+|+|+|+|+.|++.|++. + ++.+..
T Consensus 35 ~~~~~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~---- 110 (204)
T 3njr_A 35 DGQITKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQ---- 110 (204)
T ss_dssp SSCCCCHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE----
T ss_pred CCCCCcHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEe----
Confidence 33444556655555443 4668999999999999999999988999999999999988752 3 678887
Q ss_pred cchhhhhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 86 MSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 86 ~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|+.+.....++||+|++...+ +.. +++++.++|+ |||.+++....
T Consensus 111 ---~d~~~~~~~~~~~D~v~~~~~~---~~~-~l~~~~~~Lk-pgG~lv~~~~~ 156 (204)
T 3njr_A 111 ---GTAPAALADLPLPEAVFIGGGG---SQA-LYDRLWEWLA-PGTRIVANAVT 156 (204)
T ss_dssp ---SCTTGGGTTSCCCSEEEECSCC---CHH-HHHHHHHHSC-TTCEEEEEECS
T ss_pred ---CchhhhcccCCCCCEEEECCcc---cHH-HHHHHHHhcC-CCcEEEEEecC
Confidence 4445432234579999987643 666 9999999999 99999987765
No 88
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.61 E-value=2.9e-15 Score=122.55 Aligned_cols=120 Identities=18% Similarity=0.142 Sum_probs=92.8
Q ss_pred HHhhhCCCCcHHHHHHHHhh-----CCCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHc----CCCce
Q 024647 11 QYAETRPNYPEELFKFITSK-----TTNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATK----LPNIR 78 (265)
Q Consensus 11 ~Y~~~rp~y~~~l~~~l~~~-----~~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~----~~~~~ 78 (265)
-|..+-|. -.++...|... .+++++|||+|||+|.++..+++.. .+|+|+|+++.|++.+++ .+|+.
T Consensus 51 e~r~w~p~-rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~ 129 (233)
T 4df3_A 51 EYREWNAY-RSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIF 129 (233)
T ss_dssp EEEECCTT-TCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEE
T ss_pred eeeeECCC-chHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCee
Confidence 35556664 45666666543 2578999999999999999999873 369999999999998764 46888
Q ss_pred EEecCCccchhhhhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 79 YELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 79 ~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
.+..+. .+.+..+...+++|+|++....|+ +...++.++.++|| |||.+++..
T Consensus 130 ~V~~d~----~~p~~~~~~~~~vDvVf~d~~~~~-~~~~~l~~~~r~LK-pGG~lvI~i 182 (233)
T 4df3_A 130 PILGDA----RFPEKYRHLVEGVDGLYADVAQPE-QAAIVVRNARFFLR-DGGYMLMAI 182 (233)
T ss_dssp EEESCT----TCGGGGTTTCCCEEEEEECCCCTT-HHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred EEEEec----cCccccccccceEEEEEEeccCCh-hHHHHHHHHHHhcc-CCCEEEEEE
Confidence 888665 455666667789999987654332 56689999999999 999998754
No 89
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.61 E-value=3.8e-15 Score=116.67 Aligned_cols=117 Identities=16% Similarity=0.125 Sum_probs=88.3
Q ss_pred HHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCc
Q 024647 21 EELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQST 100 (265)
Q Consensus 21 ~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 100 (265)
..+++.+.....++.+|||+|||+|.++..+++.+ +|+|+|+|+.|++. ..++.+.+ +|+.+ +.++++
T Consensus 11 ~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~---~~~~~~~~-------~d~~~-~~~~~~ 78 (170)
T 3q87_B 11 YTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES---HRGGNLVR-------ADLLC-SINQES 78 (170)
T ss_dssp HHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT---CSSSCEEE-------CSTTT-TBCGGG
T ss_pred HHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc---ccCCeEEE-------CChhh-hcccCC
Confidence 34455544333556799999999999999999999 99999999999998 36788888 55554 345689
Q ss_pred eeEEEeccccccC-Ch---------hHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhhc
Q 024647 101 VDLVTIAQAMHWF-DL---------PQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVFQ 152 (265)
Q Consensus 101 ~Dlv~~~~~~~~~-~~---------~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~~ 152 (265)
||+|+++..+|+. +. ..++.++.+.| |||.+++....... ...+.++++
T Consensus 79 fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--pgG~l~~~~~~~~~-~~~l~~~l~ 137 (170)
T 3q87_B 79 VDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV--TVGMLYLLVIEANR-PKEVLARLE 137 (170)
T ss_dssp CSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC--CSSEEEEEEEGGGC-HHHHHHHHH
T ss_pred CCEEEECCCCccCCccccccCCcchHHHHHHHHhhC--CCCEEEEEEecCCC-HHHHHHHHH
Confidence 9999999999986 33 47889999998 69999886654322 244444443
No 90
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.61 E-value=3.8e-15 Score=116.03 Aligned_cols=118 Identities=15% Similarity=0.124 Sum_probs=88.7
Q ss_pred hCCCCcHHHHHHHHhh----CCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC----C-CceEEecCCc
Q 024647 15 TRPNYPEELFKFITSK----TTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL----P-NIRYELTSPA 85 (265)
Q Consensus 15 ~rp~y~~~l~~~l~~~----~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~-~~~~~~~~~~ 85 (265)
.||. ++.+.+.+... .+++.+|||+|||+|..+..+++.+++|+|+|+|+.|++.+++. . ++.+...
T Consensus 20 ~~~~-~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~--- 95 (171)
T 1ws6_A 20 ARPS-PVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVAL--- 95 (171)
T ss_dssp CCCC-CHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECS---
T ss_pred CCCC-HHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCCceEEEec---
Confidence 4665 45555555443 23678999999999999999999988899999999999998752 1 6777774
Q ss_pred cchhhhhhc----cCCCCceeEEEeccccccCChhHHHHHHH--HHhcCCCcEEEEEecCCCC
Q 024647 86 MSIAELEQN----VAAQSTVDLVTIAQAMHWFDLPQFYNQVK--WVLKKPNGVIATWCYTVPE 142 (265)
Q Consensus 86 ~~~~d~~~~----~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~--~~Lk~pgG~l~~~~~~~~~ 142 (265)
|+.+. +...++||+|+++..+| .+...+++.+. ++|+ |||.+++.+.....
T Consensus 96 ----d~~~~~~~~~~~~~~~D~i~~~~~~~-~~~~~~~~~~~~~~~L~-~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 96 ----PVEVFLPEAKAQGERFTVAFMAPPYA-MDLAALFGELLASGLVE-AGGLYVLQHPKDLY 152 (171)
T ss_dssp ----CHHHHHHHHHHTTCCEEEEEECCCTT-SCTTHHHHHHHHHTCEE-EEEEEEEEEETTSC
T ss_pred ----cHHHHHHhhhccCCceEEEEECCCCc-hhHHHHHHHHHhhcccC-CCcEEEEEeCCccC
Confidence 43332 11234899999998877 66677888887 9999 99999987765433
No 91
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.60 E-value=8.6e-16 Score=123.62 Aligned_cols=99 Identities=16% Similarity=0.027 Sum_probs=78.9
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC--------CCceEEecCCccchhhhhhccC--CCCc-
Q 024647 33 NHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL--------PNIRYELTSPAMSIAELEQNVA--AQST- 100 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~--------~~~~~~~~~~~~~~~d~~~~~~--~~~~- 100 (265)
++.+|||+|||+|.++..++.++. +|+|+|+|+.|++.|++. .++.+.. +|+.++.. ++++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~-------~d~~~~~~~~~~~~~ 125 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVIN-------QSSLDFLKQPQNQPH 125 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEEC-------SCHHHHTTSCCSSCC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEE-------CCHHHHHHhhccCCC
Confidence 567899999999999998777764 799999999999998752 3667777 55555432 3578
Q ss_pred eeEEEeccccccCChhHHHHHH--HHHhcCCCcEEEEEecC
Q 024647 101 VDLVTIAQAMHWFDLPQFYNQV--KWVLKKPNGVIATWCYT 139 (265)
Q Consensus 101 ~Dlv~~~~~~~~~~~~~~l~~~--~~~Lk~pgG~l~~~~~~ 139 (265)
||+|+++..+|.-+...+++.+ .++|+ |||.+++.+..
T Consensus 126 fD~I~~~~~~~~~~~~~~l~~~~~~~~Lk-pgG~l~i~~~~ 165 (201)
T 2ift_A 126 FDVVFLDPPFHFNLAEQAISLLCENNWLK-PNALIYVETEK 165 (201)
T ss_dssp EEEEEECCCSSSCHHHHHHHHHHHTTCEE-EEEEEEEEEES
T ss_pred CCEEEECCCCCCccHHHHHHHHHhcCccC-CCcEEEEEECC
Confidence 9999999887754677888888 66899 99999986654
No 92
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.60 E-value=2e-15 Score=129.18 Aligned_cols=107 Identities=19% Similarity=0.171 Sum_probs=86.6
Q ss_pred HHHHhhCCCCCeEEEEcCCcchhHHHHH-hc--CCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhc
Q 024647 25 KFITSKTTNHELAWDVGTGSGQAAASLS-GI--FENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQN 94 (265)
Q Consensus 25 ~~l~~~~~~~~~vlDvGcG~G~~~~~l~-~~--~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~ 94 (265)
+.+....+++.+|||||||+|..+..++ .. ..+|+|+|+|+.+++.+++. .++.+.. +|+.++
T Consensus 110 ~~l~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~-------~d~~~~ 182 (305)
T 3ocj_A 110 RALQRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHR-------QDAWKL 182 (305)
T ss_dssp HHHHHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEE-------CCGGGC
T ss_pred HHHHhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEE-------CchhcC
Confidence 3344445778899999999999999995 22 34899999999999998752 1267777 667777
Q ss_pred cCCCCceeEEEeccccccC-ChhH---HHHHHHHHhcCCCcEEEEEecCC
Q 024647 95 VAAQSTVDLVTIAQAMHWF-DLPQ---FYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 95 ~~~~~~~Dlv~~~~~~~~~-~~~~---~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
+++ ++||+|+++.++|++ ++.. +++++.++|+ |||.+++.++..
T Consensus 183 ~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~ 230 (305)
T 3ocj_A 183 DTR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALK-PGGALVTSFLTP 230 (305)
T ss_dssp CCC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEE-EEEEEEEECCCC
T ss_pred Ccc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcC-CCeEEEEEecCC
Confidence 766 899999999999988 7765 7999999999 999999977653
No 93
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.60 E-value=3.3e-15 Score=120.31 Aligned_cols=116 Identities=13% Similarity=0.017 Sum_probs=86.0
Q ss_pred hCCCCcHHHHHHHHhhC---CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC------CCceEEecCC
Q 024647 15 TRPNYPEELFKFITSKT---TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL------PNIRYELTSP 84 (265)
Q Consensus 15 ~rp~y~~~l~~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~~~~~~~~~~ 84 (265)
.||. ++.+.+.+.... .++.+|||+|||+|.++..+++++. +|+++|+|+.|++.|++. .++.+.+
T Consensus 34 ~rp~-~~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~--- 109 (202)
T 2fpo_A 34 LRPT-TDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVN--- 109 (202)
T ss_dssp -----CHHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEEC---
T ss_pred CCCC-HHHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEE---
Confidence 4665 455555554433 1567899999999999999877764 899999999999998752 3677777
Q ss_pred ccchhhhhh-ccCCCCceeEEEeccccccCChhHHHHHHHH--HhcCCCcEEEEEecC
Q 024647 85 AMSIAELEQ-NVAAQSTVDLVTIAQAMHWFDLPQFYNQVKW--VLKKPNGVIATWCYT 139 (265)
Q Consensus 85 ~~~~~d~~~-~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~--~Lk~pgG~l~~~~~~ 139 (265)
+|+.+ ++..+++||+|+++..+|+-+...+++.+.+ +|+ |||.+++.+..
T Consensus 110 ----~D~~~~~~~~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~-pgG~l~i~~~~ 162 (202)
T 2fpo_A 110 ----SNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLA-DEALIYVESEV 162 (202)
T ss_dssp ----SCHHHHHSSCCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEE-EEEEEEEEEEG
T ss_pred ----CCHHHHHhhcCCCCCEEEECCCCCCCcHHHHHHHHHhcCccC-CCcEEEEEECC
Confidence 55555 3445678999999988775577788888876 599 99999886654
No 94
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.60 E-value=5.7e-15 Score=117.11 Aligned_cols=110 Identities=19% Similarity=0.192 Sum_probs=88.3
Q ss_pred HHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC------CC--ceEEecCCccchhhh
Q 024647 22 ELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL------PN--IRYELTSPAMSIAEL 91 (265)
Q Consensus 22 ~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~--~~~~~~~~~~~~~d~ 91 (265)
...+.+.... .++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.+++. .+ +.+.. +|+
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~-------~d~ 111 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVH-------SDL 111 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEE-------CST
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEE-------Cch
Confidence 4455555544 3667999999999999999999888999999999999988752 33 77777 444
Q ss_pred hhccCCCCceeEEEeccccccC--ChhHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 92 EQNVAAQSTVDLVTIAQAMHWF--DLPQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 92 ~~~~~~~~~~Dlv~~~~~~~~~--~~~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
.+. .++++||+|+++..+|+. +...+++++.++|+ |||.+++..+..
T Consensus 112 ~~~-~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~ 160 (194)
T 1dus_A 112 YEN-VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLK-DNGEIWVVIQTK 160 (194)
T ss_dssp TTT-CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEE-EEEEEEEEEEST
T ss_pred hcc-cccCCceEEEECCCcccchhHHHHHHHHHHHHcC-CCCEEEEEECCC
Confidence 443 356789999999998873 56789999999999 999999877753
No 95
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.60 E-value=9.8e-16 Score=124.19 Aligned_cols=96 Identities=21% Similarity=0.234 Sum_probs=72.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHH----HHHcCCCceEEecCCccchhhhhh----ccCCCCce
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIE----FATKLPNIRYELTSPAMSIAELEQ----NVAAQSTV 101 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~----~a~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~ 101 (265)
+++.+|||+|||+|..+..+++.. .+|+|+|+|+.|++ .+++..|+.+...+ +.. .++. ++|
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d-------~~~~~~~~~~~-~~f 127 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFD-------ASKPWKYSGIV-EKV 127 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSC-------TTCGGGTTTTC-CCE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcC-------CCCchhhcccc-cce
Confidence 467899999999999999999876 57999999998654 44545677777643 333 2333 789
Q ss_pred eEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 102 DLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 102 Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
|+|+++...+ .+...+++++.++|| |||.|++..
T Consensus 128 D~V~~~~~~~-~~~~~~l~~~~r~Lk-pgG~l~i~~ 161 (210)
T 1nt2_A 128 DLIYQDIAQK-NQIEILKANAEFFLK-EKGEVVIMV 161 (210)
T ss_dssp EEEEECCCST-THHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred eEEEEeccCh-hHHHHHHHHHHHHhC-CCCEEEEEE
Confidence 9999984221 123346899999999 999999864
No 96
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.59 E-value=8.6e-15 Score=123.39 Aligned_cols=130 Identities=12% Similarity=0.091 Sum_probs=91.6
Q ss_pred HHHHHhhhCCCCcH------HHHHHHHhhC---CCCCeEEEEcCCc---chhHHHHHhcC--CcEEEEcCCHHHHHHHHc
Q 024647 8 QAKQYAETRPNYPE------ELFKFITSKT---TNHELAWDVGTGS---GQAAASLSGIF--ENVIGTETSPKQIEFATK 73 (265)
Q Consensus 8 ~a~~Y~~~rp~y~~------~l~~~l~~~~---~~~~~vlDvGcG~---G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~ 73 (265)
.++.|.+..|.|.. .++..+...+ ....+|||||||+ |.++..+.+.. .+|+++|+|+.|++.|++
T Consensus 43 ~~~~~~~~~p~~~~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~ 122 (274)
T 2qe6_A 43 LADYACKHIPGLKESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRA 122 (274)
T ss_dssp HHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHhcchhHHHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHH
Confidence 45566666666532 2222222222 2347899999999 98887776654 579999999999999875
Q ss_pred C----CCceEEecCCccchh---hh---hhccCCCCceeEEEeccccccC-C--hhHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 74 L----PNIRYELTSPAMSIA---EL---EQNVAAQSTVDLVTIAQAMHWF-D--LPQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 74 ~----~~~~~~~~~~~~~~~---d~---~~~~~~~~~~Dlv~~~~~~~~~-~--~~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
+ .++.++..+..-... .. +. ++.++||+|++..++||+ + +..+++++.++|+ |||.|++.....
T Consensus 123 ~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~--~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~-pGG~l~i~~~~~ 199 (274)
T 2qe6_A 123 LLAKDPNTAVFTADVRDPEYILNHPDVRRM--IDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALA-PGSYLFMTSLVD 199 (274)
T ss_dssp HHTTCTTEEEEECCTTCHHHHHHSHHHHHH--CCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSC-TTCEEEEEEEBC
T ss_pred hcCCCCCeEEEEeeCCCchhhhccchhhcc--CCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCC-CCcEEEEEEecC
Confidence 2 578888865421000 00 11 233589999999999999 4 6789999999999 999999877654
No 97
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.59 E-value=4e-16 Score=130.79 Aligned_cols=99 Identities=15% Similarity=0.106 Sum_probs=75.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC----C-C-----------------------------
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL----P-N----------------------------- 76 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~----~-~----------------------------- 76 (265)
.++.+|||||||+|.++..++..+. +|+|+|+|+.|++.|++. + .
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 3567899999999998888777765 699999999999988741 1 1
Q ss_pred -ce-EEecCCccchhhhhhc-cC---CCCceeEEEeccccccC-----ChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 77 -IR-YELTSPAMSIAELEQN-VA---AQSTVDLVTIAQAMHWF-----DLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 77 -~~-~~~~~~~~~~~d~~~~-~~---~~~~~Dlv~~~~~~~~~-----~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+. +.. +|+.+. ++ ..++||+|++++++|++ +...+++++.++|| |||.|++...
T Consensus 134 ~i~~~~~-------~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LK-PGG~li~~~~ 198 (263)
T 2a14_A 134 AVKRVLK-------CDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLK-PGGHLVTTVT 198 (263)
T ss_dssp HEEEEEE-------CCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE-EEEEEEEEEE
T ss_pred hhheEEe-------ccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcC-CCcEEEEEEe
Confidence 11 344 444442 22 25689999999999985 23579999999999 9999998754
No 98
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.59 E-value=6e-15 Score=121.84 Aligned_cols=95 Identities=21% Similarity=0.211 Sum_probs=77.8
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCcEEEEcCCHHHHHHHHc------CCCceEEecCCccchhhhhhccCC---CCc
Q 024647 32 TNHELAWDVGTGSGQAAASLSGI--FENVIGTETSPKQIEFATK------LPNIRYELTSPAMSIAELEQNVAA---QST 100 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~d~~~~~~~---~~~ 100 (265)
+++.+|||+|||+|..+..++.. ..+|+|+|+|+.|++.+++ ..++.+.. +|+++++.+ +++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~-------~d~~~~~~~~~~~~~ 141 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCH-------DRAETFGQRKDVRES 141 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEE-------SCHHHHTTCTTTTTC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEe-------ccHHHhcccccccCC
Confidence 35679999999999999999854 4589999999999998875 24677877 566666543 578
Q ss_pred eeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 101 VDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 101 ~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
||+|++.. ..+...+++++.++|+ |||.+++..
T Consensus 142 fD~V~~~~---~~~~~~~l~~~~~~Lk-pgG~l~~~~ 174 (240)
T 1xdz_A 142 YDIVTARA---VARLSVLSELCLPLVK-KNGLFVALK 174 (240)
T ss_dssp EEEEEEEC---CSCHHHHHHHHGGGEE-EEEEEEEEE
T ss_pred ccEEEEec---cCCHHHHHHHHHHhcC-CCCEEEEEe
Confidence 99999865 2478899999999999 999998864
No 99
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.59 E-value=1e-15 Score=133.58 Aligned_cols=124 Identities=10% Similarity=0.067 Sum_probs=92.7
Q ss_pred hHHHHHHHHHh--hhC-CCCcHHHHHHHHh-hCCCCCeEEEEcCC------cchhHHHHHhc---CCcEEEEcCCHHHHH
Q 024647 3 ELFIKQAKQYA--ETR-PNYPEELFKFITS-KTTNHELAWDVGTG------SGQAAASLSGI---FENVIGTETSPKQIE 69 (265)
Q Consensus 3 ~~f~~~a~~Y~--~~r-p~y~~~l~~~l~~-~~~~~~~vlDvGcG------~G~~~~~l~~~---~~~v~~vD~s~~~~~ 69 (265)
..|++.|..|. +.+ ..+-..+++.+.. ...++.+||||||| +|..+..+++. ..+|+|+|+|+.|.
T Consensus 182 ~~fd~lA~~Y~tDK~~~~h~y~~~Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~- 260 (419)
T 3sso_A 182 PDLSELSSRYFTPKFGFLHWFTPHYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH- 260 (419)
T ss_dssp CCHHHHHHHTTCTTBSSSCBCHHHHHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-
T ss_pred ccHHHHHHHhCCCcccccchHHHHHHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-
Confidence 36889999995 455 3333556666554 44567899999999 77777777654 35799999999984
Q ss_pred HHHcCCCceEEecCCccchhhhhhccCC------CCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 70 FATKLPNIRYELTSPAMSIAELEQNVAA------QSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 70 ~a~~~~~~~~~~~~~~~~~~d~~~~~~~------~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
...+++.+.+ +|+.++++. +++||+|++..+ |+. +...+++++.++|| |||++++.+.
T Consensus 261 --~~~~rI~fv~-------GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~~d~~~aL~el~rvLK-PGGvlVi~Dl 325 (419)
T 3sso_A 261 --VDELRIRTIQ-------GDQNDAEFLDRIARRYGPFDIVIDDGS-HINAHVRTSFAALFPHVR-PGGLYVIEDM 325 (419)
T ss_dssp --GCBTTEEEEE-------CCTTCHHHHHHHHHHHCCEEEEEECSC-CCHHHHHHHHHHHGGGEE-EEEEEEEECG
T ss_pred --hcCCCcEEEE-------ecccccchhhhhhcccCCccEEEECCc-ccchhHHHHHHHHHHhcC-CCeEEEEEec
Confidence 2346888988 444554443 579999999755 555 88899999999999 9999998544
No 100
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.59 E-value=2.4e-15 Score=118.97 Aligned_cols=119 Identities=15% Similarity=0.140 Sum_probs=91.6
Q ss_pred hhCCCCcHHHHHHHHhhC---CCCCeEEEEcCCcchhHHHHHhcC-CcEEEEcCCHHHHHHHHcC-------CCceEEec
Q 024647 14 ETRPNYPEELFKFITSKT---TNHELAWDVGTGSGQAAASLSGIF-ENVIGTETSPKQIEFATKL-------PNIRYELT 82 (265)
Q Consensus 14 ~~rp~y~~~l~~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~-------~~~~~~~~ 82 (265)
..||. ++.+.+.+.... .++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.+++. +++.+...
T Consensus 23 ~~rp~-~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~ 101 (187)
T 2fhp_A 23 NTRPT-TDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKM 101 (187)
T ss_dssp SSCCC-CHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES
T ss_pred CcCcC-HHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEEC
Confidence 35676 677777776554 356899999999999999988876 4899999999999988752 35777774
Q ss_pred CCccchhhhhhc----cCCCCceeEEEeccccccCChhHHHHHH--HHHhcCCCcEEEEEecCCC
Q 024647 83 SPAMSIAELEQN----VAAQSTVDLVTIAQAMHWFDLPQFYNQV--KWVLKKPNGVIATWCYTVP 141 (265)
Q Consensus 83 ~~~~~~~d~~~~----~~~~~~~Dlv~~~~~~~~~~~~~~l~~~--~~~Lk~pgG~l~~~~~~~~ 141 (265)
+ +.+. +..+++||+|+++..++..+....++.+ .++|+ |||.+++......
T Consensus 102 d-------~~~~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~-~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 102 D-------ANRALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLT-NEAVIVCETDKTV 158 (187)
T ss_dssp C-------HHHHHHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEE-EEEEEEEEEETTC
T ss_pred c-------HHHHHHHHHhcCCCCCEEEECCCCCchhHHHHHHHHHHhcccC-CCCEEEEEeCCcc
Confidence 4 4332 2236789999999887766777888888 88899 9999998766543
No 101
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.59 E-value=1.7e-15 Score=126.42 Aligned_cols=99 Identities=14% Similarity=0.103 Sum_probs=80.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC---CC-------------------------------
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL---PN------------------------------- 76 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~---~~------------------------------- 76 (265)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.+++. .+
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 3557899999999999999998887 899999999999988652 11
Q ss_pred -c-eEEecCCccchhhhhhcc-CCC---CceeEEEeccccc----cC-ChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 77 -I-RYELTSPAMSIAELEQNV-AAQ---STVDLVTIAQAMH----WF-DLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 77 -~-~~~~~~~~~~~~d~~~~~-~~~---~~~Dlv~~~~~~~----~~-~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+ .+.. .|+.+.. .++ ++||+|++..++| +. ++..+++++.++|+ |||.|++...
T Consensus 135 ~v~~~~~-------~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~ 199 (265)
T 2i62_A 135 AIKQVLK-------CDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLK-PGGFLVMVDA 199 (265)
T ss_dssp HEEEEEE-------CCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE-EEEEEEEEEE
T ss_pred hheeEEE-------eeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCC-CCcEEEEEec
Confidence 5 6666 4444432 244 7899999999999 54 56789999999999 9999998663
No 102
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.59 E-value=8.8e-15 Score=118.11 Aligned_cols=107 Identities=19% Similarity=0.143 Sum_probs=86.0
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc------CCCceEEecCCccchhhh
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK------LPNIRYELTSPAMSIAEL 91 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~d~ 91 (265)
.+.+...+.... .++.+|||+|||+|..+..+++.+.+|+++|+|+.+++.+++ ..++.+.. +|+
T Consensus 62 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~-------~d~ 134 (210)
T 3lbf_A 62 QPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRH-------GDG 134 (210)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE-------SCG
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEE-------CCc
Confidence 345555555543 467899999999999999999998899999999999998875 24677777 555
Q ss_pred hhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 92 EQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 92 ~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
.+...++++||+|++..++|++.. ++.++|+ |||.+++....
T Consensus 135 ~~~~~~~~~~D~i~~~~~~~~~~~-----~~~~~L~-pgG~lv~~~~~ 176 (210)
T 3lbf_A 135 WQGWQARAPFDAIIVTAAPPEIPT-----ALMTQLD-EGGILVLPVGE 176 (210)
T ss_dssp GGCCGGGCCEEEEEESSBCSSCCT-----HHHHTEE-EEEEEEEEECS
T ss_pred ccCCccCCCccEEEEccchhhhhH-----HHHHhcc-cCcEEEEEEcC
Confidence 555445679999999999998843 6899999 99999987655
No 103
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.59 E-value=1.3e-15 Score=119.65 Aligned_cols=118 Identities=15% Similarity=0.045 Sum_probs=83.4
Q ss_pred hCCCCcHHHHHHHHhhC---CCCCeEEEEcCCcchhHHHHHhcC-CcEEEEcCCHHHHHHHHcC-------CCceEEecC
Q 024647 15 TRPNYPEELFKFITSKT---TNHELAWDVGTGSGQAAASLSGIF-ENVIGTETSPKQIEFATKL-------PNIRYELTS 83 (265)
Q Consensus 15 ~rp~y~~~l~~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~ 83 (265)
.||. ++.+.+.+.... .++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.+++. .++.+..
T Consensus 11 ~rp~-~~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~-- 87 (177)
T 2esr_A 11 TRPT-SDKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK-- 87 (177)
T ss_dssp --------CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC--
T ss_pred CCcC-HHHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEE--
Confidence 3554 444555554433 356899999999999999999885 4899999999999998752 2466766
Q ss_pred Cccchhhhhh-ccCCCCceeEEEeccccccCChhHHHHHHH--HHhcCCCcEEEEEecCCC
Q 024647 84 PAMSIAELEQ-NVAAQSTVDLVTIAQAMHWFDLPQFYNQVK--WVLKKPNGVIATWCYTVP 141 (265)
Q Consensus 84 ~~~~~~d~~~-~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~--~~Lk~pgG~l~~~~~~~~ 141 (265)
+|+.+ ++..+++||+|+++..++......+++.+. ++|+ |||.+++......
T Consensus 88 -----~d~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~-~gG~l~~~~~~~~ 142 (177)
T 2esr_A 88 -----MEAERAIDCLTGRFDLVFLDPPYAKETIVATIEALAAKNLLS-EQVMVVCETDKTV 142 (177)
T ss_dssp -----SCHHHHHHHBCSCEEEEEECCSSHHHHHHHHHHHHHHTTCEE-EEEEEEEEEETTC
T ss_pred -----CcHHHhHHhhcCCCCEEEECCCCCcchHHHHHHHHHhCCCcC-CCcEEEEEECCcc
Confidence 44444 232345799999987766555667788887 9999 9999998776543
No 104
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.58 E-value=1.3e-14 Score=117.58 Aligned_cols=99 Identities=19% Similarity=0.309 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHc------CCCceEEecCCccchhhhhhcc--CCCCce
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATK------LPNIRYELTSPAMSIAELEQNV--AAQSTV 101 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~d~~~~~--~~~~~~ 101 (265)
+++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.|++ ..++.+..+ |+..++ +++++|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~-------d~~~~~~~~~~~~~ 112 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWV-------DGSDLTDYFEDGEI 112 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEEC-------CSSCGGGTSCTTCC
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeC-------CHHHHHhhcCCCCC
Confidence 456889999999999999999886 479999999999998875 257888884 444444 567789
Q ss_pred eEEEeccccccCC---------hhHHHHHHHHHhcCCCcEEEEEec
Q 024647 102 DLVTIAQAMHWFD---------LPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 102 Dlv~~~~~~~~~~---------~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
|+|++++..+|.. ...+++++.++|+ |||.+++.+.
T Consensus 113 D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~ 157 (214)
T 1yzh_A 113 DRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILP-ENGEIHFKTD 157 (214)
T ss_dssp SEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSC-TTCEEEEEES
T ss_pred CEEEEECCCCccccchhhhccCCHHHHHHHHHHcC-CCcEEEEEeC
Confidence 9999998777653 2479999999999 9999988654
No 105
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.58 E-value=1.1e-14 Score=114.11 Aligned_cols=107 Identities=19% Similarity=0.169 Sum_probs=80.9
Q ss_pred HHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC------C-CceEEecCCccchhh
Q 024647 22 ELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL------P-NIRYELTSPAMSIAE 90 (265)
Q Consensus 22 ~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~------~-~~~~~~~~~~~~~~d 90 (265)
++...+.... .++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.+++. + ++ +...+.
T Consensus 12 ~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~------ 84 (178)
T 3hm2_A 12 HVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGA------ 84 (178)
T ss_dssp HHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCT------
T ss_pred HHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecch------
Confidence 3444444432 456799999999999999999884 5799999999999998752 2 55 555332
Q ss_pred hhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 91 LEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 91 ~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
.+.++...++||+|++...+|+ ..+++++.++|+ |||.+++....
T Consensus 85 ~~~~~~~~~~~D~i~~~~~~~~---~~~l~~~~~~L~-~gG~l~~~~~~ 129 (178)
T 3hm2_A 85 PRAFDDVPDNPDVIFIGGGLTA---PGVFAAAWKRLP-VGGRLVANAVT 129 (178)
T ss_dssp TGGGGGCCSCCSEEEECC-TTC---TTHHHHHHHTCC-TTCEEEEEECS
T ss_pred HhhhhccCCCCCEEEECCcccH---HHHHHHHHHhcC-CCCEEEEEeec
Confidence 1233333378999999998887 789999999999 99999987664
No 106
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.58 E-value=4.9e-15 Score=118.42 Aligned_cols=102 Identities=18% Similarity=0.148 Sum_probs=80.5
Q ss_pred hCCCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhcc-CCC
Q 024647 30 KTTNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNV-AAQ 98 (265)
Q Consensus 30 ~~~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~-~~~ 98 (265)
..+++.+|||+|||+|..+..+++.. .+|+|+|+|+.+++.|++. .++.+.. +|+.+++ ..+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~-------~d~~~~~~~~~ 91 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIK-------DGHQNMDKYID 91 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEEC-------SCGGGGGGTCC
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEE-------CCHHHHhhhcc
Confidence 45677899999999999999999874 4899999999999998752 4677777 5555553 455
Q ss_pred CceeEEEeccccc-----cC-----ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 99 STVDLVTIAQAMH-----WF-----DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 99 ~~~Dlv~~~~~~~-----~~-----~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
++||+|+++..+. +. +...+++++.++|+ |||.+++..+.
T Consensus 92 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-~gG~l~~~~~~ 141 (197)
T 3eey_A 92 CPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLV-TGGIITVVIYY 141 (197)
T ss_dssp SCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEE-EEEEEEEEECC
T ss_pred CCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCc-CCCEEEEEEcc
Confidence 7899999987551 11 23479999999999 99999987664
No 107
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.57 E-value=2.8e-15 Score=117.85 Aligned_cols=108 Identities=10% Similarity=0.144 Sum_probs=85.1
Q ss_pred HHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhc--CCcEEEEcCCHHHHHHHHcC---CCc--eEEecCCccchhhhhh
Q 024647 21 EELFKFITSKTTNHELAWDVGTGSGQAAASLSGI--FENVIGTETSPKQIEFATKL---PNI--RYELTSPAMSIAELEQ 93 (265)
Q Consensus 21 ~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~---~~~--~~~~~~~~~~~~d~~~ 93 (265)
++++..+..+.+++++|||+|||+|.++..++.. ..+|+|+|+|+.|++.+++. .++ ++.. .|...
T Consensus 37 d~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~-------~d~~~ 109 (200)
T 3fzg_A 37 NDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF-------LNKES 109 (200)
T ss_dssp HHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE-------ECCHH
T ss_pred HHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE-------ecccc
Confidence 6667777777888899999999999999999776 44899999999999998852 111 2222 22222
Q ss_pred ccCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 94 NVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 94 ~~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
. .+.++||+|++...+|.+ +.+..+.++.+.|+ |||.++-..
T Consensus 110 ~-~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~-pggvfISfp 152 (200)
T 3fzg_A 110 D-VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFH-TQNFVISFP 152 (200)
T ss_dssp H-HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCE-EEEEEEEEE
T ss_pred c-CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhC-CCCEEEEeC
Confidence 2 366889999999999999 55677779999999 999998655
No 108
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.57 E-value=1.9e-14 Score=121.31 Aligned_cols=96 Identities=16% Similarity=0.077 Sum_probs=77.0
Q ss_pred CCCCCeEEEEcCCcchhHHH-HHh-cCCcEEEEcCCHHHHHHHHcC------CCceEEecCCccchhhhhhccCCCCcee
Q 024647 31 TTNHELAWDVGTGSGQAAAS-LSG-IFENVIGTETSPKQIEFATKL------PNIRYELTSPAMSIAELEQNVAAQSTVD 102 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~-l~~-~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~d~~~~~~~~~~~D 102 (265)
.+++++|||||||+|.++.. +++ .+++|+|+|+|+.|++.|+++ .++++.+ +|+.+++ +++||
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~-------gDa~~l~--d~~FD 190 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVIT-------GDETVID--GLEFD 190 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEE-------SCGGGGG--GCCCS
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEE-------CchhhCC--CCCcC
Confidence 46789999999999876644 454 367899999999999998862 5677777 5556654 68999
Q ss_pred EEEeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 103 LVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 103 lv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+|++... .-+..++++++.++|| |||+|++...
T Consensus 191 vV~~~a~--~~d~~~~l~el~r~Lk-PGG~Lvv~~~ 223 (298)
T 3fpf_A 191 VLMVAAL--AEPKRRVFRNIHRYVD-TETRIIYRTY 223 (298)
T ss_dssp EEEECTT--CSCHHHHHHHHHHHCC-TTCEEEEEEC
T ss_pred EEEECCC--ccCHHHHHHHHHHHcC-CCcEEEEEcC
Confidence 9998654 2378899999999999 9999998553
No 109
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.56 E-value=1.1e-14 Score=120.04 Aligned_cols=100 Identities=18% Similarity=0.224 Sum_probs=77.2
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHc------------CCCceEEecCCccchhhhhh-cc-
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATK------------LPNIRYELTSPAMSIAELEQ-NV- 95 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~------------~~~~~~~~~~~~~~~~d~~~-~~- 95 (265)
.++.+|||||||+|.++..+++.++ +|+|+|+|+.|++.|++ ..|+.+..++ +.. ++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d-------~~~~l~~ 117 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSN-------AMKHLPN 117 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECC-------TTTCHHH
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECc-------HHHhhhh
Confidence 4557899999999999999998864 69999999999987752 3578888844 443 33
Q ss_pred -CCCCceeEEEeccccccCC---------hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 96 -AAQSTVDLVTIAQAMHWFD---------LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 96 -~~~~~~Dlv~~~~~~~~~~---------~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
++++++|.|++.+.-+|+. ...+++++.++|+ |||.|++.+..
T Consensus 118 ~~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~Lk-pGG~l~~~td~ 170 (235)
T 3ckk_A 118 FFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLR-VGGLVYTITDV 170 (235)
T ss_dssp HCCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEE-EEEEEEEEESC
T ss_pred hCCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCC-CCCEEEEEeCC
Confidence 5678999999877666652 1479999999999 99999986643
No 110
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.56 E-value=8.4e-15 Score=117.86 Aligned_cols=107 Identities=19% Similarity=0.156 Sum_probs=86.2
Q ss_pred HHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC------CCceEEecCCccchhhhhh
Q 024647 21 EELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL------PNIRYELTSPAMSIAELEQ 93 (265)
Q Consensus 21 ~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~d~~~ 93 (265)
..+.+.+....+++.+|||+|||+|.++..+++... +|+|+|+|+.|++.|++. .++.+.. +|+.+
T Consensus 48 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~-------~d~~~ 120 (205)
T 3grz_A 48 QLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQK-------TSLLA 120 (205)
T ss_dssp HHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEE-------SSTTT
T ss_pred HHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEe-------ccccc
Confidence 446666666667788999999999999999998755 899999999999988752 3477777 45444
Q ss_pred ccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 94 NVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 94 ~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
. .+++||+|+++..+|++ ..+++++.++|+ |||.+++..+.
T Consensus 121 ~--~~~~fD~i~~~~~~~~~--~~~l~~~~~~L~-~gG~l~~~~~~ 161 (205)
T 3grz_A 121 D--VDGKFDLIVANILAEIL--LDLIPQLDSHLN-EDGQVIFSGID 161 (205)
T ss_dssp T--CCSCEEEEEEESCHHHH--HHHGGGSGGGEE-EEEEEEEEEEE
T ss_pred c--CCCCceEEEECCcHHHH--HHHHHHHHHhcC-CCCEEEEEecC
Confidence 3 45789999999877763 688999999999 99999986554
No 111
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.55 E-value=1.1e-14 Score=119.12 Aligned_cols=105 Identities=19% Similarity=0.191 Sum_probs=81.2
Q ss_pred HhhCCCCCeEEEEcCC-cchhHHHHHhc-CCcEEEEcCCHHHHHHHHcC-----CCceEEecCCccchhhhhhccCCCCc
Q 024647 28 TSKTTNHELAWDVGTG-SGQAAASLSGI-FENVIGTETSPKQIEFATKL-----PNIRYELTSPAMSIAELEQNVAAQST 100 (265)
Q Consensus 28 ~~~~~~~~~vlDvGcG-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~ 100 (265)
....+++.+|||+||| +|.++..+++. ..+|+|+|+|+.+++.|++. .++.+..+++. .+. ++++++
T Consensus 50 ~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~----~~~--~~~~~~ 123 (230)
T 3evz_A 50 KTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGG----IIK--GVVEGT 123 (230)
T ss_dssp HTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSC----SST--TTCCSC
T ss_pred HhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCch----hhh--hcccCc
Confidence 3445678899999999 99999999998 68999999999999998752 25777774431 122 234589
Q ss_pred eeEEEeccccccCC--------------------hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 101 VDLVTIAQAMHWFD--------------------LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 101 ~Dlv~~~~~~~~~~--------------------~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
||+|+++..+++.+ ...+++++.++|+ |||.+++..+.
T Consensus 124 fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 181 (230)
T 3evz_A 124 FDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLN-PGGKVALYLPD 181 (230)
T ss_dssp EEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEE-EEEEEEEEEES
T ss_pred eeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhC-CCeEEEEEecc
Confidence 99999998776542 2678999999999 99999987654
No 112
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.55 E-value=1.5e-14 Score=121.58 Aligned_cols=95 Identities=17% Similarity=0.284 Sum_probs=73.8
Q ss_pred CCCeEEEEcCCcch----hHHHHHhc------CCcEEEEcCCHHHHHHHHcCC---------------------------
Q 024647 33 NHELAWDVGTGSGQ----AAASLSGI------FENVIGTETSPKQIEFATKLP--------------------------- 75 (265)
Q Consensus 33 ~~~~vlDvGcG~G~----~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~--------------------------- 75 (265)
++.+|||+|||||. ++..|++. ..+|+|+|+|+.|++.|++..
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 34689999999998 55556665 237999999999999998520
Q ss_pred ----------CceEEecCCccchhhhhhccCC-CCceeEEEeccccccCChh---HHHHHHHHHhcCCCcEEEE
Q 024647 76 ----------NIRYELTSPAMSIAELEQNVAA-QSTVDLVTIAQAMHWFDLP---QFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 76 ----------~~~~~~~~~~~~~~d~~~~~~~-~~~~Dlv~~~~~~~~~~~~---~~l~~~~~~Lk~pgG~l~~ 135 (265)
++.|.+ .|+.+.+++ .++||+|+|.++++|++++ ++++++.++|+ |||.|++
T Consensus 185 ~~~v~~~lr~~V~F~~-------~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~-pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSS-------VNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLK-PDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEE-------CCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEE-EEEEEEE
T ss_pred ceeechhhcccCeEEe-------cccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhC-CCcEEEE
Confidence 234444 555554333 5789999999999999654 79999999999 9999987
No 113
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.55 E-value=4.9e-15 Score=129.63 Aligned_cols=99 Identities=14% Similarity=0.150 Sum_probs=79.2
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-CC-cEEEEcCCHHHHHHHHc---------------CCCceEEecCCccchhhhhhc
Q 024647 32 TNHELAWDVGTGSGQAAASLSGI-FE-NVIGTETSPKQIEFATK---------------LPNIRYELTSPAMSIAELEQN 94 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~---------------~~~~~~~~~~~~~~~~d~~~~ 94 (265)
.++.+|||||||+|.++..++.. .. +|+|||+|+.|++.|++ ..++.+++ +|+.++
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~-------GD~~~l 244 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER-------GDFLSE 244 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE-------CCTTSH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE-------CcccCC
Confidence 57789999999999999999865 34 49999999999887763 14577777 555555
Q ss_pred cCCC--CceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 95 VAAQ--STVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 95 ~~~~--~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
++.+ ..+|+|+++..+++.+....+.++.++|| |||.|++...
T Consensus 245 p~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLK-PGGrIVssE~ 289 (438)
T 3uwp_A 245 EWRERIANTSVIFVNNFAFGPEVDHQLKERFANMK-EGGRIVSSKP 289 (438)
T ss_dssp HHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSC-TTCEEEESSC
T ss_pred ccccccCCccEEEEcccccCchHHHHHHHHHHcCC-CCcEEEEeec
Confidence 5432 46999999887776678889999999999 9999998544
No 114
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.55 E-value=2.1e-14 Score=117.62 Aligned_cols=107 Identities=21% Similarity=0.215 Sum_probs=84.9
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC----CCceEEecCCccchhhhhh
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL----PNIRYELTSPAMSIAELEQ 93 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~d~~~ 93 (265)
.+.+...+.... .++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++. .++.+.. +|+..
T Consensus 55 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~-------~d~~~ 127 (231)
T 1vbf_A 55 ALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLIL-------GDGTL 127 (231)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEE-------SCGGG
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcCCeEEEE-------CCccc
Confidence 455666665554 4668999999999999999999999999999999999998762 2677777 45554
Q ss_pred ccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 94 NVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 94 ~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
....+++||+|++..++|++. +++.++|+ |||.+++....
T Consensus 128 ~~~~~~~fD~v~~~~~~~~~~-----~~~~~~L~-pgG~l~~~~~~ 167 (231)
T 1vbf_A 128 GYEEEKPYDRVVVWATAPTLL-----CKPYEQLK-EGGIMILPIGV 167 (231)
T ss_dssp CCGGGCCEEEEEESSBBSSCC-----HHHHHTEE-EEEEEEEEECS
T ss_pred ccccCCCccEEEECCcHHHHH-----HHHHHHcC-CCcEEEEEEcC
Confidence 222457899999999998874 36899999 99999987654
No 115
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.55 E-value=1.3e-14 Score=116.30 Aligned_cols=108 Identities=12% Similarity=0.175 Sum_probs=80.7
Q ss_pred HHHHHHHHhh--CCCCCeEEEEcCCcchhHHHHHhcC----CcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhc
Q 024647 21 EELFKFITSK--TTNHELAWDVGTGSGQAAASLSGIF----ENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQN 94 (265)
Q Consensus 21 ~~l~~~l~~~--~~~~~~vlDvGcG~G~~~~~l~~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 94 (265)
-++.+.+..+ .+++.+|||+|||+|.++..++++. .+|+|+|+|+.+ ..+++.+.+.+. .+.
T Consensus 8 ~kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----~~~~v~~~~~d~-------~~~ 75 (201)
T 2plw_A 8 YKLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----PIPNVYFIQGEI-------GKD 75 (201)
T ss_dssp HHHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----CCTTCEEEECCT-------TTT
T ss_pred HHHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----CCCCceEEEccc-------cch
Confidence 3666655544 3567899999999999999999875 479999999942 235778877543 333
Q ss_pred c-------------------------CCCCceeEEEeccccccC-----Chh-------HHHHHHHHHhcCCCcEEEEEe
Q 024647 95 V-------------------------AAQSTVDLVTIAQAMHWF-----DLP-------QFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 95 ~-------------------------~~~~~~Dlv~~~~~~~~~-----~~~-------~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
+ +++++||+|+++.++|+. +.. .+++++.++|+ |||.+++..
T Consensus 76 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lk-pgG~lv~~~ 154 (201)
T 2plw_A 76 NMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYIN-IGGTYIVKM 154 (201)
T ss_dssp SSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred hhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHcc-CCCEEEEEE
Confidence 2 356789999999988874 222 37889999999 999999866
Q ss_pred cCCC
Q 024647 138 YTVP 141 (265)
Q Consensus 138 ~~~~ 141 (265)
+...
T Consensus 155 ~~~~ 158 (201)
T 2plw_A 155 YLGS 158 (201)
T ss_dssp ECST
T ss_pred eCCC
Confidence 5533
No 116
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.54 E-value=1.6e-14 Score=121.85 Aligned_cols=110 Identities=12% Similarity=0.090 Sum_probs=79.8
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHH-HcCCCceEE-ecCCccchhhhhhc
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFA-TKLPNIRYE-LTSPAMSIAELEQN 94 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a-~~~~~~~~~-~~~~~~~~~d~~~~ 94 (265)
..++.+.+.... .++.+|||+|||||.+|..++++++ +|+|+|+|+.|++.+ +..+.+... ..+++.. ..+.
T Consensus 70 ~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l--~~~~- 146 (291)
T 3hp7_A 70 GLKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYA--EPVD- 146 (291)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGC--CGGG-
T ss_pred HHHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCceec--chhh-
Confidence 346666665543 3567999999999999999999875 899999999999874 433444332 2222111 1122
Q ss_pred cCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEE
Q 024647 95 VAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATW 136 (265)
Q Consensus 95 ~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~ 136 (265)
++..+||+|++..++|+ ...++.++.++|+ |||.+++.
T Consensus 147 -l~~~~fD~v~~d~sf~s--l~~vL~e~~rvLk-pGG~lv~l 184 (291)
T 3hp7_A 147 -FTEGLPSFASIDVSFIS--LNLILPALAKILV-DGGQVVAL 184 (291)
T ss_dssp -CTTCCCSEEEECCSSSC--GGGTHHHHHHHSC-TTCEEEEE
T ss_pred -CCCCCCCEEEEEeeHhh--HHHHHHHHHHHcC-cCCEEEEE
Confidence 24446999999888774 4889999999999 99999875
No 117
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.54 E-value=4.1e-16 Score=128.70 Aligned_cols=94 Identities=14% Similarity=0.119 Sum_probs=80.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCCCceeEEE
Q 024647 33 NHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQSTVDLVT 105 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~ 105 (265)
++.+|||+|||+|..+..+++.+.+|+|+|+|+.|++.+++. .++.+.. +|+.+++ ++++||+|+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~-------~d~~~~~-~~~~~D~v~ 149 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFIC-------GDFLLLA-SFLKADVVF 149 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE-------SCHHHHG-GGCCCSEEE
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEE-------CChHHhc-ccCCCCEEE
Confidence 678999999999999999999999999999999999988752 3677777 6666665 567999999
Q ss_pred eccccccC-ChhHHHHHHHHHhcCCCcEEEE
Q 024647 106 IAQAMHWF-DLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 106 ~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
++..+|+. +....+.++.++|+ |||.+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~L~-pgG~~i~ 179 (241)
T 3gdh_A 150 LSPPWGGPDYATAETFDIRTMMS-PDGFEIF 179 (241)
T ss_dssp ECCCCSSGGGGGSSSBCTTTSCS-SCHHHHH
T ss_pred ECCCcCCcchhhhHHHHHHhhcC-CcceeHH
Confidence 99999988 55567888999999 9999665
No 118
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.54 E-value=1.6e-14 Score=117.36 Aligned_cols=108 Identities=17% Similarity=0.282 Sum_probs=81.9
Q ss_pred CcHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHH----Hc------CCCceEEecCCcc
Q 024647 19 YPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFA----TK------LPNIRYELTSPAM 86 (265)
Q Consensus 19 y~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a----~~------~~~~~~~~~~~~~ 86 (265)
+..+.++.+. ..++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.+ ++ .+++.+.+
T Consensus 15 ~~~~~~~~l~--~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~----- 87 (218)
T 3mq2_A 15 FSDAEFEQLR--SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLW----- 87 (218)
T ss_dssp CCHHHHHHHH--TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEE-----
T ss_pred cCHHHHHHhh--ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEe-----
Confidence 4556666654 3566789999999999999999985 5799999999988852 21 24778877
Q ss_pred chhhhhhccCCCCceeEEEecc---cc--ccC-ChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 87 SIAELEQNVAAQSTVDLVTIAQ---AM--HWF-DLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 87 ~~~d~~~~~~~~~~~Dlv~~~~---~~--~~~-~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
+|++++++++++ |.|.... .. |++ ++..+++++.++|| |||.+++..
T Consensus 88 --~d~~~l~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~ 140 (218)
T 3mq2_A 88 --ATAERLPPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCR-PGASFLVAL 140 (218)
T ss_dssp --CCSTTCCSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEE-EEEEEEEEE
T ss_pred --cchhhCCCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcC-CCcEEEEEe
Confidence 666777776666 7666433 33 255 77899999999999 999999843
No 119
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.53 E-value=1e-14 Score=113.84 Aligned_cols=99 Identities=13% Similarity=0.128 Sum_probs=79.5
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhcc--------CCCC
Q 024647 31 TTNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNV--------AAQS 99 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~~~~ 99 (265)
..++.+|||+|||+|.++..+++.. .+++++|+++ |++. .++.+...+ +.+.+ ++++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d-------~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGD-------FRDELVMKALLERVGDS 87 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESC-------TTSHHHHHHHHHHHTTC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEcc-------cccchhhhhhhccCCCC
Confidence 3567899999999999999999873 5899999999 7533 577787744 33333 4667
Q ss_pred ceeEEEeccccccC-Ch-----------hHHHHHHHHHhcCCCcEEEEEecCCCC
Q 024647 100 TVDLVTIAQAMHWF-DL-----------PQFYNQVKWVLKKPNGVIATWCYTVPE 142 (265)
Q Consensus 100 ~~Dlv~~~~~~~~~-~~-----------~~~l~~~~~~Lk~pgG~l~~~~~~~~~ 142 (265)
+||+|+++..+|++ +. ..+++++.++|+ |||.+++..+....
T Consensus 88 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLA-PGGSFVVKVFQGEG 141 (180)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEESSTT
T ss_pred ceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcC-CCcEEEEEEecCCc
Confidence 99999999999988 54 689999999999 99999987765444
No 120
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.53 E-value=5.4e-14 Score=115.25 Aligned_cols=119 Identities=23% Similarity=0.219 Sum_probs=83.3
Q ss_pred HhhhCCCCcHHHHHHHHhhC-----CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHH----HHHHcCCCceE
Q 024647 12 YAETRPNYPEELFKFITSKT-----TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQI----EFATKLPNIRY 79 (265)
Q Consensus 12 Y~~~rp~y~~~l~~~l~~~~-----~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~----~~a~~~~~~~~ 79 (265)
|+.+.|. ..++...+.... .++.+|||+|||+|..+..+++.. .+|+|+|+|+.|+ +.++++.|+.+
T Consensus 51 yr~w~~~-~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~ 129 (232)
T 3id6_C 51 YREWNAF-RSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFP 129 (232)
T ss_dssp EEECCTT-TCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEE
T ss_pred hhhhchH-HHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEE
Confidence 6666664 556666665433 477899999999999999999864 3799999999885 44555688988
Q ss_pred EecCCccchhhhhhccCCCCceeEEEeccccccCChhHH-HHHHHHHhcCCCcEEEEEec
Q 024647 80 ELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQF-YNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 80 ~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~-l~~~~~~Lk~pgG~l~~~~~ 138 (265)
...+++ .........++||+|+++.+. .+.... ...+.+.|| |||.|++...
T Consensus 130 i~~Da~----~~~~~~~~~~~~D~I~~d~a~--~~~~~il~~~~~~~Lk-pGG~lvisik 182 (232)
T 3id6_C 130 LLADAR----FPQSYKSVVENVDVLYVDIAQ--PDQTDIAIYNAKFFLK-VNGDMLLVIK 182 (232)
T ss_dssp EECCTT----CGGGTTTTCCCEEEEEECCCC--TTHHHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred EEcccc----cchhhhccccceEEEEecCCC--hhHHHHHHHHHHHhCC-CCeEEEEEEc
Confidence 885542 111111124689999998654 344444 455666999 9999998643
No 121
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.53 E-value=4.8e-14 Score=111.52 Aligned_cols=109 Identities=20% Similarity=0.299 Sum_probs=87.1
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhh
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAE 90 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d 90 (265)
++.+...+.... .++.+|||+|||+|..+..+++.+.+|+++|+|+.+++.+++. .++.+.. +|
T Consensus 18 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~-------~d 90 (192)
T 1l3i_A 18 AMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLME-------GD 90 (192)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE-------SC
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEe-------cC
Confidence 567777766543 4678999999999999999999888999999999999988752 4677777 44
Q ss_pred hhhccCCC-CceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 91 LEQNVAAQ-STVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 91 ~~~~~~~~-~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+... ++. ++||+|++...++ +...+++++.++|+ |||.+++..+.
T Consensus 91 ~~~~-~~~~~~~D~v~~~~~~~--~~~~~l~~~~~~l~-~gG~l~~~~~~ 136 (192)
T 1l3i_A 91 APEA-LCKIPDIDIAVVGGSGG--ELQEILRIIKDKLK-PGGRIIVTAIL 136 (192)
T ss_dssp HHHH-HTTSCCEEEEEESCCTT--CHHHHHHHHHHTEE-EEEEEEEEECB
T ss_pred HHHh-cccCCCCCEEEECCchH--HHHHHHHHHHHhcC-CCcEEEEEecC
Confidence 4441 222 5899999987765 45789999999999 99999987664
No 122
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.53 E-value=3.2e-14 Score=116.72 Aligned_cols=107 Identities=19% Similarity=0.191 Sum_probs=80.2
Q ss_pred hCCCCcHHHHHHH---HhhC--CCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHc----CCCceEEecC
Q 024647 15 TRPNYPEELFKFI---TSKT--TNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATK----LPNIRYELTS 83 (265)
Q Consensus 15 ~rp~y~~~l~~~l---~~~~--~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~----~~~~~~~~~~ 83 (265)
..|. ..+++..+ .... .++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.+++ ..++.+...
T Consensus 52 ~~~~-~~~~~~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~- 129 (230)
T 1fbn_A 52 WNPN-KSKLAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILG- 129 (230)
T ss_dssp CCTT-TCHHHHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEEC-
T ss_pred eCcc-hhHHHHHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEEC-
Confidence 3444 33444555 3332 466899999999999999999886 689999999999988764 356777774
Q ss_pred Cccchhhhhh----ccCCCCceeEEEeccccccC-Ch---hHHHHHHHHHhcCCCcEEEEE
Q 024647 84 PAMSIAELEQ----NVAAQSTVDLVTIAQAMHWF-DL---PQFYNQVKWVLKKPNGVIATW 136 (265)
Q Consensus 84 ~~~~~~d~~~----~~~~~~~~Dlv~~~~~~~~~-~~---~~~l~~~~~~Lk~pgG~l~~~ 136 (265)
|+.. .++. ++||+|+ |.+ ++ ..+++++.++|+ |||.+++.
T Consensus 130 ------d~~~~~~~~~~~-~~~D~v~-----~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~ 177 (230)
T 1fbn_A 130 ------DANKPQEYANIV-EKVDVIY-----EDVAQPNQAEILIKNAKWFLK-KGGYGMIA 177 (230)
T ss_dssp ------CTTCGGGGTTTS-CCEEEEE-----ECCCSTTHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred ------CCCCcccccccC-ccEEEEE-----EecCChhHHHHHHHHHHHhCC-CCcEEEEE
Confidence 4444 4444 7899999 334 55 678999999999 99999885
No 123
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.52 E-value=2.9e-14 Score=123.78 Aligned_cols=94 Identities=17% Similarity=0.173 Sum_probs=77.9
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCCCceeE
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQSTVDL 103 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dl 103 (265)
.++.+|||||||+|.++..+++.+. +|+|+|+|+ |++.|++. .++.+.. +|++++++++++||+
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~-------~d~~~~~~~~~~~D~ 134 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIK-------GKIEEVHLPVEKVDV 134 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEE-------SCTTTSCCSCSCEEE
T ss_pred cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEE-------eeHHHhcCCCCcEEE
Confidence 5678999999999999999999875 799999997 89888752 5677777 666777777789999
Q ss_pred EEecc---ccccC-ChhHHHHHHHHHhcCCCcEEE
Q 024647 104 VTIAQ---AMHWF-DLPQFYNQVKWVLKKPNGVIA 134 (265)
Q Consensus 104 v~~~~---~~~~~-~~~~~l~~~~~~Lk~pgG~l~ 134 (265)
|++.. .+++. +...++.++.++|| |||.++
T Consensus 135 Ivs~~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~li 168 (340)
T 2fyt_A 135 IISEWMGYFLLFESMLDSVLYAKNKYLA-KGGSVY 168 (340)
T ss_dssp EEECCCBTTBTTTCHHHHHHHHHHHHEE-EEEEEE
T ss_pred EEEcCchhhccCHHHHHHHHHHHHhhcC-CCcEEE
Confidence 99977 34444 46679999999999 999987
No 124
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.52 E-value=6.8e-15 Score=118.66 Aligned_cols=127 Identities=15% Similarity=0.035 Sum_probs=76.4
Q ss_pred HHHHHHHHhhC---CCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhcc
Q 024647 21 EELFKFITSKT---TNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNV 95 (265)
Q Consensus 21 ~~l~~~l~~~~---~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 95 (265)
+.+++++.... .++.+|||+|||+|.++..+++.++ +++|+|+|+.|++.+++... ....++++..+|+.+ +
T Consensus 15 ~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~--~~~~~~~~~~~d~~~-~ 91 (215)
T 4dzr_A 15 EVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAE--RFGAVVDWAAADGIE-W 91 (215)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHH-H
T ss_pred HHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHH--HhCCceEEEEcchHh-h
Confidence 45566666554 5678999999999999999999864 79999999999999985311 111144555588776 3
Q ss_pred CCC-----CceeEEEeccccccC-Ch--------------------------hHHHHHHHHHhcCCCcEEEEEecCCCCC
Q 024647 96 AAQ-----STVDLVTIAQAMHWF-DL--------------------------PQFYNQVKWVLKKPNGVIATWCYTVPEV 143 (265)
Q Consensus 96 ~~~-----~~~Dlv~~~~~~~~~-~~--------------------------~~~l~~~~~~Lk~pgG~l~~~~~~~~~~ 143 (265)
+++ ++||+|+++..++.. +. ..+++++.++|+ |||.+++.......
T Consensus 92 ~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~- 169 (215)
T 4dzr_A 92 LIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLA-RGRAGVFLEVGHNQ- 169 (215)
T ss_dssp HHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBC-SSSEEEEEECTTSC-
T ss_pred hhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhc-CCCeEEEEEECCcc-
Confidence 444 899999997655443 11 678889999999 99994443332222
Q ss_pred ChHHHHhhc
Q 024647 144 NVSVDAVFQ 152 (265)
Q Consensus 144 ~~~~~~~~~ 152 (265)
...+.+++.
T Consensus 170 ~~~~~~~l~ 178 (215)
T 4dzr_A 170 ADEVARLFA 178 (215)
T ss_dssp HHHHHHHTG
T ss_pred HHHHHHHHH
Confidence 344444444
No 125
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.52 E-value=5.8e-14 Score=113.69 Aligned_cols=106 Identities=17% Similarity=0.116 Sum_probs=82.6
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcC------CCceEEecCCccchh
Q 024647 21 EELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKL------PNIRYELTSPAMSIA 89 (265)
Q Consensus 21 ~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~ 89 (265)
+.+...+.... .++.+|||+|||+|..+..+++.+ .+|+++|+|+.+++.+++. .++.+.. +
T Consensus 63 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~-------~ 135 (215)
T 2yxe_A 63 IHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIV-------G 135 (215)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEE-------S
T ss_pred HHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEE-------C
Confidence 45555555443 466899999999999999999887 6899999999999988752 5677777 4
Q ss_pred hhhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 90 ELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 90 d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
|+......+++||+|++..++|++. +++.++|+ |||.+++....
T Consensus 136 d~~~~~~~~~~fD~v~~~~~~~~~~-----~~~~~~L~-pgG~lv~~~~~ 179 (215)
T 2yxe_A 136 DGTLGYEPLAPYDRIYTTAAGPKIP-----EPLIRQLK-DGGKLLMPVGR 179 (215)
T ss_dssp CGGGCCGGGCCEEEEEESSBBSSCC-----HHHHHTEE-EEEEEEEEESS
T ss_pred CcccCCCCCCCeeEEEECCchHHHH-----HHHHHHcC-CCcEEEEEECC
Confidence 4433222356899999999999875 48899999 99999986654
No 126
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.52 E-value=1e-13 Score=115.23 Aligned_cols=112 Identities=21% Similarity=0.313 Sum_probs=87.7
Q ss_pred hCCCCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhc---CCcEEEEcCCHHHHHHHHcC-------CCceEEec
Q 024647 15 TRPNYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGI---FENVIGTETSPKQIEFATKL-------PNIRYELT 82 (265)
Q Consensus 15 ~rp~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~ 82 (265)
..+.|+.... .+.... .++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.+++. .++.+..
T Consensus 77 ~~~~~~~~~~-~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~- 154 (258)
T 2pwy_A 77 ATPTYPKDAS-AMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHL- 154 (258)
T ss_dssp SCCCCHHHHH-HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEE-
T ss_pred cccccchHHH-HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEE-
Confidence 4455655543 343332 56789999999999999999988 46899999999999988752 4566766
Q ss_pred CCccchhhhhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 83 SPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 83 ~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|+.+.++++++||+|+++ +.++..+++++.++|+ |||.+++..+.
T Consensus 155 ------~d~~~~~~~~~~~D~v~~~----~~~~~~~l~~~~~~L~-~gG~l~~~~~~ 200 (258)
T 2pwy_A 155 ------GKLEEAELEEAAYDGVALD----LMEPWKVLEKAALALK-PDRFLVAYLPN 200 (258)
T ss_dssp ------SCGGGCCCCTTCEEEEEEE----SSCGGGGHHHHHHHEE-EEEEEEEEESC
T ss_pred ------CchhhcCCCCCCcCEEEEC----CcCHHHHHHHHHHhCC-CCCEEEEEeCC
Confidence 5666666677899999983 4477799999999999 99999987765
No 127
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.52 E-value=1.4e-14 Score=118.56 Aligned_cols=98 Identities=17% Similarity=0.159 Sum_probs=72.1
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhc--CCcEEEEcCC-HHHHHHH---Hc------CCCceEEecCCccchhhhhhccCC-
Q 024647 31 TTNHELAWDVGTGSGQAAASLSGI--FENVIGTETS-PKQIEFA---TK------LPNIRYELTSPAMSIAELEQNVAA- 97 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s-~~~~~~a---~~------~~~~~~~~~~~~~~~~d~~~~~~~- 97 (265)
..++.+|||||||+|.++..+++. ..+|+|+|+| +.|++.| ++ .+++.+.. +|++.++..
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~-------~d~~~l~~~~ 94 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVI-------AAAESLPFEL 94 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEEC-------CBTTBCCGGG
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEE-------cCHHHhhhhc
Confidence 456789999999999999999954 4579999999 7887776 43 25677777 555655421
Q ss_pred CCceeEEEecccc-----ccC-ChhHHHHHHHHHhcCCCcEEEEE
Q 024647 98 QSTVDLVTIAQAM-----HWF-DLPQFYNQVKWVLKKPNGVIATW 136 (265)
Q Consensus 98 ~~~~Dlv~~~~~~-----~~~-~~~~~l~~~~~~Lk~pgG~l~~~ 136 (265)
.+.+|.|.+++.+ |+. +...+++++.|+|| |||.+++.
T Consensus 95 ~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~Lk-pGG~l~i~ 138 (225)
T 3p2e_A 95 KNIADSISILFPWGTLLEYVIKPNRDILSNVADLAK-KEAHFEFV 138 (225)
T ss_dssp TTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEE-EEEEEEEE
T ss_pred cCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcC-CCcEEEEE
Confidence 2456666665532 222 45679999999999 99999883
No 128
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.52 E-value=7.2e-14 Score=118.74 Aligned_cols=112 Identities=15% Similarity=0.187 Sum_probs=79.3
Q ss_pred CcHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC-----------CCceEEecCCc
Q 024647 19 YPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL-----------PNIRYELTSPA 85 (265)
Q Consensus 19 y~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~~ 85 (265)
|.+.+........+++.+|||||||+|.+++.++++. .+|++||+|+.|++.|++. +++++..
T Consensus 69 Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~---- 144 (294)
T 3adn_A 69 YHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVI---- 144 (294)
T ss_dssp HHHHHHHHHHHHSTTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEEC----
T ss_pred HHHHHHHHHHhcCCCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEE----
Confidence 3333433333334667899999999999999999874 4799999999999998752 3566666
Q ss_pred cchhhhhhc-cCCCCceeEEEeccccccCC-----hhHHHHHHHHHhcCCCcEEEEEec
Q 024647 86 MSIAELEQN-VAAQSTVDLVTIAQAMHWFD-----LPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 86 ~~~~d~~~~-~~~~~~~Dlv~~~~~~~~~~-----~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+|+... ....++||+|++....++.. ...+++++.++|+ |||++++...
T Consensus 145 ---~D~~~~l~~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~Lk-pgG~lv~~~~ 199 (294)
T 3adn_A 145 ---DDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLN-PGGIFVAQNG 199 (294)
T ss_dssp ---SCSCC---CCCCCEEEEEECC----------CCHHHHHHHHHTEE-EEEEEEEEEE
T ss_pred ---ChHHHHHhhcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcC-CCCEEEEecC
Confidence 454332 23467899999976655432 1679999999999 9999998764
No 129
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.51 E-value=4.9e-14 Score=121.17 Aligned_cols=105 Identities=19% Similarity=0.181 Sum_probs=83.8
Q ss_pred HHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCc---EEEEcCCHHHHHHHHcC------CCceEEecCCccchhh
Q 024647 22 ELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFEN---VIGTETSPKQIEFATKL------PNIRYELTSPAMSIAE 90 (265)
Q Consensus 22 ~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~---v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~d 90 (265)
.+...+.... .++.+|||+|||+|.++..+++.+++ |+|+|+|+.+++.|++. .++.+.. +|
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~-------~d 134 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVC-------GD 134 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE-------SC
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEE-------CC
Confidence 5555655543 46789999999999999999988765 99999999999988752 4677777 55
Q ss_pred hhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 91 LEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 91 ~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+.+...++++||+|++..++|++. +++.++|| |||.+++....
T Consensus 135 ~~~~~~~~~~fD~Iv~~~~~~~~~-----~~~~~~Lk-pgG~lvi~~~~ 177 (317)
T 1dl5_A 135 GYYGVPEFSPYDVIFVTVGVDEVP-----ETWFTQLK-EGGRVIVPINL 177 (317)
T ss_dssp GGGCCGGGCCEEEEEECSBBSCCC-----HHHHHHEE-EEEEEEEEBCB
T ss_pred hhhccccCCCeEEEEEcCCHHHHH-----HHHHHhcC-CCcEEEEEECC
Confidence 555433457899999999999876 57889999 99999986543
No 130
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.50 E-value=1.1e-13 Score=108.72 Aligned_cols=108 Identities=16% Similarity=0.117 Sum_probs=86.5
Q ss_pred CCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC------CCceEEecCCccchh
Q 024647 18 NYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL------PNIRYELTSPAMSIA 89 (265)
Q Consensus 18 ~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~ 89 (265)
..++.+.+.+.... .++.+|||+|||+|.++..+++...+++|+|+|+.+++.+++. +++.+.. +
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~-------~ 90 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIK-------G 90 (183)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEE-------S
T ss_pred cCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEE-------C
Confidence 34677777776654 4667999999999999999999777899999999999988752 4677777 5
Q ss_pred hhhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 90 ELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 90 d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
|+.+ ++++++||+|+++.. -+...+++++.++ |||.+++..+.
T Consensus 91 d~~~-~~~~~~~D~i~~~~~---~~~~~~l~~~~~~---~gG~l~~~~~~ 133 (183)
T 2yxd_A 91 RAED-VLDKLEFNKAFIGGT---KNIEKIIEILDKK---KINHIVANTIV 133 (183)
T ss_dssp CHHH-HGGGCCCSEEEECSC---SCHHHHHHHHHHT---TCCEEEEEESC
T ss_pred Cccc-cccCCCCcEEEECCc---ccHHHHHHHHhhC---CCCEEEEEecc
Confidence 5555 445578999999887 5677899999998 59999987754
No 131
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.50 E-value=1.4e-13 Score=114.35 Aligned_cols=111 Identities=17% Similarity=0.245 Sum_probs=86.3
Q ss_pred hCCCCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhc---CCcEEEEcCCHHHHHHHHcC------CC-ceEEec
Q 024647 15 TRPNYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGI---FENVIGTETSPKQIEFATKL------PN-IRYELT 82 (265)
Q Consensus 15 ~rp~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~-~~~~~~ 82 (265)
..+.|+.... .+.... .++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|++. ++ +.+..
T Consensus 74 ~~~~~~~~~~-~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~- 151 (255)
T 3mb5_A 74 PQIVHPKDAA-LIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKL- 151 (255)
T ss_dssp SCCCCHHHHH-HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEEC-
T ss_pred cccccHhHHH-HHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEE-
Confidence 3445655554 444333 46789999999999999999988 46899999999999998752 34 77777
Q ss_pred CCccchhhhhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 83 SPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 83 ~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|+.+. +++++||+|+++ ..++..+++++.++|+ |||.+++..+.
T Consensus 152 ------~d~~~~-~~~~~~D~v~~~----~~~~~~~l~~~~~~L~-~gG~l~~~~~~ 196 (255)
T 3mb5_A 152 ------KDIYEG-IEEENVDHVILD----LPQPERVVEHAAKALK-PGGFFVAYTPC 196 (255)
T ss_dssp ------SCGGGC-CCCCSEEEEEEC----SSCGGGGHHHHHHHEE-EEEEEEEEESS
T ss_pred ------Cchhhc-cCCCCcCEEEEC----CCCHHHHHHHHHHHcC-CCCEEEEEECC
Confidence 555544 567789999984 3477789999999999 99999987754
No 132
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.50 E-value=7.4e-14 Score=116.36 Aligned_cols=107 Identities=18% Similarity=0.163 Sum_probs=84.2
Q ss_pred HHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC---CC--ceEEecCCccchhhhhhccC
Q 024647 22 ELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL---PN--IRYELTSPAMSIAELEQNVA 96 (265)
Q Consensus 22 ~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~~--~~~~~~~~~~~~~d~~~~~~ 96 (265)
..++++.....++.+|||+|||+|.++..+++.+++|+|+|+|+.+++.+++. .+ +.+.. +|+... +
T Consensus 109 ~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~-------~d~~~~-~ 180 (254)
T 2nxc_A 109 LALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLE-------GSLEAA-L 180 (254)
T ss_dssp HHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEE-------SCHHHH-G
T ss_pred HHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEE-------CChhhc-C
Confidence 34555655567778999999999999999999888999999999999988752 12 56666 444442 3
Q ss_pred CCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 97 AQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 97 ~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
++++||+|+++...|+ ...++.++.++|+ |||.+++....
T Consensus 181 ~~~~fD~Vv~n~~~~~--~~~~l~~~~~~Lk-pgG~lils~~~ 220 (254)
T 2nxc_A 181 PFGPFDLLVANLYAEL--HAALAPRYREALV-PGGRALLTGIL 220 (254)
T ss_dssp GGCCEEEEEEECCHHH--HHHHHHHHHHHEE-EEEEEEEEEEE
T ss_pred cCCCCCEEEECCcHHH--HHHHHHHHHHHcC-CCCEEEEEeec
Confidence 4578999999865553 4679999999999 99999986654
No 133
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.50 E-value=6.9e-14 Score=122.70 Aligned_cols=96 Identities=19% Similarity=0.223 Sum_probs=80.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
.+..+|||||||+|.++..++++++ +++++|+ +.+++.+++.+++++.. +|+.+ +.+.+ |+|++..+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~-------~d~~~-~~p~~--D~v~~~~v 270 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAFSGVEHLG-------GDMFD-GVPKG--DAIFIKWI 270 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEE-------CCTTT-CCCCC--SEEEEESC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhcCCCEEEe-------cCCCC-CCCCC--CEEEEech
Confidence 3457899999999999999999876 5899999 99999998778888888 55554 45543 99999999
Q ss_pred cccC-Ch--hHHHHHHHHHhcCCCcEEEEEecC
Q 024647 110 MHWF-DL--PQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 110 ~~~~-~~--~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|+. +. .+++++++++|+ |||.|++....
T Consensus 271 lh~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~ 302 (368)
T 3reo_A 271 CHDWSDEHCLKLLKNCYAALP-DHGKVIVAEYI 302 (368)
T ss_dssp GGGBCHHHHHHHHHHHHHHSC-TTCEEEEEECC
T ss_pred hhcCCHHHHHHHHHHHHHHcC-CCCEEEEEEec
Confidence 9866 43 378999999999 99999987664
No 134
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.50 E-value=3.8e-14 Score=124.49 Aligned_cols=96 Identities=23% Similarity=0.287 Sum_probs=80.7
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
++..+|||||||+|..+..++++++ +++++|+ +.|++.+++.+++.+.. +|+.+ +++. ||+|++..+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~v~~~~-------~d~~~-~~~~--~D~v~~~~~ 276 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPLSGIEHVG-------GDMFA-SVPQ--GDAMILKAV 276 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEE-------CCTTT-CCCC--EEEEEEESS
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhcCCCEEEe-------CCccc-CCCC--CCEEEEecc
Confidence 4567999999999999999999876 4778899 99999998777888888 55554 4443 999999999
Q ss_pred cccC-Chh--HHHHHHHHHhcCCCcEEEEEecC
Q 024647 110 MHWF-DLP--QFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 110 ~~~~-~~~--~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|++ |.. .+++++.++|+ |||.+++....
T Consensus 277 lh~~~d~~~~~~l~~~~~~L~-pgG~l~i~e~~ 308 (372)
T 1fp1_D 277 CHNWSDEKCIEFLSNCHKALS-PNGKVIIVEFI 308 (372)
T ss_dssp GGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHhcC-CCCEEEEEEec
Confidence 9987 555 89999999999 99999986543
No 135
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.50 E-value=6.7e-14 Score=121.93 Aligned_cols=95 Identities=21% Similarity=0.248 Sum_probs=78.2
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCCCceeE
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQSTVDL 103 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dl 103 (265)
.++.+|||||||+|.++..+++.+. +|+|+|+|+ |++.|++. .++.+.. +|++++++++++||+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~-------~d~~~~~~~~~~fD~ 136 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIK-------GKVEEVELPVEKVDI 136 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEE-------SCTTTCCCSSSCEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEE-------CcHHHccCCCCceEE
Confidence 4668999999999999999999865 899999995 99888752 2377777 667777778889999
Q ss_pred EEecccc---ccC-ChhHHHHHHHHHhcCCCcEEEE
Q 024647 104 VTIAQAM---HWF-DLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 104 v~~~~~~---~~~-~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
|++.... ++. +...++.++.++|| |||.++.
T Consensus 137 Iis~~~~~~l~~~~~~~~~l~~~~r~Lk-pgG~li~ 171 (349)
T 3q7e_A 137 IISEWMGYCLFYESMLNTVLHARDKWLA-PDGLIFP 171 (349)
T ss_dssp EEECCCBBTBTBTCCHHHHHHHHHHHEE-EEEEEES
T ss_pred EEEccccccccCchhHHHHHHHHHHhCC-CCCEEcc
Confidence 9997643 333 67789999999999 9999874
No 136
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.49 E-value=2.4e-14 Score=120.55 Aligned_cols=95 Identities=13% Similarity=-0.016 Sum_probs=73.6
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC--C------CceEE--ecCCccchhhhhhccCCCCce
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL--P------NIRYE--LTSPAMSIAELEQNVAAQSTV 101 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--~------~~~~~--~~~~~~~~~d~~~~~~~~~~~ 101 (265)
.++.+|||+|||+|.++..++++ .+|+|||+++ |+..+++. . ++.+. + +|+..++ +++|
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~-------~D~~~l~--~~~f 149 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSK-------VDVTKME--PFQA 149 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECS-------CCGGGCC--CCCC
T ss_pred CCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEecc-------CcHhhCC--CCCc
Confidence 46789999999999999999998 8999999999 65444321 2 56666 5 5666654 6799
Q ss_pred eEEEeccccccC-C----hh---HHHHHHHHHhcCCCc--EEEEEecC
Q 024647 102 DLVTIAQAMHWF-D----LP---QFYNQVKWVLKKPNG--VIATWCYT 139 (265)
Q Consensus 102 Dlv~~~~~~~~~-~----~~---~~l~~~~~~Lk~pgG--~l~~~~~~ 139 (265)
|+|+|..+ ++. + .. .+++++.++|+ ||| .|++-.+.
T Consensus 150 D~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~Lk-pGG~~~~v~~~~~ 195 (276)
T 2wa2_A 150 DTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLE-YNQGCGFCVKVLN 195 (276)
T ss_dssp SEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHH-HSTTCEEEEEESC
T ss_pred CEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhc-cCCCcEEEEEeCC
Confidence 99999877 443 2 22 37899999999 999 99886665
No 137
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.49 E-value=1e-13 Score=115.70 Aligned_cols=98 Identities=17% Similarity=0.162 Sum_probs=77.4
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhcc--CCCCcee
Q 024647 33 NHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNV--AAQSTVD 102 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~--~~~~~~D 102 (265)
++.+|||+|||+|.++..+++++. +|+|+|+++.+++.|++. .++.+.. +|+.++. +++++||
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~-------~D~~~~~~~~~~~~fD 121 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIE-------YDLKKITDLIPKERAD 121 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEEC-------SCGGGGGGTSCTTCEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEE-------CcHHHhhhhhccCCcc
Confidence 678999999999999999999877 899999999999998752 2477777 5555543 3478999
Q ss_pred EEEeccccccC---------------------ChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 103 LVTIAQAMHWF---------------------DLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 103 lv~~~~~~~~~---------------------~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+|+++..++.. +...+++.+.++|+ |||.+++...
T Consensus 122 ~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~ 177 (259)
T 3lpm_A 122 IVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLK-QGGKANFVHR 177 (259)
T ss_dssp EEEECCCC-----------------------HHHHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred EEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHcc-CCcEEEEEEc
Confidence 99997654322 23569999999999 9999998553
No 138
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.49 E-value=9.4e-14 Score=113.18 Aligned_cols=100 Identities=12% Similarity=0.149 Sum_probs=77.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc---CCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhh-ccC-C--
Q 024647 32 TNHELAWDVGTGSGQAAASLSGI---FENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQ-NVA-A-- 97 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~-~~~-~-- 97 (265)
.++.+|||+|||+|..+..+++. ..+|+++|+++.|++.|++. .++++..++ +.+ ++. .
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d-------~~~~l~~~~~~ 129 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGA-------SQDLIPQLKKK 129 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC-------HHHHGGGTTTT
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECC-------HHHHHHHHHHh
Confidence 35688999999999999999985 45899999999999998752 247787744 332 221 1
Q ss_pred --CCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 98 --QSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 98 --~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
.++||+|++....++. +...++..+ ++|+ |||++++.+...
T Consensus 130 ~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~Lk-pgG~lv~~~~~~ 173 (221)
T 3u81_A 130 YDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLR-KGTVLLADNVIV 173 (221)
T ss_dssp SCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCC-TTCEEEESCCCC
T ss_pred cCCCceEEEEEcCCcccchHHHHHHHhc-cccC-CCeEEEEeCCCC
Confidence 2689999998877665 555677777 9999 999999865543
No 139
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.49 E-value=1.1e-13 Score=121.56 Aligned_cols=119 Identities=14% Similarity=0.152 Sum_probs=86.3
Q ss_pred HHHHhhCC--CCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC---------CCceEEecCCccchhhh
Q 024647 25 KFITSKTT--NHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL---------PNIRYELTSPAMSIAEL 91 (265)
Q Consensus 25 ~~l~~~~~--~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~~~~~d~ 91 (265)
..+....+ ++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.+++. .++.+.. +|+
T Consensus 212 ~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~-------~D~ 284 (375)
T 4dcm_A 212 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMI-------NNA 284 (375)
T ss_dssp HHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEE-------CST
T ss_pred HHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEe-------chh
Confidence 34444443 34799999999999999999985 5899999999999988752 1356666 444
Q ss_pred hhccCCCCceeEEEeccccccC----C--hhHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhhc
Q 024647 92 EQNVAAQSTVDLVTIAQAMHWF----D--LPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVFQ 152 (265)
Q Consensus 92 ~~~~~~~~~~Dlv~~~~~~~~~----~--~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~~ 152 (265)
.+ ++++++||+|+++..+|+. + ...+++++.++|+ |||.+++...........+.+.|.
T Consensus 285 ~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~iv~n~~~~~~~~l~~~fg 349 (375)
T 4dcm_A 285 LS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLK-INGELYIVANRHLDYFHKLKKIFG 349 (375)
T ss_dssp TT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEE-EEEEEEEEEETTSCHHHHHHHHHS
T ss_pred hc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCC-CCcEEEEEEECCcCHHHHHHHhcC
Confidence 44 3467799999999998853 1 1368999999999 999999877654443344444443
No 140
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.49 E-value=1.4e-13 Score=116.26 Aligned_cols=104 Identities=13% Similarity=0.113 Sum_probs=83.2
Q ss_pred HHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCc-EEEEcCCHHHHHHHHcC------C-CceEEecCCccchhhhhhcc
Q 024647 24 FKFITSKTTNHELAWDVGTGSGQAAASLSGIFEN-VIGTETSPKQIEFATKL------P-NIRYELTSPAMSIAELEQNV 95 (265)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~-v~~vD~s~~~~~~a~~~------~-~~~~~~~~~~~~~~d~~~~~ 95 (265)
...+.....++.+|||+|||+|.++..+++.++. |+|+|+|+.|++.|++. . ++.+.. +|+.++.
T Consensus 116 ~~~l~~~~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~-------~D~~~~~ 188 (278)
T 2frn_A 116 RVRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYN-------MDNRDFP 188 (278)
T ss_dssp HHHHHHHCCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEEC-------SCTTTCC
T ss_pred HHHHHHhCCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEE-------CCHHHhc
Confidence 3445555677889999999999999999999875 99999999999988752 2 266666 6666665
Q ss_pred CCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 96 AAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 96 ~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
. +++||+|+++.. .+...++.++.++|+ |||.+++....
T Consensus 189 ~-~~~fD~Vi~~~p---~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 227 (278)
T 2frn_A 189 G-ENIADRILMGYV---VRTHEFIPKALSIAK-DGAIIHYHNTV 227 (278)
T ss_dssp C-CSCEEEEEECCC---SSGGGGHHHHHHHEE-EEEEEEEEEEE
T ss_pred c-cCCccEEEECCc---hhHHHHHHHHHHHCC-CCeEEEEEEee
Confidence 4 678999999643 245789999999999 99999986664
No 141
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.49 E-value=1.2e-13 Score=113.35 Aligned_cols=100 Identities=18% Similarity=0.087 Sum_probs=74.0
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHH----HHHcCCCceEEecCCccchhhhhhccCCCCceeEE
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIE----FATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLV 104 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~----~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv 104 (265)
.++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++ .++...++.+...++ .+...++..+++||+|
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~----~~~~~~~~~~~~~D~V 151 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDA----RHPHKYRMLIAMVDVI 151 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCT----TCGGGGGGGCCCEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEccc----CChhhhcccCCcEEEE
Confidence 467899999999999999999874 57999999987654 444457888887544 1211234456789999
Q ss_pred EeccccccCCh-hHHHHHHHHHhcCCCcEEEEEec
Q 024647 105 TIAQAMHWFDL-PQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 105 ~~~~~~~~~~~-~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
++... ..+. ..++.++.++|+ |||.+++...
T Consensus 152 ~~~~~--~~~~~~~~~~~~~~~Lk-pgG~l~i~~~ 183 (233)
T 2ipx_A 152 FADVA--QPDQTRIVALNAHTFLR-NGGHFVISIK 183 (233)
T ss_dssp EECCC--CTTHHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred EEcCC--CccHHHHHHHHHHHHcC-CCeEEEEEEc
Confidence 99655 2222 346889999999 9999998543
No 142
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.49 E-value=3e-14 Score=119.34 Aligned_cols=95 Identities=9% Similarity=-0.052 Sum_probs=73.0
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc--CC------CceEE--ecCCccchhhhhhccCCCCce
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK--LP------NIRYE--LTSPAMSIAELEQNVAAQSTV 101 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~--~~------~~~~~--~~~~~~~~~d~~~~~~~~~~~ 101 (265)
.++.+|||+|||+|.++..++++ .+|+|||+++ |+..+++ .. ++.+. + +|+..++ +++|
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~-------~D~~~l~--~~~f 141 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSR-------VDIHTLP--VERT 141 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECS-------CCTTTSC--CCCC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecc-------cCHhHCC--CCCC
Confidence 56789999999999999999988 8999999999 6443332 12 56666 5 5666653 6799
Q ss_pred eEEEeccccccC-Ch----h---HHHHHHHHHhcCCCc--EEEEEecC
Q 024647 102 DLVTIAQAMHWF-DL----P---QFYNQVKWVLKKPNG--VIATWCYT 139 (265)
Q Consensus 102 Dlv~~~~~~~~~-~~----~---~~l~~~~~~Lk~pgG--~l~~~~~~ 139 (265)
|+|+|..+ +.. ++ . .+++++.++|+ ||| .|++-.+.
T Consensus 142 D~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~Lk-pGG~~~fv~kv~~ 187 (265)
T 2oxt_A 142 DVIMCDVG-ESSPKWSVESERTIKILELLEKWKV-KNPSADFVVKVLC 187 (265)
T ss_dssp SEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHH-HCTTCEEEEEESC
T ss_pred cEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhc-cCCCeEEEEEeCC
Confidence 99999877 443 22 2 37899999999 999 99886665
No 143
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.49 E-value=1.4e-13 Score=120.99 Aligned_cols=103 Identities=21% Similarity=0.211 Sum_probs=82.0
Q ss_pred HHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhh
Q 024647 23 LFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELE 92 (265)
Q Consensus 23 l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~ 92 (265)
..+.+.... .++.+|||||||+|.++..++++++ +|+|+|+| .|++.|++. .++.++. +|++
T Consensus 51 ~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~-------~d~~ 122 (376)
T 3r0q_C 51 YFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIE-------GSVE 122 (376)
T ss_dssp HHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEE-------SCGG
T ss_pred HHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEE-------Cchh
Confidence 344444332 4678999999999999999999987 89999999 999988752 2367777 6777
Q ss_pred hccCCCCceeEEEeccccccC----ChhHHHHHHHHHhcCCCcEEEE
Q 024647 93 QNVAAQSTVDLVTIAQAMHWF----DLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 93 ~~~~~~~~~Dlv~~~~~~~~~----~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
+++++ ++||+|++....|.+ +...++.++.++|+ |||.+++
T Consensus 123 ~~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~Lk-pgG~li~ 167 (376)
T 3r0q_C 123 DISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLK-PTGVMYP 167 (376)
T ss_dssp GCCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEE-EEEEEES
T ss_pred hcCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCC-CCeEEEE
Confidence 77665 899999997766654 35679999999999 9999976
No 144
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.48 E-value=1.4e-13 Score=117.72 Aligned_cols=101 Identities=19% Similarity=0.180 Sum_probs=77.5
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC----------CCceEEecCCccchhhhhhccC--
Q 024647 31 TTNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL----------PNIRYELTSPAMSIAELEQNVA-- 96 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~d~~~~~~-- 96 (265)
.+++.+|||||||+|.+++.++++. .+|+++|+|+.+++.+++. +++++.. +|+.....
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~-------~D~~~~~~~~ 165 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV-------GDGLAFVRQT 165 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-------SCHHHHHHSS
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE-------CcHHHHHHhc
Confidence 3566899999999999999999874 4799999999999988752 3566766 55555432
Q ss_pred CCCceeEEEeccccccC-Ch----hHHHHHHHHHhcCCCcEEEEEecC
Q 024647 97 AQSTVDLVTIAQAMHWF-DL----PQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 97 ~~~~~Dlv~~~~~~~~~-~~----~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
++++||+|++....++. +. ..+++++.++|+ |||++++....
T Consensus 166 ~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~~ 212 (304)
T 3bwc_A 166 PDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILK-PDGICCNQGES 212 (304)
T ss_dssp CTTCEEEEEEECC---------CCHHHHHHHHHHEE-EEEEEEEEECC
T ss_pred cCCceeEEEECCCCccccchhhhHHHHHHHHHHhcC-CCcEEEEecCC
Confidence 46789999998766653 22 589999999999 99999987543
No 145
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.48 E-value=2.3e-13 Score=114.68 Aligned_cols=113 Identities=21% Similarity=0.285 Sum_probs=86.9
Q ss_pred CCCCcHHHHHHHHhh-CCCCCeEEEEcCCcchhHHHHHhc---CCcEEEEcCCHHHHHHHHcC---------CCceEEec
Q 024647 16 RPNYPEELFKFITSK-TTNHELAWDVGTGSGQAAASLSGI---FENVIGTETSPKQIEFATKL---------PNIRYELT 82 (265)
Q Consensus 16 rp~y~~~l~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~---------~~~~~~~~ 82 (265)
.+.||......+... ..++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|++. .++.+..
T Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~- 159 (280)
T 1i9g_A 81 QVIYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVV- 159 (280)
T ss_dssp CCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEEC-
T ss_pred eeecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEE-
Confidence 345555554333322 356789999999999999999986 46899999999999988742 3566666
Q ss_pred CCccchhhhhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 83 SPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 83 ~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
+|+.+.++++++||+|+++ ..++..+++++.++|+ |||.+++..+..
T Consensus 160 ------~d~~~~~~~~~~~D~v~~~----~~~~~~~l~~~~~~L~-pgG~l~~~~~~~ 206 (280)
T 1i9g_A 160 ------SDLADSELPDGSVDRAVLD----MLAPWEVLDAVSRLLV-AGGVLMVYVATV 206 (280)
T ss_dssp ------SCGGGCCCCTTCEEEEEEE----SSCGGGGHHHHHHHEE-EEEEEEEEESSH
T ss_pred ------CchHhcCCCCCceeEEEEC----CcCHHHHHHHHHHhCC-CCCEEEEEeCCH
Confidence 6666666667899999984 2377799999999999 999999987653
No 146
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.48 E-value=1.4e-13 Score=120.78 Aligned_cols=105 Identities=16% Similarity=0.170 Sum_probs=83.3
Q ss_pred HHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHc-------CCCceEEecCCccchhhhh
Q 024647 24 FKFITSKT--TNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATK-------LPNIRYELTSPAMSIAELE 92 (265)
Q Consensus 24 ~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~-------~~~~~~~~~~~~~~~~d~~ 92 (265)
...+.... .+..+|||||||+|.++..++++++ +++++|+ +.+++.+++ ..++.+.. +|+.
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~-------~d~~ 262 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILP-------GDFF 262 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEE-------CCTT
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEec-------cCCC
Confidence 33444433 4568999999999999999999875 6999999 999998875 24688888 4444
Q ss_pred hccCCCCceeEEEeccccccCChh---HHHHHHHHHhcCCCcEEEEEecC
Q 024647 93 QNVAAQSTVDLVTIAQAMHWFDLP---QFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 93 ~~~~~~~~~Dlv~~~~~~~~~~~~---~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
.+.+. +||+|++..++|+++.+ ++++++.++|+ |||.+++....
T Consensus 263 -~~~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~-pgG~l~i~e~~ 309 (369)
T 3gwz_A 263 -ETIPD-GADVYLIKHVLHDWDDDDVVRILRRIATAMK-PDSRLLVIDNL 309 (369)
T ss_dssp -TCCCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCC-TTCEEEEEEEB
T ss_pred -CCCCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcC-CCCEEEEEEec
Confidence 23444 89999999999988433 69999999999 99999986654
No 147
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.48 E-value=6.6e-14 Score=114.35 Aligned_cols=103 Identities=18% Similarity=0.160 Sum_probs=79.9
Q ss_pred HHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCC-------cEEEEcCCHHHHHHHHcC-----------CCceEEecCC
Q 024647 23 LFKFITSKTTNHELAWDVGTGSGQAAASLSGIFE-------NVIGTETSPKQIEFATKL-----------PNIRYELTSP 84 (265)
Q Consensus 23 l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~-------~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~ 84 (265)
+++.+.....++.+|||+|||+|..+..+++.+. +|+++|+++.+++.+++. .++.+..
T Consensus 70 ~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~--- 146 (227)
T 2pbf_A 70 SLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIH--- 146 (227)
T ss_dssp HHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEE---
T ss_pred HHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEE---
Confidence 3444433446778999999999999999998865 899999999999988752 3677777
Q ss_pred ccchhhhhhcc----CCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 85 AMSIAELEQNV----AAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 85 ~~~~~d~~~~~----~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+|+.... ...++||+|++...++++ ++++.++|+ |||.+++...
T Consensus 147 ----~d~~~~~~~~~~~~~~fD~I~~~~~~~~~-----~~~~~~~Lk-pgG~lv~~~~ 194 (227)
T 2pbf_A 147 ----KNIYQVNEEEKKELGLFDAIHVGASASEL-----PEILVDLLA-ENGKLIIPIE 194 (227)
T ss_dssp ----CCGGGCCHHHHHHHCCEEEEEECSBBSSC-----CHHHHHHEE-EEEEEEEEEE
T ss_pred ----CChHhcccccCccCCCcCEEEECCchHHH-----HHHHHHhcC-CCcEEEEEEc
Confidence 4444432 345689999999888764 578899999 9999988654
No 148
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.48 E-value=8.8e-14 Score=121.29 Aligned_cols=96 Identities=20% Similarity=0.266 Sum_probs=80.8
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
.+..+|||||||+|..+..++++++ +++++|+ +.|++.+++.+++.+.. +|+.+ +++ .||+|++..+
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~-------~d~~~-~~p--~~D~v~~~~~ 255 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGSNNLTYVG-------GDMFT-SIP--NADAVLLKYI 255 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCBTTEEEEE-------CCTTT-CCC--CCSEEEEESC
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccCCCcEEEe-------ccccC-CCC--CccEEEeehh
Confidence 4568999999999999999998865 6999999 99999998777788887 55543 344 3999999999
Q ss_pred cccC-Chh--HHHHHHHHHhcCC---CcEEEEEecC
Q 024647 110 MHWF-DLP--QFYNQVKWVLKKP---NGVIATWCYT 139 (265)
Q Consensus 110 ~~~~-~~~--~~l~~~~~~Lk~p---gG~l~~~~~~ 139 (265)
+|++ |.. .+++++.++|+ | ||.+++....
T Consensus 256 lh~~~d~~~~~~l~~~~~~L~-p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 256 LHNWTDKDCLRILKKCKEAVT-NDGKRGKVTIIDMV 290 (352)
T ss_dssp GGGSCHHHHHHHHHHHHHHHS-GGGCCCEEEEEECE
T ss_pred hccCCHHHHHHHHHHHHHhCC-CCCCCcEEEEEEee
Confidence 9977 555 89999999999 9 9999886654
No 149
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.48 E-value=1.2e-13 Score=114.84 Aligned_cols=95 Identities=15% Similarity=0.112 Sum_probs=77.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHc------CCCceEEecCCccchhhhhhccCC---CCce
Q 024647 33 NHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATK------LPNIRYELTSPAMSIAELEQNVAA---QSTV 101 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~d~~~~~~~---~~~~ 101 (265)
++.+|||||||+|..+..++..+ .+|+++|+|+.+++.+++ ..|+.+.. +|+++++.. .++|
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~-------~d~~~~~~~~~~~~~f 152 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALW-------GRAEVLAREAGHREAY 152 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEE-------CCHHHHTTSTTTTTCE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEE-------CcHHHhhcccccCCCc
Confidence 56799999999999999999874 479999999999998875 34678887 566666532 4789
Q ss_pred eEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 102 DLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 102 Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
|+|++... .+...+++.+.++|+ |||.+++...
T Consensus 153 D~I~s~a~---~~~~~ll~~~~~~Lk-pgG~l~~~~g 185 (249)
T 3g89_A 153 ARAVARAV---APLCVLSELLLPFLE-VGGAAVAMKG 185 (249)
T ss_dssp EEEEEESS---CCHHHHHHHHGGGEE-EEEEEEEEEC
T ss_pred eEEEECCc---CCHHHHHHHHHHHcC-CCeEEEEEeC
Confidence 99998643 266889999999999 9999987653
No 150
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.48 E-value=5.6e-14 Score=112.14 Aligned_cols=121 Identities=11% Similarity=0.115 Sum_probs=85.3
Q ss_pred HHHHHHHHhh--CCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhcc---
Q 024647 21 EELFKFITSK--TTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNV--- 95 (265)
Q Consensus 21 ~~l~~~l~~~--~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--- 95 (265)
-++.+.+... .+++.+|||+|||+|.++..++++..+|+|+|+++.. ..+++.+.++++ .+..
T Consensus 11 ~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~-----~~~~v~~~~~D~-------~~~~~~~ 78 (191)
T 3dou_A 11 FKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME-----EIAGVRFIRCDI-------FKETIFD 78 (191)
T ss_dssp HHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC-----CCTTCEEEECCT-------TSSSHHH
T ss_pred HHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc-----cCCCeEEEEccc-------cCHHHHH
Confidence 3666666655 3577899999999999999999998899999999852 346888888554 3221
Q ss_pred -----CC---CCceeEEEeccccccC-----Ch-------hHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhhcccc
Q 024647 96 -----AA---QSTVDLVTIAQAMHWF-----DL-------PQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVFQPFY 155 (265)
Q Consensus 96 -----~~---~~~~Dlv~~~~~~~~~-----~~-------~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~~~~~ 155 (265)
+. .++||+|+++.+.... |. ..+++.+.++|| |||.|++..+..+.. ..+...++..+
T Consensus 79 ~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~Lk-pGG~lv~k~~~~~~~-~~~~~~l~~~F 156 (191)
T 3dou_A 79 DIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLR-NGGNVLLKQFQGDMT-NDFIAIWRKNF 156 (191)
T ss_dssp HHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEECSTHH-HHHHHHHGGGE
T ss_pred HHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHcc-CCCEEEEEEcCCCCH-HHHHHHHHHhc
Confidence 11 1389999997643322 22 367889999999 999999877654432 34444444433
No 151
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.47 E-value=1e-13 Score=119.83 Aligned_cols=96 Identities=15% Similarity=0.089 Sum_probs=79.3
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCCCceeE
Q 024647 33 NHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQSTVDL 103 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dl 103 (265)
+..+|||||||+|.++..+++.++ +++++|+ +.+++.+++. .++.+.. +|+. .+.+. +||+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~-------~d~~-~~~p~-~~D~ 238 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVV-------GSFF-DPLPA-GAGG 238 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEE-------CCTT-SCCCC-SCSE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEec-------CCCC-CCCCC-CCcE
Confidence 357899999999999999998775 5999999 9999988752 5688888 4544 23344 8999
Q ss_pred EEeccccccC-Ch--hHHHHHHHHHhcCCCcEEEEEecC
Q 024647 104 VTIAQAMHWF-DL--PQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 104 v~~~~~~~~~-~~--~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
|++.+++|++ |. .++++++.++|+ |||.+++....
T Consensus 239 v~~~~vlh~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~ 276 (332)
T 3i53_A 239 YVLSAVLHDWDDLSAVAILRRCAEAAG-SGGVVLVIEAV 276 (332)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHT-TTCEEEEEECC
T ss_pred EEEehhhccCCHHHHHHHHHHHHHhcC-CCCEEEEEeec
Confidence 9999999987 43 689999999999 99999987664
No 152
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.47 E-value=2.1e-13 Score=117.88 Aligned_cols=98 Identities=15% Similarity=0.206 Sum_probs=80.2
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCCCcee
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQSTVD 102 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~D 102 (265)
.+..+|||+|||+|..+..+++.+ .+++++|++ .+++.+++. .++.+.. +|+.+.+++. .||
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~-------~d~~~~~~~~-~~D 234 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIA-------GSAFEVDYGN-DYD 234 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEE-------SCTTTSCCCS-CEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEe-------cccccCCCCC-CCc
Confidence 456899999999999999999885 479999999 999988752 2477777 5555555444 499
Q ss_pred EEEeccccccCC-h--hHHHHHHHHHhcCCCcEEEEEecC
Q 024647 103 LVTIAQAMHWFD-L--PQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 103 lv~~~~~~~~~~-~--~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|++..++|+++ . ..+++++.++|+ |||.+++....
T Consensus 235 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~ 273 (335)
T 2r3s_A 235 LVLLPNFLHHFDVATCEQLLRKIKTALA-VEGKVIVFDFI 273 (335)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEECC
T ss_pred EEEEcchhccCCHHHHHHHHHHHHHhCC-CCcEEEEEeec
Confidence 999999999873 3 489999999999 99999887665
No 153
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.47 E-value=1.4e-13 Score=112.90 Aligned_cols=114 Identities=16% Similarity=0.169 Sum_probs=86.5
Q ss_pred hCCCCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC-------CCceEEecC
Q 024647 15 TRPNYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL-------PNIRYELTS 83 (265)
Q Consensus 15 ~rp~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~ 83 (265)
..|...+.....+.... .++.+|||+|||+|..+..+++.. .+|+++|+++.+++.|++. .++.+...+
T Consensus 34 ~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 113 (233)
T 2gpy_A 34 QVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGD 113 (233)
T ss_dssp TCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC
T ss_pred CCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC
Confidence 45555666666655443 356799999999999999999884 6899999999999988752 357777744
Q ss_pred Cccchhhhhhc-cC--CCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 84 PAMSIAELEQN-VA--AQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 84 ~~~~~~d~~~~-~~--~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+... +. .+++||+|++....+ +...+++++.++|+ |||.+++.+.
T Consensus 114 -------~~~~~~~~~~~~~fD~I~~~~~~~--~~~~~l~~~~~~L~-pgG~lv~~~~ 161 (233)
T 2gpy_A 114 -------ALQLGEKLELYPLFDVLFIDAAKG--QYRRFFDMYSPMVR-PGGLILSDNV 161 (233)
T ss_dssp -------GGGSHHHHTTSCCEEEEEEEGGGS--CHHHHHHHHGGGEE-EEEEEEEETT
T ss_pred -------HHHHHHhcccCCCccEEEECCCHH--HHHHHHHHHHHHcC-CCeEEEEEcC
Confidence 3332 21 156899999977644 67889999999999 9999998643
No 154
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.47 E-value=2.2e-13 Score=119.33 Aligned_cols=96 Identities=16% Similarity=0.223 Sum_probs=80.6
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
.+..+|||||||+|..+..++++++ +++++|+ +.+++.+++.+++.+.. +|+.+ +.+.+ |+|++..+
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~-------~D~~~-~~p~~--D~v~~~~v 268 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQFPGVTHVG-------GDMFK-EVPSG--DTILMKWI 268 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEE-------CCTTT-CCCCC--SEEEEESC
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhcCCeEEEe-------CCcCC-CCCCC--CEEEehHH
Confidence 3567999999999999999999876 5899999 99999998778888888 56555 55544 99999999
Q ss_pred cccC-C--hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 110 MHWF-D--LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 110 ~~~~-~--~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|.. + ...++++++++|+ |||.|++....
T Consensus 269 lh~~~d~~~~~~L~~~~~~L~-pgG~l~i~e~~ 300 (364)
T 3p9c_A 269 LHDWSDQHCATLLKNCYDALP-AHGKVVLVQCI 300 (364)
T ss_dssp GGGSCHHHHHHHHHHHHHHSC-TTCEEEEEECC
T ss_pred hccCCHHHHHHHHHHHHHHcC-CCCEEEEEEec
Confidence 9866 3 3478999999999 99999987664
No 155
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.47 E-value=2.1e-13 Score=114.84 Aligned_cols=110 Identities=17% Similarity=0.165 Sum_probs=84.2
Q ss_pred cHHHHHHHHhhC-CCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC------CCceEEecCCccchhh
Q 024647 20 PEELFKFITSKT-TNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL------PNIRYELTSPAMSIAE 90 (265)
Q Consensus 20 ~~~l~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~d 90 (265)
.+.+++.+.... .++.+|||+|||+|..+..+++.. .+|+|+|+|+.+++.+++. +++.+.. +|
T Consensus 95 te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~-------~d 167 (276)
T 2b3t_A 95 TECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQ-------SD 167 (276)
T ss_dssp HHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEEC-------CS
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEE-------cc
Confidence 566777777665 456799999999999999999764 5799999999999988752 4677777 44
Q ss_pred hhhccCCCCceeEEEeccccccC--------------------------ChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 91 LEQNVAAQSTVDLVTIAQAMHWF--------------------------DLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 91 ~~~~~~~~~~~Dlv~~~~~~~~~--------------------------~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+... .++++||+|+++...++. +...+++++.++|+ |||.+++...
T Consensus 168 ~~~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lk-pgG~l~~~~~ 239 (276)
T 2b3t_A 168 WFSA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALV-SGGFLLLEHG 239 (276)
T ss_dssp TTGG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEE-EEEEEEEECC
T ss_pred hhhh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcC-CCCEEEEEEC
Confidence 4443 346789999998544332 12568899999999 9999998643
No 156
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.47 E-value=2.6e-13 Score=110.81 Aligned_cols=117 Identities=22% Similarity=0.177 Sum_probs=81.5
Q ss_pred HhhhCCCCcHHHHHHHHh---h--CCCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHc----CCCceE
Q 024647 12 YAETRPNYPEELFKFITS---K--TTNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATK----LPNIRY 79 (265)
Q Consensus 12 Y~~~rp~y~~~l~~~l~~---~--~~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~----~~~~~~ 79 (265)
|...+|.++ ++...+.. . ..++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.+++ .+++.+
T Consensus 48 ~~~~~p~~~-~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~ 126 (227)
T 1g8a_A 48 YRIWNPNRS-KLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVP 126 (227)
T ss_dssp EEECCTTTC-HHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEE
T ss_pred EEEeCCCch-hHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEE
Confidence 333477654 44455532 2 2466899999999999999999873 589999999988877653 357888
Q ss_pred EecCCccchhhhhhccCCCCceeEEEeccccccCChh-HHHHHHHHHhcCCCcEEEEE
Q 024647 80 ELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFDLP-QFYNQVKWVLKKPNGVIATW 136 (265)
Q Consensus 80 ~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~~~-~~l~~~~~~Lk~pgG~l~~~ 136 (265)
...++. +........++||+|++... ..+.. .++.++.++|+ |||.+++.
T Consensus 127 ~~~d~~----~~~~~~~~~~~~D~v~~~~~--~~~~~~~~l~~~~~~Lk-pgG~l~~~ 177 (227)
T 1g8a_A 127 ILGDAT----KPEEYRALVPKVDVIFEDVA--QPTQAKILIDNAEVYLK-RGGYGMIA 177 (227)
T ss_dssp EECCTT----CGGGGTTTCCCEEEEEECCC--STTHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred EEccCC----CcchhhcccCCceEEEECCC--CHhHHHHHHHHHHHhcC-CCCEEEEE
Confidence 875441 11111112358999998755 22333 45999999999 99999876
No 157
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.46 E-value=2.3e-13 Score=116.16 Aligned_cols=114 Identities=11% Similarity=0.167 Sum_probs=85.2
Q ss_pred CCcHHHHHHHHh---hCCC--CCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC------CCceEEecCC
Q 024647 18 NYPEELFKFITS---KTTN--HELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL------PNIRYELTSP 84 (265)
Q Consensus 18 ~y~~~l~~~l~~---~~~~--~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~ 84 (265)
.|.+.++..+.. ..+. +.+|||||||+|.+++.+++++ .+|++||+++.|++.|++. ++++++.
T Consensus 69 ~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~--- 145 (317)
T 3gjy_A 69 EYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRV--- 145 (317)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEE---
T ss_pred HHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEE---
Confidence 355666666654 2333 3489999999999999999854 4799999999999999862 3566666
Q ss_pred ccchhhhhhc--cCCCCceeEEEeccccccC-----ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 85 AMSIAELEQN--VAAQSTVDLVTIAQAMHWF-----DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 85 ~~~~~d~~~~--~~~~~~~Dlv~~~~~~~~~-----~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|+..+ ..++++||+|++....++. ....+++++.++|+ |||++++....
T Consensus 146 ----~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~Lk-pgGvlv~~~~~ 202 (317)
T 3gjy_A 146 ----DDARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLA-PGGLYVANCGD 202 (317)
T ss_dssp ----SCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEE-EEEEEEEEEEE
T ss_pred ----CcHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcC-CCcEEEEEecC
Confidence 554443 2346789999997655442 23679999999999 99999987654
No 158
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.46 E-value=2.6e-13 Score=110.70 Aligned_cols=103 Identities=17% Similarity=0.230 Sum_probs=78.8
Q ss_pred HHHHHhhCCCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHc-----------CCCceEEecCCccchh
Q 024647 24 FKFITSKTTNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATK-----------LPNIRYELTSPAMSIA 89 (265)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~-----------~~~~~~~~~~~~~~~~ 89 (265)
++.+.....++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.+++ ..++.+.. +
T Consensus 68 l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~-------~ 140 (226)
T 1i1n_A 68 LELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVV-------G 140 (226)
T ss_dssp HHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEE-------S
T ss_pred HHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEE-------C
Confidence 33333334567899999999999999999874 489999999999998864 13677777 4
Q ss_pred hhhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 90 ELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 90 d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
|+.......++||+|++...++.+ ++++.++|+ |||.+++....
T Consensus 141 d~~~~~~~~~~fD~i~~~~~~~~~-----~~~~~~~Lk-pgG~lv~~~~~ 184 (226)
T 1i1n_A 141 DGRMGYAEEAPYDAIHVGAAAPVV-----PQALIDQLK-PGGRLILPVGP 184 (226)
T ss_dssp CGGGCCGGGCCEEEEEECSBBSSC-----CHHHHHTEE-EEEEEEEEESC
T ss_pred CcccCcccCCCcCEEEECCchHHH-----HHHHHHhcC-CCcEEEEEEec
Confidence 444444446789999998877643 468899999 99999986553
No 159
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.46 E-value=2.8e-13 Score=111.29 Aligned_cols=113 Identities=18% Similarity=0.195 Sum_probs=84.8
Q ss_pred hCCCCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhc--CCcEEEEcCCHHHHHHHHcC-------CCceEEecC
Q 024647 15 TRPNYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGI--FENVIGTETSPKQIEFATKL-------PNIRYELTS 83 (265)
Q Consensus 15 ~rp~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~ 83 (265)
..|...+.....+.... .++.+|||+|||+|..+..+++. ..+|+++|+++.+++.|++. .++.+..++
T Consensus 51 ~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 130 (232)
T 3ntv_A 51 EVPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGN 130 (232)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC
T ss_pred CCCCcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC
Confidence 44555566665555433 46689999999999999999984 46899999999999998752 368888844
Q ss_pred Cccchhhhhhc-c-CCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 84 PAMSIAELEQN-V-AAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 84 ~~~~~~d~~~~-~-~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
+.+. + ..+++||+|++... .-+...+++++.++|+ |||.|++.+
T Consensus 131 -------~~~~~~~~~~~~fD~V~~~~~--~~~~~~~l~~~~~~Lk-pgG~lv~d~ 176 (232)
T 3ntv_A 131 -------ALEQFENVNDKVYDMIFIDAA--KAQSKKFFEIYTPLLK-HQGLVITDN 176 (232)
T ss_dssp -------GGGCHHHHTTSCEEEEEEETT--SSSHHHHHHHHGGGEE-EEEEEEEEC
T ss_pred -------HHHHHHhhccCCccEEEEcCc--HHHHHHHHHHHHHhcC-CCeEEEEee
Confidence 4332 2 22578999997643 2256789999999999 999998833
No 160
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.46 E-value=2e-13 Score=119.59 Aligned_cols=98 Identities=17% Similarity=0.155 Sum_probs=79.7
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhc--cCCCCc
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQN--VAAQST 100 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~--~~~~~~ 100 (265)
....+|||||||+|.++..++++++ +++++|+ +.|++.|++. .++.+.. +|+.+. +++ ++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~-------~d~~~~~~~~p-~~ 248 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHG-------ANLLDRDVPFP-TG 248 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEE-------CCCCSSSCCCC-CC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEE-------ccccccCCCCC-CC
Confidence 3557899999999999999999765 6999999 9999988752 3577777 555543 344 68
Q ss_pred eeEEEeccccccC-Ch--hHHHHHHHHHhcCCCcEEEEEecC
Q 024647 101 VDLVTIAQAMHWF-DL--PQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 101 ~Dlv~~~~~~~~~-~~--~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
||+|++..++|.+ +. ..+++++.++|+ |||.|++....
T Consensus 249 ~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~ 289 (363)
T 3dp7_A 249 FDAVWMSQFLDCFSEEEVISILTRVAQSIG-KDSKVYIMETL 289 (363)
T ss_dssp CSEEEEESCSTTSCHHHHHHHHHHHHHHCC-TTCEEEEEECC
T ss_pred cCEEEEechhhhCCHHHHHHHHHHHHHhcC-CCcEEEEEeec
Confidence 9999999999876 33 378999999999 99999987654
No 161
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.46 E-value=6.8e-14 Score=114.42 Aligned_cols=102 Identities=12% Similarity=0.130 Sum_probs=78.3
Q ss_pred HHHHHhhCCCCCeEEEEcCCcchhHHHHHhcC--------CcEEEEcCCHHHHHHHHc-----------CCCceEEecCC
Q 024647 24 FKFITSKTTNHELAWDVGTGSGQAAASLSGIF--------ENVIGTETSPKQIEFATK-----------LPNIRYELTSP 84 (265)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~--------~~v~~vD~s~~~~~~a~~-----------~~~~~~~~~~~ 84 (265)
++.+.....++.+|||+|||+|..+..+++.. .+|+++|+++.+++.+++ ..++.+..
T Consensus 75 ~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~--- 151 (227)
T 1r18_A 75 LEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE--- 151 (227)
T ss_dssp HHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE---
T ss_pred HHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE---
Confidence 33333334567899999999999999998853 389999999999998875 24677777
Q ss_pred ccchhhhhhccCCC-CceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 85 AMSIAELEQNVAAQ-STVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 85 ~~~~~d~~~~~~~~-~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|+.+ +++. ++||+|++...+|++. +++.+.|+ |||.+++....
T Consensus 152 ----~d~~~-~~~~~~~fD~I~~~~~~~~~~-----~~~~~~Lk-pgG~lvi~~~~ 196 (227)
T 1r18_A 152 ----GDGRK-GYPPNAPYNAIHVGAAAPDTP-----TELINQLA-SGGRLIVPVGP 196 (227)
T ss_dssp ----SCGGG-CCGGGCSEEEEEECSCBSSCC-----HHHHHTEE-EEEEEEEEESC
T ss_pred ----CCccc-CCCcCCCccEEEECCchHHHH-----HHHHHHhc-CCCEEEEEEec
Confidence 44444 2333 7899999999888754 78899999 99999986543
No 162
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.46 E-value=3.1e-13 Score=113.87 Aligned_cols=101 Identities=17% Similarity=0.220 Sum_probs=78.7
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC----------CCceEEecCCccchhhhhh-ccCC
Q 024647 31 TTNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL----------PNIRYELTSPAMSIAELEQ-NVAA 97 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~d~~~-~~~~ 97 (265)
.+.+.+|||||||+|.+++.++++. .+|++||+++.+++.|++. +++++..+++ .. ++..
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~-------~~~l~~~ 145 (275)
T 1iy9_A 73 HPNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDG-------FMHIAKS 145 (275)
T ss_dssp SSSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCS-------HHHHHTC
T ss_pred CCCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcH-------HHHHhhC
Confidence 3567899999999999999999873 4799999999999998751 3567777443 33 2334
Q ss_pred CCceeEEEeccccccCC-----hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 98 QSTVDLVTIAQAMHWFD-----LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 98 ~~~~Dlv~~~~~~~~~~-----~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+++||+|++....++.. ...+++++.++|+ |||++++....
T Consensus 146 ~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~-pgG~lv~~~~~ 191 (275)
T 1iy9_A 146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALK-EDGIFVAQTDN 191 (275)
T ss_dssp CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEE-EEEEEEEECCC
T ss_pred CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcC-CCcEEEEEcCC
Confidence 57899999977655432 2679999999999 99999987543
No 163
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.46 E-value=1.2e-13 Score=120.01 Aligned_cols=119 Identities=12% Similarity=0.086 Sum_probs=87.3
Q ss_pred HHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcC-----CCceEEecCCccchhhhhh
Q 024647 23 LFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKL-----PNIRYELTSPAMSIAELEQ 93 (265)
Q Consensus 23 l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~d~~~ 93 (265)
..+.+.... .++.+|||+|||+|.++..+++.++ +|+++|+|+.|++.+++. .+..+.. +|+..
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~-------~d~~~ 256 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFA-------SNVFS 256 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEE-------CSTTT
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEE-------ccccc
Confidence 344444443 2457899999999999999999874 799999999999988752 2244544 44443
Q ss_pred ccCCCCceeEEEeccccccC------ChhHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhh
Q 024647 94 NVAAQSTVDLVTIAQAMHWF------DLPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVF 151 (265)
Q Consensus 94 ~~~~~~~~Dlv~~~~~~~~~------~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~ 151 (265)
. .+++||+|+++..+|+. +...+++++.++|+ |||.+++...........+.+.+
T Consensus 257 ~--~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~l~~~f 317 (343)
T 2pjd_A 257 E--VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLN-SGGELRIVANAFLPYPDVLDETF 317 (343)
T ss_dssp T--CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEE-EEEEEEEEEETTSSHHHHHHHHH
T ss_pred c--ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCC-CCcEEEEEEcCCCCcHHHHHHhc
Confidence 3 36789999999999862 35689999999999 99999987665333333444443
No 164
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.46 E-value=2.7e-13 Score=112.51 Aligned_cols=114 Identities=23% Similarity=0.296 Sum_probs=81.5
Q ss_pred CCCcHH----HHHHHHhhCC--CCCeEEEEcCCcchhHHHHHhc----CCcEEEEcCCHHHHHHHHcC---C---C----
Q 024647 17 PNYPEE----LFKFITSKTT--NHELAWDVGTGSGQAAASLSGI----FENVIGTETSPKQIEFATKL---P---N---- 76 (265)
Q Consensus 17 p~y~~~----l~~~l~~~~~--~~~~vlDvGcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~---~---~---- 76 (265)
|.++.. +++.+..... ++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|++. . +
T Consensus 29 ~~~~~~la~~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~ 108 (250)
T 1o9g_A 29 PAFPVRLATEIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTAR 108 (250)
T ss_dssp CCCCHHHHHHHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcccccc
Confidence 444444 4444444432 4578999999999999999887 35799999999999998741 1 1
Q ss_pred -------------------------ce-------------EEecCCccchhhhhhccC-----CCCceeEEEeccccccC
Q 024647 77 -------------------------IR-------------YELTSPAMSIAELEQNVA-----AQSTVDLVTIAQAMHWF 113 (265)
Q Consensus 77 -------------------------~~-------------~~~~~~~~~~~d~~~~~~-----~~~~~Dlv~~~~~~~~~ 113 (265)
+. +.. +|+.+... ...+||+|+++..++..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-------~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~ 181 (250)
T 1o9g_A 109 ELERREQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRT-------ADVFDPRALSAVLAGSAPDVVLTDLPYGER 181 (250)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEE-------CCTTCGGGHHHHHTTCCCSEEEEECCGGGS
T ss_pred chhhhhhhhhcccccchhhhhhhhhhhhhccccccccccceee-------cccccccccccccCCCCceEEEeCCCeecc
Confidence 44 666 44433211 33489999998866654
Q ss_pred -C---------hhHHHHHHHHHhcCCCcEEEEEec
Q 024647 114 -D---------LPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 114 -~---------~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+ ...+++++.++|+ |||.+++...
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~ 215 (250)
T 1o9g_A 182 THWEGQVPGQPVAGLLRSLASALP-AHAVIAVTDR 215 (250)
T ss_dssp SSSSSCCCHHHHHHHHHHHHHHSC-TTCEEEEEES
T ss_pred ccccccccccHHHHHHHHHHHhcC-CCcEEEEeCc
Confidence 3 2379999999999 9999998443
No 165
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.46 E-value=2.8e-13 Score=117.09 Aligned_cols=116 Identities=12% Similarity=0.112 Sum_probs=87.8
Q ss_pred HHhhhCCCCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcC-------CCceE
Q 024647 11 QYAETRPNYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKL-------PNIRY 79 (265)
Q Consensus 11 ~Y~~~rp~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-------~~~~~ 79 (265)
.|.... .+.......+.... .+ .+|||+|||+|..+..++++++ +++++|+ +.+++.+++. .++.+
T Consensus 145 ~f~~~m-~~~~~~~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~ 221 (334)
T 2ip2_A 145 RFLLAM-KASNLAFHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSL 221 (334)
T ss_dssp HHHHHH-GGGHHHHHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEE
T ss_pred HHHHHH-HHHHHHHHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEE
Confidence 344444 44444455554443 34 8999999999999999998864 6999999 9999988752 46888
Q ss_pred EecCCccchhhhhhccCCCCceeEEEeccccccC-Chh--HHHHHHHHHhcCCCcEEEEEecC
Q 024647 80 ELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWF-DLP--QFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 80 ~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~-~~~--~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
.. +|+.+ +.+ ++||+|++..++|.+ +.. .+++++.++|+ |||.+++....
T Consensus 222 ~~-------~d~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~ 274 (334)
T 2ip2_A 222 VG-------GDMLQ-EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMA-GDGRVVVIERT 274 (334)
T ss_dssp EE-------SCTTT-CCC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSC-TTCEEEEEECC
T ss_pred ec-------CCCCC-CCC-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcC-CCCEEEEEEec
Confidence 87 45444 334 579999999999866 444 89999999999 99999987654
No 166
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.46 E-value=1.8e-13 Score=115.23 Aligned_cols=95 Identities=16% Similarity=0.151 Sum_probs=78.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc---CCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCCCce
Q 024647 32 TNHELAWDVGTGSGQAAASLSGI---FENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQSTV 101 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~ 101 (265)
.++.+|||+|||+|..+..+++. ..+|+++|+++.+++.+++. .++.+.. +|+.+ ++++++|
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~-------~d~~~-~~~~~~f 180 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR-------SDIAD-FISDQMY 180 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC-------SCTTT-CCCSCCE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEE-------Cchhc-cCcCCCc
Confidence 46689999999999999999987 56899999999999988752 3566666 55555 4566789
Q ss_pred eEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 102 DLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 102 Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
|+|++ |..++..+++++.++|+ |||.+++.++.
T Consensus 181 D~Vi~----~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~ 213 (275)
T 1yb2_A 181 DAVIA----DIPDPWNHVQKIASMMK-PGSVATFYLPN 213 (275)
T ss_dssp EEEEE----CCSCGGGSHHHHHHTEE-EEEEEEEEESS
T ss_pred cEEEE----cCcCHHHHHHHHHHHcC-CCCEEEEEeCC
Confidence 99998 44477899999999999 99999987764
No 167
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.45 E-value=1.8e-13 Score=109.02 Aligned_cols=113 Identities=13% Similarity=0.089 Sum_probs=77.9
Q ss_pred HHHHHHHhh--CCCCCeEEEEcCCcchhHHHHHhcC-----------CcEEEEcCCHHHHHHHHcCCCceEE-ecCCccc
Q 024647 22 ELFKFITSK--TTNHELAWDVGTGSGQAAASLSGIF-----------ENVIGTETSPKQIEFATKLPNIRYE-LTSPAMS 87 (265)
Q Consensus 22 ~l~~~l~~~--~~~~~~vlDvGcG~G~~~~~l~~~~-----------~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~ 87 (265)
++.+..... .+++.+|||+|||+|.++..++++. .+|+|+|+|+.+ ...++.+. ..+...
T Consensus 9 kl~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----~~~~~~~~~~~d~~~- 82 (196)
T 2nyu_A 9 KLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----PLEGATFLCPADVTD- 82 (196)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----CCTTCEEECSCCTTS-
T ss_pred HHHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----cCCCCeEEEeccCCC-
Confidence 344444333 3567899999999999999999874 579999999842 23567777 644311
Q ss_pred hhhhhh---ccCCCCceeEEEecccccc----C-Ch-------hHHHHHHHHHhcCCCcEEEEEecCCCC
Q 024647 88 IAELEQ---NVAAQSTVDLVTIAQAMHW----F-DL-------PQFYNQVKWVLKKPNGVIATWCYTVPE 142 (265)
Q Consensus 88 ~~d~~~---~~~~~~~~Dlv~~~~~~~~----~-~~-------~~~l~~~~~~Lk~pgG~l~~~~~~~~~ 142 (265)
.+... ..+++++||+|++..++|+ . +. ..+++++.++|+ |||.+++..+....
T Consensus 83 -~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~lv~~~~~~~~ 150 (196)
T 2nyu_A 83 -PRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQ-PGGTFLCKTWAGSQ 150 (196)
T ss_dssp -HHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEECCSGG
T ss_pred -HHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhc-CCCEEEEEecCCcc
Confidence 01100 0134568999999765554 2 33 478999999999 99999987765433
No 168
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.45 E-value=3.7e-13 Score=114.56 Aligned_cols=101 Identities=21% Similarity=0.174 Sum_probs=75.7
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC----------CCceEEecCCccchhhhhh-ccCC
Q 024647 31 TTNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL----------PNIRYELTSPAMSIAELEQ-NVAA 97 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~d~~~-~~~~ 97 (265)
.+.+.+|||+|||+|.++..++++. .+|+++|+|+.+++.+++. +++++.. +|+.. ++..
T Consensus 88 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~-------~D~~~~l~~~ 160 (296)
T 1inl_A 88 HPNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI-------ANGAEYVRKF 160 (296)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-------SCHHHHGGGC
T ss_pred CCCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE-------CcHHHHHhhC
Confidence 3556899999999999999999874 5799999999999988752 3566666 55443 2334
Q ss_pred CCceeEEEeccccccCC------hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 98 QSTVDLVTIAQAMHWFD------LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 98 ~~~~Dlv~~~~~~~~~~------~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+++||+|++....+|.. ...+++++.++|+ |||++++....
T Consensus 161 ~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~~ 207 (296)
T 1inl_A 161 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALK-EDGVFSAETED 207 (296)
T ss_dssp SSCEEEEEEEC----------CCSHHHHHHHHHHEE-EEEEEEEECCC
T ss_pred CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcC-CCcEEEEEccC
Confidence 57899999876545442 2689999999999 99999987543
No 169
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.45 E-value=9.2e-14 Score=114.55 Aligned_cols=96 Identities=14% Similarity=0.088 Sum_probs=76.4
Q ss_pred CCCeEEEEcCCcchhHHHHHhc------CCcEEEEcCCHHHHHHHHc-CCCceEEecCCccchhhhhh---ccC-CCCce
Q 024647 33 NHELAWDVGTGSGQAAASLSGI------FENVIGTETSPKQIEFATK-LPNIRYELTSPAMSIAELEQ---NVA-AQSTV 101 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~---~~~-~~~~~ 101 (265)
++.+|||||||+|..+..+++. ..+|+|||+|+.|++.|+. ..+++++.+++ .+ ++. ...+|
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~-------~~~~~l~~~~~~~f 153 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDC-------SDLTTFEHLREMAH 153 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCS-------SCSGGGGGGSSSCS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcc-------hhHHHHHhhccCCC
Confidence 4579999999999999999987 4689999999999988864 25788888544 33 232 33479
Q ss_pred eEEEeccccccCChhHHHHHHHH-HhcCCCcEEEEEec
Q 024647 102 DLVTIAQAMHWFDLPQFYNQVKW-VLKKPNGVIATWCY 138 (265)
Q Consensus 102 Dlv~~~~~~~~~~~~~~l~~~~~-~Lk~pgG~l~~~~~ 138 (265)
|+|++... | .+...++.++.+ +|| |||++++.+.
T Consensus 154 D~I~~d~~-~-~~~~~~l~~~~r~~Lk-pGG~lv~~d~ 188 (236)
T 2bm8_A 154 PLIFIDNA-H-ANTFNIMKWAVDHLLE-EGDYFIIEDM 188 (236)
T ss_dssp SEEEEESS-C-SSHHHHHHHHHHHTCC-TTCEEEECSC
T ss_pred CEEEECCc-h-HhHHHHHHHHHHhhCC-CCCEEEEEeC
Confidence 99998665 4 477889999997 999 9999998553
No 170
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.45 E-value=1.1e-13 Score=128.04 Aligned_cols=100 Identities=13% Similarity=0.100 Sum_probs=78.7
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc----C--CCceEEecCCccchhhhhhc--cCCCCcee
Q 024647 31 TTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK----L--PNIRYELTSPAMSIAELEQN--VAAQSTVD 102 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~----~--~~~~~~~~~~~~~~~d~~~~--~~~~~~~D 102 (265)
.+.+.+|||||||.|.++..|++.+++|+|||+|+.+++.|+. . .++++.+. +++++ ...+++||
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~-------~~~~~~~~~~~~~fD 136 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVG-------RIEEVIAALEEGEFD 136 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEEC-------CHHHHHHHCCTTSCS
T ss_pred cCCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEEC-------CHHHHhhhccCCCcc
Confidence 3566799999999999999999999999999999999998874 1 35788884 44554 24567899
Q ss_pred EEEeccccccC-ChhH--HHHHHHHHhcCCCcEEEEEec
Q 024647 103 LVTIAQAMHWF-DLPQ--FYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 103 lv~~~~~~~~~-~~~~--~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+|+|..++|++ |+.. .+..+.+.|+ ++|..++...
T Consensus 137 ~v~~~e~~ehv~~~~~~~~~~~~~~tl~-~~~~~~~~~~ 174 (569)
T 4azs_A 137 LAIGLSVFHHIVHLHGIDEVKRLLSRLA-DVTQAVILEL 174 (569)
T ss_dssp EEEEESCHHHHHHHHCHHHHHHHHHHHH-HHSSEEEEEC
T ss_pred EEEECcchhcCCCHHHHHHHHHHHHHhc-cccceeeEEe
Confidence 99999999999 6653 3456777888 7876555433
No 171
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.45 E-value=2.7e-13 Score=116.38 Aligned_cols=100 Identities=19% Similarity=0.197 Sum_probs=79.1
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC-----------CCceEEecCCccchhhhhh-ccC
Q 024647 31 TTNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL-----------PNIRYELTSPAMSIAELEQ-NVA 96 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~~~~~~d~~~-~~~ 96 (265)
.+.+.+|||||||+|.+++.++++. .+|++||+++.+++.|++. +++++.. +|+.. ++.
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~-------~D~~~~l~~ 147 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI-------DDARAYLER 147 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE-------SCHHHHHHH
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEE-------chHHHHHHh
Confidence 4566899999999999999999874 5799999999999988751 3566666 44444 223
Q ss_pred CCCceeEEEecccccc---CC-----hhHHHHHHHHHhcCCCcEEEEEec
Q 024647 97 AQSTVDLVTIAQAMHW---FD-----LPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 97 ~~~~~Dlv~~~~~~~~---~~-----~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.+++||+|++....|+ -. ...+++++.++|+ |||.+++...
T Consensus 148 ~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~ 196 (314)
T 1uir_A 148 TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLN-PGGVMGMQTG 196 (314)
T ss_dssp CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEE-EEEEEEEEEE
T ss_pred cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcC-CCcEEEEEcc
Confidence 4678999999887776 21 3689999999999 9999998653
No 172
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.44 E-value=5.1e-13 Score=108.95 Aligned_cols=92 Identities=14% Similarity=0.127 Sum_probs=72.6
Q ss_pred CeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcC--------CCceEEecCCccchhhhhhc-c-CCCCce
Q 024647 35 ELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKL--------PNIRYELTSPAMSIAELEQN-V-AAQSTV 101 (265)
Q Consensus 35 ~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~--------~~~~~~~~~~~~~~~d~~~~-~-~~~~~~ 101 (265)
.+|||+|||+|..+..+++.. .+|+++|+|+.+++.|++. .++.+.. +|+.+. + +++++|
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~-------gda~~~l~~~~~~~f 130 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL-------SRPLDVMSRLANDSY 130 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC-------SCHHHHGGGSCTTCE
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE-------cCHHHHHHHhcCCCc
Confidence 489999999999999999864 5799999999999998752 2577777 444433 2 336799
Q ss_pred eEEEeccccccCChhHHHHHHHHHhcCCCcEEEEE
Q 024647 102 DLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATW 136 (265)
Q Consensus 102 Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~ 136 (265)
|+|++.... -+...+++++.++|+ |||.+++-
T Consensus 131 D~V~~d~~~--~~~~~~l~~~~~~Lk-pGG~lv~d 162 (221)
T 3dr5_A 131 QLVFGQVSP--MDLKALVDAAWPLLR-RGGALVLA 162 (221)
T ss_dssp EEEEECCCT--TTHHHHHHHHHHHEE-EEEEEEET
T ss_pred CeEEEcCcH--HHHHHHHHHHHHHcC-CCcEEEEe
Confidence 999987432 255679999999999 99999983
No 173
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.44 E-value=4.6e-13 Score=111.09 Aligned_cols=97 Identities=13% Similarity=0.097 Sum_probs=75.7
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc---CCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhh-ccC--CC
Q 024647 32 TNHELAWDVGTGSGQAAASLSGI---FENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQ-NVA--AQ 98 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~-~~~--~~ 98 (265)
.++.+|||||||+|..+..+++. ..+|+++|+|+.+++.|++. .++.+..++ +.+ ++. ..
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d-------~~~~l~~~~~~ 134 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGP-------ALQSLESLGEC 134 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC-------HHHHHHTCCSC
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC-------HHHHHHhcCCC
Confidence 35689999999999999999988 45799999999999988752 368888844 333 222 23
Q ss_pred CceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 99 STVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 99 ~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
++||+|++... .-+...+++++.++|+ |||+|++.+.
T Consensus 135 ~~fD~V~~d~~--~~~~~~~l~~~~~~Lk-pGG~lv~~~~ 171 (248)
T 3tfw_A 135 PAFDLIFIDAD--KPNNPHYLRWALRYSR-PGTLIIGDNV 171 (248)
T ss_dssp CCCSEEEECSC--GGGHHHHHHHHHHTCC-TTCEEEEECC
T ss_pred CCeEEEEECCc--hHHHHHHHHHHHHhcC-CCeEEEEeCC
Confidence 58999998653 1255689999999999 9999988544
No 174
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.44 E-value=3.7e-13 Score=111.47 Aligned_cols=98 Identities=18% Similarity=0.220 Sum_probs=75.4
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHc--------------CCCceEEecCCccchhhhhh-cc
Q 024647 33 NHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATK--------------LPNIRYELTSPAMSIAELEQ-NV 95 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~--------------~~~~~~~~~~~~~~~~d~~~-~~ 95 (265)
++.+|||+|||+|.++..+++.++ +|+|+|+|+.|++.+++ ..|+.+..+++ .+ ++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~-------~~~l~ 121 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNA-------MKFLP 121 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCT-------TSCGG
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccH-------HHHHH
Confidence 567899999999999999999875 59999999999987753 25777877544 33 33
Q ss_pred --CCCCceeEEEeccccccCCh---------hHHHHHHHHHhcCCCcEEEEEec
Q 024647 96 --AAQSTVDLVTIAQAMHWFDL---------PQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 96 --~~~~~~Dlv~~~~~~~~~~~---------~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
++.+++|.|+....-.|... ..++.++.++|+ |||.|++.+.
T Consensus 122 ~~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~Lk-pgG~l~~~td 174 (246)
T 2vdv_E 122 NFFEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLK-EGGVVYTITD 174 (246)
T ss_dssp GTSCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEE-EEEEEEEEES
T ss_pred HhccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcC-CCCEEEEEec
Confidence 56789999996643333311 479999999999 9999998543
No 175
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.44 E-value=3.1e-13 Score=108.64 Aligned_cols=94 Identities=20% Similarity=0.161 Sum_probs=76.2
Q ss_pred CCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHc------CCCceEEecCCccchhhhhhccCCCCceeEE
Q 024647 33 NHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATK------LPNIRYELTSPAMSIAELEQNVAAQSTVDLV 104 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv 104 (265)
++.+|||+|||+|..+..+++.. .+++++|+|+.+++.+++ ..++.+.. +|+.+.+ +.++||+|
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~-------~d~~~~~-~~~~~D~i 136 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQ-------SRVEEFP-SEPPFDGV 136 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEE-------CCTTTSC-CCSCEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEe-------cchhhCC-ccCCcCEE
Confidence 46799999999999999999874 589999999999998875 24577777 5555554 45789999
Q ss_pred EeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 105 TIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+++.. .+...+++++.++|+ |||.+++...
T Consensus 137 ~~~~~---~~~~~~l~~~~~~L~-~gG~l~~~~~ 166 (207)
T 1jsx_A 137 ISRAF---ASLNDMVSWCHHLPG-EQGRFYALKG 166 (207)
T ss_dssp ECSCS---SSHHHHHHHHTTSEE-EEEEEEEEES
T ss_pred EEecc---CCHHHHHHHHHHhcC-CCcEEEEEeC
Confidence 98542 367889999999999 9999988643
No 176
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.44 E-value=4.3e-13 Score=110.23 Aligned_cols=106 Identities=21% Similarity=0.219 Sum_probs=81.1
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcC-CcEEEEcCCHHHHHHHHcC------CCceEEecCCccchhh
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIF-ENVIGTETSPKQIEFATKL------PNIRYELTSPAMSIAE 90 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~d 90 (265)
.+.+...+.... .++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.+++. .++.+.. +|
T Consensus 76 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~-------~d 148 (235)
T 1jg1_A 76 APHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVIL-------GD 148 (235)
T ss_dssp CHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEE-------SC
T ss_pred cHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEE-------CC
Confidence 344555554443 466799999999999999999987 7999999999999988752 4677777 44
Q ss_pred hhhccCCC-CceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 91 LEQNVAAQ-STVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 91 ~~~~~~~~-~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+ ..+++. .+||+|++...++++. +++.++|+ |||.+++....
T Consensus 149 ~-~~~~~~~~~fD~Ii~~~~~~~~~-----~~~~~~L~-pgG~lvi~~~~ 191 (235)
T 1jg1_A 149 G-SKGFPPKAPYDVIIVTAGAPKIP-----EPLIEQLK-IGGKLIIPVGS 191 (235)
T ss_dssp G-GGCCGGGCCEEEEEECSBBSSCC-----HHHHHTEE-EEEEEEEEECS
T ss_pred c-ccCCCCCCCccEEEECCcHHHHH-----HHHHHhcC-CCcEEEEEEec
Confidence 3 222333 3599999999888764 37899999 99999987664
No 177
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.44 E-value=4.7e-13 Score=116.96 Aligned_cols=97 Identities=13% Similarity=0.174 Sum_probs=79.7
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHc------CC-CceEEecCCccchhhhhhccCCCCcee
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATK------LP-NIRYELTSPAMSIAELEQNVAAQSTVD 102 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~------~~-~~~~~~~~~~~~~~d~~~~~~~~~~~D 102 (265)
.+..+|||||||+|.++..++++++ +++++|+ +.+++.+++ .. ++.+.. +|+.+.++++ .|
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~-------~d~~~~~~~~--~D 258 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIA-------VDIYKESYPE--AD 258 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEE-------CCTTTSCCCC--CS
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEe-------CccccCCCCC--CC
Confidence 4568999999999999999999875 7999999 999998874 22 377777 5555555444 49
Q ss_pred EEEeccccccC-C--hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 103 LVTIAQAMHWF-D--LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 103 lv~~~~~~~~~-~--~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|++..++|.+ + ...+++++.++|+ |||.+++....
T Consensus 259 ~v~~~~vlh~~~d~~~~~~l~~~~~~L~-pgG~l~i~e~~ 297 (359)
T 1x19_A 259 AVLFCRILYSANEQLSTIMCKKAFDAMR-SGGRLLILDMV 297 (359)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHTTCC-TTCEEEEEEEC
T ss_pred EEEEechhccCCHHHHHHHHHHHHHhcC-CCCEEEEEecc
Confidence 99999999877 4 5789999999999 99999886654
No 178
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.43 E-value=9.7e-13 Score=114.77 Aligned_cols=113 Identities=18% Similarity=0.124 Sum_probs=88.8
Q ss_pred CcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcC------CCceEEecCCccc
Q 024647 19 YPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKL------PNIRYELTSPAMS 87 (265)
Q Consensus 19 y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~ 87 (265)
..+.+...+.... .++.+|||+|||+|.++..++..+ .+|+|+|+|+.|++.|++. .++.+.+
T Consensus 187 l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~------ 260 (354)
T 3tma_A 187 LTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLR------ 260 (354)
T ss_dssp CCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEE------
T ss_pred cCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEe------
Confidence 4556666665543 456789999999999999999876 6899999999999998752 2577777
Q ss_pred hhhhhhccCCCCceeEEEeccccccC-C--------hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 88 IAELEQNVAAQSTVDLVTIAQAMHWF-D--------LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 88 ~~d~~~~~~~~~~~Dlv~~~~~~~~~-~--------~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|+.+++.+.++||+|+++..+++. . ...+++++.++|+ |||.+++.++.
T Consensus 261 -~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~Lk-pgG~l~i~t~~ 319 (354)
T 3tma_A 261 -ADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLP-PGGRVALLTLR 319 (354)
T ss_dssp -CCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSC-TTCEEEEEESC
T ss_pred -CChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcC-CCcEEEEEeCC
Confidence 6677776666789999998766543 1 2578999999999 99999997764
No 179
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.43 E-value=4.8e-13 Score=107.98 Aligned_cols=112 Identities=12% Similarity=0.174 Sum_probs=81.4
Q ss_pred hCCCCcHHHHHHHHhh--CCCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcC-------CCceEEec
Q 024647 15 TRPNYPEELFKFITSK--TTNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKL-------PNIRYELT 82 (265)
Q Consensus 15 ~rp~y~~~l~~~l~~~--~~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-------~~~~~~~~ 82 (265)
..|...+.....+... ..++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.|++. .++.+..
T Consensus 36 ~~p~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~- 114 (210)
T 3c3p_A 36 NIPIVDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQV- 114 (210)
T ss_dssp TCCCCCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEE-
T ss_pred CCCCcCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEE-
Confidence 3454444444433322 2356789999999999999999874 5899999999999988752 2467777
Q ss_pred CCccchhhhhhc-cCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 83 SPAMSIAELEQN-VAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 83 ~~~~~~~d~~~~-~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
+|+.+. +..++ ||+|++... ..+...+++++.++|+ |||.+++.+
T Consensus 115 ------~d~~~~~~~~~~-fD~v~~~~~--~~~~~~~l~~~~~~Lk-pgG~lv~~~ 160 (210)
T 3c3p_A 115 ------GDPLGIAAGQRD-IDILFMDCD--VFNGADVLERMNRCLA-KNALLIAVN 160 (210)
T ss_dssp ------SCHHHHHTTCCS-EEEEEEETT--TSCHHHHHHHHGGGEE-EEEEEEEES
T ss_pred ------ecHHHHhccCCC-CCEEEEcCC--hhhhHHHHHHHHHhcC-CCeEEEEEC
Confidence 444432 33345 999998732 2367889999999999 999998844
No 180
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.43 E-value=6.1e-13 Score=114.95 Aligned_cols=99 Identities=18% Similarity=0.257 Sum_probs=76.9
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC----------CCceEEecCCccchhhhhhc-c-C
Q 024647 31 TTNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL----------PNIRYELTSPAMSIAELEQN-V-A 96 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~d~~~~-~-~ 96 (265)
.+.+.+|||||||+|.+++.++++. .+|+++|+|+.|++.|++. +++++.. +|+.+. + .
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~-------~D~~~~l~~~ 190 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI-------GDGVAFLKNA 190 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE-------SCHHHHHHTS
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE-------CCHHHHHHhc
Confidence 3566899999999999999999874 5799999999999988752 3567776 554443 1 2
Q ss_pred CCCceeEEEeccccccC--C---hhHHHHHHHHHhcCCCcEEEEEe
Q 024647 97 AQSTVDLVTIAQAMHWF--D---LPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 97 ~~~~~Dlv~~~~~~~~~--~---~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
++++||+|+++...++. + ...+++++.++|+ |||.+++..
T Consensus 191 ~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~ 235 (334)
T 1xj5_A 191 AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALR-PGGVVCTQA 235 (334)
T ss_dssp CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEE-EEEEEEEEC
T ss_pred cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcC-CCcEEEEec
Confidence 45789999997643322 2 3689999999999 999999853
No 181
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.43 E-value=4.3e-13 Score=117.69 Aligned_cols=96 Identities=17% Similarity=0.134 Sum_probs=78.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCCCcee
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQSTVD 102 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~D 102 (265)
.++.+|||||||+|.++..+++.++ +++++|+ +.+++.+++. .++.+.. +|+.+ +++. .||
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~-------~d~~~-~~~~-~~D 250 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAE-------GDFFK-PLPV-TAD 250 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEE-------CCTTS-CCSC-CEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEe-------CCCCC-cCCC-CCC
Confidence 4568999999999999999999864 7999999 9999988752 2688887 44433 2333 499
Q ss_pred EEEeccccccC-Chh--HHHHHHHHHhcCCCcEEEEEec
Q 024647 103 LVTIAQAMHWF-DLP--QFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 103 lv~~~~~~~~~-~~~--~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+|++..++|++ +.. .+++++.++|+ |||.+++...
T Consensus 251 ~v~~~~vl~~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~ 288 (374)
T 1qzz_A 251 VVLLSFVLLNWSDEDALTILRGCVRALE-PGGRLLVLDR 288 (374)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcC-CCcEEEEEec
Confidence 99999999987 443 79999999999 9999998766
No 182
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.43 E-value=3e-13 Score=116.83 Aligned_cols=94 Identities=22% Similarity=0.225 Sum_probs=76.0
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCCCceeE
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQSTVDL 103 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dl 103 (265)
.++.+|||+|||+|.++..+++.+. +|+|+|+| .|++.|++. .++.+.. +|++++++++++||+
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~-------~d~~~~~~~~~~~D~ 108 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLR-------GKLEDVHLPFPKVDI 108 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEE-------SCTTTSCCSSSCEEE
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEE-------CchhhccCCCCcccE
Confidence 4567899999999999999998875 79999999 588887652 3477777 666777767789999
Q ss_pred EEeccccc---cC-ChhHHHHHHHHHhcCCCcEEE
Q 024647 104 VTIAQAMH---WF-DLPQFYNQVKWVLKKPNGVIA 134 (265)
Q Consensus 104 v~~~~~~~---~~-~~~~~l~~~~~~Lk~pgG~l~ 134 (265)
|++....+ +. +...++.++.++|+ |||.++
T Consensus 109 Ivs~~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~li 142 (328)
T 1g6q_1 109 IISEWMGYFLLYESMMDTVLYARDHYLV-EGGLIF 142 (328)
T ss_dssp EEECCCBTTBSTTCCHHHHHHHHHHHEE-EEEEEE
T ss_pred EEEeCchhhcccHHHHHHHHHHHHhhcC-CCeEEE
Confidence 99985433 22 56789999999999 999987
No 183
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.43 E-value=7.9e-13 Score=111.21 Aligned_cols=100 Identities=20% Similarity=0.190 Sum_probs=81.7
Q ss_pred HhhCCCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHc------CCCceEEecCCccchhhhhhccCCCC
Q 024647 28 TSKTTNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATK------LPNIRYELTSPAMSIAELEQNVAAQS 99 (265)
Q Consensus 28 ~~~~~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~d~~~~~~~~~ 99 (265)
.....++.+|||+|||+|.++..+++.++ +|+|+|+|+.+++.|++ ..++.+.. +|+.+.+ ..+
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~-------~d~~~~~-~~~ 185 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPIL-------ADNRDVE-LKD 185 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEE-------SCGGGCC-CTT
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEE-------CChHHcC-ccC
Confidence 33456778999999999999999999865 89999999999998875 24677777 5556553 256
Q ss_pred ceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 100 TVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 100 ~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+||+|+++... +...++.++.+.|+ |||.+++.+..
T Consensus 186 ~~D~Vi~d~p~---~~~~~l~~~~~~Lk-pgG~l~~s~~~ 221 (272)
T 3a27_A 186 VADRVIMGYVH---KTHKFLDKTFEFLK-DRGVIHYHETV 221 (272)
T ss_dssp CEEEEEECCCS---SGGGGHHHHHHHEE-EEEEEEEEEEE
T ss_pred CceEEEECCcc---cHHHHHHHHHHHcC-CCCEEEEEEcC
Confidence 89999998653 67789999999999 99999987664
No 184
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.43 E-value=1.5e-12 Score=107.50 Aligned_cols=109 Identities=19% Similarity=0.232 Sum_probs=83.8
Q ss_pred CCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccch
Q 024647 18 NYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSI 88 (265)
Q Consensus 18 ~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~ 88 (265)
.||.... .+.... .++.+|||+|||+|.++..+++...+|+++|+++.+++.+++. .++.+..
T Consensus 75 ~~~~~~~-~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~------- 146 (248)
T 2yvl_A 75 IYPKDSF-YIALKLNLNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFN------- 146 (248)
T ss_dssp CCHHHHH-HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEEC-------
T ss_pred ccchhHH-HHHHhcCCCCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEE-------
Confidence 3444443 444443 4678999999999999999998877899999999999988752 4566666
Q ss_pred hhhhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 89 AELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 89 ~d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|+.+...++++||+|+++ ..++..+++++.++|+ |||.+++..+.
T Consensus 147 ~d~~~~~~~~~~~D~v~~~----~~~~~~~l~~~~~~L~-~gG~l~~~~~~ 192 (248)
T 2yvl_A 147 VDFKDAEVPEGIFHAAFVD----VREPWHYLEKVHKSLM-EGAPVGFLLPT 192 (248)
T ss_dssp SCTTTSCCCTTCBSEEEEC----SSCGGGGHHHHHHHBC-TTCEEEEEESS
T ss_pred cChhhcccCCCcccEEEEC----CcCHHHHHHHHHHHcC-CCCEEEEEeCC
Confidence 4555543256789999984 2367799999999999 99999997764
No 185
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.42 E-value=6.9e-13 Score=114.13 Aligned_cols=101 Identities=20% Similarity=0.235 Sum_probs=77.0
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC----------CCceEEecCCccchhhhhhc-cCC
Q 024647 31 TTNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL----------PNIRYELTSPAMSIAELEQN-VAA 97 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~d~~~~-~~~ 97 (265)
.+++.+|||+|||+|.+++.++++. .+|+++|+|+.+++.|++. +++++.. +|+.+. +..
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~-------~D~~~~l~~~ 186 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI-------EDASKFLENV 186 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE-------SCHHHHHHHC
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE-------ccHHHHHhhc
Confidence 3566899999999999999999874 5799999999999998752 3466666 454432 223
Q ss_pred CCceeEEEeccccccCC-----hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 98 QSTVDLVTIAQAMHWFD-----LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 98 ~~~~Dlv~~~~~~~~~~-----~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+++||+|+++..-++-. ...+++++.++|+ |||.+++....
T Consensus 187 ~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~~ 232 (321)
T 2pt6_A 187 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALK-PNGYCVAQCES 232 (321)
T ss_dssp CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEE-EEEEEEEEECC
T ss_pred CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcC-CCcEEEEEcCC
Confidence 57899999876433311 1689999999999 99999987543
No 186
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.42 E-value=6.3e-13 Score=109.20 Aligned_cols=109 Identities=15% Similarity=0.142 Sum_probs=70.9
Q ss_pred HHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC-CCceEEe-cCCccchhhhhhccC
Q 024647 22 ELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL-PNIRYEL-TSPAMSIAELEQNVA 96 (265)
Q Consensus 22 ~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-~~~~~~~-~~~~~~~~d~~~~~~ 96 (265)
++.+.|.... .++.+|||||||+|.++..++++++ +|+|+|+|+.|++.+++. +.+.... .+..... ..++
T Consensus 24 kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~--~~~~-- 99 (232)
T 3opn_A 24 KLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAV--LADF-- 99 (232)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCC--GGGC--
T ss_pred HHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeC--HhHc--
Confidence 5555555443 2456999999999999999999985 899999999999987653 3322211 1221111 1122
Q ss_pred CCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 97 AQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 97 ~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
+...+|.+.+..++. ....+++++.++|| |||.+++..
T Consensus 100 ~~~~~d~~~~D~v~~--~l~~~l~~i~rvLk-pgG~lv~~~ 137 (232)
T 3opn_A 100 EQGRPSFTSIDVSFI--SLDLILPPLYEILE-KNGEVAALI 137 (232)
T ss_dssp CSCCCSEEEECCSSS--CGGGTHHHHHHHSC-TTCEEEEEE
T ss_pred CcCCCCEEEEEEEhh--hHHHHHHHHHHhcc-CCCEEEEEE
Confidence 111234444333322 23789999999999 999998853
No 187
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.41 E-value=1e-12 Score=110.67 Aligned_cols=109 Identities=22% Similarity=0.266 Sum_probs=83.3
Q ss_pred CCCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhc---CCcEEEEcCCHHHHHHHHcC-------CCceEEecCC
Q 024647 17 PNYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGI---FENVIGTETSPKQIEFATKL-------PNIRYELTSP 84 (265)
Q Consensus 17 p~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~ 84 (265)
+.||.... .+.... .++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|++. .++.+..
T Consensus 95 ~~~~~~~~-~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~--- 170 (277)
T 1o54_A 95 IVYPKDSS-FIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV--- 170 (277)
T ss_dssp CCCHHHHH-HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC---
T ss_pred ccCHHHHH-HHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE---
Confidence 34554443 333332 46679999999999999999987 35799999999999988752 3566666
Q ss_pred ccchhhhhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 85 AMSIAELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 85 ~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|+.+. +++++||+|+++ ..++..+++++.++|+ |||.+++..+.
T Consensus 171 ----~d~~~~-~~~~~~D~V~~~----~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 215 (277)
T 1o54_A 171 ----RDISEG-FDEKDVDALFLD----VPDPWNYIDKCWEALK-GGGRFATVCPT 215 (277)
T ss_dssp ----CCGGGC-CSCCSEEEEEEC----CSCGGGTHHHHHHHEE-EEEEEEEEESS
T ss_pred ----CCHHHc-ccCCccCEEEEC----CcCHHHHHHHHHHHcC-CCCEEEEEeCC
Confidence 555554 466789999984 2366789999999999 99999987764
No 188
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.41 E-value=5.5e-13 Score=111.43 Aligned_cols=100 Identities=15% Similarity=0.148 Sum_probs=76.6
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC-C---------CceEEecCCccchhhhhhc-----
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL-P---------NIRYELTSPAMSIAELEQN----- 94 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-~---------~~~~~~~~~~~~~~d~~~~----- 94 (265)
.++.+|||+|||+|.++..+++++ .+|+|+|+++.+++.|++. . ++.+.. +|+.+.
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~-------~D~~~~~~~~~ 107 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLE-------ADVTLRAKARV 107 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEE-------CCTTCCHHHHH
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEe-------CCHHHHhhhhh
Confidence 356789999999999999999987 4799999999999998752 1 256666 444443
Q ss_pred --cCCCCceeEEEeccccccC-------------------ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 95 --VAAQSTVDLVTIAQAMHWF-------------------DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 95 --~~~~~~~Dlv~~~~~~~~~-------------------~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
.+++++||+|+++..++.. +...+++.+.++|+ |||.+++....
T Consensus 108 ~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 172 (260)
T 2ozv_A 108 EAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMV-SGGQLSLISRP 172 (260)
T ss_dssp HTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEE-EEEEEEEEECG
T ss_pred hhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcC-CCCEEEEEEcH
Confidence 2456789999998543322 35689999999999 99999886543
No 189
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.40 E-value=8.3e-13 Score=111.72 Aligned_cols=101 Identities=20% Similarity=0.241 Sum_probs=77.9
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC----------CCceEEecCCccchhhhhhc-cCC
Q 024647 31 TTNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL----------PNIRYELTSPAMSIAELEQN-VAA 97 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~d~~~~-~~~ 97 (265)
.+++.+|||+|||+|..++.++++. .+|+++|+++.+++.+++. +++++.. +|+.+. +..
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~-------~D~~~~l~~~ 148 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI-------EDASKFLENV 148 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE-------SCHHHHHHHC
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEE-------CChHHHHHhC
Confidence 3566899999999999999999875 5799999999999998752 3566666 444432 223
Q ss_pred CCceeEEEeccccccCCh-----hHHHHHHHHHhcCCCcEEEEEecC
Q 024647 98 QSTVDLVTIAQAMHWFDL-----PQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 98 ~~~~Dlv~~~~~~~~~~~-----~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+++||+|++....++... ..+++++.++|+ |||.+++....
T Consensus 149 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~-pgG~lv~~~~~ 194 (283)
T 2i7c_A 149 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALK-PNGYCVAQCES 194 (283)
T ss_dssp CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEE-EEEEEEEECCC
T ss_pred CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcC-CCcEEEEECCC
Confidence 578999999765554311 589999999999 99999987543
No 190
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.40 E-value=9.5e-13 Score=111.24 Aligned_cols=112 Identities=13% Similarity=0.134 Sum_probs=81.6
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcC-CHHHHHHHHcCC----------------CceE
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFE-NVIGTET-SPKQIEFATKLP----------------NIRY 79 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~-s~~~~~~a~~~~----------------~~~~ 79 (265)
...+.+++.... .++.+|||+|||+|.++..+++.+. +|+++|+ |+.+++.+++.. ++.+
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~ 143 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKV 143 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEE
T ss_pred HHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEE
Confidence 345666776553 4667999999999999999998876 8999999 899999887521 3444
Q ss_pred EecCCccchhh-hhhcc--CCCCceeEEEeccccccC-ChhHHHHHHHHHhc---C-CCcEEEE
Q 024647 80 ELTSPAMSIAE-LEQNV--AAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLK---K-PNGVIAT 135 (265)
Q Consensus 80 ~~~~~~~~~~d-~~~~~--~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk---~-pgG~l~~ 135 (265)
..... ++ ...+. +++++||+|+++.++++. +...+++.+.++|+ + |||.+++
T Consensus 144 ~~~~~----~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 144 VPYRW----GDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp EECCT----TSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred EEecC----CCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 43221 11 12221 035789999998988877 78899999999998 3 2887665
No 191
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.40 E-value=9.8e-13 Score=112.32 Aligned_cols=98 Identities=17% Similarity=0.201 Sum_probs=75.0
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC----------CCceEEecCCccchhhhhh-ccCCC
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL----------PNIRYELTSPAMSIAELEQ-NVAAQ 98 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~d~~~-~~~~~ 98 (265)
+.+.+|||||||+|.+++.++++. .+|++||+++.+++.|++. +++++.. +|+.+ ++..+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~-------~Da~~~l~~~~ 166 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV-------GDGFEFMKQNQ 166 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-------SCHHHHHHTCS
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE-------CcHHHHHhhCC
Confidence 566899999999999999999875 5799999999999988752 3566666 45443 33346
Q ss_pred CceeEEEeccccccC-----ChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 99 STVDLVTIAQAMHWF-----DLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 99 ~~~Dlv~~~~~~~~~-----~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
++||+|++....++. ....+++++.++|+ |||.+++..
T Consensus 167 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~ 209 (304)
T 2o07_A 167 DAFDVIITDSSDPMGPAESLFKESYYQLMKTALK-EDGVLCCQG 209 (304)
T ss_dssp SCEEEEEEECC-----------CHHHHHHHHHEE-EEEEEEEEE
T ss_pred CCceEEEECCCCCCCcchhhhHHHHHHHHHhccC-CCeEEEEec
Confidence 789999997765543 12568999999999 999999865
No 192
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.40 E-value=7.2e-13 Score=115.36 Aligned_cols=94 Identities=21% Similarity=0.225 Sum_probs=75.0
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCCCceeE
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQSTVDL 103 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dl 103 (265)
.++.+|||||||+|.++..+++.+. +|+|+|+|+ |++.|++. .++.+.. +|+++++++ ++||+
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~-------~d~~~~~~~-~~~D~ 119 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIP-------GKVEEVSLP-EQVDI 119 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEE-------SCTTTCCCS-SCEEE
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEE-------cchhhCCCC-CceeE
Confidence 4668999999999999999998865 899999996 88877642 4677777 566666544 68999
Q ss_pred EEeccccccC---ChhHHHHHHHHHhcCCCcEEEE
Q 024647 104 VTIAQAMHWF---DLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 104 v~~~~~~~~~---~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
|++...+++. +....+.++.++|+ |||.+++
T Consensus 120 Ivs~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~li~ 153 (348)
T 2y1w_A 120 IISEPMGYMLFNERMLESYLHAKKYLK-PSGNMFP 153 (348)
T ss_dssp EEECCCBTTBTTTSHHHHHHHGGGGEE-EEEEEES
T ss_pred EEEeCchhcCChHHHHHHHHHHHhhcC-CCeEEEE
Confidence 9999765544 23578889999999 9999985
No 193
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.40 E-value=5.9e-13 Score=108.45 Aligned_cols=100 Identities=19% Similarity=0.231 Sum_probs=74.8
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc---CCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccC--CCC
Q 024647 32 TNHELAWDVGTGSGQAAASLSGI---FENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVA--AQS 99 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~--~~~ 99 (265)
.++.+|||+|||+|..+..+++. ..+|+++|+++.+++.+++. .++.+..+++. ..+..... ..+
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~---~~~~~~~~~~~~~ 139 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAK---DTLAELIHAGQAW 139 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHH---HHHHHHHTTTCTT
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHH---HHHHHhhhccCCC
Confidence 35679999999999999999987 45799999999999988752 34788885431 01111111 116
Q ss_pred ceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 100 TVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 100 ~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+||+|++... . +...+++++.++|+ |||.+++.+.
T Consensus 140 ~fD~v~~~~~---~~~~~~~l~~~~~~L~-pgG~lv~~~~ 175 (225)
T 3tr6_A 140 QYDLIYIDAD---KANTDLYYEESLKLLR-EGGLIAVDNV 175 (225)
T ss_dssp CEEEEEECSC---GGGHHHHHHHHHHHEE-EEEEEEEECS
T ss_pred CccEEEECCC---HHHHHHHHHHHHHhcC-CCcEEEEeCC
Confidence 8999996542 3 56789999999999 9999998544
No 194
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.40 E-value=5.6e-13 Score=118.46 Aligned_cols=110 Identities=14% Similarity=0.168 Sum_probs=80.4
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHH-------Hc--------CCCceEEe
Q 024647 21 EELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFA-------TK--------LPNIRYEL 81 (265)
Q Consensus 21 ~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a-------~~--------~~~~~~~~ 81 (265)
+.++..+.... .++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.| ++ ..++.+..
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~ 307 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 307 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE
Confidence 34444444443 467899999999999999999864 3699999999998877 43 24677766
Q ss_pred cCCccchhhhhh---ccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 82 TSPAMSIAELEQ---NVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 82 ~~~~~~~~d~~~---~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
++. +.. +....++||+|+++..++.-+...++.++.++|| |||.+++..
T Consensus 308 gD~------~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LK-pGG~lVi~d 359 (433)
T 1u2z_A 308 KKS------FVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAK-VGCKIISLK 359 (433)
T ss_dssp SSC------STTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCC-TTCEEEESS
T ss_pred cCc------cccccccccccCCCCEEEEeCccccccHHHHHHHHHHhCC-CCeEEEEee
Confidence 422 111 1112368999999876644477788999999999 999999854
No 195
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.39 E-value=8.4e-13 Score=114.32 Aligned_cols=110 Identities=19% Similarity=0.235 Sum_probs=78.9
Q ss_pred CCcHHHHHHHHhh-CCCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcC-----------------CC
Q 024647 18 NYPEELFKFITSK-TTNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKL-----------------PN 76 (265)
Q Consensus 18 ~y~~~l~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----------------~~ 76 (265)
.||......+... ..++.+|||+|||+|.++..+++.. .+|+++|+++.+++.|++. .+
T Consensus 89 ~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~ 168 (336)
T 2b25_A 89 TFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDN 168 (336)
T ss_dssp CCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCC
T ss_pred cCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCc
Confidence 4544333333222 3567899999999999999999874 5799999999999988752 35
Q ss_pred ceEEecCCccchhhhhhc--cCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 77 IRYELTSPAMSIAELEQN--VAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 77 ~~~~~~~~~~~~~d~~~~--~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+.+.. +|+.+. ++++++||+|+++.. ++..++.++.++|+ |||.+++..+.
T Consensus 169 v~~~~-------~d~~~~~~~~~~~~fD~V~~~~~----~~~~~l~~~~~~Lk-pgG~lv~~~~~ 221 (336)
T 2b25_A 169 VDFIH-------KDISGATEDIKSLTFDAVALDML----NPHVTLPVFYPHLK-HGGVCAVYVVN 221 (336)
T ss_dssp EEEEE-------SCTTCCC-------EEEEEECSS----STTTTHHHHGGGEE-EEEEEEEEESS
T ss_pred eEEEE-------CChHHcccccCCCCeeEEEECCC----CHHHHHHHHHHhcC-CCcEEEEEeCC
Confidence 77777 455544 345678999998633 45568999999999 99999987764
No 196
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.39 E-value=5.6e-13 Score=116.42 Aligned_cols=95 Identities=18% Similarity=0.237 Sum_probs=79.9
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecccc
Q 024647 33 NHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAM 110 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~ 110 (265)
+..+|||||||+|.++..++++++ +++++|+ +.+++.+++.+++.+.. +|+.+ +.+ +||+|++..++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~-------~d~~~-~~~--~~D~v~~~~vl 261 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGNENLNFVG-------GDMFK-SIP--SADAVLLKWVL 261 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCCSSEEEEE-------CCTTT-CCC--CCSEEEEESCG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccCCCcEEEe-------CccCC-CCC--CceEEEEcccc
Confidence 557899999999999999999876 5889999 79999888777788887 55544 444 49999999999
Q ss_pred ccC-Chh--HHHHHHHHHhcCC---CcEEEEEecC
Q 024647 111 HWF-DLP--QFYNQVKWVLKKP---NGVIATWCYT 139 (265)
Q Consensus 111 ~~~-~~~--~~l~~~~~~Lk~p---gG~l~~~~~~ 139 (265)
|++ |.. .+++++.++|+ | ||.+++....
T Consensus 262 h~~~d~~~~~~l~~~~~~L~-p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 262 HDWNDEQSLKILKNSKEAIS-HKGKDGKVIIIDIS 295 (358)
T ss_dssp GGSCHHHHHHHHHHHHHHTG-GGGGGCEEEEEECE
T ss_pred cCCCHHHHHHHHHHHHHhCC-CCCCCcEEEEEEec
Confidence 977 655 89999999999 9 9999886654
No 197
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.39 E-value=1.9e-13 Score=107.29 Aligned_cols=85 Identities=13% Similarity=0.111 Sum_probs=72.0
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC--CCceEEecCCccchhhhhhccC---CCCceeEEE
Q 024647 31 TTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL--PNIRYELTSPAMSIAELEQNVA---AQSTVDLVT 105 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~~d~~~~~~---~~~~~Dlv~ 105 (265)
++++.+|||+|||+ +++|+|+.|++.|++. .++.+.. +|+++++. ++++||+|+
T Consensus 10 ~~~g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~~~~~~~~-------~d~~~~~~~~~~~~~fD~V~ 68 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS--------------SPVEALKGLVDKLQALTGNEGRVSV-------ENIKQLLQSAHKESSFDIIL 68 (176)
T ss_dssp CCTTSEEEEEECTT--------------SCHHHHHHHHHHHHHHTTTTSEEEE-------EEGGGGGGGCCCSSCEEEEE
T ss_pred CCCCCEEEEecCCc--------------eeeeCCHHHHHHHHHhcccCcEEEE-------echhcCccccCCCCCEeEEE
Confidence 46788999999996 2399999999999863 3577777 66777765 788999999
Q ss_pred eccccccC--ChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 106 IAQAMHWF--DLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 106 ~~~~~~~~--~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
++.++||+ ++..++++++|+|| |||.+++..
T Consensus 69 ~~~~l~~~~~~~~~~l~~~~r~Lk-pgG~l~~~~ 101 (176)
T 2ld4_A 69 SGLVPGSTTLHSAEILAEIARILR-PGGCLFLKE 101 (176)
T ss_dssp ECCSTTCCCCCCHHHHHHHHHHEE-EEEEEEEEE
T ss_pred ECChhhhcccCHHHHHHHHHHHCC-CCEEEEEEc
Confidence 99999998 78899999999999 999999853
No 198
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.39 E-value=1.4e-12 Score=109.06 Aligned_cols=93 Identities=15% Similarity=0.034 Sum_probs=74.8
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC----------CCceEEecCCccchhhhhhccCCCCce
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL----------PNIRYELTSPAMSIAELEQNVAAQSTV 101 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~d~~~~~~~~~~~ 101 (265)
+.+.+|||||||+|.+++.++++..+|+++|+++.|++.|++. +++++.. +|+.... ++|
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~-------~D~~~~~---~~f 140 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAK-------QLLDLDI---KKY 140 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEES-------SGGGSCC---CCE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEe-------chHHHHH---hhC
Confidence 5568999999999999999987756799999999999999863 2344444 6665553 789
Q ss_pred eEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 102 DLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 102 Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
|+|++.. .++..+++++.++|+ |||++++....
T Consensus 141 D~Ii~d~----~dp~~~~~~~~~~L~-pgG~lv~~~~~ 173 (262)
T 2cmg_A 141 DLIFCLQ----EPDIHRIDGLKRMLK-EDGVFISVAKH 173 (262)
T ss_dssp EEEEESS----CCCHHHHHHHHTTEE-EEEEEEEEEEC
T ss_pred CEEEECC----CChHHHHHHHHHhcC-CCcEEEEEcCC
Confidence 9999872 366779999999999 99999986543
No 199
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.39 E-value=1.2e-12 Score=110.66 Aligned_cols=99 Identities=15% Similarity=0.120 Sum_probs=75.6
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcC-CcEEEEcCCHHHHHHHHcC----------------CCceEEecCCccchhhhhh
Q 024647 31 TTNHELAWDVGTGSGQAAASLSGIF-ENVIGTETSPKQIEFATKL----------------PNIRYELTSPAMSIAELEQ 93 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~----------------~~~~~~~~~~~~~~~d~~~ 93 (265)
.+.+.+|||||||+|.+++.++++. .+|++||+++.+++.|++. +++++.. +|+.+
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~-------~D~~~ 145 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI-------GDGFE 145 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE-------SCHHH
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEE-------CchHH
Confidence 3566899999999999999999883 3799999999999988742 2345555 55433
Q ss_pred c-cCCCCceeEEEeccccccCC-----hhHHHHHHHHHhcCCCcEEEEEec
Q 024647 94 N-VAAQSTVDLVTIAQAMHWFD-----LPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 94 ~-~~~~~~~Dlv~~~~~~~~~~-----~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
. +. +++||+|++....++.. ...+++++.++|+ |||++++...
T Consensus 146 ~l~~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~-pgG~lv~~~~ 194 (281)
T 1mjf_A 146 FIKN-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALN-NPGIYVTQAG 194 (281)
T ss_dssp HHHH-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred Hhcc-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcC-CCcEEEEEcC
Confidence 2 22 57899999987655431 2678999999999 9999998653
No 200
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.38 E-value=1.4e-12 Score=112.73 Aligned_cols=113 Identities=16% Similarity=0.155 Sum_probs=81.9
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC------C--CceEEecCCccchhhhhhccC----CCC
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL------P--NIRYELTSPAMSIAELEQNVA----AQS 99 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~--~~~~~~~~~~~~~~d~~~~~~----~~~ 99 (265)
.++.+|||+|||+|.++..+++.+++|+++|+|+.+++.|++. . ++.+.+ +|+.++.. ..+
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~-------~D~~~~l~~~~~~~~ 224 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWIC-------EDAMKFIQREERRGS 224 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEEC-------SCHHHHHHHHHHHTC
T ss_pred CCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEE-------CcHHHHHHHHHhcCC
Confidence 4567999999999999999999888999999999999988752 2 367777 44444321 146
Q ss_pred ceeEEEeccc----------cccC-ChhHHHHHHHHHhcCCCcEEEEEecCCCCC-ChHHHHhhc
Q 024647 100 TVDLVTIAQA----------MHWF-DLPQFYNQVKWVLKKPNGVIATWCYTVPEV-NVSVDAVFQ 152 (265)
Q Consensus 100 ~~Dlv~~~~~----------~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~-~~~~~~~~~ 152 (265)
+||+|+++.. +++. +...++.++.++|+ |||.+++.+...... ...+.+++.
T Consensus 225 ~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~Lk-pgG~lli~~~~~~~~~~~~~~~~l~ 288 (332)
T 2igt_A 225 TYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILS-PKALGLVLTAYSIRASFYSMHELMR 288 (332)
T ss_dssp CBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBC-TTCCEEEEEECCTTSCHHHHHHHHH
T ss_pred CceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcC-cCcEEEEEECCCCCCCHHHHHHHHH
Confidence 8999999542 2233 45689999999999 999977755443332 234444444
No 201
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.38 E-value=2.4e-12 Score=104.69 Aligned_cols=101 Identities=17% Similarity=0.151 Sum_probs=75.0
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc---CCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCC-CCc
Q 024647 32 TNHELAWDVGTGSGQAAASLSGI---FENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAA-QST 100 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~-~~~ 100 (265)
.++.+|||+|||+|..+..+++. ..+|+++|+++.+++.+++. .++.+..+++. ..+..++.. .++
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~---~~~~~~~~~~~~~ 133 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLAL---DSLQQIENEKYEP 133 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHH---HHHHHHHHTTCCC
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH---HHHHHHHhcCCCC
Confidence 45689999999999999999998 45899999999999988752 24788885431 001112111 267
Q ss_pred eeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 101 VDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 101 ~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
||+|++....+ +...+++++.++|+ |||.+++.+.
T Consensus 134 fD~v~~d~~~~--~~~~~l~~~~~~L~-pgG~lv~~~~ 168 (223)
T 3duw_A 134 FDFIFIDADKQ--NNPAYFEWALKLSR-PGTVIIGDNV 168 (223)
T ss_dssp CSEEEECSCGG--GHHHHHHHHHHTCC-TTCEEEEESC
T ss_pred cCEEEEcCCcH--HHHHHHHHHHHhcC-CCcEEEEeCC
Confidence 99999875422 45689999999999 9998887543
No 202
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.38 E-value=1.5e-12 Score=111.67 Aligned_cols=99 Identities=15% Similarity=0.170 Sum_probs=73.2
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC----------CCceEEecCCccchhhhhh-ccCC
Q 024647 31 TTNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL----------PNIRYELTSPAMSIAELEQ-NVAA 97 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~d~~~-~~~~ 97 (265)
.+.+.+|||||||+|.+++.++++. .+|+++|+|+.+++.|++. +++++.. +|+.. ++..
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~-------~D~~~~l~~~ 178 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC-------GDGFEFLKNH 178 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC-------SCHHHHHHHC
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEE-------ChHHHHHHhc
Confidence 4566899999999999999999874 5799999999999998852 2355555 55443 2224
Q ss_pred CCceeEEEeccccccCCh-----hHHHHHHHHHhcCCCcEEEEEe
Q 024647 98 QSTVDLVTIAQAMHWFDL-----PQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 98 ~~~~Dlv~~~~~~~~~~~-----~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
+++||+|++...-++-.. ..+++++.++|+ |||++++..
T Consensus 179 ~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lk-pgG~lv~~~ 222 (314)
T 2b2c_A 179 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALK-EDGILSSQG 222 (314)
T ss_dssp TTCEEEEEECCC-------------HHHHHHHHEE-EEEEEEEEC
T ss_pred CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcC-CCeEEEEEC
Confidence 678999999765443311 578999999999 999999865
No 203
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.38 E-value=7.1e-13 Score=115.39 Aligned_cols=97 Identities=18% Similarity=0.226 Sum_probs=78.7
Q ss_pred CCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhcc-CCCCceeE
Q 024647 34 HELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNV-AAQSTVDL 103 (265)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~-~~~~~~Dl 103 (265)
+.+|||||||+|.++..++++++ +++++|+ +.+++.+++. .++.+.. +|+.+.+ ..++.||+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~-------~d~~~~~~~~~~~~D~ 251 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFE-------KNLLDARNFEGGAADV 251 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEE-------CCTTCGGGGTTCCEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEe-------CCcccCcccCCCCccE
Confidence 68999999999999999999865 6999999 8899887742 2477777 4544443 13456999
Q ss_pred EEeccccccCCh---hHHHHHHHHHhcCCCcEEEEEecC
Q 024647 104 VTIAQAMHWFDL---PQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 104 v~~~~~~~~~~~---~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
|++..++|+++. ..+++++.++|+ |||.+++....
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~ 289 (352)
T 3mcz_A 252 VMLNDCLHYFDAREAREVIGHAAGLVK-PGGALLILTMT 289 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEE-EEEEEEEEEEC
T ss_pred EEEecccccCCHHHHHHHHHHHHHHcC-CCCEEEEEEec
Confidence 999999998843 589999999999 99999986654
No 204
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.38 E-value=1.1e-12 Score=114.09 Aligned_cols=96 Identities=10% Similarity=0.099 Sum_probs=74.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHc-----CCCceEEecCCccchhhhhhccCCCCceeEE
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATK-----LPNIRYELTSPAMSIAELEQNVAAQSTVDLV 104 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~-----~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv 104 (265)
++..+|||||||+|..+..++++++ +++++|++ .++..++. ..++.+.. +|+. .+.+ +||+|
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~~~~~~~~~~~~v~~~~-------~d~~-~~~p--~~D~v 251 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVARHRLDAPDVAGRWKVVE-------GDFL-REVP--HADVH 251 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHTTCCCCCGGGTTSEEEEE-------CCTT-TCCC--CCSEE
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhhcccccccCCCCCeEEEe-------cCCC-CCCC--CCcEE
Confidence 4567999999999999999999876 58999994 44442211 13577777 5553 2234 89999
Q ss_pred EeccccccC-Ch--hHHHHHHHHHhcCCCcEEEEEecC
Q 024647 105 TIAQAMHWF-DL--PQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 105 ~~~~~~~~~-~~--~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
++..++|++ |. ..+++++.++|| |||.|++....
T Consensus 252 ~~~~vlh~~~d~~~~~~L~~~~~~Lk-pgG~l~i~e~~ 288 (348)
T 3lst_A 252 VLKRILHNWGDEDSVRILTNCRRVMP-AHGRVLVIDAV 288 (348)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTCC-TTCEEEEEECC
T ss_pred EEehhccCCCHHHHHHHHHHHHHhcC-CCCEEEEEEec
Confidence 999999977 54 489999999999 99999987654
No 205
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.37 E-value=4e-13 Score=114.75 Aligned_cols=107 Identities=17% Similarity=0.125 Sum_probs=75.9
Q ss_pred HHHHHHHhh-CCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcC----CHHHHHHHH--cC--CCceEEecCCccchh-hh
Q 024647 22 ELFKFITSK-TTNHELAWDVGTGSGQAAASLSGIFENVIGTET----SPKQIEFAT--KL--PNIRYELTSPAMSIA-EL 91 (265)
Q Consensus 22 ~l~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~----s~~~~~~a~--~~--~~~~~~~~~~~~~~~-d~ 91 (265)
++.+.+... .+++.+|||||||+|.++..++++ .+|+|||+ ++.+++.+. .. +++.+.+ + |+
T Consensus 70 KL~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~-------~~D~ 141 (305)
T 2p41_A 70 KLRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQS-------GVDV 141 (305)
T ss_dssp HHHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEEC-------SCCT
T ss_pred HHHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEe-------cccc
Confidence 444434332 356689999999999999999998 78999999 665543221 11 4566666 4 55
Q ss_pred hhccCCCCceeEEEecccc---ccC-Chh---HHHHHHHHHhcCCCcEEEEEecC
Q 024647 92 EQNVAAQSTVDLVTIAQAM---HWF-DLP---QFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 92 ~~~~~~~~~~Dlv~~~~~~---~~~-~~~---~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
..+ +.++||+|+|..++ ||. |.. .++..+.++|| |||.|++-.+.
T Consensus 142 ~~l--~~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~Lk-pGG~~v~kv~~ 193 (305)
T 2p41_A 142 FFI--PPERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLS-NNTQFCVKVLN 193 (305)
T ss_dssp TTS--CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCC-TTCEEEEEESC
T ss_pred ccC--CcCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhC-CCCEEEEEeCC
Confidence 444 45689999998765 343 433 57889999999 99999885554
No 206
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.37 E-value=2e-12 Score=112.89 Aligned_cols=97 Identities=18% Similarity=0.193 Sum_probs=77.7
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCCCcee
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQSTVD 102 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~D 102 (265)
.+..+|||||||+|.++..+++.++ +++++|+ +.+++.+++. .++.+.. +|+.+ +++. .||
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~-------~d~~~-~~~~-~~D 251 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVE-------GDFFE-PLPR-KAD 251 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEE-------CCTTS-CCSS-CEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEe-------CCCCC-CCCC-Ccc
Confidence 4567999999999999999998875 5889999 9999988752 2678887 44433 2333 499
Q ss_pred EEEeccccccC-Ch--hHHHHHHHHHhcCCCcEEEEEecC
Q 024647 103 LVTIAQAMHWF-DL--PQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 103 lv~~~~~~~~~-~~--~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|++..++|++ +. ..+++++.++|+ |||.+++....
T Consensus 252 ~v~~~~vl~~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~ 290 (360)
T 1tw3_A 252 AIILSFVLLNWPDHDAVRILTRCAEALE-PGGRILIHERD 290 (360)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTEE-EEEEEEEEECC
T ss_pred EEEEcccccCCCHHHHHHHHHHHHHhcC-CCcEEEEEEEe
Confidence 99999999877 43 379999999999 99999986654
No 207
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.37 E-value=1.5e-12 Score=106.28 Aligned_cols=116 Identities=21% Similarity=0.291 Sum_probs=81.8
Q ss_pred CCCcHHHHHHHHhh--CCCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcC-------CCceEEecCC
Q 024647 17 PNYPEELFKFITSK--TTNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKL-------PNIRYELTSP 84 (265)
Q Consensus 17 p~y~~~l~~~l~~~--~~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~ 84 (265)
+...+....++... ..++.+|||+|||+|..+..+++.. .+|+++|+++.+++.+++. .++.+..+++
T Consensus 51 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~ 130 (229)
T 2avd_A 51 SMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPA 130 (229)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCH
Confidence 44444544444332 2456899999999999999999863 5799999999999988752 4678887543
Q ss_pred ccchhhhhhccCC--CCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 85 AMSIAELEQNVAA--QSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 85 ~~~~~d~~~~~~~--~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
. ..+..++.. .++||+|++... ..+...+++++.++|+ |||.+++.+.
T Consensus 131 ~---~~~~~~~~~~~~~~~D~v~~d~~--~~~~~~~l~~~~~~L~-pgG~lv~~~~ 180 (229)
T 2avd_A 131 L---ETLDELLAAGEAGTFDVAVVDAD--KENCSAYYERCLQLLR-PGGILAVLRV 180 (229)
T ss_dssp H---HHHHHHHHTTCTTCEEEEEECSC--STTHHHHHHHHHHHEE-EEEEEEEECC
T ss_pred H---HHHHHHHhcCCCCCccEEEECCC--HHHHHHHHHHHHHHcC-CCeEEEEECC
Confidence 1 011122111 168999998654 2255689999999999 9999988543
No 208
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.37 E-value=2.8e-12 Score=106.34 Aligned_cols=96 Identities=10% Similarity=0.121 Sum_probs=74.7
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc---CCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhc-c-C---
Q 024647 32 TNHELAWDVGTGSGQAAASLSGI---FENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQN-V-A--- 96 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~-~-~--- 96 (265)
.++.+|||||||+|..+..+++. ..+|+++|+|+.+++.|++. .++.+..+++ .+. + +
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda-------~~~l~~l~~~ 150 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPA-------LPVLDEMIKD 150 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCH-------HHHHHHHHHS
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH-------HHHHHHHHhc
Confidence 45679999999999999999987 45799999999999988752 3577777443 322 1 1
Q ss_pred --CCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 97 --AQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 97 --~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
++++||+|++.... -+...+++++.++|+ |||.+++.+
T Consensus 151 ~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lk-pGG~lv~d~ 190 (247)
T 1sui_A 151 EKNHGSYDFIFVDADK--DNYLNYHKRLIDLVK-VGGVIGYDN 190 (247)
T ss_dssp GGGTTCBSEEEECSCS--TTHHHHHHHHHHHBC-TTCCEEEEC
T ss_pred cCCCCCEEEEEEcCch--HHHHHHHHHHHHhCC-CCeEEEEec
Confidence 15789999987431 256789999999999 999998744
No 209
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.37 E-value=1.1e-12 Score=114.75 Aligned_cols=92 Identities=17% Similarity=0.112 Sum_probs=72.9
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCCCceeEE
Q 024647 33 NHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQSTVDLV 104 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv 104 (265)
++++|||||||+|.++..+++.++ +|+|||.|+ |++.|++. ..+.++. ++++++.++ +.+|+|
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~-------~~~~~~~lp-e~~Dvi 153 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLP-------GPVETVELP-EQVDAI 153 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEE-------SCTTTCCCS-SCEEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEe-------eeeeeecCC-ccccEE
Confidence 568999999999999999999987 599999996 77777651 3577777 566777655 689999
Q ss_pred Eecccc---ccC-ChhHHHHHHHHHhcCCCcEEE
Q 024647 105 TIAQAM---HWF-DLPQFYNQVKWVLKKPNGVIA 134 (265)
Q Consensus 105 ~~~~~~---~~~-~~~~~l~~~~~~Lk~pgG~l~ 134 (265)
++.+.- .+- ..+.++....+.|+ |||.++
T Consensus 154 vsE~~~~~l~~e~~l~~~l~a~~r~Lk-p~G~~i 186 (376)
T 4hc4_A 154 VSEWMGYGLLHESMLSSVLHARTKWLK-EGGLLL 186 (376)
T ss_dssp ECCCCBTTBTTTCSHHHHHHHHHHHEE-EEEEEE
T ss_pred EeecccccccccchhhhHHHHHHhhCC-CCceEC
Confidence 985533 222 45678888899999 999887
No 210
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.37 E-value=2.2e-12 Score=107.65 Aligned_cols=99 Identities=17% Similarity=0.185 Sum_probs=71.8
Q ss_pred CCeEEEEcCCc--chhHHHHHhc---CCcEEEEcCCHHHHHHHHcC------CCceEEecCCccchhhhhhcc----CC-
Q 024647 34 HELAWDVGTGS--GQAAASLSGI---FENVIGTETSPKQIEFATKL------PNIRYELTSPAMSIAELEQNV----AA- 97 (265)
Q Consensus 34 ~~~vlDvGcG~--G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~d~~~~~----~~- 97 (265)
...+||||||+ +..+..++++ .++|++||.|+.|++.|+.+ .++.+++.++ .+.. .+
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~-------~~~~~~l~~~~ 151 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADM-------LDPASILDAPE 151 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCT-------TCHHHHHTCHH
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecc-------cChhhhhcccc
Confidence 36799999997 4344555443 35799999999999998752 2477888544 3321 00
Q ss_pred -CCcee-----EEEeccccccC-C---hhHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 98 -QSTVD-----LVTIAQAMHWF-D---LPQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 98 -~~~~D-----lv~~~~~~~~~-~---~~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
.++|| .|+++.++||+ | +..+++++.+.|+ |||.|++.....
T Consensus 152 ~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~-PGG~Lvls~~~~ 203 (277)
T 3giw_A 152 LRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLP-SGSYLAMSIGTA 203 (277)
T ss_dssp HHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSC-TTCEEEEEEECC
T ss_pred cccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCC-CCcEEEEEeccC
Confidence 23344 58889999999 5 3579999999999 999999977654
No 211
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.36 E-value=3.7e-13 Score=111.33 Aligned_cols=97 Identities=19% Similarity=0.231 Sum_probs=74.6
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhc-cC----
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQN-VA---- 96 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~-~~---- 96 (265)
.++.+|||+|||+|..+..+++.. .+|+++|+++.+++.|++. .++.+..++ +.+. +.
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd-------a~~~l~~~~~~ 131 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGP-------ALDTLHSLLNE 131 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESC-------HHHHHHHHHHH
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC-------HHHHHHHHhhc
Confidence 355789999999999999999864 4799999999998877642 368888844 3332 11
Q ss_pred -CCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 97 -AQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 97 -~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.+++||+|++... .-+...+++++.++|+ |||+|++-+.
T Consensus 132 ~~~~~fD~V~~d~~--~~~~~~~l~~~~~~Lk-pGG~lv~d~~ 171 (242)
T 3r3h_A 132 GGEHQFDFIFIDAD--KTNYLNYYELALKLVT-PKGLIAIDNI 171 (242)
T ss_dssp HCSSCEEEEEEESC--GGGHHHHHHHHHHHEE-EEEEEEEECS
T ss_pred cCCCCEeEEEEcCC--hHHhHHHHHHHHHhcC-CCeEEEEECC
Confidence 1478999998753 1256678999999999 9999998443
No 212
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.35 E-value=3.8e-12 Score=107.66 Aligned_cols=109 Identities=19% Similarity=0.188 Sum_probs=80.1
Q ss_pred cHHHHHHHHhhCC--CCCeEEEEcCCcchhHHHHHhc-CCcEEEEcCCHHHHHHHHcC------C-CceEEecCCccchh
Q 024647 20 PEELFKFITSKTT--NHELAWDVGTGSGQAAASLSGI-FENVIGTETSPKQIEFATKL------P-NIRYELTSPAMSIA 89 (265)
Q Consensus 20 ~~~l~~~l~~~~~--~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~------~-~~~~~~~~~~~~~~ 89 (265)
.+.+++.+....+ ++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|++. . ++.+..+
T Consensus 108 te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~------- 180 (284)
T 1nv8_A 108 TEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKG------- 180 (284)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEES-------
T ss_pred HHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEEC-------
Confidence 4566666665442 5578999999999999999988 56899999999999998752 2 3778874
Q ss_pred hhhhccCCCCce---eEEEecccccc----------CC----------hhHHHHHHH-HHhcCCCcEEEEEec
Q 024647 90 ELEQNVAAQSTV---DLVTIAQAMHW----------FD----------LPQFYNQVK-WVLKKPNGVIATWCY 138 (265)
Q Consensus 90 d~~~~~~~~~~~---Dlv~~~~~~~~----------~~----------~~~~l~~~~-~~Lk~pgG~l~~~~~ 138 (265)
|+.+. ++ ++| |+|+++..... .+ ...+++++. +.|+ |||.+++...
T Consensus 181 D~~~~-~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~-pgG~l~~e~~ 250 (284)
T 1nv8_A 181 EFLEP-FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDT-SGKIVLMEIG 250 (284)
T ss_dssp STTGG-GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCC-TTCEEEEECC
T ss_pred cchhh-cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCC-CCCEEEEEEC
Confidence 44432 12 478 99999732110 11 227899999 9999 9999998543
No 213
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.35 E-value=1.8e-12 Score=103.72 Aligned_cols=85 Identities=16% Similarity=0.150 Sum_probs=65.6
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC-CCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL-PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.+++. .++.+.. +|+.+++ ++||+|+++..
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-------~d~~~~~---~~~D~v~~~~p 119 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMV-------ADVSEIS---GKYDTWIMNPP 119 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEE-------CCGGGCC---CCEEEEEECCC
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcCCCEEEE-------CcHHHCC---CCeeEEEECCC
Confidence 3567999999999999999998855 699999999999999863 3677777 5666653 68999999999
Q ss_pred cccCCh---hHHHHHHHHHh
Q 024647 110 MHWFDL---PQFYNQVKWVL 126 (265)
Q Consensus 110 ~~~~~~---~~~l~~~~~~L 126 (265)
+|+... ..+++++.++|
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 120 FGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp C-------CHHHHHHHHHHE
T ss_pred chhccCchhHHHHHHHHHhc
Confidence 998832 35777777766
No 214
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.34 E-value=2.8e-12 Score=108.52 Aligned_cols=105 Identities=14% Similarity=0.208 Sum_probs=79.0
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhh
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAE 90 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d 90 (265)
.+.+++.+.... .++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++. +++.+.. +|
T Consensus 13 d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~-------~D 85 (285)
T 1zq9_A 13 NPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLV-------GD 85 (285)
T ss_dssp CHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEE-------SC
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE-------cc
Confidence 456677776654 4567999999999999999999999999999999999988752 3567777 66
Q ss_pred hhhccCCCCceeEEEeccccccCChh--HHH--------------HHH--HHHhcCCCcEEE
Q 024647 91 LEQNVAAQSTVDLVTIAQAMHWFDLP--QFY--------------NQV--KWVLKKPNGVIA 134 (265)
Q Consensus 91 ~~~~~~~~~~~Dlv~~~~~~~~~~~~--~~l--------------~~~--~~~Lk~pgG~l~ 134 (265)
+.+++++ +||+|+++...||..+. .++ +++ +++|+ |||.++
T Consensus 86 ~~~~~~~--~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlk-PGg~~y 144 (285)
T 1zq9_A 86 VLKTDLP--FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAK-PGDKLY 144 (285)
T ss_dssp TTTSCCC--CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCC-TTCTTC
T ss_pred eecccch--hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcC-CCCccc
Confidence 6665544 79999999887776321 222 333 36889 999863
No 215
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.33 E-value=5.2e-12 Score=103.66 Aligned_cols=101 Identities=21% Similarity=0.305 Sum_probs=76.0
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCC--C
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQ--S 99 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~--~ 99 (265)
.++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.|++. .++.+..+++. ..+..++..+ +
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~---~~l~~l~~~~~~~ 147 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPAL---ATLEQLTQGKPLP 147 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH---HHHHHHHTSSSCC
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH---HHHHHHHhcCCCC
Confidence 355789999999999999999875 4799999999999988752 34777775431 1122333333 7
Q ss_pred ceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 100 TVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 100 ~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+||+|++.... -+...+++++.++|+ |||.+++.+.
T Consensus 148 ~fD~V~~d~~~--~~~~~~l~~~~~~Lk-pgG~lv~~~~ 183 (232)
T 3cbg_A 148 EFDLIFIDADK--RNYPRYYEIGLNLLR-RGGLMVIDNV 183 (232)
T ss_dssp CEEEEEECSCG--GGHHHHHHHHHHTEE-EEEEEEEECT
T ss_pred CcCEEEECCCH--HHHHHHHHHHHHHcC-CCeEEEEeCC
Confidence 89999987541 255789999999999 9999998543
No 216
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.33 E-value=7e-12 Score=103.25 Aligned_cols=99 Identities=10% Similarity=0.099 Sum_probs=74.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc---CCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhh-hhcc---CC
Q 024647 32 TNHELAWDVGTGSGQAAASLSGI---FENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAEL-EQNV---AA 97 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~-~~~~---~~ 97 (265)
.++.+|||+|||+|..+..+++. ..+|+++|+++.+++.|++. .++++..+++ .+. ..+. .+
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda----~~~l~~l~~~~~~ 144 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDA----MLALDNLLQGQES 144 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH----HHHHHHHHHSTTC
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH----HHHHHHHHhccCC
Confidence 45679999999999999999987 45799999999999988752 2477777543 111 1111 02
Q ss_pred CCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 98 QSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 98 ~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
.++||+|++.... -+...+++++.++|+ |||.+++.+
T Consensus 145 ~~~fD~I~~d~~~--~~~~~~l~~~~~~L~-pGG~lv~d~ 181 (237)
T 3c3y_A 145 EGSYDFGFVDADK--PNYIKYHERLMKLVK-VGGIVAYDN 181 (237)
T ss_dssp TTCEEEEEECSCG--GGHHHHHHHHHHHEE-EEEEEEEEC
T ss_pred CCCcCEEEECCch--HHHHHHHHHHHHhcC-CCeEEEEec
Confidence 5789999986321 155789999999999 999998854
No 217
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.32 E-value=3e-12 Score=105.44 Aligned_cols=100 Identities=20% Similarity=0.305 Sum_probs=74.6
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhcc------
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNV------ 95 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~------ 95 (265)
.++.+|||+|||+|..+..+++.. .+|+++|+++.+++.|++. .++.+..+++.. .+..+.
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~---~~~~~~~~~~~~ 135 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALE---TLQVLIDSKSAP 135 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH---HHHHHHHCSSCC
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH---HHHHHHhhcccc
Confidence 456899999999999999999884 5899999999999988752 237777754310 011111
Q ss_pred -----CCC--CceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 96 -----AAQ--STVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 96 -----~~~--~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
+++ ++||+|++..... +...+++++.++|+ |||.+++.+
T Consensus 136 ~~~~~f~~~~~~fD~I~~~~~~~--~~~~~l~~~~~~L~-pgG~lv~~~ 181 (239)
T 2hnk_A 136 SWASDFAFGPSSIDLFFLDADKE--NYPNYYPLILKLLK-PGGLLIADN 181 (239)
T ss_dssp GGGTTTCCSTTCEEEEEECSCGG--GHHHHHHHHHHHEE-EEEEEEEEC
T ss_pred cccccccCCCCCcCEEEEeCCHH--HHHHHHHHHHHHcC-CCeEEEEEc
Confidence 222 7899999874321 45689999999999 999999854
No 218
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.32 E-value=1.6e-12 Score=114.72 Aligned_cols=110 Identities=9% Similarity=0.024 Sum_probs=79.2
Q ss_pred HHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC-----CCceEEecCCccchhhhhhcc-CC
Q 024647 24 FKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL-----PNIRYELTSPAMSIAELEQNV-AA 97 (265)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~d~~~~~-~~ 97 (265)
..++.....++.+|||+|||+|.++..+++.+++|+++|+|+.+++.+++. ....+.. +|+.++. ..
T Consensus 205 r~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~-------~D~~~~l~~~ 277 (393)
T 4dmg_A 205 RRLFEAMVRPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLRVDIRH-------GEALPTLRGL 277 (393)
T ss_dssp HHHHHTTCCTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEE-------SCHHHHHHTC
T ss_pred HHHHHHHhcCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEE-------ccHHHHHHHh
Confidence 334444455588999999999999999999988899999999999998752 1123444 5554431 11
Q ss_pred CCceeEEEecccc-cc--------C-ChhHHHHHHHHHhcCCCcEEEEEecCCC
Q 024647 98 QSTVDLVTIAQAM-HW--------F-DLPQFYNQVKWVLKKPNGVIATWCYTVP 141 (265)
Q Consensus 98 ~~~~Dlv~~~~~~-~~--------~-~~~~~l~~~~~~Lk~pgG~l~~~~~~~~ 141 (265)
.+.||+|+++... +. . +...++..+.++|+ |||.|++......
T Consensus 278 ~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~Lk-pGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 278 EGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLA-EEGFLWLSSCSYH 330 (393)
T ss_dssp CCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEE-EEEEEEEEECCTT
T ss_pred cCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEECCCC
Confidence 3349999987532 11 1 23478889999999 9999997666533
No 219
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.31 E-value=6.3e-12 Score=110.81 Aligned_cols=110 Identities=8% Similarity=0.019 Sum_probs=78.2
Q ss_pred HHHhhCCCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC------C--CceEEecCCccchhh-hhhcc
Q 024647 26 FITSKTTNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL------P--NIRYELTSPAMSIAE-LEQNV 95 (265)
Q Consensus 26 ~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~--~~~~~~~~~~~~~~d-~~~~~ 95 (265)
++.....++.+|||+|||+|.++..+++.++ +|+++|+|+.+++.|++. . ++.+..+++ .+ +..+.
T Consensus 205 ~~~~~~~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~----~~~l~~~~ 280 (385)
T 2b78_A 205 ELINGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDV----FDYFKYAR 280 (385)
T ss_dssp HHHHTTTBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCH----HHHHHHHH
T ss_pred HHHHHhcCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCH----HHHHHHHH
Confidence 3433325668999999999999999998765 799999999999988752 2 677887443 11 11121
Q ss_pred CCCCceeEEEecccc-----ccC-C----hhHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 96 AAQSTVDLVTIAQAM-----HWF-D----LPQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 96 ~~~~~~Dlv~~~~~~-----~~~-~----~~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
...++||+|++.... +.. + ...++..+.++|+ |||.+++.+...
T Consensus 281 ~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~-pgG~l~~~~~~~ 334 (385)
T 2b78_A 281 RHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILS-ENGLIIASTNAA 334 (385)
T ss_dssp HTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEE-EEEEEEEEECCT
T ss_pred HhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCCC
Confidence 124589999986532 122 2 3356788899999 999999877653
No 220
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.31 E-value=1.2e-11 Score=106.04 Aligned_cols=100 Identities=12% Similarity=0.124 Sum_probs=76.2
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcC------CCceEEecCCccchhhhhhccCCCCcee
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKL------PNIRYELTSPAMSIAELEQNVAAQSTVD 102 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~d~~~~~~~~~~~D 102 (265)
.++.+|||+|||+|..+..+++.. .+|+|+|+|+.+++.+++. .++.+.. +|+..++..+++||
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~-------~D~~~~~~~~~~fD 189 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFH-------SSSLHIGELNVEFD 189 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEES-------SCGGGGGGGCCCEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEE-------CChhhcccccccCC
Confidence 566899999999999999999874 4799999999999988752 4667766 55555543456899
Q ss_pred EEEeccc------cccC-C----------------hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 103 LVTIAQA------MHWF-D----------------LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 103 lv~~~~~------~~~~-~----------------~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|++... ++.. + ...+++++.++|| |||.+++.+..
T Consensus 190 ~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lk-pGG~lv~stcs 248 (315)
T 1ixk_A 190 KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLK-PGGILVYSTCS 248 (315)
T ss_dssp EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEESC
T ss_pred EEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCC-CCCEEEEEeCC
Confidence 9998532 2211 1 1478999999999 99999987664
No 221
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.30 E-value=3.2e-12 Score=115.58 Aligned_cols=94 Identities=21% Similarity=0.234 Sum_probs=74.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCCCceeE
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQSTVDL 103 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dl 103 (265)
.++.+|||||||+|.++..+++.+. +|+|+|+|+ |++.|++. .++.+.. +|+.+++++ ++||+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~-------~d~~~~~~~-~~fD~ 227 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIP-------GKVEEVSLP-EQVDI 227 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEE-------SCTTTCCCS-SCEEE
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEE-------CchhhCccC-CCeEE
Confidence 3568999999999999999998764 899999998 88887642 4677877 556665544 58999
Q ss_pred EEeccccccC-C--hhHHHHHHHHHhcCCCcEEEE
Q 024647 104 VTIAQAMHWF-D--LPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 104 v~~~~~~~~~-~--~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
|+++..++.. + ....+.++.++|+ |||.+++
T Consensus 228 Ivs~~~~~~~~~e~~~~~l~~~~~~Lk-pgG~li~ 261 (480)
T 3b3j_A 228 IISEPMGYMLFNERMLESYLHAKKYLK-PSGNMFP 261 (480)
T ss_dssp EECCCCHHHHTCHHHHHHHHHGGGGEE-EEEEEES
T ss_pred EEEeCchHhcCcHHHHHHHHHHHHhcC-CCCEEEE
Confidence 9998765443 3 3457778899999 9999985
No 222
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.30 E-value=1.8e-12 Score=107.62 Aligned_cols=96 Identities=13% Similarity=0.049 Sum_probs=67.7
Q ss_pred CCCeEEEEcCCcchhHHHHHhc--CCcEEEEcCCHHHHHHHHcC------C-CceEEecCCccchhhhhhc---cCC---
Q 024647 33 NHELAWDVGTGSGQAAASLSGI--FENVIGTETSPKQIEFATKL------P-NIRYELTSPAMSIAELEQN---VAA--- 97 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~------~-~~~~~~~~~~~~~~d~~~~---~~~--- 97 (265)
++.+|||+|||+|.++..++++ ..+|+|+|+|+.|++.|++. . ++.+...+ +.+. +++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d-------~~~~~~~~~~~~~ 137 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVP-------QKTLLMDALKEES 137 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC-------TTCSSTTTSTTCC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcc-------hhhhhhhhhhccc
Confidence 4678999999999999999876 46899999999999988752 2 37777744 3331 233
Q ss_pred CCceeEEEeccccccCC----------------hhHHHHHHHHHhcCCCcEEEEE
Q 024647 98 QSTVDLVTIAQAMHWFD----------------LPQFYNQVKWVLKKPNGVIATW 136 (265)
Q Consensus 98 ~~~~Dlv~~~~~~~~~~----------------~~~~l~~~~~~Lk~pgG~l~~~ 136 (265)
+++||+|+++..+|... ...++.++.++|| |||.+.+.
T Consensus 138 ~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Lk-pgG~l~~~ 191 (254)
T 2h00_A 138 EIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMA-EGGELEFV 191 (254)
T ss_dssp SCCBSEEEECCCCC-------------------------CTTTTHH-HHTHHHHH
T ss_pred CCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEe-cCCEEEEE
Confidence 26899999997655432 1245678899999 99988654
No 223
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.29 E-value=1.1e-11 Score=108.76 Aligned_cols=97 Identities=11% Similarity=-0.011 Sum_probs=76.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcC------CCceEEecCCccchhhhhh-ccC-CCCcee
Q 024647 33 NHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKL------PNIRYELTSPAMSIAELEQ-NVA-AQSTVD 102 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~d~~~-~~~-~~~~~D 102 (265)
++.+|||+| |+|.++..++..++ +|+++|+|+.|++.|++. .++.+.. +|+.+ ++. .+++||
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~-------~D~~~~l~~~~~~~fD 243 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFT-------FDLRKPLPDYALHKFD 243 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEEC-------CCTTSCCCTTTSSCBS
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEE-------ChhhhhchhhccCCcc
Confidence 568999999 99999999998865 799999999999998752 2577776 56655 442 346899
Q ss_pred EEEeccccccCChhHHHHHHHHHhcCCCcEE-EEEec
Q 024647 103 LVTIAQAMHWFDLPQFYNQVKWVLKKPNGVI-ATWCY 138 (265)
Q Consensus 103 lv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l-~~~~~ 138 (265)
+|+++..++......+++++.++|+ |||.+ ++...
T Consensus 244 ~Vi~~~p~~~~~~~~~l~~~~~~Lk-pgG~~~~~~~~ 279 (373)
T 2qm3_A 244 TFITDPPETLEAIRAFVGRGIATLK-GPRCAGYFGIT 279 (373)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTBC-STTCEEEEEEC
T ss_pred EEEECCCCchHHHHHHHHHHHHHcc-cCCeEEEEEEe
Confidence 9999977665445789999999999 99954 44433
No 224
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.28 E-value=9.3e-12 Score=104.73 Aligned_cols=100 Identities=11% Similarity=0.130 Sum_probs=76.8
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHc------CCCceEEecCCccchhhhhhccC----CC
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATK------LPNIRYELTSPAMSIAELEQNVA----AQ 98 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~d~~~~~~----~~ 98 (265)
.++.+|||+|||+|..+..+++.. .+|+|+|+|+.+++.+++ ..++.+.. +|+..++. ..
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~-------~D~~~~~~~~~~~~ 154 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIIN-------ADMRKYKDYLLKNE 154 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE-------SCHHHHHHHHHHTT
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEe-------CChHhcchhhhhcc
Confidence 466899999999999999999853 579999999999998765 24677777 45554432 25
Q ss_pred CceeEEEeccccc------------------cC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 99 STVDLVTIAQAMH------------------WF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 99 ~~~Dlv~~~~~~~------------------~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
++||+|++..... .. ....+++++.++|| |||.+++.+..
T Consensus 155 ~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~lv~stcs 213 (274)
T 3ajd_A 155 IFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLK-KDGELVYSTCS 213 (274)
T ss_dssp CCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEE-EEEEEEEEESC
T ss_pred ccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCC-CCCEEEEEECC
Confidence 6899999874221 11 34678999999999 99999987664
No 225
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.26 E-value=1.8e-11 Score=99.47 Aligned_cols=118 Identities=14% Similarity=0.052 Sum_probs=84.4
Q ss_pred HHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhh-h
Q 024647 23 LFKFITSKTTNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAEL-E 92 (265)
Q Consensus 23 l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~-~ 92 (265)
-++.+....+++.+|||||||+|.++..+++.++ +|+++|+++.+++.|++. .++.+..+ |. +
T Consensus 5 RL~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~-------d~l~ 77 (225)
T 3kr9_A 5 RLELVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLA-------NGLA 77 (225)
T ss_dssp HHHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEEC-------SGGG
T ss_pred HHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEEC-------chhh
Confidence 3456777778888999999999999999999874 699999999999998752 24777774 43 3
Q ss_pred hccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhhcc
Q 024647 93 QNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVFQP 153 (265)
Q Consensus 93 ~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~~~ 153 (265)
.++ +.++||+|+.+..--- -...++.++.+.|+ |+|+|++.... -...+.+.+.+
T Consensus 78 ~l~-~~~~~D~IviaG~Gg~-~i~~Il~~~~~~L~-~~~~lVlq~~~---~~~~vr~~L~~ 132 (225)
T 3kr9_A 78 AFE-ETDQVSVITIAGMGGR-LIARILEEGLGKLA-NVERLILQPNN---REDDLRIWLQD 132 (225)
T ss_dssp GCC-GGGCCCEEEEEEECHH-HHHHHHHHTGGGCT-TCCEEEEEESS---CHHHHHHHHHH
T ss_pred hcc-cCcCCCEEEEcCCChH-HHHHHHHHHHHHhC-CCCEEEEECCC---CHHHHHHHHHH
Confidence 332 2236999887543110 13578889999999 99999885542 23445544433
No 226
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.26 E-value=2.3e-11 Score=99.16 Aligned_cols=118 Identities=14% Similarity=0.011 Sum_probs=84.9
Q ss_pred HHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhc
Q 024647 24 FKFITSKTTNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQN 94 (265)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~ 94 (265)
++.+..+.+++.+|+|||||+|.++..+++.++ +|+|+|+++.+++.|++. .++.+.. +|..+.
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~-------gD~l~~ 84 (230)
T 3lec_A 12 LQKVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRL-------ANGLSA 84 (230)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEE-------CSGGGG
T ss_pred HHHHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE-------Cchhhc
Confidence 446777778889999999999999999999874 699999999999999852 2477777 454444
Q ss_pred cCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhhcc
Q 024647 95 VAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVFQP 153 (265)
Q Consensus 95 ~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~~~ 153 (265)
..+.++||+|+.+...- --....+.+..+.|+ ++|.|++..... ...+++++.+
T Consensus 85 ~~~~~~~D~IviaGmGg-~lI~~IL~~~~~~l~-~~~~lIlqp~~~---~~~lr~~L~~ 138 (230)
T 3lec_A 85 FEEADNIDTITICGMGG-RLIADILNNDIDKLQ-HVKTLVLQPNNR---EDDLRKWLAA 138 (230)
T ss_dssp CCGGGCCCEEEEEEECH-HHHHHHHHHTGGGGT-TCCEEEEEESSC---HHHHHHHHHH
T ss_pred cccccccCEEEEeCCch-HHHHHHHHHHHHHhC-cCCEEEEECCCC---hHHHHHHHHH
Confidence 33434799988644211 013467888889999 999999866432 3444544433
No 227
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.25 E-value=6.9e-12 Score=110.50 Aligned_cols=100 Identities=22% Similarity=0.209 Sum_probs=77.1
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc------CCCceEEecCCccchhhhhhcc----CCCCcee
Q 024647 33 NHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK------LPNIRYELTSPAMSIAELEQNV----AAQSTVD 102 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D 102 (265)
++.+|||+|||+|.++..+++...+|+++|+|+.+++.|++ ..++.+..+ |+.++. ..+++||
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~-------d~~~~~~~~~~~~~~fD 281 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEA-------NAFDLLRRLEKEGERFD 281 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEES-------CHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEC-------CHHHHHHHHHhcCCCee
Confidence 66789999999999999999886689999999999998875 245777774 444332 1256899
Q ss_pred EEEeccccc---------cC-ChhHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 103 LVTIAQAMH---------WF-DLPQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 103 lv~~~~~~~---------~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
+|++..... .. +...++.++.++|+ |||.+++.+...
T Consensus 282 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~ 328 (382)
T 1wxx_A 282 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLK-EGGILATASCSH 328 (382)
T ss_dssp EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEE-EEEEEEEEECCT
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEECCC
Confidence 999864321 11 23568899999999 999999877653
No 228
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.25 E-value=1e-11 Score=109.84 Aligned_cols=109 Identities=17% Similarity=0.128 Sum_probs=80.7
Q ss_pred HHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC------C-CceEEecCCccchhhhhhcc
Q 024647 24 FKFITSKTTNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL------P-NIRYELTSPAMSIAELEQNV 95 (265)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~-~~~~~~~~~~~~~~d~~~~~ 95 (265)
..++....+++.+|||+|||+|.++..+++.++ +|+|+|+|+.+++.|++. . ++.+... |+.+..
T Consensus 208 ~~~~~~~~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~-------d~~~~~ 280 (396)
T 2as0_A 208 RLALEKWVQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVG-------SAFEEM 280 (396)
T ss_dssp HHHHGGGCCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-------CHHHHH
T ss_pred HHHHHHHhhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEC-------CHHHHH
Confidence 334444444778999999999999999999854 899999999999988752 2 6777774 443331
Q ss_pred ----CCCCceeEEEecccc---------ccC-ChhHHHHHHHHHhcCCCcEEEEEecCC
Q 024647 96 ----AAQSTVDLVTIAQAM---------HWF-DLPQFYNQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 96 ----~~~~~~Dlv~~~~~~---------~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
...++||+|++.... +.. +...++.++.++|+ |||.+++.+...
T Consensus 281 ~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~lv~~~~~~ 338 (396)
T 2as0_A 281 EKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVK-DGGILVTCSCSQ 338 (396)
T ss_dssp HHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEE-EEEEEEEEECCT
T ss_pred HHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEECCC
Confidence 135689999996432 111 34578899999999 999998876653
No 229
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.25 E-value=1.1e-11 Score=102.48 Aligned_cols=94 Identities=12% Similarity=0.085 Sum_probs=67.8
Q ss_pred HHHHhhhCCCCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC----CCceEEec
Q 024647 9 AKQYAETRPNYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL----PNIRYELT 82 (265)
Q Consensus 9 a~~Y~~~rp~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~ 82 (265)
...|.+... ..+.+.+.+.... .++.+|||+|||+|.++..+++++.+|+|+|+|+.|++.+++. +++.+..
T Consensus 5 ~k~~gQ~fl-~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~- 82 (244)
T 1qam_A 5 NIKHSQNFI-TSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLN- 82 (244)
T ss_dssp -----CCBC-CCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTCCSEEEEC-
T ss_pred CccCCcccc-CCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccCCCeEEEE-
Confidence 355666433 3677888887765 3567999999999999999999999999999999999998752 4566666
Q ss_pred CCccchhhhhhccCCC-CceeEEEeccccc
Q 024647 83 SPAMSIAELEQNVAAQ-STVDLVTIAQAMH 111 (265)
Q Consensus 83 ~~~~~~~d~~~~~~~~-~~~Dlv~~~~~~~ 111 (265)
+|+.++++++ ..| .|+++...+
T Consensus 83 ------~D~~~~~~~~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 83 ------KDILQFKFPKNQSY-KIFGNIPYN 105 (244)
T ss_dssp ------CCGGGCCCCSSCCC-EEEEECCGG
T ss_pred ------ChHHhCCcccCCCe-EEEEeCCcc
Confidence 6777776653 345 566665444
No 230
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.24 E-value=2.6e-11 Score=99.63 Aligned_cols=118 Identities=12% Similarity=-0.012 Sum_probs=84.1
Q ss_pred HHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhc
Q 024647 24 FKFITSKTTNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQN 94 (265)
Q Consensus 24 ~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~ 94 (265)
++.+....+++.+|||||||+|.++..+++.++ +|+|+|+++.+++.|++. ..+.+.. +|..+.
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~-------gD~l~~ 84 (244)
T 3gnl_A 12 LEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRK-------GNGLAV 84 (244)
T ss_dssp HHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEE-------CSGGGG
T ss_pred HHHHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEe-------cchhhc
Confidence 456777778889999999999999999999874 699999999999999852 2367777 444444
Q ss_pred cCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhhcc
Q 024647 95 VAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVFQP 153 (265)
Q Consensus 95 ~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~~~ 153 (265)
..++++||+|+++...- --....+.+..+.|+ ++|.|++..... ...+.+.+.+
T Consensus 85 ~~~~~~~D~IviagmGg-~lI~~IL~~~~~~L~-~~~~lIlq~~~~---~~~lr~~L~~ 138 (244)
T 3gnl_A 85 IEKKDAIDTIVIAGMGG-TLIRTILEEGAAKLA-GVTKLILQPNIA---AWQLREWSEQ 138 (244)
T ss_dssp CCGGGCCCEEEEEEECH-HHHHHHHHHTGGGGT-TCCEEEEEESSC---HHHHHHHHHH
T ss_pred cCccccccEEEEeCCch-HHHHHHHHHHHHHhC-CCCEEEEEcCCC---hHHHHHHHHH
Confidence 33333699988643211 012367888899999 899999866431 3444444433
No 231
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.24 E-value=1.7e-11 Score=104.47 Aligned_cols=86 Identities=15% Similarity=0.211 Sum_probs=64.8
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC------CCceEEecCCccchhhh
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL------PNIRYELTSPAMSIAEL 91 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~d~ 91 (265)
.+.+.+.+.... .++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++. +++.+.. +|+
T Consensus 27 ~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~-------~D~ 99 (299)
T 2h1r_A 27 NPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYE-------GDA 99 (299)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC-----------C
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEE-------Cch
Confidence 455666665543 4668999999999999999999988999999999999988752 3555555 676
Q ss_pred hhccCCCCceeEEEeccccccCC
Q 024647 92 EQNVAAQSTVDLVTIAQAMHWFD 114 (265)
Q Consensus 92 ~~~~~~~~~~Dlv~~~~~~~~~~ 114 (265)
..++. ++||+|+++...+|..
T Consensus 100 ~~~~~--~~~D~Vv~n~py~~~~ 120 (299)
T 2h1r_A 100 IKTVF--PKFDVCTANIPYKISS 120 (299)
T ss_dssp CSSCC--CCCSEEEEECCGGGHH
T ss_pred hhCCc--ccCCEEEEcCCccccc
Confidence 66643 4899999998888763
No 232
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.22 E-value=3e-11 Score=106.88 Aligned_cols=105 Identities=10% Similarity=0.083 Sum_probs=78.5
Q ss_pred HHHhhCCCCCeEEEEcCCcchhHHHHHhcC-CcEEEEcCCHHHHHHHHcC-------C-CceEEecCCccchhhhhhcc-
Q 024647 26 FITSKTTNHELAWDVGTGSGQAAASLSGIF-ENVIGTETSPKQIEFATKL-------P-NIRYELTSPAMSIAELEQNV- 95 (265)
Q Consensus 26 ~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~-------~-~~~~~~~~~~~~~~d~~~~~- 95 (265)
++... .++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++. . ++.+... |+.++.
T Consensus 214 ~l~~~-~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~-------D~~~~~~ 285 (396)
T 3c0k_A 214 ATRRY-VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRD-------DVFKLLR 285 (396)
T ss_dssp HHHHH-CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEES-------CHHHHHH
T ss_pred HHHHh-hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEEC-------CHHHHHH
Confidence 34333 566899999999999999999986 4899999999999988752 2 5677774 443331
Q ss_pred ---CCCCceeEEEecccc---------ccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 96 ---AAQSTVDLVTIAQAM---------HWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 96 ---~~~~~~Dlv~~~~~~---------~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
...++||+|++.... +.. +...++.++.++|+ |||++++.+..
T Consensus 286 ~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 341 (396)
T 3c0k_A 286 TYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLN-EGGILLTFSCS 341 (396)
T ss_dssp HHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEE-EEEEEEEEECC
T ss_pred HHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCC
Confidence 124689999997532 111 34578999999999 99999987765
No 233
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.22 E-value=3.7e-11 Score=104.02 Aligned_cols=101 Identities=16% Similarity=0.168 Sum_probs=78.8
Q ss_pred HHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCC
Q 024647 26 FITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQ 98 (265)
Q Consensus 26 ~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~ 98 (265)
++.....++.+|||+|||+|.++.. ++...+|+|+|+|+.+++.+++. .++.+.. +|+.+..
T Consensus 188 ~i~~~~~~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~-------~D~~~~~--- 256 (336)
T 2yx1_A 188 RIMKKVSLNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPIL-------SDVREVD--- 256 (336)
T ss_dssp HHHHHCCTTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE-------SCGGGCC---
T ss_pred HHHHhcCCCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE-------CChHHhc---
Confidence 3444556778999999999999999 88666899999999999988752 3577777 5555553
Q ss_pred CceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecCCC
Q 024647 99 STVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYTVP 141 (265)
Q Consensus 99 ~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~~~ 141 (265)
++||+|+++... ....++..+.++|+ |||.+++..+...
T Consensus 257 ~~fD~Vi~dpP~---~~~~~l~~~~~~L~-~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 257 VKGNRVIMNLPK---FAHKFIDKALDIVE-EGGVIHYYTIGKD 295 (336)
T ss_dssp CCEEEEEECCTT---TGGGGHHHHHHHEE-EEEEEEEEEEESS
T ss_pred CCCcEEEECCcH---hHHHHHHHHHHHcC-CCCEEEEEEeecC
Confidence 789999986421 12478999999999 9999988666543
No 234
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.22 E-value=2.2e-11 Score=103.24 Aligned_cols=87 Identities=14% Similarity=0.133 Sum_probs=71.6
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc----CCCceEEecCCccchhhhhh
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK----LPNIRYELTSPAMSIAELEQ 93 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~----~~~~~~~~~~~~~~~~d~~~ 93 (265)
.+.+++.+.... .++++|||||||+|.+|..+++.+.+|+++|+++.|++.+++ .+++.++. +|+.+
T Consensus 35 d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~~~v~vi~-------gD~l~ 107 (295)
T 3gru_A 35 DKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIW-------GDALK 107 (295)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHCSSEEEEE-------SCTTT
T ss_pred CHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccCCCeEEEE-------Cchhh
Confidence 456777777664 466899999999999999999998899999999999998875 26778887 66677
Q ss_pred ccCCCCceeEEEeccccccC
Q 024647 94 NVAAQSTVDLVTIAQAMHWF 113 (265)
Q Consensus 94 ~~~~~~~~Dlv~~~~~~~~~ 113 (265)
+++++.+||.|+++...++.
T Consensus 108 ~~~~~~~fD~Iv~NlPy~is 127 (295)
T 3gru_A 108 VDLNKLDFNKVVANLPYQIS 127 (295)
T ss_dssp SCGGGSCCSEEEEECCGGGH
T ss_pred CCcccCCccEEEEeCccccc
Confidence 66666789999999777654
No 235
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.21 E-value=2.8e-11 Score=99.42 Aligned_cols=108 Identities=13% Similarity=0.235 Sum_probs=82.6
Q ss_pred HHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC-----CCceEEecCCccchhhhhh
Q 024647 21 EELFKFITSKTTNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL-----PNIRYELTSPAMSIAELEQ 93 (265)
Q Consensus 21 ~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~d~~~ 93 (265)
+.++..+....+++.+|||||||+|-++..++... .+|+++|+++.|++.++++ .+..+.. .|...
T Consensus 120 D~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v-------~D~~~ 192 (281)
T 3lcv_B 120 DEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNV-------ADLLE 192 (281)
T ss_dssp HHHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEE-------CCTTT
T ss_pred HHHHHHHHhccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEE-------eeecc
Confidence 45556666666778899999999999999998774 3799999999999988752 2344444 34333
Q ss_pred ccCCCCceeEEEeccccccCChh---HHHHHHHHHhcCCCcEEEEEec
Q 024647 94 NVAAQSTVDLVTIAQAMHWFDLP---QFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 94 ~~~~~~~~Dlv~~~~~~~~~~~~---~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
- .+.+++|+++++-++|.++.+ ..+ ++...|+ |+|+++-...
T Consensus 193 ~-~p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~-~~~vvVSfp~ 237 (281)
T 3lcv_B 193 D-RLDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVN-SPNIVVTFPT 237 (281)
T ss_dssp S-CCCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSS-CSEEEEEEEC
T ss_pred c-CCCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhC-CCCEEEeccc
Confidence 3 367789999999999999433 455 9999999 9999886444
No 236
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.21 E-value=4.2e-11 Score=97.47 Aligned_cols=106 Identities=14% Similarity=0.129 Sum_probs=79.0
Q ss_pred HHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC-----CCceEEecCCccchhhhhhcc
Q 024647 21 EELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL-----PNIRYELTSPAMSIAELEQNV 95 (265)
Q Consensus 21 ~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~d~~~~~ 95 (265)
+.++..+... +++.+|||||||+|.++..+. ...+|+|+|+|+.|++.+++. .+..+.. .|+...+
T Consensus 94 d~fY~~i~~~-~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v-------~D~~~~~ 164 (253)
T 3frh_A 94 DTLYDFIFSA-ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKDWDFTFAL-------QDVLCAP 164 (253)
T ss_dssp HHHHHHHTSS-CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEE-------CCTTTSC
T ss_pred HHHHHHHhcC-CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEE-------eecccCC
Confidence 3445555555 667899999999999999988 555899999999999998762 3444555 4555444
Q ss_pred CCCCceeEEEeccccccCChh--HHHHHHHHHhcCCCcEEEEEe
Q 024647 96 AAQSTVDLVTIAQAMHWFDLP--QFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 96 ~~~~~~Dlv~~~~~~~~~~~~--~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
+.+++|+|++.-++|.++.. ...-++...|+ ++|+++-..
T Consensus 165 -~~~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~-~~~vvVsfP 206 (253)
T 3frh_A 165 -PAEAGDLALIFKLLPLLEREQAGSAMALLQSLN-TPRMAVSFP 206 (253)
T ss_dssp -CCCBCSEEEEESCHHHHHHHSTTHHHHHHHHCB-CSEEEEEEE
T ss_pred -CCCCcchHHHHHHHHHhhhhchhhHHHHHHHhc-CCCEEEEcC
Confidence 45699999999999988322 34448888999 898877544
No 237
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.20 E-value=1.1e-11 Score=104.00 Aligned_cols=101 Identities=14% Similarity=0.136 Sum_probs=79.5
Q ss_pred HHHhhCCCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCC
Q 024647 26 FITSKTTNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAA 97 (265)
Q Consensus 26 ~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~ 97 (265)
++.....++.+|||+|||+|.++..++++++ +|+++|+|+.+++.+++. ..+.+.+ +|..++. .
T Consensus 118 ri~~~~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~-------~D~~~~~-~ 189 (278)
T 3k6r_A 118 RMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYN-------MDNRDFP-G 189 (278)
T ss_dssp HHHHHCCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEEC-------SCTTTCC-C
T ss_pred HHHHhcCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEe-------CcHHHhc-c
Confidence 4556678889999999999999999999875 799999999999988752 2355655 5666654 5
Q ss_pred CCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 98 QSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 98 ~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.+.||.|+++.. .....++..+.++|+ +||++.+...
T Consensus 190 ~~~~D~Vi~~~p---~~~~~~l~~a~~~lk-~gG~ih~~~~ 226 (278)
T 3k6r_A 190 ENIADRILMGYV---VRTHEFIPKALSIAK-DGAIIHYHNT 226 (278)
T ss_dssp CSCEEEEEECCC---SSGGGGHHHHHHHEE-EEEEEEEEEE
T ss_pred ccCCCEEEECCC---CcHHHHHHHHHHHcC-CCCEEEEEee
Confidence 678999998742 134578999999999 9999876544
No 238
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.20 E-value=2.6e-13 Score=112.44 Aligned_cols=108 Identities=12% Similarity=0.154 Sum_probs=78.5
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC----CCceEEecCCccchhhhhhc
Q 024647 21 EELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL----PNIRYELTSPAMSIAELEQN 94 (265)
Q Consensus 21 ~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~d~~~~ 94 (265)
+.+++.+.... .++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++. .++.+.. +|+.++
T Consensus 15 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~-------~D~~~~ 87 (245)
T 1yub_A 15 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIH-------QDILQF 87 (245)
T ss_dssp TTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTTCSEEEECC-------SCCTTT
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhccCCceEEEE-------CChhhc
Confidence 34455555544 4567899999999999999999999999999999999988763 2344444 677777
Q ss_pred cCCC-CceeEEEecccc------------ccCChhHHH----HHHHHHhcCCCcEEEEEe
Q 024647 95 VAAQ-STVDLVTIAQAM------------HWFDLPQFY----NQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 95 ~~~~-~~~Dlv~~~~~~------------~~~~~~~~l----~~~~~~Lk~pgG~l~~~~ 137 (265)
+++. ++| .|+++... |+.+...++ +.+.|+|+ |||.+.+..
T Consensus 88 ~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~-~~G~l~v~~ 145 (245)
T 1yub_A 88 QFPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLD-IHRTLGLLL 145 (245)
T ss_dssp TCCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHC-GGGSHHHHT
T ss_pred CcccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhC-CCCchhhhh
Confidence 6553 678 67776422 322444555 77999999 999887643
No 239
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.19 E-value=1.8e-10 Score=100.42 Aligned_cols=96 Identities=19% Similarity=0.288 Sum_probs=76.4
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCc--EEEEcCCHHHHHHHHcC------CCceEEecCCccchhhhhhccCCCCceeEE
Q 024647 33 NHELAWDVGTGSGQAAASLSGIFEN--VIGTETSPKQIEFATKL------PNIRYELTSPAMSIAELEQNVAAQSTVDLV 104 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~~--v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv 104 (265)
...+|||||||+|.++..+++++++ ++..|. |.+++.+++. .++++.. +|+...+. ..+|++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~-------gD~~~~~~--~~~D~~ 248 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQE-------GDFFKDPL--PEADLY 248 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEE-------SCTTTSCC--CCCSEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeec-------CccccCCC--CCceEE
Confidence 4578999999999999999999885 677786 8889888752 4677777 56544333 358999
Q ss_pred EeccccccC-Ch--hHHHHHHHHHhcCCCcEEEEEecC
Q 024647 105 TIAQAMHWF-DL--PQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 105 ~~~~~~~~~-~~--~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
++..++|.. |. ..+|++++++|+ |||.+++....
T Consensus 249 ~~~~vlh~~~d~~~~~iL~~~~~al~-pgg~lli~e~~ 285 (353)
T 4a6d_A 249 ILARVLHDWADGKCSHLLERIYHTCK-PGGGILVIESL 285 (353)
T ss_dssp EEESSGGGSCHHHHHHHHHHHHHHCC-TTCEEEEEECC
T ss_pred EeeeecccCCHHHHHHHHHHHHhhCC-CCCEEEEEEee
Confidence 999999966 44 368999999999 99999987654
No 240
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.19 E-value=4.5e-11 Score=112.78 Aligned_cols=100 Identities=16% Similarity=0.075 Sum_probs=77.6
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCc-EEEEcCCHHHHHHHHcC--------CCceEEecCCccchhhhhh-ccCCCCce
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFEN-VIGTETSPKQIEFATKL--------PNIRYELTSPAMSIAELEQ-NVAAQSTV 101 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~~-v~~vD~s~~~~~~a~~~--------~~~~~~~~~~~~~~~d~~~-~~~~~~~~ 101 (265)
.++.+|||+|||+|.++..++..++. |++||+|+.+++.+++. .++.+++ +|+.+ ++...++|
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~-------~D~~~~l~~~~~~f 610 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQ-------ADCLAWLREANEQF 610 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEE-------SCHHHHHHHCCCCE
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEe-------cCHHHHHHhcCCCc
Confidence 46689999999999999999988775 99999999999998752 2577777 44444 23345789
Q ss_pred eEEEecccc-----------ccC-ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 102 DLVTIAQAM-----------HWF-DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 102 Dlv~~~~~~-----------~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
|+|+++... +.. +...++..+.++|+ |||.|++.+..
T Consensus 611 D~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~Lk-pgG~L~~s~~~ 659 (703)
T 3v97_A 611 DLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLR-AGGTIMFSNNK 659 (703)
T ss_dssp EEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEE-EEEEEEEEECC
T ss_pred cEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcC-CCcEEEEEECC
Confidence 999996521 222 45578999999999 99999986654
No 241
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.18 E-value=6.9e-11 Score=103.75 Aligned_cols=102 Identities=18% Similarity=0.137 Sum_probs=76.9
Q ss_pred CcHHHHHHHHhh-CCCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcC-------CCceEEecCCccch
Q 024647 19 YPEELFKFITSK-TTNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSI 88 (265)
Q Consensus 19 y~~~l~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~ 88 (265)
.++.+...+... ..++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.|++. .++.+.+
T Consensus 202 l~~~la~~l~~~~~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~------- 274 (373)
T 3tm4_A 202 LKASIANAMIELAELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQ------- 274 (373)
T ss_dssp CCHHHHHHHHHHHTCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEE-------
T ss_pred ccHHHHHHHHHhhcCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEE-------
Confidence 356666555433 35667899999999999999999887 899999999999998852 3567777
Q ss_pred hhhhhccCCCCceeEEEeccccccC--C-------hhHHHHHHHHHhc
Q 024647 89 AELEQNVAAQSTVDLVTIAQAMHWF--D-------LPQFYNQVKWVLK 127 (265)
Q Consensus 89 ~d~~~~~~~~~~~Dlv~~~~~~~~~--~-------~~~~l~~~~~~Lk 127 (265)
+|+.+++.++++||+|+++..++.. + ...+++++.++|.
T Consensus 275 ~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l~ 322 (373)
T 3tm4_A 275 GDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVLE 322 (373)
T ss_dssp CCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHEE
T ss_pred CChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHcC
Confidence 6677777777899999998765432 1 1456777777774
No 242
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.16 E-value=1.4e-10 Score=93.11 Aligned_cols=84 Identities=14% Similarity=0.139 Sum_probs=67.3
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcCC-----CceEEecCCccchhhhhhccCCCCceeEEEe
Q 024647 33 NHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKLP-----NIRYELTSPAMSIAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-----~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~ 106 (265)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++.. ++.+.. +|+.+++ ++||+|++
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~-------~d~~~~~---~~~D~v~~ 118 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFI-------GDVSEFN---SRVDIVIM 118 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEE-------SCGGGCC---CCCSEEEE
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEE-------CchHHcC---CCCCEEEE
Confidence 567999999999999999998865 6999999999999987521 566776 5666653 48999999
Q ss_pred ccccccCC---hhHHHHHHHHHh
Q 024647 107 AQAMHWFD---LPQFYNQVKWVL 126 (265)
Q Consensus 107 ~~~~~~~~---~~~~l~~~~~~L 126 (265)
+..+|+.. ...+++++.++|
T Consensus 119 ~~p~~~~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 119 NPPFGSQRKHADRPFLLKAFEIS 141 (207)
T ss_dssp CCCCSSSSTTTTHHHHHHHHHHC
T ss_pred cCCCccccCCchHHHHHHHHHhc
Confidence 99888763 236777777776
No 243
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.16 E-value=1.9e-10 Score=102.39 Aligned_cols=102 Identities=22% Similarity=0.275 Sum_probs=75.0
Q ss_pred HHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC---CC--ceEEecCCccchhhhhhccC
Q 024647 22 ELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL---PN--IRYELTSPAMSIAELEQNVA 96 (265)
Q Consensus 22 ~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~~--~~~~~~~~~~~~~d~~~~~~ 96 (265)
.+++++.. ..++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.|++. .+ +.+.. +|+.++.
T Consensus 280 ~l~~~~~~-~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~-------~d~~~~~- 350 (425)
T 2jjq_A 280 NLVRKVSE-LVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAEFEV-------ASDREVS- 350 (425)
T ss_dssp HHHHHHHH-HCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCEEEEE-------CCTTTCC-
T ss_pred HHHHHhhc-cCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEE-------CChHHcC-
Confidence 44555555 46678999999999999999999988999999999999998752 11 66776 5555553
Q ss_pred CCCceeEEEeccccccCCh-hHHHHHHHHHhcCCCcEEEEEe
Q 024647 97 AQSTVDLVTIAQAMHWFDL-PQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 97 ~~~~~Dlv~~~~~~~~~~~-~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
+. +||+|+++..- ... ..+++.+. .|+ |+|.+++.+
T Consensus 351 ~~-~fD~Vv~dPPr--~g~~~~~~~~l~-~l~-p~givyvsc 387 (425)
T 2jjq_A 351 VK-GFDTVIVDPPR--AGLHPRLVKRLN-REK-PGVIVYVSC 387 (425)
T ss_dssp CT-TCSEEEECCCT--TCSCHHHHHHHH-HHC-CSEEEEEES
T ss_pred cc-CCCEEEEcCCc--cchHHHHHHHHH-hcC-CCcEEEEEC
Confidence 22 89999986431 122 23555554 589 999998865
No 244
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.16 E-value=6.5e-11 Score=105.31 Aligned_cols=108 Identities=19% Similarity=0.251 Sum_probs=83.1
Q ss_pred cHHHHHHHHhhCC--CCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhc
Q 024647 20 PEELFKFITSKTT--NHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQN 94 (265)
Q Consensus 20 ~~~l~~~l~~~~~--~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 94 (265)
|+.+.+.+..... ++.+|||+|||+|.++..++++. .+++|+|+++.+++.| .++.+.. +|+...
T Consensus 24 P~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---~~~~~~~-------~D~~~~ 93 (421)
T 2ih2_A 24 PPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---PWAEGIL-------ADFLLW 93 (421)
T ss_dssp CHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---TTEEEEE-------SCGGGC
T ss_pred CHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---CCCcEEe-------CChhhc
Confidence 6788888877653 46799999999999999999863 5799999999998877 4677777 555555
Q ss_pred cCCCCceeEEEeccccccC-C---------h--------------------hHHHHHHHHHhcCCCcEEEEEecC
Q 024647 95 VAAQSTVDLVTIAQAMHWF-D---------L--------------------PQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 95 ~~~~~~~Dlv~~~~~~~~~-~---------~--------------------~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
. +.++||+|+++-.+... . . ..++..+.++|+ |||.+++..+.
T Consensus 94 ~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk-~~G~~~~i~p~ 166 (421)
T 2ih2_A 94 E-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLK-PGGVLVFVVPA 166 (421)
T ss_dssp C-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEE-EEEEEEEEEEG
T ss_pred C-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhC-CCCEEEEEECh
Confidence 3 45689999997533211 1 1 156889999999 99999987764
No 245
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.16 E-value=1e-10 Score=105.13 Aligned_cols=100 Identities=10% Similarity=0.185 Sum_probs=75.8
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHc------CCCceEEecCCccchhhhhhcc--CCCCc
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATK------LPNIRYELTSPAMSIAELEQNV--AAQST 100 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~d~~~~~--~~~~~ 100 (265)
.++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.+++ ..++.+.. +|+..++ +++++
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~-------~D~~~~~~~~~~~~ 330 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLV-------KDARKAPEIIGEEV 330 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEEC-------SCTTCCSSSSCSSC
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEE-------cChhhcchhhccCC
Confidence 466799999999999999999865 579999999999998764 24666666 5555554 34478
Q ss_pred eeEEEecc------ccccC-Ch----------------hHHHHHHHHHhcCCCcEEEEEecC
Q 024647 101 VDLVTIAQ------AMHWF-DL----------------PQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 101 ~Dlv~~~~------~~~~~-~~----------------~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
||+|++.- .++.. +. ..+++++.++|| |||.+++.++.
T Consensus 331 fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lk-pGG~lvy~tcs 391 (450)
T 2yxl_A 331 ADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVK-PGGRLLYTTCS 391 (450)
T ss_dssp EEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEE-EEEEEEEEESC
T ss_pred CCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCC
Confidence 99999732 22211 11 468999999999 99999987765
No 246
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.15 E-value=1.6e-10 Score=97.50 Aligned_cols=104 Identities=13% Similarity=0.077 Sum_probs=74.1
Q ss_pred CCCCeEEEEcC------CcchhHHHHHhc---CCcEEEEcCCHHHHHHHHcCCCceE-EecCCccchhhhhhccCCCCce
Q 024647 32 TNHELAWDVGT------GSGQAAASLSGI---FENVIGTETSPKQIEFATKLPNIRY-ELTSPAMSIAELEQNVAAQSTV 101 (265)
Q Consensus 32 ~~~~~vlDvGc------G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~ 101 (265)
+++.+|||+|| |+|. ..+++. ..+|+|+|+|+. .+++.+ .+ +|+.+++++ ++|
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------v~~v~~~i~-------gD~~~~~~~-~~f 124 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------VSDADSTLI-------GDCATVHTA-NKW 124 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------BCSSSEEEE-------SCGGGCCCS-SCE
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------CCCCEEEEE-------CccccCCcc-Ccc
Confidence 56789999999 5576 434444 357999999998 246777 77 667666543 689
Q ss_pred eEEEeccccccC-----C-------hhHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhhccc
Q 024647 102 DLVTIAQAMHWF-----D-------LPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVFQPF 154 (265)
Q Consensus 102 Dlv~~~~~~~~~-----~-------~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~~~~ 154 (265)
|+|+++...++. + ...+++++.++|| |||.|++..+.... ...+.++++++
T Consensus 125 D~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~Lk-pGG~~v~~~~~~~~-~~~l~~~l~~~ 187 (290)
T 2xyq_A 125 DLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLA-LGGSIAVKITEHSW-NADLYKLMGHF 187 (290)
T ss_dssp EEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEE-EEEEEEEEECSSSC-CHHHHHHHTTE
T ss_pred cEEEEcCCccccccccccccchHHHHHHHHHHHHHhcC-CCcEEEEEEeccCC-HHHHHHHHHHc
Confidence 999997654331 1 2378999999999 99999987665443 35666666654
No 247
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.14 E-value=1.5e-10 Score=104.56 Aligned_cols=99 Identities=14% Similarity=0.244 Sum_probs=74.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHc------CCCceEEecCCccchhhhhhccC-CCCcee
Q 024647 33 NHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATK------LPNIRYELTSPAMSIAELEQNVA-AQSTVD 102 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D 102 (265)
++.+|||+|||+|..|..+++.. ..|+++|+|+.+++.+++ ..++.+... |+..++. .+++||
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~-------D~~~~~~~~~~~fD 189 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHF-------DGRVFGAAVPEMFD 189 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECC-------CSTTHHHHSTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-------CHHHhhhhccccCC
Confidence 67899999999999999999874 479999999999998875 246777764 4444432 356899
Q ss_pred EEEecc------ccc--------cCC---------hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 103 LVTIAQ------AMH--------WFD---------LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 103 lv~~~~------~~~--------~~~---------~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|++.- .++ |-. ...++.++.++|| |||+|++.+..
T Consensus 190 ~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lk-pGG~LvysTcs 248 (479)
T 2frx_A 190 AILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALR-PGGTLVYSTCT 248 (479)
T ss_dssp EEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEESC
T ss_pred EEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcC-CCCEEEEeccc
Confidence 999842 121 110 1357899999999 99999987664
No 248
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.12 E-value=2.6e-10 Score=101.96 Aligned_cols=106 Identities=20% Similarity=0.240 Sum_probs=75.9
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc------CCCceEEecCCccchhhhh
Q 024647 21 EELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK------LPNIRYELTSPAMSIAELE 92 (265)
Q Consensus 21 ~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~d~~ 92 (265)
+.+++.+.... .++.+|||+|||+|.++..+++...+|+|+|+|+.+++.|++ ..++.+..++ +.
T Consensus 272 e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d-------~~ 344 (433)
T 1uwv_A 272 QKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHEN-------LE 344 (433)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECC-------TT
T ss_pred HHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECC-------HH
Confidence 34555555443 356789999999999999999998899999999999998875 2478888854 43
Q ss_pred h----ccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 93 Q----NVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 93 ~----~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
+ +++++++||+|+++..-.-. ..+++.+. .++ |++++++.+
T Consensus 345 ~~l~~~~~~~~~fD~Vv~dPPr~g~--~~~~~~l~-~~~-p~~ivyvsc 389 (433)
T 1uwv_A 345 EDVTKQPWAKNGFDKVLLDPARAGA--AGVMQQII-KLE-PIRIVYVSC 389 (433)
T ss_dssp SCCSSSGGGTTCCSEEEECCCTTCC--HHHHHHHH-HHC-CSEEEEEES
T ss_pred HHhhhhhhhcCCCCEEEECCCCccH--HHHHHHHH-hcC-CCeEEEEEC
Confidence 3 33455689999986432222 24555444 378 888877754
No 249
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.11 E-value=1.8e-10 Score=99.99 Aligned_cols=98 Identities=15% Similarity=0.115 Sum_probs=75.3
Q ss_pred CCCeEEEEcCCcchhHHHHHhcC-------CcEEEEcCCHHHHHHHHcC-----CCceEEecCCccchhhhhhccCCCCc
Q 024647 33 NHELAWDVGTGSGQAAASLSGIF-------ENVIGTETSPKQIEFATKL-----PNIRYELTSPAMSIAELEQNVAAQST 100 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~-------~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~ 100 (265)
++.+|||+|||+|.++..+++.. .+++|+|+++.+++.|+.. .++.+.. +|.... ...++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~-------~D~l~~-~~~~~ 201 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLH-------QDGLAN-LLVDP 201 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEE-------SCTTSC-CCCCC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEE-------CCCCCc-cccCC
Confidence 45789999999999999998765 5699999999999988751 2455665 443332 24578
Q ss_pred eeEEEeccccccC-Ch------------------hHHHHHHHHHhcCCCcEEEEEecC
Q 024647 101 VDLVTIAQAMHWF-DL------------------PQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 101 ~Dlv~~~~~~~~~-~~------------------~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
||+|+++..+++. +. ..++..+.+.|+ |||.+++..+.
T Consensus 202 fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk-~gG~~~~v~p~ 258 (344)
T 2f8l_A 202 VDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTK-PGGYLFFLVPD 258 (344)
T ss_dssp EEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEE-EEEEEEEEEEG
T ss_pred ccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhC-CCCEEEEEECc
Confidence 9999999887654 21 158999999999 99999987753
No 250
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.10 E-value=3.8e-10 Score=98.84 Aligned_cols=111 Identities=12% Similarity=0.177 Sum_probs=80.2
Q ss_pred HHHHHHHHhhCC-CCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc------CCCceEEecCCccchhhh-h
Q 024647 21 EELFKFITSKTT-NHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK------LPNIRYELTSPAMSIAEL-E 92 (265)
Q Consensus 21 ~~l~~~l~~~~~-~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~d~-~ 92 (265)
+.+++++..... .+.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++ ..++.+..++++ ++ .
T Consensus 200 ~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~----~~~~ 275 (369)
T 3bt7_A 200 IQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAE----EFTQ 275 (369)
T ss_dssp HHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSH----HHHH
T ss_pred HHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHH----HHHH
Confidence 566777766653 35789999999999999999988899999999999998875 247788876552 21 1
Q ss_pred hccCC------------CCceeEEEeccccccCChhH--HHHHHHHHhcCCCcEEEEEecCCCCC
Q 024647 93 QNVAA------------QSTVDLVTIAQAMHWFDLPQ--FYNQVKWVLKKPNGVIATWCYTVPEV 143 (265)
Q Consensus 93 ~~~~~------------~~~~Dlv~~~~~~~~~~~~~--~l~~~~~~Lk~pgG~l~~~~~~~~~~ 143 (265)
.+... +.+||+|++. |+. +..++.+.|+ ++|.+++...++.++
T Consensus 276 ~~~~~~~~~~l~~~~~~~~~fD~Vv~d-------PPr~g~~~~~~~~l~-~~g~ivyvsc~p~t~ 332 (369)
T 3bt7_A 276 AMNGVREFNRLQGIDLKSYQCETIFVD-------PPRSGLDSETEKMVQ-AYPRILYISCNPETL 332 (369)
T ss_dssp HHSSCCCCTTGGGSCGGGCCEEEEEEC-------CCTTCCCHHHHHHHT-TSSEEEEEESCHHHH
T ss_pred HHhhccccccccccccccCCCCEEEEC-------cCccccHHHHHHHHh-CCCEEEEEECCHHHH
Confidence 11110 1379999864 332 4677888999 899888766654443
No 251
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.07 E-value=2.2e-10 Score=98.94 Aligned_cols=100 Identities=15% Similarity=0.038 Sum_probs=73.8
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC-C-------------CceEEecCCccchhhhhhccC
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL-P-------------NIRYELTSPAMSIAELEQNVA 96 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-~-------------~~~~~~~~~~~~~~d~~~~~~ 96 (265)
+.+.+||+||||+|.+++.++++.+ +|++||+++.+++.|++. + +++++. +|+..+..
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~-------~Da~~~L~ 259 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLI-------EDCIPVLK 259 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEE-------SCHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEE-------CcHHHHHH
Confidence 4678999999999999999988765 699999999999999862 2 244444 55544321
Q ss_pred ----CCCceeEEEecccc-ccC-Ch-----hHHHHHH----HHHhcCCCcEEEEEecC
Q 024647 97 ----AQSTVDLVTIAQAM-HWF-DL-----PQFYNQV----KWVLKKPNGVIATWCYT 139 (265)
Q Consensus 97 ----~~~~~Dlv~~~~~~-~~~-~~-----~~~l~~~----~~~Lk~pgG~l~~~~~~ 139 (265)
..++||+|++...- ..- .+ ..+++.+ .++|+ |||++++....
T Consensus 260 ~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~-pgGilv~qs~s 316 (364)
T 2qfm_A 260 RYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLK-QDGKYFTQGNC 316 (364)
T ss_dssp HHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEE-EEEEEEEEEEE
T ss_pred hhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCC-CCcEEEEEcCC
Confidence 35789999987643 211 12 4566776 89999 99999987654
No 252
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.06 E-value=3e-10 Score=101.53 Aligned_cols=100 Identities=10% Similarity=0.148 Sum_probs=74.6
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC-----CCceEEecCCccchhhhhhcc--CCCCcee
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL-----PNIRYELTSPAMSIAELEQNV--AAQSTVD 102 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~d~~~~~--~~~~~~D 102 (265)
.++.+|||+|||+|..+..+++.+ .+|+++|+++.+++.+++. .++.+.. +|+...+ +++++||
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~-------~D~~~~~~~~~~~~fD 317 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ-------GDGRYPSQWCGEQQFD 317 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEE-------CCTTCTHHHHTTCCEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEe-------CchhhchhhcccCCCC
Confidence 466799999999999999999887 4799999999999987652 2456666 4444433 3457899
Q ss_pred EEEecc------ccccC-Ch----------------hHHHHHHHHHhcCCCcEEEEEecC
Q 024647 103 LVTIAQ------AMHWF-DL----------------PQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 103 lv~~~~------~~~~~-~~----------------~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+|++.. .++.. +. ..+++++.++|| |||.+++.+..
T Consensus 318 ~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~Lk-pGG~lvystcs 376 (429)
T 1sqg_A 318 RILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK-TGGTLVYATCS 376 (429)
T ss_dssp EEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEE-EEEEEEEEESC
T ss_pred EEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEECC
Confidence 999743 22211 11 367999999999 99999987764
No 253
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.05 E-value=2.6e-10 Score=94.78 Aligned_cols=82 Identities=17% Similarity=0.129 Sum_probs=62.9
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC----CCceEEecCCccchhhhhh
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL----PNIRYELTSPAMSIAELEQ 93 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~d~~~ 93 (265)
.+.+++.+.... .++.+|||||||+|.+|..+++++.+|+|+|+++.|++.+++. +++.++. +|+.+
T Consensus 14 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~~~v~~i~-------~D~~~ 86 (255)
T 3tqs_A 14 DSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQKNITIYQ-------NDALQ 86 (255)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTCTTEEEEE-------SCTTT
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhCCCcEEEE-------cchHh
Confidence 455666666554 4568899999999999999999999999999999999998752 5777777 55555
Q ss_pred ccCC----CCceeEEEeccc
Q 024647 94 NVAA----QSTVDLVTIAQA 109 (265)
Q Consensus 94 ~~~~----~~~~Dlv~~~~~ 109 (265)
++++ +++|| |+++..
T Consensus 87 ~~~~~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 87 FDFSSVKTDKPLR-VVGNLP 105 (255)
T ss_dssp CCGGGSCCSSCEE-EEEECC
T ss_pred CCHHHhccCCCeE-EEecCC
Confidence 5432 35688 777644
No 254
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.04 E-value=3.3e-10 Score=101.46 Aligned_cols=100 Identities=15% Similarity=0.193 Sum_probs=74.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHc------CCCceEEecCCccchhhhhhcc-CCCCce
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATK------LPNIRYELTSPAMSIAELEQNV-AAQSTV 101 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~d~~~~~-~~~~~~ 101 (265)
.++.+|||+|||+|..|..+++.. .+|+++|+|+.+++.+++ ..++.+.. +|+..+. ..+++|
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~-------~Da~~l~~~~~~~F 176 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTN-------HAPAELVPHFSGFF 176 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEEC-------CCHHHHHHHHTTCE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEe-------CCHHHhhhhccccC
Confidence 567899999999999999999863 479999999999998865 24666666 4444443 135789
Q ss_pred eEEEecccc--------------ccC-C--------hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 102 DLVTIAQAM--------------HWF-D--------LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 102 Dlv~~~~~~--------------~~~-~--------~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
|+|++.-.. +|. + ...++.++.++|| |||+|+..+..
T Consensus 177 D~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lk-pGG~LvYsTCs 236 (456)
T 3m4x_A 177 DRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLK-NKGQLIYSTCT 236 (456)
T ss_dssp EEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEE-EEEEEEEEESC
T ss_pred CEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEEee
Confidence 999985421 111 1 1167899999999 99999987664
No 255
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.04 E-value=4.8e-10 Score=93.88 Aligned_cols=85 Identities=14% Similarity=0.115 Sum_probs=66.1
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC---CCceEEecCCccchhhhhhc
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL---PNIRYELTSPAMSIAELEQN 94 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~~~~~~~~~~~~~~~d~~~~ 94 (265)
.+.+++.+.... .++ +|||||||+|.+|..+++++.+|+|+|+|+.|++.+++. .++.++. +|+.++
T Consensus 32 d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~~~v~vi~-------~D~l~~ 103 (271)
T 3fut_A 32 SEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSGLPVRLVF-------QDALLY 103 (271)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTTSSEEEEE-------SCGGGS
T ss_pred CHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCCEEEEE-------CChhhC
Confidence 455666666553 455 999999999999999999999999999999999998752 3566666 677666
Q ss_pred cCCC-CceeEEEecccccc
Q 024647 95 VAAQ-STVDLVTIAQAMHW 112 (265)
Q Consensus 95 ~~~~-~~~Dlv~~~~~~~~ 112 (265)
++++ ..+|.|+++...+.
T Consensus 104 ~~~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 104 PWEEVPQGSLLVANLPYHI 122 (271)
T ss_dssp CGGGSCTTEEEEEEECSSC
T ss_pred ChhhccCccEEEecCcccc
Confidence 5543 26899999876554
No 256
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.03 E-value=3.9e-10 Score=101.14 Aligned_cols=99 Identities=17% Similarity=0.203 Sum_probs=73.8
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcC------CCceEEecCCccchhhhhhcc-CCCCce
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKL------PNIRYELTSPAMSIAELEQNV-AAQSTV 101 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~d~~~~~-~~~~~~ 101 (265)
.++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.+++. . +.+.. +|+..++ ..+++|
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~-------~Da~~l~~~~~~~F 171 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQ-------APPRALAEAFGTYF 171 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEEC-------SCHHHHHHHHCSCE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEE-------CCHHHhhhhccccC
Confidence 467899999999999999999874 4699999999999988752 3 55555 5555543 135789
Q ss_pred eEEEeccc------cc--------cCC---------hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 102 DLVTIAQA------MH--------WFD---------LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 102 Dlv~~~~~------~~--------~~~---------~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
|+|++.-. ++ |-. ...+++++.++|| |||+|++.+..
T Consensus 172 D~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lk-pGG~LvysTCs 231 (464)
T 3m6w_A 172 HRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLG-PGGVLVYSTCT 231 (464)
T ss_dssp EEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEE-EEEEEEEEESC
T ss_pred CEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEecc
Confidence 99996321 11 110 1468899999999 99999987664
No 257
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.97 E-value=2.1e-09 Score=96.49 Aligned_cols=111 Identities=14% Similarity=0.161 Sum_probs=82.0
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhc---------------CCcEEEEcCCHHHHHHHHc------CC-
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGI---------------FENVIGTETSPKQIEFATK------LP- 75 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~---------------~~~v~~vD~s~~~~~~a~~------~~- 75 (265)
|..+++.+.... .++.+|+|.|||+|.+...++++ ..+++|+|+++.+++.|+. ..
T Consensus 156 P~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~ 235 (445)
T 2okc_A 156 PRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGT 235 (445)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCS
T ss_pred cHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCc
Confidence 677777777654 34568999999999999988764 2579999999999998874 11
Q ss_pred -CceEEecCCccchhhhhhccCCCCceeEEEeccccccC---Ch---------------hHHHHHHHHHhcCCCcEEEEE
Q 024647 76 -NIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWF---DL---------------PQFYNQVKWVLKKPNGVIATW 136 (265)
Q Consensus 76 -~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~---~~---------------~~~l~~~~~~Lk~pgG~l~~~ 136 (265)
+.++.. +|....+ ..++||+|+++..++.. +. ..+++.+.++|+ |||++++.
T Consensus 236 ~~~~i~~-------gD~l~~~-~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk-~gG~~a~V 306 (445)
T 2okc_A 236 DRSPIVC-------EDSLEKE-PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLK-TGGRAAVV 306 (445)
T ss_dssp SCCSEEE-------CCTTTSC-CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred CCCCEee-------CCCCCCc-ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhc-cCCEEEEE
Confidence 445555 4444333 23489999999765432 11 278999999999 99999887
Q ss_pred ecC
Q 024647 137 CYT 139 (265)
Q Consensus 137 ~~~ 139 (265)
.+.
T Consensus 307 ~p~ 309 (445)
T 2okc_A 307 LPD 309 (445)
T ss_dssp EEH
T ss_pred ECC
Confidence 753
No 258
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.97 E-value=6.1e-09 Score=87.63 Aligned_cols=114 Identities=15% Similarity=0.181 Sum_probs=84.1
Q ss_pred CcHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC-----------CCceEEecCCc
Q 024647 19 YPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL-----------PNIRYELTSPA 85 (265)
Q Consensus 19 y~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~~ 85 (265)
|.+.+........+.+.+||-||.|.|..++.++++. .+|+.||+++.+++.+++. ++++....++
T Consensus 69 YhE~l~h~~l~~~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg- 147 (294)
T 3o4f_A 69 YHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDG- 147 (294)
T ss_dssp HHHHHHHHHHHHSSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCT-
T ss_pred HHHHHHHHHHhhCCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechH-
Confidence 4455555444455778999999999999999999874 4799999999999988752 4566776443
Q ss_pred cchhhhhhccCCCCceeEEEeccccccC-----ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 86 MSIAELEQNVAAQSTVDLVTIAQAMHWF-----DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 86 ~~~~d~~~~~~~~~~~Dlv~~~~~~~~~-----~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
.+.+....++||+|+....-..- -...+++.+.++|+ |||+++.+...
T Consensus 148 -----~~~l~~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~-p~Gv~v~q~~s 200 (294)
T 3o4f_A 148 -----VNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLN-PGGIFVAQNGV 200 (294)
T ss_dssp -----TTTTSCSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEE-EEEEEEEEEEE
T ss_pred -----HHHHhhccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhC-CCCEEEEecCC
Confidence 12233456789999986532211 13479999999999 99999987654
No 259
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.93 E-value=9.7e-10 Score=90.86 Aligned_cols=111 Identities=13% Similarity=-0.023 Sum_probs=75.1
Q ss_pred HHHHHHHHhhC-CCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC----CCceEEecCCccchhhhhh
Q 024647 21 EELFKFITSKT-TNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL----PNIRYELTSPAMSIAELEQ 93 (265)
Q Consensus 21 ~~l~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~d~~~ 93 (265)
-+|.+...... .+..+|||+|||+|.+++.++++. ..+.|+|++..+....... .++..... +++.
T Consensus 61 ~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~-------~~dv 133 (277)
T 3evf_A 61 AKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKD-------KTDI 133 (277)
T ss_dssp HHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEEC-------SCCT
T ss_pred HHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEec-------ccee
Confidence 36666665543 566789999999999999888763 3688888885541111111 13343442 2233
Q ss_pred ccCCCCceeEEEeccccc----cCChhH---HHHHHHHHhcCCC-cEEEEEecC
Q 024647 94 NVAAQSTVDLVTIAQAMH----WFDLPQ---FYNQVKWVLKKPN-GVIATWCYT 139 (265)
Q Consensus 94 ~~~~~~~~Dlv~~~~~~~----~~~~~~---~l~~~~~~Lk~pg-G~l~~~~~~ 139 (265)
..++++++|+|+|..+.+ |.|... +++.+.++|+ || |.|++-.+.
T Consensus 134 ~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~Lk-pG~G~FV~KVf~ 186 (277)
T 3evf_A 134 HRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLA-CGVDNFCVKVLA 186 (277)
T ss_dssp TTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHT-TCCSEEEEEESC
T ss_pred hhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhC-CCCCeEEEEecC
Confidence 345678999999988666 555433 5688899999 99 999986655
No 260
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.92 E-value=8.9e-09 Score=90.74 Aligned_cols=113 Identities=17% Similarity=0.162 Sum_probs=81.6
Q ss_pred CCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCC---------------------------------------
Q 024647 18 NYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFE--------------------------------------- 56 (265)
Q Consensus 18 ~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~--------------------------------------- 56 (265)
...+.+...+.... .++..+||.+||+|.++..++....
T Consensus 184 pl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 184 PIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp SCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 34566766665554 4567899999999999988876433
Q ss_pred -cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCCCceeEEEecccccc-C----ChhHHHHHHH
Q 024647 57 -NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHW-F----DLPQFYNQVK 123 (265)
Q Consensus 57 -~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~-~----~~~~~l~~~~ 123 (265)
+|+|+|+|+.|++.|+.. .++.+.+ +|+.+++. .++||+|+++..+.. + +...++.++.
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~-------~D~~~~~~-~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg 335 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQ-------LQVADFQT-EDEYGVVVANPPYGERLEDEEAVRQLYREMG 335 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEE-------CCGGGCCC-CCCSCEEEECCCCCCSHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEE-------CChHhCCC-CCCCCEEEECCCCccccCCchhHHHHHHHHH
Confidence 499999999999998752 2467777 66677654 358999999965432 2 2335677777
Q ss_pred HHhcCC--CcEEEEEecC
Q 024647 124 WVLKKP--NGVIATWCYT 139 (265)
Q Consensus 124 ~~Lk~p--gG~l~~~~~~ 139 (265)
+.|+ + ||.+++.+..
T Consensus 336 ~~lk-~~~g~~~~iit~~ 352 (393)
T 3k0b_A 336 IVYK-RMPTWSVYVLTSY 352 (393)
T ss_dssp HHHH-TCTTCEEEEEECC
T ss_pred HHHh-cCCCCEEEEEECC
Confidence 7887 6 8888876654
No 261
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.91 E-value=1.6e-09 Score=91.20 Aligned_cols=82 Identities=9% Similarity=0.010 Sum_probs=60.9
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCc----EEEEcCCHHHHHHHHcC--CCceEEecCCccchhhh
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFEN----VIGTETSPKQIEFATKL--PNIRYELTSPAMSIAEL 91 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~----v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~~d~ 91 (265)
.+.+++.+.... .++.+|||||||+|.+|..|++++.+ |+|+|+|+.|++.+++. .++.++. +|+
T Consensus 27 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~-------~D~ 99 (279)
T 3uzu_A 27 DHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHA-------GDA 99 (279)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEE-------SCG
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEE-------CCh
Confidence 455666666553 46789999999999999999998887 99999999999999763 4667777 566
Q ss_pred hhccCCCC------ceeEEEecc
Q 024647 92 EQNVAAQS------TVDLVTIAQ 108 (265)
Q Consensus 92 ~~~~~~~~------~~Dlv~~~~ 108 (265)
.++++++- ..+.|+++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~vv~Nl 122 (279)
T 3uzu_A 100 LTFDFGSIARPGDEPSLRIIGNL 122 (279)
T ss_dssp GGCCGGGGSCSSSSCCEEEEEEC
T ss_pred hcCChhHhcccccCCceEEEEcc
Confidence 66554321 234667664
No 262
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.90 E-value=5.1e-09 Score=90.69 Aligned_cols=104 Identities=14% Similarity=0.213 Sum_probs=75.2
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc----------------CC--cEEEEcCCHHHHHHHHc-CC------CceEEecCCcc
Q 024647 32 TNHELAWDVGTGSGQAAASLSGI----------------FE--NVIGTETSPKQIEFATK-LP------NIRYELTSPAM 86 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~----------------~~--~v~~vD~s~~~~~~a~~-~~------~~~~~~~~~~~ 86 (265)
+...+|+|+||++|..|..+... .+ +|+..|........+-+ ++ +..|..+-+
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvp-- 127 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVP-- 127 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEE--
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecc--
Confidence 34467999999999888876532 12 48899999988887644 22 223444322
Q ss_pred chhhhhhccCCCCceeEEEeccccccC-Chh---------------------------------HHHHHHHHHhcCCCcE
Q 024647 87 SIAELEQNVAAQSTVDLVTIAQAMHWF-DLP---------------------------------QFYNQVKWVLKKPNGV 132 (265)
Q Consensus 87 ~~~d~~~~~~~~~~~Dlv~~~~~~~~~-~~~---------------------------------~~l~~~~~~Lk~pgG~ 132 (265)
+.+..-.+|++++|+|+++.++||+ +.+ .+|+..++.|+ |||.
T Consensus 128 --gSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~-pGG~ 204 (359)
T 1m6e_X 128 --GSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVV-PGGR 204 (359)
T ss_dssp --SCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBC-TTCE
T ss_pred --hhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCce
Confidence 4455556899999999999999998 322 23888899999 9999
Q ss_pred EEEEecCC
Q 024647 133 IATWCYTV 140 (265)
Q Consensus 133 l~~~~~~~ 140 (265)
+++...+.
T Consensus 205 mvl~~~gr 212 (359)
T 1m6e_X 205 MVLTILGR 212 (359)
T ss_dssp EEEEEEEC
T ss_pred EEEEEecC
Confidence 99866643
No 263
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.90 E-value=6.4e-09 Score=91.47 Aligned_cols=113 Identities=14% Similarity=0.134 Sum_probs=82.8
Q ss_pred CCcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcC----------------------------------------
Q 024647 18 NYPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIF---------------------------------------- 55 (265)
Q Consensus 18 ~y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~---------------------------------------- 55 (265)
...+.+...+.... .++..+||.+||+|.++..++...
T Consensus 178 pl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 178 PIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp CCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 34566777666554 356789999999999999887653
Q ss_pred CcEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCCCceeEEEecccccc-C----ChhHHHHHHH
Q 024647 56 ENVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHW-F----DLPQFYNQVK 123 (265)
Q Consensus 56 ~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~-~----~~~~~l~~~~ 123 (265)
.+|+|+|+++.|++.|+.. .++.+.+ +|+.+++. .++||+|+++-.+.. . +...+++++.
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~-------~D~~~l~~-~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg 329 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNV-------GDATQFKS-EDEFGFIITNPPYGERLEDKDSVKQLYKELG 329 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE-------CCGGGCCC-SCBSCEEEECCCCCCSHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEE-------CChhhcCc-CCCCcEEEECCCCcCccCCHHHHHHHHHHHH
Confidence 3599999999999998752 2467777 66666653 458999999876542 2 2345777888
Q ss_pred HHhcCC--CcEEEEEecC
Q 024647 124 WVLKKP--NGVIATWCYT 139 (265)
Q Consensus 124 ~~Lk~p--gG~l~~~~~~ 139 (265)
++|+ + ||.+.+.+..
T Consensus 330 ~~lk-~~~g~~~~iit~~ 346 (385)
T 3ldu_A 330 YAFR-KLKNWSYYLITSY 346 (385)
T ss_dssp HHHH-TSBSCEEEEEESC
T ss_pred HHHh-hCCCCEEEEEECC
Confidence 8888 6 8888776654
No 264
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.90 E-value=1.7e-09 Score=89.71 Aligned_cols=80 Identities=9% Similarity=-0.076 Sum_probs=57.0
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCCc--EEEEcCCHHHHHHHHcC----CCceEEecCCccchhhhh
Q 024647 21 EELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFEN--VIGTETSPKQIEFATKL----PNIRYELTSPAMSIAELE 92 (265)
Q Consensus 21 ~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~~--v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~d~~ 92 (265)
+.+.+.+.... .++.+|||||||+|.+|. +. ++++ |+++|+++.|++.+++. ++++++. +|+.
T Consensus 7 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~-------~D~~ 77 (252)
T 1qyr_A 7 QFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQ-------QDAM 77 (252)
T ss_dssp HHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEEC-------SCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEE-------Cchh
Confidence 44555555443 456789999999999999 65 5677 99999999999999863 2566666 5555
Q ss_pred hccCCC-----CceeEEEeccc
Q 024647 93 QNVAAQ-----STVDLVTIAQA 109 (265)
Q Consensus 93 ~~~~~~-----~~~Dlv~~~~~ 109 (265)
++++++ +..|.|+++..
T Consensus 78 ~~~~~~~~~~~~~~~~vvsNlP 99 (252)
T 1qyr_A 78 TFNFGELAEKMGQPLRVFGNLP 99 (252)
T ss_dssp GCCHHHHHHHHTSCEEEEEECC
T ss_pred hCCHHHhhcccCCceEEEECCC
Confidence 554321 23577887765
No 265
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.87 E-value=2.5e-09 Score=98.92 Aligned_cols=120 Identities=13% Similarity=0.149 Sum_probs=82.8
Q ss_pred hHHHHHHHHHhhhCCCCcHHHHHHHHhhCC---CCCeEEEEcCCcchhHHHHHh----cC-----------CcEEEEcCC
Q 024647 3 ELFIKQAKQYAETRPNYPEELFKFITSKTT---NHELAWDVGTGSGQAAASLSG----IF-----------ENVIGTETS 64 (265)
Q Consensus 3 ~~f~~~a~~Y~~~rp~y~~~l~~~l~~~~~---~~~~vlDvGcG~G~~~~~l~~----~~-----------~~v~~vD~s 64 (265)
+.|.++.-.|++ |-..+.+.+..... ....|||||||+|.++...+. .+ .+|+|||.|
T Consensus 380 e~fekD~vRy~~----Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEkn 455 (745)
T 3ua3_A 380 NTFEQDQIKYDV----YGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKN 455 (745)
T ss_dssp HHHHHCHHHHHH----HHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECC
T ss_pred HHHcCChhhHHH----HHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCC
Confidence 568888888888 44555555544332 246899999999999754322 11 279999999
Q ss_pred HHHHHHHHc-----C-CCceEEecCCccchhhhhhccCC-----CCceeEEEeccccccCChh---HHHHHHHHHhcCCC
Q 024647 65 PKQIEFATK-----L-PNIRYELTSPAMSIAELEQNVAA-----QSTVDLVTIAQAMHWFDLP---QFYNQVKWVLKKPN 130 (265)
Q Consensus 65 ~~~~~~a~~-----~-~~~~~~~~~~~~~~~d~~~~~~~-----~~~~Dlv~~~~~~~~~~~~---~~l~~~~~~Lk~pg 130 (265)
+..+..++. . ..++++. +|++++.++ .+.+|+|++-+.-...+.+ ..+..+.+.|| ||
T Consensus 456 p~A~~~l~~~~~Ng~~d~VtVI~-------gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lk-p~ 527 (745)
T 3ua3_A 456 PNAIVTLKYMNVRTWKRRVTIIE-------SDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLK-PT 527 (745)
T ss_dssp HHHHHHHHHHHHHTTTTCSEEEE-------SCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSC-TT
T ss_pred hHHHHHHHHHHhcCCCCeEEEEe-------CchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCC-CC
Confidence 976654432 2 3477777 566666543 5789999998754333333 67888889999 99
Q ss_pred cEEE
Q 024647 131 GVIA 134 (265)
Q Consensus 131 G~l~ 134 (265)
|+++
T Consensus 528 Gi~i 531 (745)
T 3ua3_A 528 TISI 531 (745)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 9876
No 266
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.87 E-value=1.1e-08 Score=84.54 Aligned_cols=84 Identities=13% Similarity=0.056 Sum_probs=61.1
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcC-CcEEEEcCCHHHHHHHHcC--CCceEEecCCccchhhhhhc
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIF-ENVIGTETSPKQIEFATKL--PNIRYELTSPAMSIAELEQN 94 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~~d~~~~ 94 (265)
.+.+++.+.... .++.+|||+|||+|.+|..+++++ .+|+|+|+|+.|++.+++. .+++++. +|+.++
T Consensus 16 d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~~~~~v~~i~-------~D~~~~ 88 (249)
T 3ftd_A 16 SEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSIGDERLEVIN-------EDASKF 88 (249)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTSCCTTEEEEC-------SCTTTC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhccCCCeEEEE-------cchhhC
Confidence 456677776664 356899999999999999999995 7899999999999999864 2445555 676666
Q ss_pred cCCCCc-eeEEEecccc
Q 024647 95 VAAQST-VDLVTIAQAM 110 (265)
Q Consensus 95 ~~~~~~-~Dlv~~~~~~ 110 (265)
++++.. ...|+++...
T Consensus 89 ~~~~~~~~~~vv~NlPy 105 (249)
T 3ftd_A 89 PFCSLGKELKVVGNLPY 105 (249)
T ss_dssp CGGGSCSSEEEEEECCT
T ss_pred ChhHccCCcEEEEECch
Confidence 544311 2356666443
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.87 E-value=1.6e-09 Score=90.23 Aligned_cols=75 Identities=20% Similarity=0.233 Sum_probs=56.5
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCH-------HHHHHHHcC-------CCceEEecCCccchhhhhhc-c-
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFENVIGTETSP-------KQIEFATKL-------PNIRYELTSPAMSIAELEQN-V- 95 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~-------~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~-~- 95 (265)
.++.+|||+|||+|..+..+++.+.+|+++|+|+ .+++.+++. .++.+..+ |+.++ +
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~-------d~~~~l~~ 154 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFG-------NAAEQMPA 154 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEES-------CHHHHHHH
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEEC-------CHHHHHHh
Confidence 3457899999999999999999989999999999 999888652 23778774 44442 1
Q ss_pred CCC--CceeEEEeccccccC
Q 024647 96 AAQ--STVDLVTIAQAMHWF 113 (265)
Q Consensus 96 ~~~--~~~Dlv~~~~~~~~~ 113 (265)
+++ ++||+|+++..+++.
T Consensus 155 ~~~~~~~fD~V~~dP~~~~~ 174 (258)
T 2r6z_A 155 LVKTQGKPDIVYLDPMYPER 174 (258)
T ss_dssp HHHHHCCCSEEEECCCC---
T ss_pred hhccCCCccEEEECCCCCCc
Confidence 233 689999998766543
No 268
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.85 E-value=2e-08 Score=88.23 Aligned_cols=112 Identities=14% Similarity=0.095 Sum_probs=82.0
Q ss_pred CcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcCC----------------------------------------
Q 024647 19 YPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIFE---------------------------------------- 56 (265)
Q Consensus 19 y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~~---------------------------------------- 56 (265)
..+.+...+.... .++..+||.+||+|.+...++....
T Consensus 178 l~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 257 (384)
T 3ldg_A 178 IKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQL 257 (384)
T ss_dssp CCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred CcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCc
Confidence 4566766665543 4567899999999999998875433
Q ss_pred cEEEEcCCHHHHHHHHcC-------CCceEEecCCccchhhhhhccCCCCceeEEEecccccc-C-C---hhHHHHHHHH
Q 024647 57 NVIGTETSPKQIEFATKL-------PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHW-F-D---LPQFYNQVKW 124 (265)
Q Consensus 57 ~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~-~-~---~~~~l~~~~~ 124 (265)
+|+|+|+|+.|++.|+.. ..+.+.+ +|+.+++.+ ++||+|+++-..+. + + ...+++++.+
T Consensus 258 ~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~-------~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~ 329 (384)
T 3ldg_A 258 DISGFDFDGRMVEIARKNAREVGLEDVVKLKQ-------MRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGE 329 (384)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE-------CCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEE-------CChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHH
Confidence 499999999999998752 2367777 666777543 58999999975542 2 2 3457777888
Q ss_pred HhcCC--CcEEEEEecC
Q 024647 125 VLKKP--NGVIATWCYT 139 (265)
Q Consensus 125 ~Lk~p--gG~l~~~~~~ 139 (265)
.|| + ||.+++.+..
T Consensus 330 ~lk-~~~g~~~~iit~~ 345 (384)
T 3ldg_A 330 TFA-PLKTWSQFILTND 345 (384)
T ss_dssp HHT-TCTTSEEEEEESC
T ss_pred HHh-hCCCcEEEEEECC
Confidence 887 6 8888887764
No 269
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.84 E-value=9.4e-09 Score=89.76 Aligned_cols=104 Identities=13% Similarity=0.096 Sum_probs=74.5
Q ss_pred CCeEEEEcCCcchhHHHHHhc-----------------CC--cEEEEcCC-----------HHHHHHHHc-C---CCceE
Q 024647 34 HELAWDVGTGSGQAAASLSGI-----------------FE--NVIGTETS-----------PKQIEFATK-L---PNIRY 79 (265)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~~~-----------------~~--~v~~vD~s-----------~~~~~~a~~-~---~~~~~ 79 (265)
..+|+|+||++|..|..+... .+ +|+..|+- +.+.+.+++ . .+..|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 578999999999999887643 12 37788887 666554432 1 23455
Q ss_pred EecCCccchhhhhhccCCCCceeEEEeccccccC-ChhH------------------------H---------------H
Q 024647 80 ELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWF-DLPQ------------------------F---------------Y 119 (265)
Q Consensus 80 ~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~-~~~~------------------------~---------------l 119 (265)
..+-+ +.+..-.+|++++|+|+++.++||+ +.+. + |
T Consensus 133 ~~gvp----gSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL 208 (384)
T 2efj_A 133 IGAMP----GSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFL 208 (384)
T ss_dssp EEECC----SCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecc----hhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 55544 5666666899999999999999998 4321 1 4
Q ss_pred HHHHHHhcCCCcEEEEEecCCCC
Q 024647 120 NQVKWVLKKPNGVIATWCYTVPE 142 (265)
Q Consensus 120 ~~~~~~Lk~pgG~l~~~~~~~~~ 142 (265)
+..++.|+ |||.+++...+.+.
T Consensus 209 ~~Ra~eL~-pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 209 RIHSEELI-SRGRMLLTFICKED 230 (384)
T ss_dssp HHHHHHEE-EEEEEEEEEECCCT
T ss_pred HHHHHHhc-cCCeEEEEEecCCC
Confidence 45589999 99999987776544
No 270
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.77 E-value=7.7e-09 Score=87.84 Aligned_cols=86 Identities=14% Similarity=0.217 Sum_probs=63.4
Q ss_pred hCCCCcHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC-----CCceEEecCCccc
Q 024647 15 TRPNYPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL-----PNIRYELTSPAMS 87 (265)
Q Consensus 15 ~rp~y~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~ 87 (265)
+.|...+++++.+. ..++.+|||+|||+|..+..+++++ .+|+|+|+|+.|++.|++. .++.++.++.
T Consensus 10 h~pvLl~e~l~~L~--~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~--- 84 (301)
T 1m6y_A 10 HIPVMVREVIEFLK--PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSY--- 84 (301)
T ss_dssp CCCTTHHHHHHHHC--CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCG---
T ss_pred ccHHHHHHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCH---
Confidence 45555566666553 2466899999999999999999885 5899999999999998752 4677777544
Q ss_pred hhhhhhcc--C---CCCceeEEEeccc
Q 024647 88 IAELEQNV--A---AQSTVDLVTIAQA 109 (265)
Q Consensus 88 ~~d~~~~~--~---~~~~~Dlv~~~~~ 109 (265)
.+++ + ..++||.|++...
T Consensus 85 ----~~l~~~l~~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 85 ----READFLLKTLGIEKVDGILMDLG 107 (301)
T ss_dssp ----GGHHHHHHHTTCSCEEEEEEECS
T ss_pred ----HHHHHHHHhcCCCCCCEEEEcCc
Confidence 3332 1 1257999998653
No 271
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.74 E-value=1e-08 Score=94.75 Aligned_cols=118 Identities=19% Similarity=0.339 Sum_probs=81.5
Q ss_pred hHHHHHHHHHhhhCCCCcHHHHHHHHhhC------CCCCeEEEEcCCcchhHHHHHh---cCC---cEEEEcCCHHHHHH
Q 024647 3 ELFIKQAKQYAETRPNYPEELFKFITSKT------TNHELAWDVGTGSGQAAASLSG---IFE---NVIGTETSPKQIEF 70 (265)
Q Consensus 3 ~~f~~~a~~Y~~~rp~y~~~l~~~l~~~~------~~~~~vlDvGcG~G~~~~~l~~---~~~---~v~~vD~s~~~~~~ 70 (265)
+.|+++.-.|++ |-..+.+.|.... .+..+|||||||+|.+....++ +.. +|++||.|+. ...
T Consensus 325 evFEkD~vKy~~----Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~ 399 (637)
T 4gqb_A 325 EVFEKDPIKYSQ----YQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVV 399 (637)
T ss_dssp HHHTTCHHHHHH----HHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHH
T ss_pred hhhcCChhhHHH----HHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHH
Confidence 578888889988 5556666665432 1335799999999998655543 332 5899999985 444
Q ss_pred HHcC-------CCceEEecCCccchhhhhhccCCCCceeEEEeccccccCC---hhHHHHHHHHHhcCCCcEEE
Q 024647 71 ATKL-------PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFD---LPQFYNQVKWVLKKPNGVIA 134 (265)
Q Consensus 71 a~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~---~~~~l~~~~~~Lk~pgG~l~ 134 (265)
+++. ..|+.+. +|++++.+| +++|+|++-+.-.... ...++....|.|| |||.++
T Consensus 400 a~~~v~~N~~~dkVtVI~-------gd~eev~LP-EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LK-PgGimi 464 (637)
T 4gqb_A 400 TLENWQFEEWGSQVTVVS-------SDMREWVAP-EKADIIVSELLGSFADNELSPECLDGAQHFLK-DDGVSI 464 (637)
T ss_dssp HHHHHHHHTTGGGEEEEE-------SCTTTCCCS-SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEE-EEEEEE
T ss_pred HHHHHHhccCCCeEEEEe-------CcceeccCC-cccCEEEEEcCcccccccCCHHHHHHHHHhcC-CCcEEc
Confidence 4431 3466666 777887654 7899999966332222 2357778889999 999875
No 272
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.73 E-value=6.7e-08 Score=77.00 Aligned_cols=113 Identities=8% Similarity=0.015 Sum_probs=77.4
Q ss_pred CCcHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhc-CCcEEEEcCCHHHHHHHHcC---------CCceEEecCCccc
Q 024647 18 NYPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGI-FENVIGTETSPKQIEFATKL---------PNIRYELTSPAMS 87 (265)
Q Consensus 18 ~y~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~~~ 87 (265)
.+++...++|.....+.++|||+|| |..|..+++. ..+|+.||.++.+.+.+++. .++++..+++.-.
T Consensus 15 ~v~~~~~~~L~~~l~~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~ 92 (202)
T 3cvo_A 15 TMPPAEAEALRMAYEEAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPT 92 (202)
T ss_dssp CSCHHHHHHHHHHHHHCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSB
T ss_pred cCCHHHHHHHHHHhhCCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhh
Confidence 4567777777665566789999998 4788888875 57899999999999988751 2467777554110
Q ss_pred h-----------hhhhhc-----cC-CCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 88 I-----------AELEQN-----VA-AQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 88 ~-----------~d~~~~-----~~-~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
. ..+..+ .. ..++||+|+..... ....+..+.+.|+ |||++++-+
T Consensus 93 ~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k----~~~~~~~~l~~l~-~GG~Iv~DN 154 (202)
T 3cvo_A 93 GDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF----RVGCALATAFSIT-RPVTLLFDD 154 (202)
T ss_dssp CGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSS----HHHHHHHHHHHCS-SCEEEEETT
T ss_pred hcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCC----chhHHHHHHHhcC-CCeEEEEeC
Confidence 0 001111 11 24789999987532 2366777889999 999997744
No 273
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.72 E-value=2.2e-08 Score=87.36 Aligned_cols=103 Identities=18% Similarity=0.317 Sum_probs=69.3
Q ss_pred CCeEEEEcCCcchhHHHHH--------hcC-------C--cEEEEcCCHHHHHHH-HcCC-----------------Cce
Q 024647 34 HELAWDVGTGSGQAAASLS--------GIF-------E--NVIGTETSPKQIEFA-TKLP-----------------NIR 78 (265)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~--------~~~-------~--~v~~vD~s~~~~~~a-~~~~-----------------~~~ 78 (265)
+.+|+|+|||+|..|..+. +++ + +|...|+-...-... +.++ +..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 5789999999999998873 222 2 377778776664322 1111 112
Q ss_pred EEecCCccchhhhhhccCCCCceeEEEeccccccCC-hh--------------------------------------HHH
Q 024647 79 YELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHWFD-LP--------------------------------------QFY 119 (265)
Q Consensus 79 ~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~~~-~~--------------------------------------~~l 119 (265)
|..+-+ +.+..-.+|++++|+|+++.++||+. .+ .+|
T Consensus 133 f~~gvp----gSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL 208 (374)
T 3b5i_A 133 FVAGVP----GSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFL 208 (374)
T ss_dssp EEEEEE----SCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecC----hhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHH
Confidence 222211 34444457899999999999999983 22 257
Q ss_pred HHHHHHhcCCCcEEEEEecCCC
Q 024647 120 NQVKWVLKKPNGVIATWCYTVP 141 (265)
Q Consensus 120 ~~~~~~Lk~pgG~l~~~~~~~~ 141 (265)
+..++.|+ |||.+++...+.+
T Consensus 209 ~~ra~eL~-pGG~mvl~~~gr~ 229 (374)
T 3b5i_A 209 RARAAEVK-RGGAMFLVCLGRT 229 (374)
T ss_dssp HHHHHHEE-EEEEEEEEEEECC
T ss_pred HHHHHHhC-CCCEEEEEEecCC
Confidence 78899999 9999998766543
No 274
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.71 E-value=3.4e-08 Score=85.30 Aligned_cols=88 Identities=11% Similarity=0.011 Sum_probs=67.7
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecccc
Q 024647 31 TTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAM 110 (265)
Q Consensus 31 ~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~ 110 (265)
..++++|||+||++|..|..+++++.+|+|||+.+ |-......+++.+.+ +|+.....+.+++|+|+|..+.
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~-l~~~l~~~~~V~~~~-------~d~~~~~~~~~~~D~vvsDm~~ 280 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGP-MAQSLMDTGQVTWLR-------EDGFKFRPTRSNISWMVCDMVE 280 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSC-CCHHHHTTTCEEEEC-------SCTTTCCCCSSCEEEEEECCSS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhh-cChhhccCCCeEEEe-------CccccccCCCCCcCEEEEcCCC
Confidence 46789999999999999999999999999999874 444555568899988 4545555566789999998765
Q ss_pred ccCChhHHHHHHHHHhcCCC
Q 024647 111 HWFDLPQFYNQVKWVLKKPN 130 (265)
Q Consensus 111 ~~~~~~~~l~~~~~~Lk~pg 130 (265)
+ +...+..+.+.|. .+
T Consensus 281 ~---p~~~~~l~~~wl~-~~ 296 (375)
T 4auk_A 281 K---PAKVAALMAQWLV-NG 296 (375)
T ss_dssp C---HHHHHHHHHHHHH-TT
T ss_pred C---hHHhHHHHHHHHh-cc
Confidence 4 4556666666665 44
No 275
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.71 E-value=1.1e-08 Score=84.88 Aligned_cols=89 Identities=12% Similarity=0.019 Sum_probs=61.9
Q ss_pred CeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHH-------HHcC--------CCceEEecCCccchhhhhhc-cCCC
Q 024647 35 ELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEF-------ATKL--------PNIRYELTSPAMSIAELEQN-VAAQ 98 (265)
Q Consensus 35 ~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~-------a~~~--------~~~~~~~~~~~~~~~d~~~~-~~~~ 98 (265)
.+|||+|||+|..+..++.++++|+++|+++.+++. ++.. .+++++. +|..++ +...
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~-------~D~~~~L~~~~ 162 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIH-------ASSLTALTDIT 162 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEE-------SCHHHHSTTCS
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEE-------CCHHHHHHhCc
Confidence 789999999999999999999999999999976433 3211 2355666 554443 2122
Q ss_pred CceeEEEeccccccCChhHHHHHHHHHhcCCCc
Q 024647 99 STVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNG 131 (265)
Q Consensus 99 ~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG 131 (265)
++||+|++...+++-.....+++..++|+ +.+
T Consensus 163 ~~fDvV~lDP~y~~~~~saavkk~~~~lr-~l~ 194 (258)
T 2oyr_A 163 PRPQVVYLDPMFPHKQKSALVKKEMRVFQ-SLV 194 (258)
T ss_dssp SCCSEEEECCCCCCCCC-----HHHHHHH-HHS
T ss_pred ccCCEEEEcCCCCCcccchHHHHHHHHHH-Hhh
Confidence 47999999988776543457778888888 555
No 276
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.71 E-value=3.1e-08 Score=86.99 Aligned_cols=94 Identities=18% Similarity=0.117 Sum_probs=71.6
Q ss_pred CCCeEEEEcCCcchhHHHHHhc--C-CcEEEEcCCHHHHHHHHcC------CC--ceEEecCCccchhhhhhcc--CCCC
Q 024647 33 NHELAWDVGTGSGQAAASLSGI--F-ENVIGTETSPKQIEFATKL------PN--IRYELTSPAMSIAELEQNV--AAQS 99 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~--~-~~v~~vD~s~~~~~~a~~~------~~--~~~~~~~~~~~~~d~~~~~--~~~~ 99 (265)
++.+|||++||+|.++..++.+ + .+|+++|+++.+++.+++. .+ +.+.. +|+..+. ...+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~-------~Da~~~l~~~~~~ 124 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHG-------MEANFFLRKEWGF 124 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC-------SCHHHHHHSCCSS
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEe-------CCHHHHHHHhhCC
Confidence 4678999999999999999985 3 4799999999999988752 23 55665 4443331 1245
Q ss_pred ceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 100 TVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 100 ~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
.||+|++.- +-.+..+++.+.+.|+ |||.|++.+
T Consensus 125 ~fD~V~lDP---~g~~~~~l~~a~~~Lk-~gGll~~t~ 158 (392)
T 3axs_A 125 GFDYVDLDP---FGTPVPFIESVALSMK-RGGILSLTA 158 (392)
T ss_dssp CEEEEEECC---SSCCHHHHHHHHHHEE-EEEEEEEEE
T ss_pred CCcEEEECC---CcCHHHHHHHHHHHhC-CCCEEEEEe
Confidence 799999875 1234579999999999 999888765
No 277
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.70 E-value=2.9e-08 Score=86.96 Aligned_cols=94 Identities=12% Similarity=0.137 Sum_probs=70.4
Q ss_pred CCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHcC---C---------------C---ceEEecCCccchh
Q 024647 33 NHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATKL---P---------------N---IRYELTSPAMSIA 89 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~---~---------------~---~~~~~~~~~~~~~ 89 (265)
++.+|||+|||+|..+..++++. .+|+++|+++.+++.+++. . + +.+.. +
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~-------~ 119 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINH-------D 119 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEE-------S
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEc-------C
Confidence 56789999999999999999873 4799999999999988752 1 2 34444 5
Q ss_pred hhhhcc-CCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 90 ELEQNV-AAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 90 d~~~~~-~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
|+..+. ...+.||+|+..- ......+++.+.+.|+ |||.+++.+
T Consensus 120 Da~~~~~~~~~~fD~I~lDP---~~~~~~~l~~a~~~lk-~gG~l~vt~ 164 (378)
T 2dul_A 120 DANRLMAERHRYFHFIDLDP---FGSPMEFLDTALRSAK-RRGILGVTA 164 (378)
T ss_dssp CHHHHHHHSTTCEEEEEECC---SSCCHHHHHHHHHHEE-EEEEEEEEE
T ss_pred cHHHHHHhccCCCCEEEeCC---CCCHHHHHHHHHHhcC-CCCEEEEEe
Confidence 554432 1135799999653 1244689999999999 999887754
No 278
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.70 E-value=8.1e-09 Score=85.46 Aligned_cols=112 Identities=11% Similarity=-0.043 Sum_probs=75.1
Q ss_pred cHHHHHHHHhhC-CCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHc----CCCceEEecCCccchhhhh
Q 024647 20 PEELFKFITSKT-TNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATK----LPNIRYELTSPAMSIAELE 92 (265)
Q Consensus 20 ~~~l~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~----~~~~~~~~~~~~~~~~d~~ 92 (265)
.-+|.++...+. .+..+|||||||+|.+++.+++... .|+|+|++..+...+.. ..++....... |+.
T Consensus 76 AfKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~-----dv~ 150 (282)
T 3gcz_A 76 SAKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKT-----DVF 150 (282)
T ss_dssp HHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSC-----CGG
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCc-----chh
Confidence 336776666553 5667999999999999998886533 68999998765332221 01222222211 222
Q ss_pred hccCCCCceeEEEeccccc----cCChh---HHHHHHHHHhcCCC--cEEEEEecC
Q 024647 93 QNVAAQSTVDLVTIAQAMH----WFDLP---QFYNQVKWVLKKPN--GVIATWCYT 139 (265)
Q Consensus 93 ~~~~~~~~~Dlv~~~~~~~----~~~~~---~~l~~~~~~Lk~pg--G~l~~~~~~ 139 (265)
.++.+++|+|+|..+.+ +.|.. .+++-+.++|+ || |.|++-.+.
T Consensus 151 --~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk-~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 151 --NMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQ-EGNYTEFCIKVLC 203 (282)
T ss_dssp --GSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHH-HHCCCEEEEEESC
T ss_pred --hcCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcC-CCCCCcEEEEEec
Confidence 24668899999988776 33332 35777889999 99 999986665
No 279
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.70 E-value=3.5e-08 Score=90.50 Aligned_cols=112 Identities=17% Similarity=0.132 Sum_probs=79.4
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcC--------------------CcEEEEcCCHHHHHHHHc----
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIF--------------------ENVIGTETSPKQIEFATK---- 73 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~--------------------~~v~~vD~s~~~~~~a~~---- 73 (265)
|..+++.+.... .++.+|+|.+||+|.+...+++.. .+++|+|+++.+++.|+.
T Consensus 154 P~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l 233 (541)
T 2ar0_A 154 PRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLL 233 (541)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHH
Confidence 566666666554 345689999999999988876542 369999999999998874
Q ss_pred --CCC-----ceEEecCCccchhhhhhc-cCCCCceeEEEeccccccC-C--------------hhHHHHHHHHHhcCCC
Q 024647 74 --LPN-----IRYELTSPAMSIAELEQN-VAAQSTVDLVTIAQAMHWF-D--------------LPQFYNQVKWVLKKPN 130 (265)
Q Consensus 74 --~~~-----~~~~~~~~~~~~~d~~~~-~~~~~~~Dlv~~~~~~~~~-~--------------~~~~l~~~~~~Lk~pg 130 (265)
..+ ..+..+ |.-.. +...++||+|+++..+... . ...++..+.+.|+ ||
T Consensus 234 ~gi~~~~~~~~~I~~g-------DtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk-~g 305 (541)
T 2ar0_A 234 HDIEGNLDHGGAIRLG-------NTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLH-PG 305 (541)
T ss_dssp TTCCCBGGGTBSEEES-------CTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEE-EE
T ss_pred hCCCccccccCCeEeC-------CCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhC-CC
Confidence 122 455553 32211 1234689999998755432 1 1268999999999 99
Q ss_pred cEEEEEecC
Q 024647 131 GVIATWCYT 139 (265)
Q Consensus 131 G~l~~~~~~ 139 (265)
|++++..+.
T Consensus 306 Gr~a~V~p~ 314 (541)
T 2ar0_A 306 GRAAVVVPD 314 (541)
T ss_dssp EEEEEEEEH
T ss_pred CEEEEEecC
Confidence 999987664
No 280
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.62 E-value=2.5e-08 Score=87.84 Aligned_cols=70 Identities=11% Similarity=0.043 Sum_probs=54.9
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC--------CCceEEecCCccchhhhhhc-c-CCCCce
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL--------PNIRYELTSPAMSIAELEQN-V-AAQSTV 101 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--------~~~~~~~~~~~~~~~d~~~~-~-~~~~~~ 101 (265)
.++.+|||+|||+|..+..+++.+.+|+++|+|+.|++.|+.. .++.+.+ +|+.+. + .++++|
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~-------~Da~~~L~~~~~~~f 164 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILT-------GDFKEYLPLIKTFHP 164 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEE-------SCGGGSHHHHHHHCC
T ss_pred CCCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEE-------CcHHHhhhhccCCCc
Confidence 4478999999999999999999999999999999999988752 2466776 454442 1 123579
Q ss_pred eEEEecc
Q 024647 102 DLVTIAQ 108 (265)
Q Consensus 102 Dlv~~~~ 108 (265)
|+|+++-
T Consensus 165 DvV~lDP 171 (410)
T 3ll7_A 165 DYIYVDP 171 (410)
T ss_dssp SEEEECC
T ss_pred eEEEECC
Confidence 9999964
No 281
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.59 E-value=1.9e-07 Score=79.64 Aligned_cols=69 Identities=7% Similarity=0.158 Sum_probs=53.3
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHc------CCCceEEecCCccchhhhhhccCCC---C
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATK------LPNIRYELTSPAMSIAELEQNVAAQ---S 99 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~d~~~~~~~~---~ 99 (265)
.++.+|||+|||+|..|..+++.. .+|+++|+++.+++.+++ ..++.+.. +|+..+.... +
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~-------~D~~~~~~~~~~~~ 173 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAE-------EDFLAVSPSDPRYH 173 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE-------CCGGGSCTTCGGGT
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEe-------CChHhcCccccccC
Confidence 467899999999999999999863 579999999999998774 24677776 5555543221 5
Q ss_pred ceeEEEec
Q 024647 100 TVDLVTIA 107 (265)
Q Consensus 100 ~~Dlv~~~ 107 (265)
+||.|++.
T Consensus 174 ~fD~Vl~D 181 (309)
T 2b9e_A 174 EVHYILLD 181 (309)
T ss_dssp TEEEEEEC
T ss_pred CCCEEEEc
Confidence 79999973
No 282
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.53 E-value=4.9e-07 Score=85.07 Aligned_cols=112 Identities=18% Similarity=0.144 Sum_probs=77.9
Q ss_pred cHHHHHHHHhh----C----CCCCeEEEEcCCcchhHHHHHhcCC-----cEEEEcCCHHHHHHH--Hc---C-------
Q 024647 20 PEELFKFITSK----T----TNHELAWDVGTGSGQAAASLSGIFE-----NVIGTETSPKQIEFA--TK---L------- 74 (265)
Q Consensus 20 ~~~l~~~l~~~----~----~~~~~vlDvGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a--~~---~------- 74 (265)
|+.+...+... . +++.+|||.|||+|.+...++++.. +++|+|+++.+++.| +. .
T Consensus 300 P~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi 379 (878)
T 3s1s_A 300 DIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSN 379 (878)
T ss_dssp CHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTT
T ss_pred CHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCC
Confidence 67777776554 2 2467999999999999999988763 599999999999988 31 0
Q ss_pred CCceEEecCCccchhhhhhc-cCCCCceeEEEeccccc--cCC----------------------------hhHHHHHHH
Q 024647 75 PNIRYELTSPAMSIAELEQN-VAAQSTVDLVTIAQAMH--WFD----------------------------LPQFYNQVK 123 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~d~~~~-~~~~~~~Dlv~~~~~~~--~~~----------------------------~~~~l~~~~ 123 (265)
.+..+.. .|+... ....+.||+|+++-.+- +.. ...++..+.
T Consensus 380 ~~~~I~~-------dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al 452 (878)
T 3s1s_A 380 NAPTITG-------EDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVT 452 (878)
T ss_dssp BCCEEEC-------CCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHH
T ss_pred CcceEEe-------cchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHH
Confidence 1112222 333331 12346899999987551 111 123788899
Q ss_pred HHhcCCCcEEEEEecC
Q 024647 124 WVLKKPNGVIATWCYT 139 (265)
Q Consensus 124 ~~Lk~pgG~l~~~~~~ 139 (265)
+.|+ |||.++++.+.
T Consensus 453 ~lLK-pGGrLAfIlP~ 467 (878)
T 3s1s_A 453 ELVQ-DGTVISAIMPK 467 (878)
T ss_dssp HHSC-TTCEEEEEEET
T ss_pred HhcC-CCcEEEEEECh
Confidence 9999 99999988775
No 283
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.51 E-value=1.1e-07 Score=70.92 Aligned_cols=98 Identities=10% Similarity=0.025 Sum_probs=63.5
Q ss_pred HHHHHHHHhhCCCCCeEEEEcCCcc-hhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCC-
Q 024647 21 EELFKFITSKTTNHELAWDVGTGSG-QAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAA- 97 (265)
Q Consensus 21 ~~l~~~l~~~~~~~~~vlDvGcG~G-~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~- 97 (265)
+.+.++|.....++.+|||||||+| ..+..|++ .+.+|+++|+++..++ ++. +|+-+....
T Consensus 23 e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~---------~v~-------dDiF~P~~~~ 86 (153)
T 2k4m_A 23 NDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG---------IVR-------DDITSPRMEI 86 (153)
T ss_dssp HHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT---------EEC-------CCSSSCCHHH
T ss_pred HHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc---------eEE-------ccCCCCcccc
Confidence 4566666666666789999999999 69999997 7889999999998655 555 333221111
Q ss_pred CCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 98 QSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 98 ~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
-+.||+|.+...= .+....+-++++. -|.-+++....
T Consensus 87 Y~~~DLIYsirPP--~El~~~i~~lA~~---v~adliI~pL~ 123 (153)
T 2k4m_A 87 YRGAALIYSIRPP--AEIHSSLMRVADA---VGARLIIKPLT 123 (153)
T ss_dssp HTTEEEEEEESCC--TTTHHHHHHHHHH---HTCEEEEECBT
T ss_pred cCCcCEEEEcCCC--HHHHHHHHHHHHH---cCCCEEEEcCC
Confidence 1379999874210 0333445555553 35567665544
No 284
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.46 E-value=6.8e-07 Score=84.37 Aligned_cols=113 Identities=13% Similarity=0.093 Sum_probs=76.6
Q ss_pred CcHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhcC-----------------------------------------
Q 024647 19 YPEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGIF----------------------------------------- 55 (265)
Q Consensus 19 y~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~~----------------------------------------- 55 (265)
..+.+...+.... .++..+||.+||+|.+...++...
T Consensus 174 l~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~ 253 (703)
T 3v97_A 174 IKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLA 253 (703)
T ss_dssp SCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccc
Confidence 3566666665554 356789999999999998876532
Q ss_pred ---CcEEEEcCCHHHHHHHHcC------C-CceEEecCCccchhhhhhccCC--CCceeEEEecccccc-C-C---hhHH
Q 024647 56 ---ENVIGTETSPKQIEFATKL------P-NIRYELTSPAMSIAELEQNVAA--QSTVDLVTIAQAMHW-F-D---LPQF 118 (265)
Q Consensus 56 ---~~v~~vD~s~~~~~~a~~~------~-~~~~~~~~~~~~~~d~~~~~~~--~~~~Dlv~~~~~~~~-~-~---~~~~ 118 (265)
.+|+|+|+++.|++.|+.. . .+.+.+ +|+.++..+ .++||+|+++-.... + + ...+
T Consensus 254 ~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~-------~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~l 326 (703)
T 3v97_A 254 EYSSHFYGSDSDARVIQRARTNARLAGIGELITFEV-------KDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIAL 326 (703)
T ss_dssp HCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE-------CCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHH
T ss_pred cCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEE-------CChhhCccccccCCCCEEEeCCCccccccchhHHHHH
Confidence 3699999999999998752 2 266777 555555322 348999999965432 1 2 2233
Q ss_pred ---HHHHHHHhcCCCcEEEEEecC
Q 024647 119 ---YNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 119 ---l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+.++.+.+. |||.+++.+..
T Consensus 327 y~~l~~~lk~~~-~g~~~~ilt~~ 349 (703)
T 3v97_A 327 HSLLGRIMKNQF-GGWNLSLFSAS 349 (703)
T ss_dssp HHHHHHHHHHHC-TTCEEEEEESC
T ss_pred HHHHHHHHHhhC-CCCeEEEEeCC
Confidence 444455566 79999887653
No 285
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.46 E-value=1.3e-07 Score=86.55 Aligned_cols=116 Identities=18% Similarity=0.255 Sum_probs=78.5
Q ss_pred cHHHHHHHHhhCC-CCCeEEEEcCCcchhHHHHHhc-----------------CCcEEEEcCCHHHHHHHHcC---CCce
Q 024647 20 PEELFKFITSKTT-NHELAWDVGTGSGQAAASLSGI-----------------FENVIGTETSPKQIEFATKL---PNIR 78 (265)
Q Consensus 20 ~~~l~~~l~~~~~-~~~~vlDvGcG~G~~~~~l~~~-----------------~~~v~~vD~s~~~~~~a~~~---~~~~ 78 (265)
|..+++.+..... ...+|+|.+||+|.+...+++. ..+++|+|+++.+++.|+.. .++.
T Consensus 230 P~~Vv~lmv~ll~p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~ 309 (544)
T 3khk_A 230 PKSIVTLIVEMLEPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGID 309 (544)
T ss_dssp CHHHHHHHHHHHCCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHhcCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 6777777776653 3458999999999988876542 23699999999999988741 1221
Q ss_pred EEecCCccchhhhhhcc-CCCCceeEEEeccccc---cCC----------------------h-----hHHHHHHHHHhc
Q 024647 79 YELTSPAMSIAELEQNV-AAQSTVDLVTIAQAMH---WFD----------------------L-----PQFYNQVKWVLK 127 (265)
Q Consensus 79 ~~~~~~~~~~~d~~~~~-~~~~~~Dlv~~~~~~~---~~~----------------------~-----~~~l~~~~~~Lk 127 (265)
. +..+..+|.-..+ .+...||+|+++-.+. |.. + -.++..+.+.|+
T Consensus 310 ~---~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk 386 (544)
T 3khk_A 310 F---NFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLA 386 (544)
T ss_dssp C---BCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEE
T ss_pred c---ccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhc
Confidence 1 1111234432222 3457899999987543 210 0 158999999999
Q ss_pred CCCcEEEEEecC
Q 024647 128 KPNGVIATWCYT 139 (265)
Q Consensus 128 ~pgG~l~~~~~~ 139 (265)
|||+++++.+.
T Consensus 387 -~gGr~aiVlP~ 397 (544)
T 3khk_A 387 -PTGSMALLLAN 397 (544)
T ss_dssp -EEEEEEEEEET
T ss_pred -cCceEEEEecc
Confidence 99999987764
No 286
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.40 E-value=3.7e-07 Score=76.09 Aligned_cols=111 Identities=10% Similarity=-0.052 Sum_probs=72.5
Q ss_pred HHHHHHHHhh-CCCCCeEEEEcCCcchhHHHHHhcC--CcEEEEcCCHHHHHHHHc----CCCceEEecCCccchhhhhh
Q 024647 21 EELFKFITSK-TTNHELAWDVGTGSGQAAASLSGIF--ENVIGTETSPKQIEFATK----LPNIRYELTSPAMSIAELEQ 93 (265)
Q Consensus 21 ~~l~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~----~~~~~~~~~~~~~~~~d~~~ 93 (265)
-+|.+..... ..++.+|||+||++|.++..+++.. ..|.|+|+...+...... ..++....... |+.
T Consensus 68 ~KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~-----di~- 141 (300)
T 3eld_A 68 AKIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKS-----NVF- 141 (300)
T ss_dssp HHHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSC-----CTT-
T ss_pred HHHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCc-----eee-
Confidence 3666666553 2577899999999999999999863 368999997653211110 01222222111 222
Q ss_pred ccCCCCceeEEEeccccc----cCChh---HHHHHHHHHhcCCC-cEEEEEecC
Q 024647 94 NVAAQSTVDLVTIAQAMH----WFDLP---QFYNQVKWVLKKPN-GVIATWCYT 139 (265)
Q Consensus 94 ~~~~~~~~Dlv~~~~~~~----~~~~~---~~l~~~~~~Lk~pg-G~l~~~~~~ 139 (265)
.+..+++|+|+|..+-+ ..|.. .+++-+.++|+ || |.|++-.+.
T Consensus 142 -~l~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~Lk-pG~G~FV~KvF~ 193 (300)
T 3eld_A 142 -TMPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKH-VNTENFCVKVLA 193 (300)
T ss_dssp -TSCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCC-TTCCEEEEEESS
T ss_pred -ecCCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCcEEEEecc
Confidence 23567899999987766 22322 45778889999 99 999986655
No 287
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.39 E-value=1.5e-07 Score=76.70 Aligned_cols=109 Identities=9% Similarity=-0.002 Sum_probs=67.2
Q ss_pred HHHHHHHhh-CCCCCeEEEEcCCcchhHHHHHhc--CCcEEEEcCCHHHHHHHHcC----CCceEEecCCccchh-hhhh
Q 024647 22 ELFKFITSK-TTNHELAWDVGTGSGQAAASLSGI--FENVIGTETSPKQIEFATKL----PNIRYELTSPAMSIA-ELEQ 93 (265)
Q Consensus 22 ~l~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~-d~~~ 93 (265)
+|.++-... .+++++|||+||++|..++..++. ...|.|.++.... ..... .++++++. ..+ |+..
T Consensus 61 KL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~--~~~P~~~~~~Gv~~i~~----~~G~Df~~ 134 (269)
T 2px2_A 61 KLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG--HEEPMLMQSYGWNIVTM----KSGVDVFY 134 (269)
T ss_dssp HHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT--SCCCCCCCSTTGGGEEE----ECSCCGGG
T ss_pred HHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc--ccCCCcccCCCceEEEe----eccCCccC
Confidence 555554444 367899999999999999999987 3343444443321 01111 34433321 003 5554
Q ss_pred ccCCCCceeEEEecccc---ccC-Chh---HHHHHHHHHhcCCCc-EEEEEecC
Q 024647 94 NVAAQSTVDLVTIAQAM---HWF-DLP---QFYNQVKWVLKKPNG-VIATWCYT 139 (265)
Q Consensus 94 ~~~~~~~~Dlv~~~~~~---~~~-~~~---~~l~~~~~~Lk~pgG-~l~~~~~~ 139 (265)
+ +..++|+|+|..+= ++. |.. .+++-+.++|+ ||| .|++=.+.
T Consensus 135 ~--~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk-~gG~~FvvKVFq 185 (269)
T 2px2_A 135 K--PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLS-RGPKEFCIKILC 185 (269)
T ss_dssp S--CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHT-TCCSEEEEEESC
T ss_pred C--CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhh-cCCcEEEEEECC
Confidence 3 45689999997633 222 333 25777789999 999 88886555
No 288
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.36 E-value=2.4e-06 Score=71.05 Aligned_cols=91 Identities=16% Similarity=0.135 Sum_probs=67.8
Q ss_pred hCCCCcHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC--CCceEEecCCccchhhhh
Q 024647 15 TRPNYPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL--PNIRYELTSPAMSIAELE 92 (265)
Q Consensus 15 ~rp~y~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~~d~~ 92 (265)
+.|...+++++.|. ..+++.+||.+||.|..|..++++..+|+|+|.++.+++.++++ .++.++..+......-+.
T Consensus 6 H~pVLl~e~le~L~--~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~ 83 (285)
T 1wg8_A 6 HVPVLYQEALDLLA--VRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLA 83 (285)
T ss_dssp CCCTTHHHHHHHHT--CCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHH
T ss_pred chhHHHHHHHHhhC--CCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHH
Confidence 67888888888774 35678999999999999999999877899999999999988753 357777765522111122
Q ss_pred hccCCCCceeEEEeccc
Q 024647 93 QNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 93 ~~~~~~~~~Dlv~~~~~ 109 (265)
.. ..+++|.|++...
T Consensus 84 ~~--g~~~vDgIL~DLG 98 (285)
T 1wg8_A 84 AL--GVERVDGILADLG 98 (285)
T ss_dssp HT--TCSCEEEEEEECS
T ss_pred Hc--CCCCcCEEEeCCc
Confidence 22 2357999998653
No 289
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.34 E-value=1.4e-06 Score=79.67 Aligned_cols=113 Identities=19% Similarity=0.186 Sum_probs=78.5
Q ss_pred cHHHHHHHHhhCC------CCCeEEEEcCCcchhHHHHHhcC-----CcEEEEcCCHHHHHHHHc------C--CCceEE
Q 024647 20 PEELFKFITSKTT------NHELAWDVGTGSGQAAASLSGIF-----ENVIGTETSPKQIEFATK------L--PNIRYE 80 (265)
Q Consensus 20 ~~~l~~~l~~~~~------~~~~vlDvGcG~G~~~~~l~~~~-----~~v~~vD~s~~~~~~a~~------~--~~~~~~ 80 (265)
|..+.+.+..... ++.+|+|.+||+|.+...++++. .+++|+|+++.++..|+. . .+..+.
T Consensus 202 P~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~ 281 (542)
T 3lkd_A 202 PQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLH 281 (542)
T ss_dssp CHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred cHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceE
Confidence 6666666655432 45789999999999998887763 469999999999998874 1 234455
Q ss_pred ecCCccchhhhhhc--c-CCCCceeEEEecccc--ccC-C------h---------------hHHHHHHHHHhcCCCcEE
Q 024647 81 LTSPAMSIAELEQN--V-AAQSTVDLVTIAQAM--HWF-D------L---------------PQFYNQVKWVLKKPNGVI 133 (265)
Q Consensus 81 ~~~~~~~~~d~~~~--~-~~~~~~Dlv~~~~~~--~~~-~------~---------------~~~l~~~~~~Lk~pgG~l 133 (265)
. +|.-.. + .....||+|+++-.+ .|- + + -.++..+.+.|++|||++
T Consensus 282 ~-------gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~ 354 (542)
T 3lkd_A 282 N-------ADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVM 354 (542)
T ss_dssp E-------SCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEE
T ss_pred e-------cceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeE
Confidence 5 332222 2 345789999998633 231 0 0 138899999998349999
Q ss_pred EEEecC
Q 024647 134 ATWCYT 139 (265)
Q Consensus 134 ~~~~~~ 139 (265)
+++.+.
T Consensus 355 a~VlP~ 360 (542)
T 3lkd_A 355 AIVLPH 360 (542)
T ss_dssp EEEEET
T ss_pred EEEecc
Confidence 887765
No 290
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.31 E-value=9.7e-07 Score=73.19 Aligned_cols=105 Identities=16% Similarity=0.229 Sum_probs=63.9
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-------CC-------cEEEEcCCH---HHHHHH-----------HcC--------CC
Q 024647 33 NHELAWDVGTGSGQAAASLSGI-------FE-------NVIGTETSP---KQIEFA-----------TKL--------PN 76 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~-------~~-------~v~~vD~s~---~~~~~a-----------~~~--------~~ 76 (265)
++.+|||+|||+|..+..+++. .+ +++++|..| +++..+ +.+ ++
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4578999999999988886543 22 699999877 444432 210 00
Q ss_pred c---eEEe--cCCccchhhhhh-ccCCC----CceeEEEeccccccCC----hhHHHHHHHHHhcCCCcEEEEEec
Q 024647 77 I---RYEL--TSPAMSIAELEQ-NVAAQ----STVDLVTIAQAMHWFD----LPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 77 ~---~~~~--~~~~~~~~d~~~-~~~~~----~~~Dlv~~~~~~~~~~----~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+ .+.. .++++..+|+.+ ++..+ .+||+|+....-.--+ ...+++.+.++|+ |||+|+.++.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~-pGG~l~tysa 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLAR-PGGTLATFTS 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEE-EEEEEEESCC
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcC-CCcEEEEEeC
Confidence 0 0100 122334466655 33222 2799999853111001 2579999999999 9999997554
No 291
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.27 E-value=1.7e-06 Score=75.01 Aligned_cols=98 Identities=15% Similarity=0.035 Sum_probs=71.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC-cEEEEcCCHHHHHHHHcC-C-------------CceEEecCCccchhhhhhc--
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE-NVIGTETSPKQIEFATKL-P-------------NIRYELTSPAMSIAELEQN-- 94 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-~-------------~~~~~~~~~~~~~~d~~~~-- 94 (265)
.++++||-||.|.|...+.+.++.. +|+.||+++.+++.+++. + +++... +|.-.+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii-------~Da~~fl~ 276 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLI-------EDCIPVLK 276 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEE-------SCHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeeh-------HHHHHHHH
Confidence 3568999999999999999988654 699999999999999862 2 234444 443221
Q ss_pred --cCCCCceeEEEeccccccC--C---------hhHHHHHHHHHhcCCCcEEEEEe
Q 024647 95 --VAAQSTVDLVTIAQAMHWF--D---------LPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 95 --~~~~~~~Dlv~~~~~~~~~--~---------~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
....+.||+|+....-... + ...+++.+.++|+ |||+++...
T Consensus 277 ~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~-p~GVlv~Q~ 331 (381)
T 3c6k_A 277 RYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLK-QDGKYFTQG 331 (381)
T ss_dssp HHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEE-EEEEEEEEE
T ss_pred hhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcC-CCCEEEEec
Confidence 1234679999987432221 1 1367889999999 999998754
No 292
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.19 E-value=2.1e-06 Score=72.75 Aligned_cols=59 Identities=17% Similarity=0.227 Sum_probs=50.8
Q ss_pred hCCCCcHHHHHHHHhhC-CCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc
Q 024647 15 TRPNYPEELFKFITSKT-TNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK 73 (265)
Q Consensus 15 ~rp~y~~~l~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (265)
+...+|.++++.+.... .+++.|||++||+|.++..+++.+.+++|+|+++.+++.|++
T Consensus 216 h~~~~p~~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~ 275 (297)
T 2zig_A 216 HPAPFPLELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKE 275 (297)
T ss_dssp --CCSCHHHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence 33457899999887654 577899999999999999999999999999999999998875
No 293
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.17 E-value=4.1e-06 Score=69.52 Aligned_cols=109 Identities=10% Similarity=-0.010 Sum_probs=69.6
Q ss_pred HHHHHHHhhC-CCCCeEEEEcCCcchhHHHHHhc-CC-cEEEEcCCHHHHHH---HHcC--CCceEEecCCccchhhhhh
Q 024647 22 ELFKFITSKT-TNHELAWDVGTGSGQAAASLSGI-FE-NVIGTETSPKQIEF---ATKL--PNIRYELTSPAMSIAELEQ 93 (265)
Q Consensus 22 ~l~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~-~~-~v~~vD~s~~~~~~---a~~~--~~~~~~~~~~~~~~~d~~~ 93 (265)
+|.++..... .+.++|||+||++|.++..++.. ++ +|+|+|+...-.+. .+++ ..+.+... -|+..
T Consensus 82 KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~------~Dv~~ 155 (321)
T 3lkz_A 82 KLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSG------VDVFY 155 (321)
T ss_dssp HHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECS------CCTTS
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEec------cCHhh
Confidence 5665555543 56779999999999999976654 44 69999998762210 0011 22555552 14444
Q ss_pred ccCCCCceeEEEeccccc----cCChh---HHHHHHHHHhcCCC-cEEEEEecC
Q 024647 94 NVAAQSTVDLVTIAQAMH----WFDLP---QFYNQVKWVLKKPN-GVIATWCYT 139 (265)
Q Consensus 94 ~~~~~~~~Dlv~~~~~~~----~~~~~---~~l~~~~~~Lk~pg-G~l~~~~~~ 139 (265)
++ ..++|+|+|.-+-- +.|.. .+|+-+.+.|+ +| |.|+|-.+.
T Consensus 156 l~--~~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~-~~~~~f~~KVl~ 206 (321)
T 3lkz_A 156 RP--SECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLH-RGPREFCVKVLC 206 (321)
T ss_dssp SC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHT-TCCCEEEEEESC
T ss_pred CC--CCCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhc-cCCCcEEEEEcC
Confidence 53 36799999977511 11222 36777788999 88 888875544
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.02 E-value=1.2e-05 Score=64.65 Aligned_cols=108 Identities=13% Similarity=0.057 Sum_probs=70.8
Q ss_pred HHHHHHHhhC-CCCCeEEEEcCCcchhHHHHHhc-CC-cEEEEcCCHHHHHHH---Hc--CCCceEEecCCccchhhhhh
Q 024647 22 ELFKFITSKT-TNHELAWDVGTGSGQAAASLSGI-FE-NVIGTETSPKQIEFA---TK--LPNIRYELTSPAMSIAELEQ 93 (265)
Q Consensus 22 ~l~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~-~~-~v~~vD~s~~~~~~a---~~--~~~~~~~~~~~~~~~~d~~~ 93 (265)
+|.+...... .+.++|||+||++|.++..++.. ++ +|+|+|+...-.+.= +. -..+.|.+. -|+..
T Consensus 66 KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~g------vDv~~ 139 (267)
T 3p8z_A 66 KLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSG------KDVFY 139 (267)
T ss_dssp HHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECS------CCGGG
T ss_pred HHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEec------cceee
Confidence 5555555443 57789999999999999977654 43 699999976633210 00 156777773 16555
Q ss_pred ccCCCCceeEEEeccccc----cCChh---HHHHHHHHHhcCCCcEEEEEecC
Q 024647 94 NVAAQSTVDLVTIAQAMH----WFDLP---QFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 94 ~~~~~~~~Dlv~~~~~~~----~~~~~---~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+ +..++|.|+|..+=- +.|.. ++|+-+.+.|+ + |.+++-...
T Consensus 140 ~--~~~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~-~-~~fc~KVl~ 188 (267)
T 3p8z_A 140 L--PPEKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLK-N-NQFCIKVLN 188 (267)
T ss_dssp C--CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCS-S-CEEEEEESC
T ss_pred c--CCccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhcc-c-CCEEEEEcc
Confidence 5 347899999976431 22222 36677788899 8 777764443
No 295
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.97 E-value=2.4e-05 Score=65.50 Aligned_cols=112 Identities=12% Similarity=0.056 Sum_probs=74.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-------CCcEEEEcCCHH--------------------------HHHHHHc-----
Q 024647 32 TNHELAWDVGTGSGQAAASLSGI-------FENVIGTETSPK--------------------------QIEFATK----- 73 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~-------~~~v~~vD~s~~--------------------------~~~~a~~----- 73 (265)
..++.|||+|+..|..+..+++. ..+|+++|..+. .++.+++
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 44678999999999999988653 357999996432 2333332
Q ss_pred -C--CCceEEecCCccchhhhhh-cc-CCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecCCCCCChHHH
Q 024647 74 -L--PNIRYELTSPAMSIAELEQ-NV-AAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVD 148 (265)
Q Consensus 74 -~--~~~~~~~~~~~~~~~d~~~-~~-~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~ 148 (265)
. .++.++.+++ .+ ++ .+.++||+|+..... +-.....++.+...|+ |||++++-++. ..+...
T Consensus 185 gl~~~~I~li~Gda-------~etL~~~~~~~~d~vfIDaD~-y~~~~~~Le~~~p~L~-pGGiIv~DD~~---~~~G~~ 252 (282)
T 2wk1_A 185 DLLDEQVRFLPGWF-------KDTLPTAPIDTLAVLRMDGDL-YESTWDTLTNLYPKVS-VGGYVIVDDYM---MCPPCK 252 (282)
T ss_dssp TCCSTTEEEEESCH-------HHHSTTCCCCCEEEEEECCCS-HHHHHHHHHHHGGGEE-EEEEEEESSCT---TCHHHH
T ss_pred CCCcCceEEEEeCH-------HHHHhhCCCCCEEEEEEcCCc-cccHHHHHHHHHhhcC-CCEEEEEcCCC---CCHHHH
Confidence 1 5688888543 33 22 235689999987542 1133468999999999 99999986652 124445
Q ss_pred Hhhcccc
Q 024647 149 AVFQPFY 155 (265)
Q Consensus 149 ~~~~~~~ 155 (265)
+++.+|.
T Consensus 253 ~Av~Ef~ 259 (282)
T 2wk1_A 253 DAVDEYR 259 (282)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555544
No 296
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.71 E-value=0.00025 Score=58.91 Aligned_cols=118 Identities=11% Similarity=0.053 Sum_probs=73.0
Q ss_pred HHHHHHHhh---CCCCCeEEEEcC------CcchhHHH-HHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhh
Q 024647 22 ELFKFITSK---TTNHELAWDVGT------GSGQAAAS-LSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAEL 91 (265)
Q Consensus 22 ~l~~~l~~~---~~~~~~vlDvGc------G~G~~~~~-l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~ 91 (265)
++.++|... .+.+++|||+|+ -+|..... +.+.++.|+++|+.+-.. ..+ .+++ +|.
T Consensus 95 qlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s-----da~-~~Iq-------GD~ 161 (344)
T 3r24_A 95 QLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS-----DAD-STLI-------GDC 161 (344)
T ss_dssp HHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC-----SSS-EEEE-------SCG
T ss_pred HHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc-----CCC-eEEE-------ccc
Confidence 455666331 267899999996 57763222 222234699999987631 123 3355 554
Q ss_pred hhccCCCCceeEEEecccccc---CC---------hhHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhhcccc
Q 024647 92 EQNVAAQSTVDLVTIAQAMHW---FD---------LPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVFQPFY 155 (265)
Q Consensus 92 ~~~~~~~~~~Dlv~~~~~~~~---~~---------~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~~~~~ 155 (265)
.... ..++||+|++..+=.- .| .+.++.-+.++|+ |||.|++=.+.... .+.+.++.+.|.
T Consensus 162 ~~~~-~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~Lk-pGGsFvVKVFQGsg-~~~L~~lrk~F~ 234 (344)
T 3r24_A 162 ATVH-TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLA-LGGSIAVKITEHSW-NADLYKLMGHFS 234 (344)
T ss_dssp GGEE-ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEE-EEEEEEEEECSSSC-CHHHHHHHTTEE
T ss_pred cccc-cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCc-CCCEEEEEEecCCC-HHHHHHHHhhCC
Confidence 4443 3478999999763221 21 2356777899999 99999986665444 466666655443
No 297
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.71 E-value=0.0002 Score=61.95 Aligned_cols=100 Identities=17% Similarity=0.123 Sum_probs=71.0
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcC------------CCceEEecCCccchhhhhhcc-C
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKL------------PNIRYELTSPAMSIAELEQNV-A 96 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~------------~~~~~~~~~~~~~~~d~~~~~-~ 96 (265)
.++.+|||+.||+|.=|.++++... .|+++|+++.-++..++. .++.... .|...++ .
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~-------~D~~~~~~~ 219 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTS-------WDGRKWGEL 219 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEEC-------CCGGGHHHH
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEe-------Cchhhcchh
Confidence 5678999999999999999998765 599999999988766531 2444444 3443332 2
Q ss_pred CCCceeEEEecccc----c----------cC-C----------hhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 97 AQSTVDLVTIAQAM----H----------WF-D----------LPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 97 ~~~~~Dlv~~~~~~----~----------~~-~----------~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
..+.||.|++.-.. + |- . ....+..+.+.|| |||+|+..+..
T Consensus 220 ~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk-pGG~LVYsTCS 286 (359)
T 4fzv_A 220 EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATK-PGGHVVYSTCS 286 (359)
T ss_dssp STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEE-EEEEEEEEESC
T ss_pred ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCC-CCcEEEEEeCC
Confidence 45689999974311 1 11 1 1247788899999 99999987775
No 298
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.70 E-value=0.00024 Score=60.50 Aligned_cols=94 Identities=10% Similarity=0.101 Sum_probs=66.0
Q ss_pred hhCCCCcHHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcC---CcEEEEcCCHHHHHHHHcC--CCceEEecCCccch
Q 024647 14 ETRPNYPEELFKFITSKTTNHELAWDVGTGSGQAAASLSGIF---ENVIGTETSPKQIEFATKL--PNIRYELTSPAMSI 88 (265)
Q Consensus 14 ~~rp~y~~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~ 88 (265)
.+.|..-.++++.|. ..+++.+||..||.|..|..++++. .+|+|+|.++.+++.++++ .++.++..+..-..
T Consensus 40 ~H~pVLl~Evl~~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~ 117 (347)
T 3tka_A 40 KHTTVLLDEAVNGLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALG 117 (347)
T ss_dssp --CCTTTHHHHHHTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHH
T ss_pred CcccccHHHHHHhhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHH
Confidence 377888888887774 3567899999999999999999874 3699999999999998653 45677776552211
Q ss_pred hhhhhccCCCCceeEEEecccc
Q 024647 89 AELEQNVAAQSTVDLVTIAQAM 110 (265)
Q Consensus 89 ~d~~~~~~~~~~~Dlv~~~~~~ 110 (265)
.-+..... .+++|.|+....+
T Consensus 118 ~~L~~~g~-~~~vDgILfDLGV 138 (347)
T 3tka_A 118 EYVAERDL-IGKIDGILLDLGV 138 (347)
T ss_dssp HHHHHTTC-TTCEEEEEEECSC
T ss_pred HHHHhcCC-CCcccEEEECCcc
Confidence 11222211 1369999987743
No 299
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.62 E-value=8.7e-05 Score=61.46 Aligned_cols=56 Identities=23% Similarity=0.305 Sum_probs=49.7
Q ss_pred CCcHHHHHHHHhh-CCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc
Q 024647 18 NYPEELFKFITSK-TTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK 73 (265)
Q Consensus 18 ~y~~~l~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (265)
..|.++++.+... ..+++.|||..||+|+++....+.+.+++|+|+++..++.+++
T Consensus 196 ~~p~~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~ 252 (260)
T 1g60_A 196 PKPRDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANF 252 (260)
T ss_dssp CCCHHHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence 5688999887765 4678899999999999999999999999999999999998874
No 300
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.42 E-value=0.00054 Score=56.94 Aligned_cols=113 Identities=15% Similarity=0.128 Sum_probs=78.3
Q ss_pred HHHHHHHHhhCCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcC----CCceEEecCCccchhhhhhccC
Q 024647 21 EELFKFITSKTTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKL----PNIRYELTSPAMSIAELEQNVA 96 (265)
Q Consensus 21 ~~l~~~l~~~~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~d~~~~~~ 96 (265)
...++.+... + +..+||+=+|||.+++.+.+.+.+++.+|.++..++..++. .++.....++. .-+..+..
T Consensus 81 ~~yf~~l~~~-n-~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~---~~L~~l~~ 155 (283)
T 2oo3_A 81 LEYISVIKQI-N-LNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGV---SKLNALLP 155 (283)
T ss_dssp HHHHHHHHHH-S-SSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHH---HHHHHHCS
T ss_pred HHHHHHHHHh-c-CCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHH---HHHHHhcC
Confidence 3456666653 2 35589999999999999998778899999999999988863 23455543320 11222223
Q ss_pred CCCceeEEEeccccccC-ChhHHHHHHHH--HhcCCCcEEEEEecC
Q 024647 97 AQSTVDLVTIAQAMHWF-DLPQFYNQVKW--VLKKPNGVIATWCYT 139 (265)
Q Consensus 97 ~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~--~Lk~pgG~l~~~~~~ 139 (265)
+...||+|++.-....- +..++++.+.+ .+. |+|++++|.+-
T Consensus 156 ~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~-~~Gi~v~WYPi 200 (283)
T 2oo3_A 156 PPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKF-STGLYCVWYPV 200 (283)
T ss_dssp CTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHC-TTSEEEEEEEE
T ss_pred CCCCccEEEECCCCCCCcHHHHHHHHHHHhCccC-CCeEEEEEEec
Confidence 44579999998766643 45556655544 456 89999999885
No 301
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.30 E-value=0.0014 Score=59.77 Aligned_cols=117 Identities=15% Similarity=0.140 Sum_probs=74.8
Q ss_pred cHHHHHHHHhhC--CCCCeEEEEcCCcchhHHHHHhc---------------CCcEEEEcCCHHHHHHHHc------CCC
Q 024647 20 PEELFKFITSKT--TNHELAWDVGTGSGQAAASLSGI---------------FENVIGTETSPKQIEFATK------LPN 76 (265)
Q Consensus 20 ~~~l~~~l~~~~--~~~~~vlDvGcG~G~~~~~l~~~---------------~~~v~~vD~s~~~~~~a~~------~~~ 76 (265)
|..+++.+.... .++.+|+|-.||+|.+.....++ -..+.|+|+++.+...|+- ...
T Consensus 202 P~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~ 281 (530)
T 3ufb_A 202 PRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEY 281 (530)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSC
T ss_pred cHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcc
Confidence 677787777664 34568999999999998776542 1359999999999888763 222
Q ss_pred ceEEecCCccchhhhhhccCCCCceeEEEeccccc--cC-C--------------hhHHHHHHHHHhcC------CCcEE
Q 024647 77 IRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMH--WF-D--------------LPQFYNQVKWVLKK------PNGVI 133 (265)
Q Consensus 77 ~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~--~~-~--------------~~~~l~~~~~~Lk~------pgG~l 133 (265)
.++..++.- . ...... .+...||+|+++-.+- |- + ...+++.+.+.|++ |||++
T Consensus 282 ~~I~~~dtL-~-~~~~~~-~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~ 358 (530)
T 3ufb_A 282 PRIDPENSL-R-FPLREM-GDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRA 358 (530)
T ss_dssp CEEECSCTT-C-SCGGGC-CGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEE
T ss_pred ccccccccc-c-Cchhhh-cccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceE
Confidence 334442210 0 000111 1235799999987552 11 0 01477888888861 59999
Q ss_pred EEEecC
Q 024647 134 ATWCYT 139 (265)
Q Consensus 134 ~~~~~~ 139 (265)
+++.+.
T Consensus 359 avVlP~ 364 (530)
T 3ufb_A 359 AVVVPN 364 (530)
T ss_dssp EEEEEH
T ss_pred EEEecc
Confidence 987764
No 302
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.29 E-value=0.00053 Score=59.17 Aligned_cols=65 Identities=14% Similarity=0.079 Sum_probs=50.2
Q ss_pred cHHHHHHHHhhCC--------CCCeEEEEcCCcchhHHHHHhc--CCcEEEEcCCHHHHHHHHc---CCCceEEecCC
Q 024647 20 PEELFKFITSKTT--------NHELAWDVGTGSGQAAASLSGI--FENVIGTETSPKQIEFATK---LPNIRYELTSP 84 (265)
Q Consensus 20 ~~~l~~~l~~~~~--------~~~~vlDvGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~---~~~~~~~~~~~ 84 (265)
.+.+++.|..... ++..|||||+|.|.+|..|+++ ..+|+++|+++.++...+. .+++..+.+++
T Consensus 37 d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~ 114 (353)
T 1i4w_A 37 NPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDP 114 (353)
T ss_dssp CHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCT
T ss_pred CHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCc
Confidence 4566666665432 3478999999999999999986 4589999999999988765 35677777554
No 303
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=97.20 E-value=0.0023 Score=56.11 Aligned_cols=105 Identities=15% Similarity=0.114 Sum_probs=71.1
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHhc-CC-cEEEEcCCHHHHHHHHcCCCceEEecCCccc-hhhhhhccCCCCceeEEEe
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSGI-FE-NVIGTETSPKQIEFATKLPNIRYELTSPAMS-IAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~Dlv~~ 106 (265)
..++++||.+|||. |.++..+++. ++ +|+++|.++..++.++++. ...+....... ...+..+. ....+|+|+-
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG-a~~i~~~~~~~~~~~~~~~~-~g~g~Dvvid 260 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAG-FETIDLRNSAPLRDQIDQIL-GKPEVDCGVD 260 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTT-CEEEETTSSSCHHHHHHHHH-SSSCEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC-CcEEcCCCcchHHHHHHHHh-CCCCCCEEEE
Confidence 35778999999987 8888888874 66 8999999999999998753 34333221100 12222221 2336999997
Q ss_pred cccccc---------CChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 107 AQAMHW---------FDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 107 ~~~~~~---------~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
...-.. .++...++++.++|+ ++|++++...
T Consensus 261 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~-~gG~iv~~G~ 300 (398)
T 2dph_A 261 AVGFEAHGLGDEANTETPNGALNSLFDVVR-AGGAIGIPGI 300 (398)
T ss_dssp CSCTTCBCSGGGTTSBCTTHHHHHHHHHEE-EEEEEECCSC
T ss_pred CCCCccccccccccccccHHHHHHHHHHHh-cCCEEEEecc
Confidence 654322 234468999999999 9999987543
No 304
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.11 E-value=0.00012 Score=77.88 Aligned_cols=109 Identities=14% Similarity=0.122 Sum_probs=53.5
Q ss_pred HHHHHHhhC-CCCCeEEEEcCCcchhHHHHHhc-------CCcEEEEcCCHHHHHHHHcC-CCceEEecCCccchhhhhh
Q 024647 23 LFKFITSKT-TNHELAWDVGTGSGQAAASLSGI-------FENVIGTETSPKQIEFATKL-PNIRYELTSPAMSIAELEQ 93 (265)
Q Consensus 23 l~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~-------~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~ 93 (265)
.++.+.... .+..+|||||.|+|..+..+.+. +.+++.+|+|+...+.+++. ......... -|.++
T Consensus 1229 ~~~~~~~~~~~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~-----~d~~~ 1303 (2512)
T 2vz8_A 1229 CVDTALENMASPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQ-----WDPAN 1303 (2512)
T ss_dssp HHHHHHTTSSSSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEEC-----CCSSC
T ss_pred HHHHHHhcCCCCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhccccccc-----ccccc
Confidence 334443332 34578999999999888776543 23689999999888777642 111111100 01111
Q ss_pred c-cCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 94 N-VAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 94 ~-~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
. ++...+||+|++...+|-. +....+.++.++|| |||.+++..
T Consensus 1304 ~~~~~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~-p~G~l~~~e 1348 (2512)
T 2vz8_A 1304 PAPGSLGKADLLVCNCALATLGDPAVAVGNMAATLK-EGGFLLLHT 1348 (2512)
T ss_dssp CCC-----CCEEEEECC---------------------CCEEEEEE
T ss_pred cccCCCCceeEEEEcccccccccHHHHHHHHHHhcC-CCcEEEEEe
Confidence 1 1234579999999999977 78889999999999 999988754
No 305
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.11 E-value=0.0024 Score=55.43 Aligned_cols=99 Identities=17% Similarity=0.134 Sum_probs=67.7
Q ss_pred CCCCeEEEEcCCc-chhHHHHHhc-CC-cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 32 TNHELAWDVGTGS-GQAAASLSGI-FE-NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 32 ~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
.++++||-+|||. |.++..+++. ++ +|+++|.++..++.++++................+.+. ..+.+|+|+...
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~--~~gg~D~vid~~ 266 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEI--TDGGVNFALEST 266 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHH--TTSCEEEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHh--cCCCCcEEEECC
Confidence 5678999999987 8888888874 56 59999999999998886432223332111111122222 223799998653
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.....++.+.+.|+ ++|++++...
T Consensus 267 -----g~~~~~~~~~~~l~-~~G~iv~~G~ 290 (371)
T 1f8f_A 267 -----GSPEILKQGVDALG-ILGKIAVVGA 290 (371)
T ss_dssp -----CCHHHHHHHHHTEE-EEEEEEECCC
T ss_pred -----CCHHHHHHHHHHHh-cCCEEEEeCC
Confidence 23467899999999 9999987654
No 306
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.10 E-value=0.004 Score=53.70 Aligned_cols=100 Identities=12% Similarity=0.079 Sum_probs=67.7
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHhc-CC-cEEEEcCCHHHHHHHHcCCCceEEecC---CccchhhhhhccCCCCceeEE
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSGI-FE-NVIGTETSPKQIEFATKLPNIRYELTS---PAMSIAELEQNVAAQSTVDLV 104 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~Dlv 104 (265)
..++++||-+|+|. |.++..+++. ++ +|+++|.++..++.++++..-...... .......+.... . +.+|+|
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~-~-~g~D~v 246 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQL-G-CKPEVT 246 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHH-T-SCCSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHh-C-CCCCEE
Confidence 45778999999986 8888888874 56 799999999999988875322333221 000001122221 2 569999
Q ss_pred EeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 105 TIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+-.. .....+..+.++|+ ++|+++....
T Consensus 247 id~~-----g~~~~~~~~~~~l~-~~G~iv~~G~ 274 (356)
T 1pl8_A 247 IECT-----GAEASIQAGIYATR-SGGTLVLVGL 274 (356)
T ss_dssp EECS-----CCHHHHHHHHHHSC-TTCEEEECSC
T ss_pred EECC-----CChHHHHHHHHHhc-CCCEEEEEec
Confidence 8653 23457889999999 9999987654
No 307
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=97.06 E-value=0.0027 Score=54.69 Aligned_cols=101 Identities=14% Similarity=0.111 Sum_probs=68.7
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHhc-CC-cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEec
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSGI-FE-NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~ 107 (265)
..++++||-+|+|. |.++..+++. ++ +|+++|.++..++.++++................+.+. .....+|+|+-.
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~-t~g~g~D~v~d~ 242 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKA-TDGKGVDKVVIA 242 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHH-TTTCCEEEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHH-cCCCCCCEEEEC
Confidence 35678899999987 8888888875 55 79999999999998887532223321111111122222 234479999964
Q ss_pred cccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 108 QAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 108 ~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
. .....++.+.+.|+ |+|+++....
T Consensus 243 ~-----g~~~~~~~~~~~l~-~~G~~v~~G~ 267 (352)
T 3fpc_A 243 G-----GDVHTFAQAVKMIK-PGSDIGNVNY 267 (352)
T ss_dssp S-----SCTTHHHHHHHHEE-EEEEEEECCC
T ss_pred C-----CChHHHHHHHHHHh-cCCEEEEecc
Confidence 2 23468899999999 9999987654
No 308
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=97.02 E-value=0.0033 Score=55.05 Aligned_cols=105 Identities=17% Similarity=0.096 Sum_probs=71.9
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHhc-CC-cEEEEcCCHHHHHHHHcCCCceEEecCCcc-chhhhhhccCCCCceeEEEe
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSGI-FE-NVIGTETSPKQIEFATKLPNIRYELTSPAM-SIAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~Dlv~~ 106 (265)
..++++||-+|||. |.++..+++. ++ +|+++|.++..++.++++. ...+...-.. ....+..+ .....+|+|+-
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lG-a~~i~~~~~~~~~~~v~~~-t~g~g~Dvvid 260 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG-FEIADLSLDTPLHEQIAAL-LGEPEVDCAVD 260 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTT-CEEEETTSSSCHHHHHHHH-HSSSCEEEEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcC-CcEEccCCcchHHHHHHHH-hCCCCCCEEEE
Confidence 35678999999987 8888888875 55 6999999999999998753 3333321100 01122222 12346999996
Q ss_pred ccc----------cccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 107 AQA----------MHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 107 ~~~----------~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.-. .|+.++...++.+.++|+ ++|++++...
T Consensus 261 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~iv~~G~ 301 (398)
T 1kol_A 261 AVGFEARGHGHEGAKHEAPATVLNSLMQVTR-VAGKIGIPGL 301 (398)
T ss_dssp CCCTTCBCSSTTGGGSBCTTHHHHHHHHHEE-EEEEEEECSC
T ss_pred CCCCcccccccccccccchHHHHHHHHHHHh-cCCEEEEecc
Confidence 543 244456678999999999 9999987553
No 309
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.92 E-value=0.0045 Score=52.93 Aligned_cols=98 Identities=15% Similarity=0.110 Sum_probs=67.9
Q ss_pred CCCCeEEEEcCCc-chhHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 32 TNHELAWDVGTGS-GQAAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 32 ~~~~~vlDvGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
.++++||-.|+|. |.++..+++. +++|+++|.+++.++.++++.........-......+... .+.+|+|+...
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~---~g~~d~vid~~- 240 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKE---IGGAHGVLVTA- 240 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHH---HSSEEEEEESS-
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHh---CCCCCEEEEeC-
Confidence 5678899999986 8888888874 6799999999999999987643333332211111112221 23689988642
Q ss_pred cccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 110 MHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 110 ~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.....++.+.+.|+ ++|+++....
T Consensus 241 ----g~~~~~~~~~~~l~-~~G~iv~~G~ 264 (340)
T 3s2e_A 241 ----VSPKAFSQAIGMVR-RGGTIALNGL 264 (340)
T ss_dssp ----CCHHHHHHHHHHEE-EEEEEEECSC
T ss_pred ----CCHHHHHHHHHHhc-cCCEEEEeCC
Confidence 23568899999999 9999987544
No 310
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.83 E-value=0.00087 Score=57.22 Aligned_cols=56 Identities=20% Similarity=0.239 Sum_probs=49.7
Q ss_pred CCcHHHHHHHHhh-CCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHc
Q 024647 18 NYPEELFKFITSK-TTNHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATK 73 (265)
Q Consensus 18 ~y~~~l~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (265)
..|.++++.+... .++++.|||--||+|+.+.+..+.+.+.+|+|+++..++.+++
T Consensus 236 ~kp~~l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~ 292 (323)
T 1boo_A 236 RFPAKLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAF 292 (323)
T ss_dssp CCCTHHHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHG
T ss_pred cCCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHH
Confidence 4678898888765 4678999999999999999999999999999999999998885
No 311
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.82 E-value=0.013 Score=50.33 Aligned_cols=101 Identities=11% Similarity=0.056 Sum_probs=66.9
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCC-ccchhhhhhccCC---CCceeEE
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSP-AMSIAELEQNVAA---QSTVDLV 104 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~-~~~~~d~~~~~~~---~~~~Dlv 104 (265)
..++++||-+|+|. |.++..+++. +++|+++|.++..++.++++..-......- ......+... .. ...+|+|
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~-~~~~~g~g~D~v 244 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIER-IRSAIGDLPNVT 244 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHH-HHHHSSSCCSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHH-hccccCCCCCEE
Confidence 45778999999986 7778787764 568999999999999888753222222110 0001112221 11 2469999
Q ss_pred EeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 105 TIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+... .....++.+.++|+ ++|+++....
T Consensus 245 id~~-----g~~~~~~~~~~~l~-~~G~iv~~G~ 272 (352)
T 1e3j_A 245 IDCS-----GNEKCITIGINITR-TGGTLMLVGM 272 (352)
T ss_dssp EECS-----CCHHHHHHHHHHSC-TTCEEEECSC
T ss_pred EECC-----CCHHHHHHHHHHHh-cCCEEEEEec
Confidence 8653 23457889999999 9999987654
No 312
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.80 E-value=0.0087 Score=51.96 Aligned_cols=99 Identities=14% Similarity=0.021 Sum_probs=67.9
Q ss_pred CCCCeEEEEcCCc-chhHHHHHhc-CC-cEEEEcCCHHHHHHHHcCCCceEEecC--CccchhhhhhccCCCCceeEEEe
Q 024647 32 TNHELAWDVGTGS-GQAAASLSGI-FE-NVIGTETSPKQIEFATKLPNIRYELTS--PAMSIAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 32 ~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~Dlv~~ 106 (265)
.++++||-+|+|. |.++..+++. ++ +|+++|.++..++.++++.....+... .......+..+ .++.+|+|+-
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~--~~gg~D~vid 269 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDL--TDGGVDYSFE 269 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHH--TTSCBSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHh--cCCCCCEEEE
Confidence 5678899999986 8888888764 56 799999999999999875332332211 00011122222 2237999996
Q ss_pred ccccccCChhHHHHHHHHHhcCCC-cEEEEEec
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPN-GVIATWCY 138 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pg-G~l~~~~~ 138 (265)
. ......++.+.+.|+ +| |++++...
T Consensus 270 ~-----~g~~~~~~~~~~~l~-~g~G~iv~~G~ 296 (378)
T 3uko_A 270 C-----IGNVSVMRAALECCH-KGWGTSVIVGV 296 (378)
T ss_dssp C-----SCCHHHHHHHHHTBC-TTTCEEEECSC
T ss_pred C-----CCCHHHHHHHHHHhh-ccCCEEEEEcc
Confidence 5 233568899999999 97 99987654
No 313
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.79 E-value=0.0076 Score=47.13 Aligned_cols=99 Identities=19% Similarity=0.094 Sum_probs=62.7
Q ss_pred CCCCeEEEEcC--CcchhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 32 TNHELAWDVGT--GSGQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 32 ~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
.++++||..|+ |.|.....++. .+.+|+++|.+++.++.+++..........-......+.+. .....+|+++.+.
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~-~~~~~~D~vi~~~ 115 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILEL-TDGYGVDVVLNSL 115 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHH-TTTCCEEEEEECC
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHH-hCCCCCeEEEECC
Confidence 56789999995 34666555554 57899999999998888776422122221110001112222 1234699999653
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
. ...++.+.+.|+ ++|+++....
T Consensus 116 g------~~~~~~~~~~l~-~~G~~v~~g~ 138 (198)
T 1pqw_A 116 A------GEAIQRGVQILA-PGGRFIELGK 138 (198)
T ss_dssp C------THHHHHHHHTEE-EEEEEEECSC
T ss_pred c------hHHHHHHHHHhc-cCCEEEEEcC
Confidence 3 357889999999 9999987543
No 314
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.77 E-value=0.01 Score=51.30 Aligned_cols=95 Identities=18% Similarity=0.148 Sum_probs=67.0
Q ss_pred CCCeEEEEc-CCc-chhHHHHHhc--CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 33 NHELAWDVG-TGS-GQAAASLSGI--FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 33 ~~~~vlDvG-cG~-G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
++++||-.| +|. |.++..+++. +.+|+++|.+++.++.++++......... ......+.++ ..+.+|+|+-.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~-~~~~~~v~~~--~~~g~Dvvid~- 246 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHS-KPLAAEVAAL--GLGAPAFVFST- 246 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTT-SCHHHHHHTT--CSCCEEEEEEC-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCC-CCHHHHHHHh--cCCCceEEEEC-
Confidence 567899998 665 8999999985 56899999999999988875432233221 1111223333 34579999864
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEE
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATW 136 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~ 136 (265)
......++.+.++|+ ++|++++.
T Consensus 247 ----~g~~~~~~~~~~~l~-~~G~iv~~ 269 (363)
T 4dvj_A 247 ----THTDKHAAEIADLIA-PQGRFCLI 269 (363)
T ss_dssp ----SCHHHHHHHHHHHSC-TTCEEEEC
T ss_pred ----CCchhhHHHHHHHhc-CCCEEEEE
Confidence 233468899999999 99999875
No 315
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.76 E-value=0.0085 Score=51.93 Aligned_cols=102 Identities=14% Similarity=0.088 Sum_probs=68.5
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHhc-CC-cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhh-ccCCCCceeEEEe
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSGI-FE-NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQ-NVAAQSTVDLVTI 106 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~Dlv~~ 106 (265)
..++++||-+|+|. |.++..+++. ++ +|+++|.++..++.++++.....+..........+.. .....+.+|+|+-
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid 259 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIE 259 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEE
Confidence 46778999999986 8888888875 55 7999999999999888743222332211111111222 0022347999996
Q ss_pred ccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
. ......++.+.++|+ +||++++...
T Consensus 260 ~-----~G~~~~~~~~~~~l~-~~G~vv~~G~ 285 (370)
T 4ej6_A 260 C-----AGVAETVKQSTRLAK-AGGTVVILGV 285 (370)
T ss_dssp C-----SCCHHHHHHHHHHEE-EEEEEEECSC
T ss_pred C-----CCCHHHHHHHHHHhc-cCCEEEEEec
Confidence 5 233568899999999 9999988654
No 316
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.72 E-value=0.0065 Score=52.87 Aligned_cols=101 Identities=14% Similarity=0.048 Sum_probs=67.4
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHhc-C-CcEEEEcCCHHHHHHHHcCCCceEEecC---CccchhhhhhccCCCCceeEE
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSGI-F-ENVIGTETSPKQIEFATKLPNIRYELTS---PAMSIAELEQNVAAQSTVDLV 104 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~Dlv 104 (265)
..++++||-+|+|. |.++..+++. + .+|+++|.+++.++.++++......... .......+.+. .....+|+|
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~-~~g~g~Dvv 271 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDI-THGRGADFI 271 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHH-TTTSCEEEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHH-hCCCCCcEE
Confidence 35678999999885 8888888875 5 4899999999999988875332333321 10000112222 123369999
Q ss_pred EeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 105 TIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+-... ....+..+.+.|+ ++|+++....
T Consensus 272 id~~g-----~~~~~~~~~~~l~-~~G~iv~~G~ 299 (380)
T 1vj0_A 272 LEATG-----DSRALLEGSELLR-RGGFYSVAGV 299 (380)
T ss_dssp EECSS-----CTTHHHHHHHHEE-EEEEEEECCC
T ss_pred EECCC-----CHHHHHHHHHHHh-cCCEEEEEec
Confidence 96532 2457889999999 9999987654
No 317
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.71 E-value=0.011 Score=50.69 Aligned_cols=99 Identities=17% Similarity=0.097 Sum_probs=65.7
Q ss_pred CCCeEEEEcCCc-chhHHHHHh-cCC-cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 33 NHELAWDVGTGS-GQAAASLSG-IFE-NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
++++||-+|+|. |..+..+++ .++ +|+++|.++..++.++++................+.+. .....+|+|+....
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~-~~g~g~D~vid~~g 245 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDI-TDGNGVDVFLEFSG 245 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHH-TTTSCEEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHH-cCCCCCCEEEECCC
Confidence 678899999975 777777776 466 89999999998888876432222221111011122222 12346999997532
Q ss_pred cccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 110 MHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 110 ~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
....++.+.+.|+ ++|+++....
T Consensus 246 -----~~~~~~~~~~~l~-~~G~iv~~g~ 268 (348)
T 2d8a_A 246 -----APKALEQGLQAVT-PAGRVSLLGL 268 (348)
T ss_dssp -----CHHHHHHHHHHEE-EEEEEEECCC
T ss_pred -----CHHHHHHHHHHHh-cCCEEEEEcc
Confidence 3467899999999 9999987554
No 318
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.70 E-value=0.0087 Score=51.23 Aligned_cols=100 Identities=11% Similarity=0.086 Sum_probs=70.0
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHhc--CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEec
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSGI--FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~ 107 (265)
..++++||-+|+|. |.++..+++. +.+|+++|.+++-++.++++........... ....+.++. ....+|+|+-.
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~-~~~~v~~~t-~g~g~d~v~d~ 246 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAG-AADAIRELT-GGQGATAVFDF 246 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTT-HHHHHHHHH-GGGCEEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCc-HHHHHHHHh-CCCCCeEEEEC
Confidence 46778999999986 8888888875 4689999999999999987643333332211 111222221 23479999975
Q ss_pred cccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 108 QAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 108 ~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
......++.+.+.|+ ++|++++...
T Consensus 247 -----~G~~~~~~~~~~~l~-~~G~iv~~G~ 271 (345)
T 3jv7_A 247 -----VGAQSTIDTAQQVVA-VDGHISVVGI 271 (345)
T ss_dssp -----SCCHHHHHHHHHHEE-EEEEEEECSC
T ss_pred -----CCCHHHHHHHHHHHh-cCCEEEEECC
Confidence 233568999999999 9999987654
No 319
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.68 E-value=0.016 Score=50.82 Aligned_cols=103 Identities=17% Similarity=0.062 Sum_probs=67.1
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHhc-CC-cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEec
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSGI-FE-NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~ 107 (265)
..++++||-+|+|. |.++..+++. ++ +|+++|.++.-++.++++.....+..........+.++ .....+|+|+-.
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~-t~g~g~D~vid~ 289 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDY-TNGLGAKLFLEA 289 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHH-TTTCCCSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHH-hCCCCCCEEEEC
Confidence 35678899999986 7888888765 56 79999999999999887533233322111111222223 234479999965
Q ss_pred cccccCChhHHHHHHHHHh----cCCCcEEEEEecC
Q 024647 108 QAMHWFDLPQFYNQVKWVL----KKPNGVIATWCYT 139 (265)
Q Consensus 108 ~~~~~~~~~~~l~~~~~~L----k~pgG~l~~~~~~ 139 (265)
-. .....+..+.++| + ++|++++....
T Consensus 290 ~g----~~~~~~~~~~~~l~~~~~-~~G~iv~~G~~ 320 (404)
T 3ip1_A 290 TG----VPQLVWPQIEEVIWRARG-INATVAIVARA 320 (404)
T ss_dssp SS----CHHHHHHHHHHHHHHCSC-CCCEEEECSCC
T ss_pred CC----CcHHHHHHHHHHHHhccC-CCcEEEEeCCC
Confidence 22 2234666777777 9 99999986543
No 320
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.65 E-value=0.0069 Score=52.34 Aligned_cols=99 Identities=14% Similarity=0.014 Sum_probs=67.9
Q ss_pred CCCCeEEEEcCCc-chhHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 32 TNHELAWDVGTGS-GQAAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 32 ~~~~~vlDvGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
.++++||-+|+|. |.++..+++. +++|+++|.++..++.++++................+... .....+|+|+....
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~-~~g~g~D~vid~~g 266 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYAL-TGDRGADHILEIAG 266 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHH-HTTCCEEEEEEETT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHH-hCCCCceEEEECCC
Confidence 5678999999886 8888887764 6799999999999998887533223332211111222223 23447999996543
Q ss_pred cccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 110 MHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 110 ~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
...+..+.+.|+ ++|++++...
T Consensus 267 ------~~~~~~~~~~l~-~~G~iv~~G~ 288 (363)
T 3uog_A 267 ------GAGLGQSLKAVA-PDGRISVIGV 288 (363)
T ss_dssp ------SSCHHHHHHHEE-EEEEEEEECC
T ss_pred ------hHHHHHHHHHhh-cCCEEEEEec
Confidence 346788899999 9999987654
No 321
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.60 E-value=0.0078 Score=51.50 Aligned_cols=97 Identities=15% Similarity=0.104 Sum_probs=65.8
Q ss_pred CCCeEEEEcCCc-chhHHHHHhc-CC-cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 33 NHELAWDVGTGS-GQAAASLSGI-FE-NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
++++||-+|+|. |..+..+++. ++ +|+++|.++..++.++++ ...............+.++. ...+|+|+...
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~--~~g~D~vid~~- 239 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVT--GSGVEVLLEFS- 239 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHH--SSCEEEEEECS-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhc--CCCCCEEEECC-
Confidence 678899999975 7777777764 66 899999999988888765 32233221111111222222 34699998653
Q ss_pred cccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 110 MHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 110 ~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.....++.+.+.|+ ++|+++....
T Consensus 240 ----g~~~~~~~~~~~l~-~~G~iv~~g~ 263 (343)
T 2dq4_A 240 ----GNEAAIHQGLMALI-PGGEARILGI 263 (343)
T ss_dssp ----CCHHHHHHHHHHEE-EEEEEEECCC
T ss_pred ----CCHHHHHHHHHHHh-cCCEEEEEec
Confidence 23467899999999 9999987654
No 322
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.55 E-value=0.014 Score=49.82 Aligned_cols=99 Identities=13% Similarity=0.105 Sum_probs=65.6
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
..++++||-+|+|. |..+..+++ .+++|+++|.++..++.++++.........-......+.+.. +.+|+|+...
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~---~~~d~vid~~ 238 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKV---GGVHAAVVTA 238 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHH---SSEEEEEESS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHh---CCCCEEEECC
Confidence 45678999999974 777777765 467999999999999988864322222211100011122221 4699998653
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.....++.+.++|+ ++|+++....
T Consensus 239 -----g~~~~~~~~~~~l~-~~G~~v~~g~ 262 (339)
T 1rjw_A 239 -----VSKPAFQSAYNSIR-RGGACVLVGL 262 (339)
T ss_dssp -----CCHHHHHHHHHHEE-EEEEEEECCC
T ss_pred -----CCHHHHHHHHHHhh-cCCEEEEecc
Confidence 23467889999999 9999987554
No 323
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.53 E-value=0.016 Score=50.12 Aligned_cols=99 Identities=14% Similarity=0.008 Sum_probs=66.9
Q ss_pred CCCCeEEEEcCCc-chhHHHHHhc-CC-cEEEEcCCHHHHHHHHcCCCceEEecCC--ccchhhhhhccCCCCceeEEEe
Q 024647 32 TNHELAWDVGTGS-GQAAASLSGI-FE-NVIGTETSPKQIEFATKLPNIRYELTSP--AMSIAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 32 ~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~Dlv~~ 106 (265)
.++++||-+|+|. |.++..+++. ++ +|+++|.++..++.++++.........- +.....+.+. ..+.+|+|+-
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~--t~gg~Dvvid 267 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEK--TNGGVDYAVE 267 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHH--TTSCBSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHH--hCCCCCEEEE
Confidence 5678999999986 8888888764 56 7999999999999988753222222110 0011122222 1237999996
Q ss_pred ccccccCChhHHHHHHHHHhcCCC-cEEEEEec
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPN-GVIATWCY 138 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pg-G~l~~~~~ 138 (265)
.. .....+..+.++|+ ++ |+++....
T Consensus 268 ~~-----g~~~~~~~~~~~l~-~~~G~iv~~G~ 294 (373)
T 1p0f_A 268 CA-----GRIETMMNALQSTY-CGSGVTVVLGL 294 (373)
T ss_dssp CS-----CCHHHHHHHHHTBC-TTTCEEEECCC
T ss_pred CC-----CCHHHHHHHHHHHh-cCCCEEEEEcc
Confidence 52 23467899999999 99 99987554
No 324
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.52 E-value=0.013 Score=51.03 Aligned_cols=77 Identities=10% Similarity=0.006 Sum_probs=54.3
Q ss_pred CeEEEEcCCcchhHHHHHhcCCc-EEEEcCCHHHHHHHHc-CCCceEEecCCccchh-hhhhccCCCCceeEEEeccccc
Q 024647 35 ELAWDVGTGSGQAAASLSGIFEN-VIGTETSPKQIEFATK-LPNIRYELTSPAMSIA-ELEQNVAAQSTVDLVTIAQAMH 111 (265)
Q Consensus 35 ~~vlDvGcG~G~~~~~l~~~~~~-v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~-d~~~~~~~~~~~Dlv~~~~~~~ 111 (265)
.+++|+-||.|.++..+.+.+.+ +.++|+++..++..+. .++..+...++.-... ++.........+|+|+....+.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpPCQ 82 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPCQ 82 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCCCC
Confidence 57999999999999999998876 6799999999987764 4667777655422111 1111111346799999877543
No 325
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.49 E-value=0.011 Score=50.91 Aligned_cols=102 Identities=11% Similarity=0.105 Sum_probs=67.8
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHhc-CCc-EEEEcCCHHHHHHHHcCC-Cc-eEEec--CCccchhhhhhccCCCCceeE
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSGI-FEN-VIGTETSPKQIEFATKLP-NI-RYELT--SPAMSIAELEQNVAAQSTVDL 103 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~~-v~~vD~s~~~~~~a~~~~-~~-~~~~~--~~~~~~~d~~~~~~~~~~~Dl 103 (265)
..++++||-+|+|. |.++..+++. +++ |+++|.++.-++.++++. .+ .+... ..+.....+... .....+|+
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~-t~g~g~Dv 255 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVES-FGGIEPAV 255 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHH-TSSCCCSE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHH-hCCCCCCE
Confidence 45778899999986 8888888875 555 999999999999888652 11 11110 000001112222 23457999
Q ss_pred EEeccccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 104 VTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 104 v~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
|+-.. .....++.+.++|+ +||++++....
T Consensus 256 vid~~-----g~~~~~~~~~~~l~-~~G~iv~~G~~ 285 (363)
T 3m6i_A 256 ALECT-----GVESSIAAAIWAVK-FGGKVFVIGVG 285 (363)
T ss_dssp EEECS-----CCHHHHHHHHHHSC-TTCEEEECCCC
T ss_pred EEECC-----CChHHHHHHHHHhc-CCCEEEEEccC
Confidence 99752 33457899999999 99999886543
No 326
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.48 E-value=0.015 Score=49.56 Aligned_cols=99 Identities=12% Similarity=0.072 Sum_probs=66.4
Q ss_pred CCCCeEEEEcC-C-cchhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 32 TNHELAWDVGT-G-SGQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 32 ~~~~~vlDvGc-G-~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
.++++||-.|+ | .|..+..+++ .+++|++++.++..++.++++................+... .....+|+|+.+.
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~-~~~~g~D~vid~~ 225 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKF-TNGKGVDASFDSV 225 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHH-TTTSCEEEEEECC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHH-hCCCCceEEEECC
Confidence 56789999994 4 4777777766 46799999999999998887543333332211111222222 2345799999754
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
. ...++.+.+.|+ ++|+++....
T Consensus 226 g------~~~~~~~~~~l~-~~G~iv~~G~ 248 (334)
T 3qwb_A 226 G------KDTFEISLAALK-RKGVFVSFGN 248 (334)
T ss_dssp G------GGGHHHHHHHEE-EEEEEEECCC
T ss_pred C------hHHHHHHHHHhc-cCCEEEEEcC
Confidence 3 257888999999 9999987553
No 327
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.46 E-value=0.005 Score=52.85 Aligned_cols=91 Identities=15% Similarity=0.034 Sum_probs=66.0
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
..++++||-+|+|. |.++..+++. +++|+++|.++..++.++++..-... .+ .+.+ .. .+|+|+-..
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~-------~~~~--~~-~~D~vid~~ 242 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY-TD-------PKQC--KE-ELDFIISTI 242 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE-SS-------GGGC--CS-CEEEEEECC
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec-CC-------HHHH--hc-CCCEEEECC
Confidence 45778999999986 8888888764 67999999999999999875433333 21 1222 12 799998643
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
. ....++.+.+.|+ ++|++++...
T Consensus 243 g-----~~~~~~~~~~~l~-~~G~iv~~G~ 266 (348)
T 3two_A 243 P-----THYDLKDYLKLLT-YNGDLALVGL 266 (348)
T ss_dssp C-----SCCCHHHHHTTEE-EEEEEEECCC
T ss_pred C-----cHHHHHHHHHHHh-cCCEEEEECC
Confidence 2 2347888999999 9999998654
No 328
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.37 E-value=0.048 Score=46.43 Aligned_cols=102 Identities=13% Similarity=0.052 Sum_probs=67.8
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHhc-CC-cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEec
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSGI-FE-NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~ 107 (265)
..++++||-.|+|. |.++..+++. ++ .++++|.++.-++.++++.........-.........+ .....+|+|+..
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~-~~~~g~d~v~d~ 236 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVL-RELRFNQLILET 236 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHH-GGGCSSEEEEEC
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhh-cccCCccccccc
Confidence 35778999999986 6677777765 44 47899999999999988644444432221111111222 233467888764
Q ss_pred cccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 108 QAMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 108 ~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
......++.+.++|+ +||.+++....
T Consensus 237 -----~G~~~~~~~~~~~l~-~~G~~v~~g~~ 262 (346)
T 4a2c_A 237 -----AGVPQTVELAVEIAG-PHAQLALVGTL 262 (346)
T ss_dssp -----SCSHHHHHHHHHHCC-TTCEEEECCCC
T ss_pred -----ccccchhhhhhheec-CCeEEEEEecc
Confidence 234578899999999 99999876543
No 329
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.36 E-value=0.025 Score=48.91 Aligned_cols=99 Identities=12% Similarity=0.002 Sum_probs=66.2
Q ss_pred CCCCeEEEEcCCc-chhHHHHHhc-CC-cEEEEcCCHHHHHHHHcCCCceEEecCC--ccchhhhhhccCCCCceeEEEe
Q 024647 32 TNHELAWDVGTGS-GQAAASLSGI-FE-NVIGTETSPKQIEFATKLPNIRYELTSP--AMSIAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 32 ~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~Dlv~~ 106 (265)
.++++||-+|+|. |.++..+++. ++ +|+++|.++..++.++++.........- +.....+..+ ..+.+|+|+-
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~--~~~g~D~vid 267 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEM--SNGGVDFSFE 267 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHH--TTSCBSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHH--hCCCCcEEEE
Confidence 5678999999986 7888888764 56 6999999999999888753222222110 0001112222 1247999986
Q ss_pred ccccccCChhHHHHHHHHHhcCCC-cEEEEEec
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPN-GVIATWCY 138 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pg-G~l~~~~~ 138 (265)
.. .....+..+.+.|+ ++ |++++...
T Consensus 268 ~~-----g~~~~~~~~~~~l~-~~~G~iv~~G~ 294 (374)
T 2jhf_A 268 VI-----GRLDTMVTALSCCQ-EAYGVSVIVGV 294 (374)
T ss_dssp CS-----CCHHHHHHHHHHBC-TTTCEEEECSC
T ss_pred CC-----CCHHHHHHHHHHhh-cCCcEEEEecc
Confidence 52 23467899999999 99 99987654
No 330
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.34 E-value=0.018 Score=49.80 Aligned_cols=99 Identities=14% Similarity=0.040 Sum_probs=66.1
Q ss_pred CCCCeEEEEcCCc-chhHHHHHhc-CC-cEEEEcCCHHHHHHHHcCCCceEEecCC--ccchhhhhhccCCCCceeEEEe
Q 024647 32 TNHELAWDVGTGS-GQAAASLSGI-FE-NVIGTETSPKQIEFATKLPNIRYELTSP--AMSIAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 32 ~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~Dlv~~ 106 (265)
.++++||-+|+|. |.++..+++. ++ +|+++|.++..++.++++.........- +.....+.... .+.+|+|+-
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~--~~g~D~vid 268 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMT--NGGVDFSLE 268 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHH--TSCBSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHh--CCCCCEEEE
Confidence 5678999999986 7888888765 55 6999999999999888753222222110 00011122221 237999986
Q ss_pred ccccccCChhHHHHHHHHHhcCCC-cEEEEEec
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPN-GVIATWCY 138 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pg-G~l~~~~~ 138 (265)
.. .....++.+.++|+ ++ |++++...
T Consensus 269 ~~-----g~~~~~~~~~~~l~-~~~G~iv~~G~ 295 (374)
T 1cdo_A 269 CV-----GNVGVMRNALESCL-KGWGVSVLVGW 295 (374)
T ss_dssp CS-----CCHHHHHHHHHTBC-TTTCEEEECSC
T ss_pred CC-----CCHHHHHHHHHHhh-cCCcEEEEEcC
Confidence 52 23467899999999 99 99987654
No 331
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.33 E-value=0.013 Score=49.72 Aligned_cols=99 Identities=15% Similarity=0.111 Sum_probs=66.2
Q ss_pred CCCCeEEEEc-CC-cchhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 32 TNHELAWDVG-TG-SGQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 32 ~~~~~vlDvG-cG-~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
.++++||-.| +| .|..+..+++ .+++|++++.++..++.++++................+.+. .....+|+|+.+.
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~-~~~~g~Dvvid~~ 217 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLEL-TDGKKCPVVYDGV 217 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHH-TTTCCEEEEEESS
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHH-hCCCCceEEEECC
Confidence 5678999999 44 4777777776 47799999999999998886432223322211111222222 2345799999754
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
. ...+..+.+.|+ ++|+++....
T Consensus 218 g------~~~~~~~~~~l~-~~G~iv~~g~ 240 (325)
T 3jyn_A 218 G------QDTWLTSLDSVA-PRGLVVSFGN 240 (325)
T ss_dssp C------GGGHHHHHTTEE-EEEEEEECCC
T ss_pred C------hHHHHHHHHHhc-CCCEEEEEec
Confidence 3 256788899999 9999988654
No 332
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.32 E-value=0.0092 Score=51.71 Aligned_cols=95 Identities=19% Similarity=0.183 Sum_probs=65.9
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhh-hhhccCCCCceeEEEec
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAE-LEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~Dlv~~~ 107 (265)
..++++||-+|+|. |.++..+++. +++|+++|.++..++.++++.........- .+ ++.+. +.+|+|+..
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~----~~~~~~~~---~g~Dvvid~ 264 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRN----ADEMAAHL---KSFDFILNT 264 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTC----HHHHHTTT---TCEEEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEecccc----HHHHHHhh---cCCCEEEEC
Confidence 45778999999986 8888888764 568999999999999888643222332211 12 22221 579999865
Q ss_pred cccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 108 QAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 108 ~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.. ....++.+.+.|+ ++|+++....
T Consensus 265 ~g-----~~~~~~~~~~~l~-~~G~iv~~G~ 289 (369)
T 1uuf_A 265 VA-----APHNLDDFTTLLK-RDGTMTLVGA 289 (369)
T ss_dssp CS-----SCCCHHHHHTTEE-EEEEEEECCC
T ss_pred CC-----CHHHHHHHHHHhc-cCCEEEEecc
Confidence 32 2345788899999 9999987554
No 333
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.32 E-value=0.018 Score=49.03 Aligned_cols=99 Identities=14% Similarity=0.037 Sum_probs=66.3
Q ss_pred CCCCCeEEEEcC--CcchhHHHHHh-cCCcEEEEcCCHHHHHHH-HcCCCceEEecCCccchhhhhhccCCCCceeEEEe
Q 024647 31 TTNHELAWDVGT--GSGQAAASLSG-IFENVIGTETSPKQIEFA-TKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 31 ~~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~ 106 (265)
..++++||-.|| |.|..+..+++ .+++|+++|.+++.++.+ +++................+.+.. .+.+|+|+.
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~d~vi~ 224 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKREC--PKGIDVFFD 224 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHC--TTCEEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhc--CCCceEEEE
Confidence 357789999998 34777777765 467999999999999988 654322222221111112222332 357999987
Q ss_pred ccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+.. ...+..+.+.|+ ++|++++...
T Consensus 225 ~~g------~~~~~~~~~~l~-~~G~iv~~G~ 249 (336)
T 4b7c_A 225 NVG------GEILDTVLTRIA-FKARIVLCGA 249 (336)
T ss_dssp SSC------HHHHHHHHTTEE-EEEEEEECCC
T ss_pred CCC------cchHHHHHHHHh-hCCEEEEEee
Confidence 543 247889999999 9999987543
No 334
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.29 E-value=0.02 Score=49.50 Aligned_cols=99 Identities=12% Similarity=0.013 Sum_probs=66.0
Q ss_pred CCCCeEEEEcCCc-chhHHHHHhc-CC-cEEEEcCCHHHHHHHHcCCCceEEecCC--ccchhhhhhccCCCCceeEEEe
Q 024647 32 TNHELAWDVGTGS-GQAAASLSGI-FE-NVIGTETSPKQIEFATKLPNIRYELTSP--AMSIAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 32 ~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~Dlv~~ 106 (265)
.++++||-+|+|. |.++..+++. ++ +|+++|.++..++.++++.........- ......+.++ ..+.+|+|+-
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~--~~~g~D~vid 266 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEM--TDGGVDYSFE 266 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHH--TTSCBSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHH--hCCCCCEEEE
Confidence 5678999999886 7888888764 56 7999999999999888643222222110 0001122222 1247999986
Q ss_pred ccccccCChhHHHHHHHHHhcCCC-cEEEEEec
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPN-GVIATWCY 138 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pg-G~l~~~~~ 138 (265)
.. .....++.+.+.|+ ++ |++++...
T Consensus 267 ~~-----g~~~~~~~~~~~l~-~~~G~iv~~G~ 293 (373)
T 2fzw_A 267 CI-----GNVKVMRAALEACH-KGWGVSVVVGV 293 (373)
T ss_dssp CS-----CCHHHHHHHHHTBC-TTTCEEEECSC
T ss_pred CC-----CcHHHHHHHHHhhc-cCCcEEEEEec
Confidence 52 23467899999999 99 99987654
No 335
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.29 E-value=0.012 Score=50.23 Aligned_cols=99 Identities=19% Similarity=0.092 Sum_probs=63.8
Q ss_pred CCCCeEEEEcCC--cchhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 32 TNHELAWDVGTG--SGQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 32 ~~~~~vlDvGcG--~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
.++++||-+||| .|..+..+++ .+++|+++|.++..++.++++................+... .....+|+|+.+.
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~-~~~~g~Dvvid~~ 221 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMEL-TNGIGADAAIDSI 221 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHH-TTTSCEEEEEESS
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHH-hCCCCCcEEEECC
Confidence 567899999997 4777777765 57799999999998888876432223322211111122222 2345799999753
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
. . ..+.+..+.|+ ++|+++....
T Consensus 222 g-----~-~~~~~~~~~l~-~~G~iv~~G~ 244 (340)
T 3gms_A 222 G-----G-PDGNELAFSLR-PNGHFLTIGL 244 (340)
T ss_dssp C-----H-HHHHHHHHTEE-EEEEEEECCC
T ss_pred C-----C-hhHHHHHHHhc-CCCEEEEEee
Confidence 2 1 23344558999 9999987654
No 336
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.26 E-value=0.014 Score=49.91 Aligned_cols=97 Identities=11% Similarity=0.038 Sum_probs=65.8
Q ss_pred CCCeEEEEcCCc-chhHHHHHhc---CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 33 NHELAWDVGTGS-GQAAASLSGI---FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
++++||-+|+|. |.++..+++. +++|+++|.++..++.++++.........- .....+.+. ....+|+|+...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~--~~~~~~~~~-~g~g~D~vid~~ 246 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKD--AESLINKLT-DGLGASIAIDLV 246 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHH--HHHHHHHHH-TTCCEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEecccc--chHHHHHhh-cCCCccEEEECC
Confidence 778999999986 7778887764 578999999999999887643222222100 001122221 233799999753
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.....++.+.++|+ ++|+++....
T Consensus 247 -----g~~~~~~~~~~~l~-~~G~iv~~g~ 270 (344)
T 2h6e_A 247 -----GTEETTYNLGKLLA-QEGAIILVGM 270 (344)
T ss_dssp -----CCHHHHHHHHHHEE-EEEEEEECCC
T ss_pred -----CChHHHHHHHHHhh-cCCEEEEeCC
Confidence 23457899999999 9999987554
No 337
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.25 E-value=0.024 Score=49.08 Aligned_cols=99 Identities=14% Similarity=-0.018 Sum_probs=66.4
Q ss_pred CCCCeEEEEcCCc-chhHHHHHhc-CC-cEEEEcCCHHHHHHHHcCCCceEEecCC--ccchhhhhhccCCCCceeEEEe
Q 024647 32 TNHELAWDVGTGS-GQAAASLSGI-FE-NVIGTETSPKQIEFATKLPNIRYELTSP--AMSIAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 32 ~~~~~vlDvGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~Dlv~~ 106 (265)
.++++||-+|+|. |.++..+++. ++ +|+++|.++..++.++++.........- +.....+..+. . +.+|+|+-
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~-~-~g~Dvvid 271 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELT-A-GGVDYSLD 271 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHH-T-SCBSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHh-C-CCccEEEE
Confidence 4678999999986 8888888875 56 6999999999999888753222222110 00011122221 2 37999986
Q ss_pred ccccccCChhHHHHHHHHHhcCCC-cEEEEEec
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPN-GVIATWCY 138 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pg-G~l~~~~~ 138 (265)
.. .....++.+.++|+ ++ |++++...
T Consensus 272 ~~-----G~~~~~~~~~~~l~-~~~G~iv~~G~ 298 (376)
T 1e3i_A 272 CA-----GTAQTLKAAVDCTV-LGWGSCTVVGA 298 (376)
T ss_dssp SS-----CCHHHHHHHHHTBC-TTTCEEEECCC
T ss_pred CC-----CCHHHHHHHHHHhh-cCCCEEEEECC
Confidence 52 23467899999999 99 99987654
No 338
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.25 E-value=0.029 Score=47.90 Aligned_cols=101 Identities=15% Similarity=0.151 Sum_probs=65.4
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHh-c-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEec
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSG-I-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~ 107 (265)
..++++||-+|+|+ |.++..+++ . +.+|+++|.+++-++.+++......+...-......+.+. .....+|.++..
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~-t~g~g~d~~~~~ 239 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKI-TGGLGVQSAIVC 239 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHH-TTSSCEEEEEEC
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhh-cCCCCceEEEEe
Confidence 35778999999997 455555554 3 4689999999999988887543333332211111222333 234457777653
Q ss_pred cccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 108 QAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 108 ~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
......+..+.+.|+ ++|++++...
T Consensus 240 -----~~~~~~~~~~~~~l~-~~G~~v~~g~ 264 (348)
T 4eez_A 240 -----AVARIAFEQAVASLK-PMGKMVAVAV 264 (348)
T ss_dssp -----CSCHHHHHHHHHTEE-EEEEEEECCC
T ss_pred -----ccCcchhheeheeec-CCceEEEEec
Confidence 223568899999999 9999987554
No 339
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.22 E-value=0.022 Score=48.38 Aligned_cols=98 Identities=15% Similarity=0.054 Sum_probs=63.7
Q ss_pred CCCCeEEEEcC--CcchhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCC-ccchhhhhhccCCCCceeEEEec
Q 024647 32 TNHELAWDVGT--GSGQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSP-AMSIAELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 32 ~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~Dlv~~~ 107 (265)
.++++||-.|| |.|..+..+++ .+++|+++|.++..++.++++.........- +.....+.... . +.+|+++.+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~-~-~~~d~vi~~ 221 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKAS-P-DGYDCYFDN 221 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHC-T-TCEEEEEES
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHh-C-CCCeEEEEC
Confidence 56789999998 44666666654 5679999999999888886543212222111 11112222221 2 579999876
Q ss_pred cccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 108 QAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 108 ~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.. ...+..+.+.|+ +||++++...
T Consensus 222 ~g------~~~~~~~~~~l~-~~G~~v~~g~ 245 (333)
T 1v3u_A 222 VG------GEFLNTVLSQMK-DFGKIAICGA 245 (333)
T ss_dssp SC------HHHHHHHHTTEE-EEEEEEECCC
T ss_pred CC------hHHHHHHHHHHh-cCCEEEEEec
Confidence 44 245888899999 9999987554
No 340
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.13 E-value=0.029 Score=47.99 Aligned_cols=96 Identities=22% Similarity=0.291 Sum_probs=65.0
Q ss_pred CCCeEEEE-cCCc-chhHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 33 NHELAWDV-GTGS-GQAAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 33 ~~~~vlDv-GcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
++++||-. |+|. |..+..+++. +++|++++.++.-++.++++.........- .....+.+. ..+.+|+|+..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~--~~~g~Dvv~d~-- 224 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKE-SLLNQFKTQ--GIELVDYVFCT-- 224 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTS-CHHHHHHHH--TCCCEEEEEES--
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCc-cHHHHHHHh--CCCCccEEEEC--
Confidence 67889998 5664 7888777764 679999999999999888743222222111 111223333 34579999964
Q ss_pred cccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 110 MHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 110 ~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
......++.+.++|+ ++|+++...
T Consensus 225 ---~g~~~~~~~~~~~l~-~~G~iv~~~ 248 (346)
T 3fbg_A 225 ---FNTDMYYDDMIQLVK-PRGHIATIV 248 (346)
T ss_dssp ---SCHHHHHHHHHHHEE-EEEEEEESS
T ss_pred ---CCchHHHHHHHHHhc-cCCEEEEEC
Confidence 234567899999999 999997643
No 341
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=96.12 E-value=0.029 Score=48.24 Aligned_cols=93 Identities=22% Similarity=0.191 Sum_probs=63.3
Q ss_pred CeEEEEcCCc-chhH-HHHH-hc-CCc-EEEEcCCHH---HHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEe
Q 024647 35 ELAWDVGTGS-GQAA-ASLS-GI-FEN-VIGTETSPK---QIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 35 ~~vlDvGcG~-G~~~-~~l~-~~-~~~-v~~vD~s~~---~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~ 106 (265)
++||-+|+|. |.++ ..++ +. +++ |+++|.+++ .++.++++. .......-..... +.++ .+.+|+|+-
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lG-a~~v~~~~~~~~~-i~~~---~gg~Dvvid 248 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELD-ATYVDSRQTPVED-VPDV---YEQMDFIYE 248 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTT-CEEEETTTSCGGG-HHHH---SCCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcC-CcccCCCccCHHH-HHHh---CCCCCEEEE
Confidence 8999999976 8888 8888 64 566 999999988 888887653 2222211100111 2233 237999986
Q ss_pred ccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.. .....++.+.++|+ ++|+++....
T Consensus 249 ~~-----g~~~~~~~~~~~l~-~~G~iv~~g~ 274 (357)
T 2b5w_A 249 AT-----GFPKHAIQSVQALA-PNGVGALLGV 274 (357)
T ss_dssp CS-----CCHHHHHHHHHHEE-EEEEEEECCC
T ss_pred CC-----CChHHHHHHHHHHh-cCCEEEEEeC
Confidence 52 23457899999999 9999987554
No 342
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.02 E-value=0.0089 Score=50.84 Aligned_cols=56 Identities=18% Similarity=0.154 Sum_probs=49.5
Q ss_pred CCcHHHHHHHHhh-CCCCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCH---HHHHHHHc
Q 024647 18 NYPEELFKFITSK-TTNHELAWDVGTGSGQAAASLSGIFENVIGTETSP---KQIEFATK 73 (265)
Q Consensus 18 ~y~~~l~~~l~~~-~~~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~---~~~~~a~~ 73 (265)
.+|.++++.+... .++++.|||--||+|+.+.+..+.+.+.+|+|+++ ..++.+++
T Consensus 226 ~kp~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~ 285 (319)
T 1eg2_A 226 QKPAAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLT 285 (319)
T ss_dssp CCCHHHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHH
Confidence 4688999988765 46789999999999999999999999999999999 88888774
No 343
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.95 E-value=0.089 Score=44.90 Aligned_cols=102 Identities=10% Similarity=0.128 Sum_probs=64.3
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCc--EEEEcCCHHHHHHHHc----C-----------------------CCceEEecC
Q 024647 33 NHELAWDVGTGSGQAAASLSGIFEN--VIGTETSPKQIEFATK----L-----------------------PNIRYELTS 83 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~~--v~~vD~s~~~~~~a~~----~-----------------------~~~~~~~~~ 83 (265)
+...|+.+|||.......+...++. ++-||. |.+++.-++ . .+..++..+
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 4467999999999999999876554 555665 666553322 1 345666655
Q ss_pred Cccchh--h-hhhccCCCCceeEEEeccccccCChh---HHHHHHHHHhcCCCcEEEEEec
Q 024647 84 PAMSIA--E-LEQNVAAQSTVDLVTIAQAMHWFDLP---QFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 84 ~~~~~~--d-~~~~~~~~~~~Dlv~~~~~~~~~~~~---~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.+...- . +...+ ..+...++++-.+++|++++ .+++.+.+.. |+|.+++...
T Consensus 176 L~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~--~~~~~v~~e~ 233 (334)
T 1rjd_A 176 LNDITETTRLLDVCT-KREIPTIVISECLLCYMHNNESQLLINTIMSKF--SHGLWISYDP 233 (334)
T ss_dssp TTCHHHHHHHHHTTC-CTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC--SSEEEEEEEE
T ss_pred CCCcHHHHHHHHhcC-CCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC--CCcEEEEEec
Confidence 432100 0 12232 33567889999999999766 4566666654 5777765544
No 344
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.94 E-value=0.064 Score=43.98 Aligned_cols=119 Identities=7% Similarity=0.077 Sum_probs=74.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc---------CCcEEEEc-----CCH----------------------HHHHHH-H--
Q 024647 32 TNHELAWDVGTGSGQAAASLSGI---------FENVIGTE-----TSP----------------------KQIEFA-T-- 72 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~---------~~~v~~vD-----~s~----------------------~~~~~a-~-- 72 (265)
.-+..|+|+||-.|..+..++.. ..+|++.| +.+ ..++.. +
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 44678999999999988887541 24699999 432 111111 0
Q ss_pred ----c----CCCceEEecCCccchhhhhhc--cCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEecCCCC
Q 024647 73 ----K----LPNIRYELTSPAMSIAELEQN--VAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYTVPE 142 (265)
Q Consensus 73 ----~----~~~~~~~~~~~~~~~~d~~~~--~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~ 142 (265)
. ..++.++.+....+ +..+ ..+.+++|+|....-. +-.....++.+...|+ |||++++-++..+.
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dT---L~~~l~~~~~~~~dlv~ID~D~-Y~~t~~~le~~~p~l~-~GGvIv~DD~~~~~ 222 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRET---VPRYLAENPQTVIALAYFDLDL-YEPTKAVLEAIRPYLT-KGSIVAFDELDNPK 222 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHH---HHHHHHHCTTCCEEEEEECCCC-HHHHHHHHHHHGGGEE-EEEEEEESSTTCTT
T ss_pred hhhhhcCCCCCcEEEEEecHHHH---HHHHHHhCCCCceEEEEEcCcc-cchHHHHHHHHHHHhC-CCcEEEEcCCCCCC
Confidence 1 15677777554211 1111 0245579999987531 2234457888999999 99999997775444
Q ss_pred CChHHHHhhccccc
Q 024647 143 VNVSVDAVFQPFYT 156 (265)
Q Consensus 143 ~~~~~~~~~~~~~~ 156 (265)
+ +...+++.++..
T Consensus 223 w-~G~~~A~~ef~~ 235 (257)
T 3tos_A 223 W-PGENIAMRKVLG 235 (257)
T ss_dssp C-THHHHHHHHHTC
T ss_pred C-hHHHHHHHHHHh
Confidence 4 356666666655
No 345
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.93 E-value=0.021 Score=48.82 Aligned_cols=100 Identities=10% Similarity=0.016 Sum_probs=64.9
Q ss_pred CCCCCeEEEEcC--CcchhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecC-CccchhhhhhccCCCCceeEEEe
Q 024647 31 TTNHELAWDVGT--GSGQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTS-PAMSIAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 31 ~~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~Dlv~~ 106 (265)
..++++||-.|+ |.|..+..+++ .+++|+++|.++..++.+++.......... .+.....+.... .. .+|+|+.
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~-~~-~~D~vi~ 244 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKAT-DG-GAHGVIN 244 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHH-TS-CEEEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHh-CC-CCCEEEE
Confidence 356789999999 35777766665 567999999999888887764322222211 111111222221 22 6999987
Q ss_pred ccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+.. ....++.+.+.|+ ++|+++....
T Consensus 245 ~~g-----~~~~~~~~~~~l~-~~G~iv~~g~ 270 (347)
T 2hcy_A 245 VSV-----SEAAIEASTRYVR-ANGTTVLVGM 270 (347)
T ss_dssp CSS-----CHHHHHHHTTSEE-EEEEEEECCC
T ss_pred CCC-----cHHHHHHHHHHHh-cCCEEEEEeC
Confidence 643 3468899999999 9999987554
No 346
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.90 E-value=0.022 Score=48.74 Aligned_cols=101 Identities=17% Similarity=0.117 Sum_probs=64.9
Q ss_pred CCCCCeEEEEcCC--cchhHHHHHh-c-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEe
Q 024647 31 TTNHELAWDVGTG--SGQAAASLSG-I-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 31 ~~~~~~vlDvGcG--~G~~~~~l~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~ 106 (265)
..++++||-.|+| .|..+..+++ . +++|+++|.++..++.++++.........-......+..+. ..+.+|+|+.
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~d~vi~ 246 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRIT-ESKGVDAVID 246 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHT-TTSCEEEEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHh-cCCCceEEEE
Confidence 4577899999998 4566666654 4 78999999999998888764222222211100001122221 1147999986
Q ss_pred ccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+.. ....++.+.++|+ ++|+++....
T Consensus 247 ~~g-----~~~~~~~~~~~l~-~~G~iv~~g~ 272 (347)
T 1jvb_A 247 LNN-----SEKTLSVYPKALA-KQGKYVMVGL 272 (347)
T ss_dssp SCC-----CHHHHTTGGGGEE-EEEEEEECCS
T ss_pred CCC-----CHHHHHHHHHHHh-cCCEEEEECC
Confidence 532 3457888899999 9999987544
No 347
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.88 E-value=0.031 Score=47.71 Aligned_cols=99 Identities=16% Similarity=0.043 Sum_probs=64.7
Q ss_pred CCCCeEEEEcC--CcchhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 32 TNHELAWDVGT--GSGQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 32 ~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
.++++||-.|+ |.|..+..+++ .+.+|+++|.++..++.++++.........-......+.+. .....+|+|+.+.
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~-~~~~~~d~vi~~~ 243 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRL-TGGKGADKVVDHT 243 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHH-TTTTCEEEEEESS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHH-hCCCCceEEEECC
Confidence 46789999998 45777777765 46799999999999888875322222221110001112222 1234799999764
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
. ...++.+.+.|+ ++|+++....
T Consensus 244 g------~~~~~~~~~~l~-~~G~~v~~g~ 266 (343)
T 2eih_A 244 G------ALYFEGVIKATA-NGGRIAIAGA 266 (343)
T ss_dssp C------SSSHHHHHHHEE-EEEEEEESSC
T ss_pred C------HHHHHHHHHhhc-cCCEEEEEec
Confidence 3 346788899999 9999987544
No 348
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.88 E-value=0.04 Score=47.27 Aligned_cols=99 Identities=13% Similarity=0.082 Sum_probs=64.0
Q ss_pred CCCCeEEEEcC--CcchhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 32 TNHELAWDVGT--GSGQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 32 ~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
.++++||-.|+ |.|..+..+++ .+++|++++.+++.++.++++.........-......+.+. .....+|+|+.+.
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~-~~~~~~D~vi~~~ 247 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKY-VGEKGIDIIIEML 247 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHH-HCTTCEEEEEESC
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHH-cCCCCcEEEEECC
Confidence 56789999997 34666666665 56799999999998888876532222221111001112222 1234799998764
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
. ...+..+.+.|+ ++|++++...
T Consensus 248 G------~~~~~~~~~~l~-~~G~iv~~g~ 270 (351)
T 1yb5_A 248 A------NVNLSKDLSLLS-HGGRVIVVGS 270 (351)
T ss_dssp H------HHHHHHHHHHEE-EEEEEEECCC
T ss_pred C------hHHHHHHHHhcc-CCCEEEEEec
Confidence 3 246788899999 9999987653
No 349
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.84 E-value=0.0064 Score=52.28 Aligned_cols=87 Identities=13% Similarity=0.141 Sum_probs=57.9
Q ss_pred CCeEEEEcCCcchhHHHHHhcC--C-cEEEEcCCHHHHHHHHc-CCCceEEecCCccchhhhhhcc---CCCCceeEEEe
Q 024647 34 HELAWDVGTGSGQAAASLSGIF--E-NVIGTETSPKQIEFATK-LPNIRYELTSPAMSIAELEQNV---AAQSTVDLVTI 106 (265)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~~~~--~-~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~~---~~~~~~Dlv~~ 106 (265)
..+++|+-||.|.++..+.+.+ . .|.++|+++..++..+. .++..+...+ +.++. ++...+|+|+.
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~D-------i~~~~~~~~~~~~~D~l~~ 74 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKT-------IEGITLEEFDRLSFDMILM 74 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSC-------GGGCCHHHHHHHCCSEEEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCC-------HHHccHhHcCcCCcCEEEE
Confidence 3579999999999999999887 3 48999999999998775 4555556644 33331 11125899999
Q ss_pred ccccccC----------C-hhHHHHHHHHHhc
Q 024647 107 AQAMHWF----------D-LPQFYNQVKWVLK 127 (265)
Q Consensus 107 ~~~~~~~----------~-~~~~l~~~~~~Lk 127 (265)
...+.-+ | ...++.++.++++
T Consensus 75 gpPCq~fS~ag~~~g~~d~r~~l~~~~~~~i~ 106 (343)
T 1g55_A 75 SPPCQPFTRIGRQGDMTDSRTNSFLHILDILP 106 (343)
T ss_dssp CCC------------------CHHHHHHHHGG
T ss_pred cCCCcchhhcCCcCCccCccchHHHHHHHHHH
Confidence 7754322 1 1135666777775
No 350
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=95.81 E-value=0.028 Score=48.22 Aligned_cols=98 Identities=18% Similarity=0.154 Sum_probs=64.7
Q ss_pred CCCCeEEEEc-CC-cchhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 32 TNHELAWDVG-TG-SGQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 32 ~~~~~vlDvG-cG-~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
.++++||-.| +| .|..+..+++ .+++|+++|.++..++.++++................+.... .+.+|+|+.+.
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~--~~g~Dvvid~~ 243 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAET--GQGVDIILDMI 243 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH--SSCEEEEEESC
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHh--CCCceEEEECC
Confidence 5678899994 44 4777777766 467999999999999988864322233222111112222232 45799999754
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
. ...+..+.+.|+ ++|+++....
T Consensus 244 g------~~~~~~~~~~l~-~~G~iv~~g~ 266 (353)
T 4dup_A 244 G------AAYFERNIASLA-KDGCLSIIAF 266 (353)
T ss_dssp C------GGGHHHHHHTEE-EEEEEEECCC
T ss_pred C------HHHHHHHHHHhc-cCCEEEEEEe
Confidence 3 236788899999 9999987554
No 351
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.66 E-value=0.025 Score=48.38 Aligned_cols=98 Identities=15% Similarity=0.116 Sum_probs=64.7
Q ss_pred CCCCeEEEEcC-C-cchhHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 32 TNHELAWDVGT-G-SGQAAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 32 ~~~~~vlDvGc-G-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
.++++||-.|+ | .|..+..+++. +++|++++.++..++.++++......... ......+... .....+|+|+.+.
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~-~~~~g~Dvvid~~ 235 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREA-TGGAGVDMVVDPI 235 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHH-TTTSCEEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHH-hCCCCceEEEECC
Confidence 56789999998 4 47888777764 67999999999988888864332233222 1111222222 2334799999754
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.- ..+..+.+.|+ ++|++++...
T Consensus 236 g~------~~~~~~~~~l~-~~G~iv~~G~ 258 (342)
T 4eye_A 236 GG------PAFDDAVRTLA-SEGRLLVVGF 258 (342)
T ss_dssp C--------CHHHHHHTEE-EEEEEEEC--
T ss_pred ch------hHHHHHHHhhc-CCCEEEEEEc
Confidence 32 36788899999 9999987543
No 352
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.61 E-value=0.062 Score=45.78 Aligned_cols=98 Identities=15% Similarity=0.118 Sum_probs=64.7
Q ss_pred CCCCeEEEEcC--CcchhHHHHHh-cCCcEEEEcCCHHHHHHHH-cCCCceEEecC-CccchhhhhhccCCCCceeEEEe
Q 024647 32 TNHELAWDVGT--GSGQAAASLSG-IFENVIGTETSPKQIEFAT-KLPNIRYELTS-PAMSIAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 32 ~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~Dlv~~ 106 (265)
.++++||-.|| |.|..+..+++ .+++|+++|.++..++.++ ++......... .......+.... .+.+|+|+.
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~--~~~~d~vi~ 231 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCF--PNGIDIYFE 231 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHC--TTCEEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHh--CCCCcEEEE
Confidence 56789999998 35777777765 5679999999999998887 44322222211 101112223321 257999987
Q ss_pred ccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+.. ...++.+.+.|+ ++|++++...
T Consensus 232 ~~g------~~~~~~~~~~l~-~~G~~v~~G~ 256 (345)
T 2j3h_A 232 NVG------GKMLDAVLVNMN-MHGRIAVCGM 256 (345)
T ss_dssp SSC------HHHHHHHHTTEE-EEEEEEECCC
T ss_pred CCC------HHHHHHHHHHHh-cCCEEEEEcc
Confidence 643 247889999999 9999987543
No 353
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.55 E-value=0.071 Score=45.90 Aligned_cols=99 Identities=21% Similarity=0.148 Sum_probs=66.0
Q ss_pred CCCCCeEEEEc-CC-cchhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEec
Q 024647 31 TTNHELAWDVG-TG-SGQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 31 ~~~~~~vlDvG-cG-~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~ 107 (265)
..++++||-.| +| .|..+..+++ .+++|++++.+++.++.++++.........-......+... ..+.+|+|+..
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~--~~~g~D~vid~ 238 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQE--YPEGVDVVYES 238 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHH--CTTCEEEEEEC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHh--cCCCCCEEEEC
Confidence 35678999999 34 4888877776 46789999999998888886532222222111111122222 13469999976
Q ss_pred cccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 108 QAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 108 ~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.. ...++.+.+.|+ ++|++++...
T Consensus 239 ~g------~~~~~~~~~~l~-~~G~iv~~g~ 262 (362)
T 2c0c_A 239 VG------GAMFDLAVDALA-TKGRLIVIGF 262 (362)
T ss_dssp SC------THHHHHHHHHEE-EEEEEEECCC
T ss_pred CC------HHHHHHHHHHHh-cCCEEEEEeC
Confidence 43 257889999999 9999987554
No 354
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.46 E-value=0.044 Score=46.34 Aligned_cols=99 Identities=14% Similarity=0.101 Sum_probs=63.2
Q ss_pred CCCCeEEEEcC--CcchhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 32 TNHELAWDVGT--GSGQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 32 ~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
.++++||-.|+ |.|.....+++ .+++|+++|.++..++.+++..........-......+.+. .....+|+++.+.
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~D~vi~~~ 217 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEI-TGGKKVRVVYDSV 217 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHH-TTTCCEEEEEECS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHH-hCCCCceEEEECC
Confidence 46788999994 34666666554 57799999999988888775322122221111001112222 1234699998764
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
. ...++.+.+.|+ ++|+++....
T Consensus 218 g------~~~~~~~~~~l~-~~G~iv~~g~ 240 (327)
T 1qor_A 218 G------RDTWERSLDCLQ-RRGLMVSFGN 240 (327)
T ss_dssp C------GGGHHHHHHTEE-EEEEEEECCC
T ss_pred c------hHHHHHHHHHhc-CCCEEEEEec
Confidence 3 467889999999 9999987654
No 355
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.41 E-value=0.01 Score=51.20 Aligned_cols=97 Identities=20% Similarity=0.153 Sum_probs=64.1
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchh-hh-hhccCCCCceeEEEe
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIA-EL-EQNVAAQSTVDLVTI 106 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~-~~~~~~~~~~Dlv~~ 106 (265)
..++++||-+|+|. |.++..+++ .+++|+++|.++..++.++++.........- . ++ +.+ . +.+|+|+.
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~----~~~~~~~~--~-~~~D~vid 249 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLE----EGDWGEKY--F-DTFDLIVV 249 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGG----TSCHHHHS--C-SCEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcC----chHHHHHh--h-cCCCEEEE
Confidence 35678999999975 777777776 4678999999999888887643222222110 1 11 222 1 47999996
Q ss_pred ccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
...-- ....++.+.++|+ ++|+++....
T Consensus 250 ~~g~~---~~~~~~~~~~~l~-~~G~iv~~g~ 277 (360)
T 1piw_A 250 CASSL---TDIDFNIMPKAMK-VGGRIVSISI 277 (360)
T ss_dssp CCSCS---TTCCTTTGGGGEE-EEEEEEECCC
T ss_pred CCCCC---cHHHHHHHHHHhc-CCCEEEEecC
Confidence 54320 0245667788999 9999987544
No 356
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.29 E-value=0.024 Score=48.80 Aligned_cols=94 Identities=18% Similarity=0.129 Sum_probs=62.5
Q ss_pred CCCeEEEEcCCc-chhHHHHHh-cCCcEEEEcCCHHHHHHHH-cCCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 33 NHELAWDVGTGS-GQAAASLSG-IFENVIGTETSPKQIEFAT-KLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
++++||-+|+|. |.++..+++ .+++|+++|.+++.++.++ ++.........- ...+... .+.+|+|+-...
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~---~~~~~~~---~~g~D~vid~~g 253 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSD---QAKMSEL---ADSLDYVIDTVP 253 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTC---HHHHHHS---TTTEEEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeecccc---HHHHHHh---cCCCCEEEECCC
Confidence 778999999875 777777776 4678999999998888877 443222222111 0122222 136999986532
Q ss_pred cccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 110 MHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 110 ~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
....++.+.++|+ ++|+++....
T Consensus 254 -----~~~~~~~~~~~l~-~~G~iv~~G~ 276 (357)
T 2cf5_A 254 -----VHHALEPYLSLLK-LDGKLILMGV 276 (357)
T ss_dssp -----SCCCSHHHHTTEE-EEEEEEECSC
T ss_pred -----ChHHHHHHHHHhc-cCCEEEEeCC
Confidence 1235677889999 9999987554
No 357
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.23 E-value=0.015 Score=48.97 Aligned_cols=87 Identities=20% Similarity=-0.004 Sum_probs=59.6
Q ss_pred CCCCeEEEEcCCc-chhHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 32 TNHELAWDVGTGS-GQAAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 32 ~~~~~vlDvGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
.++++||-+|+|. |.++..+++. +++|++++ ++..++.++++. ..... + |.+.+ .+.+|+|+-...
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lG-a~~v~-~------d~~~v---~~g~Dvv~d~~g 208 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRG-VRHLY-R------EPSQV---TQKYFAIFDAVN 208 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHT-EEEEE-S------SGGGC---CSCEEEEECC--
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcC-CCEEE-c------CHHHh---CCCccEEEECCC
Confidence 5678999999975 8888888764 67999999 998888888743 22222 1 12333 567999986432
Q ss_pred cccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 110 MHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 110 ~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
- ..+..+.+.|+ ++|+++...
T Consensus 209 ~------~~~~~~~~~l~-~~G~~v~~g 229 (315)
T 3goh_A 209 S------QNAAALVPSLK-ANGHIICIQ 229 (315)
T ss_dssp -----------TTGGGEE-EEEEEEEEC
T ss_pred c------hhHHHHHHHhc-CCCEEEEEe
Confidence 1 22366789999 999998764
No 358
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=95.19 E-value=0.066 Score=45.89 Aligned_cols=99 Identities=15% Similarity=0.041 Sum_probs=62.7
Q ss_pred CCCCeEEEEcC--CcchhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 32 TNHELAWDVGT--GSGQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 32 ~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
.++++||-.|+ |.|..+..+++ .+++|+++|.+++.++.++++................+.+. .....+|+++.+.
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~d~vi~~~ 239 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKF-TKGAGVNLILDCI 239 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHH-TTTSCEEEEEESS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHH-hcCCCceEEEECC
Confidence 56788999984 34666666654 56799999999998888865422222221111011122222 1334699998764
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.- ..+..+.++|+ ++|++++...
T Consensus 240 G~------~~~~~~~~~l~-~~G~iv~~G~ 262 (354)
T 2j8z_A 240 GG------SYWEKNVNCLA-LDGRWVLYGL 262 (354)
T ss_dssp CG------GGHHHHHHHEE-EEEEEEECCC
T ss_pred Cc------hHHHHHHHhcc-CCCEEEEEec
Confidence 31 35778899999 9999987654
No 359
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=95.03 E-value=0.18 Score=43.49 Aligned_cols=97 Identities=7% Similarity=-0.038 Sum_probs=64.5
Q ss_pred CCCCeEEEEcC-C-cchhHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 32 TNHELAWDVGT-G-SGQAAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 32 ~~~~~vlDvGc-G-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
.++++||-+|+ | .|.++..+++. +++|+++. ++.-++.++++.....+..........+.++ .++.+|+|+-.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~--t~g~~d~v~d~- 238 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTY--TKNNLRYALDC- 238 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHH--TTTCCCEEEES-
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHH--ccCCccEEEEC-
Confidence 56788999999 3 58888888875 56888885 8888888887643333332221111222222 22359999965
Q ss_pred ccccCChhHHHHHHHHHh-cCCCcEEEEEe
Q 024647 109 AMHWFDLPQFYNQVKWVL-KKPNGVIATWC 137 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~L-k~pgG~l~~~~ 137 (265)
..-...++.+.+.| + ++|+++...
T Consensus 239 ----~g~~~~~~~~~~~l~~-~~G~iv~~g 263 (371)
T 3gqv_A 239 ----ITNVESTTFCFAAIGR-AGGHYVSLN 263 (371)
T ss_dssp ----SCSHHHHHHHHHHSCT-TCEEEEESS
T ss_pred ----CCchHHHHHHHHHhhc-CCCEEEEEe
Confidence 23346788889999 7 899998754
No 360
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=94.91 E-value=0.094 Score=46.63 Aligned_cols=100 Identities=15% Similarity=0.132 Sum_probs=65.7
Q ss_pred CCCCCeEEEEcC-Cc-chhHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccc-----------------hhh
Q 024647 31 TTNHELAWDVGT-GS-GQAAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSPAMS-----------------IAE 90 (265)
Q Consensus 31 ~~~~~~vlDvGc-G~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-----------------~~d 90 (265)
..++++||-+|+ |. |.++..+++. ++++++++.++.-++.++++.....+....... ...
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence 356789999998 54 8888888764 678999999999999888643222222111000 011
Q ss_pred hhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 91 LEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 91 ~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+.++ .....+|+|+-... ...+..+.++|+ ++|++++...
T Consensus 306 i~~~-t~g~g~Dvvid~~G------~~~~~~~~~~l~-~~G~iv~~G~ 345 (456)
T 3krt_A 306 IREL-TGGEDIDIVFEHPG------RETFGASVFVTR-KGGTITTCAS 345 (456)
T ss_dssp HHHH-HTSCCEEEEEECSC------HHHHHHHHHHEE-EEEEEEESCC
T ss_pred HHHH-hCCCCCcEEEEcCC------chhHHHHHHHhh-CCcEEEEEec
Confidence 1122 13357999986532 257889999999 9999987543
No 361
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.91 E-value=0.098 Score=44.61 Aligned_cols=96 Identities=15% Similarity=0.070 Sum_probs=63.9
Q ss_pred CCCCeEEEEcC-C-cchhHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 32 TNHELAWDVGT-G-SGQAAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 32 ~~~~~vlDvGc-G-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
.++++||-+|+ | .|..+..+++. +++|+++ .++..++.++++. ...+. ........+... .....+|+|+-..
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lG-a~~i~-~~~~~~~~~~~~-~~~~g~D~vid~~ 224 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLG-ATPID-ASREPEDYAAEH-TAGQGFDLVYDTL 224 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHT-SEEEE-TTSCHHHHHHHH-HTTSCEEEEEESS
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcC-CCEec-cCCCHHHHHHHH-hcCCCceEEEECC
Confidence 56789999994 4 38888887764 6799999 8888888887642 22232 221111222222 2345799998753
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
. ...+..+.+.|+ ++|.++....
T Consensus 225 g------~~~~~~~~~~l~-~~G~iv~~g~ 247 (343)
T 3gaz_A 225 G------GPVLDASFSAVK-RFGHVVSCLG 247 (343)
T ss_dssp C------THHHHHHHHHEE-EEEEEEESCC
T ss_pred C------cHHHHHHHHHHh-cCCeEEEEcc
Confidence 3 257889999999 9999987543
No 362
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.88 E-value=0.047 Score=47.07 Aligned_cols=94 Identities=17% Similarity=0.103 Sum_probs=62.0
Q ss_pred CCCeEEEEcCCc-chhHHHHHhc-CCcEEEEcCCHHHHHHHH-cCCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 33 NHELAWDVGTGS-GQAAASLSGI-FENVIGTETSPKQIEFAT-KLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
++++||-+|+|. |..+..+++. +++|++++.++..++.++ ++.........- ...+.... +.+|+|+....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~---~~~~~~~~---~~~D~vid~~g 260 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRD---QEQMQAAA---GTLDGIIDTVS 260 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTC---HHHHHHTT---TCEEEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccC---HHHHHHhh---CCCCEEEECCC
Confidence 678899999875 7777777764 578999999999888776 443222222111 01233331 36999986532
Q ss_pred cccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 110 MHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 110 ~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
. ...++.+.+.|+ ++|+++....
T Consensus 261 ~-----~~~~~~~~~~l~-~~G~iv~~g~ 283 (366)
T 1yqd_A 261 A-----VHPLLPLFGLLK-SHGKLILVGA 283 (366)
T ss_dssp S-----CCCSHHHHHHEE-EEEEEEECCC
T ss_pred c-----HHHHHHHHHHHh-cCCEEEEEcc
Confidence 1 234567788999 9999987554
No 363
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.81 E-value=0.077 Score=44.98 Aligned_cols=99 Identities=18% Similarity=0.124 Sum_probs=62.8
Q ss_pred CCCCeEEEEcC--CcchhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 32 TNHELAWDVGT--GSGQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 32 ~~~~~vlDvGc--G~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
.++++||-.|+ |.|..+..+++ .+++|+++|.+++.++.++++................+.+.. ....+|+++.+.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~-~~~~~d~vi~~~ 222 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREIT-GGKGVDVVYDSI 222 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH-TTCCEEEEEECS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHh-CCCCCeEEEECC
Confidence 56788999995 45776666654 567999999999888877653221222211110011122221 234699999754
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.- ..++.+.+.|+ ++|+++....
T Consensus 223 g~------~~~~~~~~~l~-~~G~iv~~g~ 245 (333)
T 1wly_A 223 GK------DTLQKSLDCLR-PRGMCAAYGH 245 (333)
T ss_dssp CT------TTHHHHHHTEE-EEEEEEECCC
T ss_pred cH------HHHHHHHHhhc-cCCEEEEEec
Confidence 31 56888999999 9999987654
No 364
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.79 E-value=0.037 Score=48.66 Aligned_cols=42 Identities=21% Similarity=0.188 Sum_probs=35.8
Q ss_pred CCCCeEEEEcCCcchhHHHHH-hcC---CcEEEEcCCHHHHHHHHc
Q 024647 32 TNHELAWDVGTGSGQAAASLS-GIF---ENVIGTETSPKQIEFATK 73 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~-~~~---~~v~~vD~s~~~~~~a~~ 73 (265)
+++.+++||||+.|..+..++ +.+ .+|+++|++|...+..++
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~ 270 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQN 270 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHH
Confidence 467899999999999999987 444 479999999999887764
No 365
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.75 E-value=0.071 Score=44.97 Aligned_cols=90 Identities=13% Similarity=0.039 Sum_probs=61.9
Q ss_pred eEEEEcC-C-cchhHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhc-cCCCCceeEEEeccccc
Q 024647 36 LAWDVGT-G-SGQAAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQN-VAAQSTVDLVTIAQAMH 111 (265)
Q Consensus 36 ~vlDvGc-G-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~Dlv~~~~~~~ 111 (265)
.||-.|+ | .|.++..+++. +++|++++.+++.++.++++..-..... .+.... ....+.+|+|+-...
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~------~~~~~~~~~~~~~~d~v~d~~g-- 220 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSR------DEFAESRPLEKQLWAGAIDTVG-- 220 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEG------GGSSCCCSSCCCCEEEEEESSC--
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEec------CCHHHHHhhcCCCccEEEECCC--
Confidence 4999997 4 48888888864 6799999999999998887532222221 111111 123457999886432
Q ss_pred cCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 112 WFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 112 ~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
...++.+.+.|+ ++|+++....
T Consensus 221 ----~~~~~~~~~~l~-~~G~iv~~G~ 242 (324)
T 3nx4_A 221 ----DKVLAKVLAQMN-YGGCVAACGL 242 (324)
T ss_dssp ----HHHHHHHHHTEE-EEEEEEECCC
T ss_pred ----cHHHHHHHHHHh-cCCEEEEEec
Confidence 238899999999 9999987654
No 366
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.66 E-value=0.087 Score=44.82 Aligned_cols=68 Identities=13% Similarity=-0.026 Sum_probs=48.7
Q ss_pred CCeEEEEcCCcchhHHHHHhcCCc-EEEEcCCHHHHHHHHcC-CCceEEecCCccchhhhhhccC-CCCceeEEEecccc
Q 024647 34 HELAWDVGTGSGQAAASLSGIFEN-VIGTETSPKQIEFATKL-PNIRYELTSPAMSIAELEQNVA-AQSTVDLVTIAQAM 110 (265)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~~~~~~-v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~~~~-~~~~~Dlv~~~~~~ 110 (265)
..+++|+.||.|.++..+.+.+.+ +.++|+++..++..+.. ++.. . +|+.++.. .-..+|+|+....+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~--~-------~Di~~~~~~~~~~~D~l~~gpPC 81 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKP--E-------GDITQVNEKTIPDHDILCAGFPC 81 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCC--B-------SCGGGSCGGGSCCCSEEEEECCC
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCC--c-------CCHHHcCHhhCCCCCEEEECCCC
Confidence 368999999999999999998875 78999999998877642 3222 2 44444321 11258999987644
No 367
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=94.63 E-value=0.17 Score=43.30 Aligned_cols=99 Identities=14% Similarity=0.033 Sum_probs=63.2
Q ss_pred CCCC--CeEEEEcC--CcchhHHHHHh-cCC-cEEEEcCCHHHHHHHHc-CCCceEEecCCccchhhhhhccCCCCceeE
Q 024647 31 TTNH--ELAWDVGT--GSGQAAASLSG-IFE-NVIGTETSPKQIEFATK-LPNIRYELTSPAMSIAELEQNVAAQSTVDL 103 (265)
Q Consensus 31 ~~~~--~~vlDvGc--G~G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dl 103 (265)
..++ ++||-.|+ |.|..+..+++ .++ +|+++|.++..++.+++ +.........-......+... .. +.+|+
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~-~~-~~~d~ 233 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRES-CP-AGVDV 233 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHH-CT-TCEEE
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHh-cC-CCCCE
Confidence 3567 89999998 34666666655 567 89999999988887765 422222221111011112222 12 27999
Q ss_pred EEeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 104 VTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 104 v~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
++.+.. ...++.+.++|+ ++|++++...
T Consensus 234 vi~~~G------~~~~~~~~~~l~-~~G~iv~~G~ 261 (357)
T 2zb4_A 234 YFDNVG------GNISDTVISQMN-ENSHIILCGQ 261 (357)
T ss_dssp EEESCC------HHHHHHHHHTEE-EEEEEEECCC
T ss_pred EEECCC------HHHHHHHHHHhc-cCcEEEEECC
Confidence 997644 267889999999 9999987543
No 368
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.28 E-value=0.041 Score=46.29 Aligned_cols=41 Identities=12% Similarity=0.101 Sum_probs=29.2
Q ss_pred CCCceeEEEeccccccCCh----hHHHHHHHHHhcCCCcEEEEEec
Q 024647 97 AQSTVDLVTIAQAMHWFDL----PQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 97 ~~~~~Dlv~~~~~~~~~~~----~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
++..+|+|+...--.-.+| +.+++.++++++ |||+|+.++-
T Consensus 183 ~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~-pgg~laTYta 227 (308)
T 3vyw_A 183 ENFKADAVFHDAFSPYKNPELWTLDFLSLIKERID-EKGYWVSYSS 227 (308)
T ss_dssp CSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEE-EEEEEEESCC
T ss_pred cccceeEEEeCCCCcccCcccCCHHHHHHHHHHhC-CCcEEEEEeC
Confidence 4457999997542221233 479999999999 9999986544
No 369
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.11 E-value=0.45 Score=34.68 Aligned_cols=95 Identities=15% Similarity=0.055 Sum_probs=59.6
Q ss_pred CCeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccccc
Q 024647 34 HELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMH 111 (265)
Q Consensus 34 ~~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~ 111 (265)
.++|+=+|||. | .++..|.+.+.+|+++|.+++.++.++. .++....+++... ..++.. .-..+|+|++...
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~-~~l~~a--~i~~ad~vi~~~~-- 80 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-RGVRAVLGNAANE-EIMQLA--HLECAKWLILTIP-- 80 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEESCTTSH-HHHHHT--TGGGCSEEEECCS--
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-cCCCEEECCCCCH-HHHHhc--CcccCCEEEEECC--
Confidence 36799999986 4 3344455667899999999999998876 4677777554211 112222 2346898887532
Q ss_pred cCChh--HHHHHHHHHhcCCCcEEEEEe
Q 024647 112 WFDLP--QFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 112 ~~~~~--~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
+.. ..+-...+.+. |+..++.-.
T Consensus 81 --~~~~n~~~~~~a~~~~-~~~~iiar~ 105 (140)
T 3fwz_A 81 --NGYEAGEIVASARAKN-PDIEIIARA 105 (140)
T ss_dssp --CHHHHHHHHHHHHHHC-SSSEEEEEE
T ss_pred --ChHHHHHHHHHHHHHC-CCCeEEEEE
Confidence 222 23344567777 788766544
No 370
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=94.09 E-value=0.12 Score=44.50 Aligned_cols=96 Identities=14% Similarity=0.027 Sum_probs=60.5
Q ss_pred CCCCCeEEEEc-CCc-chhHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhh-hhccCCCCceeEEEe
Q 024647 31 TTNHELAWDVG-TGS-GQAAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAEL-EQNVAAQSTVDLVTI 106 (265)
Q Consensus 31 ~~~~~~vlDvG-cG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~Dlv~~ 106 (265)
..++++||-.| +|. |..+..+++. +++|++++ ++.-++.++++.........- .++ +.+. ....+|+|+.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~----~~~~~~~~-~~~g~D~vid 254 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKS----GSVEEQLK-SLKPFDFILD 254 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTS----SCHHHHHH-TSCCBSEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCc----hHHHHHHh-hcCCCCEEEE
Confidence 34678999999 564 8888887764 57899998 677778777653222222111 111 1121 1246999986
Q ss_pred ccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
... .....+..+.+.|+ ++|+++...
T Consensus 255 ~~g----~~~~~~~~~~~~l~-~~G~iv~~g 280 (375)
T 2vn8_A 255 NVG----GSTETWAPDFLKKW-SGATYVTLV 280 (375)
T ss_dssp SSC----TTHHHHGGGGBCSS-SCCEEEESC
T ss_pred CCC----ChhhhhHHHHHhhc-CCcEEEEeC
Confidence 532 22245677788899 999998754
No 371
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.07 E-value=0.094 Score=45.12 Aligned_cols=93 Identities=18% Similarity=0.123 Sum_probs=60.5
Q ss_pred CCeEEEEcCCc-chhHHHHHh-cCCcEEEEcCCH---HHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 34 HELAWDVGTGS-GQAAASLSG-IFENVIGTETSP---KQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 34 ~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~---~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
+++||-+|+|. |..+..+++ .+++|+++|.++ +.++.++++. ....... .+. ..+.+. . +.+|+|+...
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~g-a~~v~~~-~~~-~~~~~~--~-~~~d~vid~~ 254 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETK-TNYYNSS-NGY-DKLKDS--V-GKFDVIIDAT 254 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHT-CEEEECT-TCS-HHHHHH--H-CCEEEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhC-CceechH-HHH-HHHHHh--C-CCCCEEEECC
Confidence 78999999954 666666655 467999999998 7777776532 2222111 111 222221 2 5699998764
Q ss_pred ccccCChhHHH-HHHHHHhcCCCcEEEEEec
Q 024647 109 AMHWFDLPQFY-NQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 109 ~~~~~~~~~~l-~~~~~~Lk~pgG~l~~~~~ 138 (265)
. ....+ +.+.+.|+ ++|+++....
T Consensus 255 g-----~~~~~~~~~~~~l~-~~G~iv~~g~ 279 (366)
T 2cdc_A 255 G-----ADVNILGNVIPLLG-RNGVLGLFGF 279 (366)
T ss_dssp C-----CCTHHHHHHGGGEE-EEEEEEECSC
T ss_pred C-----ChHHHHHHHHHHHh-cCCEEEEEec
Confidence 3 23466 88999999 9999987654
No 372
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=93.95 E-value=0.2 Score=44.33 Aligned_cols=99 Identities=11% Similarity=0.017 Sum_probs=64.3
Q ss_pred CCCCCeEEEEcC-Cc-chhHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCC-cc-----------------chh
Q 024647 31 TTNHELAWDVGT-GS-GQAAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSP-AM-----------------SIA 89 (265)
Q Consensus 31 ~~~~~~vlDvGc-G~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~-~~-----------------~~~ 89 (265)
..++++||-.|+ |. |..+..+++. ++++++++.++.-++.++++.........- .+ ...
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAK 297 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHH
Confidence 356789999998 43 7777777764 678999999999999888753222222100 00 001
Q ss_pred hhhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 90 ELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 90 d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.+.... ...+|+|+.+.. ...++.+.+.|+ ++|+++....
T Consensus 298 ~v~~~~--g~g~Dvvid~~G------~~~~~~~~~~l~-~~G~iv~~G~ 337 (447)
T 4a0s_A 298 LVVEKA--GREPDIVFEHTG------RVTFGLSVIVAR-RGGTVVTCGS 337 (447)
T ss_dssp HHHHHH--SSCCSEEEECSC------HHHHHHHHHHSC-TTCEEEESCC
T ss_pred HHHHHh--CCCceEEEECCC------chHHHHHHHHHh-cCCEEEEEec
Confidence 111121 346999987533 246788899999 9999987553
No 373
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=93.93 E-value=0.12 Score=44.07 Aligned_cols=96 Identities=9% Similarity=-0.066 Sum_probs=57.7
Q ss_pred CeEEEE-cCCc-chhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccccc
Q 024647 35 ELAWDV-GTGS-GQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMH 111 (265)
Q Consensus 35 ~~vlDv-GcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~ 111 (265)
.+||-. |+|. |..+..+++ .+++|+++|.++.-++.++++................+.+.. ....+|+|+-...
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~-~~~g~D~vid~~g-- 242 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVM-KAEQPRIFLDAVT-- 242 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHH-HHHCCCEEEESSC--
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHh-cCCCCcEEEECCC--
Confidence 455543 5553 666666665 467999999999988888764322233322111111122111 1236999986533
Q ss_pred cCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 112 WFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 112 ~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
...+..+.+.|+ ++|+++....
T Consensus 243 ----~~~~~~~~~~l~-~~G~iv~~G~ 264 (349)
T 3pi7_A 243 ----GPLASAIFNAMP-KRARWIIYGR 264 (349)
T ss_dssp ----HHHHHHHHHHSC-TTCEEEECCC
T ss_pred ----ChhHHHHHhhhc-CCCEEEEEec
Confidence 234578889999 9999988653
No 374
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=93.89 E-value=0.069 Score=45.58 Aligned_cols=89 Identities=10% Similarity=0.042 Sum_probs=58.1
Q ss_pred CeEEEEcCCcchhHHHHHhcCC--c-EEEEcCCHHHHHHHHc-CCCceEEecCCccchhhhhhccCCCCceeEEEecccc
Q 024647 35 ELAWDVGTGSGQAAASLSGIFE--N-VIGTETSPKQIEFATK-LPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAM 110 (265)
Q Consensus 35 ~~vlDvGcG~G~~~~~l~~~~~--~-v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~ 110 (265)
.+++|+-||.|.++..+.+.+. + |.++|+++..++.-+. .++......++.-. +.+++ +...+|+++.....
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~--~~~~~--~~~~~D~l~ggpPC 79 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQL--TPQVI--KKWNVDTILMSPPC 79 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGC--CHHHH--HHTTCCEEEECCCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccC--CHHHh--ccCCCCEEEecCCC
Confidence 4799999999999999998874 3 7899999999886654 45555555443211 11112 22368999986643
Q ss_pred ccC----------Ch-hHHHHHHHHHhc
Q 024647 111 HWF----------DL-PQFYNQVKWVLK 127 (265)
Q Consensus 111 ~~~----------~~-~~~l~~~~~~Lk 127 (265)
.-+ |. ..++.++.++++
T Consensus 80 Q~fS~ag~~~~~~d~r~~L~~~~~r~i~ 107 (333)
T 4h0n_A 80 QPFTRNGKYLDDNDPRTNSFLYLIGILD 107 (333)
T ss_dssp CCSEETTEECCTTCTTSCCHHHHHHHGG
T ss_pred cchhhhhhccCCcCcccccHHHHHHHHH
Confidence 322 21 235666777765
No 375
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=93.80 E-value=0.059 Score=45.03 Aligned_cols=93 Identities=15% Similarity=0.084 Sum_probs=62.0
Q ss_pred CCCCCeEEEEcC-C-cchhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccch-hhhhhccCCCCceeEEEe
Q 024647 31 TTNHELAWDVGT-G-SGQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSI-AELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 31 ~~~~~~vlDvGc-G-~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~Dlv~~ 106 (265)
..++++||-+|+ | .|..+..+++ .+++|+++|.++..++.++++......... . .++.+. . +.+|+|+.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~----~~~~~~~~-~--~~~d~vid 195 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYA----EVPERAKA-W--GGLDLVLE 195 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGG----GHHHHHHH-T--TSEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECC----cchhHHHH-h--cCceEEEE
Confidence 457789999998 3 4777777775 467999999999988888764322222210 0 122111 1 56999987
Q ss_pred ccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
..- ..++.+.+.|+ ++|+++....
T Consensus 196 -~g~------~~~~~~~~~l~-~~G~~v~~g~ 219 (302)
T 1iz0_A 196 -VRG------KEVEESLGLLA-HGGRLVYIGA 219 (302)
T ss_dssp -CSC------TTHHHHHTTEE-EEEEEEEC--
T ss_pred -CCH------HHHHHHHHhhc-cCCEEEEEeC
Confidence 431 46788899999 9999987543
No 376
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=93.73 E-value=0.17 Score=42.57 Aligned_cols=92 Identities=21% Similarity=0.086 Sum_probs=59.8
Q ss_pred CCCCCeEEEEc-CCc-chhHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhh-hhhccCCCCceeEEEe
Q 024647 31 TTNHELAWDVG-TGS-GQAAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAE-LEQNVAAQSTVDLVTI 106 (265)
Q Consensus 31 ~~~~~~vlDvG-cG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~Dlv~~ 106 (265)
..++++||-+| +|. |.++..+++. +++|++++ ++.-++.++++.........- .+ +.+. -..+|+|+-
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~----~~~~~~~---~~g~D~v~d 221 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAEQCINYHE----EDFLLAI---STPVDAVID 221 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCSEEEETTT----SCHHHHC---CSCEEEEEE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCCEEEeCCC----cchhhhh---ccCCCEEEE
Confidence 35778999996 665 8888888864 67899887 455577777643222333211 11 2221 146999986
Q ss_pred ccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
... .. .+..+.+.|+ ++|+++...
T Consensus 222 ~~g-----~~-~~~~~~~~l~-~~G~iv~~g 245 (321)
T 3tqh_A 222 LVG-----GD-VGIQSIDCLK-ETGCIVSVP 245 (321)
T ss_dssp SSC-----HH-HHHHHGGGEE-EEEEEEECC
T ss_pred CCC-----cH-HHHHHHHhcc-CCCEEEEeC
Confidence 532 23 3488999999 999998753
No 377
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.38 E-value=0.21 Score=37.15 Aligned_cols=99 Identities=12% Similarity=-0.012 Sum_probs=53.9
Q ss_pred CCCCeEEEEcCCc-chh-HHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhcc-CCCCceeEEEecc
Q 024647 32 TNHELAWDVGTGS-GQA-AASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNV-AAQSTVDLVTIAQ 108 (265)
Q Consensus 32 ~~~~~vlDvGcG~-G~~-~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~Dlv~~~~ 108 (265)
.+.++|+-+|||. |.. +..|.+.+.+|+++|.++..++.++...+......+. .+.+.+. ..-..+|+|+...
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~----~~~~~l~~~~~~~ad~Vi~~~ 92 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDA----AEFETLKECGMEKADMVFAFT 92 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCT----TSHHHHHTTTGGGCSEEEECS
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecC----CCHHHHHHcCcccCCEEEEEe
Confidence 4567899999975 433 3344556778999999998776665223455555443 1111121 1124689998763
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
.-. .....+..+.+.+. |...++...
T Consensus 93 ~~~--~~~~~~~~~~~~~~-~~~~iv~~~ 118 (155)
T 2g1u_A 93 NDD--STNFFISMNARYMF-NVENVIARV 118 (155)
T ss_dssp SCH--HHHHHHHHHHHHTS-CCSEEEEEC
T ss_pred CCc--HHHHHHHHHHHHHC-CCCeEEEEE
Confidence 211 11123334444445 455555433
No 378
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=93.34 E-value=0.2 Score=42.22 Aligned_cols=97 Identities=11% Similarity=0.033 Sum_probs=61.2
Q ss_pred CCCC-eEEEEcC-C-cchhHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEec
Q 024647 32 TNHE-LAWDVGT-G-SGQAAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 32 ~~~~-~vlDvGc-G-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~ 107 (265)
.++. +||-+|+ | .|..+..+++. +++|++++.+++-++.++++.........- ........+ ..+.+|+|+-.
T Consensus 147 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~~~~~--~~~~~d~vid~ 223 (328)
T 1xa0_A 147 TPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLARED-VMAERIRPL--DKQRWAAAVDP 223 (328)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC----------C--CSCCEEEEEEC
T ss_pred CCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCC-cHHHHHHHh--cCCcccEEEEC
Confidence 4443 7999998 4 48888887764 678999999988888887653222222110 000011112 23469999865
Q ss_pred cccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 108 QAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 108 ~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.. . ..+..+.+.|+ ++|++++...
T Consensus 224 ~g----~--~~~~~~~~~l~-~~G~~v~~G~ 247 (328)
T 1xa0_A 224 VG----G--RTLATVLSRMR-YGGAVAVSGL 247 (328)
T ss_dssp ST----T--TTHHHHHHTEE-EEEEEEECSC
T ss_pred Cc----H--HHHHHHHHhhc-cCCEEEEEee
Confidence 32 1 36788899999 9999987544
No 379
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=93.23 E-value=0.31 Score=41.08 Aligned_cols=94 Identities=10% Similarity=0.040 Sum_probs=61.7
Q ss_pred CCCC-eEEEEcC-C-cchhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhh--hhc-cCCCCceeEE
Q 024647 32 TNHE-LAWDVGT-G-SGQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAEL--EQN-VAAQSTVDLV 104 (265)
Q Consensus 32 ~~~~-~vlDvGc-G-~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~--~~~-~~~~~~~Dlv 104 (265)
.+++ +||-.|| | .|..+..+++ .+++|++++.+++-++.++++........ .+. +.. ....+.+|+|
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~------~~~~~~~~~~~~~~~~d~v 221 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISR------EDVYDGTLKALSKQQWQGA 221 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEH------HHHCSSCCCSSCCCCEEEE
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEEC------CCchHHHHHHhhcCCccEE
Confidence 4443 7999998 4 4777777776 46789999999888888776432222221 111 111 1123469999
Q ss_pred EeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 105 TIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+.... . ..+..+.+.|+ ++|++++...
T Consensus 222 id~~g-----~-~~~~~~~~~l~-~~G~iv~~G~ 248 (330)
T 1tt7_A 222 VDPVG-----G-KQLASLLSKIQ-YGGSVAVSGL 248 (330)
T ss_dssp EESCC-----T-HHHHHHHTTEE-EEEEEEECCC
T ss_pred EECCc-----H-HHHHHHHHhhc-CCCEEEEEec
Confidence 86532 1 47889999999 9999987654
No 380
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=93.03 E-value=0.18 Score=42.55 Aligned_cols=69 Identities=6% Similarity=-0.069 Sum_probs=48.8
Q ss_pred CeEEEEcCCcchhHHHHHhcCCc-EEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccC-CCCceeEEEecccc
Q 024647 35 ELAWDVGTGSGQAAASLSGIFEN-VIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVA-AQSTVDLVTIAQAM 110 (265)
Q Consensus 35 ~~vlDvGcG~G~~~~~l~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~Dlv~~~~~~ 110 (265)
++|||+=||.|.++..+.+.+.+ +.++|+++..++.-+..-...... +|+.++.. .-..+|+++....+
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~~~~~-------~DI~~i~~~~~~~~D~l~ggpPC 71 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSAKLIK-------GDISKISSDEFPKCDGIIGGPPS 71 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCSEEEE-------SCGGGCCGGGSCCCSEEECCCCG
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCCCccc-------CChhhCCHhhCCcccEEEecCCC
Confidence 46999999999999999988776 679999999988765422234555 44444321 11358999987644
No 381
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=92.96 E-value=0.17 Score=42.36 Aligned_cols=74 Identities=11% Similarity=-0.022 Sum_probs=50.6
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCc---EEEEcCCHHHHHHHHc-CCCceEEecCCccchhhhhhccCCCCceeEEEec
Q 024647 32 TNHELAWDVGTGSGQAAASLSGIFEN---VIGTETSPKQIEFATK-LPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 32 ~~~~~vlDvGcG~G~~~~~l~~~~~~---v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~ 107 (265)
....+++|+-||.|.++..+.+.+.+ |.++|+++..++..+. .++......++.-+.. ++++ ..+.+|+++..
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~--~~i~-~~~~~Dll~gg 90 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQ--KHIQ-EWGPFDLVIGG 90 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCH--HHHH-HTCCCSEEEEC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccH--HHhc-ccCCcCEEEec
Confidence 34568999999999999999988765 4899999998886543 4555566644421111 1121 11469999987
Q ss_pred c
Q 024647 108 Q 108 (265)
Q Consensus 108 ~ 108 (265)
.
T Consensus 91 p 91 (295)
T 2qrv_A 91 S 91 (295)
T ss_dssp C
T ss_pred C
Confidence 6
No 382
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=92.91 E-value=0.38 Score=41.16 Aligned_cols=98 Identities=14% Similarity=0.109 Sum_probs=62.3
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHh-c-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEec
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSG-I-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~ 107 (265)
..++++||-+|+|. |.++..+++ . +++|+++|.+++-++.++++.........-. ....+..+. ....+|+|+-.
T Consensus 184 ~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-~~~~v~~~~-~g~g~Dvvid~ 261 (359)
T 1h2b_A 184 LYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD-PVKQVMELT-RGRGVNVAMDF 261 (359)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSC-HHHHHHHHT-TTCCEEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccch-HHHHHHHHh-CCCCCcEEEEC
Confidence 45778999999975 677777776 4 6789999999999998887543333332211 112233332 23379999965
Q ss_pred cccccCChhH--HHHHHHHHhcCCCcEEEEEec
Q 024647 108 QAMHWFDLPQ--FYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 108 ~~~~~~~~~~--~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
-. ... .+..+.++ + +|+++....
T Consensus 262 ~G-----~~~~~~~~~~~~~-~--~G~~v~~g~ 286 (359)
T 1h2b_A 262 VG-----SQATVDYTPYLLG-R--MGRLIIVGY 286 (359)
T ss_dssp SC-----CHHHHHHGGGGEE-E--EEEEEECCC
T ss_pred CC-----CchHHHHHHHhhc-C--CCEEEEEeC
Confidence 32 233 56666665 4 898887554
No 383
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=92.86 E-value=0.063 Score=45.72 Aligned_cols=87 Identities=10% Similarity=0.040 Sum_probs=57.0
Q ss_pred CCCeEEEEcCCcchhHHHHHhcC--Cc-E-EEEcCCHHHHHHHHc-CCCceEEecCCccchhhhhhcc---CCCCceeEE
Q 024647 33 NHELAWDVGTGSGQAAASLSGIF--EN-V-IGTETSPKQIEFATK-LPNIRYELTSPAMSIAELEQNV---AAQSTVDLV 104 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~--~~-v-~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~~---~~~~~~Dlv 104 (265)
...+++|+-||.|.++..+.+.+ .+ + .++|+++..++..+. .++. ... +|+.++. ++...+|++
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~-------~DI~~~~~~~i~~~~~Dil 80 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQV-------KNLDSISIKQIESLNCNTW 80 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBC-------CCTTTCCHHHHHHTCCCEE
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-ccc-------CChhhcCHHHhccCCCCEE
Confidence 44689999999999999999887 34 5 699999999886654 2332 233 3333321 122368999
Q ss_pred EeccccccC------------Chh-HHHHHHHH-Hhc
Q 024647 105 TIAQAMHWF------------DLP-QFYNQVKW-VLK 127 (265)
Q Consensus 105 ~~~~~~~~~------------~~~-~~l~~~~~-~Lk 127 (265)
+....+.-+ |.. .++.++.+ +++
T Consensus 81 ~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~ 117 (327)
T 3qv2_A 81 FMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILP 117 (327)
T ss_dssp EECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGG
T ss_pred EecCCccCcccccCCCCCCCccccchhHHHHHHHHHH
Confidence 987643322 222 46777777 654
No 384
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=92.76 E-value=0.13 Score=38.51 Aligned_cols=109 Identities=14% Similarity=0.107 Sum_probs=62.9
Q ss_pred HHHHHHhhC-CCCCeEEEEcCCcchhHHHHHhcCC--cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCC
Q 024647 23 LFKFITSKT-TNHELAWDVGTGSGQAAASLSGIFE--NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQS 99 (265)
Q Consensus 23 l~~~l~~~~-~~~~~vlDvGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 99 (265)
.+++..... .-..-|||+|-|+|..=-+|.+.++ +|+++|-.-..-..+. -+.-.++.++++-+...+. ..-..
T Consensus 29 ~L~~a~~~v~~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~-P~~e~~ilGdi~~tL~~~~--~r~g~ 105 (174)
T 3iht_A 29 CLEHAIAQTAGLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDST-PPEAQLILGDIRETLPATL--ERFGA 105 (174)
T ss_dssp HHHHHHHHTTTCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGC-CCGGGEEESCHHHHHHHHH--HHHCS
T ss_pred HHHHHHHHhcCCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCC-CchHheecccHHHHHHHHH--HhcCC
Confidence 344444443 3456699999999999999999987 5998885322111111 1445666644321111000 00134
Q ss_pred ceeEEEeccccccCChh-----HHHHHHHHHhcCCCcEEEE
Q 024647 100 TVDLVTIAQAMHWFDLP-----QFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 100 ~~Dlv~~~~~~~~~~~~-----~~l~~~~~~Lk~pgG~l~~ 135 (265)
+.-++.+....|.-+.. .+-..+..+|. |||.++-
T Consensus 106 ~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la-~GGi~vS 145 (174)
T 3iht_A 106 TASLVHADLGGHNREKNDRFARLISPLIEPHLA-QGGLMVS 145 (174)
T ss_dssp CEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEE-EEEEEEE
T ss_pred ceEEEEeecCCCCcchhHHHHHhhhHHHHHHhc-CCcEEEe
Confidence 56677776666654322 23445677888 8998775
No 385
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.76 E-value=1.1 Score=34.08 Aligned_cols=96 Identities=18% Similarity=0.067 Sum_probs=56.0
Q ss_pred CCeEEEEcCCc-ch-hHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecccc
Q 024647 34 HELAWDVGTGS-GQ-AAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAM 110 (265)
Q Consensus 34 ~~~vlDvGcG~-G~-~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~ 110 (265)
+++|+-+|||. |. ++..|.+. +.+|+++|.++..++.++. .++....++.... ..+... ..-..+|+|+....
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~g~~~~~gd~~~~-~~l~~~-~~~~~ad~vi~~~~- 114 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-EGRNVISGDATDP-DFWERI-LDTGHVKLVLLAMP- 114 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-TTCCEEECCTTCH-HHHHTB-CSCCCCCEEEECCS-
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-CCCCEEEcCCCCH-HHHHhc-cCCCCCCEEEEeCC-
Confidence 46899999985 43 33445566 7899999999998888775 3555555443110 112222 02346899987532
Q ss_pred ccCChh--HHHHHHHHHhcCCCcEEEEEe
Q 024647 111 HWFDLP--QFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 111 ~~~~~~--~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
+.. ..+-...+.+. |++.++...
T Consensus 115 ---~~~~~~~~~~~~~~~~-~~~~ii~~~ 139 (183)
T 3c85_A 115 ---HHQGNQTALEQLQRRN-YKGQIAAIA 139 (183)
T ss_dssp ---SHHHHHHHHHHHHHTT-CCSEEEEEE
T ss_pred ---ChHHHHHHHHHHHHHC-CCCEEEEEE
Confidence 211 22233455566 677776543
No 386
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=92.56 E-value=0.35 Score=45.18 Aligned_cols=105 Identities=15% Similarity=0.230 Sum_probs=61.6
Q ss_pred CCCeEEEEcCCcchhHHHHHhcC------------C--cEEEEcC---CHHHHHHHHc-CC------------------C
Q 024647 33 NHELAWDVGTGSGQAAASLSGIF------------E--NVIGTET---SPKQIEFATK-LP------------------N 76 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~------------~--~v~~vD~---s~~~~~~a~~-~~------------------~ 76 (265)
+.-+|+|+|-|+|.......+.. . +++++|. +++.+..+-. .+ +
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 34589999999997776654321 1 3899999 7777764322 11 1
Q ss_pred c---eEEe--cCCccchhhhhhc-c-CC---CCceeEEEeccccccCCh----hHHHHHHHHHhcCCCcEEEEEec
Q 024647 77 I---RYEL--TSPAMSIAELEQN-V-AA---QSTVDLVTIAQAMHWFDL----PQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 77 ~---~~~~--~~~~~~~~d~~~~-~-~~---~~~~Dlv~~~~~~~~~~~----~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
. .+.. ....+..+|+.+. + +. ...+|+++...--.-.++ ..+++.+.++++ |||++..+..
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~-~g~~~~t~~~ 220 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLAR-PGGTLATFTS 220 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEE-EEEEEEESCC
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhC-CCCEEEeccC
Confidence 1 0100 0111223444332 1 11 367999987542221222 478999999999 9999886543
No 387
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.45 E-value=0.52 Score=34.18 Aligned_cols=70 Identities=16% Similarity=0.162 Sum_probs=45.1
Q ss_pred CeEEEEcCCc-ch-hHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 35 ELAWDVGTGS-GQ-AAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 35 ~~vlDvGcG~-G~-~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
++++-+|||. |. ++..|.+.+.+|+++|.+++.++.++. .+..+..++.... ..+... ....+|+|+...
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-~~~~~~~gd~~~~-~~l~~~--~~~~~d~vi~~~ 78 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLED-EGFDAVIADPTDE-SFYRSL--DLEGVSAVLITG 78 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEECCTTCH-HHHHHS--CCTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-CCCcEEECCCCCH-HHHHhC--CcccCCEEEEec
Confidence 5789999975 32 333455567899999999999888765 3566666554211 112222 234689988754
No 388
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=92.32 E-value=0.35 Score=43.34 Aligned_cols=50 Identities=14% Similarity=0.005 Sum_probs=39.4
Q ss_pred CeEEEEcCCcchhHHHHHhcCCc-EEEEcCCHHHHHHHHc-C---CCceEEecCC
Q 024647 35 ELAWDVGTGSGQAAASLSGIFEN-VIGTETSPKQIEFATK-L---PNIRYELTSP 84 (265)
Q Consensus 35 ~~vlDvGcG~G~~~~~l~~~~~~-v~~vD~s~~~~~~a~~-~---~~~~~~~~~~ 84 (265)
.+++|+-||.|.++..+.+.+.+ |.++|+++..++.-+. . ++......++
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI 143 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDI 143 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCT
T ss_pred ceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCCCcceeccch
Confidence 57999999999999999988765 7899999998886553 2 4555666444
No 389
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.10 E-value=0.88 Score=38.25 Aligned_cols=87 Identities=18% Similarity=0.284 Sum_probs=57.5
Q ss_pred CeEEEEcCCc--chhHHHHHhcCC--cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhh-ccCCCCceeEEEeccc
Q 024647 35 ELAWDVGTGS--GQAAASLSGIFE--NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQ-NVAAQSTVDLVTIAQA 109 (265)
Q Consensus 35 ~~vlDvGcG~--G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~Dlv~~~~~ 109 (265)
++|.=||+|. |.++..|.+.+. +|+++|.+++.++.+.+...+.... .+.++ . -...|+|+.+-.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~-------~~~~~~~---~~~aDvVilavp 103 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT-------TSIAKVE---DFSPDFVMLSSP 103 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE-------SCTTGGG---GGCCSEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhc-------CCHHHHh---hccCCEEEEeCC
Confidence 6799999986 355666777777 8999999999888877542221112 12222 1 135799997643
Q ss_pred cccCChhHHHHHHHHHhcCCCcEEE
Q 024647 110 MHWFDLPQFYNQVKWVLKKPNGVIA 134 (265)
Q Consensus 110 ~~~~~~~~~l~~~~~~Lk~pgG~l~ 134 (265)
.. ....+++++...|+ ++.+++
T Consensus 104 ~~--~~~~vl~~l~~~l~-~~~iv~ 125 (314)
T 3ggo_A 104 VR--TFREIAKKLSYILS-EDATVT 125 (314)
T ss_dssp GG--GHHHHHHHHHHHSC-TTCEEE
T ss_pred HH--HHHHHHHHHhhccC-CCcEEE
Confidence 22 23467888888898 777654
No 390
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.01 E-value=1.3 Score=31.65 Aligned_cols=94 Identities=12% Similarity=0.005 Sum_probs=52.7
Q ss_pred CCeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhcc-CCCCceeEEEecccc
Q 024647 34 HELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNV-AAQSTVDLVTIAQAM 110 (265)
Q Consensus 34 ~~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~Dlv~~~~~~ 110 (265)
.++|+=+|||. | .++..|.+.+.+|+++|.++..++..+...++.....+. .+.+.+. .....+|+|+....-
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~----~~~~~l~~~~~~~~d~vi~~~~~ 79 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDC----TKIKTLEDAGIEDADMYIAVTGK 79 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCT----TSHHHHHHTTTTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCC----CCHHHHHHcCcccCCEEEEeeCC
Confidence 36788888865 3 223344556778999999999887665322455555433 1111111 112468999876422
Q ss_pred ccCChhHHHHHHHHHhcCCCcEEEE
Q 024647 111 HWFDLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 111 ~~~~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
. .....+..+.+.+. ++ .+++
T Consensus 80 ~--~~~~~~~~~~~~~~-~~-~ii~ 100 (140)
T 1lss_A 80 E--EVNLMSSLLAKSYG-IN-KTIA 100 (140)
T ss_dssp H--HHHHHHHHHHHHTT-CC-CEEE
T ss_pred c--hHHHHHHHHHHHcC-CC-EEEE
Confidence 1 11234555666677 65 4444
No 391
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=91.36 E-value=1.1 Score=37.70 Aligned_cols=103 Identities=11% Similarity=0.023 Sum_probs=64.0
Q ss_pred CeEEEEcCCcchhHHHHHh-cCCcEEEEcCCHHHHHHHHc---------CCCceEEecCCccch-hhhhhccCCCCceeE
Q 024647 35 ELAWDVGTGSGQAAASLSG-IFENVIGTETSPKQIEFATK---------LPNIRYELTSPAMSI-AELEQNVAAQSTVDL 103 (265)
Q Consensus 35 ~~vlDvGcG~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~---------~~~~~~~~~~~~~~~-~d~~~~~~~~~~~Dl 103 (265)
.-||++|||-=.....+.. ....++=|| .|.+++..++ ..+..++..+.+..- ..+....+.....-+
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt~ 182 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSARTA 182 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSCEE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCCEE
Confidence 4599999998776666652 234688888 5888776543 134556665543200 011111123345667
Q ss_pred EEeccccccCChh---HHHHHHHHHhcCCCcEEEEEecC
Q 024647 104 VTIAQAMHWFDLP---QFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 104 v~~~~~~~~~~~~---~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+++..++|+++++ .+++.+...+. ||+.+++....
T Consensus 183 ~i~Egvl~Yl~~~~~~~ll~~l~~~~~-~gs~l~~d~~~ 220 (310)
T 2uyo_A 183 WLAEGLLMYLPATAQDGLFTEIGGLSA-VGSRIAVETSP 220 (310)
T ss_dssp EEECSCGGGSCHHHHHHHHHHHHHTCC-TTCEEEEECCC
T ss_pred EEEechHhhCCHHHHHHHHHHHHHhCC-CCeEEEEEecC
Confidence 7778899999554 57777777777 88888875544
No 392
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=91.14 E-value=0.2 Score=41.78 Aligned_cols=42 Identities=19% Similarity=0.289 Sum_probs=31.0
Q ss_pred CCCCceeEEEeccccccC---------------------ChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 96 AAQSTVDLVTIAQAMHWF---------------------DLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 96 ~~~~~~Dlv~~~~~~~~~---------------------~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+++++||+|+++-..+-. ....++.++.++|+ |||.+++...
T Consensus 36 l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk-~~G~l~i~~~ 98 (297)
T 2zig_A 36 FPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLV-PGGRLVIVVG 98 (297)
T ss_dssp SCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred CCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcC-CCcEEEEEEC
Confidence 467899999998754311 12357789999999 9999987654
No 393
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=90.91 E-value=0.48 Score=40.32 Aligned_cols=95 Identities=20% Similarity=0.098 Sum_probs=55.9
Q ss_pred CCCCeEEEEcC-C-cchhHHHHHhcC--CcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEec
Q 024647 32 TNHELAWDVGT-G-SGQAAASLSGIF--ENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 32 ~~~~~vlDvGc-G-~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~ 107 (265)
.++++||-.|+ | .|.++..+++.. .+|++++ ++.-.+.++ ........... .....+.++ ..+.+|+|+-.
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~~~~-~~~~~~~~~--~~~g~Dvv~d~ 215 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFDRNA-DYVQEVKRI--SAEGVDIVLDC 215 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEETTS-CHHHHHHHH--CTTCEEEEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEcCCc-cHHHHHHHh--cCCCceEEEEC
Confidence 56789999998 4 378888888764 4788888 555566665 32222222211 111223333 24579999965
Q ss_pred cccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 108 QAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 108 ~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.. . ..+..+.+.|+ ++|++++...
T Consensus 216 ~g-----~-~~~~~~~~~l~-~~G~~v~~G~ 239 (349)
T 4a27_A 216 LC-----G-DNTGKGLSLLK-PLGTYILYGS 239 (349)
T ss_dssp CC-------------CTTEE-EEEEEEEEC-
T ss_pred CC-----c-hhHHHHHHHhh-cCCEEEEECC
Confidence 32 1 23477889999 9999987654
No 394
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=90.66 E-value=0.31 Score=42.13 Aligned_cols=75 Identities=8% Similarity=-0.001 Sum_probs=44.7
Q ss_pred CCCCeEEEEc--CCc-chhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEec
Q 024647 32 TNHELAWDVG--TGS-GQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 32 ~~~~~vlDvG--cG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~ 107 (265)
.++++||-+| +|. |.++..+++ .+++|++++.+++-++.++++................+.+. .....+|+|+-.
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~v~~~-t~~~g~d~v~d~ 247 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEA-LVSTGATIAFDA 247 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHHHHHHH-HHHHCCCEEEES
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHHHHHHH-hcCCCceEEEEC
Confidence 4567888884 442 666666665 46799999999999999987543333332211111112222 122358999865
No 395
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=90.59 E-value=0.54 Score=44.05 Aligned_cols=104 Identities=15% Similarity=0.148 Sum_probs=60.8
Q ss_pred CCCeEEEEcCCcchhHHHHHhcC--------------CcEEEEcC---CHHHHHHHHcC-------------------CC
Q 024647 33 NHELAWDVGTGSGQAAASLSGIF--------------ENVIGTET---SPKQIEFATKL-------------------PN 76 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~--------------~~v~~vD~---s~~~~~~a~~~-------------------~~ 76 (265)
+.-+|+|+|.|+|.....+.+.+ -+++.+|. +...+..+-.. ++
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 44689999999998777765431 14899999 55555542210 11
Q ss_pred ceEE-e----cCCccchhhhhhc-c-CC---CCceeEEEeccccccCC----hhHHHHHHHHHhcCCCcEEEEEe
Q 024647 77 IRYE-L----TSPAMSIAELEQN-V-AA---QSTVDLVTIAQAMHWFD----LPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 77 ~~~~-~----~~~~~~~~d~~~~-~-~~---~~~~Dlv~~~~~~~~~~----~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
..-. . ....+..+|+.+. + +. ++.+|.++....-.-.+ ...++..+.++++ |||++....
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~-~g~~~~t~~ 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTR-PGGTFSTFT 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEE-EEEEEEESC
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhC-CCCEEEecc
Confidence 1100 0 0122233555432 2 11 46799998754211112 2579999999999 999987543
No 396
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.55 E-value=1.8 Score=37.87 Aligned_cols=95 Identities=15% Similarity=0.061 Sum_probs=60.9
Q ss_pred CCeEEEEcCCc-chh-HHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhcc-CCCCceeEEEecccc
Q 024647 34 HELAWDVGTGS-GQA-AASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNV-AAQSTVDLVTIAQAM 110 (265)
Q Consensus 34 ~~~vlDvGcG~-G~~-~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~Dlv~~~~~~ 110 (265)
.++|+=+|||. |.. +..|.+.+..|+++|.++..++.++. .++..+.+++ .+.+.+. ..-...|+|++...
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~-~g~~vi~GDa----t~~~~L~~agi~~A~~viv~~~- 77 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK-FGMKVFYGDA----TRMDLLESAGAAKAEVLINAID- 77 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH-TTCCCEESCT----TCHHHHHHTTTTTCSEEEECCS-
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh-CCCeEEEcCC----CCHHHHHhcCCCccCEEEECCC-
Confidence 46789999975 433 33445567789999999999998876 3566677655 2222221 12356898887632
Q ss_pred ccCChh--HHHHHHHHHhcCCCcEEEEEec
Q 024647 111 HWFDLP--QFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 111 ~~~~~~--~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
+.. ..+-...+-+. |+..++.-..
T Consensus 78 ---~~~~n~~i~~~ar~~~-p~~~Iiara~ 103 (413)
T 3l9w_A 78 ---DPQTNLQLTEMVKEHF-PHLQIIARAR 103 (413)
T ss_dssp ---SHHHHHHHHHHHHHHC-TTCEEEEEES
T ss_pred ---ChHHHHHHHHHHHHhC-CCCeEEEEEC
Confidence 222 34556677788 7877766443
No 397
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.79 E-value=0.3 Score=42.33 Aligned_cols=98 Identities=14% Similarity=0.123 Sum_probs=58.8
Q ss_pred CCCeEEEEcCCc-chhHHHHH-hcCCcEEEEcCCHHHHHHHHcCCCceEEecCC-------c----------cchhhhhh
Q 024647 33 NHELAWDVGTGS-GQAAASLS-GIFENVIGTETSPKQIEFATKLPNIRYELTSP-------A----------MSIAELEQ 93 (265)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~-------~----------~~~~d~~~ 93 (265)
++.+|+-+|+|. |.....++ ..+++|+++|.++..++.+... +..+...+. . ....++.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l-Ga~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV-GAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT-TCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 567899999996 65555544 4578999999999988888763 333332110 0 00011222
Q ss_pred ccCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEE
Q 024647 94 NVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 94 ~~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
. -...|+|+..-.+.-- .+.-+-+++.+.+| ||++++=
T Consensus 262 ~---l~~aDIVI~tv~iPg~~ap~Lvt~emv~~Mk-pGsVIVD 300 (381)
T 3p2y_A 262 A---ITKFDIVITTALVPGRPAPRLVTAAAATGMQ-PGSVVVD 300 (381)
T ss_dssp H---HTTCSEEEECCCCTTSCCCCCBCHHHHHTSC-TTCEEEE
T ss_pred H---HhcCCEEEECCCCCCcccceeecHHHHhcCC-CCcEEEE
Confidence 1 1468999965221111 12224578899999 8887763
No 398
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.51 E-value=1.6 Score=35.60 Aligned_cols=84 Identities=17% Similarity=0.158 Sum_probs=51.8
Q ss_pred eEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCce-EEecCCccchhhhhhccCCCCceeEEEecccccc
Q 024647 36 LAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATKLPNIR-YELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHW 112 (265)
Q Consensus 36 ~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~ 112 (265)
+|.=||||. | .++..|.+.+.+|+++|.+++.++.+.+. ++. ... .+.++. ...|+|+..-.-+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~-------~~~~~~----~~~D~vi~av~~~- 68 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVER-QLVDEAG-------QDLSLL----QTAKIIFLCTPIQ- 68 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TSCSEEE-------SCGGGG----TTCSEEEECSCHH-
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhC-CCCcccc-------CCHHHh----CCCCEEEEECCHH-
Confidence 577899986 3 34455666777899999999988776643 221 111 223322 3579999764211
Q ss_pred CChhHHHHHHHHHhcCCCcEEE
Q 024647 113 FDLPQFYNQVKWVLKKPNGVIA 134 (265)
Q Consensus 113 ~~~~~~l~~~~~~Lk~pgG~l~ 134 (265)
....+++++...++ ++..++
T Consensus 69 -~~~~~~~~l~~~~~-~~~~vv 88 (279)
T 2f1k_A 69 -LILPTLEKLIPHLS-PTAIVT 88 (279)
T ss_dssp -HHHHHHHHHGGGSC-TTCEEE
T ss_pred -HHHHHHHHHHhhCC-CCCEEE
Confidence 22356677777777 676554
No 399
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=89.09 E-value=0.88 Score=38.79 Aligned_cols=100 Identities=12% Similarity=0.057 Sum_probs=55.7
Q ss_pred CCC-CeEEEEcC-Cc-chhHHHHHhc-CCcEEEEcCCHHH----HHHHHcCCCceEEecCC---ccchhhhhhccC-CCC
Q 024647 32 TNH-ELAWDVGT-GS-GQAAASLSGI-FENVIGTETSPKQ----IEFATKLPNIRYELTSP---AMSIAELEQNVA-AQS 99 (265)
Q Consensus 32 ~~~-~~vlDvGc-G~-G~~~~~l~~~-~~~v~~vD~s~~~----~~~a~~~~~~~~~~~~~---~~~~~d~~~~~~-~~~ 99 (265)
.++ ++||-.|+ |. |.++..+++. +++++++..++.. .+.++++.........- ......+.++.. ..+
T Consensus 165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~ 244 (364)
T 1gu7_A 165 TPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGG 244 (364)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred CCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCC
Confidence 567 89999997 54 8888888764 6787777544332 34444432222222100 000011111100 134
Q ss_pred ceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 100 TVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 100 ~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.+|+|+-... ..... .+.++|+ ++|+++....
T Consensus 245 g~Dvvid~~G-----~~~~~-~~~~~l~-~~G~~v~~g~ 276 (364)
T 1gu7_A 245 EAKLALNCVG-----GKSST-GIARKLN-NNGLMLTYGG 276 (364)
T ss_dssp CEEEEEESSC-----HHHHH-HHHHTSC-TTCEEEECCC
T ss_pred CceEEEECCC-----chhHH-HHHHHhc-cCCEEEEecC
Confidence 6999996532 23334 7789999 9999987554
No 400
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=88.97 E-value=2.2 Score=34.76 Aligned_cols=88 Identities=18% Similarity=0.259 Sum_probs=52.7
Q ss_pred eEEEEcCCc-c-hhHHHHHhcCC--cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccccc
Q 024647 36 LAWDVGTGS-G-QAAASLSGIFE--NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMH 111 (265)
Q Consensus 36 ~vlDvGcG~-G-~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~ 111 (265)
+|.=||+|. | .++..|.+.+. +|+++|.++..++.+++..-..... .+.++. ... ..|+|+..-.-.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~-------~~~~~~-~~~-~aDvVilavp~~ 73 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT-------TSIAKV-EDF-SPDFVMLSSPVR 73 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE-------SCGGGG-GGT-CCSEEEECSCHH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccccc-------CCHHHH-hcC-CCCEEEEcCCHH
Confidence 577899986 3 44455666665 7999999999888776532111111 122222 111 579998763222
Q ss_pred cCChhHHHHHHHHHhcCCCcEEEE
Q 024647 112 WFDLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 112 ~~~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
....++.++...++ ++..++.
T Consensus 74 --~~~~v~~~l~~~l~-~~~iv~~ 94 (281)
T 2g5c_A 74 --TFREIAKKLSYILS-EDATVTD 94 (281)
T ss_dssp --HHHHHHHHHHHHSC-TTCEEEE
T ss_pred --HHHHHHHHHHhhCC-CCcEEEE
Confidence 22356777777888 7875554
No 401
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=88.14 E-value=0.68 Score=39.70 Aligned_cols=71 Identities=17% Similarity=0.068 Sum_probs=42.8
Q ss_pred CCCCeEEEEcCCc-chhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 32 TNHELAWDVGTGS-GQAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 32 ~~~~~vlDvGcG~-G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
...++|+-+|||. |...........+|+.+|.+...++.++. .+.....++ .|.+.+...-...|+|++..
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~--~~~~~~~d~----~d~~~l~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNNENLEKVKE--FATPLKVDA----SNFDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHTT--TSEEEECCT----TCHHHHHHHHTTCSEEEECC
T ss_pred CCccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc--cCCcEEEec----CCHHHHHHHHhCCCEEEEec
Confidence 3557899999963 54444333445679999999999888874 444555444 23222221113579988753
No 402
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=88.00 E-value=1.7 Score=37.57 Aligned_cols=113 Identities=19% Similarity=0.140 Sum_probs=72.5
Q ss_pred hCCCCcHHHHHHHHhhCC-CCCeEEEEcCCcchhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhh
Q 024647 15 TRPNYPEELFKFITSKTT-NHELAWDVGTGSGQAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQ 93 (265)
Q Consensus 15 ~rp~y~~~l~~~l~~~~~-~~~~vlDvGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 93 (265)
.-++||+...+.|..+.. ...+||.++-+-|.++..+... .+++.+.-|-......+. .+...... ..
T Consensus 26 ~~~~~~~~~~~~l~~~~~~~~~~~l~~n~~~g~~~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~~~~~~------~~--- 94 (381)
T 3dmg_A 26 GARGYRDPVHDLLQKTVEPFGERALDLNPGVGWGSLPLEGR-MAVERLETSRAAFRCLTA-SGLQARLA------LP--- 94 (381)
T ss_dssp TCSSSSCHHHHHHHTTCCCCSSEEEESSCTTSTTTGGGBTT-BEEEEEECBHHHHHHHHH-TTCCCEEC------CG---
T ss_pred CCCCCCChHHHHHHHHHHHhCCcEEEecCCCCccccccCCC-CceEEEeCcHHHHHHHHH-cCCCcccc------CC---
Confidence 445788888888888763 4568999999999988877533 567766545544444432 12211111 11
Q ss_pred ccCCCCceeEEEeccccccC--ChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 94 NVAAQSTVDLVTIAQAMHWF--DLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 94 ~~~~~~~~Dlv~~~~~~~~~--~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
+..+...||+|+....-+-- .....+.++.+.|+ |||.+++..-.
T Consensus 95 ~~~~~~~~d~v~~~~Pk~k~~~~~~~~l~~~~~~l~-~g~~i~~~g~~ 141 (381)
T 3dmg_A 95 WEAAAGAYDLVVLALPAGRGTAYVQASLVAAARALR-MGGRLYLAGDK 141 (381)
T ss_dssp GGSCTTCEEEEEEECCGGGCHHHHHHHHHHHHHHEE-EEEEEEEEEEG
T ss_pred ccCCcCCCCEEEEECCcchhHHHHHHHHHHHHHhCC-CCCEEEEEEcc
Confidence 22245689999976432211 12467888899999 99999887654
No 403
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=87.87 E-value=1.2 Score=36.67 Aligned_cols=88 Identities=23% Similarity=0.158 Sum_probs=54.1
Q ss_pred CeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHcC-----------C-------------CceEEecCCccch
Q 024647 35 ELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATKL-----------P-------------NIRYELTSPAMSI 88 (265)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----------~-------------~~~~~~~~~~~~~ 88 (265)
++|.=||+|. | .++..++..+.+|+.+|.+++.++.+.+. . ++.. .
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~------- 76 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-S------- 76 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-E-------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-e-------
Confidence 4678889986 3 44555667788999999999988776531 0 0111 1
Q ss_pred hhhhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEE
Q 024647 89 AELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIA 134 (265)
Q Consensus 89 ~d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~ 134 (265)
.++++. -...|+|+.+-.-..-....+++++...++ |+.+++
T Consensus 77 ~~~~~~---~~~aDlVi~av~~~~~~~~~v~~~l~~~~~-~~~il~ 118 (283)
T 4e12_A 77 DDLAQA---VKDADLVIEAVPESLDLKRDIYTKLGELAP-AKTIFA 118 (283)
T ss_dssp SCHHHH---TTTCSEEEECCCSCHHHHHHHHHHHHHHSC-TTCEEE
T ss_pred CCHHHH---hccCCEEEEeccCcHHHHHHHHHHHHhhCC-CCcEEE
Confidence 122221 135799997632211112457888888888 777654
No 404
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=87.80 E-value=0.84 Score=41.00 Aligned_cols=90 Identities=16% Similarity=0.086 Sum_probs=57.8
Q ss_pred CCCCCeEEEEcCCc-chhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 31 TTNHELAWDVGTGS-GQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 31 ~~~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
...+++|+-+|+|. |......++ .+.+|+++|+++..++.++.. +.... + +++. . ...|+|+...
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~-Ga~~~--~-------l~e~-l--~~aDvVi~at 337 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMME-GFDVV--T-------VEEA-I--GDADIVVTAT 337 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCEEC--C-------HHHH-G--GGCSEEEECS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCEEe--c-------HHHH-H--hCCCEEEECC
Confidence 35678999999986 555544444 467899999999988777653 33321 1 2222 1 3579999764
Q ss_pred ccccCChhHHH-HHHHHHhcCCCcEEEEEecC
Q 024647 109 AMHWFDLPQFY-NQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 109 ~~~~~~~~~~l-~~~~~~Lk~pgG~l~~~~~~ 139 (265)
.-. ..+ .+..+.|| +||+++.....
T Consensus 338 gt~-----~~i~~~~l~~mk-~ggilvnvG~~ 363 (494)
T 3ce6_A 338 GNK-----DIIMLEHIKAMK-DHAILGNIGHF 363 (494)
T ss_dssp SSS-----CSBCHHHHHHSC-TTCEEEECSSS
T ss_pred CCH-----HHHHHHHHHhcC-CCcEEEEeCCC
Confidence 221 122 35677799 99998865544
No 405
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=87.64 E-value=2.7 Score=32.84 Aligned_cols=95 Identities=14% Similarity=-0.015 Sum_probs=54.1
Q ss_pred CeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecccccc
Q 024647 35 ELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHW 112 (265)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~ 112 (265)
++|+=+|+|. | .++..|.+.+.+|+++|.+++.++...+..+..+..+++... ..++.. .-..+|+|++...-.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~-~~l~~a--~i~~ad~vi~~~~~d- 76 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHK-EILRDA--EVSKNDVVVILTPRD- 76 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSH-HHHHHH--TCCTTCEEEECCSCH-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCH-HHHHhc--CcccCCEEEEecCCc-
Confidence 3577788754 2 233334456778999999999888754324667777665211 112222 234689998763211
Q ss_pred CChhHHHHHHHHHhcCCCcEEEE
Q 024647 113 FDLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 113 ~~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
.....+....+.+. |...++.
T Consensus 77 -~~n~~~~~~a~~~~-~~~~iia 97 (218)
T 3l4b_C 77 -EVNLFIAQLVMKDF-GVKRVVS 97 (218)
T ss_dssp -HHHHHHHHHHHHTS-CCCEEEE
T ss_pred -HHHHHHHHHHHHHc-CCCeEEE
Confidence 11234455555566 5666655
No 406
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.49 E-value=1.3 Score=38.06 Aligned_cols=89 Identities=11% Similarity=0.079 Sum_probs=55.9
Q ss_pred CCeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccccc
Q 024647 34 HELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMH 111 (265)
Q Consensus 34 ~~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~ 111 (265)
.++|.=||+|. | .++..|++.+.+|++.|.++..++.+... ++... .+.++.-......|+|+..-.-.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~-g~~~~--------~s~~e~~~~a~~~DvVi~~vp~~ 92 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALERE-GIAGA--------RSIEEFCAKLVKPRVVWLMVPAA 92 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-TCBCC--------SSHHHHHHHSCSSCEEEECSCGG
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-CCEEe--------CCHHHHHhcCCCCCEEEEeCCHH
Confidence 36788999986 3 44556777888999999999988877652 22211 12222211112459888764332
Q ss_pred cCChhHHHHHHHHHhcCCCcEEE
Q 024647 112 WFDLPQFYNQVKWVLKKPNGVIA 134 (265)
Q Consensus 112 ~~~~~~~l~~~~~~Lk~pgG~l~ 134 (265)
....++..+...|+ +|.+++
T Consensus 93 --~v~~vl~~l~~~l~-~g~iiI 112 (358)
T 4e21_A 93 --VVDSMLQRMTPLLA-ANDIVI 112 (358)
T ss_dssp --GHHHHHHHHGGGCC-TTCEEE
T ss_pred --HHHHHHHHHHhhCC-CCCEEE
Confidence 34567777777787 665554
No 407
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=87.30 E-value=0.45 Score=41.59 Aligned_cols=98 Identities=15% Similarity=0.164 Sum_probs=58.7
Q ss_pred CCCeEEEEcCCc-chhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCc----------cc-----------hh
Q 024647 33 NHELAWDVGTGS-GQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPA----------MS-----------IA 89 (265)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~----------~~-----------~~ 89 (265)
++.+|+-+|+|. |.....++. .+++|+++|.++..++.++.. +..+.....+ .. ..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~-G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASL-GAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHT-TCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc-CCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 468899999996 666655554 567999999999988888764 3333221100 00 01
Q ss_pred hhhhccCCCCceeEEEeccccccC-ChhHHHHHHHHHhcCCCcEEEE
Q 024647 90 ELEQNVAAQSTVDLVTIAQAMHWF-DLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 90 d~~~~~~~~~~~Dlv~~~~~~~~~-~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
++.+. -...|+|+..-.+.-- .+.-+-+++.+.+| ||++++=
T Consensus 268 ~l~e~---l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk-~GsVIVD 310 (405)
T 4dio_A 268 LVAEH---IAKQDIVITTALIPGRPAPRLVTREMLDSMK-PGSVVVD 310 (405)
T ss_dssp HHHHH---HHTCSEEEECCCCSSSCCCCCBCHHHHTTSC-TTCEEEE
T ss_pred HHHHH---hcCCCEEEECCcCCCCCCCEEecHHHHhcCC-CCCEEEE
Confidence 11111 1357999864221111 22234578899999 8988764
No 408
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=87.09 E-value=0.83 Score=38.57 Aligned_cols=42 Identities=19% Similarity=0.193 Sum_probs=32.1
Q ss_pred CCCCceeEEEecccccc--------------C-ChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 96 AAQSTVDLVTIAQAMHW--------------F-DLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 96 ~~~~~~Dlv~~~~~~~~--------------~-~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
++++++|+|++.-...- . ....++.++.++|+ |||.++++..
T Consensus 29 l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk-~~G~i~i~~~ 85 (323)
T 1boo_A 29 FPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLK-PDGSFVVDFG 85 (323)
T ss_dssp SCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred CCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCc-CCcEEEEEEC
Confidence 46789999999864421 1 24578899999999 9999988654
No 409
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=87.08 E-value=0.47 Score=40.77 Aligned_cols=97 Identities=18% Similarity=0.163 Sum_probs=57.3
Q ss_pred CCeEEEEcCCc-chhHHHHH-hcCCcEEEEcCCHHHHHHHHcC--CCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 34 HELAWDVGTGS-GQAAASLS-GIFENVIGTETSPKQIEFATKL--PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 34 ~~~vlDvGcG~-G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
+.+|+-+|+|. |.....++ ..+++|+++|.++.-++.+++. ..+....... .++.+.- ..+|+|+....
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~DvVI~~~~ 239 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNS----AEIETAV---AEADLLIGAVL 239 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCH----HHHHHHH---HTCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCH----HHHHHHH---cCCCEEEECCC
Confidence 47899999974 55444444 3567999999999888776542 1221222111 2332211 25899987654
Q ss_pred cccC-ChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 110 MHWF-DLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 110 ~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
.... .+.-+.+++.+.|+ |||+++-..+
T Consensus 240 ~~~~~~~~li~~~~~~~~~-~g~~ivdv~~ 268 (361)
T 1pjc_A 240 VPGRRAPILVPASLVEQMR-TGSVIVDVAV 268 (361)
T ss_dssp CTTSSCCCCBCHHHHTTSC-TTCEEEETTC
T ss_pred cCCCCCCeecCHHHHhhCC-CCCEEEEEec
Confidence 3221 12223456778899 8998876444
No 410
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.90 E-value=0.58 Score=40.45 Aligned_cols=97 Identities=21% Similarity=0.174 Sum_probs=56.9
Q ss_pred CCCeEEEEcCCc-chhHHHHHh-cCCcEEEEcCCHHHHHHHHc-CC-CceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 33 NHELAWDVGTGS-GQAAASLSG-IFENVIGTETSPKQIEFATK-LP-NIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~-~~-~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
++.+|+-+|+|. |......+. .+.+|+++|.++..++.+++ .. .+....... .++.+.- ..+|+|+...
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~----~~l~~~l---~~aDvVi~~~ 239 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSA----YELEGAV---KRADLVIGAV 239 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCH----HHHHHHH---HHCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCH----HHHHHHH---cCCCEEEECC
Confidence 467899999975 554444443 45689999999998877654 21 121211111 2333321 2579998743
Q ss_pred ccccCC-hhHHHHHHHHHhcCCCcEEEEEe
Q 024647 109 AMHWFD-LPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 109 ~~~~~~-~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
.....+ +.-+.+++.+.++ |||+++-..
T Consensus 240 ~~p~~~t~~li~~~~l~~mk-~g~~iV~va 268 (377)
T 2vhw_A 240 LVPGAKAPKLVSNSLVAHMK-PGAVLVDIA 268 (377)
T ss_dssp CCTTSCCCCCBCHHHHTTSC-TTCEEEEGG
T ss_pred CcCCCCCcceecHHHHhcCC-CCcEEEEEe
Confidence 222111 1123567778899 899887543
No 411
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=86.87 E-value=4 Score=32.18 Aligned_cols=93 Identities=6% Similarity=-0.085 Sum_probs=56.4
Q ss_pred CCCeEEEEcCCcchhHHHHHh----cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhcc-CCCCceeEEEec
Q 024647 33 NHELAWDVGTGSGQAAASLSG----IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNV-AAQSTVDLVTIA 107 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~Dlv~~~ 107 (265)
..++++=+||| ..+..+++ .+. |+++|.++..++.++ .++.+..+++ .+.+.+. ..-...|+|++.
T Consensus 8 ~~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~~~~~i~gd~----~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 8 KSRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR--SGANFVHGDP----TRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp --CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--TTCEEEESCT----TCHHHHHHTTCTTCSEEEEC
T ss_pred CCCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--cCCeEEEcCC----CCHHHHHhcCcchhcEEEEc
Confidence 34678989885 55555544 345 999999999888777 5678888665 2222221 123468998876
Q ss_pred cccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 108 QAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 108 ~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
..-. ..........+-+. |+..++.-.
T Consensus 79 ~~~d--~~n~~~~~~a~~~~-~~~~iia~~ 105 (234)
T 2aef_A 79 LESD--SETIHCILGIRKID-ESVRIIAEA 105 (234)
T ss_dssp CSCH--HHHHHHHHHHHHHC-SSSEEEEEC
T ss_pred CCCc--HHHHHHHHHHHHHC-CCCeEEEEE
Confidence 3211 11234455667778 776666543
No 412
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=86.48 E-value=4.5 Score=34.26 Aligned_cols=99 Identities=11% Similarity=0.033 Sum_probs=55.6
Q ss_pred CCCCCeEEEEcC-C-cchhHHHHHhc-CCcEE-EEcCCHH---HHHHHHcCCCceEEecCCccchhhhhhccCCCCceeE
Q 024647 31 TTNHELAWDVGT-G-SGQAAASLSGI-FENVI-GTETSPK---QIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDL 103 (265)
Q Consensus 31 ~~~~~~vlDvGc-G-~G~~~~~l~~~-~~~v~-~vD~s~~---~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dl 103 (265)
..++++||-+|+ | .|.++..+++. +++++ .++.++. .++.++++.........- ....++.+.....+.+|+
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~~~~~~~Dv 243 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEE-LRRPEMKNFFKDMPQPRL 243 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHH-HHSGGGGGTTSSSCCCSE
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCc-chHHHHHHHHhCCCCceE
Confidence 357789999997 4 48888888875 56654 4555432 355666543222222100 000122222111124899
Q ss_pred EEeccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 104 VTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 104 v~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
|+-.-. .. .+.++.++|+ ++|+++...
T Consensus 244 vid~~g-----~~-~~~~~~~~l~-~~G~iv~~G 270 (357)
T 1zsy_A 244 ALNCVG-----GK-SSTELLRQLA-RGGTMVTYG 270 (357)
T ss_dssp EEESSC-----HH-HHHHHHTTSC-TTCEEEECC
T ss_pred EEECCC-----cH-HHHHHHHhhC-CCCEEEEEe
Confidence 986522 22 3356789999 999998764
No 413
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=86.38 E-value=4.5 Score=29.52 Aligned_cols=97 Identities=9% Similarity=-0.077 Sum_probs=53.6
Q ss_pred CeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCC-HHHHHHHHc--CCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 35 ELAWDVGTGS-G-QAAASLSGIFENVIGTETS-PKQIEFATK--LPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s-~~~~~~a~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
.+++=+|||. | .++..|.+.+.+|+++|.+ +..++.... ..++.+..+++... ..+... .-...|+|++...
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~-~~l~~a--~i~~ad~vi~~~~ 80 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDS-SVLKKA--GIDRCRAILALSD 80 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSH-HHHHHH--TTTTCSEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCH-HHHHHc--ChhhCCEEEEecC
Confidence 5688888754 2 2233344567789999997 453433321 24677777665211 112222 2346899887632
Q ss_pred cccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 110 MHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 110 ~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
-. .....+....+.+. |...++.-.
T Consensus 81 ~d--~~n~~~~~~a~~~~-~~~~ii~~~ 105 (153)
T 1id1_A 81 ND--ADNAFVVLSAKDMS-SDVKTVLAV 105 (153)
T ss_dssp CH--HHHHHHHHHHHHHT-SSSCEEEEC
T ss_pred Ch--HHHHHHHHHHHHHC-CCCEEEEEE
Confidence 11 12235556667777 677666533
No 414
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=86.31 E-value=4.8 Score=33.17 Aligned_cols=89 Identities=10% Similarity=0.048 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCc-chhHHH-HHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecccc
Q 024647 33 NHELAWDVGTGS-GQAAAS-LSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAM 110 (265)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~-l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~ 110 (265)
.+++|+=+|+|. |..... +...+.+|+++|.++...+.+... ++..... .++++. + ...|+|+.....
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~~~~------~~l~~~-l--~~aDvVi~~~p~ 223 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEM-GMEPFHI------SKAAQE-L--RDVDVCINTIPA 223 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TSEEEEG------GGHHHH-T--TTCSEEEECCSS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-CCeecCh------hhHHHH-h--cCCCEEEECCCh
Confidence 568899999875 443333 334466899999998876655432 3333210 233333 1 358999988776
Q ss_pred ccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 111 HWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 111 ~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
|.++. +....++ ||+.++-..
T Consensus 224 ~~i~~-----~~l~~mk-~~~~lin~a 244 (293)
T 3d4o_A 224 LVVTA-----NVLAEMP-SHTFVIDLA 244 (293)
T ss_dssp CCBCH-----HHHHHSC-TTCEEEECS
T ss_pred HHhCH-----HHHHhcC-CCCEEEEec
Confidence 65554 2445788 888776443
No 415
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=85.73 E-value=5.6 Score=34.85 Aligned_cols=38 Identities=29% Similarity=0.350 Sum_probs=29.3
Q ss_pred eEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHc
Q 024647 36 LAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATK 73 (265)
Q Consensus 36 ~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (265)
+|.-||+|. | .++..|++.+.+|+++|.+++.++..++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~ 41 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ 41 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhC
Confidence 577789886 4 3445567778899999999998887764
No 416
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=85.66 E-value=4.5 Score=35.77 Aligned_cols=39 Identities=26% Similarity=0.198 Sum_probs=29.9
Q ss_pred CeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHc
Q 024647 35 ELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATK 73 (265)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (265)
++|.-||+|. | .++..|++.+.+|+++|+++..++..++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~ 43 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNS 43 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHc
Confidence 4678899986 3 3444566778899999999998887664
No 417
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=85.60 E-value=4.3 Score=35.99 Aligned_cols=89 Identities=25% Similarity=0.250 Sum_probs=54.9
Q ss_pred CeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHcC--------------C-----Cc-eEEecCCccchhhhh
Q 024647 35 ELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATKL--------------P-----NI-RYELTSPAMSIAELE 92 (265)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--------------~-----~~-~~~~~~~~~~~~d~~ 92 (265)
++|.-||+|. | .++..++..+.+|+++|.+++.++.++.. . .. .... .+.+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~-------~~~~ 110 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFS-------SSTK 110 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEE-------SCGG
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhc-------CCHH
Confidence 5689999997 3 45556777788999999999888765420 0 00 0111 2222
Q ss_pred hccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEE
Q 024647 93 QNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 93 ~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
.+ ...|+|+.+-.-..--...++.++...++ |+.+++.
T Consensus 111 ~~----~~aDlVIeaVpe~~~~k~~v~~~l~~~~~-~~~ii~s 148 (463)
T 1zcj_A 111 EL----STVDLVVEAVFEDMNLKKKVFAELSALCK-PGAFLCT 148 (463)
T ss_dssp GG----TTCSEEEECCCSCHHHHHHHHHHHHHHSC-TTCEEEE
T ss_pred HH----CCCCEEEEcCCCCHHHHHHHHHHHHhhCC-CCeEEEe
Confidence 22 35799997642100002467888888888 7776654
No 418
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=85.48 E-value=0.69 Score=39.83 Aligned_cols=97 Identities=16% Similarity=0.181 Sum_probs=55.1
Q ss_pred CCCeEEEEcCCc-chhHHHHH-hcCCcEEEEcCCHHHHHHHHc-CC-CceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 33 NHELAWDVGTGS-GQAAASLS-GIFENVIGTETSPKQIEFATK-LP-NIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~-~~-~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
++++|+-+|+|. |......+ ..+++|+++|.++..++.+.+ .. .+....... .++++.- ..+|+|+..-
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~----~~l~~~~---~~~DvVi~~~ 237 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATE----ANIKKSV---QHADLLIGAV 237 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCH----HHHHHHH---HHCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCH----HHHHHHH---hCCCEEEECC
Confidence 357899999964 44333333 456799999999988776654 21 111111111 2333321 2589998764
Q ss_pred ccccC-ChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 109 AMHWF-DLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 109 ~~~~~-~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
..... .+.-+.+++.+.++ +||.++...
T Consensus 238 g~~~~~~~~li~~~~l~~mk-~gg~iV~v~ 266 (369)
T 2eez_A 238 LVPGAKAPKLVTRDMLSLMK-EGAVIVDVA 266 (369)
T ss_dssp C-------CCSCHHHHTTSC-TTCEEEECC
T ss_pred CCCccccchhHHHHHHHhhc-CCCEEEEEe
Confidence 43211 11123567788899 899887543
No 419
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.44 E-value=4.5 Score=33.45 Aligned_cols=89 Identities=17% Similarity=0.173 Sum_probs=55.8
Q ss_pred CCCeEEEEcCCc-chhHHH-HHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecccc
Q 024647 33 NHELAWDVGTGS-GQAAAS-LSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAM 110 (265)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~-l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~ 110 (265)
.+++|+=+|+|. |..... +...+.+|+++|.++...+.+.+. ++..... .+++++ + ...|+|+.....
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~-g~~~~~~------~~l~~~-l--~~aDvVi~~~p~ 225 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEM-GLVPFHT------DELKEH-V--KDIDICINTIPS 225 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCEEEEG------GGHHHH-S--TTCSEEEECCSS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-CCeEEch------hhHHHH-h--hCCCEEEECCCh
Confidence 568899999975 433333 334566899999999866655432 3332211 233333 1 358999998877
Q ss_pred ccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 111 HWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 111 ~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
|.++. +....++ ||+.++=..
T Consensus 226 ~~i~~-----~~~~~mk-~g~~lin~a 246 (300)
T 2rir_A 226 MILNQ-----TVLSSMT-PKTLILDLA 246 (300)
T ss_dssp CCBCH-----HHHTTSC-TTCEEEECS
T ss_pred hhhCH-----HHHHhCC-CCCEEEEEe
Confidence 76653 2456788 888776433
No 420
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=85.38 E-value=0.53 Score=41.13 Aligned_cols=100 Identities=16% Similarity=0.162 Sum_probs=57.9
Q ss_pred CCCeEEEEcCCc-chhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCc--------c----c-------hhhh
Q 024647 33 NHELAWDVGTGS-GQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPA--------M----S-------IAEL 91 (265)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~--------~----~-------~~d~ 91 (265)
++.+|+-+|+|. |..+..++. .+.+|+++|.++..++.++.. +..+...+.. . . ..++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~l-Ga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSM-GAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHT-TCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc-CCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 467899999986 666666555 467899999999988877654 3333211100 0 0 0012
Q ss_pred hhccCCCCceeEEEeccccccCChhH-HHHHHHHHhcCCCcEEEEEe
Q 024647 92 EQNVAAQSTVDLVTIAQAMHWFDLPQ-FYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 92 ~~~~~~~~~~Dlv~~~~~~~~~~~~~-~l~~~~~~Lk~pgG~l~~~~ 137 (265)
.+.- ...|+|+..-.+.-...+. +-+++.+.++ |||+++-..
T Consensus 250 ~e~~---~~aDvVI~~~~~pg~~ap~li~~~~l~~mk-~g~vIVdva 292 (401)
T 1x13_A 250 AAQA---KEVDIIVTTALIPGKPAPKLITREMVDSMK-AGSVIVDLA 292 (401)
T ss_dssp HHHH---HHCSEEEECCCCTTSCCCCCBCHHHHHTSC-TTCEEEETT
T ss_pred HHHh---CCCCEEEECCccCCCCCCeeeCHHHHhcCC-CCcEEEEEc
Confidence 2221 2479998753221111112 2357788899 899887533
No 421
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=84.77 E-value=2.3 Score=41.53 Aligned_cols=78 Identities=10% Similarity=0.025 Sum_probs=52.5
Q ss_pred CCeEEEEcCCcchhHHHHHhcCC-c-EEEEcCCHHHHHHHHc-CCCceEEecCCccch-----hhhhhc---cC-CCCce
Q 024647 34 HELAWDVGTGSGQAAASLSGIFE-N-VIGTETSPKQIEFATK-LPNIRYELTSPAMSI-----AELEQN---VA-AQSTV 101 (265)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~~~~~-~-v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~-----~d~~~~---~~-~~~~~ 101 (265)
..+++|+-||.|.++..|.+.+. + +.++|+++..++.-+. +++..+...++..+. +|+... .+ ..+.+
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~~~~v 619 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDV 619 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTCCBCCCTTTC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhhhhhhhhcccCCCe
Confidence 35799999999999999998885 4 7799999999886553 567666664432110 111110 11 23579
Q ss_pred eEEEeccccc
Q 024647 102 DLVTIAQAMH 111 (265)
Q Consensus 102 Dlv~~~~~~~ 111 (265)
|+|+......
T Consensus 620 Dll~GGpPCQ 629 (1002)
T 3swr_A 620 EMLCGGPPCQ 629 (1002)
T ss_dssp SEEEECCCCT
T ss_pred eEEEEcCCCc
Confidence 9999877443
No 422
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=84.69 E-value=7.2 Score=26.45 Aligned_cols=70 Identities=20% Similarity=0.127 Sum_probs=42.5
Q ss_pred CCeEEEEcCCc-ch-hHHHHHhcC-CcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 34 HELAWDVGTGS-GQ-AAASLSGIF-ENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 34 ~~~vlDvGcG~-G~-~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
.++|+-+|+|. |. +...|.+.+ .+|+++|.++..++.+.. .++.....+.... .++... + ..+|+|+...
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~-~~~~~~-~--~~~d~vi~~~ 77 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR-MGVATKQVDAKDE-AGLAKA-L--GGFDAVISAA 77 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT-TTCEEEECCTTCH-HHHHHH-T--TTCSEEEECS
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh-CCCcEEEecCCCH-HHHHHH-H--cCCCEEEECC
Confidence 35789999953 32 222344566 679999999988877763 4566666544211 122222 1 3589988764
No 423
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=83.49 E-value=2.3 Score=35.26 Aligned_cols=37 Identities=14% Similarity=0.116 Sum_probs=29.8
Q ss_pred CeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHH
Q 024647 35 ELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFA 71 (265)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a 71 (265)
++|.-||+|. | .++..+++.+.+|+++|.+++.++.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~ 54 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKS 54 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 5689999997 4 35666777888999999999888765
No 424
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=83.24 E-value=9.3 Score=29.39 Aligned_cols=94 Identities=15% Similarity=0.186 Sum_probs=56.2
Q ss_pred CeEEEEcCCcchhHHHH----HhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecccc
Q 024647 35 ELAWDVGTGSGQAAASL----SGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAM 110 (265)
Q Consensus 35 ~~vlDvGcG~G~~~~~l----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~ 110 (265)
++||-.|+ +|.++..+ ++.+.+|++++.++..+..... .++.+...+.. |.+. . .-+.+|.|+.....
T Consensus 1 MkilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~D~~----d~~~-~-~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG-ATVATLVKEPL----VLTE-A-DLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC-TTSEEEECCGG----GCCH-H-HHTTCSEEEECCCC
T ss_pred CEEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccccC-CCceEEecccc----cccH-h-hcccCCEEEECCcc
Confidence 35677775 45555554 4567789999999887765543 57888886552 2211 1 11358999987765
Q ss_pred ccC-C----hhHHHHHHHHHhcCCCcEEEEE
Q 024647 111 HWF-D----LPQFYNQVKWVLKKPNGVIATW 136 (265)
Q Consensus 111 ~~~-~----~~~~l~~~~~~Lk~pgG~l~~~ 136 (265)
.|. + .......+.+.+++.|+.+++.
T Consensus 73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred CCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 443 1 1234556666665245566654
No 425
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=83.09 E-value=4.2 Score=34.24 Aligned_cols=95 Identities=15% Similarity=0.120 Sum_probs=55.3
Q ss_pred CeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEec------CCccchhhhhhccCCCCceeEEEe
Q 024647 35 ELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELT------SPAMSIAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~------~~~~~~~d~~~~~~~~~~~Dlv~~ 106 (265)
++|.=+|||. | .++..|++.+.+|+++|.+++.++..++...+..... .......+.++. -..+|+|+.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~D~vi~ 81 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA---VKDADVILI 81 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH---HTTCSEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH---HhcCCEEEE
Confidence 5789999986 3 4445566777889999999988776654212221110 000000222221 125899987
Q ss_pred ccccccCChhHHHHHHHHHhcCCCcEEEE
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
.-.-+ ....+++.+...++ ++..++.
T Consensus 82 ~v~~~--~~~~~~~~l~~~l~-~~~~vv~ 107 (359)
T 1bg6_A 82 VVPAI--HHASIAANIASYIS-EGQLIIL 107 (359)
T ss_dssp CSCGG--GHHHHHHHHGGGCC-TTCEEEE
T ss_pred eCCch--HHHHHHHHHHHhCC-CCCEEEE
Confidence 64322 12567777878888 7765554
No 426
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=83.02 E-value=7.9 Score=31.64 Aligned_cols=101 Identities=12% Similarity=0.066 Sum_probs=59.6
Q ss_pred CeEEEEcCCc-c-hhHHHHHhcCC---cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 35 ELAWDVGTGS-G-QAAASLSGIFE---NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
++|.=||||. | .+...|.+.+. +|+..|.+++.++.+.+.-++.... +..+. . ...|+|+..--
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~--------~~~~~-~--~~aDvVilav~ 72 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQ--------DNRQG-A--LNADVVVLAVK 72 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEES--------CHHHH-H--SSCSEEEECSC
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeC--------ChHHH-H--hcCCeEEEEeC
Confidence 5688899986 3 35555666665 7999999999888776533444322 22221 1 24699997642
Q ss_pred cccCChhHHHHHHHHH-hcCCCcEEEEEecCCCCCChHHHHhh
Q 024647 110 MHWFDLPQFYNQVKWV-LKKPNGVIATWCYTVPEVNVSVDAVF 151 (265)
Q Consensus 110 ~~~~~~~~~l~~~~~~-Lk~pgG~l~~~~~~~~~~~~~~~~~~ 151 (265)
- -....+++++... ++ ++-.+ +.....-. ...+.+.+
T Consensus 73 p--~~~~~vl~~l~~~~l~-~~~ii-iS~~agi~-~~~l~~~l 110 (280)
T 3tri_A 73 P--HQIKMVCEELKDILSE-TKILV-ISLAVGVT-TPLIEKWL 110 (280)
T ss_dssp G--GGHHHHHHHHHHHHHT-TTCEE-EECCTTCC-HHHHHHHH
T ss_pred H--HHHHHHHHHHHhhccC-CCeEE-EEecCCCC-HHHHHHHc
Confidence 1 1335678888877 77 55444 43332222 24455544
No 427
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=82.78 E-value=3.4 Score=34.70 Aligned_cols=38 Identities=24% Similarity=0.023 Sum_probs=30.6
Q ss_pred CeEEEEcCCc--chhHHHHHhcCCcEEEEcCCHHHHHHHH
Q 024647 35 ELAWDVGTGS--GQAAASLSGIFENVIGTETSPKQIEFAT 72 (265)
Q Consensus 35 ~~vlDvGcG~--G~~~~~l~~~~~~v~~vD~s~~~~~~a~ 72 (265)
.+|--||+|. +.++..+++.+.+|++.|++++.++.+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 46 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGAL 46 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4688899997 3456667788889999999999888764
No 428
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=82.54 E-value=2.8 Score=29.84 Aligned_cols=94 Identities=12% Similarity=0.079 Sum_probs=49.9
Q ss_pred CeEEEEcCCc-ch-hHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecccccc
Q 024647 35 ELAWDVGTGS-GQ-AAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHW 112 (265)
Q Consensus 35 ~~vlDvGcG~-G~-~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~ 112 (265)
++|+-+|||. |. +...|.+.+.+|+++|.++..++.++.. .......+... ...+... ....+|+|+....-..
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-~~~~~~~d~~~-~~~l~~~--~~~~~d~vi~~~~~~~ 82 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY-ATHAVIANATE-ENELLSL--GIRNFEYVIVAIGANI 82 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT-CSEEEECCTTC-HHHHHTT--TGGGCSEEEECCCSCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-CCEEEEeCCCC-HHHHHhc--CCCCCCEEEECCCCch
Confidence 5689999854 32 2223345567899999999877765542 34445444311 0112221 1246899987643210
Q ss_pred CChhHHHHHHHHHhcCCCcEEEE
Q 024647 113 FDLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 113 ~~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
+....+....+.+. +. .++.
T Consensus 83 -~~~~~~~~~~~~~~-~~-~ii~ 102 (144)
T 2hmt_A 83 -QASTLTTLLLKELD-IP-NIWV 102 (144)
T ss_dssp -HHHHHHHHHHHHTT-CS-EEEE
T ss_pred -HHHHHHHHHHHHcC-CC-eEEE
Confidence 11223445555566 65 5444
No 429
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=82.53 E-value=5.7 Score=32.60 Aligned_cols=95 Identities=15% Similarity=0.150 Sum_probs=54.6
Q ss_pred CeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEec------CCccchhhhhhccCCCCceeEEEe
Q 024647 35 ELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELT------SPAMSIAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~------~~~~~~~d~~~~~~~~~~~Dlv~~ 106 (265)
++|.=||+|. | .++..|++.+.+|+.+|.+++.++..++. ++..... .... .+..+....-..+|+|+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~-g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN-GLIADFNGEEVVANLPI--FSPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH-CEEEEETTEEEEECCCE--ECGGGCCTTSCCCSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC-CEEEEeCCCeeEeccee--ecchhhcccCCCCCEEEE
Confidence 4688999986 3 44455667778999999999888776542 2222210 0100 011111101126899997
Q ss_pred ccccccCChhHHHHHHHHHhcCCCcEEEE
Q 024647 107 AQAMHWFDLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
.-.-+ ....+++++...++ ++..++.
T Consensus 81 ~v~~~--~~~~v~~~l~~~l~-~~~~iv~ 106 (316)
T 2ew2_A 81 LTKAQ--QLDAMFKAIQPMIT-EKTYVLC 106 (316)
T ss_dssp CSCHH--HHHHHHHHHGGGCC-TTCEEEE
T ss_pred Eeccc--cHHHHHHHHHHhcC-CCCEEEE
Confidence 64321 23456777777787 6766554
No 430
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=82.50 E-value=6.4 Score=31.26 Aligned_cols=75 Identities=17% Similarity=0.108 Sum_probs=45.1
Q ss_pred CeEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHHc-CCCceEEecCCccchhhhhhc----cCCCCceeEEEe
Q 024647 35 ELAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFATK-LPNIRYELTSPAMSIAELEQN----VAAQSTVDLVTI 106 (265)
Q Consensus 35 ~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~----~~~~~~~Dlv~~ 106 (265)
+++|-.|++.| .++..|++.+.+|+.+|.++..++.... ..++.+...+.... .+++.+ ...-+.+|+++.
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~id~lv~ 81 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADP-LTLKKFVEYAMEKLQRIDVLVN 81 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSH-HHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeEEeeCCCH-HHHHHHHHHHHHHcCCCCEEEE
Confidence 46777777655 3444566778899999999987776543 45666777655221 111111 001146899987
Q ss_pred cccc
Q 024647 107 AQAM 110 (265)
Q Consensus 107 ~~~~ 110 (265)
+-..
T Consensus 82 nAg~ 85 (247)
T 3dii_A 82 NACR 85 (247)
T ss_dssp CCC-
T ss_pred CCCC
Confidence 6643
No 431
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=82.44 E-value=1.6 Score=41.63 Aligned_cols=98 Identities=18% Similarity=0.089 Sum_probs=59.2
Q ss_pred CCCCeEEEEcC-C-cchhHHHHHhc-CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 32 TNHELAWDVGT-G-SGQAAASLSGI-FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 32 ~~~~~vlDvGc-G-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
.++++||-.|+ | .|..+..+++. +++|++++.++. .+.++ +..-......-......+... .....+|+|+-..
T Consensus 344 ~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k-~~~l~-lga~~v~~~~~~~~~~~i~~~-t~g~GvDvVld~~ 420 (795)
T 3slk_A 344 RPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDK-WQAVE-LSREHLASSRTCDFEQQFLGA-TGGRGVDVVLNSL 420 (795)
T ss_dssp CTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGGG-GGGSC-SCGGGEECSSSSTHHHHHHHH-SCSSCCSEEEECC
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChHH-hhhhh-cChhheeecCChhHHHHHHHH-cCCCCeEEEEECC
Confidence 46788999995 4 48888888875 678999986552 22222 221122221110011122222 2345799999753
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEEEecC
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIATWCYT 139 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~ 139 (265)
. ...+....+.|+ |+|+++.....
T Consensus 421 g------g~~~~~~l~~l~-~~Gr~v~iG~~ 444 (795)
T 3slk_A 421 A------GEFADASLRMLP-RGGRFLELGKT 444 (795)
T ss_dssp C------TTTTHHHHTSCT-TCEEEEECCST
T ss_pred C------cHHHHHHHHHhc-CCCEEEEeccc
Confidence 2 246688899999 99999876543
No 432
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=82.33 E-value=2.1 Score=37.08 Aligned_cols=40 Identities=18% Similarity=0.166 Sum_probs=30.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhc---C----C--cEEEEcCCHHHHHHHH
Q 024647 33 NHELAWDVGTGSGQAAASLSGI---F----E--NVIGTETSPKQIEFAT 72 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~---~----~--~v~~vD~s~~~~~~a~ 72 (265)
.+-.|+|+|+|+|.+..-+.+. . . ++..||+|+...+.-+
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~ 128 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQ 128 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHH
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHH
Confidence 3456999999999998877643 1 2 5999999998876433
No 433
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=81.95 E-value=2 Score=37.12 Aligned_cols=100 Identities=14% Similarity=0.140 Sum_probs=56.9
Q ss_pred CCCeEEEEcCCc-chhHHHHHh-cCCcEEEEcCCHHHHHHHHcCCCceEEecCCc---------------------cchh
Q 024647 33 NHELAWDVGTGS-GQAAASLSG-IFENVIGTETSPKQIEFATKLPNIRYELTSPA---------------------MSIA 89 (265)
Q Consensus 33 ~~~~vlDvGcG~-G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~---------------------~~~~ 89 (265)
++.+|+-+|+|. |.....+++ .+.+|+++|.++..++.++.+ +..+...+.. ....
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~-Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 249 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESL-GGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 249 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT-TCEECCC-----------------------CCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence 568899999986 666666555 456899999998877777653 2222200000 0001
Q ss_pred hhhhccCCCCceeEEEeccccccCChhH-HHHHHHHHhcCCCcEEEEEe
Q 024647 90 ELEQNVAAQSTVDLVTIAQAMHWFDLPQ-FYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 90 d~~~~~~~~~~~Dlv~~~~~~~~~~~~~-~l~~~~~~Lk~pgG~l~~~~ 137 (265)
.+.+.- ..+|+|+....+.-...+. +.+++.+.++ |||+++-..
T Consensus 250 ~l~~~~---~~aDvVi~~~~~pg~~~~~li~~~~l~~mk-~g~vivdva 294 (384)
T 1l7d_A 250 AVLKEL---VKTDIAITTALIPGKPAPVLITEEMVTKMK-PGSVIIDLA 294 (384)
T ss_dssp HHHHHH---TTCSEEEECCCCTTSCCCCCSCHHHHTTSC-TTCEEEETT
T ss_pred HHHHHh---CCCCEEEECCccCCCCCCeeeCHHHHhcCC-CCCEEEEEe
Confidence 122221 2589999543211111112 2367788899 899887543
No 434
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=81.49 E-value=1.2 Score=39.11 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=30.1
Q ss_pred CCeEEEEcCCcchhHHHHHhcC-------CcEEEEcCCHHHHHHH
Q 024647 34 HELAWDVGTGSGQAAASLSGIF-------ENVIGTETSPKQIEFA 71 (265)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~~~~-------~~v~~vD~s~~~~~~a 71 (265)
+..++|+|+|+|.+..-+.+.. .++..||+|+.+.+.-
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q 182 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQ 182 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHH
Confidence 4689999999999988876421 2699999999887543
No 435
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=81.11 E-value=1.5 Score=38.90 Aligned_cols=71 Identities=13% Similarity=0.142 Sum_probs=44.3
Q ss_pred CCeEEEEcCCc-ch-hHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEec
Q 024647 34 HELAWDVGTGS-GQ-AAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 34 ~~~vlDvGcG~-G~-~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~ 107 (265)
.++|+=+|||. |. ++..|.+.+.+|+.+|.+++.++.+...-++..+.+++... .-+++. .-+..|++++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~-~~L~~A--gi~~ad~~ia~ 75 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHP-DVLHEA--GAQDADMLVAV 75 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCH-HHHHHH--TTTTCSEEEEC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCH-HHHHhc--CCCcCCEEEEE
Confidence 46788888875 32 22333445567999999999998876534677777665211 112222 23467888863
No 436
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=81.03 E-value=5.5 Score=32.04 Aligned_cols=87 Identities=9% Similarity=0.051 Sum_probs=52.7
Q ss_pred CeEEEEcCCc-c-hhHHHHHhcCCc-EEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccccc
Q 024647 35 ELAWDVGTGS-G-QAAASLSGIFEN-VIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMH 111 (265)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~ 111 (265)
++|.=||||. | .++..+++.+.+ |.++|.+++.++.+.+.-++... .+.++. . ...|+|+..-.-.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~--------~~~~~~-~--~~~Dvvi~av~~~ 79 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYT--------TDLAEV-N--PYAKLYIVSLKDS 79 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEE--------SCGGGS-C--SCCSEEEECCCHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCcee--------CCHHHH-h--cCCCEEEEecCHH
Confidence 5788999985 3 344456666777 89999999988766542233322 223332 1 2579999864322
Q ss_pred cCChhHHHHHHHHHhcCCCcEEEE
Q 024647 112 WFDLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 112 ~~~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
....+++++...++ +|..++-
T Consensus 80 --~~~~v~~~l~~~~~-~~~ivv~ 100 (266)
T 3d1l_A 80 --AFAELLQGIVEGKR-EEALMVH 100 (266)
T ss_dssp --HHHHHHHHHHTTCC-TTCEEEE
T ss_pred --HHHHHHHHHHhhcC-CCcEEEE
Confidence 12456666666677 6655543
No 437
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=81.02 E-value=4.6 Score=32.36 Aligned_cols=103 Identities=15% Similarity=0.075 Sum_probs=59.3
Q ss_pred CCCeEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHHc--CCCceEEecCCccchhhhhhc----cCCCCceeE
Q 024647 33 NHELAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFATK--LPNIRYELTSPAMSIAELEQN----VAAQSTVDL 103 (265)
Q Consensus 33 ~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~--~~~~~~~~~~~~~~~~d~~~~----~~~~~~~Dl 103 (265)
.++++|-.|++.| .++..|++.+++|+.+|.++..++...+ ..++.+...+.... .+++.+ ...-+.+|+
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~id~ 85 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADL-NEIAVLGAAAGQTLGAIDL 85 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCH-HHHHHHHHHHHHHHSSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCH-HHHHHHHHHHHHHhCCCCE
Confidence 3467888887765 3444566778899999999987766543 13566666555221 111111 011246899
Q ss_pred EEeccccccC------Chh--------------HHHHHHHHHhcCCCcEEEEEe
Q 024647 104 VTIAQAMHWF------DLP--------------QFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 104 v~~~~~~~~~------~~~--------------~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
++.+-.+... +.+ .+.+.+...++ .+|.++...
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~g~iv~is 138 (255)
T 4eso_A 86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIR-EGGSIVFTS 138 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE-EEEEEEEEC
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHh-cCCEEEEEC
Confidence 8876544321 111 23445555667 688877643
No 438
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=80.82 E-value=13 Score=32.60 Aligned_cols=39 Identities=13% Similarity=0.191 Sum_probs=29.0
Q ss_pred CCeEEEEcCCc-chh-HHHHHhcCCcEEEEcCCHHHHHHHHc
Q 024647 34 HELAWDVGTGS-GQA-AASLSGIFENVIGTETSPKQIEFATK 73 (265)
Q Consensus 34 ~~~vlDvGcG~-G~~-~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (265)
-++|--||+|. |.. +..|++ +.+|+++|++++.++..++
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~ 76 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQ 76 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHT
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhc
Confidence 35788899986 432 333455 7789999999999988765
No 439
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=80.60 E-value=8.9 Score=31.90 Aligned_cols=108 Identities=17% Similarity=0.146 Sum_probs=62.4
Q ss_pred CCCeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEe------cCCccchhhhhhccCCCCceeEE
Q 024647 33 NHELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATKLPNIRYEL------TSPAMSIAELEQNVAAQSTVDLV 104 (265)
Q Consensus 33 ~~~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~Dlv 104 (265)
..++|.-+|+|. | .++..|++.+.+|+.+ .+++.++..++. +..... ...... .+.+.. ..+|+|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~-g~~~~~~~~~~~~~~~~~-~~~~~~----~~~D~v 90 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEAT-GLRLETQSFDEQVKVSAS-SDPSAV----QGADLV 90 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHH-CEEEECSSCEEEECCEEE-SCGGGG----TTCSEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhC-CeEEEcCCCcEEEeeeee-CCHHHc----CCCCEE
Confidence 457899999996 3 5556677788899999 888888776541 121111 011000 122221 368999
Q ss_pred EeccccccCChhHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhh
Q 024647 105 TIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVF 151 (265)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~ 151 (265)
+..---+ +...+++++...++ ++..++....+- .....+.+.+
T Consensus 91 ilavk~~--~~~~~l~~l~~~l~-~~~~iv~~~nGi-~~~~~l~~~~ 133 (318)
T 3hwr_A 91 LFCVKST--DTQSAALAMKPALA-KSALVLSLQNGV-ENADTLRSLL 133 (318)
T ss_dssp EECCCGG--GHHHHHHHHTTTSC-TTCEEEEECSSS-SHHHHHHHHC
T ss_pred EEEcccc--cHHHHHHHHHHhcC-CCCEEEEeCCCC-CcHHHHHHHc
Confidence 9864322 44677888888888 776655433322 2124555665
No 440
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=80.43 E-value=4 Score=33.40 Aligned_cols=84 Identities=12% Similarity=0.200 Sum_probs=51.9
Q ss_pred CeEEEEcC-Cc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccccc
Q 024647 35 ELAWDVGT-GS-G-QAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMH 111 (265)
Q Consensus 35 ~~vlDvGc-G~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~ 111 (265)
++|.=||| |. | .++..|.+.+.+|+++|.++..++.+.+. ++.. .+..+. -...|+|+..-.-.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-g~~~---------~~~~~~---~~~aDvVi~av~~~ 78 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGM-GIPL---------TDGDGW---IDEADVVVLALPDN 78 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHT-TCCC---------CCSSGG---GGTCSEEEECSCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhc-CCCc---------CCHHHH---hcCCCEEEEcCCch
Confidence 47899999 86 3 44556677777899999999888776642 2211 111111 12579999764222
Q ss_pred cCChhHHHHHHHHHhcCCCcEEE
Q 024647 112 WFDLPQFYNQVKWVLKKPNGVIA 134 (265)
Q Consensus 112 ~~~~~~~l~~~~~~Lk~pgG~l~ 134 (265)
. ...+++++...++ ++..++
T Consensus 79 ~--~~~v~~~l~~~l~-~~~ivv 98 (286)
T 3c24_A 79 I--IEKVAEDIVPRVR-PGTIVL 98 (286)
T ss_dssp H--HHHHHHHHGGGSC-TTCEEE
T ss_pred H--HHHHHHHHHHhCC-CCCEEE
Confidence 1 3456666666677 666544
No 441
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=79.74 E-value=6.8 Score=32.07 Aligned_cols=102 Identities=17% Similarity=0.033 Sum_probs=62.1
Q ss_pred CCCeEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHHc--CCCceEEecCCccchhhhhhc----cCCCCceeE
Q 024647 33 NHELAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFATK--LPNIRYELTSPAMSIAELEQN----VAAQSTVDL 103 (265)
Q Consensus 33 ~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~--~~~~~~~~~~~~~~~~d~~~~----~~~~~~~Dl 103 (265)
+++++|--|++.| ..+..|++.+++|+.+|.+++.++.+.+ ..++.....++... .+++.+ ...-+..|+
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~-~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANL-AELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCH-HHHHHHHHHHHHHHSCEEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCH-HHHHHHHHHHHHHcCCCCE
Confidence 4577888888776 3455567788999999999998876543 24556666555221 112111 112257899
Q ss_pred EEeccccccC------Chh--------------HHHHHHHHHhcCCCcEEEEE
Q 024647 104 VTIAQAMHWF------DLP--------------QFYNQVKWVLKKPNGVIATW 136 (265)
Q Consensus 104 v~~~~~~~~~------~~~--------------~~l~~~~~~Lk~pgG~l~~~ 136 (265)
++.+-..... +.+ .+.+.+...|+ .+|.++..
T Consensus 107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~-~~G~IIni 158 (273)
T 4fgs_A 107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLA-RGSSVVLT 158 (273)
T ss_dssp EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEE-EEEEEEEE
T ss_pred EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHh-hCCeEEEE
Confidence 9877654322 111 24456667788 67877653
No 442
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=79.67 E-value=20 Score=27.87 Aligned_cols=74 Identities=23% Similarity=0.149 Sum_probs=43.8
Q ss_pred eEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHHc-C-CCceEEecCCccchhhhhhc-cCCCCceeEEEeccc
Q 024647 36 LAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFATK-L-PNIRYELTSPAMSIAELEQN-VAAQSTVDLVTIAQA 109 (265)
Q Consensus 36 ~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~-~~~~~~~~~~~~~~~d~~~~-~~~~~~~Dlv~~~~~ 109 (265)
++|-.|++.| .++..|++++.+|+.++.++..++.+.. . .++.+...+.... .+++.+ ..-.+.+|+++.+-.
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~d~lv~~Ag 81 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASH-QEVEQLFEQLDSIPSTVVHSAG 81 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCH-HHHHHHHHSCSSCCSEEEECCC
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCH-HHHHHHHHHHhhcCCEEEEeCC
Confidence 4677777655 2344556678899999999988876653 2 4566777655321 112221 111234588887654
Q ss_pred c
Q 024647 110 M 110 (265)
Q Consensus 110 ~ 110 (265)
.
T Consensus 82 ~ 82 (230)
T 3guy_A 82 S 82 (230)
T ss_dssp C
T ss_pred c
Confidence 3
No 443
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=79.41 E-value=6.8 Score=31.95 Aligned_cols=87 Identities=16% Similarity=0.208 Sum_probs=50.7
Q ss_pred CeEEEEcCCc-c-hhHHHHHhc--CCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecccc
Q 024647 35 ELAWDVGTGS-G-QAAASLSGI--FENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAM 110 (265)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~ 110 (265)
++|.=||||. | .++..|.+. +.+|+++|.++..++.+.+........ .+.++. -...|+|+..-.-
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~-------~~~~~~---~~~aDvVilavp~ 76 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEAT-------ADFKVF---AALADVIILAVPI 76 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEE-------SCTTTT---GGGCSEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCccccc-------CCHHHh---hcCCCEEEEcCCH
Confidence 5688899997 3 444556666 457999999998887765422111111 122211 1357999876422
Q ss_pred ccCChhHHHHHHHHH-hcCCCcEEE
Q 024647 111 HWFDLPQFYNQVKWV-LKKPNGVIA 134 (265)
Q Consensus 111 ~~~~~~~~l~~~~~~-Lk~pgG~l~ 134 (265)
+. ...+++++... |+ ++..++
T Consensus 77 ~~--~~~v~~~l~~~~l~-~~~ivi 98 (290)
T 3b1f_A 77 KK--TIDFIKILADLDLK-EDVIIT 98 (290)
T ss_dssp HH--HHHHHHHHHTSCCC-TTCEEE
T ss_pred HH--HHHHHHHHHhcCCC-CCCEEE
Confidence 21 14566666666 77 665444
No 444
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=79.02 E-value=1.9 Score=34.51 Aligned_cols=86 Identities=12% Similarity=0.172 Sum_probs=50.1
Q ss_pred CeEEEEcCCc-c-hhHHHHHhcCC----cEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 35 ELAWDVGTGS-G-QAAASLSGIFE----NVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
++|.=||||. | .++..|.+.+. +|++.|.+++.++.+.+.-++... .+.++.- ...|+|+..-
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~--------~~~~e~~---~~aDvVilav 71 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTT--------TDNNEVA---KNADILILSI 71 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEEC--------SCHHHHH---HHCSEEEECS
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEe--------CChHHHH---HhCCEEEEEe
Confidence 4678899996 3 45556677765 899999999988776531233321 1222211 2469988764
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEE
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIA 134 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~ 134 (265)
.-.....+++++...++ ||..++
T Consensus 72 --~~~~~~~v~~~l~~~l~-~~~~vv 94 (247)
T 3gt0_A 72 --KPDLYASIINEIKEIIK-NDAIIV 94 (247)
T ss_dssp --CTTTHHHHC---CCSSC-TTCEEE
T ss_pred --CHHHHHHHHHHHHhhcC-CCCEEE
Confidence 11134456667777777 666554
No 445
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=78.66 E-value=15 Score=30.63 Aligned_cols=88 Identities=14% Similarity=0.152 Sum_probs=49.7
Q ss_pred CCeEEEEcCCc-chhH-HHHH-hc-CCcEE-EEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 34 HELAWDVGTGS-GQAA-ASLS-GI-FENVI-GTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 34 ~~~vlDvGcG~-G~~~-~~l~-~~-~~~v~-~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
..+|.=||||. |... ..+. +. ..+++ .+|.++..++...+.-++.... .|.+++ +.+..+|+|+...
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~-------~~~~~~-l~~~~~D~V~i~t 79 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTY-------TNYKDM-IDTENIDAIFIVA 79 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEE-------SCHHHH-HTTSCCSEEEECS
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCccc-------CCHHHH-hcCCCCCEEEEeC
Confidence 45789999986 4433 3333 22 23554 5699998876543322332122 234444 2344689999763
Q ss_pred ccccCChhHHHHHHHHHhcCCCcEEEE
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
......+.+...|+ .|-.+++
T Consensus 80 -----p~~~h~~~~~~al~-~G~~v~~ 100 (346)
T 3cea_A 80 -----PTPFHPEMTIYAMN-AGLNVFC 100 (346)
T ss_dssp -----CGGGHHHHHHHHHH-TTCEEEE
T ss_pred -----ChHhHHHHHHHHHH-CCCEEEE
Confidence 23344566667788 6655555
No 446
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=78.58 E-value=18 Score=29.75 Aligned_cols=40 Identities=25% Similarity=0.114 Sum_probs=31.3
Q ss_pred CCeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHc
Q 024647 34 HELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATK 73 (265)
Q Consensus 34 ~~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (265)
.++|.=||+|. | .++..|++.+.+|++.|.+++.++.+.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~ 48 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLA 48 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence 36788899986 3 4555667778899999999998887765
No 447
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=78.58 E-value=10 Score=33.84 Aligned_cols=88 Identities=16% Similarity=0.126 Sum_probs=55.1
Q ss_pred CeEEEEcCCc--chhHHHHHhcCCcEEEEcCCHHHHHHHHcC-----------C------------CceEEecCCccchh
Q 024647 35 ELAWDVGTGS--GQAAASLSGIFENVIGTETSPKQIEFATKL-----------P------------NIRYELTSPAMSIA 89 (265)
Q Consensus 35 ~~vlDvGcG~--G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----------~------------~~~~~~~~~~~~~~ 89 (265)
.+|--||+|. +.++..+++.+.+|++.|.+++.++.+.+. . ++... .
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~--------~ 77 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV--------T 77 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE--------C
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe--------C
Confidence 4577889997 345666778888999999999998876431 1 11111 1
Q ss_pred hhhhccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEE
Q 024647 90 ELEQNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 90 d~~~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
+.+.+ ...|+|+.+-.-..--...+++++...++ |+.+|+.
T Consensus 78 ~~~~~----~~aDlVIeAVpe~~~vk~~v~~~l~~~~~-~~~Ilas 118 (483)
T 3mog_A 78 DIHAL----AAADLVIEAASERLEVKKALFAQLAEVCP-PQTLLTT 118 (483)
T ss_dssp CGGGG----GGCSEEEECCCCCHHHHHHHHHHHHHHSC-TTCEEEE
T ss_pred CHHHh----cCCCEEEEcCCCcHHHHHHHHHHHHHhhc-cCcEEEe
Confidence 22211 35799987621100012368888999998 7876654
No 448
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=78.51 E-value=1.7 Score=35.28 Aligned_cols=41 Identities=15% Similarity=0.158 Sum_probs=29.8
Q ss_pred CCCCceeEEEeccccccC---------------ChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 96 AAQSTVDLVTIAQAMHWF---------------DLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 96 ~~~~~~Dlv~~~~~~~~~---------------~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
++++++|+|++.-....- -....+.++.++|+ |||.++++.
T Consensus 19 l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk-~~g~i~v~~ 74 (260)
T 1g60_A 19 VENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLD-KDGSLYIFN 74 (260)
T ss_dssp SCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred ccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhc-CCeEEEEEc
Confidence 356789999987643211 12357888999999 999998864
No 449
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=78.47 E-value=5.6 Score=42.95 Aligned_cols=99 Identities=17% Similarity=0.073 Sum_probs=63.9
Q ss_pred CCCCCeEEEEcC-C-cchhHHHHHhc-CCcEEEEcCCHHHHHHHHc----CCCceEEecCCccchhhhhhccCCCCceeE
Q 024647 31 TTNHELAWDVGT-G-SGQAAASLSGI-FENVIGTETSPKQIEFATK----LPNIRYELTSPAMSIAELEQNVAAQSTVDL 103 (265)
Q Consensus 31 ~~~~~~vlDvGc-G-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~----~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dl 103 (265)
.+++.+||-.|+ | .|..+..+++. +++|++++.+++-.+.+++ +....+....-......+... .....+|+
T Consensus 1665 l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~-t~g~GvDv 1743 (2512)
T 2vz8_A 1665 MQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRH-TAGKGVDL 1743 (2512)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHT-TTSCCEEE
T ss_pred CCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHh-cCCCCceE
Confidence 357788998864 4 48888888875 6789999999988887764 222223322211000112222 13346999
Q ss_pred EEeccccccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 104 VTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 104 v~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
|+-.. . ...+....+.|+ ++|+++...
T Consensus 1744 Vld~~-----g-~~~l~~~l~~L~-~~Gr~V~iG 1770 (2512)
T 2vz8_A 1744 VLNSL-----A-EEKLQASVRCLA-QHGRFLEIG 1770 (2512)
T ss_dssp EEECC-----C-HHHHHHHHTTEE-EEEEEEECC
T ss_pred EEECC-----C-chHHHHHHHhcC-CCcEEEEee
Confidence 98642 2 567899999999 999998754
No 450
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=78.18 E-value=19 Score=28.84 Aligned_cols=65 Identities=25% Similarity=0.184 Sum_probs=45.0
Q ss_pred CeEEEEcCCcchhHHHHH----hcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecccc
Q 024647 35 ELAWDVGTGSGQAAASLS----GIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAM 110 (265)
Q Consensus 35 ~~vlDvGcG~G~~~~~l~----~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~ 110 (265)
++||-.|| |.++..++ +.+.+|++++.++.-...... .++.+...+. .++. -..+|.|+...+.
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~-------~d~~--~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-SGAEPLLWPG-------EEPS--LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-TTEEEEESSS-------SCCC--CTTCCEEEECCCC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-CCCeEEEecc-------cccc--cCCCCEEEECCCc
Confidence 57999995 77777665 456789999999887665543 5678887444 3333 3568999876544
Q ss_pred c
Q 024647 111 H 111 (265)
Q Consensus 111 ~ 111 (265)
.
T Consensus 74 ~ 74 (286)
T 3ius_A 74 D 74 (286)
T ss_dssp B
T ss_pred c
Confidence 3
No 451
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=78.10 E-value=4.4 Score=38.44 Aligned_cols=50 Identities=12% Similarity=0.024 Sum_probs=38.3
Q ss_pred CCeEEEEcCCcchhHHHHHhcC-------CcEEEEcCCHHHHHHHHc-CCCceEEecC
Q 024647 34 HELAWDVGTGSGQAAASLSGIF-------ENVIGTETSPKQIEFATK-LPNIRYELTS 83 (265)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~~~~-------~~v~~vD~s~~~~~~a~~-~~~~~~~~~~ 83 (265)
..+|||+=||-|.++..+.+.+ .-+.++|+++.+++.-+. +++....+.+
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~~~~~~~d 269 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEK 269 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTTSEEEESC
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCCCceecCc
Confidence 4679999999999999998765 347899999999986553 4555555543
No 452
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=77.57 E-value=7.2 Score=30.83 Aligned_cols=78 Identities=17% Similarity=0.176 Sum_probs=47.4
Q ss_pred CCCCeEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHHc--CCCceEEecCCccchhhhhhccCCCCceeEEEe
Q 024647 32 TNHELAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFATK--LPNIRYELTSPAMSIAELEQNVAAQSTVDLVTI 106 (265)
Q Consensus 32 ~~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~ 106 (265)
.++++||-.|++.| .++..|++.+.+|+.++.++..++...+ ..++.+...+.... .++..+-...+.+|+++.
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~id~li~ 90 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANK-EECSNLISKTSNLDILVC 90 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSH-HHHHHHHHTCSCCSEEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCH-HHHHHHHHhcCCCCEEEE
Confidence 35677888887655 3344556678899999999987776543 24566666555221 112222112246899997
Q ss_pred cccc
Q 024647 107 AQAM 110 (265)
Q Consensus 107 ~~~~ 110 (265)
+-..
T Consensus 91 ~Ag~ 94 (249)
T 3f9i_A 91 NAGI 94 (249)
T ss_dssp CCC-
T ss_pred CCCC
Confidence 6643
No 453
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=77.50 E-value=1.9 Score=36.33 Aligned_cols=42 Identities=19% Similarity=0.330 Sum_probs=31.1
Q ss_pred CCCCceeEEEeccccc-----------cC-ChhHHHHHHHHHhcCCCcEEEEEec
Q 024647 96 AAQSTVDLVTIAQAMH-----------WF-DLPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 96 ~~~~~~Dlv~~~~~~~-----------~~-~~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
++++++|+|+..-... |. -....+.++.++|+ |||.++++..
T Consensus 54 l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk-~~G~i~i~~~ 107 (319)
T 1eg2_A 54 LPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLS-PTGSIAIFGG 107 (319)
T ss_dssp SCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred CccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcC-CCeEEEEEcC
Confidence 4677999999976432 11 13467888999999 9999988654
No 454
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=77.11 E-value=7.1 Score=34.31 Aligned_cols=90 Identities=16% Similarity=0.092 Sum_probs=54.0
Q ss_pred CCCCeEEEEcCCc-chhHHHHH-hcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 32 TNHELAWDVGTGS-GQAAASLS-GIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 32 ~~~~~vlDvGcG~-G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
..+++|+-+|+|. |......+ ..+.+|+++|+++.....+.. .+... .++++. + ...|+|+....
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~-~G~~v---------~~Leea-l--~~ADIVi~atg 284 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACM-DGFRL---------VKLNEV-I--RQVDIVITCTG 284 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEE---------CCHHHH-T--TTCSEEEECSS
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHH-cCCEe---------ccHHHH-H--hcCCEEEECCC
Confidence 3678899999997 55444444 356799999999976555543 23222 123332 1 24798887421
Q ss_pred cccCChhHHH-HHHHHHhcCCCcEEEEEecCC
Q 024647 110 MHWFDLPQFY-NQVKWVLKKPNGVIATWCYTV 140 (265)
Q Consensus 110 ~~~~~~~~~l-~~~~~~Lk~pgG~l~~~~~~~ 140 (265)
...++ .+..+.+| +|++|+-....+
T Consensus 285 -----t~~lI~~e~l~~MK-~gailINvgrg~ 310 (435)
T 3gvp_A 285 -----NKNVVTREHLDRMK-NSCIVCNMGHSN 310 (435)
T ss_dssp -----CSCSBCHHHHHHSC-TTEEEEECSSTT
T ss_pred -----CcccCCHHHHHhcC-CCcEEEEecCCC
Confidence 11223 36677889 898776544333
No 455
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=76.86 E-value=20 Score=31.37 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCc-ch-hHHHHHhcCCcEEEEcCCHHHHHHHHc
Q 024647 33 NHELAWDVGTGS-GQ-AAASLSGIFENVIGTETSPKQIEFATK 73 (265)
Q Consensus 33 ~~~~vlDvGcG~-G~-~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (265)
.+.+.--+|+|. |. .+..|++.+.+|+++|++++.++..++
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~ 52 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQN 52 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHC
Confidence 445677788886 43 344567788899999999999998875
No 456
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=76.78 E-value=2.8 Score=33.83 Aligned_cols=76 Identities=17% Similarity=0.197 Sum_probs=48.4
Q ss_pred CCCeEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 33 NHELAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 33 ~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
.++++|--|++.| ..++.|++.+++|+.+|.+++.++.... .++.....++... .+++.+-..-+..|+++.+-.
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~-~~~~~~~~Dv~~~-~~v~~~~~~~g~iDiLVNNAG 87 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRH-PRIRREELDITDS-QRLQRLFEALPRLDVLVNNAG 87 (242)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCC-TTEEEEECCTTCH-HHHHHHHHHCSCCSEEEECCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhc-CCeEEEEecCCCH-HHHHHHHHhcCCCCEEEECCC
Confidence 4677888888877 3555677888999999998876554332 4566666655321 222222222357899987654
Q ss_pred c
Q 024647 110 M 110 (265)
Q Consensus 110 ~ 110 (265)
+
T Consensus 88 i 88 (242)
T 4b79_A 88 I 88 (242)
T ss_dssp C
T ss_pred C
Confidence 3
No 457
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=76.35 E-value=15 Score=29.40 Aligned_cols=52 Identities=15% Similarity=0.102 Sum_probs=32.9
Q ss_pred HHHHhhhCC--CCcHHHHHHHHhhCCCCCeEEEEcCCc-c-hhHHHHHhcCC-cEEEEcCCH
Q 024647 9 AKQYAETRP--NYPEELFKFITSKTTNHELAWDVGTGS-G-QAAASLSGIFE-NVIGTETSP 65 (265)
Q Consensus 9 a~~Y~~~rp--~y~~~l~~~l~~~~~~~~~vlDvGcG~-G-~~~~~l~~~~~-~v~~vD~s~ 65 (265)
..+|++..- .+..+-.+.|. ..+|+-+|||. | ..+..|+..+. +++.+|.+.
T Consensus 9 ~~ry~Rq~~l~~~g~~~q~~l~-----~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 9 MLRYNRQIILRGFDFDGQEALK-----DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHHTHHHHTSTTTHHHHHHHHH-----HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHhhheecccccCHHHHHHHh-----CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 456776443 35555555553 25799999984 4 33444566664 799999886
No 458
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=75.81 E-value=2.6 Score=34.79 Aligned_cols=105 Identities=11% Similarity=0.115 Sum_probs=56.0
Q ss_pred cCCcchhHHHHHhc-CCcEEEEcCCHHHHHHHHc------CCCceEEecCCccchhhhhhccCCCCceeEEEecccc---
Q 024647 41 GTGSGQAAASLSGI-FENVIGTETSPKQIEFATK------LPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAM--- 110 (265)
Q Consensus 41 GcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~------~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~--- 110 (265)
.++.|.+...+.+. +..|+.||-.-.. -.++ .+++.+.. ..|+..- ...+.+|+|+++.+-
T Consensus 149 ~~~~~~~~~~~~k~~g~~vl~v~~~~~~--p~k~v~wi~Pi~GAt~~~------~lDfg~p-~~~~k~DvV~SDMApn~s 219 (320)
T 2hwk_A 149 EHPQSDFSSFVSKLKGRTVLVVGEKLSV--PGKMVDWLSDRPEATFRA------RLDLGIP-GDVPKYDIIFVNVRTPYK 219 (320)
T ss_dssp CCCCCCCHHHHHTSSCSEEEEEESCCCC--TTSEEEEEESSTTCSEEC------CGGGCSC-TTSCCEEEEEEECCCCCC
T ss_pred ccCCCCHHHHHhhCCCcEEEEEeccccc--CCceeEeeccCCCceeec------ccccCCc-cccCcCCEEEEcCCCCCC
Confidence 45666666666664 4456666421110 0010 13333331 1344332 223569999997743
Q ss_pred -cc----CChh----HHHHHHHHHhcCCCcEEEEEecCCCC-CChHHHHhhcccc
Q 024647 111 -HW----FDLP----QFYNQVKWVLKKPNGVIATWCYTVPE-VNVSVDAVFQPFY 155 (265)
Q Consensus 111 -~~----~~~~----~~l~~~~~~Lk~pgG~l~~~~~~~~~-~~~~~~~~~~~~~ 155 (265)
|+ .|.. -++..+.++|+ |||+|++-.+.... ..+.+...+.+.+
T Consensus 220 Gh~yqQC~DHarii~Lal~fA~~vLk-PGGtfV~KvyggaDr~se~lv~~LaR~F 273 (320)
T 2hwk_A 220 YHHYQQCEDHAIKLSMLTKKACLHLN-PGGTCVSIGYGYADRASESIIGAIARQF 273 (320)
T ss_dssp SCHHHHHHHHHHHHHHTHHHHGGGEE-EEEEEEEEECCCCSHHHHHHHHHHHTTE
T ss_pred CccccccchHHHHHHHHHHHHHHhcC-CCceEEEEEecCCcccHHHHHHHHHHhc
Confidence 33 2322 25677889999 99999986665441 1345555444444
No 459
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=75.78 E-value=5.2 Score=32.95 Aligned_cols=86 Identities=15% Similarity=0.128 Sum_probs=53.9
Q ss_pred CeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecccccc
Q 024647 35 ELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHW 112 (265)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~ 112 (265)
++|.-||+|. | .++..|++.+.+|++.|.+++.++.+.+. ++... .+.++.. . .|+|+..-.-.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~~--------~~~~~~~---~-aDvvi~~vp~~- 81 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA-GATLA--------DSVADVA---A-ADLIHITVLDD- 81 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT-TCEEC--------SSHHHHT---T-SSEEEECCSSH-
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CCEEc--------CCHHHHH---h-CCEEEEECCCh-
Confidence 5688999986 4 35556677778999999999887776642 33321 2334331 2 79988752200
Q ss_pred CChhHHHHHHHHHhcCCCcEEEE
Q 024647 113 FDLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 113 ~~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
.....+++.+...++ +|.+++-
T Consensus 82 ~~~~~v~~~l~~~l~-~g~ivv~ 103 (296)
T 3qha_A 82 AQVREVVGELAGHAK-PGTVIAI 103 (296)
T ss_dssp HHHHHHHHHHHTTCC-TTCEEEE
T ss_pred HHHHHHHHHHHHhcC-CCCEEEE
Confidence 012346677777788 7766553
No 460
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=75.64 E-value=14 Score=30.52 Aligned_cols=91 Identities=15% Similarity=0.004 Sum_probs=54.2
Q ss_pred CeEEEEcCCc--chhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEec-------CCccchhhhhhccCCCCceeEEE
Q 024647 35 ELAWDVGTGS--GQAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELT-------SPAMSIAELEQNVAAQSTVDLVT 105 (265)
Q Consensus 35 ~~vlDvGcG~--G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-------~~~~~~~d~~~~~~~~~~~Dlv~ 105 (265)
++|.=+|+|. +.++..|++.+.+|+.++.++ .+..++ .++..... +.... .+.+.. ..+|+|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~-~g~~~~~~~g~~~~~~~~~~-~~~~~~----~~~D~vi 74 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAG-NGLKVFSINGDFTLPHVKGY-RAPEEI----GPMDLVL 74 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHH-TCEEEEETTCCEEESCCCEE-SCHHHH----CCCSEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHh-CCCEEEcCCCeEEEeeceee-cCHHHc----CCCCEEE
Confidence 4688899997 355566777788999999987 354443 22322211 11100 122222 3689999
Q ss_pred eccccccCChhHHHHHHHHHhcCCCcEEEEE
Q 024647 106 IAQAMHWFDLPQFYNQVKWVLKKPNGVIATW 136 (265)
Q Consensus 106 ~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~ 136 (265)
..---+ +...+++.+...++ ++..++..
T Consensus 75 lavk~~--~~~~~l~~l~~~l~-~~~~iv~l 102 (312)
T 3hn2_A 75 VGLKTF--ANSRYEELIRPLVE-EGTQILTL 102 (312)
T ss_dssp ECCCGG--GGGGHHHHHGGGCC-TTCEEEEC
T ss_pred EecCCC--CcHHHHHHHHhhcC-CCCEEEEe
Confidence 864222 23468888888898 78766543
No 461
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=75.46 E-value=14 Score=28.76 Aligned_cols=70 Identities=13% Similarity=0.092 Sum_probs=44.6
Q ss_pred CCCeEEEEcCCcchhHHH----HHhcCCcEEEEcCCHHHHHHHHcCCCc-eEEecCCccchhhhhhccCCCCceeEEEec
Q 024647 33 NHELAWDVGTGSGQAAAS----LSGIFENVIGTETSPKQIEFATKLPNI-RYELTSPAMSIAELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~----l~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~ 107 (265)
.+++||-.|+ +|.++.. |++.+.+|++++.++..++.... .++ .+...+.. .++.+. -+.+|.|+.+
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-~~~~~~~~~Dl~---~~~~~~---~~~~D~vi~~ 91 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-RGASDIVVANLE---EDFSHA---FASIDAVVFA 91 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-TTCSEEEECCTT---SCCGGG---GTTCSEEEEC
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-CCCceEEEcccH---HHHHHH---HcCCCEEEEC
Confidence 3577888875 4545544 44567889999999887766554 467 77776553 122221 2368999976
Q ss_pred ccc
Q 024647 108 QAM 110 (265)
Q Consensus 108 ~~~ 110 (265)
...
T Consensus 92 ag~ 94 (236)
T 3e8x_A 92 AGS 94 (236)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 462
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=75.22 E-value=6.8 Score=32.56 Aligned_cols=93 Identities=13% Similarity=0.102 Sum_probs=53.1
Q ss_pred eEEEEcCCc-c-hhHHHHHhcCCcEEEEcC--CHHHHHHHHcCC-CceE--EecCCccch-hhhhhccCCCCceeEEEec
Q 024647 36 LAWDVGTGS-G-QAAASLSGIFENVIGTET--SPKQIEFATKLP-NIRY--ELTSPAMSI-AELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 36 ~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~--s~~~~~~a~~~~-~~~~--~~~~~~~~~-~d~~~~~~~~~~~Dlv~~~ 107 (265)
+|.=||+|. | .++..|++.+.+|+++|. +++.++..++.. ++.. ......... .+..+. -...|+|+..
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~D~vi~~ 78 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKC---LENAEVVLLG 78 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHH---HTTCSEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHH---HhcCCEEEEc
Confidence 577889986 3 444556777889999999 988887766421 1100 000000000 022221 1357999986
Q ss_pred cccccCChhHHHHHHHHHhcCCCcEEEE
Q 024647 108 QAMHWFDLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 108 ~~~~~~~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
-.-+ ....++..+.. |+ ++..++.
T Consensus 79 v~~~--~~~~v~~~i~~-l~-~~~~vv~ 102 (335)
T 1txg_A 79 VSTD--GVLPVMSRILP-YL-KDQYIVL 102 (335)
T ss_dssp SCGG--GHHHHHHHHTT-TC-CSCEEEE
T ss_pred CChH--HHHHHHHHHhc-CC-CCCEEEE
Confidence 4322 34567777777 88 7766554
No 463
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=75.09 E-value=10 Score=30.71 Aligned_cols=77 Identities=14% Similarity=0.076 Sum_probs=46.1
Q ss_pred CCCeEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHHc--CCCceEEecCCccchhhhhhc----cCCCCceeE
Q 024647 33 NHELAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFATK--LPNIRYELTSPAMSIAELEQN----VAAQSTVDL 103 (265)
Q Consensus 33 ~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~--~~~~~~~~~~~~~~~~d~~~~----~~~~~~~Dl 103 (265)
.++++|-.|++.| .++..|++.+++|+.+|.++..++.... ..++.+...++... .+++.+ ...-+.+|+
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD~ 104 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSA-KDAESMVEKTTAKWGRVDV 104 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHHcCCCCE
Confidence 4567888887765 3444566778899999999887765432 24566666555221 111111 011136899
Q ss_pred EEecccc
Q 024647 104 VTIAQAM 110 (265)
Q Consensus 104 v~~~~~~ 110 (265)
++.+-.+
T Consensus 105 lv~nAg~ 111 (277)
T 4dqx_A 105 LVNNAGF 111 (277)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9876654
No 464
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=75.08 E-value=15 Score=32.60 Aligned_cols=88 Identities=10% Similarity=0.101 Sum_probs=52.8
Q ss_pred CeEEEEcCCc--chhHHHHHhcCCcEEEEcCCHHHH--------HHHHcC------------CCceEEecCCccchhhhh
Q 024647 35 ELAWDVGTGS--GQAAASLSGIFENVIGTETSPKQI--------EFATKL------------PNIRYELTSPAMSIAELE 92 (265)
Q Consensus 35 ~~vlDvGcG~--G~~~~~l~~~~~~v~~vD~s~~~~--------~~a~~~------------~~~~~~~~~~~~~~~d~~ 92 (265)
.+|--||+|+ +.++..+++.+.+|++.|++++.. +.+.+. .++.+. .|++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t--------~dl~ 126 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKIT--------SDFH 126 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEE--------SCGG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEe--------CCHH
Confidence 5788999997 355666778888999999999821 111111 112221 2222
Q ss_pred hccCCCCceeEEEeccccccCChhHHHHHHHHHhcCCCcEEEE
Q 024647 93 QNVAAQSTVDLVTIAQAMHWFDLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 93 ~~~~~~~~~Dlv~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
. -...|+|+.+-.-..--...+++++...++ |+.+|+.
T Consensus 127 a----l~~aDlVIeAVpe~~~vk~~v~~~l~~~~~-~~aIlas 164 (460)
T 3k6j_A 127 K----LSNCDLIVESVIEDMKLKKELFANLENICK-STCIFGT 164 (460)
T ss_dssp G----CTTCSEEEECCCSCHHHHHHHHHHHHTTSC-TTCEEEE
T ss_pred H----HccCCEEEEcCCCCHHHHHHHHHHHHhhCC-CCCEEEe
Confidence 2 235799997632100012357888888898 7877754
No 465
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=74.57 E-value=19 Score=29.31 Aligned_cols=103 Identities=11% Similarity=-0.014 Sum_probs=60.1
Q ss_pred CCCeEEEEcCCcc-----hhHHHHHhcCCcEEEEcCCHHHHHHHHc----CCCceEEecCCccchhhhhhc----cCCCC
Q 024647 33 NHELAWDVGTGSG-----QAAASLSGIFENVIGTETSPKQIEFATK----LPNIRYELTSPAMSIAELEQN----VAAQS 99 (265)
Q Consensus 33 ~~~~vlDvGcG~G-----~~~~~l~~~~~~v~~vD~s~~~~~~a~~----~~~~~~~~~~~~~~~~d~~~~----~~~~~ 99 (265)
.++++|-.|++.| .++..|++.+++|+.++.++...+.++. ..++.+...++... .+++.+ ...-+
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g 108 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADA-ASIDAVFETLEKKWG 108 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCH-HHHHHHHHHHHHHTS
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCH-HHHHHHHHHHHHhcC
Confidence 4567888887633 3455667788899999998754443322 24566777655221 111111 11124
Q ss_pred ceeEEEecccccc----------CCh--------------hHHHHHHHHHhcCCCcEEEEEe
Q 024647 100 TVDLVTIAQAMHW----------FDL--------------PQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 100 ~~Dlv~~~~~~~~----------~~~--------------~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
.+|+++.+-.+.. .+. ..+.+.+...++ .+|.++...
T Consensus 109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-~~g~Iv~is 169 (293)
T 3grk_A 109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMA-DGGSILTLT 169 (293)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTT-TCEEEEEEE
T ss_pred CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCEEEEEe
Confidence 7899997765431 111 134556677788 788887644
No 466
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=74.53 E-value=12 Score=30.83 Aligned_cols=77 Identities=14% Similarity=0.070 Sum_probs=47.1
Q ss_pred CCCeEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHHc-----CCCceEEecCCccchhhhhhc----cCCCCc
Q 024647 33 NHELAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFATK-----LPNIRYELTSPAMSIAELEQN----VAAQST 100 (265)
Q Consensus 33 ~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~-----~~~~~~~~~~~~~~~~d~~~~----~~~~~~ 100 (265)
.++++|-.|++.| .++..|++++.+|++++.++..++.+.. ..++.+...++... .+++.+ ....+.
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHL-DEMVRLADEAFRLLGG 108 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHhCCC
Confidence 4467888888765 3445566778899999999887765432 24667777665321 111111 001136
Q ss_pred eeEEEecccc
Q 024647 101 VDLVTIAQAM 110 (265)
Q Consensus 101 ~Dlv~~~~~~ 110 (265)
+|+++.+-.+
T Consensus 109 id~lvnnAg~ 118 (301)
T 3tjr_A 109 VDVVFSNAGI 118 (301)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 8999977654
No 467
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=74.49 E-value=18 Score=30.05 Aligned_cols=89 Identities=16% Similarity=0.080 Sum_probs=53.2
Q ss_pred CCCeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecccc
Q 024647 33 NHELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAM 110 (265)
Q Consensus 33 ~~~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~ 110 (265)
..++|.=||+|. | .++..|++.+.+|++.|.+++.++.+.+. ++.... +.++.. ...|+|+..-.-
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~-g~~~~~--------~~~e~~---~~aDvVi~~vp~ 97 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAAL-GATIHE--------QARAAA---RDADIVVSMLEN 97 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-TCEEES--------SHHHHH---TTCSEEEECCSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC-CCEeeC--------CHHHHH---hcCCEEEEECCC
Confidence 346899999996 4 34555677788999999999988877653 443322 223221 246888875321
Q ss_pred ccCChhHHHH--HHHHHhcCCCcEEEE
Q 024647 111 HWFDLPQFYN--QVKWVLKKPNGVIAT 135 (265)
Q Consensus 111 ~~~~~~~~l~--~~~~~Lk~pgG~l~~ 135 (265)
. .....++. .+...++ +|.+++-
T Consensus 98 ~-~~~~~v~~~~~~~~~l~-~~~~vi~ 122 (320)
T 4dll_A 98 G-AVVQDVLFAQGVAAAMK-PGSLFLD 122 (320)
T ss_dssp H-HHHHHHHTTTCHHHHCC-TTCEEEE
T ss_pred H-HHHHHHHcchhHHhhCC-CCCEEEe
Confidence 0 01123333 4555677 6766554
No 468
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=74.36 E-value=5.2 Score=33.95 Aligned_cols=87 Identities=21% Similarity=0.240 Sum_probs=53.1
Q ss_pred CCeEEEEcCCc--chhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccC-CCCceeEEEecccc
Q 024647 34 HELAWDVGTGS--GQAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVA-AQSTVDLVTIAQAM 110 (265)
Q Consensus 34 ~~~vlDvGcG~--G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~Dlv~~~~~~ 110 (265)
.++|.=||+|. |.++..|.+.+.+|++.|.++..++.+.+. ++... .+.++.-. .....|+|+..-..
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~-G~~~~--------~~~~e~~~~a~~~aDlVilavP~ 78 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDE-GFDVS--------ADLEATLQRAAAEDALIVLAVPM 78 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHT-TCCEE--------SCHHHHHHHHHHTTCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCeee--------CCHHHHHHhcccCCCEEEEeCCH
Confidence 45688999986 456667777888999999999988887753 33221 12221100 01135899876432
Q ss_pred ccCChhHHHHHHHHHhcCCCcEE
Q 024647 111 HWFDLPQFYNQVKWVLKKPNGVI 133 (265)
Q Consensus 111 ~~~~~~~~l~~~~~~Lk~pgG~l 133 (265)
. ....+++++... + ||.++
T Consensus 79 ~--~~~~vl~~l~~~-~-~~~iv 97 (341)
T 3ktd_A 79 T--AIDSLLDAVHTH-A-PNNGF 97 (341)
T ss_dssp H--HHHHHHHHHHHH-C-TTCCE
T ss_pred H--HHHHHHHHHHcc-C-CCCEE
Confidence 2 223566666664 7 77544
No 469
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=74.32 E-value=16 Score=29.86 Aligned_cols=39 Identities=13% Similarity=-0.025 Sum_probs=30.7
Q ss_pred CeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHc
Q 024647 35 ELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATK 73 (265)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (265)
++|.=||||. | .++..|++.+.+|+++|.+++.++.+.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~ 44 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA 44 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH
Confidence 4688899996 3 4555677778899999999998887765
No 470
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=74.00 E-value=16 Score=29.65 Aligned_cols=77 Identities=17% Similarity=0.091 Sum_probs=46.0
Q ss_pred CCCeEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHHc--CCCceEEecCCccchhhhhh----ccCCCCceeE
Q 024647 33 NHELAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFATK--LPNIRYELTSPAMSIAELEQ----NVAAQSTVDL 103 (265)
Q Consensus 33 ~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~--~~~~~~~~~~~~~~~~d~~~----~~~~~~~~Dl 103 (265)
.++++|-.|++.| .++..|++.+++|+.+|.++..++.+.. ..++.+...++... .+++. ....-+.+|+
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDE-QQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCH-HHHHHHHHHHHHHHSSCCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCH-HHHHHHHHHHHHHcCCCCE
Confidence 3467787787665 3445566778899999999887765432 24566676555221 11111 1011236899
Q ss_pred EEecccc
Q 024647 104 VTIAQAM 110 (265)
Q Consensus 104 v~~~~~~ 110 (265)
++.+-.+
T Consensus 107 lvnnAg~ 113 (277)
T 3gvc_A 107 LVANAGV 113 (277)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9976644
No 471
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=73.79 E-value=15 Score=29.58 Aligned_cols=103 Identities=15% Similarity=0.065 Sum_probs=56.8
Q ss_pred CCCeEEEEcCCcc---hhHHHHHhcCCcEEEEcCC------------HHHHHHHHc-----CCCceEEecCCccchhhhh
Q 024647 33 NHELAWDVGTGSG---QAAASLSGIFENVIGTETS------------PKQIEFATK-----LPNIRYELTSPAMSIAELE 92 (265)
Q Consensus 33 ~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s------------~~~~~~a~~-----~~~~~~~~~~~~~~~~d~~ 92 (265)
.++++|--|++.| .++..|++.+++|+.+|.+ ...++.+.. ..++.+...++... .++.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~ 87 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR-AAVS 87 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH-HHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH-HHHH
Confidence 3467888887765 3445566778899999987 444443321 24566777655221 1111
Q ss_pred h----ccCCCCceeEEEecccccc----CChh--------------HHHHHHHHHhcCCCcEEEEEe
Q 024647 93 Q----NVAAQSTVDLVTIAQAMHW----FDLP--------------QFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 93 ~----~~~~~~~~Dlv~~~~~~~~----~~~~--------------~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
. ....-+.+|+++.+-.+.. .+.+ .+.+.+...++ .+|.++...
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~g~iv~is 153 (287)
T 3pxx_A 88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLT-SGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC-TTCEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh-cCcEEEEec
Confidence 1 1001136899987664421 1111 23445566667 688877543
No 472
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=73.67 E-value=40 Score=29.94 Aligned_cols=42 Identities=24% Similarity=0.293 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCCc-c-hhHHHHHhc-CC-cEEEEcCCHH----HHHHHHc
Q 024647 32 TNHELAWDVGTGS-G-QAAASLSGI-FE-NVIGTETSPK----QIEFATK 73 (265)
Q Consensus 32 ~~~~~vlDvGcG~-G-~~~~~l~~~-~~-~v~~vD~s~~----~~~~a~~ 73 (265)
.+-++|--||+|. | .++..|++. +. +|+++|++++ .++..++
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~ 65 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNR 65 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHh
Confidence 4457899999997 3 334456788 88 9999999999 7777654
No 473
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=73.30 E-value=20 Score=31.87 Aligned_cols=39 Identities=18% Similarity=0.131 Sum_probs=30.4
Q ss_pred CeEEEEcCCc-c-hhHHHHHhc--CCcEEEEcCCHHHHHHHHc
Q 024647 35 ELAWDVGTGS-G-QAAASLSGI--FENVIGTETSPKQIEFATK 73 (265)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~--~~~v~~vD~s~~~~~~a~~ 73 (265)
++|.-||+|. | .++..|++. +.+|+++|++++.++..++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~ 52 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNS 52 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHC
Confidence 5789999997 4 344556777 5689999999999888764
No 474
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=72.87 E-value=6.6 Score=31.11 Aligned_cols=76 Identities=14% Similarity=0.187 Sum_probs=44.4
Q ss_pred CCeEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecccc
Q 024647 34 HELAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAM 110 (265)
Q Consensus 34 ~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~ 110 (265)
++++|-.|++.| .++..|++.+.+|++++.++..++...+..++.+...+.... .+++.....-+.+|+++.+-..
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~id~lv~~Ag~ 84 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKK-KQIDQFANEVERLDVLFNVAGF 84 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCH-HHHHHHHHHCSCCSEEEECCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCH-HHHHHHHHHhCCCCEEEECCcc
Confidence 456777776554 334445667889999999987665544334666777655221 1122111112468999876543
No 475
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=72.77 E-value=19 Score=28.12 Aligned_cols=76 Identities=16% Similarity=0.120 Sum_probs=44.5
Q ss_pred CCCeEEEEcCCcchhHHH----HHhcCCcEEEEcCCHHHHHHHH-cCCCceEEecCCccchhhhhhccCCCCceeEEEec
Q 024647 33 NHELAWDVGTGSGQAAAS----LSGIFENVIGTETSPKQIEFAT-KLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~----l~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~ 107 (265)
+++++|-.|++ |.++.. |++.+.+|++++.++..++... ...++.+...+.... .+++..-..-+.+|+|+.+
T Consensus 6 ~~~~vlVTGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~id~vi~~ 83 (244)
T 1cyd_A 6 SGLRALVTGAG-KGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW-DATEKALGGIGPVDLLVNN 83 (244)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHTTCCCCSEEEEC
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCH-HHHHHHHHHcCCCCEEEEC
Confidence 34677877765 444444 4566788999999987665443 234566666554221 1222221123468999976
Q ss_pred ccc
Q 024647 108 QAM 110 (265)
Q Consensus 108 ~~~ 110 (265)
-..
T Consensus 84 Ag~ 86 (244)
T 1cyd_A 84 AAL 86 (244)
T ss_dssp CCC
T ss_pred Ccc
Confidence 643
No 476
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=72.33 E-value=6.6 Score=32.31 Aligned_cols=77 Identities=13% Similarity=0.107 Sum_probs=42.6
Q ss_pred CCCeEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHHc----C-C---CceEEecCCccchhhhhhcc----CC
Q 024647 33 NHELAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFATK----L-P---NIRYELTSPAMSIAELEQNV----AA 97 (265)
Q Consensus 33 ~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~----~-~---~~~~~~~~~~~~~~d~~~~~----~~ 97 (265)
.++++|-.|++.| .++..|++.+.+|++++.++..++.... . . ++.+...++... .+++.+- ..
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEA-SGQDDIINTTLAK 103 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCH-HHHHHHHHHHHHh
Confidence 3456777776554 2334455678899999999876654321 1 1 466666555211 1111110 01
Q ss_pred CCceeEEEecccc
Q 024647 98 QSTVDLVTIAQAM 110 (265)
Q Consensus 98 ~~~~Dlv~~~~~~ 110 (265)
-+.+|+++.+-.+
T Consensus 104 ~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 104 FGKIDILVNNAGA 116 (297)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1368999876643
No 477
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=72.11 E-value=25 Score=28.29 Aligned_cols=78 Identities=13% Similarity=0.042 Sum_probs=47.2
Q ss_pred CCCeEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHHc-----CCCceEEecCCccchhhh----hhccCCCCc
Q 024647 33 NHELAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFATK-----LPNIRYELTSPAMSIAEL----EQNVAAQST 100 (265)
Q Consensus 33 ~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~-----~~~~~~~~~~~~~~~~d~----~~~~~~~~~ 100 (265)
+++++|--|++.| ..+..|++.+++|+.+|.+++.++...+ ..++.....++... .++ +.....-+.
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~-~~v~~~~~~~~~~~G~ 86 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDE-LAIEAAFSKLDAEGIH 86 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCH-HHHHHHHHHHHHTTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCH-HHHHHHHHHHHHHCCC
Confidence 4566777777766 3445566788999999999987765432 23455555444221 111 112123467
Q ss_pred eeEEEeccccc
Q 024647 101 VDLVTIAQAMH 111 (265)
Q Consensus 101 ~Dlv~~~~~~~ 111 (265)
.|+++.+-.+.
T Consensus 87 iDiLVNNAG~~ 97 (255)
T 4g81_D 87 VDILINNAGIQ 97 (255)
T ss_dssp CCEEEECCCCC
T ss_pred CcEEEECCCCC
Confidence 99999876544
No 478
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=71.72 E-value=24 Score=30.09 Aligned_cols=106 Identities=10% Similarity=0.020 Sum_probs=60.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCcEEEE-cCCHHHHHHHHc------CC--CceEEecCCccchhhhhhccCCCCceeE
Q 024647 33 NHELAWDVGTGSGQAAASLSGIFENVIGT-ETSPKQIEFATK------LP--NIRYELTSPAMSIAELEQNVAAQSTVDL 103 (265)
Q Consensus 33 ~~~~vlDvGcG~G~~~~~l~~~~~~v~~v-D~s~~~~~~a~~------~~--~~~~~~~~~~~~~~d~~~~~~~~~~~Dl 103 (265)
.+.+||.++.+.|.++..++.. .++.+ | |--.....+. .+ ++++.. .+......+|+
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~--~~~~~~d-s~~~~~~~~~n~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 103 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH--KPYSIGD-SYISELATRENLRLNGIDESSVKFLD-----------STADYPQQPGV 103 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG--CCEEEES-CHHHHHHHHHHHHHTTCCGGGSEEEE-----------TTSCCCSSCSE
T ss_pred CCCCEEEECCCCCHHHHhhccC--CceEEEh-HHHHHHHHHHHHHHcCCCccceEecc-----------cccccccCCCE
Confidence 4467999999999999999865 34444 4 2221111111 11 234433 12223467999
Q ss_pred EEeccccccCChhHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhhccc
Q 024647 104 VTIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVFQPF 154 (265)
Q Consensus 104 v~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~~~~ 154 (265)
|+....-+--.....+..+...|+ ||+.+++..-.... .....+.+.+.
T Consensus 104 v~~~lpk~~~~l~~~L~~l~~~l~-~~~~i~~~g~~~~~-~~~~~~~l~~~ 152 (375)
T 4dcm_A 104 VLIKVPKTLALLEQQLRALRKVVT-SDTRIIAGAKARDI-HTSTLELFEKV 152 (375)
T ss_dssp EEEECCSCHHHHHHHHHHHHTTCC-TTSEEEEEEEGGGC-CHHHHHHHHHH
T ss_pred EEEEcCCCHHHHHHHHHHHHhhCC-CCCEEEEEecccch-HHHHHHHHHhh
Confidence 998643222233457788888999 89998765543222 24444444433
No 479
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=71.38 E-value=16 Score=29.70 Aligned_cols=77 Identities=14% Similarity=0.074 Sum_probs=47.0
Q ss_pred CCCeEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHHcC--CCceEEecCCccchhhhhhccCCCCceeEEEec
Q 024647 33 NHELAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFATKL--PNIRYELTSPAMSIAELEQNVAAQSTVDLVTIA 107 (265)
Q Consensus 33 ~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~ 107 (265)
.++++|-.|++.| .++..|++++.+|++++.++.-.+.+... .++.+...+.... .++..+-..-+.+|+++.+
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~iD~lv~n 93 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDL-SSVRRFADGVSGADVLINN 93 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCH-HHHHHHHHTCCCEEEEEEC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCH-HHHHHHHHhcCCCCEEEEC
Confidence 3467887887654 33444566788999999999888766542 3566666555221 1122221112578999976
Q ss_pred ccc
Q 024647 108 QAM 110 (265)
Q Consensus 108 ~~~ 110 (265)
-.+
T Consensus 94 Ag~ 96 (291)
T 3rd5_A 94 AGI 96 (291)
T ss_dssp CCC
T ss_pred CcC
Confidence 644
No 480
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=71.13 E-value=21 Score=30.87 Aligned_cols=37 Identities=19% Similarity=0.174 Sum_probs=27.6
Q ss_pred eEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHc
Q 024647 36 LAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATK 73 (265)
Q Consensus 36 ~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (265)
+|.-||+|. | .++..|++ +.+|+++|.++..++..++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~ 40 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINN 40 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHc
Confidence 577789986 3 33444566 7789999999998887764
No 481
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=71.09 E-value=22 Score=27.74 Aligned_cols=77 Identities=16% Similarity=0.182 Sum_probs=44.6
Q ss_pred CCCeEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHH-cCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 33 NHELAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFAT-KLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 33 ~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
+++++|-.|++.| .++..|++.+.+|++++.++..++... +..++.+...+.... .+++..-..-+.+|+|+.+-
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~id~vi~~A 84 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW-EATERALGSVGPVDLLVNNA 84 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHTTCCCCCEEEECC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCH-HHHHHHHHHcCCCCEEEECC
Confidence 3467787777544 233345567789999999987766443 234566666554221 12222211224689999765
Q ss_pred cc
Q 024647 109 AM 110 (265)
Q Consensus 109 ~~ 110 (265)
..
T Consensus 85 g~ 86 (244)
T 3d3w_A 85 AV 86 (244)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 482
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=70.99 E-value=18 Score=31.80 Aligned_cols=40 Identities=23% Similarity=0.315 Sum_probs=30.4
Q ss_pred CCeEEEEcCCc-ch-hHHHHHhcCCcEEEEcCCHHHHHHHHc
Q 024647 34 HELAWDVGTGS-GQ-AAASLSGIFENVIGTETSPKQIEFATK 73 (265)
Q Consensus 34 ~~~vlDvGcG~-G~-~~~~l~~~~~~v~~vD~s~~~~~~a~~ 73 (265)
.-++-=||+|. |. ++..|++.+.+|+++|++++.++..++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~ 49 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQ 49 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhc
Confidence 35677888886 43 344567778899999999999888765
No 483
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=70.95 E-value=18 Score=30.03 Aligned_cols=106 Identities=16% Similarity=0.074 Sum_probs=60.1
Q ss_pred CeEEEEcCCc--chhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEe--------cCCccchhhhhhccCCCCceeEE
Q 024647 35 ELAWDVGTGS--GQAAASLSGIFENVIGTETSPKQIEFATKLPNIRYEL--------TSPAMSIAELEQNVAAQSTVDLV 104 (265)
Q Consensus 35 ~~vlDvGcG~--G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~Dlv 104 (265)
++|.=+|+|. +.++..|++.+.+|+.++.++. +..++ .++.... .+.... .+.+.. ...+|+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~--~~i~~-~Gl~~~~~~~g~~~~~~~~~~-~~~~~~---~~~~DlV 75 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDY--ETVKA-KGIRIRSATLGDYTFRPAAVV-RSAAEL---ETKPDCT 75 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTH--HHHHH-HCEEEEETTTCCEEECCSCEE-SCGGGC---SSCCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChH--HHHHh-CCcEEeecCCCcEEEeeeeeE-CCHHHc---CCCCCEE
Confidence 5688899996 3556667777889999999872 44332 1121111 011100 122222 2368999
Q ss_pred EeccccccCChhHHHHHHHHHhcCCCcEEEEEecCCCCCChHHHHhh
Q 024647 105 TIAQAMHWFDLPQFYNQVKWVLKKPNGVIATWCYTVPEVNVSVDAVF 151 (265)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~~~~~~~~~~~~~~~~~ 151 (265)
+..---+ +...+++.+...++ ++..++....+-.. .+.+.+.+
T Consensus 76 ilavK~~--~~~~~l~~l~~~l~-~~t~Iv~~~nGi~~-~~~l~~~~ 118 (320)
T 3i83_A 76 LLCIKVV--EGADRVGLLRDAVA-PDTGIVLISNGIDI-EPEVAAAF 118 (320)
T ss_dssp EECCCCC--TTCCHHHHHTTSCC-TTCEEEEECSSSSC-SHHHHHHS
T ss_pred EEecCCC--ChHHHHHHHHhhcC-CCCEEEEeCCCCCh-HHHHHHHC
Confidence 9865332 23467888888888 78766654433222 35555554
No 484
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=70.27 E-value=27 Score=27.84 Aligned_cols=77 Identities=14% Similarity=0.129 Sum_probs=43.7
Q ss_pred CCCeEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHHc-----C--CCceEEecCCccchhhhhhccCCCCcee
Q 024647 33 NHELAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFATK-----L--PNIRYELTSPAMSIAELEQNVAAQSTVD 102 (265)
Q Consensus 33 ~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~-----~--~~~~~~~~~~~~~~~d~~~~~~~~~~~D 102 (265)
.++++|-.|++.| .++..|++.+++|+.+|.++.-++.... . ..+.+...+.... .+++.+-..-+.+|
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE-QGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSH-HHHHHHHHHCCCCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCH-HHHHHHHHhcCCCC
Confidence 3467787777655 3344556678899999999877654321 1 2344555444221 11222211224689
Q ss_pred EEEecccc
Q 024647 103 LVTIAQAM 110 (265)
Q Consensus 103 lv~~~~~~ 110 (265)
+++.+-..
T Consensus 88 ~lv~nAg~ 95 (267)
T 3t4x_A 88 ILINNLGI 95 (267)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99876644
No 485
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=70.12 E-value=5.7 Score=33.40 Aligned_cols=100 Identities=15% Similarity=0.042 Sum_probs=56.2
Q ss_pred CCCeEEEEcCCcc--hhHHHHHhcCCcEEEEcCCHHHHHHHHcC-----------CCceEEecCCccc------hhhhhh
Q 024647 33 NHELAWDVGTGSG--QAAASLSGIFENVIGTETSPKQIEFATKL-----------PNIRYELTSPAMS------IAELEQ 93 (265)
Q Consensus 33 ~~~~vlDvGcG~G--~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~~~~------~~d~~~ 93 (265)
...+|--||+|+- .++..++..+.+|+..|++++.++.+... ....- ....+-. ..|+++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~-~~~~~~~l~~i~~~~~l~~ 83 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKG-SLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCS-SSCHHHHHHTEEEECCHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCC-ccCHHHHHhhcccccchHh
Confidence 3467999999973 44555677888999999999988766431 00000 0000000 011111
Q ss_pred ccCCCCceeEEEeccccccCC-hhHHHHHHHHHhcCCCcEEEEEec
Q 024647 94 NVAAQSTVDLVTIAQAMHWFD-LPQFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 94 ~~~~~~~~Dlv~~~~~~~~~~-~~~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
. -...|+|+-+-. --++ ..++++++.++++ |+.+|+-.+.
T Consensus 84 a---~~~ad~ViEav~-E~l~iK~~lf~~l~~~~~-~~aIlaSNTS 124 (319)
T 3ado_A 84 A---VEGVVHIQECVP-ENLDLKRKIFAQLDSIVD-DRVVLSSSSS 124 (319)
T ss_dssp H---TTTEEEEEECCC-SCHHHHHHHHHHHHTTCC-SSSEEEECCS
T ss_pred H---hccCcEEeeccc-cHHHHHHHHHHHHHHHhh-hcceeehhhh
Confidence 1 134777775411 1112 3468999999998 8877765443
No 486
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=69.93 E-value=4.3 Score=33.64 Aligned_cols=48 Identities=10% Similarity=0.064 Sum_probs=33.7
Q ss_pred CCeEEEEcCCcchhHHHHHhcCC------cEEEEcCCHHHHHHHHcCCCceEEec
Q 024647 34 HELAWDVGTGSGQAAASLSGIFE------NVIGTETSPKQIEFATKLPNIRYELT 82 (265)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~~~~~------~v~~vD~s~~~~~~a~~~~~~~~~~~ 82 (265)
+..|+=+|||+|.....|+++++ +.+.+|+.+. ....+..+|+.....
T Consensus 61 ~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~-~~~l~~~~NV~li~~ 114 (307)
T 3mag_A 61 GATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHH-DPILNGLRDVTLVTR 114 (307)
T ss_dssp TCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCC-CGGGTTCTTEEEEEC
T ss_pred CcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcc-hhhhcCCCcEEEEec
Confidence 56899999999999999987654 4789998554 222333355555543
No 487
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=69.77 E-value=15 Score=29.13 Aligned_cols=77 Identities=19% Similarity=0.136 Sum_probs=44.8
Q ss_pred CCCeEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHHc--CCCceEEecCCccchhhhhhc----cCCCCceeE
Q 024647 33 NHELAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFATK--LPNIRYELTSPAMSIAELEQN----VAAQSTVDL 103 (265)
Q Consensus 33 ~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~--~~~~~~~~~~~~~~~~d~~~~----~~~~~~~Dl 103 (265)
.++++|-.|++.| .++..|++.+++|++++.++..++.... ..+..+...+.... .+++.+ ...-+.+|+
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD~ 86 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNP-ESIEAVLKAITDEFGGVDI 86 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCH-HHHHHHHHHHHHHHCCCSE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCH-HHHHHHHHHHHHHcCCCCE
Confidence 3467787887665 3445566778899999999887765432 13445555554211 111111 011146899
Q ss_pred EEecccc
Q 024647 104 VTIAQAM 110 (265)
Q Consensus 104 v~~~~~~ 110 (265)
++.+-.+
T Consensus 87 lv~nAg~ 93 (248)
T 3op4_A 87 LVNNAGI 93 (248)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9877654
No 488
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=69.60 E-value=12 Score=33.43 Aligned_cols=87 Identities=23% Similarity=0.171 Sum_probs=51.6
Q ss_pred CCCCeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 32 TNHELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 32 ~~~~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
-.+++++-+|+|. | ..+..++..+++|+++|+++.....+... ... . .++++. ...+|+|+....
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~-g~d--v-------~~lee~---~~~aDvVi~atG 329 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATME-GLQ--V-------LTLEDV---VSEADIFVTTTG 329 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCE--E-------CCGGGT---TTTCSEEEECSS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHh-CCc--c-------CCHHHH---HHhcCEEEeCCC
Confidence 3568899999982 2 22333445678999999999877665532 221 1 122222 235898886532
Q ss_pred -cccCChhHHHHHHHHHhcCCCcEEEEEe
Q 024647 110 -MHWFDLPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 110 -~~~~~~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
.+.++ .+..+.++ +|++++-..
T Consensus 330 ~~~vl~-----~e~l~~mk-~gaiVvNaG 352 (488)
T 3ond_A 330 NKDIIM-----LDHMKKMK-NNAIVCNIG 352 (488)
T ss_dssp CSCSBC-----HHHHTTSC-TTEEEEESS
T ss_pred Chhhhh-----HHHHHhcC-CCeEEEEcC
Confidence 22222 33567789 888776543
No 489
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=69.36 E-value=13 Score=28.32 Aligned_cols=93 Identities=13% Similarity=0.039 Sum_probs=54.4
Q ss_pred CeEEEEcCCcchhHHHH----HhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecccc
Q 024647 35 ELAWDVGTGSGQAAASL----SGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAM 110 (265)
Q Consensus 35 ~~vlDvGcG~G~~~~~l----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~ 110 (265)
++||-.|+ +|.++..+ ++++.+|++++.++..+.... +++.+...+.. |.+.- .-..+|.|+.....
T Consensus 1 MkvlVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~----d~~~~--~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIGA-TGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIF----DLTLS--DLSDQNVVVDAYGI 71 (221)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGG----GCCHH--HHTTCSEEEECCCS
T ss_pred CeEEEEcC-CchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEecccc----Chhhh--hhcCCCEEEECCcC
Confidence 35676764 45555544 456788999999988766554 67888886552 21110 11358999976654
Q ss_pred ccCC---hhHHHHHHHHHhcCC-CcEEEEE
Q 024647 111 HWFD---LPQFYNQVKWVLKKP-NGVIATW 136 (265)
Q Consensus 111 ~~~~---~~~~l~~~~~~Lk~p-gG~l~~~ 136 (265)
...+ .......+.+.+++. .+.+++.
T Consensus 72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~ 101 (221)
T 3ew7_A 72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVV 101 (221)
T ss_dssp STTTTTSHHHHHHHHHHHHCSCCSSEEEEE
T ss_pred CccccchHHHHHHHHHHHHHhcCCceEEEE
Confidence 3222 224556666666623 3456553
No 490
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=69.24 E-value=8 Score=29.86 Aligned_cols=91 Identities=16% Similarity=0.068 Sum_probs=50.3
Q ss_pred eEEEEcCCcchhHH----HHH-hcCCcEEEEcCCHH-HHHHHH-cCCCceEEecCCccchhhhhhccCCCCceeEEEecc
Q 024647 36 LAWDVGTGSGQAAA----SLS-GIFENVIGTETSPK-QIEFAT-KLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQ 108 (265)
Q Consensus 36 ~vlDvGcG~G~~~~----~l~-~~~~~v~~vD~s~~-~~~~a~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~ 108 (265)
+||-.|+ +|.++. .|+ +.+.+|++++.++. .++... ...++.+...+.... .++... + ..+|+|+.+.
T Consensus 7 ~vlVtGa-sg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~-~--~~~d~vv~~a 81 (221)
T 3r6d_A 7 YITILGA-AGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNP-GXLEQA-V--TNAEVVFVGA 81 (221)
T ss_dssp EEEEEST-TSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCH-HHHHHH-H--TTCSEEEESC
T ss_pred EEEEEeC-CcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCH-HHHHHH-H--cCCCEEEEcC
Confidence 4777774 344444 445 56778999999987 655442 336777777665211 122222 1 2579999776
Q ss_pred ccccCChhHHHHHHHHHhcCCC-cEEEE
Q 024647 109 AMHWFDLPQFYNQVKWVLKKPN-GVIAT 135 (265)
Q Consensus 109 ~~~~~~~~~~l~~~~~~Lk~pg-G~l~~ 135 (265)
...-++ .+.+.+.++..| |.++.
T Consensus 82 g~~n~~----~~~~~~~~~~~~~~~iv~ 105 (221)
T 3r6d_A 82 MESGSD----MASIVKALSRXNIRRVIG 105 (221)
T ss_dssp CCCHHH----HHHHHHHHHHTTCCEEEE
T ss_pred CCCChh----HHHHHHHHHhcCCCeEEE
Confidence 532122 444444443123 46664
No 491
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=69.14 E-value=20 Score=33.78 Aligned_cols=96 Identities=22% Similarity=0.223 Sum_probs=57.6
Q ss_pred CeEEEEcCCcc--hhHHHHHhcCCcEEEEcCCHHHHHHHHcC--------------CCceEEecCCccchhhhhhccCCC
Q 024647 35 ELAWDVGTGSG--QAAASLSGIFENVIGTETSPKQIEFATKL--------------PNIRYELTSPAMSIAELEQNVAAQ 98 (265)
Q Consensus 35 ~~vlDvGcG~G--~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--------------~~~~~~~~~~~~~~~d~~~~~~~~ 98 (265)
.+|--||+|+- .++..++..+.+|+..|++++.++.++.. ............ ..+.+.+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l---- 391 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL---- 391 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEE-ESCGGGG----
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcc-cCcHHHH----
Confidence 57899999984 45555677888999999999998876531 000000000000 0122222
Q ss_pred CceeEEEeccccccCC-hhHHHHHHHHHhcCCCcEEEEEe
Q 024647 99 STVDLVTIAQAMHWFD-LPQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 99 ~~~Dlv~~~~~~~~~~-~~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
...|+|+-+-. .-++ ..++++++..+++ |+.+|+--+
T Consensus 392 ~~aDlVIEAV~-E~l~iK~~vf~~le~~~~-~~aIlASNT 429 (742)
T 3zwc_A 392 STVDLVVEAVF-EDMNLKKKVFAELSALCK-PGAFLCTNT 429 (742)
T ss_dssp GSCSEEEECCC-SCHHHHHHHHHHHHHHSC-TTCEEEECC
T ss_pred hhCCEEEEecc-ccHHHHHHHHHHHhhcCC-CCceEEecC
Confidence 24788886511 1111 3479999999999 888777533
No 492
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=69.06 E-value=35 Score=27.39 Aligned_cols=104 Identities=15% Similarity=0.036 Sum_probs=57.3
Q ss_pred CCCCeEEEEcCCcc---hhHHHHHhcCCcEEEEcCC-HHHHHHHH----c-CCCceEEecCCccchhhhhh----ccCCC
Q 024647 32 TNHELAWDVGTGSG---QAAASLSGIFENVIGTETS-PKQIEFAT----K-LPNIRYELTSPAMSIAELEQ----NVAAQ 98 (265)
Q Consensus 32 ~~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s-~~~~~~a~----~-~~~~~~~~~~~~~~~~d~~~----~~~~~ 98 (265)
-.++++|-.|++.| .++..|++.+++|+.++.+ ....+... . ..++.+...+.... .+++. ....-
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDA-EAIEQAIRETVEAL 107 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHHc
Confidence 35577888888765 3445566778899888554 33333221 1 24566666655221 11111 10112
Q ss_pred CceeEEEeccccccC------Ch--------------hHHHHHHHHHhcCCCcEEEEEe
Q 024647 99 STVDLVTIAQAMHWF------DL--------------PQFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 99 ~~~Dlv~~~~~~~~~------~~--------------~~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
+.+|+++.+-.+... +. ..+++.+...|+ .+|.++...
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~-~~g~iv~is 165 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLG-DGGRIITIG 165 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC-TTCEEEEEC
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-cCCEEEEEe
Confidence 368999976644221 11 134566677788 788877643
No 493
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=69.02 E-value=21 Score=28.34 Aligned_cols=78 Identities=9% Similarity=-0.097 Sum_probs=44.6
Q ss_pred CCCCeEEEEcCC-cchhH----HHHHhcCCcEEEEcCCHHHHHHHH----cCCCceEEecCCccchhhhhh----ccCCC
Q 024647 32 TNHELAWDVGTG-SGQAA----ASLSGIFENVIGTETSPKQIEFAT----KLPNIRYELTSPAMSIAELEQ----NVAAQ 98 (265)
Q Consensus 32 ~~~~~vlDvGcG-~G~~~----~~l~~~~~~v~~vD~s~~~~~~a~----~~~~~~~~~~~~~~~~~d~~~----~~~~~ 98 (265)
.++++||-.|++ +|.++ ..|++++.+|+.++.+....+.++ ...++.+...++... .+++. ....-
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADD-AQIDALFASLKTHW 90 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHHHC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCH-HHHHHHHHHHHHHc
Confidence 356788988875 24344 445567889999988754433332 235577777665321 11111 11122
Q ss_pred CceeEEEecccc
Q 024647 99 STVDLVTIAQAM 110 (265)
Q Consensus 99 ~~~Dlv~~~~~~ 110 (265)
+.+|+++.+-.+
T Consensus 91 g~id~lv~nAg~ 102 (271)
T 3ek2_A 91 DSLDGLVHSIGF 102 (271)
T ss_dssp SCEEEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 478999976644
No 494
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=68.84 E-value=15 Score=29.57 Aligned_cols=75 Identities=17% Similarity=0.108 Sum_probs=48.0
Q ss_pred CeEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHHc-CCCceEEecCCccchhhhhhc----cCCCCceeEEEe
Q 024647 35 ELAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFATK-LPNIRYELTSPAMSIAELEQN----VAAQSTVDLVTI 106 (265)
Q Consensus 35 ~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~----~~~~~~~Dlv~~ 106 (265)
++||--|++.| ..+..|++.+++|+.+|.+++.++...+ ..++.+...++... .+++.+ ...-+..|+++.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~v~~~~~~~g~iDiLVN 81 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADP-LTLKKFVEYAMEKLQRIDVLVN 81 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSH-HHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCH-HHHHHHHHHHHHHcCCCCEEEE
Confidence 46777788776 4455677788999999999988876543 46777777665321 111111 112257899987
Q ss_pred cccc
Q 024647 107 AQAM 110 (265)
Q Consensus 107 ~~~~ 110 (265)
+-.+
T Consensus 82 NAG~ 85 (247)
T 3ged_A 82 NACR 85 (247)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6543
No 495
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=68.65 E-value=34 Score=27.07 Aligned_cols=104 Identities=14% Similarity=0.047 Sum_probs=58.9
Q ss_pred CCCeEEEEcCC--cc---hhHHHHHhcCCcEEEEcCCHHHHHHHHc----C--CCceEEecCCccchhhhhhc----cCC
Q 024647 33 NHELAWDVGTG--SG---QAAASLSGIFENVIGTETSPKQIEFATK----L--PNIRYELTSPAMSIAELEQN----VAA 97 (265)
Q Consensus 33 ~~~~vlDvGcG--~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~----~--~~~~~~~~~~~~~~~d~~~~----~~~ 97 (265)
.++++|-.|++ .| .++..|++.+++|+.++.++...+.+.+ . .++.+...++... .+++.+ ...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTND-AEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSS-HHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCH-HHHHHHHHHHHHH
Confidence 35678888876 33 3455667788999999888754443332 1 2577777665321 111111 111
Q ss_pred CCceeEEEecccccc----------CChh--------------HHHHHHHHHhcCCCcEEEEEec
Q 024647 98 QSTVDLVTIAQAMHW----------FDLP--------------QFYNQVKWVLKKPNGVIATWCY 138 (265)
Q Consensus 98 ~~~~Dlv~~~~~~~~----------~~~~--------------~~l~~~~~~Lk~pgG~l~~~~~ 138 (265)
-+.+|+++.+-.+.. .+.+ .+++.+...++ ++|.++....
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~g~iv~isS 148 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMT-EGGSIVTLTY 148 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCT-TCEEEEEEEC
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCceEEEEec
Confidence 136898887654322 1211 24455666677 6888876443
No 496
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=68.07 E-value=25 Score=28.56 Aligned_cols=86 Identities=13% Similarity=0.082 Sum_probs=50.7
Q ss_pred CeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEecccccc
Q 024647 35 ELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQAMHW 112 (265)
Q Consensus 35 ~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~~~~ 112 (265)
++|.=||||. | .++..|.+.+.+|+++|.++..++...+. ++... .+.++.. ...|+|+..-.-..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~--------~~~~~~~---~~~D~vi~~v~~~~ 73 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA-GAETA--------STAKAIA---EQCDVIITMLPNSP 73 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCEEC--------SSHHHHH---HHCSEEEECCSSHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-CCeec--------CCHHHHH---hCCCEEEEECCCHH
Confidence 4788999986 3 34455666777899999999988776643 33221 1222211 24788887632100
Q ss_pred CChhHHH---HHHHHHhcCCCcEEE
Q 024647 113 FDLPQFY---NQVKWVLKKPNGVIA 134 (265)
Q Consensus 113 ~~~~~~l---~~~~~~Lk~pgG~l~ 134 (265)
+...++ +++...++ +|..++
T Consensus 74 -~~~~~~~~~~~l~~~l~-~~~~vv 96 (299)
T 1vpd_A 74 -HVKEVALGENGIIEGAK-PGTVLI 96 (299)
T ss_dssp -HHHHHHHSTTCHHHHCC-TTCEEE
T ss_pred -HHHHHHhCcchHhhcCC-CCCEEE
Confidence 112344 45567788 777654
No 497
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=67.82 E-value=18 Score=30.74 Aligned_cols=94 Identities=16% Similarity=0.110 Sum_probs=55.1
Q ss_pred CCeEEEEcCCc-c-hhHHHHHhcCCcEEEEcCCHHHHHHHHc-C------CCceEEecCCccchhhhhhccCCCCceeEE
Q 024647 34 HELAWDVGTGS-G-QAAASLSGIFENVIGTETSPKQIEFATK-L------PNIRYELTSPAMSIAELEQNVAAQSTVDLV 104 (265)
Q Consensus 34 ~~~vlDvGcG~-G-~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~------~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv 104 (265)
.++|.=||+|. | .++..|++.+.+|+..|.+++.++..++ . +++.+ ....... .|.++. -...|+|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l-~~~i~~t-~d~~ea---~~~aDvV 103 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPF-PETLKAY-CDLKAS---LEGVTDI 103 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCC-CTTEEEE-SCHHHH---HTTCCEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCcc-CCCeEEE-CCHHHH---HhcCCEE
Confidence 46799999997 3 4556677778899999999988876653 1 12111 0000000 122221 1247888
Q ss_pred EeccccccCChhHHHHHHHHHhcCCCcEEEE
Q 024647 105 TIAQAMHWFDLPQFYNQVKWVLKKPNGVIAT 135 (265)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~~~~Lk~pgG~l~~ 135 (265)
+..-.-+ ....+++++...|+ |+..++.
T Consensus 104 ilaVp~~--~~~~vl~~i~~~l~-~~~ivvs 131 (356)
T 3k96_A 104 LIVVPSF--AFHEVITRMKPLID-AKTRIAW 131 (356)
T ss_dssp EECCCHH--HHHHHHHHHGGGCC-TTCEEEE
T ss_pred EECCCHH--HHHHHHHHHHHhcC-CCCEEEE
Confidence 8763211 23457777777787 6765543
No 498
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=67.42 E-value=14 Score=37.22 Aligned_cols=77 Identities=10% Similarity=0.027 Sum_probs=51.1
Q ss_pred CCeEEEEcCCcchhHHHHHhcCC-c-EEEEcCCHHHHHHHHc-CCCceEEecCCccch-----hhhh-----hccCCCCc
Q 024647 34 HELAWDVGTGSGQAAASLSGIFE-N-VIGTETSPKQIEFATK-LPNIRYELTSPAMSI-----AELE-----QNVAAQST 100 (265)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~~~~~-~-v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~-----~d~~-----~~~~~~~~ 100 (265)
..+++|+-||.|.++..+.+.+. + +.++|+++..++.-+. +++......++.... ++.. .++ ..+.
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp-~~~~ 929 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLP-QKGD 929 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCTTSEEECSCHHHHHHHHTTTCSBCSSCCBCC-CTTT
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCCCcEeeccHHHHhHhhhccchhhhhhhhcc-ccCc
Confidence 45799999999999999998885 4 7899999999886553 456555554331110 1110 111 1346
Q ss_pred eeEEEeccccc
Q 024647 101 VDLVTIAQAMH 111 (265)
Q Consensus 101 ~Dlv~~~~~~~ 111 (265)
+|+|+......
T Consensus 930 vDvl~GGpPCQ 940 (1330)
T 3av4_A 930 VEMLCGGPPCQ 940 (1330)
T ss_dssp CSEEEECCCCT
T ss_pred cceEEecCCCc
Confidence 89999876443
No 499
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=66.74 E-value=14 Score=30.74 Aligned_cols=91 Identities=8% Similarity=-0.046 Sum_probs=55.5
Q ss_pred CCeEEEEcCCcchhHHHHHh----cCCcEEEEcCCHHHHHHHHcCCCceEEecCCccchhhhhhccCCCCceeEEEeccc
Q 024647 34 HELAWDVGTGSGQAAASLSG----IFENVIGTETSPKQIEFATKLPNIRYELTSPAMSIAELEQNVAAQSTVDLVTIAQA 109 (265)
Q Consensus 34 ~~~vlDvGcG~G~~~~~l~~----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dlv~~~~~ 109 (265)
.++++=+|+| ..+..+++ .+. |+.+|.+++.++ ++. .++.+..+++... ..++.. .-+.+|.+++...
T Consensus 115 ~~~viI~G~G--~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-~~~~~i~gd~~~~-~~L~~a--~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 115 SRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKK-VLR-SGANFVHGDPTRV-SDLEKA--NVRGARAVIVDLE 186 (336)
T ss_dssp -CEEEEESCC--HHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-TTCEEEESCTTSH-HHHHHT--CSTTEEEEEECCS
T ss_pred cCCEEEECCc--HHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-CCcEEEEeCCCCH-HHHHhc--ChhhccEEEEcCC
Confidence 4578888874 55555554 455 999999999998 665 5778888766211 122223 2356899887532
Q ss_pred cccCChh--HHHHHHHHHhcCCCcEEEEEe
Q 024647 110 MHWFDLP--QFYNQVKWVLKKPNGVIATWC 137 (265)
Q Consensus 110 ~~~~~~~--~~l~~~~~~Lk~pgG~l~~~~ 137 (265)
+.. -......+-+. |...++.-.
T Consensus 187 ----~d~~n~~~~~~ar~~~-~~~~iiar~ 211 (336)
T 1lnq_A 187 ----SDSETIHCILGIRKID-ESVRIIAEA 211 (336)
T ss_dssp ----SHHHHHHHHHHHHTTC-TTSEEEEEC
T ss_pred ----ccHHHHHHHHHHHHHC-CCCeEEEEE
Confidence 222 23445556667 666666543
No 500
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=66.74 E-value=7.2 Score=31.47 Aligned_cols=77 Identities=10% Similarity=-0.008 Sum_probs=45.5
Q ss_pred CCCeEEEEcCCcc---hhHHHHHhcCCcEEEEcCCHHHHHHHHc--CCCceEEecCCccchhhhhhc----cCCCCceeE
Q 024647 33 NHELAWDVGTGSG---QAAASLSGIFENVIGTETSPKQIEFATK--LPNIRYELTSPAMSIAELEQN----VAAQSTVDL 103 (265)
Q Consensus 33 ~~~~vlDvGcG~G---~~~~~l~~~~~~v~~vD~s~~~~~~a~~--~~~~~~~~~~~~~~~~d~~~~----~~~~~~~Dl 103 (265)
.++++|-.|++.| .++..|++.+++|+.++.++..++...+ ..++.+...++... .+++.+ ...-+.+|+
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD~ 104 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDR-KSIKQLAEVAEREMEGIDI 104 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSH-HHHHHHHHHHHHHHTSCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCH-HHHHHHHHHHHHHcCCCCE
Confidence 4567787777655 3444556678899999999887765432 24566666555221 111111 001146899
Q ss_pred EEecccc
Q 024647 104 VTIAQAM 110 (265)
Q Consensus 104 v~~~~~~ 110 (265)
++.+-.+
T Consensus 105 lvnnAg~ 111 (266)
T 3grp_A 105 LVNNAGI 111 (266)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9876654
Done!