Your job contains 1 sequence.
>024653
MADFAQDLQYFRASSSFPFLDIDPNIEQINNNLSVLDNTSLLNYQSFMPFSNPDNFFEFP
GNLAENFPGNFIQNNMLPVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKN
SGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCY
KTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETMQKAKAYKAKEM
ERLMKEGNFACSSSSSFLTITRPL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024653
(264 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 445 4.7e-48 2
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 441 2.6e-45 2
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 359 6.7e-33 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 294 5.2e-26 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 295 6.8e-26 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 287 2.9e-25 1
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 286 1.2e-24 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 283 1.2e-24 1
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 279 2.0e-24 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 277 3.3e-24 1
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 281 3.7e-24 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 281 3.9e-24 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 274 6.8e-24 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 272 1.1e-23 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 272 1.2e-23 1
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 273 1.5e-23 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 269 2.3e-23 1
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 267 3.8e-23 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 266 4.8e-23 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 276 5.0e-23 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 264 7.8e-23 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 262 1.3e-22 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 260 2.1e-22 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 259 2.6e-22 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 255 7.0e-22 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 242 1.7e-20 1
TAIR|locus:2076581 - symbol:AT3G57800 "AT3G57800" species... 150 2.5e-17 2
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 182 3.1e-16 2
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 185 3.2e-14 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 183 4.3e-14 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 190 4.3e-14 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 185 5.5e-14 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 179 1.6e-13 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 178 1.8e-13 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 179 3.8e-13 1
UNIPROTKB|Q6Z1F9 - symbol:OSJNBa0033D24.39 "BHLH transcri... 170 7.1e-13 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 171 4.5e-12 1
UNIPROTKB|Q69WX7 - symbol:P0417G12.19 "Basic helix-loop-h... 148 1.5e-10 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 147 2.0e-10 1
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 145 3.2e-10 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 158 6.6e-10 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 155 2.3e-09 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 154 2.4e-09 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 154 3.1e-09 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 152 4.7e-09 1
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 148 5.1e-09 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 149 7.3e-09 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 145 9.9e-09 2
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 117 1.4e-08 2
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 146 1.8e-08 1
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 144 1.9e-08 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 145 2.2e-08 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 149 2.3e-08 1
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 147 2.5e-08 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 147 2.7e-08 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 142 3.5e-08 1
TAIR|locus:2026037 - symbol:FBH3 "AT1G51140" species:3702... 145 4.0e-08 1
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 144 4.8e-08 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 145 5.4e-08 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 144 7.3e-08 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 141 7.9e-08 1
UNIPROTKB|Q2QMM0 - symbol:LOC_Os12g40710 "Helix-loop-heli... 136 2.4e-07 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 138 3.1e-07 1
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 129 9.2e-07 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 128 1.7e-06 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 127 1.8e-06 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 128 2.0e-06 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 132 2.1e-06 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 130 3.0e-06 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 127 3.3e-06 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 123 4.7e-06 1
TAIR|locus:505006103 - symbol:AT1G05805 "AT1G05805" speci... 125 1.2e-05 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 123 1.6e-05 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 117 3.9e-05 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 117 4.4e-05 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 116 4.6e-05 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 116 6.2e-05 1
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 114 0.00019 1
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 113 0.00022 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 115 0.00022 1
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 114 0.00026 1
UNIPROTKB|Q5TKP7 - symbol:OJ1362_G11.11 "Putative unchara... 114 0.00031 1
UNIPROTKB|Q657D1 - symbol:P0697C12.40 "BHLH transcription... 114 0.00039 1
TAIR|locus:2098008 - symbol:PIL2 "phytochrome interacting... 112 0.00043 1
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 107 0.00044 2
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 110 0.00051 1
UNIPROTKB|Q2QQ32 - symbol:LOC_Os12g32400 "Helix-loop-heli... 106 0.00053 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 113 0.00068 1
UNIPROTKB|Q5MP56 - symbol:BA1 "Uncharacterized protein" s... 106 0.00074 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 104 0.00083 1
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 445 (161.7 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 90/112 (80%), Positives = 101/112 (90%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATDSHS+AERVRRGKINERL+CLQDIVPGCYKTMGM MLDEIINYVQSLQNQV
Sbjct: 148 RARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQV 207
Query: 204 EFLSMKLTAASTFYDFNSESDAVETMQKAKAYKAKEMERLMKEGNFACSSSS 255
EFLSMKLTAAS++YDFNSE+DAVE+MQKAKA +A EM + ++G+ SSS
Sbjct: 208 EFLSMKLTAASSYYDFNSETDAVESMQKAKAREAVEMGQ-GRDGSSVFHSSS 258
Score = 74 (31.1 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 14 SSSFPFLDIDPNIEQINNNLSVLDNTSLLNYQSFMP-FSNP-DNFFEFPGNLAENFPGNF 71
SS F +D I Q L+ L NT L ++Q+F P FS+ D+ F F ++FPG
Sbjct: 5 SSDFQTFTMDDPIRQ----LAELSNT-LHHFQTFPPPFSSSLDSLF-FHNQFPDHFPGKS 58
Query: 72 IQNN 75
++NN
Sbjct: 59 LENN 62
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 441 (160.3 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 86/105 (81%), Positives = 96/105 (91%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATDSHSLAERVRRGKINERLRCLQD+VPGCYK MGM MLDEIINYVQSLQNQV
Sbjct: 146 RARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQV 205
Query: 204 EFLSMKLTAASTFYDFNSESDAVETMQKAKAYKAKEMERLMKEGN 248
EFLSMKLTAAS+FYDFNSE+DAV++MQ+AKA + EM R ++G+
Sbjct: 206 EFLSMKLTAASSFYDFNSETDAVDSMQRAKARETVEMGRQTRDGS 250
Score = 52 (23.4 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 26/94 (27%), Positives = 42/94 (44%)
Query: 14 SSSFPFLDIDPNIEQINNNLSVLDNTSLLNYQSFMPFSNP-DNFF---------EFPGNL 63
SS F + +D I + +N S L++Q+F P S ++ F FPGN
Sbjct: 8 SSDFQTIAMDI-YSSITQAADLNNNNSNLHFQTFHPSSTSLESLFLHHHQQQLLHFPGNS 66
Query: 64 AENFPGNFIQ-NNMLPVCHTVTSTKCESKNRKAV 96
++ NF ++ L H + E+K RKA+
Sbjct: 67 PDS-SNNFSSTSSFLHSDHNIVD---ETKKRKAL 96
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 70/104 (67%), Positives = 85/104 (81%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RGQATDSHSLAERVRR KINERL+CLQD+VPGCYK MGM +MLD II+YV+SLQNQ+
Sbjct: 105 RAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQI 164
Query: 204 EFLSMKLTAASTFYDFNS-ESDAVETMQKAKAYKAKEMERLMKE 246
EFLSMKL+AAS YD NS + + + Q + A EMER+++E
Sbjct: 165 EFLSMKLSAASACYDLNSLDIEPTDIFQGGNIHSAAEMERILRE 208
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 60/84 (71%), Positives = 69/84 (82%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATDSHSLAERVRR KI+ER+R LQ++VPGC K G +MLDEIINYVQ+LQ QV
Sbjct: 137 RARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQV 196
Query: 204 EFLSMKLTAAS-TFYDFNSESDAV 226
EFLSMKLT+ S YDF S+ D +
Sbjct: 197 EFLSMKLTSISPVVYDFGSDLDGL 220
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 295 (108.9 bits), Expect = 6.8e-26, P = 6.8e-26
Identities = 58/80 (72%), Positives = 68/80 (85%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QV
Sbjct: 259 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 318
Query: 204 EFLSMKLTAASTFYDFNSES 223
EFLSMKL++ +T DFN ++
Sbjct: 319 EFLSMKLSSVNTRLDFNMDA 338
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 58/80 (72%), Positives = 67/80 (83%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQAT+SHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ Q+
Sbjct: 224 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQI 283
Query: 204 EFLSMKLTAASTFYDFNSES 223
EFLSMKL+A + DFN ES
Sbjct: 284 EFLSMKLSAVNPVLDFNLES 303
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 286 (105.7 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 66/112 (58%), Positives = 77/112 (68%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATDSHSLAERVRR KI ER++ LQD+VPGC K G +MLDEIINYVQSLQ QV
Sbjct: 302 RARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 361
Query: 204 EFLSMKLTAAS-TFYDFNSESDAVETMQKAKAYKAKEMERLMKEGNFACSSS 254
EFLSMKL++ + T DFN V+ + RL +EG + SSS
Sbjct: 362 EFLSMKLSSVNDTRLDFN-----VDALVSKDVMIPSSNNRLHEEGLQSKSSS 408
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 283 (104.7 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 57/79 (72%), Positives = 65/79 (82%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQAT+SHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QV
Sbjct: 261 RARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 320
Query: 204 EFLSMKLTAASTFYDFNSE 222
EFLSMKL + + DFN E
Sbjct: 321 EFLSMKLASVNPTLDFNIE 339
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 61/102 (59%), Positives = 72/102 (70%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G +MLDEII+YVQSLQNQV
Sbjct: 181 RARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQV 240
Query: 204 EFLSMKLTAASTF-YDFNSESDAVETMQKAKAYKAKEMERLM 244
EFLSMKL + S Y+F D + + A EM + M
Sbjct: 241 EFLSMKLASLSPLMYEFGPGIDMHPDVLRQLAKMPHEMVQCM 282
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 56/81 (69%), Positives = 65/81 (80%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATDSHSLAERVRR +I+ER+R LQ++VPGC K G MLDEIINYVQSLQ QV
Sbjct: 165 RARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQV 224
Query: 204 EFLSMKLTAASTFYDFNSESD 224
EFLSMK+ A++ +FN D
Sbjct: 225 EFLSMKIAASNPVVNFNIVED 245
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 281 (104.0 bits), Expect = 3.7e-24, P = 3.7e-24
Identities = 55/78 (70%), Positives = 65/78 (83%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRG+ATDSHSLAERVRR KI++R++ LQD+VPGC K +G +MLDEIINYVQSLQ QV
Sbjct: 278 RARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQV 337
Query: 204 EFLSMKLTAASTFYDFNS 221
EFLSMKL + DFN+
Sbjct: 338 EFLSMKLATVNPQLDFNN 355
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 281 (104.0 bits), Expect = 3.9e-24, P = 3.9e-24
Identities = 57/79 (72%), Positives = 64/79 (81%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQAT+SHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QV
Sbjct: 304 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 363
Query: 204 EFLSMKLTAASTFYDFNSE 222
EFLSMKL + DFN E
Sbjct: 364 EFLSMKLATVNPQMDFNLE 382
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 56/92 (60%), Positives = 69/92 (75%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATDSHSLAER RR KI+ER+ LQD+VPGC + G +MLDEIINYVQSLQ QV
Sbjct: 192 RARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQV 251
Query: 204 EFLSMKLTAASTFYDFNSESD-AVETMQKAKA 234
EFLSMKL + +FN+ + + E +Q ++
Sbjct: 252 EFLSMKLATVNPRMEFNANASLSTEMIQPGES 283
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 54/80 (67%), Positives = 66/80 (82%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RAR+GQAT++HSLAER+RR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QV
Sbjct: 177 RARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQV 236
Query: 204 EFLSMKLTAASTFYDFNSES 223
EFLSMKL+A + D + ES
Sbjct: 237 EFLSMKLSAVNPRIDLDIES 256
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 272 (100.8 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 54/78 (69%), Positives = 65/78 (83%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATDSHSLAERVRR +I++R++ LQD+VPGC K +G +MLDEIINYVQSLQ QV
Sbjct: 205 RARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQV 264
Query: 204 EFLSMKLTAASTFYDFNS 221
EFLSMKL + DF++
Sbjct: 265 EFLSMKLATVNPL-DFSN 281
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 273 (101.2 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 55/79 (69%), Positives = 63/79 (79%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQAT+SHSLAER+RR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QV
Sbjct: 249 RARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 308
Query: 204 EFLSMKLTAASTFYDFNSE 222
EFLSMKL + D N E
Sbjct: 309 EFLSMKLATVNPRLDLNIE 327
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 52/72 (72%), Positives = 62/72 (86%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QSLQ QV
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 196
Query: 204 EFLSMKLTAAST 215
EFLSMKL A ++
Sbjct: 197 EFLSMKLEAVNS 208
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 54/79 (68%), Positives = 63/79 (79%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATDSHS+AERVRR KI+ER++ LQD+VPGC K G MLDEIINYVQSLQ Q+
Sbjct: 173 RARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQI 232
Query: 204 EFLSMKLTAASTFYDFNSE 222
EFLSMKL + DF+ +
Sbjct: 233 EFLSMKLAIVNPRPDFDMD 251
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 55/83 (66%), Positives = 65/83 (78%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQAT+SHSLAERVRR KI+ER+R LQ++VPGC K G +MLDEIINYVQSLQ QV
Sbjct: 207 RARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 266
Query: 204 EFLSMKLTAASTFYDFNSESDAV 226
EFLSMKL + + N + D +
Sbjct: 267 EFLSMKLATVNP--EINIDIDRI 287
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 276 (102.2 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 59/94 (62%), Positives = 69/94 (73%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RGQAT+SHSLAER RR KINER++ LQD+VPGC K G MMLDEIINYVQSLQ QV
Sbjct: 629 RAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQV 688
Query: 204 EFLSMKLTAASTFYDFNSESDAVETMQKAKAYKA 237
EFLSMKL+ S + NS+ D + + A A
Sbjct: 689 EFLSMKLSTISP--ELNSDLDLQDILCSQDARSA 720
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 53/79 (67%), Positives = 63/79 (79%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RGQAT+SHSLAER+RR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QV
Sbjct: 148 RAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQV 207
Query: 204 EFLSMKLTAASTFYDFNSE 222
EFLSMKL + F+ E
Sbjct: 208 EFLSMKLATVNPELSFDIE 226
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 51/71 (71%), Positives = 60/71 (84%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G +LDEIINY+Q+LQ QV
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQV 196
Query: 204 EFLSMKLTAAS 214
EFLSMKL A +
Sbjct: 197 EFLSMKLEAVN 207
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 51/68 (75%), Positives = 58/68 (85%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRG+ATD HSLAER RR KI+++++CLQDIVPGC K G MLDEIINYVQSLQ QV
Sbjct: 142 RARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQV 201
Query: 204 EFLSMKLT 211
EFLSMKL+
Sbjct: 202 EFLSMKLS 209
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 51/80 (63%), Positives = 63/80 (78%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATD+HSLAER RR KIN R++ LQ++VPGC K G ++LDEIIN+VQ+LQ QV
Sbjct: 186 RARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQV 245
Query: 204 EFLSMKLTAASTFYDFNSES 223
E LSM+L A + DFN +S
Sbjct: 246 EMLSMRLAAVNPRIDFNLDS 265
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 49/72 (68%), Positives = 59/72 (81%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATD HSLAER RR KI+E++ LQDI+PGC K +G ++LDEIINY+QSLQ QV
Sbjct: 154 RARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQV 213
Query: 204 EFLSMKLTAAST 215
EFLSMKL ++
Sbjct: 214 EFLSMKLEVVNS 225
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 46/63 (73%), Positives = 55/63 (87%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G +LDEIINY+QSLQ+QV
Sbjct: 129 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQV 188
Query: 204 EFL 206
EF+
Sbjct: 189 EFM 191
>TAIR|locus:2076581 [details] [associations]
symbol:AT3G57800 "AT3G57800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL049660 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000037005 ProtClustDB:CLSN2680198
EMBL:AF488593 EMBL:AL132977 EMBL:AY139773 EMBL:BT003037
EMBL:AY085849 IPI:IPI00532305 IPI:IPI00535946 PIR:T46002
RefSeq:NP_567057.2 RefSeq:NP_850745.1 UniGene:At.34797
ProteinModelPortal:Q3EAI1 EnsemblPlants:AT3G57800.1 GeneID:825530
KEGG:ath:AT3G57800 TAIR:At3g57800 eggNOG:NOG254513
InParanoid:Q3EAI1 OMA:MVASANL PhylomeDB:Q3EAI1
Genevestigator:Q3EAI1 Uniprot:Q3EAI1
Length = 426
Score = 150 (57.9 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 29/38 (76%), Positives = 33/38 (86%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYK 181
RARRGQATDSHSLAER RR KIN R++ LQ++VPGC K
Sbjct: 205 RARRGQATDSHSLAERARREKINARMKLLQELVPGCDK 242
Score = 114 (45.2 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 23/43 (53%), Positives = 31/43 (72%)
Query: 181 KTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
+ G ++LDEIIN+VQSLQ QVE LSM+L A + DFN ++
Sbjct: 289 RIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDT 331
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 182 (69.1 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 39/65 (60%), Positives = 50/65 (76%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ QV
Sbjct: 134 RARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILDYVKFLRLQV 192
Query: 204 EFLSM 208
+ LSM
Sbjct: 193 KVLSM 197
Score = 36 (17.7 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 54 DNFFEFPGNLAENFPG 69
D+FF+ +L +FPG
Sbjct: 14 DDFFDQFFSLTSSFPG 29
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 185 (70.2 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 50/108 (46%), Positives = 68/108 (62%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATD HS+AER+RR +I ER++ LQ++VP KT MLDEII+YV+ LQ QV
Sbjct: 131 RARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT-DKASMLDEIIDYVKFLQLQV 189
Query: 204 EFLSM-KLTAASTFYDFNSESDAVETMQKAKAYKAKEME----RLMKE 246
+ LSM +L A++ SE + + +AK E +LM+E
Sbjct: 190 KVLSMSRLGGAASASSQISEDAGGSHENTSSSGEAKMTEHQVAKLMEE 237
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 183 (69.5 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 40/65 (61%), Positives = 49/65 (75%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATD HS+AER+RR +I ER++ LQ++VP KT MLDEII YV+ LQ QV
Sbjct: 100 RARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKT-DKASMLDEIIEYVRFLQLQV 158
Query: 204 EFLSM 208
+ LSM
Sbjct: 159 KVLSM 163
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 190 (71.9 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 44/81 (54%), Positives = 58/81 (71%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATD HS+AER+RR KI++R++ LQ++VP KT MLDEII+YV+ LQ QV
Sbjct: 315 RARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKT-NKASMLDEIIDYVKFLQLQV 373
Query: 204 EFLSM-KLTAASTFYDFNSES 223
+ LSM +L AA +E+
Sbjct: 374 KVLSMSRLGAAEAVVPLLTET 394
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 185 (70.2 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 44/81 (54%), Positives = 58/81 (71%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATD HS+AER+RR +I ER++ LQ++VP KT MLDEII+YV+ LQ QV
Sbjct: 139 RARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDYVKFLQLQV 197
Query: 204 EFLSM-KLTAASTFYDFNSES 223
+ LSM +L A++ SE+
Sbjct: 198 KVLSMSRLGGAASVSSQISEA 218
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 179 (68.1 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 38/65 (58%), Positives = 50/65 (76%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATD HS+AER+RR +I ER+R LQ++VP KT M+DEI++YV+ L+ QV
Sbjct: 147 RARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQV 205
Query: 204 EFLSM 208
+ LSM
Sbjct: 206 KVLSM 210
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 178 (67.7 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 38/65 (58%), Positives = 50/65 (76%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATD HS+AER+RR +I ER+R LQ++VP KT M+DEI++YV+ L+ QV
Sbjct: 145 RARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVDYVKFLRLQV 203
Query: 204 EFLSM 208
+ LSM
Sbjct: 204 KVLSM 208
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 179 (68.1 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 41/70 (58%), Positives = 50/70 (71%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATD HS+AER+RR KI+ER++ LQ +VP K MLDEII+YV+ LQ QV
Sbjct: 240 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKA-DKASMLDEIIDYVKFLQLQV 298
Query: 204 EFLSMKLTAA 213
+ LSM A
Sbjct: 299 KVLSMSRLGA 308
>UNIPROTKB|Q6Z1F9 [details] [associations]
symbol:OSJNBa0033D24.39 "BHLH transcription factor-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 GO:GO:0005634
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005439
EMBL:AP004464 RefSeq:NP_001062365.1 UniGene:Os.89290 GeneID:4346166
KEGG:osa:4346166 Uniprot:Q6Z1F9
Length = 143
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAV 226
+R LQ +VPGC K G ++LDEIINYVQSLQNQVEFLSM++ + S Y F +SD +
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGMDSDGL 59
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 171 (65.3 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 37/63 (58%), Positives = 47/63 (74%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTM--GMTMMLDEIINYVQSLQN 201
RARRGQATD HS+AER+RR +I ER++ LQ++VP K M MLDEII+YV+ LQ
Sbjct: 251 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQL 310
Query: 202 QVE 204
QV+
Sbjct: 311 QVK 313
>UNIPROTKB|Q69WX7 [details] [associations]
symbol:P0417G12.19 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 GO:GO:0005634 Gene3D:4.10.280.10
EMBL:AP003626 EMBL:AP003711 EMBL:AK070970
EnsemblPlants:LOC_Os06g41060.1 OMA:KNGMDLE Uniprot:Q69WX7
Length = 154
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVET 228
+ L+++VPGC K G ++LDEIIN+VQSLQ QVE+LSM+L A + DF + + T
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDNFLTT 60
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 29/63 (46%), Positives = 47/63 (74%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR ++ + H+ +ER RR +INE+L+ LQ+++P C KT ++M LDE I+Y++SLQ Q++
Sbjct: 10 RRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSM-LDEAIDYLKSLQLQLQM 68
Query: 206 LSM 208
L M
Sbjct: 69 LVM 71
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD ++Y++ LQ QV
Sbjct: 70 RAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQV 129
Query: 204 EFLS 207
+ L+
Sbjct: 130 KGLN 133
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 158 (60.7 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 30/63 (47%), Positives = 49/63 (77%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R +A D H+L+ER RR +INER++ LQ+++P C KT ++M L+++I YV+SLQ Q++
Sbjct: 354 KRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDKVSM-LEDVIEYVKSLQLQIQM 412
Query: 206 LSM 208
+SM
Sbjct: 413 MSM 415
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 155 (59.6 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R ++ + H+L+ER RR +INE++R LQ+++P C K + MLDE I Y++SLQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 397
Query: 205 FLSMKLTAASTFY 217
+SM AS +Y
Sbjct: 398 IMSM----ASGYY 406
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 154 (59.3 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 30/64 (46%), Positives = 46/64 (71%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A H L+ER RR KINE ++ LQ+++P C KT + MLD++I YV+SLQ+Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKT-DRSSMLDDVIEYVKSLQSQIQ 331
Query: 205 FLSM 208
SM
Sbjct: 332 MFSM 335
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 154 (59.3 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R +A + H+L+ER RR +INER++ LQ+++P C K+ MLDE I Y++SLQ Q++
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQM 339
Query: 206 LSM 208
+SM
Sbjct: 340 MSM 342
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 152 (58.6 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 32/63 (50%), Positives = 45/63 (71%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INE+LR LQ++VP C KT +LDE I Y++SLQ QV+
Sbjct: 225 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKASILDEAIEYLKSLQMQVQI 283
Query: 206 LSM 208
+ M
Sbjct: 284 MWM 286
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 148 (57.2 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 30/64 (46%), Positives = 46/64 (71%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RG AT S+AERVRR +I++R+R LQ++VP K ML+E + YV++LQ+Q+
Sbjct: 182 RAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQI 241
Query: 204 EFLS 207
+ L+
Sbjct: 242 QELT 245
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 149 (57.5 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 34/93 (36%), Positives = 57/93 (61%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+E+ RR KINE+++ LQ ++P KT MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 157
Query: 205 FLSMKLTAASTFYDFNSESDAVETMQKAKAYKA 237
LSM+ + + + S A+E Q ++ + A
Sbjct: 158 MLSMR---NGVYLNPSYLSGALEPAQASQMFAA 187
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 145 (56.1 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA RG ATD SL R RR +INERLR LQ++VP K + ++ ML+E ++YV+ LQ Q+
Sbjct: 267 RASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQI 325
Query: 204 EFLS 207
+ LS
Sbjct: 326 KLLS 329
Score = 36 (17.7 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 4 FAQDLQYFRASSSFPFLDIDPNIEQINN 31
F+Q+ + A +S + + P +E+ N
Sbjct: 74 FSQESSSYSAGNSGYYTVVPPTVEENQN 101
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 117 (46.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 160 VRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM-KLTAAS 214
+RR +I ER++ LQ++VP KT MLDEII+YV+ LQ QV+ LSM +L AS
Sbjct: 251 LRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSMSRLGGAS 305
Score = 76 (31.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 144 RARRGQATDSHSLAERV 160
RARRGQATD HS+AERV
Sbjct: 213 RARRGQATDPHSIAERV 229
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 146 (56.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 31/82 (37%), Positives = 55/82 (67%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV-E 204
+R +A + H+LAER RR KINER++ LQ ++P C K+ ++M L+++I YV+SL+ Q+ +
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSM-LEDVIEYVKSLEMQINQ 205
Query: 205 FL---SMKLTAASTFYDFNSES 223
F+ +M + + F S++
Sbjct: 206 FMPHMAMGMNQPPAYIPFPSQA 227
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 144 (55.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RG AT S+AERVRR +I++R+R LQ++VP K ML+E + YV+ LQ Q+
Sbjct: 185 RAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQI 244
Query: 204 EFLS 207
+ L+
Sbjct: 245 QELT 248
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 145 (56.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 28/66 (42%), Positives = 45/66 (68%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
R +R +A + H+L+E+ RR +INE+++ LQ ++P KT MLD+ I Y++ LQ QV
Sbjct: 27 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKT-DKASMLDDAIEYLKQLQLQV 85
Query: 204 EFLSMK 209
+ LSM+
Sbjct: 86 QMLSMR 91
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 149 (57.5 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 28/63 (44%), Positives = 45/63 (71%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R + + H+L+ER RR +INE++R LQ+++P C K + MLDE I Y+++LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 367
Query: 206 LSM 208
+SM
Sbjct: 368 MSM 370
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 147 (56.8 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 28/63 (44%), Positives = 44/63 (69%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R ++T+ H L ER RR + N+++R LQD++P CYK +LDE I Y+++LQ QV+
Sbjct: 226 KRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKD-DKASLLDEAIKYMRTLQLQVQM 284
Query: 206 LSM 208
+SM
Sbjct: 285 MSM 287
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 147 (56.8 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INER++ LQ+++P C KT +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQV 312
Query: 206 LSM 208
+ M
Sbjct: 313 MWM 315
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 142 (55.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA +G ATD SL R RR KINERL+ LQ++VP K + ++ ML+E ++YV+ LQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQI 226
Query: 204 EFLS 207
+ LS
Sbjct: 227 KLLS 230
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 145 (56.1 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 32/63 (50%), Positives = 41/63 (65%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RG AT S+AERVRR KI+ER+R LQD+VP MLD + Y++ LQ QV
Sbjct: 305 RAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQV 364
Query: 204 EFL 206
+ L
Sbjct: 365 KAL 367
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 144 (55.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RG AT S+AERVRR +I+ER+R LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 280 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQY 339
Query: 204 EFLS 207
+ L+
Sbjct: 340 KILN 343
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 145 (56.1 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 28/63 (44%), Positives = 46/63 (73%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INER++ LQ+++P C +T +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAIDYLKSLQMQLQV 311
Query: 206 LSM 208
+ M
Sbjct: 312 MWM 314
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 144 (55.7 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 29/71 (40%), Positives = 49/71 (69%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE- 204
+R + + H+LAER RR KINE+++ LQ ++P C K+ ++ LD+ I YV+SLQ+Q++
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVST-LDDAIEYVKSLQSQIQG 310
Query: 205 FLSMKLTAAST 215
+S + A +T
Sbjct: 311 MMSPMMNAGNT 321
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 141 (54.7 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA RG ATD SL R RR +INERL+ LQ++VP K + ++ ML+E ++YV+ LQ Q+
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQI 275
Query: 204 EFLS 207
+ LS
Sbjct: 276 KLLS 279
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 136 (52.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
+R A +H+L E+ RR KI ER R LQ +VPGC LD+ I Y++SLQ+Q+E
Sbjct: 78 SRHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLE 137
Query: 205 FLS-MKLTAASTFY 217
S + AA+ Y
Sbjct: 138 ATSAVGSPAAAVLY 151
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 138 (53.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 27/65 (41%), Positives = 45/65 (69%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+E+ RR +INE+++ LQ ++P KT MLDE I Y++ LQ QV+
Sbjct: 193 SKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 251
Query: 205 FLSMK 209
L+M+
Sbjct: 252 MLTMR 256
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 129 (50.5 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 28/63 (44%), Positives = 43/63 (68%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RG AT S+AER RR +I+E+LR LQ +VP K + MLD +++++ LQ+Q+
Sbjct: 135 RAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQL 194
Query: 204 EFL 206
+ L
Sbjct: 195 QTL 197
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 128 (50.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 152 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLT 211
D S+A R+RR +I+ER+R LQ +VPG K M MLDE I+YV+ L++QV+ S++
Sbjct: 150 DPQSVAARLRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKSQVQ--SLERA 206
Query: 212 AAST 215
AA+T
Sbjct: 207 AAAT 210
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 127 (49.8 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 28/64 (43%), Positives = 44/64 (68%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
+A RG A+D SL R RR +IN+RL+ LQ +VP K + ++ ML++ ++YV+ LQ Q+
Sbjct: 133 KANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLEDAVHYVKFLQLQI 191
Query: 204 EFLS 207
+ LS
Sbjct: 192 KLLS 195
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 128 (50.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMK 209
+TD S+A R+RR +I+ER+R LQ +VPG K M MLDE I+YV+ L+ QV+ L
Sbjct: 158 STDPQSVAARMRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSLERA 216
Query: 210 LTA 212
A
Sbjct: 217 AAA 219
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 132 (51.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R +A H+ +ER RR KIN+R++ LQ +VP KT MLDE+I Y++ LQ QV
Sbjct: 210 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQVSM 268
Query: 206 LS 207
+S
Sbjct: 269 MS 270
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 130 (50.8 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 26/64 (40%), Positives = 46/64 (71%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RRG+A H+ +ER RR +IN+R+R LQ ++P K +++ LD++I +++ LQ QV+F
Sbjct: 163 RRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSI-LDDVIEHLKQLQAQVQF 221
Query: 206 LSMK 209
+S++
Sbjct: 222 MSLR 225
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 127 (49.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 144 RARRGQA-TDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+ARR ++H L E+ RR +INE+ + LQ +VPGC K + LD I+Y++SLQ Q
Sbjct: 146 KARRNPGYAETHGLTEKRRRSRINEKFKMLQRLVPGCDKC-SQSSTLDRTIHYMKSLQQQ 204
Query: 203 VEFLSMKLTAASTFY 217
++ + + + Y
Sbjct: 205 LQAMYPTMVRPAAVY 219
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 123 (48.4 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
H+L+E+ RR KINE+++ LQ ++P KT MLDE I Y++ LQ QV+ L++
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTLAV 151
>TAIR|locus:505006103 [details] [associations]
symbol:AT1G05805 "AT1G05805" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC009999 HOGENOM:HOG000242890 EMBL:BT000954 EMBL:AY086106
IPI:IPI00516925 PIR:F86192 RefSeq:NP_563749.1 UniGene:At.11933
ProteinModelPortal:Q8H102 SMR:Q8H102 IntAct:Q8H102 STRING:Q8H102
PaxDb:Q8H102 PRIDE:Q8H102 EnsemblPlants:AT1G05805.1 GeneID:837090
KEGG:ath:AT1G05805 TAIR:At1g05805 eggNOG:NOG249421
InParanoid:Q8H102 OMA:NEVNETP PhylomeDB:Q8H102
ProtClustDB:CLSN2687697 Genevestigator:Q8H102 Uniprot:Q8H102
Length = 362
Score = 125 (49.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RG AT S+AER RR +I+ +L+ LQD+VP K + MLD + +++ LQ+Q+
Sbjct: 284 RAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQL 343
Query: 204 EFL 206
+ L
Sbjct: 344 QNL 346
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 123 (48.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 30/66 (45%), Positives = 45/66 (68%)
Query: 144 RARRGQ--ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
+A+ G ATD SL R RR +INERL+ LQ++VP K + ++ ML+E ++YV+ LQ
Sbjct: 220 KAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAMHYVKFLQL 278
Query: 202 QVEFLS 207
Q++ LS
Sbjct: 279 QIKLLS 284
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 117 (46.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 152 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
D S+A R RR +I+ER+R LQ +VPG K M MLDE I+YV+ L+ QV+ L
Sbjct: 128 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKKQVQSL 181
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 117 (46.2 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 152 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
D S+A R RR +I+ER+R LQ +VPG K M MLDE I+YV+ L+ QV+ L
Sbjct: 131 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKKQVQSL 184
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 116 (45.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 152 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
D S+A R RR +I+ER+R LQ +VPG K M MLDE I YV+ L+ Q+ L+
Sbjct: 128 DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLLN 182
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 116 (45.9 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 27/64 (42%), Positives = 41/64 (64%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
R + + D+ SL + RR +INERLR LQ +VP K + ++ ML+E + YV+ LQ Q+
Sbjct: 156 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTK-VDISTMLEEAVQYVKFLQLQI 214
Query: 204 EFLS 207
+ LS
Sbjct: 215 KLLS 218
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 114 (45.2 bits), Expect = 0.00019, P = 0.00019
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARR AT + SL R RR +IN RLR LQ +VP K + ++ ML+E ++YV+ LQ Q++
Sbjct: 212 ARRRSATIAQSLYARRRRERINGRLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQLQIK 270
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 113 (44.8 bits), Expect = 0.00022, P = 0.00022
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 155 SLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
S A +VRR +I+ERL+ LQD+VP K + + ML++ INYV+ LQ QV+ L+
Sbjct: 210 SAAAKVRRERISERLKVLQDLVPNGTK-VDLVTMLEKAINYVKFLQLQVKVLA 261
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 115 (45.5 bits), Expect = 0.00022, P = 0.00022
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMK 209
++D ++A R+RR ++++RLR LQ +VPG K M MLDE +Y++ L++QV+ L
Sbjct: 282 SSDPQTVAARLRRERVSDRLRVLQKLVPGGNK-MDTASMLDEAASYLKFLKSQVQKLETL 340
Query: 210 LTAAST 215
T +T
Sbjct: 341 GTTTTT 346
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 114 (45.2 bits), Expect = 0.00026, P = 0.00026
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL-SM 208
+TD ++A R RR +I+E++R LQ +VPG K M MLDE NY++ L+ QV+ L ++
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKALENL 334
Query: 209 KLTAASTFYDFNS 221
+ T F+S
Sbjct: 335 RPKLDQTNLSFSS 347
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 114 (45.2 bits), Expect = 0.00031, P = 0.00031
Identities = 25/57 (43%), Positives = 40/57 (70%)
Query: 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
++D ++A R+RR +++ERLR LQ +VPG K M MLDE +Y++ L++Q+E L
Sbjct: 304 SSDPQTVAARLRRERVSERLRVLQRLVPGGSK-MDTATMLDEAASYLKFLKSQLEAL 359
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 114 (45.2 bits), Expect = 0.00039, P = 0.00039
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
++D ++A R RR +I+ERLR LQ +VPG K M MLDE NY++ L++Q+ L
Sbjct: 371 SSDPQTVAARQRRERISERLRVLQKLVPGGAK-MDTASMLDEAANYLRFLKSQIREL 426
>TAIR|locus:2098008 [details] [associations]
symbol:PIL2 "phytochrome interacting factor 3-like 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010017 "red or far-red light signaling
pathway" evidence=IEP] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 GO:GO:0010017
EMBL:AL138651 EMBL:AB090874 EMBL:BT033108 IPI:IPI00525935
IPI:IPI00846835 PIR:T48001 RefSeq:NP_001078329.1 RefSeq:NP_191768.2
UniGene:At.1005 UniGene:At.50304 ProteinModelPortal:Q8L5W7
SMR:Q8L5W7 IntAct:Q8L5W7 STRING:Q8L5W7 EnsemblPlants:AT3G62090.2
GeneID:825382 KEGG:ath:AT3G62090 TAIR:At3g62090 eggNOG:NOG305930
HOGENOM:HOG000115543 InParanoid:Q8L5W7 OMA:ETNMLES PhylomeDB:Q8L5W7
ProtClustDB:CLSN2680935 Genevestigator:Q8L5W7 Uniprot:Q8L5W7
Length = 363
Score = 112 (44.5 bits), Expect = 0.00043, P = 0.00043
Identities = 23/63 (36%), Positives = 43/63 (68%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R + ++++ ER +R IN+++R LQ+++P +K +M LDE INY+ +LQ QV+
Sbjct: 185 KRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESM-LDEAINYMTNLQLQVQM 243
Query: 206 LSM 208
++M
Sbjct: 244 MTM 246
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 107 (42.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 152 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
D SLA + RR +I+ERL+ LQ++VP K + + ML++ I+YV+ LQ QV+ L+
Sbjct: 204 DPQSLAAKNRRERISERLKILQELVPNGTK-VDLVTMLEKAISYVKFLQVQVKVLA 258
Score = 38 (18.4 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 24 PNIEQINNNLSVLDNTSLLNYQSFMPFSNP 53
P+ E +N+L + +S LN+ F P
Sbjct: 67 PSGEDHHNSLMDFNGSSFLNFDHHESFPPP 96
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 110 (43.8 bits), Expect = 0.00051, P = 0.00051
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 152 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
D SLA + RR +I+ERLR LQ++VP K + + ML++ I+YV+ LQ QV+ L+
Sbjct: 206 DPQSLAAKNRRERISERLRILQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLA 260
>UNIPROTKB|Q2QQ32 [details] [associations]
symbol:LOC_Os12g32400 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
eggNOG:NOG284967 Uniprot:Q2QQ32
Length = 198
Score = 106 (42.4 bits), Expect = 0.00053, P = 0.00053
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
A S S + RR +INERLR LQ+++P K + ++ ML+E I YV+ L Q++ LS
Sbjct: 115 AESSQSYYAKNRRQRINERLRILQELIPNGTK-VDISTMLEEAIQYVKFLHLQIKLLS 171
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 113 (44.8 bits), Expect = 0.00068, P = 0.00068
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 149 QATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
+ T +H+L+E+ RR K+NER L+ I+P K + +LD+ I Y+Q LQ +V+ L
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISK-IDKVSILDDTIEYLQDLQKRVQELES 459
Query: 209 KLTAAST 215
+A T
Sbjct: 460 CRESADT 466
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 106 (42.4 bits), Expect = 0.00074, P = 0.00074
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 144 RARRGQ--ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
R R G +TD S+A R RR +I++R R L+ +VPG K M ML++ I+YV+ L+
Sbjct: 45 RRRPGAKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKT 103
Query: 202 QV 203
Q+
Sbjct: 104 QI 105
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 104 (41.7 bits), Expect = 0.00083, P = 0.00083
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 161 RRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
RR +IN++++ LQ +VP KT MLDE+I+Y++ LQ QV+ +S
Sbjct: 13 RRDRINQKMKTLQKLVPNSSKT-DKASMLDEVIDYLKQLQAQVQVMS 58
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.131 0.373 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 264 220 0.00094 112 3 11 22 0.37 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 90
No. of states in DFA: 569 (61 KB)
Total size of DFA: 156 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.50u 0.21s 18.71t Elapsed: 00:00:01
Total cpu time: 18.50u 0.21s 18.71t Elapsed: 00:00:01
Start: Fri May 10 17:43:52 2013 End: Fri May 10 17:43:53 2013