BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024653
(264 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/266 (64%), Positives = 204/266 (76%), Gaps = 23/266 (8%)
Query: 1 MADFAQDLQYFRASSSFPFLDIDPNIEQINN----NLSVLDNTSLLNYQSFMPFSNPDNF 56
MADF DLQ FR FPFLDIDP++ ++ + ++LDN S+ N SFMPF++ DNF
Sbjct: 1 MADFTADLQSFRPP--FPFLDIDPSMVALSQFTEVSQAILDNPSVNNIHSFMPFTS-DNF 57
Query: 57 F-----EFPGNLAENFPGNFIQNN--MLPVCHTVTSTK-----CESKNRKAVEISESSNE 104
F EFPGNLAE F G F QN+ ++PV T+ ESK RKA+++SESS+
Sbjct: 58 FSHQAPEFPGNLAEGFAGIFHQNDQTVMPVSQPFTTPGNESEFQESKKRKAMDVSESSSM 117
Query: 105 DSSP-VSEIETNKRKKNSGRR-KRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRR 162
+SSP VSE + +R NS RR K VK NE + K K+VVHVRARRGQATDSHSLAERVRR
Sbjct: 118 NSSPQVSESGSKRRNVNSSRRGKGVKSNE--DGKPKDVVHVRARRGQATDSHSLAERVRR 175
Query: 163 GKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
GKINERLRCLQDIVPGCYKTMGM +MLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN+E
Sbjct: 176 GKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNAE 235
Query: 223 SDAVETMQKAKAYKAKEMERLMKEGN 248
+DA+ETMQ+AKA +AKE++R M+EG+
Sbjct: 236 TDAIETMQRAKAQEAKELQRAMREGS 261
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/273 (60%), Positives = 204/273 (74%), Gaps = 20/273 (7%)
Query: 1 MADFAQDLQYFRASSSFPFLDIDPNIEQIN-----NNLSVLDNTSLLNYQSFMPFSNPDN 55
MADF DLQ F+ FPFLDID ++ IN N LDN + N+ SF PF++ +N
Sbjct: 1 MADFTVDLQSFKPP--FPFLDIDASMAAINQFTEVNQAIQLDNPIMNNFHSFTPFTS-NN 57
Query: 56 FF-----EFPGNLAENF-PGNFIQN--NMLPVCHTVTSTKCESK----NRKAVEISESSN 103
FF EFPGN A +F PG+F QN N++PV T T ES+ R+A+++SESS
Sbjct: 58 FFSHQAPEFPGNFAGSFLPGSFHQNDQNVMPVSQTFTIPAKESEFQESKRRAMDVSESSC 117
Query: 104 EDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRG 163
+S P +K++K+S R KRVK NE+EEEK++EVVHVRARRGQATDSHSLAERVRRG
Sbjct: 118 MNSYPRVSESGSKKRKSSRRGKRVKSNEEEEEKTREVVHVRARRGQATDSHSLAERVRRG 177
Query: 164 KINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
KINERLRCLQDIVPGCYKTMGM +MLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN+E+
Sbjct: 178 KINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNAET 237
Query: 224 DAVETMQKAKAYKAKEMERLMKEGNFACSSSSS 256
+A+ET+Q+AKA + KE++R M+EG+ + S S
Sbjct: 238 EAIETVQRAKAQETKELQRAMREGSGGLAQSHS 270
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 158/279 (56%), Positives = 197/279 (70%), Gaps = 21/279 (7%)
Query: 1 MADFAQDLQY---FRASSSFPFLDIDPNIEQINN----NLSVLDNTSLLNYQSFMPFSNP 53
MA+F +++Q S FPFL+IDP++E +N N VL+N++L + +PFS
Sbjct: 1 MAEFTENMQLQSNIIRPSQFPFLEIDPSMELLNQFIGMNQHVLENSNLSTMHNLVPFSC- 59
Query: 54 DNFF-----EFPGNLAENFPGNFIQNNMLPVCHTVTSTK---CESKNRKAVEISESSNED 105
D F EFPGNL ENFP + +N LPV + + E K RK+V++ E+S+ +
Sbjct: 60 DTFLGPQEPEFPGNLEENFPA-LVNHNALPVSLPIFQAENEIHEGKKRKSVDLPETSSAN 118
Query: 106 SSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKI 165
S+P +K K +SGR KRVK N EEEK+KEVVHVRARRGQATDSHSLAERVRRGKI
Sbjct: 119 STPAVSESGSKIKHSSGRGKRVKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKI 178
Query: 166 NERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDA 225
NE+LRCLQ+IVPGCYKTMGM +MLDEIINYVQSLQ+QVEFLS+KLTAASTFYDFNSE+DA
Sbjct: 179 NEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDA 238
Query: 226 VETMQKAKAYKAKEMERLMKEGNFACSSSSSFLTITRPL 264
+ETMQ+A+A +AKE+ + KEG SF PL
Sbjct: 239 LETMQRARASEAKELGKYKKEG----YGGVSFFQPAWPL 273
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 156/279 (55%), Positives = 199/279 (71%), Gaps = 22/279 (7%)
Query: 1 MADFAQDLQY---FRASSSFPFLDIDPNIEQINN----NLSVLDNTSLLNYQSFMPFSNP 53
MA+F +++Q R S FPFL+IDP++E +N N VL+N++L+ + +PFS
Sbjct: 1 MAEFTENMQLQSNIRPSQ-FPFLEIDPSMELLNQFLGMNQHVLENSNLIPMHNLVPFSC- 58
Query: 54 DNFF-----EFPGNLAENFPGNFIQNNMLPVCHTVTSTK---CESKNRKAVEISESSNED 105
D F E PGNL ENFP + + +N LP+ + + E K RK++++ E+S+ +
Sbjct: 59 DTFLGPQEPECPGNLEENFPAH-VNHNALPISLPIFQAENEIHEGKKRKSMDLPETSSAN 117
Query: 106 SSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKI 165
S+P +K K +SGR KRVK N EEEK+KEVVHVRARRGQATDSHSLAERVRRGKI
Sbjct: 118 STPAVSESGSKIKHSSGRGKRVKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKI 177
Query: 166 NERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDA 225
NE+LRCLQ+IVPGCYKTMGM +MLDEIINYVQSLQ+QVEFLS+KLTAASTFYDFNSE+DA
Sbjct: 178 NEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDA 237
Query: 226 VETMQKAKAYKAKEMERLMKEGNFACSSSSSFLTITRPL 264
+ETMQ+A+A +AKE+ + KEG SF PL
Sbjct: 238 LETMQRARASEAKELGKYKKEG----YGGVSFFQPAWPL 272
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 153/263 (58%), Positives = 189/263 (71%), Gaps = 12/263 (4%)
Query: 1 MADFAQDLQYFRASSSFPFLDIDPNIEQIN-----NNLSVLDNTSLLNYQSFMPFSNPDN 55
MA+F ++LQ SSFPFLDIDP++E +N N L VLDN++L+ Y SF F
Sbjct: 1 MAEFTENLQRI-GPSSFPFLDIDPSMELLNQFIGMNQLYVLDNSNLMPYFSFDTFLLGPQ 59
Query: 56 FFEFPGNLAENFPGNFIQ---NNMLPVCHTVTSTK---CESKNRKAVEISESSNEDSSPV 109
EFPGNL E+FP F NN LP+ + + E K RK++++ E+S+ +S+P
Sbjct: 60 EPEFPGNLEEDFPFLFNHVNHNNALPISLPIFQAENEIHEGKKRKSMDLPETSSVNSTPK 119
Query: 110 SEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERL 169
NK K +SGR KRVK N EEEK+KEVV+VRAR GQATDS +LAERVRRGKINE+L
Sbjct: 120 VSESGNKFKHSSGRGKRVKNNVTEEEKAKEVVNVRARSGQATDSRNLAERVRRGKINEKL 179
Query: 170 RCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETM 229
R LQ+IVPGCYKTMGM +MLDEIINYVQSLQNQVEFLS+KLTA STFYDFNSE DA+ETM
Sbjct: 180 RYLQNIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSLKLTAPSTFYDFNSEIDALETM 239
Query: 230 QKAKAYKAKEMERLMKEGNFACS 252
Q+A+A +AKE+ +EG C+
Sbjct: 240 QRARASEAKELGMYKREGYGGCA 262
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/260 (59%), Positives = 190/260 (73%), Gaps = 17/260 (6%)
Query: 1 MADFAQDLQYFRASSSFPFLDIDPNIEQINN----NLSVLDNTSLLNYQSFMPFSNPDNF 56
MA+F D Q R SS FPFLDID N+E +N+ N LDN S+LN Q+ M FS+ F
Sbjct: 1 MAEFTADWQSLRPSS-FPFLDID-NMELLNHLKGVNSHTLDN-SILNMQNLMQFSSGSFF 57
Query: 57 F----EFPGNLAENFPG--NFIQNNMLPVCHTVTSTKCESKNRKAVEISESSNEDSSP-V 109
EF GNL EN PG + N PV ++S + E + RKA +S S+ +S+P V
Sbjct: 58 CSSEPEFQGNLEENMPGLVHHFNQNAAPVSPPISSVENEGRKRKATNMSGPSSANSTPSV 117
Query: 110 SEIETNKRKKNSGRRKRVKGN--EKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINE 167
SE E+ K K SGR KRVK N E+E++KS +VVHVRARRGQATDSHSLAERVRRGKINE
Sbjct: 118 SESES-KIKNCSGRGKRVKKNMMEEEDKKSTQVVHVRARRGQATDSHSLAERVRRGKINE 176
Query: 168 RLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVE 227
+L+CLQ+IVPGCYKTMGM +MLDEIINYVQSLQ+QVEFLSMKLTAASTFYDFNSE +++E
Sbjct: 177 KLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTFYDFNSEINSLE 236
Query: 228 TMQKAKAYKAKEMERLMKEG 247
MQ+A+ +AKE+ + + EG
Sbjct: 237 AMQRARVSEAKELAKYVTEG 256
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/259 (56%), Positives = 179/259 (69%), Gaps = 32/259 (12%)
Query: 1 MADFAQDLQYFRASSSFPFLDIDPNIEQINNNLSVLDNTSLLNYQSFMPFSNPDNFF--- 57
MA+F DLQ R FPFLDID N + N+ MPFS ++F
Sbjct: 1 MAEFTADLQSLR----FPFLDID--------------NMEIQNF--MMPFSC-ESFLGSP 39
Query: 58 --EFPGNLAE-NFPG--NFIQNNMLPVCHTVTSTK---CESKNRKAVEISESSNEDSSPV 109
EFPGNL E NFP + +N +PV + S K E + RKA +I E S+ +S+P
Sbjct: 40 EAEFPGNLLEENFPALVQCVDHNEVPVLVPIGSVKNEIHEGQKRKATDICEPSSANSTPA 99
Query: 110 SEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERL 169
+K K +SGR KRVK N E++K EVVHVRA+RGQATDSHSLAERVRRGKINE+L
Sbjct: 100 VSESGSKTKNSSGRGKRVKRNSIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKL 159
Query: 170 RCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETM 229
RCLQ+IVPGCYKTMGM +MLDEIINYVQSLQ+QVEFLSMKLTAAST+YD NSESDA+ETM
Sbjct: 160 RCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTYYDLNSESDALETM 219
Query: 230 QKAKAYKAKEMERLMKEGN 248
Q+A+A + KE+ + ++EG+
Sbjct: 220 QRARASEVKELGKCVREGS 238
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/270 (54%), Positives = 182/270 (67%), Gaps = 30/270 (11%)
Query: 1 MADFAQDLQYFRASSSFPFLDIDPNIEQINNNLSVLDNTSLLNYQSFMPFSNPDNFF--- 57
MA+F DLQ R FPFLDID N+E N MPFS ++F
Sbjct: 1 MAEFTADLQSLR----FPFLDID-NMEMQN---------------LMMPFSC-ESFLGSP 39
Query: 58 --EFPGNLAENFPGNFIQNNMLPVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETN 115
EF GNL ENFP + ++P+ ++V + E + RKA +I E S+ +S+P +
Sbjct: 40 EAEFAGNLEENFPDHNEVPVLVPIINSVKNEIHEGQKRKATDIWEPSSANSTPAVFESGS 99
Query: 116 KRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDI 175
K K + GR KRVK N E++K EVVHVRA+RGQATDSHSLAERVRRGKINE+LRCLQ+I
Sbjct: 100 KTKNSCGRGKRVKRNMIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNI 159
Query: 176 VPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETMQKAKAY 235
VPGCYKTMGM +MLDEIINYVQSLQ+QVEFLSMKL AAST+YDFNSESD +ETMQ+A+A
Sbjct: 160 VPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLNAASTYYDFNSESDVLETMQRARAS 219
Query: 236 KAKEMERLMKEGNFACSSSSSF-LTITRPL 264
+ KE++R ++E C S F T + PL
Sbjct: 220 EVKELDRYVRE---ECEGVSCFEPTWSWPL 246
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/259 (57%), Positives = 187/259 (72%), Gaps = 30/259 (11%)
Query: 15 SSFPFLDIDPNIEQINNNLSVLDNTSLLNYQSFMPFS--NPDNFFEFPGNLAENFPGNFI 72
SSFP D PN+E + ++ S +S+ N+ F+PFS N + F +FP N EN +F
Sbjct: 8 SSFPLED--PNLELMASHFS----SSIPNFTHFLPFSTTNTEIFSQFPPNFPENNATSFT 61
Query: 73 QNNMLPVCHTV----------TSTKCE----SKNRKAV--EISESSNEDSSP-VSEIETN 115
+ +LP H+V T+T + RK++ ++SES++ S+P VSE N
Sbjct: 62 TSPVLP-SHSVFPPAPTPSVSTTTHHHFHDINNKRKSMPMDVSESTSGISTPQVSESGFN 120
Query: 116 KRKKNSGRRKRVKGNEKEEEKS-KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQD 174
K +SG+ KR+K EKEEEKS +EVVHVRARRGQATDSHSLAERVRRGKINERLRCL+D
Sbjct: 121 T-KYSSGKGKRLKSLEKEEEKSTREVVHVRARRGQATDSHSLAERVRRGKINERLRCLKD 179
Query: 175 IVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETMQKAKA 234
IVPGCYKTMGM +MLDEIINYVQSLQNQVEFLSMKL AAS+FYDFNSE+DA+ +Q+AKA
Sbjct: 180 IVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSFYDFNSEADAISKLQRAKA 239
Query: 235 YKAKEMERLMKE--GNFAC 251
++AKE+ERLMKE G AC
Sbjct: 240 HEAKELERLMKEGYGGIAC 258
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 148/270 (54%), Positives = 189/270 (70%), Gaps = 22/270 (8%)
Query: 1 MADFAQDLQYFRASSSFPFLDIDPNIEQINNNLSV------LDNTSLLNYQSFMPFSNPD 54
MA+ ++LQ R S FPFLDIDP++E ++ + + ++ +N Q+ MPFS D
Sbjct: 1 MAEITENLQSIRPS--FPFLDIDPSMELLSQFMGMNPQHVMDNSNMNMNMQNLMPFSC-D 57
Query: 55 NFF-----EFPGNLAENFPG--NFIQNNMLPVCHTVTSTK---CESKNRKAV-EISESSN 103
+ EFP NL FPG + + +N PV + + E K RK + +I E+S+
Sbjct: 58 SILGPEEPEFPENLEGTFPGLVHHVSHNAFPVSLPIFPAEDEIIEGKKRKMIMDIQETSS 117
Query: 104 EDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRG 163
+S+P ++ K NSGR KR K N EEEK KEVVHVRARRGQATDSHSLAERVRRG
Sbjct: 118 ANSTPAVSESGSRIKNNSGRGKRAKSNVTEEEKEKEVVHVRARRGQATDSHSLAERVRRG 177
Query: 164 KINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
KINE+LRCLQ+IVPGCYKTMGM +MLDEIINYVQSLQ+QVEFLS+KLTAAST+YDFNSE+
Sbjct: 178 KINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTYYDFNSET 237
Query: 224 DAVETMQKAKAYKAKEMERLMKE--GNFAC 251
DA+ETMQ+A+A +AKE+ R +E G +C
Sbjct: 238 DAIETMQRARASEAKELARYKREEYGGISC 267
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 142/251 (56%), Positives = 168/251 (66%), Gaps = 28/251 (11%)
Query: 1 MADFAQDLQYFRASSSFPFLDIDPNIEQINN-----NLSVLDNTSLLNYQSFMPFSNPDN 55
MADF DLQ F+ +SS+P + DPN I+ N DN SL N+Q+ +
Sbjct: 1 MADFTADLQGFK-TSSYPLFEADPNTGLISTQSTEQNQGFFDNPSL-NFQAL------ET 52
Query: 56 FF-----EFPGNLAENFPGNFIQNNMLPVCHTVTSTK---CESKNRKAV--EISESSNED 105
FF EFPGNL+E F Q +P+ S CE+K RKA SS
Sbjct: 53 FFSQQPPEFPGNLSEIFQ----QKVAVPMAQAEVSAGDSLCENKKRKARVDASESSSGNS 108
Query: 106 SSPVSEIETNKRKKNSGRRKR-VKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGK 164
S+P E + K +SGR KR +K EKE+EK +EVVHVRARRGQATDSHSLAERVRRGK
Sbjct: 109 STPACESGLKRGKNSSGRGKRAMKSIEKEDEKPREVVHVRARRGQATDSHSLAERVRRGK 168
Query: 165 INERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESD 224
INERLRCLQDIVPGCYKTMGM +MLDEIINYVQSLQNQVEFLSMKLTAAS +YDFNS++D
Sbjct: 169 INERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASQYYDFNSDTD 228
Query: 225 AVETMQKAKAY 235
+ET+Q+ K +
Sbjct: 229 TLETIQRGKVH 239
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 242 bits (618), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 147/263 (55%), Positives = 189/263 (71%), Gaps = 14/263 (5%)
Query: 1 MADFAQDLQYFRASSSFPFLDIDPNIEQIN-----NNLSVLDNTSLLNYQSFMPFSNPDN 55
MA+F ++LQ SSS PFLDIDP++E +N N L VLDN++L+ Y S F P
Sbjct: 1 MAEFTENLQ--NISSSSPFLDIDPSMELLNQFIGMNQLYVLDNSNLMPYFSCDTFLGPQE 58
Query: 56 FFEFPGNLAENFPGNF--IQNNMLPVCHTVTSTK---CESKNRKAVEISESSNEDSSPVS 110
EFPGNL E+FP F + +N PV + + E RK++++ E+S +S+
Sbjct: 59 P-EFPGNLEEDFPFLFHHVNHNAPPVSLPIFQAENEIHEGNKRKSMDLLETSFANSTSAV 117
Query: 111 EIETNKRKKNSGRRKRVKGN-EKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERL 169
+K K +SGR KR+K N +EEEK+KEVV+ RARRGQATDSH+LAERVRRGKINE+L
Sbjct: 118 SETGSKIKHSSGRGKRLKNNVTEEEEKAKEVVNARARRGQATDSHNLAERVRRGKINEKL 177
Query: 170 RCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETM 229
R LQ+IVPGCYKTM M +MLDEIINYVQSLQ+QVEFLS++LTAASTFYDFNSE DA ETM
Sbjct: 178 RYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQVEFLSLELTAASTFYDFNSEIDAFETM 237
Query: 230 QKAKAYKAKEMERLMKEGNFACS 252
Q+++AY+AKE+ + +EG+ S
Sbjct: 238 QRSRAYEAKELGKYKREGHGGVS 260
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 120/159 (75%), Positives = 143/159 (89%), Gaps = 2/159 (1%)
Query: 89 ESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRG 148
E+K RKA+++SESS+ +SSP ++ N + KN+ RR + +++++EK KEVVHVRARRG
Sbjct: 21 ETKKRKALDVSESSSFNSSP--QVSENGKGKNNSRRGKRTKSKEDDEKPKEVVHVRARRG 78
Query: 149 QATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
QATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM +MLDEIINYVQSLQNQVEFLSM
Sbjct: 79 QATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSM 138
Query: 209 KLTAASTFYDFNSESDAVETMQKAKAYKAKEMERLMKEG 247
KLTAASTFYDFNSE+DA+ETMQ+AKA +AKE+ER+MKEG
Sbjct: 139 KLTAASTFYDFNSETDAIETMQRAKAQEAKEIERVMKEG 177
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/264 (49%), Positives = 171/264 (64%), Gaps = 31/264 (11%)
Query: 1 MADFAQDLQYFRASSSFPFLDIDPNIEQINNNLSVLDNTSLLNYQSFMPFSNPDNFFE-- 58
MA+F ++ Q S PFLD D ++E +N ++N+++ + MPFS D+ E
Sbjct: 1 MAEFTENFQNI-IRPSLPFLDSDQSMELLN---QFMENSNMNMMHNLMPFS-CDSILEHH 55
Query: 59 -----FPGNLAENFPG----------NFIQNNMLPVCHTVTSTKCESKNRKAVEISESSN 103
FP NL ENF G N +Q ++ + E K RK ++ E+S+
Sbjct: 56 QQEHVFPRNLEENFHGLVHHVNNQNHNAVQLSLPTIFQEENKVHHEGKKRKMMDFQETSS 115
Query: 104 EDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRG 163
+S+P +K K + GR KRVK E EEEK+KEVVHVRARRGQATDSHSLAERVRRG
Sbjct: 116 GNSTPAVSESGSKTKLSGGRGKRVKSYETEEEKAKEVVHVRARRGQATDSHSLAERVRRG 175
Query: 164 KINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
KINE+L+CLQ+IVPGCYKTMGM +MLDEIINY FLS+KLTAAST+YDFNSE+
Sbjct: 176 KINEKLKCLQNIVPGCYKTMGMAVMLDEIINY---------FLSLKLTAASTYYDFNSEA 226
Query: 224 DAVETMQKAKAYKAKEMERLMKEG 247
D +ETMQ+A+A +AKE+ R ++G
Sbjct: 227 DDLETMQRARASEAKELARYKRDG 250
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 226 bits (576), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 144/264 (54%), Positives = 174/264 (65%), Gaps = 39/264 (14%)
Query: 20 LDIDPNIEQINNNLSVLDNTSLLNYQSFMP-FSN-PDNFF-------EFPGNLAEN---- 66
+D DP I Q L+ L NT L +Q+F P FS+ D+ F FPG EN
Sbjct: 14 MDDDP-ITQ----LAELSNT-LHQFQTFPPPFSSCLDSLFFHNQFPDHFPGKPLENNFHQ 67
Query: 67 ---FPGNFIQNNMLPVCHTVTSTKCESKNRKA----VEISESSNED-----SSPVSEIET 114
FP N IQNN +S++ ++K RK+ V SE+S D SS +
Sbjct: 68 GIFFPSN-IQNN------DKSSSRVDTKKRKSLMEGVSTSENSVSDQTLSSSSAQVSLNG 120
Query: 115 NKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQD 174
N KN+ R+ + +EEEK +EVVHVRARRGQATDSHS+AERVRRGKINERL+CLQD
Sbjct: 121 NSLTKNNSSRRGKRSKNREEEKDREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQD 180
Query: 175 IVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETMQKAKA 234
IVPGCYKTMGM MLDEIINYVQSLQNQVEFLSMKLTAAS++YDFNSE+DAVE+MQ+AKA
Sbjct: 181 IVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAVESMQRAKA 240
Query: 235 YKAKEMERLMKEGNFACSSSSSFL 258
+A EM + ++GN SSS L
Sbjct: 241 REAVEMGQ-GRDGNSVFHSSSWTL 263
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/264 (50%), Positives = 168/264 (63%), Gaps = 36/264 (13%)
Query: 1 MADFAQDLQYFRASSSFPFLDIDPNIEQINNNLSVLDNTSLLNYQSFMPFSNPDNFFEFP 60
MA+FA +LQ + SS L+++ N+E +NN S +N S +N FM FSN F
Sbjct: 1 MAEFAANLQSLKPSS----LEMNSNMELMNNR-SAPEN-SHMNGHGFMAFSN----VGFS 50
Query: 61 GNLAENFPGNFIQNNMLPVCHTVTSTKCESKNRKAVEISESSNE---------------- 104
+ + FP NF N PV + AV++ + S++
Sbjct: 51 IHHQQEFPVNFRDNTQSPV---------HAGGLSAVQVLQFSSQPGDFGQETKTGKVNFV 101
Query: 105 DSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGK 164
S P S E KN G RKR + NE+E K +EV+HVRA+RGQATDSHSLAERVRR K
Sbjct: 102 SSPPASGSEFLGDNKNLGGRKRKRSNERENNKPREVIHVRAKRGQATDSHSLAERVRREK 161
Query: 165 INERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN-SES 223
INE+LRCLQD+VPGCYKTMGM +MLD IINYVQSLQNQ+EFLSMKL+AASTFYDFN SE+
Sbjct: 162 INEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIEFLSMKLSAASTFYDFNSSEA 221
Query: 224 DAVETMQKAKAYKAKEMERLMKEG 247
+A+ETMQ AY+ E+ER +KEG
Sbjct: 222 EALETMQGTNAYEVHEVERSVKEG 245
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/266 (50%), Positives = 165/266 (62%), Gaps = 28/266 (10%)
Query: 1 MADFAQDLQYFRASSSFPFLDIDPNIEQINNNLSVLDNTSLLNYQSFMPFSNPDNFFEFP 60
MADF + Q + SS FP +DIDPN N NL+ LDN +L +SF F
Sbjct: 1 MADFTPNFQSLKPSS-FPLMDIDPNQ---NPNLNFLDNIPILFSESFFNNQTAVPSPRFL 56
Query: 61 GNLAENFPGNFIQNNMLPVCHTVTSTKCESKNRKAVEIS-------------ESSNEDSS 107
N ENF G F + + +S E KN ++ ESS+ +S+
Sbjct: 57 ENWGENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGSKKRKLENNDAYESSSGNST 116
Query: 108 P-VSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKIN 166
P VSE N + N ++ KG+ + EK +EVVHVRARRGQATDSHS+AER+RRGKIN
Sbjct: 117 PQVSENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKIN 176
Query: 167 ERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAV 226
ERLRCLQDIVPGCYKTMGM +MLDEIINYVQSLQNQVEFLSMKLTAAS+++DFNS+SDA
Sbjct: 177 ERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASSYHDFNSDSDAE 236
Query: 227 ETMQKAKAYKAKEMERLMKEGNFACS 252
+ + K KE ++EGN S
Sbjct: 237 DKL------KGKE----IREGNGGIS 252
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/222 (57%), Positives = 156/222 (70%), Gaps = 21/222 (9%)
Query: 42 LNYQSFMPFS-----------NPDNFFEFPGNLAENFPGNFIQNNMLP---VCHTVTSTK 87
L +Q+F PFS +P + PG +PG+ NN+ + H+ +
Sbjct: 38 LQFQTFPPFSTSLDSLFLHHRHPQQLHDLPGK----YPGS--DNNLSATSTLYHSSHNNV 91
Query: 88 CESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRR-KRVKGNEKEEEKSKEVVHVRAR 146
E+K RKA+ SS+E+SS ++ N K RR KR+K +EEEK +EVVHVRAR
Sbjct: 92 DETKKRKALLQPLSSSENSSVSDQLNINTTKTGCSRRGKRLKKKNQEEEKEREVVHVRAR 151
Query: 147 RGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
RGQATDSHSLAERVRRGKINERLRCLQDIVPGCYK+MGM MLDEIINYVQSLQNQVE L
Sbjct: 152 RGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQNQVELL 211
Query: 207 SMKLTAASTFYDFNSESDAVETMQKAKAYKAKEMERLMKEGN 248
SMKLTAAS+FYDFNSE+DAV++MQ+AKA +A EM R ++GN
Sbjct: 212 SMKLTAASSFYDFNSETDAVDSMQRAKAREAVEMGRQTRDGN 253
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/241 (50%), Positives = 153/241 (63%), Gaps = 35/241 (14%)
Query: 29 INNNLSVLDNTSL-----LNYQSFMPFSNPDNFFEFPGNLAENFPGNFIQNNMLPVCHTV 83
+N+N+ +++N S +N FM FSN F + + FP NF N PV
Sbjct: 1 MNSNMELMNNRSAPENSHMNGHGFMAFSN----VGFSIHHQQEFPVNFRDNTQSPV---- 52
Query: 84 TSTKCESKNRKAVEISESSNE----------------DSSPVSEIETNKRKKNSGRRKRV 127
+ AV++ + S++ S P S E KN G RKR
Sbjct: 53 -----HAGGLSAVQVLQFSSQPGDFGQETKTGKVNFVSSPPASGSEFLGDNKNLGGRKRK 107
Query: 128 KGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTM 187
+ NE+E K +EV+HVRA+RGQATDSHSLAERVRR KINE+LRCLQD+VPGCYKTMGM +
Sbjct: 108 RSNERENNKPREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAV 167
Query: 188 MLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN-SESDAVETMQKAKAYKAKEMERLMKE 246
MLD IINYVQSLQNQ+EFLSMKL+AASTFYDFN SE++A+ETMQ AY+ E+ER +KE
Sbjct: 168 MLDVIINYVQSLQNQIEFLSMKLSAASTFYDFNSSEAEALETMQGTNAYEVHEVERSVKE 227
Query: 247 G 247
G
Sbjct: 228 G 228
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 151/237 (63%), Gaps = 31/237 (13%)
Query: 28 QINNNLSVLDNTSLLNYQSFMPFSNPDNFFEFPGNLAENFPGNFIQNNMLPVCHTVTSTK 87
++ NN S +N S +N FM FSN F + + FP NF N PV
Sbjct: 2 ELMNNRSAPEN-SHMNGHGFMAFSN----VGFSIHHQQEFPVNFRDNTQSPV-------- 48
Query: 88 CESKNRKAVEISESSNE----------------DSSPVSEIETNKRKKNSGRRKRVKGNE 131
+ AV++ + S++ S P S E KN G RKR + NE
Sbjct: 49 -HAGGLSAVQVLQFSSQPGDFGQETKTGKVNFVSSPPASGSEFLGDNKNLGGRKRKRSNE 107
Query: 132 KEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDE 191
+E K +EV+HVRA+RGQATDSHSLAERVRR KINE+LRCLQD+VPGCYKTMGM +MLD
Sbjct: 108 RENNKPREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDV 167
Query: 192 IINYVQSLQNQVEFLSMKLTAASTFYDFN-SESDAVETMQKAKAYKAKEMERLMKEG 247
IINYVQSLQNQ+EFLSMKL+AASTFYDFN SE++A+ETMQ AY+ E+ER +KEG
Sbjct: 168 IINYVQSLQNQIEFLSMKLSAASTFYDFNSSEAEALETMQGTNAYEVHEVERSVKEG 224
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/270 (54%), Positives = 176/270 (65%), Gaps = 38/270 (14%)
Query: 14 SSSFPFLDIDPNIEQINNNLSVLDNTSLLNYQSFMP-FSNP-DNFF-------EFPGNLA 64
SS F +D I Q L+ L NT L ++Q+F P FS+ D+ F FPG
Sbjct: 5 SSDFQTFTMDDPIRQ----LAELSNT-LHHFQTFPPPFSSSLDSLFFHNQFPDHFPGKSL 59
Query: 65 EN-------FPGNFIQNNMLPVCHTVTSTKCESKNRK----AVEISESSNED-----SSP 108
EN FP N IQNN +S++ ++K RK AV SE+S D SS
Sbjct: 60 ENNFHQGIFFPSN-IQNN------EESSSQFDTKKRKSLMEAVSTSENSVSDQTLSTSSA 112
Query: 109 VSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINER 168
I N KN+ R+ + +EEEK +EVVHVRARRGQATDSHS+AERVRRGKINER
Sbjct: 113 QVSINGNISTKNNSSRRGKRSKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINER 172
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVET 228
L+CLQDIVPGCYKTMGM MLDEIINYVQSLQNQVEFLSMKLTAAS++YDFNSE+DAVE+
Sbjct: 173 LKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAVES 232
Query: 229 MQKAKAYKAKEMERLMKEGNFACSSSSSFL 258
MQKAKA +A EM + ++G+ SSS L
Sbjct: 233 MQKAKAREAVEMGQ-GRDGSSVFHSSSWTL 261
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/261 (54%), Positives = 177/261 (67%), Gaps = 31/261 (11%)
Query: 14 SSSFPFLDIDPNIEQINNNLSVLDNTSLLNYQSFMP-FSNP-DNFF-------EFPGNLA 64
SS F +D I Q L+ L NT L ++Q+F P FS+ D+ F FPG
Sbjct: 5 SSDFQTFTMDDPIRQ----LAELSNT-LHHFQTFPPPFSSSLDSLFFHNQFPDHFPGKSL 59
Query: 65 EN-------FPGNFIQNNMLPVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKR 117
EN FP N IQNN +S++ ++K RK++ + S++E+S + T+
Sbjct: 60 ENNFHQGIFFPSN-IQNN------EESSSQFDTKKRKSLMEAVSTSENSVSDQTLSTSSA 112
Query: 118 KKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVP 177
+ +S R KR +EEEK +EVVHVRARRGQATDSHS+AERVRRGKINERL+CLQDIVP
Sbjct: 113 QNSSRRGKR--SKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVP 170
Query: 178 GCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETMQKAKAYKA 237
GCYKTMGM MLDEIINYVQSLQNQVEFLSMKLTAAS++YDFNSE+DAVE+MQKAKA +A
Sbjct: 171 GCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAVESMQKAKAREA 230
Query: 238 KEMERLMKEGNFACSSSSSFL 258
EM + ++G+ SSS L
Sbjct: 231 VEMGQ-GRDGSSVFHSSSWTL 250
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 206 bits (524), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 146/270 (54%), Positives = 175/270 (64%), Gaps = 39/270 (14%)
Query: 14 SSSFPFLDIDPNIEQINNNLSVLDNTSLLNYQSFMP-FSNP-DNFF-------EFPGNLA 64
SS F +D I Q L+ L NT L ++Q+F P FS+ D+ F FPG
Sbjct: 5 SSDFQTFTMDDPIRQ----LAELSNT-LHHFQTFPPPFSSSLDSLFFHNQFPDHFPGKSL 59
Query: 65 EN-------FPGNFIQNNMLPVCHTVTSTKCESKNRK----AVEISESSNED-----SSP 108
EN FP N IQNN +S++ ++K RK AV SE+S D SS
Sbjct: 60 ENNFHQGIFFPSN-IQNN------EESSSQFDTKKRKSLMEAVSTSENSVSDQTLSTSSA 112
Query: 109 VSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINER 168
I N KN+ R+ + +EEEK +EVVHVRARRGQATDSHS+AERVRRGKINER
Sbjct: 113 QVSINGNISTKNNSSRRGKRSKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINER 172
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVET 228
L+CLQDIVPGCYKTMGM MLDEIINYVQSLQNQVEFLSMKLTAAS++YDFNSE+DAVE+
Sbjct: 173 LKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAVES 232
Query: 229 MQKAKAYKAKEMERLMKEGNFACSSSSSFL 258
MQ AKA +A EM + ++G+ SSS L
Sbjct: 233 MQ-AKAREAVEMGQ-GRDGSSVFHSSSWTL 260
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/245 (52%), Positives = 161/245 (65%), Gaps = 28/245 (11%)
Query: 20 LDIDPNIEQ---INNNLSVLDNTSLLNYQSFMPFSNP----------DNFFEFPGNLAEN 66
+DI +I Q +NNN S L++Q+F P S FPGN ++
Sbjct: 16 MDIYSSITQAADLNNN------NSNLHFQTFHPSSTSLESLFLHHHQQQLLHFPGNSPDS 69
Query: 67 FPGNFIQNNMLPVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSG---- 122
++ L H + E+K RKA+ + SS+E +S VS+ TN +G
Sbjct: 70 SNNFSSTSSFLHSDHNIVD---ETKKRKALLPTLSSSE-TSGVSD-NTNVIATETGSLRR 124
Query: 123 RRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKT 182
++ K E+E+EK +EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQD+VPGCYK
Sbjct: 125 GKRLKKKKEEEDEKEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKA 184
Query: 183 MGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETMQKAKAYKAKEMER 242
MGM MLDEIINYVQSLQNQVEFLSMKLTAAS+FYDFNSE+DAV++MQ+AKA + EM R
Sbjct: 185 MGMATMLDEIINYVQSLQNQVEFLSMKLTAASSFYDFNSETDAVDSMQRAKARETVEMGR 244
Query: 243 LMKEG 247
++G
Sbjct: 245 QTRDG 249
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/164 (67%), Positives = 132/164 (80%), Gaps = 6/164 (3%)
Query: 89 ESKNRKAVEISESSNEDSSPVSEIETNKRKKNSG----RRKRVKGNEKEEEKSKEVVHVR 144
E+K RKA+ + SS+E +S VS+ TN +G ++ K E+E+EK +EVVHVR
Sbjct: 983 ETKKRKALLPTLSSSE-TSGVSD-NTNVIATETGSLRRGKRLKKKKEEEDEKEREVVHVR 1040
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARRGQATDSHSLAERVRRGKINERLRCLQD+VPGCYK MGM MLDEIINYVQSLQNQVE
Sbjct: 1041 ARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVE 1100
Query: 205 FLSMKLTAASTFYDFNSESDAVETMQKAKAYKAKEMERLMKEGN 248
FLSMKLTAAS+FYDFNSE+DAV++MQ+AKA + EM R ++G+
Sbjct: 1101 FLSMKLTAASSFYDFNSETDAVDSMQRAKARETVEMGRQTRDGS 1144
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/248 (50%), Positives = 162/248 (65%), Gaps = 27/248 (10%)
Query: 20 LDIDPNIEQ---INNNLSVLDNTSLLNYQSFMPFSNP-DNFF-------------EFPGN 62
+DI +I Q +NNN S L ++Q+F P S D+ F FPGN
Sbjct: 894 MDIYSSITQAADLNNNYSNL------HFQAFHPSSTSLDSLFLHHHQHHHQQQLLRFPGN 947
Query: 63 LAENFPGNFIQNNMLPVCHTVTSTKCESKNRKAVEISESSNEDS--SPVSEIETNKRKKN 120
++ + ++ H+ + E K RKA+ + SS+E+S S + + T +
Sbjct: 948 SPDDN--SNNFSSTSSFLHSDHNNVDEPKKRKALLHTMSSSENSGVSDNTNVITTETGSL 1005
Query: 121 SGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCY 180
++ K E+E+EK +EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQD+VPGCY
Sbjct: 1006 RRGKRLKKKKEEEDEKEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCY 1065
Query: 181 KTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETMQKAKAYKAKEM 240
K MGM MLDEIINYVQSLQNQVEFLSMKL AAS+FYDF+SE+DAV++MQ+AKA + EM
Sbjct: 1066 KAMGMATMLDEIINYVQSLQNQVEFLSMKLNAASSFYDFSSETDAVDSMQRAKARETVEM 1125
Query: 241 ERLMKEGN 248
R ++G+
Sbjct: 1126 GRQTRDGS 1133
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/263 (42%), Positives = 167/263 (63%), Gaps = 17/263 (6%)
Query: 1 MADFAQDLQYFRASSSFPFLDIDPNIEQINN----NLSVLDNTSLLNY--QSFMPFSNPD 54
MA+FA+ Q FR S + +D N+E + + N S+L++ S+ ++ S + P+
Sbjct: 1 MAEFAEYQQRFRPSQPLTEM-MDMNMEMLKHLPEMNPSILESFSITDFSADSLLARQQPE 59
Query: 55 NFFEFPG-NLAENFPGNFIQNNMLPVCHTVT---STKCESKNRKAVEISESSNEDSSPVS 110
+ NL+ F + + + V HTVT + +SK RK++E S SS SP +
Sbjct: 60 FTATYDHKNLSSTFHPDIL--STATVVHTVTLNQNDSHDSKKRKSMEQSTSSY--ISPTA 115
Query: 111 EIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLR 170
K+K N G K+ + EKE +K++EV+HVRA+RGQATDSHS+AERVRR KIN +LR
Sbjct: 116 STNETKKKNNLGGSKKGENKEKEGDKAEEVIHVRAKRGQATDSHSIAERVRREKINNKLR 175
Query: 171 CLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETMQ 230
CLQD+VPGC+++MGM +ML+EIINYV SLQNQVEFLSM+L AAS+ D N+ +++ + Q
Sbjct: 176 CLQDLVPGCHRSMGMAVMLEEIINYVHSLQNQVEFLSMELAAASSSNDLNNLTESSKRAQ 235
Query: 231 KAKAYKAKEMERLMKE--GNFAC 251
+ +A++ ++ ++E G C
Sbjct: 236 GTDSTEAQKTQKWLRERYGEITC 258
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/263 (43%), Positives = 169/263 (64%), Gaps = 20/263 (7%)
Query: 1 MADFAQDLQYFRASSSFPFLDIDPNIEQINN----NLSVLDNTSL--LNYQSFMPFSNPD 54
+ DF+ +Q FR S PFL +D +E +N N +L+N ++ ++ ++ + P+
Sbjct: 48 IVDFSDSMQSFRPSQ--PFLGMDVTMEMVNQFAEMNPIMLENFNITDVSVENLLAHQQPE 105
Query: 55 NFFEFPGNLAENFPGNFIQNNMLPVCHTVTSTK---CESKNRKAVE------ISESSNED 105
F NL +F N + + +PV ++ S+ ESK RK +E + SS
Sbjct: 106 LMGTFAYNLQSSFESNGLSS--MPVVQSMPSSGNAFHESKRRKVMEQSKSSSENISSMAS 163
Query: 106 SSPVSEIETNKRKKNSGRRKRVKGNEKEE-EKSKEVVHVRARRGQATDSHSLAERVRRGK 164
S + EI + K+K N G+ K+ + ++KE +K EV+HVRARRGQATD+HS+AERVRR K
Sbjct: 164 GSGLKEISSTKKKNNLGKGKKGRNSDKELLDKPDEVIHVRARRGQATDNHSIAERVRREK 223
Query: 165 INERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESD 224
I RLRCLQD+VPGCYK GM +MLDEIINYV SLQNQVEFLS +L AAS+ ++FNSE++
Sbjct: 224 IKTRLRCLQDLVPGCYKNKGMAVMLDEIINYVHSLQNQVEFLSRELAAASSLHNFNSETE 283
Query: 225 AVETMQKAKAYKAKEMERLMKEG 247
A++ Q ++ +EME+++++G
Sbjct: 284 AIKNAQGTNTHEGQEMEKIVRKG 306
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 135/187 (72%), Gaps = 7/187 (3%)
Query: 78 PVCHTVTSTKC----ESKNRKAVEISESSNEDSSPVSEIETNKRKKNS-GRRKRVKGNEK 132
P+ HTV S++ +SK RK S SS+++ SP + TN ++KN+ GR K+ K EK
Sbjct: 79 PIVHTVDSSQYVIFRDSKKRKVEAQSTSSSKNVSPTTSTTTNTKQKNNLGRDKKGKNKEK 138
Query: 133 EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEI 192
E EK++EV+HVRA+RGQATDSHS+AERVRR KIN +LRCLQD+VPGC+K+MGM +ML+EI
Sbjct: 139 EVEKAEEVIHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEI 198
Query: 193 INYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETMQKAKAYKAKEMERLMKE--GNFA 250
INYV SLQNQVEFLSM+L AAS YD N E+++ + Q + +E ++ ++E G+
Sbjct: 199 INYVHSLQNQVEFLSMELAAASCSYDLNLETESSKKAQVTSSAGTQETQKWLRERYGDLG 258
Query: 251 CSSSSSF 257
C S++
Sbjct: 259 CCYQSTW 265
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/118 (66%), Positives = 95/118 (80%), Gaps = 1/118 (0%)
Query: 130 NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
N E +K K+VVHVRA+RGQATDSHSLAERVRR KINERL+CLQD+VPGCYK MGM +ML
Sbjct: 91 NGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVML 150
Query: 190 DEIINYVQSLQNQVEFLSMKLTAASTFYDFNS-ESDAVETMQKAKAYKAKEMERLMKE 246
D II+YV+SLQNQ+EFLSMKL+AAS YD NS + + + Q + A EMER+++E
Sbjct: 151 DVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQGGNIHSAAEMERILRE 208
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/118 (66%), Positives = 95/118 (80%), Gaps = 1/118 (0%)
Query: 130 NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
N E +K K+VVHVRA+RGQATDSHSLAERVRR KINERL+CLQD+VPGCYK MGM +ML
Sbjct: 91 NGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVML 150
Query: 190 DEIINYVQSLQNQVEFLSMKLTAASTFYDFNS-ESDAVETMQKAKAYKAKEMERLMKE 246
D II+YV+SLQNQ+EFLSMKL+AAS YD NS + + + Q + A EMER+++E
Sbjct: 151 DVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQGGNIHSAAEMERILRE 208
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 117/279 (41%), Positives = 166/279 (59%), Gaps = 30/279 (10%)
Query: 1 MADFAQDLQYFRASSSFPFLDI-DPNIEQINN----NLSVLDNTSL---LNYQSFMPFSN 52
MA+FA+ LQ R +S P ++ D N+E + + N S+L+N S+ + SF
Sbjct: 1 MAEFAEYLQ--RLGASQPLTEMMDMNMEMLKHLPELNPSILENFSITHDFSADSFFAHQQ 58
Query: 53 PDNFFEFPGNLAENFPGNFIQNNML---PVCHTVTSTK---CESKNRKAVEISESSNEDS 106
P EFP N + ++L P+ H+V+ + E K KA+E S S+++
Sbjct: 59 P----EFPATYNHNKLSSTSHPHILSTAPLVHSVSLNQNVFHERKKPKAMEQSTGSSKNV 114
Query: 107 SPVSEIETNKRKK-------NSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAER 159
SP + I ++K R K+ K EKE +KSKEV+HVRA+RGQATDSHS+AER
Sbjct: 115 SPTASINITEKKNILTPSLCAKRRGKKGKNKEKEGDKSKEVIHVRAKRGQATDSHSIAER 174
Query: 160 VRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDF 219
+RR KIN +LRCLQDIVPGC+K+MGM +ML+EIINYV SLQNQVEFLSM+L AAS D
Sbjct: 175 IRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVHSLQNQVEFLSMELAAASCSNDL 234
Query: 220 NSESDAVETMQKAKAY-KAKEMERLMKE--GNFACSSSS 255
+ +++ + Q + A+E ++ +E G C S+
Sbjct: 235 KNLTESSKKAQGTNSTDDAQETQKWSRERYGEITCFHST 273
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/118 (66%), Positives = 95/118 (80%), Gaps = 1/118 (0%)
Query: 130 NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
N E +K K+VVHVRA+RGQATDSHSLAERVRR KINERL+CLQD+VPGCYK MGM +ML
Sbjct: 34 NGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVML 93
Query: 190 DEIINYVQSLQNQVEFLSMKLTAASTFYDFNS-ESDAVETMQKAKAYKAKEMERLMKE 246
D II+YV+SLQNQ+EFLSMKL+AAS YD NS + + + Q + A EMER+++E
Sbjct: 94 DVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQGGNIHSAAEMERILRE 151
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/244 (44%), Positives = 152/244 (62%), Gaps = 25/244 (10%)
Query: 8 LQYFRASSSFPFLDIDPNIEQINN----NLSVLDNTSL--LNYQSFMPFSNPDNFFEFPG 61
+Q FR S PFL +D +E +N N +L+N ++ ++ + + P+ F
Sbjct: 1 MQSFRPSQ--PFLGMDVTMEMVNQFAEMNPIMLENFNITDVSVEXLLAHQQPELMGTFAY 58
Query: 62 NLAENFPGNFIQNNMLPVCHTVTSTK---CESKNRKAVE------ISESSNEDSSPVSEI 112
NL +F N + + +PV ++ S+ ESK RK +E + SS S + EI
Sbjct: 59 NLQSSFESNGLSS--MPVVQSMPSSGNAFHESKRRKVMEQSKSSSENISSMASGSGLKEI 116
Query: 113 ETNKRKKNSGRRKRVKGNEKEE-EKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRC 171
+ K+K N G+ K+ + ++KE +K EV+HVRARRGQATD+HS+AERVRR KI RLRC
Sbjct: 117 SSTKKKNNLGKGKKGRNSDKELLDKPDEVIHVRARRGQATDNHSIAERVRREKIKTRLRC 176
Query: 172 LQDIVPGCYKTM-----GMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAV 226
LQD+VPGCYK GM +MLDEIINYV SLQNQVEFLS +L AAS+ ++FNSE++A+
Sbjct: 177 LQDLVPGCYKVYDPQNKGMAVMLDEIINYVHSLQNQVEFLSRELAAASSLHNFNSETEAI 236
Query: 227 ETMQ 230
+ Q
Sbjct: 237 KNAQ 240
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/143 (53%), Positives = 95/143 (66%), Gaps = 3/143 (2%)
Query: 78 PVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKS 137
P T + ++ N K ++ +E ++SPV E K SG + K N + E
Sbjct: 296 PASATKDAETDDNSNTKRIKPNEGEENENSPVKAEE---EPKGSGDDIQNKANSRPPEPP 352
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
K+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQ
Sbjct: 353 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 412
Query: 198 SLQNQVEFLSMKLTAASTFYDFN 220
SLQ QVEFLSMKL + +T DFN
Sbjct: 413 SLQRQVEFLSMKLASVNTRLDFN 435
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 87/121 (71%)
Query: 103 NEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRR 162
NE+ +E E+ N+ K+ K N K E K+ +HVRARRGQATDSHSLAERVRR
Sbjct: 345 NENGQVKAEEESKGGNSNANDEKQNKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRR 404
Query: 163 GKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL + +T DF+ E
Sbjct: 405 EKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFSIE 464
Query: 223 S 223
S
Sbjct: 465 S 465
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/115 (60%), Positives = 86/115 (74%), Gaps = 1/115 (0%)
Query: 110 SEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERL 169
+E + K +NS ++ K N K E K+ +HVRARRGQATDSHSLAERVRR KI+ER+
Sbjct: 183 TEEDLKKNDENSAEERQTKANSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERM 242
Query: 170 RCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAA-STFYDFNSES 223
+ LQD+VPGC K G +MLDEIINYVQSLQ+QVEFLSMKL + +T DFN +S
Sbjct: 243 KLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKLASVNTTRVDFNVDS 297
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 91/130 (70%), Gaps = 3/130 (2%)
Query: 94 KAVEISESSNEDSSPVSE---IETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQA 150
K E+ ++SN S +E ++ + K +G K+ K + K E K+ +HVRARRGQA
Sbjct: 298 KDAEVDDNSNAKRSKGNEKNDVKAEEEHKGNGDDKQNKASTKPPEPPKDYIHVRARRGQA 357
Query: 151 TDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKL 210
TDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 358 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKL 417
Query: 211 TAASTFYDFN 220
+ +T D N
Sbjct: 418 ASVNTRLDIN 427
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 93/142 (65%), Gaps = 13/142 (9%)
Query: 95 AVEISESSNEDSSPVSEIETNKRKK-------------NSGRRKRVKGNEKEEEKSKEVV 141
A E S+ SN S +E E N+ + N+ K+ K N K E K+ +
Sbjct: 325 AAEASDDSNAKRSKPNEGEGNENGQVKAEEESKGGNNSNANDEKQNKSNSKPPEPPKDYI 384
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ
Sbjct: 385 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 444
Query: 202 QVEFLSMKLTAASTFYDFNSES 223
QVEFLSMKL + +T DF+ ES
Sbjct: 445 QVEFLSMKLASVNTRLDFSIES 466
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 93/140 (66%), Gaps = 1/140 (0%)
Query: 82 TVTSTKCESKNRKAVEISESSN-EDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEV 140
+ +TK ES ++ ES+ E++S + N G+++ G K E K+
Sbjct: 190 STAATKEESSGKRCKSAEESNGAEENSGKGKAAAQSNSDNGGKKQGKDGASKPPEPPKDY 249
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+HVRARRG+ATDSHSLAERVRR KI++R++ LQD+VPGC K +G +MLDEIINYVQSLQ
Sbjct: 250 IHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQ 309
Query: 201 NQVEFLSMKLTAASTFYDFN 220
QVEFLSMKL + DFN
Sbjct: 310 RQVEFLSMKLATVNPQLDFN 329
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Query: 119 KNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
+NS K+ K N K E K+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPG
Sbjct: 230 ENSAEEKQTKANSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPG 289
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAA-STFYDFNSES 223
C K G +MLDEIINYVQSLQ+QVEFLSMKL + +T DFN +S
Sbjct: 290 CNKVTGKALMLDEIINYVQSLQHQVEFLSMKLASVNTTRVDFNVDS 335
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 123/210 (58%), Gaps = 14/210 (6%)
Query: 18 PFLDIDPNIEQINNNLSVLDNTSLLNYQSFMPFSNPDNFFEFPGNLAENFPGNFIQNNML 77
P +++ I+Q N+L L N S + SF PF + E+ + EN G Q N
Sbjct: 25 PSINLTGFIDQ--NHLHPLPNISTVEDISFNPFLD-----EYNVDRPEN-SGLEKQANTT 76
Query: 78 PVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKS 137
T S+ C+ + I + + VS N ++ G + + + +EE
Sbjct: 77 KTA-TTRSSSCDHGSSAITTIGKKRGRKARNVS----NSKEGVEGTKSKKQKRGSKEEPP 131
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
K+ +HVRARRGQATDSHSLAERVRR KI+ER+R LQ++VPGC K G +MLDEIINYVQ
Sbjct: 132 KDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQ 191
Query: 198 SLQNQVEFLSMKLTAAS-TFYDFNSESDAV 226
+LQNQVEFLSMKLT+ S YDF S+ D +
Sbjct: 192 TLQNQVEFLSMKLTSISPVVYDFGSDLDGL 221
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 94/136 (69%), Gaps = 1/136 (0%)
Query: 92 NRKAVEISESS-NEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQA 150
N K ++ +E NE+ E E + N+G K+ K + K E K+ +HVRARRGQA
Sbjct: 239 NAKKIKANEGERNENGVRNMEEEIKEGTPNAGEEKQNKSDSKPPEPQKDYIHVRARRGQA 298
Query: 151 TDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKL 210
TDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 299 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKL 358
Query: 211 TAASTFYDFNSESDAV 226
++ +T D + ES V
Sbjct: 359 SSVNTKMDLSIESLVV 374
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 133/248 (53%), Gaps = 45/248 (18%)
Query: 19 FLD--IDPNIE----QINNNLSVL-DNTSLLNYQSFMPFSNPDNFFEFPGNLAENFPGNF 71
FLD I PNI +NN++ D +N SF P+ F E P ++ + +
Sbjct: 12 FLDSVILPNITTPIMNMNNSMYWFYDEAGGINTNSFYQVYPPETFHEAPLDVRFHEFSHH 71
Query: 72 IQNNMLPVCHTVTS-TKCESKNRKAV----EISESSNEDSSPVSEIETNKRKKNSG---- 122
++ + + TS TK +S V E E ++ +PV KRK +G
Sbjct: 72 DHSSKVSLSDNETSLTKKQSTGSSTVVDKLETGEQVTQEVTPVDR----KRKTTNGSLNS 127
Query: 123 ------------RRKRVKGNEKEEEKSKEVV------------HVRARRGQATDSHSLAE 158
R+K+ +G+ K+EEK + V HVRARRGQATDSHSLAE
Sbjct: 128 AQSKDVKEVKSKRQKKCRGDMKQEEKRPKAVKKVPEEPPTGYVHVRARRGQATDSHSLAE 187
Query: 159 RVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAST-FY 217
RVRR KI+ER++ LQ +VPGC K G +MLDEIINYVQSLQNQVEFLSMKL + + FY
Sbjct: 188 RVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFY 247
Query: 218 DFNSESDA 225
DF E DA
Sbjct: 248 DFGMELDA 255
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/143 (54%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 83 VTSTKCES--KNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEV 140
V S K ES K K E S S + + +E + + G +K+ K N K E K+
Sbjct: 201 VASDKDESNAKRSKPDEGSGSEKDAAKAKAEANGSTKSAGDGNQKQSKDNPKPPEAPKDY 260
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ
Sbjct: 261 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 320
Query: 201 NQVEFLSMKLTAASTFYDFNSES 223
QVEFLSMKL + DFN E+
Sbjct: 321 RQVEFLSMKLATVNPRMDFNMEA 343
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/143 (54%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 83 VTSTKCES--KNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEV 140
V S K ES K K E S S + + +E + + G +K+ K N K E K+
Sbjct: 310 VASDKDESNAKRSKPDEGSGSEKDAAKAKAEANGSTKSAGDGNQKQSKDNPKPPEAPKDY 369
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ
Sbjct: 370 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 429
Query: 201 NQVEFLSMKLTAASTFYDFNSES 223
QVEFLSMKL + DFN E+
Sbjct: 430 RQVEFLSMKLATVNPRMDFNMEA 452
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/143 (54%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 83 VTSTKCES--KNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEV 140
V S K ES K K E S S + + +E + + G +K+ K N K E K+
Sbjct: 310 VASDKDESNAKRSKPDEGSGSEKDAAKAKAEANGSTKSAGDGNQKQSKDNPKPPEAPKDY 369
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ
Sbjct: 370 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 429
Query: 201 NQVEFLSMKLTAASTFYDFNSES 223
QVEFLSMKL + DFN E+
Sbjct: 430 RQVEFLSMKLATVNPRMDFNMEA 452
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 92/140 (65%), Gaps = 1/140 (0%)
Query: 82 TVTSTKCESKNRKAVEISESSN-EDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEV 140
+ +TK ES ++ ES+ E++S + N G+++ G K E K+
Sbjct: 190 STAATKEESSGKRCKSAEESNGAEENSGKGKAAAQSNSDNGGKKQGKDGASKPPEPPKDY 249
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+H RARRG+ATDSHSLAERVRR KI++R++ LQD+VPGC K +G +MLDEIINYVQSLQ
Sbjct: 250 IHFRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQ 309
Query: 201 NQVEFLSMKLTAASTFYDFN 220
QVEFLSMKL + DFN
Sbjct: 310 RQVEFLSMKLATVNPQLDFN 329
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 95/140 (67%), Gaps = 5/140 (3%)
Query: 87 KCESKNRKAVEISESSN-EDSSPVSEIETNKRKKNSGRRKRVKGNE----KEEEKSKEVV 141
K ES ++ ESS ED++P ++ + + +G ++ +G E E K+ +
Sbjct: 219 KEESSGKRCRSADESSGAEDNNPTTKGKAAQSSSENGGGRKQQGKESATKPPAEAPKDYI 278
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
HVRARRG+ATDSHSLAERVRR KI++R++ LQD+VPGC K +G +MLDEIINYVQSLQ
Sbjct: 279 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 338
Query: 202 QVEFLSMKLTAASTFYDFNS 221
QVEFLSMKL + DFNS
Sbjct: 339 QVEFLSMKLATVNPQLDFNS 358
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 84/113 (74%), Gaps = 1/113 (0%)
Query: 115 NKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQD 174
N ++ GR+ + + +EE + +HVRARRGQATDSHSLAERVRR KI+ER+R LQ+
Sbjct: 108 NSKEGVEGRKSKKQKRGSKEEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQN 167
Query: 175 IVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAV 226
+VPGC K G +MLDEIINYVQ+LQ QVEFLSMKLT+ S YDF S+ D +
Sbjct: 168 LVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVYDFGSDLDGL 220
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 95/137 (69%), Gaps = 11/137 (8%)
Query: 90 SKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEV------VHV 143
S+ RKA + ++S SP EIE +K KR K +E +K+K + +HV
Sbjct: 204 SRKRKA-KSKQNSPSTVSPSKEIE----EKEDSDPKRCKKSEDNGDKTKSIDPYKDYIHV 258
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QV
Sbjct: 259 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 318
Query: 204 EFLSMKLTAASTFYDFN 220
EFLSMKL++ +T DFN
Sbjct: 319 EFLSMKLSSVNTRLDFN 335
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 93/120 (77%), Gaps = 8/120 (6%)
Query: 115 NKRKKNSGRRKRV--KGNEKEEEKSKE-----VVHVRARRGQATDSHSLAERVRRGKINE 167
N+++ ++G++K++ K K+E+K+ E +HVRARRGQATDSHSLAERVRR KI+E
Sbjct: 118 NEKQGDNGKKKKINSKLVAKDEKKANEEAPTGYIHVRARRGQATDSHSLAERVRREKISE 177
Query: 168 RLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAV 226
R++ LQ +VPGC K G +MLDEIINYVQSLQNQVEFLSMKLT+ + +YDF + DA+
Sbjct: 178 RMKILQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLTSLNPMYYDFGMDLDAL 237
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/146 (52%), Positives = 94/146 (64%), Gaps = 5/146 (3%)
Query: 93 RKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEK----EEEKSKEVVHVRARRG 148
RK +E S SSP + + K G+R R + EK E+E SK +HVRARRG
Sbjct: 77 RKRKATAEDSAAISSPQPKDCKQESKSRRGKRPRKETEEKSSTDEDEASKGYIHVRARRG 136
Query: 149 QATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
QATDSHSLAERVRR +I+ER+R LQ +VPGC K G M+LDEIINYVQSLQNQVEFLSM
Sbjct: 137 QATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKAMVLDEIINYVQSLQNQVEFLSM 196
Query: 209 KLTAAS-TFYDFNSESDAVETMQKAK 233
++ + S Y F + S+ + K
Sbjct: 197 RIASMSPVLYGFGTNSEGLHDHHAPK 222
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 93/143 (65%)
Query: 78 PVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKS 137
P+ + K K+ E S ++ E++S + + + G+++ + K E
Sbjct: 212 PMSTSAAKEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSSKPPEPP 271
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
K+ +HVRARRG+ATDSHSLAERVRR KI++R++ LQD+VPGC K +G +MLDEIINYVQ
Sbjct: 272 KDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQ 331
Query: 198 SLQNQVEFLSMKLTAASTFYDFN 220
SLQ QVEFLSMKL + DFN
Sbjct: 332 SLQRQVEFLSMKLATVNPQLDFN 354
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 94/138 (68%), Gaps = 6/138 (4%)
Query: 91 KNRKAVEISESSNEDSSPVSEIETNKRKKNSGRR-KRVKGNEKEEEKSKEVVHVRARRGQ 149
+ RKA ++++ S+ +S + K RR KR K + +EE K +HVRARRGQ
Sbjct: 76 RKRKA----STADDSSATLSSAHSKDCKDGKSRRGKREKSSTDQEEAPKGYIHVRARRGQ 131
Query: 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMK 209
ATDSHSLAERVRR +I+ER+R LQ +VPGC K G ++LDEIINYVQSLQNQVEFLSM+
Sbjct: 132 ATDSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMR 191
Query: 210 LTAAS-TFYDFNSESDAV 226
+ + S Y F +SD +
Sbjct: 192 IASMSPVLYGFGLDSDGL 209
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/135 (56%), Positives = 91/135 (67%), Gaps = 5/135 (3%)
Query: 94 KAVEISESSNEDSSPVSEIETNKR-----KKNSGRRKRVKGNEKEEEKSKEVVHVRARRG 148
K VE SE SN S +E N + + + K+ K N K E K+ +HVRARRG
Sbjct: 318 KGVEGSEYSNSKRSKPNEGNENGQVKVEEESKAEEEKQSKSNSKPPEPPKDYIHVRARRG 377
Query: 149 QATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
QATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSM
Sbjct: 378 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 437
Query: 209 KLTAASTFYDFNSES 223
KL + +T D + ES
Sbjct: 438 KLASVNTRMDLSIES 452
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 98/145 (67%), Gaps = 5/145 (3%)
Query: 82 TVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVV 141
V T + K RK E ++++ +S+ E + N RK+ + R ++ EEE + +
Sbjct: 50 VVLDTSPQDKKRKPRE-EDTASLNSAHSKEAKENGRKRGGKKHSR---DQMEEEAPQGFI 105
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
HVRARRGQATDSHSLAERVRR +I+ER+R LQ +VPGC K G ++LDEIINYVQSLQN
Sbjct: 106 HVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQN 165
Query: 202 QVEFLSMKLTAAS-TFYDFNSESDA 225
QVEFLSM++ + S Y F +SDA
Sbjct: 166 QVEFLSMRIASLSPVLYGFGIDSDA 190
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 77/99 (77%)
Query: 125 KRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMG 184
K VK N K E K+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G
Sbjct: 355 KSVKENTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 414
Query: 185 MTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
+MLDEIINYVQSLQ QVEFLSMKL A + +FN ES
Sbjct: 415 KAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRLEFNVES 453
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/102 (63%), Positives = 80/102 (78%)
Query: 122 GRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYK 181
G K+ + K E K+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K
Sbjct: 269 GDEKQNMSSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 328
Query: 182 TMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
G +MLDEIINYV+SLQ QVEFLSMKL++ +T DF++ES
Sbjct: 329 VTGKALMLDEIINYVRSLQRQVEFLSMKLSSVNTRLDFSTES 370
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 87/135 (64%)
Query: 86 TKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRA 145
K ES ++ ES+ + + +N G+++ K E K+ +HVRA
Sbjct: 223 AKEESGGKRCKSADESNGAEDNSTKGKAAQSNSENGGKKQGKDSTSKPPEPPKDYIHVRA 282
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RRG+ATDSHSLAERVRR KI++R++ LQD+VPGC K +G +MLDEIINYVQSLQ QVEF
Sbjct: 283 RRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 342
Query: 206 LSMKLTAASTFYDFN 220
LSMKL + DFN
Sbjct: 343 LSMKLATVNPQLDFN 357
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 80/102 (78%), Gaps = 6/102 (5%)
Query: 125 KRVKGNEKEEEKSKEV------VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
KR K +E+ +K+K + +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPG
Sbjct: 228 KRCKKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPG 287
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
C K G +MLDEIINYVQSLQ QVEFLSMKL++ +T DFN
Sbjct: 288 CNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFN 329
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 80/102 (78%), Gaps = 6/102 (5%)
Query: 125 KRVKGNEKEEEKSKEV------VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
KR K +E+ +K+K + +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPG
Sbjct: 234 KRCKKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPG 293
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
C K G +MLDEIINYVQSLQ QVEFLSMKL++ +T DFN
Sbjct: 294 CNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFN 335
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 80/102 (78%), Gaps = 6/102 (5%)
Query: 125 KRVKGNEKEEEKSKEV------VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
KR K +E+ +K+K + +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPG
Sbjct: 234 KRCKKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPG 293
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
C K G +MLDEIINYVQSLQ QVEFLSMKL++ +T DFN
Sbjct: 294 CNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFN 335
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 77/99 (77%)
Query: 125 KRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMG 184
K VK N K E K+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G
Sbjct: 40 KSVKENTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 99
Query: 185 MTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
+MLDEIINYVQSLQ QVEFLSMKL A + +FN ES
Sbjct: 100 KAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRLEFNVES 138
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 91/136 (66%), Gaps = 7/136 (5%)
Query: 94 KAVEISESSNEDSSPVSEIETNKRKK-------NSGRRKRVKGNEKEEEKSKEVVHVRAR 146
K VE SE SN S +E + N+ + + K+ K N K E K+ +HVRAR
Sbjct: 283 KGVEGSEDSNSKRSKPNEGDGNENGQVKVEEESKAEEEKQNKSNSKPPEPPKDYIHVRAR 342
Query: 147 RGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
RGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFL
Sbjct: 343 RGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 402
Query: 207 SMKLTAASTFYDFNSE 222
SMKL + +T D + E
Sbjct: 403 SMKLASVNTRMDLSIE 418
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 83/112 (74%), Gaps = 3/112 (2%)
Query: 118 KKNSGRRKRVKGNEKE--EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDI 175
KKN K V +EK+ EE +HVRARRGQATDSHSLAERVRR KI+ER++ LQ +
Sbjct: 137 KKNKSNSKLVAKDEKKANEEAPTGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSL 196
Query: 176 VPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAV 226
VPGC K G +MLDEIINYVQSLQNQVEFLSMKL + + +YDF + DA+
Sbjct: 197 VPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNPMYYDFGMDLDAL 248
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 86/125 (68%), Gaps = 8/125 (6%)
Query: 99 SESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAE 158
S+ E+SSP + T R K G ++ G+EKE+ +HVRARRGQAT+SHSLAE
Sbjct: 205 SKDKGEESSPATGTTTGGRSKGKGAKE---GSEKED-----YIHVRARRGQATNSHSLAE 256
Query: 159 RVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYD 218
R+RR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL + D
Sbjct: 257 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD 316
Query: 219 FNSES 223
N E
Sbjct: 317 LNIEG 321
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/109 (61%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
Query: 118 KKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVP 177
KK G+R R E +EE+ K +HVRARRGQATDSHSLAERVRR +I+ER+R LQ +VP
Sbjct: 85 KKKGGKRDR-SSKEVDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVP 143
Query: 178 GCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDA 225
GC K G ++LDEIINYVQSLQNQVEFLSM++ + S Y F ++DA
Sbjct: 144 GCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGFGMDTDA 192
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 114/190 (60%), Gaps = 19/190 (10%)
Query: 58 EFPGNLAENFPGNFIQNNMLPVCHTVTSTKCESKNRKA----VEISESSNEDSSPVSEIE 113
EF G ++ P + ++ N C +++ SK RK E+ ++ S E
Sbjct: 277 EFSGGSGQDEP-SLLEGN----CGELSAKSLGSKKRKRSGEDAELDQAKGTPQSAKGSPE 331
Query: 114 TNKRK---------KNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGK 164
T ++ K SG++ + +G++ ++ +E +HVRARRGQAT+SHSLAERVRR K
Sbjct: 332 TQQKGDQKPTSTTSKASGKQGK-QGSQGSDQPKEEYIHVRARRGQATNSHSLAERVRREK 390
Query: 165 INERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESD 224
I+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL + DFN E
Sbjct: 391 ISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGL 450
Query: 225 AVETMQKAKA 234
+ + +++A
Sbjct: 451 LAKDILQSRA 460
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 83/114 (72%)
Query: 117 RKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIV 176
+ + +G +K+ K N K E K+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+V
Sbjct: 320 KAEQNGNQKQNKDNTKLPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLV 379
Query: 177 PGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETMQ 230
PGC K G +MLDEIINYVQSLQ QVEFLSMKL + D N E+ + + Q
Sbjct: 380 PGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDVNMEALSKDVFQ 433
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 92/139 (66%)
Query: 82 TVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVV 141
+V K K+ E S ++ E++S + + + G+++ + K E K+ +
Sbjct: 218 SVLQEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSSKPPEPPKDYI 277
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
HVRARRG+ATDSHSLAERVRR KI++R++ LQD+VPGC K +G +MLDEIINYVQSLQ
Sbjct: 278 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 337
Query: 202 QVEFLSMKLTAASTFYDFN 220
QVEFLSMKL + DFN
Sbjct: 338 QVEFLSMKLATVNPQLDFN 356
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
Query: 92 NRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQAT 151
N ++VE ++ + E + T+ K SG++ + +G++ + +E +HVRARRGQAT
Sbjct: 321 NLQSVEAAKDNVEAQQKGDQTPTSTPNKTSGKQGK-QGSQASDPPKEEYIHVRARRGQAT 379
Query: 152 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLT 211
+SHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 380 NSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 439
Query: 212 AASTFYDFNSES 223
+ DFN E
Sbjct: 440 TVNPRLDFNIEG 451
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 78/102 (76%)
Query: 119 KNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
+N G+++ G K E K+ +HVRARRG+ATDSHSLAERVRR KI++R++ LQD+VPG
Sbjct: 240 ENGGKKQGKDGASKLPEPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPG 299
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
C K +G +MLDEIINYVQSLQ QVEFLSMKL + DFN
Sbjct: 300 CNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 341
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 78/102 (76%)
Query: 119 KNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
+N G+++ G K E K+ +HVRARRG+ATDSHSLAERVRR KI++R++ LQD+VPG
Sbjct: 240 ENGGKKQGKDGASKLPEPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPG 299
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
C K +G +MLDEIINYVQSLQ QVEFLSMKL + DFN
Sbjct: 300 CNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 341
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 93/143 (65%)
Query: 78 PVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKS 137
P+ + K K+ E S ++ E++S + + + G+++ + K E
Sbjct: 9 PMSTSAAKEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSSKPPEPP 68
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
K+ +HVRARRG+ATDSHSLAERVRR KI++R++ LQD+VPGC K +G +MLDEIINYVQ
Sbjct: 69 KDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQ 128
Query: 198 SLQNQVEFLSMKLTAASTFYDFN 220
SLQ QVEFLSMKL + DFN
Sbjct: 129 SLQRQVEFLSMKLATVNPQLDFN 151
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 95/140 (67%), Gaps = 6/140 (4%)
Query: 91 KNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEK---EEEKSKEVVHVRARR 147
+ RKA E +S+ S+ + + + K G+R + EK E+E +K +HVRARR
Sbjct: 69 RKRKATE--DSATLSSAQSKDCKQQESKSKRGKRPNKETEEKSTTEDEATKGYIHVRARR 126
Query: 148 GQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
GQATDSHSLAERVRR +I+ER+R LQ +VPGC K G ++LDEIINYVQSLQNQVEFLS
Sbjct: 127 GQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 186
Query: 208 MKLTAAS-TFYDFNSESDAV 226
M++ + S Y F +SD +
Sbjct: 187 MRIASMSPVLYGFGLDSDGL 206
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 79/104 (75%), Gaps = 2/104 (1%)
Query: 119 KNSGRRKRVK--GNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIV 176
+N G +K+ K G K E K+ +HVRARRG+ATDSHSLAERVRR KI++R++ LQD+V
Sbjct: 244 ENGGGKKQGKDAGASKLPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLV 303
Query: 177 PGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
PGC K +G +MLDEIINYVQSLQ QVEFLSMKL + DFN
Sbjct: 304 PGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 347
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/156 (47%), Positives = 92/156 (58%), Gaps = 13/156 (8%)
Query: 80 CHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNK--------RKKNSGRRKRVKGNE 131
C ++ SK KA E ++ +S +E K RK +G R G
Sbjct: 180 CRKRKASGTSSKQSKAKEAVTTAPPESRETAETRAKKCKLSTDEERKPAAGEGWRGSGKG 239
Query: 132 KE-----EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMT 186
KE E K+ +HVRARRGQATDSHSLAERVRR KI ER++ LQD+VPGC K G
Sbjct: 240 KELVAADAEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKA 299
Query: 187 MMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
+MLDEIINYVQSLQ QVEFLSMKL+ + + ++
Sbjct: 300 VMLDEIINYVQSLQRQVEFLSMKLSTVNPRLELGAD 335
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 92/144 (63%), Gaps = 14/144 (9%)
Query: 90 SKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKR-------------VKGNEKEEEK 136
S N++ + S E S V+E +NK K++ + KG+E + +K
Sbjct: 146 SDNKQDKRVKASGEEGESKVTEQTSNKNGKSNANKNNNRETTSAETSKDNSKGSEVQNQK 205
Query: 137 SKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYV 196
E +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G MLDEIINYV
Sbjct: 206 -PEYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYV 264
Query: 197 QSLQNQVEFLSMKLTAASTFYDFN 220
QSLQ QVEFLSMKL A + DFN
Sbjct: 265 QSLQRQVEFLSMKLAAVNPRLDFN 288
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 81/113 (71%), Gaps = 2/113 (1%)
Query: 118 KKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVP 177
K G+R R EEE+ K +HVRARRGQATDSHSLAERVRR +I+ER+R LQ +VP
Sbjct: 96 KNRGGKRGRSSKEVDEEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVP 155
Query: 178 GCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSE-SDAVET 228
GC K G ++LDEIINYVQSLQNQVEFLSMK+ + S Y F + +DA T
Sbjct: 156 GCDKVTGKALVLDEIINYVQSLQNQVEFLSMKIASLSPVLYGFGMDTTDAFST 208
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 81/113 (71%), Gaps = 2/113 (1%)
Query: 118 KKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVP 177
K G+R R EEE+ K +HVRARRGQATDSHSLAERVRR +I+ER+R LQ +VP
Sbjct: 86 KNRGGKRGRSSKEVDEEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVP 145
Query: 178 GCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSE-SDAVET 228
GC K G ++LDEIINYVQSLQNQVEFLSMK+ + S Y F + +DA T
Sbjct: 146 GCDKVTGKALVLDEIINYVQSLQNQVEFLSMKIASLSPVLYGFGMDTTDAFST 198
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 73/96 (76%)
Query: 125 KRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMG 184
K+ K K E K+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G
Sbjct: 386 KQTKDIVKTPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTG 445
Query: 185 MTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
+MLDEIINYVQSLQ QVEFLSMKL + DFN
Sbjct: 446 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN 481
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/126 (57%), Positives = 85/126 (67%), Gaps = 6/126 (4%)
Query: 130 NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
N K E K+ +HVRARRGQATDSHSLAERVRR KI ER++ LQD+VPGC K G +ML
Sbjct: 288 NTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALML 347
Query: 190 DEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAVETMQKAKAYKAKEMERLMKEGN 248
DEIINYVQSLQ QVEFLSMKL++ + T DFN V+ + RL +EG
Sbjct: 348 DEIINYVQSLQRQVEFLSMKLSSVNDTRLDFN-----VDALVSKDVMIPSSNNRLHEEGL 402
Query: 249 FACSSS 254
+ SSS
Sbjct: 403 QSKSSS 408
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/126 (57%), Positives = 85/126 (67%), Gaps = 6/126 (4%)
Query: 130 NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
N K E K+ +HVRARRGQATDSHSLAERVRR KI ER++ LQD+VPGC K G +ML
Sbjct: 288 NTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALML 347
Query: 190 DEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAVETMQKAKAYKAKEMERLMKEGN 248
DEIINYVQSLQ QVEFLSMKL++ + T DFN V+ + RL +EG
Sbjct: 348 DEIINYVQSLQRQVEFLSMKLSSVNDTRLDFN-----VDALVSKDVMIPSSNNRLHEEGL 402
Query: 249 FACSSS 254
+ SSS
Sbjct: 403 QSKSSS 408
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
Query: 119 KNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
KN+G+ + +G + + +E +HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VPG
Sbjct: 384 KNTGKHGK-QGAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPG 442
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
C K G +MLDEIINYVQSLQ QVEFLSMKL + DFN E
Sbjct: 443 CSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEG 487
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 86/126 (68%)
Query: 98 ISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLA 157
IS+ + E+++ S + KK G K+ K E+ + VHVRARRGQATDSHSLA
Sbjct: 156 ISDPTVENTNQRSAKRKEREKKGRGSTKKSKNESNEDAEKLPYVHVRARRGQATDSHSLA 215
Query: 158 ERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFY 217
ER RR KIN R++ LQ++VPGC K G ++LDEIIN+VQSLQ QVEFLSM+L A +
Sbjct: 216 ERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRV 275
Query: 218 DFNSES 223
DFN ES
Sbjct: 276 DFNIES 281
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
Query: 119 KNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
KN+G+ + +G + + +E +HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VPG
Sbjct: 279 KNTGKHGK-QGAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPG 337
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
C K G +MLDEIINYVQSLQ QVEFLSMKL + DFN E
Sbjct: 338 CSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEG 382
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 89/136 (65%), Gaps = 11/136 (8%)
Query: 85 STKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVR 144
S KC+++ VE + S D S ++ + KNS ++ E K+ VHVR
Sbjct: 127 SKKCKAEVNPKVEEAAS---DGSVGDRVQKQGKGKNS--------SKPAAEPPKDYVHVR 175
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARRGQATDSHSLAERVRR KI++R++ LQD+VPGC K +G +MLDEIINYVQSLQ QVE
Sbjct: 176 ARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVE 235
Query: 205 FLSMKLTAASTFYDFN 220
FLSMKL + DF
Sbjct: 236 FLSMKLATVNPQLDFG 251
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 89/136 (65%), Gaps = 11/136 (8%)
Query: 85 STKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVR 144
S KC+++ VE + S D S ++ + KNS ++ E K+ VHVR
Sbjct: 127 SKKCKAEVNPKVEEAAS---DGSVGDRVQKQGKGKNS--------SKPAAEPPKDYVHVR 175
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARRGQATDSHSLAERVRR KI++R++ LQD+VPGC K +G +MLDEIINYVQSLQ QVE
Sbjct: 176 ARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVE 235
Query: 205 FLSMKLTAASTFYDFN 220
FLSMKL + DF
Sbjct: 236 FLSMKLATVNPQLDFG 251
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/124 (57%), Positives = 84/124 (67%), Gaps = 6/124 (4%)
Query: 132 KEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDE 191
K E K+ +HVRARRGQATDSHSLAERVRR KI ER++ LQD+VPGC K G +MLDE
Sbjct: 288 KPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDE 347
Query: 192 IINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAVETMQKAKAYKAKEMERLMKEGNFA 250
IINYVQSLQ QVEFLSMKL++ + T DFN V+ + RL +EG +
Sbjct: 348 IINYVQSLQRQVEFLSMKLSSVNDTRLDFN-----VDALVSKDVMIPSSNNRLHEEGLQS 402
Query: 251 CSSS 254
SSS
Sbjct: 403 KSSS 406
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 59/70 (84%), Positives = 66/70 (94%)
Query: 135 EKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIIN 194
EK KEV+HVRA+RGQATDSHSLAERVRR +INE+LRCLQD+VPGCYKTMGM +MLD IIN
Sbjct: 113 EKPKEVIHVRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIIN 172
Query: 195 YVQSLQNQVE 204
YVQSLQNQ+E
Sbjct: 173 YVQSLQNQIE 182
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 85/124 (68%), Gaps = 7/124 (5%)
Query: 100 ESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAER 159
E N++ SP S +K NSG+++ G + + +HVRARRGQAT+SHSLAER
Sbjct: 266 EKRNDEQSPNSP----GKKSNSGKQQ---GKQSSDPPKDGYIHVRARRGQATNSHSLAER 318
Query: 160 VRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDF 219
VRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL + DF
Sbjct: 319 VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDF 378
Query: 220 NSES 223
N E
Sbjct: 379 NLEG 382
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 105/177 (59%), Gaps = 18/177 (10%)
Query: 49 PFSNPDNFFEFPGNLAENFPGNFIQNNMLPVCHTVT-------STKCESKNRKAVEISES 101
P N F +L+E +P +F P HT + ST C S K ++ S S
Sbjct: 4 PLINDSTFSSANPSLSEIWPSHF------PTDHTPSNKRHLSPSTDCGSN--KHIKSSGS 55
Query: 102 SNEDSSPV---SEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAE 158
++D + E++ N + K + E+ ++ +HVRARRGQATDSHSLAE
Sbjct: 56 GSQDQNGALKAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQATDSHSLAE 115
Query: 159 RVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAST 215
R RR KI+ER++ LQDIVPGC K +G ++LDEIINY+QSLQ+QVEFLSMKL A ++
Sbjct: 116 RARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNS 172
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 85/124 (68%), Gaps = 7/124 (5%)
Query: 100 ESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAER 159
E N++ SP S +K NSG+++ G + + +HVRARRGQAT+SHSLAER
Sbjct: 267 EKRNDEQSPNSP----GKKSNSGKQQ---GKQSSDPPKDGYIHVRARRGQATNSHSLAER 319
Query: 160 VRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDF 219
VRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL + DF
Sbjct: 320 VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDF 379
Query: 220 NSES 223
N E
Sbjct: 380 NLEG 383
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
EE +HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G +MLDEII
Sbjct: 162 EEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEII 221
Query: 194 NYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAV 226
NYVQSLQNQVEFLSMKL + + FYDF + DA+
Sbjct: 222 NYVQSLQNQVEFLSMKLASVNPMFYDFGMDLDAL 255
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 85/124 (68%), Gaps = 7/124 (5%)
Query: 100 ESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAER 159
E N++ SP S +K NSG+++ G + + +HVRARRGQAT+SHSLAER
Sbjct: 267 EKRNDEQSPNSP----GKKSNSGKQQ---GKQSSDPPKDGYIHVRARRGQATNSHSLAER 319
Query: 160 VRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDF 219
VRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL + DF
Sbjct: 320 VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDF 379
Query: 220 NSES 223
N E
Sbjct: 380 NLEG 383
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 93/147 (63%), Gaps = 16/147 (10%)
Query: 91 KNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKE------------EEKSK 138
KNR S +S + P E+++ K+KK G K EKE +E K
Sbjct: 122 KNRTNASSSFNSAQSKDP-REVKSKKQKK--GNVNDAKKEEKENSPKADSEKKVAKEPPK 178
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G MLDEIINYVQ
Sbjct: 179 DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQF 238
Query: 199 LQNQVEFLSMKLTAAST-FYDFNSESD 224
LQNQVEFLSMKL + + FYDF + D
Sbjct: 239 LQNQVEFLSMKLASVNPMFYDFGMDLD 265
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 85/118 (72%), Gaps = 5/118 (4%)
Query: 111 EIETNKRK---KNSGRRKRVKGNE--KEEEKSKEVVHVRARRGQATDSHSLAERVRRGKI 165
EI+ K K K+SG + + N+ K E K+ +HVRARRGQATDSHSLAERVRR KI
Sbjct: 316 EIDGAKGKAEAKSSGDANQKQNNDSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKI 375
Query: 166 NERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
++R++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL + DFN E+
Sbjct: 376 SKRMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMET 433
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 102/171 (59%), Gaps = 20/171 (11%)
Query: 69 GNFIQNNMLP-------VCHTVTSTKCESK---NRKAVEISESSNEDSSPVSE-IETNKR 117
G + N+M P V TV K + K K I S E S ++E I+ NK
Sbjct: 51 GEVVANSMKPGDLGFENVEETVKKRKADHKVDMKSKDKRIKVSVEEGESKITEQIKGNKN 110
Query: 118 KK--------NSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERL 169
K + G ++ KG+E + K + +HVRARRGQATDSHSLAERVRR KI+ER+
Sbjct: 111 TKLKNRENCDDVGSKENSKGSEIQNHKP-DYIHVRARRGQATDSHSLAERVRREKISERM 169
Query: 170 RCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
+ LQD+VPGC K G MLDEIINYVQSLQ QVEFLSMKL A + DFN
Sbjct: 170 KYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 220
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 103/163 (63%), Gaps = 18/163 (11%)
Query: 82 TVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSG-------RRKRVKGNEKE- 133
TVT T SK RK+ S +S+ S ++ K+ KN G R ++ K +K
Sbjct: 102 TVTVTSPCSKKRKSRNNSSASSAQSKGSNDQSNGKKAKNKGEVEEGKERDQKAKSGKKLL 161
Query: 134 EEKSKE---------VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMG 184
EEK K+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G
Sbjct: 162 EEKLKDSEDGGATTGYIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTG 221
Query: 185 MTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAV 226
+MLDEIINYVQSLQNQVEFLSMKL + + F+DF + D +
Sbjct: 222 KALMLDEIINYVQSLQNQVEFLSMKLASLNPIFFDFRMDLDGL 264
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
Query: 119 KNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
K SG+ ++ G++ + +E +HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VPG
Sbjct: 198 KASGKNAKL-GSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPG 256
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
C K G +MLDEIINYVQSLQ QVEFLSMKL + DFN E
Sbjct: 257 CSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEG 301
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 103/163 (63%), Gaps = 18/163 (11%)
Query: 82 TVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSG-------RRKRVKGNEKE- 133
TVT T SK RK+ S +S+ S ++ K+ KN G R ++ K +K
Sbjct: 70 TVTVTSPCSKKRKSRNNSSASSAQSKGSNDQSNGKKAKNKGEVEEGKERDQKAKSGKKLL 129
Query: 134 EEKSKE---------VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMG 184
EEK K+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G
Sbjct: 130 EEKLKDSEDGGATTGYIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTG 189
Query: 185 MTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAV 226
+MLDEIINYVQSLQNQVEFLSMKL + + F+DF + D +
Sbjct: 190 KALMLDEIINYVQSLQNQVEFLSMKLASLNPIFFDFRMDLDGL 232
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 83/114 (72%), Gaps = 3/114 (2%)
Query: 118 KKNSGRRKRV-KGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIV 176
K G+R R K E +EE+ K +HVRARRGQATDSHSLAERVRR +I+ER+R LQ +V
Sbjct: 94 KNRGGKRGRSSKEVEDDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALV 153
Query: 177 PGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSE-SDAVET 228
PGC K G ++LDEIINYVQSLQNQVEFLSMK+ + S Y F + +DA T
Sbjct: 154 PGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKIASLSPVLYGFGMDTTDAFST 207
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 82/125 (65%), Gaps = 7/125 (5%)
Query: 99 SESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAE 158
S+ E+SSP + K K + E E + ++ +HVRARRGQAT+SHSLAE
Sbjct: 219 SKDKGEESSPATTTGPGKSKGKGAK-------ETSESQKEDYIHVRARRGQATNSHSLAE 271
Query: 159 RVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYD 218
R+RR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL + D
Sbjct: 272 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD 331
Query: 219 FNSES 223
N E
Sbjct: 332 LNIEG 336
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 87/129 (67%), Gaps = 8/129 (6%)
Query: 85 STKCESKN--RKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVH 142
+ +C + + +KA E + S +E +++K G+ N K E K+ VH
Sbjct: 131 AKRCRTGDAEKKAAAPVRPKAEQAGSDSSVEDGEQRKGKGK------NAKPVEPPKDYVH 184
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATDSHSLAERVRR +I++R++ LQD+VPGC K +G +MLDEIINYVQSLQ Q
Sbjct: 185 VRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQ 244
Query: 203 VEFLSMKLT 211
VEFLSMKL
Sbjct: 245 VEFLSMKLA 253
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/144 (50%), Positives = 99/144 (68%), Gaps = 8/144 (5%)
Query: 87 KCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRV---KGNEKE-EEKS----K 138
K S++R + E S + ++ ++ E + K+ +R V K N K+ E+KS +
Sbjct: 201 KRPSQDRGVKNVQEGSQQLATLAAKQEKDDGDKDEPKRPIVTSRKSNGKQTEDKSDAPKE 260
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +H+RAR GQAT+SHSLAERVRR KI+ER++ LQD+VPGC K +G +MLDEIINYVQS
Sbjct: 261 DYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQS 320
Query: 199 LQNQVEFLSMKLTAASTFYDFNSE 222
LQ QVEFLSMKL+A + DFN E
Sbjct: 321 LQRQVEFLSMKLSAVNPALDFNIE 344
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Query: 113 ETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCL 172
+T+ K SG+ + +G++ + ++ VHVRARRGQAT+SHSLAERVRR KI+ER++ L
Sbjct: 276 QTSSTAKASGKNAK-QGSQASDPPNEGYVHVRARRGQATNSHSLAERVRREKISERMKFL 334
Query: 173 QDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
QD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL + DFN E
Sbjct: 335 QDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPHVDFNME 384
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 90/130 (69%), Gaps = 1/130 (0%)
Query: 94 KAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDS 153
++ E ++ S E + T+ K++G++ + +G+ ++ +E +HVRARRGQAT+S
Sbjct: 102 QSAEPAKGSPETQQKGDQKPTSTTSKDAGKQGK-QGSLGSDQPKEEYIHVRARRGQATNS 160
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAA 213
HSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 161 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 220
Query: 214 STFYDFNSES 223
+ D N E
Sbjct: 221 NPRLDLNIEG 230
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 85/124 (68%), Gaps = 9/124 (7%)
Query: 97 EISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSL 156
++ E + D+S +E +KK G+ + E K+ VHVRARRGQATDSHSL
Sbjct: 120 KVEEVAASDAS----VELKAQKKGKGKTAK-----PAVEPPKDYVHVRARRGQATDSHSL 170
Query: 157 AERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTF 216
AERVRR KI++R++ LQD+VPGC K +G +MLDEIINYVQSLQ QVEFLSMKL +
Sbjct: 171 AERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQ 230
Query: 217 YDFN 220
DF+
Sbjct: 231 LDFS 234
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 85/124 (68%), Gaps = 9/124 (7%)
Query: 97 EISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSL 156
++ E + D+S +E +KK G+ + E K+ VHVRARRGQATDSHSL
Sbjct: 120 KVEEVAASDAS----VELKAQKKGKGKTAK-----PAVEPPKDYVHVRARRGQATDSHSL 170
Query: 157 AERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTF 216
AERVRR KI++R++ LQD+VPGC K +G +MLDEIINYVQSLQ QVEFLSMKL +
Sbjct: 171 AERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQ 230
Query: 217 YDFN 220
DF+
Sbjct: 231 LDFS 234
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 85/124 (68%), Gaps = 9/124 (7%)
Query: 97 EISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSL 156
++ E + D+S +E +KK G+ + E K+ VHVRARRGQATDSHSL
Sbjct: 120 KVEEVAASDAS----VELKAQKKGKGKTAK-----PAVEPPKDYVHVRARRGQATDSHSL 170
Query: 157 AERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTF 216
AERVRR KI++R++ LQD+VPGC K +G +MLDEIINYVQSLQ QVEFLSMKL +
Sbjct: 171 AERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQ 230
Query: 217 YDFN 220
DF+
Sbjct: 231 LDFS 234
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/143 (51%), Positives = 89/143 (62%), Gaps = 5/143 (3%)
Query: 83 VTSTKCESKNRKAVEISESSNEDSSPVSEIETNK--RKKNSGRRKRVKGNEKEEEKSKEV 140
V S +S + E +N D SE N K NSG+R+ G + +
Sbjct: 244 VNSEAAQSHRSQQSEEEPDNNGDKKRNSEQSPNSPGNKTNSGKRQ---GKQSSDLPKDGY 300
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ
Sbjct: 301 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 360
Query: 201 NQVEFLSMKLTAASTFYDFNSES 223
QVEFLSMKL + DFN E
Sbjct: 361 RQVEFLSMKLATVNPQMDFNLEG 383
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 85/124 (68%), Gaps = 9/124 (7%)
Query: 97 EISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSL 156
++ E + D+S +E +KK G+ + E K+ VHVRARRGQATDSHSL
Sbjct: 120 KVEEVAASDAS----VELKAQKKGKGKTAK-----PAVEPPKDYVHVRARRGQATDSHSL 170
Query: 157 AERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTF 216
AERVRR KI++R++ LQD+VPGC K +G +MLDEIINYVQSLQ QVEFLSMKL +
Sbjct: 171 AERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQ 230
Query: 217 YDFN 220
DF+
Sbjct: 231 LDFS 234
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 75/102 (73%)
Query: 122 GRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYK 181
G K+ K N E K+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K
Sbjct: 6 GNHKQKKDNSNPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK 65
Query: 182 TMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
G +MLDEIINYVQSLQ QVEFLSMK+ + + N E+
Sbjct: 66 VTGKAVMLDEIINYVQSLQRQVEFLSMKMATVNPKMEINMET 107
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/83 (73%), Positives = 69/83 (83%)
Query: 129 GNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMM 188
G E E SK+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +M
Sbjct: 225 GKEVAAEPSKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVM 284
Query: 189 LDEIINYVQSLQNQVEFLSMKLT 211
LDEIINYVQSLQ QVEFLSMKL+
Sbjct: 285 LDEIINYVQSLQRQVEFLSMKLS 307
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 82/119 (68%), Gaps = 4/119 (3%)
Query: 113 ETNKRKKNSGRRKRVKGNEK---EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERL 169
E+ R+ K EK E+E ++ +HVRARRGQATDSHSLAERVRR +I+ER+
Sbjct: 106 ESKSRRGKRPHNKEANTEEKSATEDEATRGYIHVRARRGQATDSHSLAERVRRERISERM 165
Query: 170 RCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAVE 227
R LQ +VPGC K G ++LDEIINYVQSLQNQVEFLSM++ + S Y F +SD +
Sbjct: 166 RMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGLDSDGLH 224
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 104/190 (54%), Gaps = 40/190 (21%)
Query: 53 PDNFFEFPGNLAENFPGNFIQN---NMLPVCHTVTSTKCESKNRKAVEISESSNEDSSPV 109
P+ + P +LA +P IQ+ P+ H A +I+ +NEDS
Sbjct: 8 PEIWQSRPPHLAPGYPDFSIQDLTSEQKPLNH-------------ARKITRVTNEDSVQC 54
Query: 110 SEIETNKRKKNS---------GRRKRVKGNEKEEEKS---------------KEVVHVRA 145
+ NS G+R + GN K EE S K+ +HVRA
Sbjct: 55 VSTTNGGARGNSNAVNDDGGDGKRSKTSGNSKGEENSSGKHAEETSDEPHPKKDYIHVRA 114
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QSL +QVEF
Sbjct: 115 RRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLHHQVEF 174
Query: 206 LSMKLTAAST 215
LSMKL A ++
Sbjct: 175 LSMKLEAVNS 184
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 82/119 (68%), Gaps = 4/119 (3%)
Query: 113 ETNKRKKNSGRRKRVKGNEK---EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERL 169
E+ R+ K EK E+E ++ +HVRARRGQATDSHSLAERVRR +I+ER+
Sbjct: 106 ESKSRRGKRPHNKEANTEEKSATEDEATRGYIHVRARRGQATDSHSLAERVRRERISERM 165
Query: 170 RCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAVE 227
R LQ +VPGC K G ++LDEIINYVQSLQNQVEFLSM++ + S Y F +SD +
Sbjct: 166 RMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGLDSDGLH 224
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 82/114 (71%)
Query: 109 VSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINER 168
+ + +T + KN G +++ E++ + +HVRARRGQATDSHSLAERVRR KI+ER
Sbjct: 133 IKDNKTATKSKNRGTCANSSNSKENEDQKLDYIHVRARRGQATDSHSLAERVRREKISER 192
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
++ LQD+VPGC K G MLDEIINYVQSLQ QVEFLSMKL + +FNS+
Sbjct: 193 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLATVNPALEFNSD 246
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 86/131 (65%), Gaps = 11/131 (8%)
Query: 88 CESKNRKAVEIS-------ESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEV 140
C+++ + VE S E + DSS +K G+ K N K E ++
Sbjct: 136 CKAEGGEGVEGSPVKLPKPEQAGSDSSVEDGGGAQNQKPPPGKGK----NAKPVEPPRDY 191
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VHVRARRGQATDSHSLAERVRR +I++R++ LQD+VPGC K +G +MLDEIINYVQSLQ
Sbjct: 192 VHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQ 251
Query: 201 NQVEFLSMKLT 211
QVEFLSMKL
Sbjct: 252 RQVEFLSMKLA 262
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 98/150 (65%), Gaps = 17/150 (11%)
Query: 95 AVEISESSNEDSSPVSE-----IETNKRKKNS---GRRKRVKGNEKE-EEKS-------K 138
++E S S+ D+SP + E + K+S G+ +R K KE EEKS K
Sbjct: 59 SLESSVSAVLDTSPSVDRKRKAAEDSAHSKDSCKDGKSRRGKKASKEVEEKSTTEDEPPK 118
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+HVRARRGQATDSHSLAERVRR +I+ER+R LQ +VPGC K G ++LDEIINYVQS
Sbjct: 119 GYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQS 178
Query: 199 LQNQVEFLSMKLTAAS-TFYDFNSESDAVE 227
LQNQVEFLSM++ + S Y F +SD +
Sbjct: 179 LQNQVEFLSMRIASMSPVLYGFGMDSDGLH 208
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 79/109 (72%)
Query: 115 NKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQD 174
+R + + K K + ++E ++ VHVRARRGQATDSHSLAERVRR KI +++ LQD
Sbjct: 149 GERGRKQAKGKSSKSKQADDEPPRDYVHVRARRGQATDSHSLAERVRREKITIKMKMLQD 208
Query: 175 IVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
+VPGC K +G +MLDEIINYVQSLQ QVEFLSMKL + DF++ S
Sbjct: 209 LVPGCNKVIGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSTLS 257
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 83/121 (68%), Gaps = 4/121 (3%)
Query: 103 NEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRR 162
E+SSP + K+ G+ ++ E E + ++ +H+RARRGQAT+SHSLAER+RR
Sbjct: 220 GEESSPATTTAGAGPGKSRGKGEK----EVPESQKEDYIHIRARRGQATNSHSLAERLRR 275
Query: 163 GKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL + D N E
Sbjct: 276 EKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 335
Query: 223 S 223
Sbjct: 336 G 336
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 83/121 (68%), Gaps = 4/121 (3%)
Query: 103 NEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRR 162
E+SSP + K+ G+ ++ E E + ++ +H+RARRGQAT+SHSLAER+RR
Sbjct: 210 GEESSPATTTAGAGPGKSRGKGEK----EVPESQKEDYIHIRARRGQATNSHSLAERLRR 265
Query: 163 GKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL + D N E
Sbjct: 266 EKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 325
Query: 223 S 223
Sbjct: 326 G 326
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 94/137 (68%), Gaps = 5/137 (3%)
Query: 79 VCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSK 138
+ T ++ + + N K +++ ES +E+ +E++ N S K++ + E K
Sbjct: 88 MVSTSSANQLSNSNDKRMKVVESRDENGGIKAEVDPN-----SSDGKKLAEQSPKPEPPK 142
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QS
Sbjct: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
Query: 199 LQNQVEFLSMKLTAAST 215
LQ QVEFLSMKL A ++
Sbjct: 203 LQRQVEFLSMKLEAVNS 219
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 99/184 (53%), Gaps = 31/184 (16%)
Query: 79 VCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNE------- 131
V V +TK S+ RK++ S N SP S T K SG KG +
Sbjct: 103 VSDRVHTTKSNSRKRKSIP---SGNGKESPASSSLTASNSKVSGENGGSKGGKRSKQDVA 159
Query: 132 --------------------KEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRC 171
K E K+ +HVRARRGQATDSHSLAER RR KI+ER+
Sbjct: 160 GSSKNGVEKCDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTL 219
Query: 172 LQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESD-AVETMQ 230
LQD+VPGC + G +MLDEIINYVQSLQ QVEFLSMKL + +FN+ + + E +Q
Sbjct: 220 LQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTEMIQ 279
Query: 231 KAKA 234
++
Sbjct: 280 PGES 283
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
Query: 122 GRRKRVKG-NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCY 180
G K+ KG N K E K+ VHVRARRGQATDSHSLAERVRR +I++R++ LQD+VPGC
Sbjct: 168 GEPKKGKGKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCN 227
Query: 181 KTMGMTMMLDEIINYVQSLQNQVEFLSMKLT 211
K +G +MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 228 KVIGKALMLDEIINYVQSLQRQVEFLSMKLA 258
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 92/170 (54%), Gaps = 30/170 (17%)
Query: 79 VCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNE------- 131
V V +TK S+ RK++ S N SP S T K SG KG +
Sbjct: 106 VSDRVHTTKSNSRKRKSIP---SGNGKESPASSSLTASNSKVSGENGGSKGGKRSKQDEA 162
Query: 132 --------------------KEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRC 171
K E K+ +HVRARRGQATDSHSLAER RR KI+ER+
Sbjct: 163 GSSKNGVEKCDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTL 222
Query: 172 LQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNS 221
LQD+VPGC + G +MLDEIINYVQSLQ QVEFLSMKL + +FN+
Sbjct: 223 LQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNA 272
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 91/137 (66%), Gaps = 15/137 (10%)
Query: 79 VCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSK 138
+ T+ +++ E+K +K E+ + E S +E E K++ E +K
Sbjct: 87 IVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKKQQM---------------EPTK 131
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QS
Sbjct: 132 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 191
Query: 199 LQNQVEFLSMKLTAAST 215
LQ QVEFLSMKL A ++
Sbjct: 192 LQRQVEFLSMKLEAVNS 208
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/97 (68%), Positives = 73/97 (75%), Gaps = 5/97 (5%)
Query: 129 GNEKEEEKSKEV-----VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTM 183
GN K+ K EV +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K
Sbjct: 218 GNSKDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIT 277
Query: 184 GMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
G MLDEIINYVQSLQ QVEFLSMKL A + DFN
Sbjct: 278 GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 314
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 73/92 (79%)
Query: 131 EKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLD 190
E++ E +K+ +HVRARRGQATDSHSLAERVRR +I+ER++ LQ +VPGC K G +MLD
Sbjct: 69 EEKPEPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLD 128
Query: 191 EIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
EIINYVQSLQ QVEFLSMKL + DF+S
Sbjct: 129 EIINYVQSLQRQVEFLSMKLATMNPQLDFDSH 160
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 91/137 (66%), Gaps = 15/137 (10%)
Query: 79 VCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSK 138
+ T+ +++ E+K +K E+ + E S +E E K++ E +K
Sbjct: 87 IVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKKQQM---------------EPTK 131
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QS
Sbjct: 132 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 191
Query: 199 LQNQVEFLSMKLTAAST 215
LQ QVEFLSMKL A ++
Sbjct: 192 LQRQVEFLSMKLEAVNS 208
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 96/153 (62%), Gaps = 8/153 (5%)
Query: 78 PVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETN-------KRKKNSGRRKRVKGN 130
P + K ++R + E S + ++ V++ E + KR ++ R+ K
Sbjct: 190 PSVSSAKKRKRSGQDRGVKHVQEGSQQLATVVAKQEKDNDEKDGPKRPISASRKSNGKQT 249
Query: 131 EKEEEKSKE-VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
E + KE +H+RAR GQAT+SHSLAERVRR KI+ER++ LQD+VPGC K +G +ML
Sbjct: 250 EDNSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVML 309
Query: 190 DEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
DEIINYVQSLQ QVEFLSMKL+ + DFN E
Sbjct: 310 DEIINYVQSLQRQVEFLSMKLSTVNPALDFNIE 342
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 96/153 (62%), Gaps = 8/153 (5%)
Query: 78 PVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETN-------KRKKNSGRRKRVKGN 130
P + K ++R + E S + ++ V++ E + KR ++ R+ K
Sbjct: 190 PSVSSAKKRKRSGQDRGVKHVQEGSQQLATVVAKQEKDNDEKDGPKRPISASRKSNGKQT 249
Query: 131 EKEEEKSKE-VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
E + KE +H+RAR GQAT+SHSLAERVRR KI+ER++ LQD+VPGC K +G +ML
Sbjct: 250 EDNSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVML 309
Query: 190 DEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
DEIINYVQSLQ QVEFLSMKL+ + DFN E
Sbjct: 310 DEIINYVQSLQRQVEFLSMKLSTVNPALDFNIE 342
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 75/102 (73%)
Query: 122 GRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYK 181
G+ R + + +E +HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VPGC K
Sbjct: 232 GKSSRKQAKDNAGSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSK 291
Query: 182 TMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
G +MLDEIINYVQSLQ QVEFLSMKL + + D N ES
Sbjct: 292 VTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDLNIES 333
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 84/123 (68%), Gaps = 18/123 (14%)
Query: 122 GRRKRVKGNEKEEEKSKEV-----------------VHVRARRGQATDSHSLAERVRRGK 164
G++++ NE +E+K + +HVRARRGQATDSHSLAERVRR K
Sbjct: 134 GKKQKKCNNEVKEDKKPKAEKKDQKKVPDQEPPTGYIHVRARRGQATDSHSLAERVRREK 193
Query: 165 INERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAST-FYDFNSES 223
I+ER++ LQ +VPGC K G +MLDEIINYVQSLQNQVEFLSMKL + + FYDF +
Sbjct: 194 ISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPLFYDFGMDF 253
Query: 224 DAV 226
DA+
Sbjct: 254 DAL 256
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Query: 119 KNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
K +G++ + + ++ + +E +HVRARRGQAT+SHSLAERVRR KI+ER+R LQD+VPG
Sbjct: 318 KPAGKQGK-QDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDLVPG 376
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
C K G +MLDEIINYVQSLQ QVEFLSMKL + DFN E
Sbjct: 377 CSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 420
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 73/95 (76%)
Query: 129 GNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMM 188
G++ + +E +HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VPGC K G +M
Sbjct: 344 GSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 403
Query: 189 LDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
LDEIINYVQSLQ QVEFLSMKL + DFN E
Sbjct: 404 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEG 438
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 92/134 (68%), Gaps = 4/134 (2%)
Query: 79 VCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSK 138
+ T + + + N K ++IS + +E+ +E+E + + K + ++ E+ +
Sbjct: 97 IVSTSSGSGMNASNGKRMKISRTPDENGGSKAELEAS----SVAGEKPAEESKPAEQSKQ 152
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QS
Sbjct: 153 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 212
Query: 199 LQNQVEFLSMKLTA 212
LQ QVEFLSMKL A
Sbjct: 213 LQRQVEFLSMKLEA 226
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 73/92 (79%)
Query: 132 KEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDE 191
K E K+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDE
Sbjct: 358 KPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 417
Query: 192 IINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
IINYVQSLQ QVEFLSMKL++ + + N E+
Sbjct: 418 IINYVQSLQRQVEFLSMKLSSVNPRMEINMET 449
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 69/85 (81%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
+E +HVRARRGQAT+SHSLAERVRR KI+ER+R LQD+VPGC K G +MLDEIINYVQ
Sbjct: 336 EEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQ 395
Query: 198 SLQNQVEFLSMKLTAASTFYDFNSE 222
SLQ QVEFLSMKL + DFN E
Sbjct: 396 SLQRQVEFLSMKLATVNPRLDFNIE 420
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 81/107 (75%), Gaps = 2/107 (1%)
Query: 118 KKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVP 177
K++ G+R R + +EE+ K +HVRARRGQATD+HSLAERVRR +I+ER+R LQ +VP
Sbjct: 87 KRSGGKRDR-SSKKVDEEEPKGYIHVRARRGQATDNHSLAERVRRERISERMRVLQALVP 145
Query: 178 GCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSES 223
GC K G ++LDEIINYVQSLQNQVEFLSM++ + S Y F +S
Sbjct: 146 GCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGFGMDS 192
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 82/119 (68%), Gaps = 4/119 (3%)
Query: 113 ETNKRKKNSGRRKRVKGNEK---EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERL 169
E+ R+ K EK E+E ++ +HVRARRGQATDSHSLAERVRR +I+ER+
Sbjct: 106 ESKSRRGKRPHNKEANTEEKSATEDEATRGYIHVRARRGQATDSHSLAERVRRERISERM 165
Query: 170 RCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAVE 227
R LQ +VPGC K G ++LDEIINYVQSLQNQVEFLSM++ + S Y F +SD +
Sbjct: 166 RMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGLDSDGLH 224
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
EE +HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G +MLDEII
Sbjct: 155 EEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEII 214
Query: 194 NYVQSLQNQVEFLSMKLTAAST-FYDFNSESDAV 226
NYVQSLQNQVEFLSMKL + + FYD ++ D +
Sbjct: 215 NYVQSLQNQVEFLSMKLASVNPMFYDLATDLDTL 248
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 104/177 (58%), Gaps = 18/177 (10%)
Query: 49 PFSNPDNFFEFPGNLAENFPGNFIQNNMLPVCHTVT-------STKCESKNRKAVEISES 101
P N F +L+E +P +F P HT + ST C S K ++ S S
Sbjct: 4 PLINDSTFSSANPSLSEIWPSHF------PTDHTPSNKRHLSPSTDCGSN--KHIKSSGS 55
Query: 102 SNEDSSPV---SEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAE 158
++D + E++ N + K + E+ ++ +HVRARRGQATDSHSLAE
Sbjct: 56 GSQDQNGALKAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQATDSHSLAE 115
Query: 159 RVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAST 215
R RR KI+ER++ LQDIVPGC K +G ++LDEIINY+QSLQ+QVEFL MKL A ++
Sbjct: 116 RARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLFMKLEAVNS 172
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 92/134 (68%), Gaps = 4/134 (2%)
Query: 79 VCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSK 138
+ T + + + N K ++IS + +E+ +E+E + + K + ++ E+ +
Sbjct: 82 IVSTSSGSGMNASNGKRMKISRTPDENGGSKAELEAS----SVAGEKPAEESKPAEQSKQ 137
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QS
Sbjct: 138 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 197
Query: 199 LQNQVEFLSMKLTA 212
LQ QVEFLSMKL A
Sbjct: 198 LQRQVEFLSMKLEA 211
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 81/107 (75%), Gaps = 2/107 (1%)
Query: 118 KKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVP 177
K++ G+R R + +EE+ K +HVRARRGQATD+HSLAERVRR +I+ER+R LQ +VP
Sbjct: 87 KRSGGKRDR-SSKKVDEEEPKGYIHVRARRGQATDNHSLAERVRRERISERMRVLQALVP 145
Query: 178 GCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSES 223
GC K G ++LDEIINYVQSLQNQVEFLSM++ + S Y F +S
Sbjct: 146 GCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGFGMDS 192
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 74/102 (72%)
Query: 122 GRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYK 181
G+ K E E + ++ +HVRARRGQAT+SHSLAER+RR KI+ER++ LQD+VPGC K
Sbjct: 232 GKSKGKGARETSESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSK 291
Query: 182 TMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
G +MLDEIINYVQSLQ QVEFLSMKL + D N E
Sbjct: 292 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEG 333
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/117 (58%), Positives = 81/117 (69%), Gaps = 10/117 (8%)
Query: 114 TNKRKKNSGRRKRVKGNE---------KEEEKSKEVVHVRARRGQATDSHSLAERVRRGK 164
T + K+ +K+ K NE +EEE +HVRARRGQATDSHSLAERVRR K
Sbjct: 97 TKRETKSRKSQKKPKANESDEMKERTQEEEEAPVGYIHVRARRGQATDSHSLAERVRREK 156
Query: 165 INERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKL-TAASTFYDFN 220
I+ER++ LQ +VPGC K G +MLDEIINYVQSLQNQVEFLSMKL T + Y+F
Sbjct: 157 ISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQVEFLSMKLATVSPMLYEFG 213
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 128 KGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTM 187
KG+E + +K + +HVRARRGQATDSHSLAERVRR KI+ER++ LQD++PGC K G
Sbjct: 178 KGSEVQNQK-PDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAG 236
Query: 188 MLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
MLDEIINYVQSLQ QVEFLSMKL A + DFN
Sbjct: 237 MLDEIINYVQSLQRQVEFLSMKLAAVNPGLDFN 269
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 91/138 (65%), Gaps = 7/138 (5%)
Query: 119 KNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
+N+ +V+ E++ E K+ +HVRARRGQATDSHSLAERVRR +I+ER++ LQ +VPG
Sbjct: 223 ENAAVPAKVELEEEKPEPVKDYIHVRARRGQATDSHSLAERVRRKRISERMKLLQSLVPG 282
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETMQKA--KAYK 236
C K G +MLDEIINYVQSLQ QVEFLSMKL+ + D + + + M + AY
Sbjct: 283 CNKITGKALMLDEIINYVQSLQRQVEFLSMKLSTMNPQLDLDGQYKPSKDMNQVTMPAYA 342
Query: 237 AKEMERLMKEGNFACSSS 254
+ E G F+ +SS
Sbjct: 343 SDE-----PAGAFSYASS 355
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 73/92 (79%)
Query: 131 EKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLD 190
E++ E +K+ +HVRARRGQATDSHSLAERVRR +I+ER++ LQ +VPGC K G +MLD
Sbjct: 99 EEKPEPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLD 158
Query: 191 EIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
EIINYVQSLQ QVEFLSMKL + DF+S
Sbjct: 159 EIINYVQSLQRQVEFLSMKLATMNPQLDFDSH 190
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 95/143 (66%), Gaps = 5/143 (3%)
Query: 85 STKCESKN---RKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVV 141
S KC+ ++ R VE E++ +S S RK+ G+ + K +E ++ V
Sbjct: 9 SKKCKIEDETVRPKVE-EEAATATASDGSAGGERGRKQAKGKVSKSK-QPAADEPPRDYV 66
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
HVRARRGQATDSHSLAERVRR KI +++ LQD+VPGC K +G +MLDEIINYVQSLQ
Sbjct: 67 HVRARRGQATDSHSLAERVRREKITLKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQ 126
Query: 202 QVEFLSMKLTAASTFYDFNSESD 224
QVEFLSMKL+ + DF++ S+
Sbjct: 127 QVEFLSMKLSTVNPQLDFDTLSN 149
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 77/102 (75%), Gaps = 4/102 (3%)
Query: 119 KNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
K+SG++ + +EE +HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VPG
Sbjct: 229 KSSGKQAKDNAGSPKEE----YIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPG 284
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
C K G +MLDEIINYVQSLQ QVEFLSMKL + + DFN
Sbjct: 285 CSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFN 326
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
EE +HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G +MLDEII
Sbjct: 138 EEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEII 197
Query: 194 NYVQSLQNQVEFLSMKLTAAST-FYDFNSESDAV 226
NYVQSLQNQVEFLSMKL + + FYD ++ D +
Sbjct: 198 NYVQSLQNQVEFLSMKLASVNPMFYDLATDLDTL 231
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 128 KGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTM 187
KG+E + +K + +HVRARRGQATDSHSLAERVRR KI+ER++ LQD++PGC K G
Sbjct: 178 KGSEVQNQK-PDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAG 236
Query: 188 MLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
MLDEIINYVQSLQ QVEFLSMKL A + DFN
Sbjct: 237 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 269
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 82/120 (68%), Gaps = 5/120 (4%)
Query: 103 NEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRR 162
N+D+ RK + + K G+ KE+ +HVRARRGQAT+SHSLAERVRR
Sbjct: 223 NDDNGEPKRSSVASRKSSGKQTKDNAGSPKED-----YIHVRARRGQATNSHSLAERVRR 277
Query: 163 GKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL + + DFN E
Sbjct: 278 EKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIE 337
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 90/129 (69%), Gaps = 4/129 (3%)
Query: 82 TVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVV 141
TS ++N K ++IS S E++ + IE + +SG K + + + E K+ +
Sbjct: 112 ATTSANELTENGKRMKISGSRYENNGSKTGIEAS----SSGGGKSAEKSSQPPEPPKDYI 167
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QSLQ
Sbjct: 168 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 227
Query: 202 QVEFLSMKL 210
QVEFLSMKL
Sbjct: 228 QVEFLSMKL 236
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 93/136 (68%), Gaps = 7/136 (5%)
Query: 87 KCESKNRKAVEISESSNEDSSPVSEIE-TNKRKKNSGRRKRVKGNEKEEEKSKE-VVHVR 144
+ + N K ++IS S NE+ +E+E ++ KN+ + N K E K+ +HVR
Sbjct: 93 ELQDSNVKRMKISGSQNENGKSKAEVEASSANDKNAAEQ-----NSKISEPPKQDYIHVR 147
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QSLQ QVE
Sbjct: 148 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 207
Query: 205 FLSMKLTAASTFYDFN 220
FLSMKL A ++ N
Sbjct: 208 FLSMKLEAVNSRMGMN 223
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 82/125 (65%), Gaps = 10/125 (8%)
Query: 99 SESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAE 158
S+ E+SSP + + K + KE + ++ +HVRARRGQAT+SHSLAE
Sbjct: 207 SKDKGEESSPATTTTGKSKGKGA----------KESSEKEDYIHVRARRGQATNSHSLAE 256
Query: 159 RVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYD 218
R+RR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL + D
Sbjct: 257 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD 316
Query: 219 FNSES 223
N E
Sbjct: 317 LNIEG 321
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 88/139 (63%), Gaps = 16/139 (11%)
Query: 88 CESKNRKAVEISESSNEDSSPVSEIE---TNKRKKNSGRRKRVKGNEKEEEKSKEVVHVR 144
E+ N ++ + +DSS ++ + TN + G ++ + +HVR
Sbjct: 31 IETTNENVLDTKQKGGQDSSTMANAKPSGTNAKNSTDGAKE-------------DYIHVR 77
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARRGQAT+SHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVE
Sbjct: 78 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 137
Query: 205 FLSMKLTAASTFYDFNSES 223
FLSMKL A + DFN E
Sbjct: 138 FLSMKLAAVNPTLDFNIEG 156
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 77/99 (77%), Gaps = 1/99 (1%)
Query: 125 KRVKGNEKEEEKSKE-VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTM 183
K+ K + + EE SKE +HVRARRGQAT+SHSLAERVRR KI+ER+R LQ++VPGC K
Sbjct: 212 KQKKDDSESEEGSKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCDKKT 271
Query: 184 GMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
G +MLDEIINYVQSLQ QVEFLSMKL + +FN E
Sbjct: 272 GKAVMLDEIINYVQSLQQQVEFLSMKLATVNPQLNFNVE 310
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 76/102 (74%)
Query: 112 IETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRC 171
+ N R K++G++ + K + E + +HVRARRGQAT+SHSLAERVRR KI+ER+R
Sbjct: 201 LGGNSRGKSTGKQTKEKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRL 260
Query: 172 LQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAA 213
LQ++VPGC K G +MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 261 LQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 302
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 91/144 (63%), Gaps = 5/144 (3%)
Query: 80 CHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKE 139
C +S SK RK + ED +++ +++ NS K + +
Sbjct: 110 CGVTSSKGFNSKKRKRIGKDCEGEED-----KMQKDEQSSNSNVNKTNSEKQASDSLKDG 164
Query: 140 VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSL 199
+H+RARRGQAT+SHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSL
Sbjct: 165 YIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSL 224
Query: 200 QNQVEFLSMKLTAASTFYDFNSES 223
Q Q+EFLSMKL+A + DFN ES
Sbjct: 225 QCQIEFLSMKLSAVNPVLDFNLES 248
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 74/104 (71%)
Query: 109 VSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINER 168
SE R+ +SG+ G E ++ +HVRARRGQATDSHSLAER RR KI+ER
Sbjct: 99 ASESGEGGRENSSGKPAEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISER 158
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTA 212
++ LQD+VPGC K +G ++LDEIINY+QSLQ Q EFLSMKL A
Sbjct: 159 MKTLQDLVPGCNKVIGKALVLDEIINYIQSLQRQAEFLSMKLEA 202
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 70/86 (81%)
Query: 135 EKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIIN 194
E K+ VHVRARRGQATDSHSLAERVRR KI++R++ LQD+VPGC K +G +MLDEIIN
Sbjct: 148 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 207
Query: 195 YVQSLQNQVEFLSMKLTAASTFYDFN 220
YVQSLQ QVEFLSMKL + DF+
Sbjct: 208 YVQSLQQQVEFLSMKLATVNPELDFS 233
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/95 (66%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Query: 128 KGNEKE--EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM 185
KG EKE E+ K+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VP C K G
Sbjct: 15 KGKEKEVAEDPHKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGK 74
Query: 186 TMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
+MLDEIINYVQSLQ QVEFLSMKL+ + +F+
Sbjct: 75 AVMLDEIINYVQSLQRQVEFLSMKLSTVNPQMEFD 109
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
Query: 127 VKG-NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM 185
VKG N K E ++ VHVRARRGQATDSHSLAERVRR +I++R++ LQD+VPGC K +G
Sbjct: 177 VKGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGK 236
Query: 186 TMMLDEIINYVQSLQNQVEFLSMKLT 211
+MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 237 ALMLDEIINYVQSLQRQVEFLSMKLA 262
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
Query: 127 VKG-NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM 185
VKG N K E ++ VHVRARRGQATDSHSLAERVRR +I++R++ LQD+VPGC K +G
Sbjct: 177 VKGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGK 236
Query: 186 TMMLDEIINYVQSLQNQVEFLSMKLT 211
+MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 237 ALMLDEIINYVQSLQRQVEFLSMKLA 262
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 72/89 (80%)
Query: 135 EKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIIN 194
E K+ VHVRARRGQATDSHSLAERVRR KI++R++ LQD+VPGC K +G +MLDEIIN
Sbjct: 148 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 207
Query: 195 YVQSLQNQVEFLSMKLTAASTFYDFNSES 223
YVQSLQ QVEFLSMKL + DF++ S
Sbjct: 208 YVQSLQQQVEFLSMKLATVNPELDFSNLS 236
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 70/86 (81%)
Query: 135 EKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIIN 194
E K+ VHVRARRGQATDSHSLAERVRR KI++R++ LQD+VPGC K +G +MLDEIIN
Sbjct: 148 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 207
Query: 195 YVQSLQNQVEFLSMKLTAASTFYDFN 220
YVQSLQ QVEFLSMKL + DF+
Sbjct: 208 YVQSLQQQVEFLSMKLATVNPELDFS 233
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 80/105 (76%), Gaps = 6/105 (5%)
Query: 119 KNSGRR-KRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVP 177
K+SG++ K G+ KE+ +HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VP
Sbjct: 240 KSSGKQIKDNAGSPKED-----YIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVP 294
Query: 178 GCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
GC K G +MLDEIINYVQSLQ QVEFLSMKL + + DFN E
Sbjct: 295 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIE 339
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 80/105 (76%), Gaps = 6/105 (5%)
Query: 119 KNSGRR-KRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVP 177
K+SG++ K G+ KE+ +HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VP
Sbjct: 240 KSSGKQIKDNAGSPKED-----YIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVP 294
Query: 178 GCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
GC K G +MLDEIINYVQSLQ QVEFLSMKL + + DFN E
Sbjct: 295 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIE 339
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 75/99 (75%)
Query: 115 NKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQD 174
N R K++G++ + K + E + +HVRARRGQAT+SHSLAERVRR KI+ER+R LQ+
Sbjct: 51 NSRGKSTGKQTKEKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQE 110
Query: 175 IVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAA 213
+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 111 LVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 149
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 71/93 (76%)
Query: 131 EKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLD 190
E E + +E +HVRARRGQAT+SHSLAER+RR KI+ER++ LQD+VPGC K G +MLD
Sbjct: 236 ETSESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 295
Query: 191 EIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
EIINYVQSLQ QVEFLSMKL + D N E
Sbjct: 296 EIINYVQSLQRQVEFLSMKLATVNPRLDLNIEG 328
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 72/89 (80%)
Query: 135 EKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIIN 194
E K+ VHVRARRGQATDSHSLAERVRR KI++R++ LQD+VPGC K +G +MLDEIIN
Sbjct: 150 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 209
Query: 195 YVQSLQNQVEFLSMKLTAASTFYDFNSES 223
YVQSLQ QVEFLSMKL + DF++ S
Sbjct: 210 YVQSLQQQVEFLSMKLATVNPELDFSNLS 238
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Query: 113 ETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCL 172
ET + + G +K+ K +EEE+ K +HVRARRGQATDSHSL+ERVRR +I+ER+R L
Sbjct: 75 ETKESTRKRGGKKQDKETAEEEEEPKGYIHVRARRGQATDSHSLSERVRRERISERMRML 134
Query: 173 QDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAVETMQK 231
Q +VPGC K G ++LDEIINYV+SLQNQVEFLSM++ + S Y F ES+A + Q
Sbjct: 135 QSLVPGCDKVTGKALILDEIINYVRSLQNQVEFLSMRIASLSPVVYGFGMESEAAFSDQS 194
Query: 232 AK 233
K
Sbjct: 195 HK 196
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 91/137 (66%), Gaps = 15/137 (10%)
Query: 79 VCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSK 138
+ T+ +++ E+K +K E+ + E S +E E K ++ E +K
Sbjct: 81 IVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKK---------------QQMEPTK 125
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QS
Sbjct: 126 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 185
Query: 199 LQNQVEFLSMKLTAAST 215
LQ QVEFLSMKL A ++
Sbjct: 186 LQRQVEFLSMKLEAVNS 202
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 75/104 (72%)
Query: 109 VSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINER 168
SE + + +SG+ G E ++ +HVRARRGQATDSHSLAER RR KI+ER
Sbjct: 103 TSESGKGEGETSSGKLAEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISER 162
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTA 212
++ LQDIVPGC K +G ++LDEIINY+QSLQ QVEFLSMKL A
Sbjct: 163 MKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 206
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 68/82 (82%)
Query: 130 NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
N K E K+ VHVRARRGQATDSHSLAERVRR +I++R++ LQD+VPGC K +G +ML
Sbjct: 191 NAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALML 250
Query: 190 DEIINYVQSLQNQVEFLSMKLT 211
DEIINYVQSLQ QVEFLSMKL
Sbjct: 251 DEIINYVQSLQRQVEFLSMKLA 272
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 80/105 (76%), Gaps = 6/105 (5%)
Query: 119 KNSGRR-KRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVP 177
K+SG++ K G+ KEE +HVRARRGQAT+SHSLAERVRR KI+ER++ LQ++VP
Sbjct: 239 KSSGKQTKDNAGSPKEE-----YIHVRARRGQATNSHSLAERVRREKISERMKYLQNLVP 293
Query: 178 GCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
GC K G +MLDEIINYVQSLQ QVEFLSMKL + + DFN E
Sbjct: 294 GCTKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIE 338
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 91/137 (66%), Gaps = 7/137 (5%)
Query: 82 TVTSTKCESKNRKAVEISESSNEDSSPVS----EIETNKRKKNSGRRKRVKG---NEKEE 134
+V + + + + K + ++ SPV + ++ ++ G+ ++ G N K
Sbjct: 125 SVQAGEQKDPDTKRCKTEGGEGKEGSPVKPKPEQAGSDSSVEDGGQTQKPPGKGKNAKLV 184
Query: 135 EKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIIN 194
E K+ VHVRARRGQATDSHSLAERVRR +I++R++ LQD+VPGC K +G +MLDEIIN
Sbjct: 185 EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 244
Query: 195 YVQSLQNQVEFLSMKLT 211
YVQSLQ QVEFLSMKL
Sbjct: 245 YVQSLQRQVEFLSMKLA 261
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 72/96 (75%), Gaps = 3/96 (3%)
Query: 128 KGNEKEE---EKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMG 184
KG EK +K +HVRARRGQATDSHSLAERVRR KIN+R++ LQD+VP C K G
Sbjct: 278 KGKEKNSNVSQKDDNYIHVRARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNKVTG 337
Query: 185 MTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
+MLDEIINYVQSLQ+QVEFLSMKL + DFN
Sbjct: 338 KAVMLDEIINYVQSLQHQVEFLSMKLATVNPKLDFN 373
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 68/82 (82%)
Query: 130 NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
N K E K+ VHVRARRGQATDSHSLAERVRR +I++R++ LQD+VPGC K +G +ML
Sbjct: 191 NAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALML 250
Query: 190 DEIINYVQSLQNQVEFLSMKLT 211
DEIINYVQSLQ QVEFLSMKL
Sbjct: 251 DEIINYVQSLQRQVEFLSMKLA 272
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 68/82 (82%)
Query: 130 NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
N K E K+ VHVRARRGQATDSHSLAERVRR +I++R++ LQD+VPGC K +G +ML
Sbjct: 191 NAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALML 250
Query: 190 DEIINYVQSLQNQVEFLSMKLT 211
DEIINYVQSLQ QVEFLSMKL
Sbjct: 251 DEIINYVQSLQRQVEFLSMKLA 272
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 90/142 (63%), Gaps = 9/142 (6%)
Query: 82 TVTSTKCESKNRKAVEISES-----SNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEK 136
V + +S N A +ES E+SSP + K+ G+ ++ E E +
Sbjct: 195 VVGGDQVQSANLPADSANESVHSMDKGEESSPATTTAGAGPGKSRGKGEK----EVPESQ 250
Query: 137 SKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYV 196
++ +H+RARRGQAT+SHSLAER+RR KI+ER++ LQD+VPGC K G +MLDEIINYV
Sbjct: 251 KEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYV 310
Query: 197 QSLQNQVEFLSMKLTAASTFYD 218
QSLQ QVEFLSMKL + D
Sbjct: 311 QSLQRQVEFLSMKLATVNPRLD 332
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/93 (68%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
Query: 128 KGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTM 187
K N K EK + +HVRARRGQATDSHSLAERVRR KI+ER+ LQD+VPGC K G
Sbjct: 180 KQNSKASEK-PDYIHVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAG 238
Query: 188 MLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
MLDEIINYVQSLQ QVEFLSMKL A + DF+
Sbjct: 239 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFS 271
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 80/105 (76%), Gaps = 6/105 (5%)
Query: 119 KNSGRR-KRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVP 177
K+SG++ K G+ KE+ +HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VP
Sbjct: 348 KSSGKQIKDNAGSPKED-----YIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVP 402
Query: 178 GCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
GC K G +MLDEIINYVQSLQ QVEFLSMKL + + DFN E
Sbjct: 403 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIE 447
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 94/152 (61%), Gaps = 21/152 (13%)
Query: 80 CHTVTSTKCESKNRKAV------EISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKE 133
C +S SK RK + E + ++ SP S N K NS EK+
Sbjct: 165 CGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTS----NANKTNS---------EKQ 211
Query: 134 EEKSKE--VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDE 191
S + +H+RARRGQAT+SHSLAERVRR KI+ER++ LQD+VPGC K G +MLDE
Sbjct: 212 PSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDE 271
Query: 192 IINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
IINYVQSLQ Q+EFLSMKL+A + DFN ES
Sbjct: 272 IINYVQSLQCQIEFLSMKLSAVNPVLDFNLES 303
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/83 (71%), Positives = 70/83 (84%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+H+RARRGQAT+SHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ
Sbjct: 170 IHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQ 229
Query: 201 NQVEFLSMKLTAASTFYDFNSES 223
Q+EFLSMKL+A + DFN ES
Sbjct: 230 CQIEFLSMKLSAVNPVLDFNLES 252
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 80/105 (76%), Gaps = 6/105 (5%)
Query: 119 KNSGRR-KRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVP 177
K+SG++ K G+ KE+ +HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VP
Sbjct: 297 KSSGKQIKDNAGSPKED-----YIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVP 351
Query: 178 GCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
GC K G +MLDEIINYVQSLQ QVEFLSMKL + + DFN E
Sbjct: 352 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIE 396
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/76 (76%), Positives = 66/76 (86%)
Query: 137 SKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYV 196
+++ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G MMLDEIINYV
Sbjct: 27 TQDYIHVRARRGQATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIINYV 86
Query: 197 QSLQNQVEFLSMKLTA 212
QSLQ QVEFLSMKL A
Sbjct: 87 QSLQRQVEFLSMKLAA 102
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 69/87 (79%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
E + + +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G MLDEII
Sbjct: 136 EVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 195
Query: 194 NYVQSLQNQVEFLSMKLTAASTFYDFN 220
NYVQSLQ QVEFLSMKL A + DFN
Sbjct: 196 NYVQSLQRQVEFLSMKLAAVNPRLDFN 222
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 69/83 (83%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
++ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQ
Sbjct: 64 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLDEIINYVQ 123
Query: 198 SLQNQVEFLSMKLTAASTFYDFN 220
SLQ Q+EFLSMKL A + D++
Sbjct: 124 SLQRQIEFLSMKLAAVNPRLDYS 146
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 71/93 (76%)
Query: 131 EKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLD 190
E E + +E +HVRARRGQAT+SHSLAER+RR KI+ER++ LQD+VPGC K G +MLD
Sbjct: 236 ETYESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 295
Query: 191 EIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
EIINYVQSLQ QVEFLSMKL + D N E
Sbjct: 296 EIINYVQSLQRQVEFLSMKLATVNPRLDLNIEG 328
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 91/137 (66%), Gaps = 15/137 (10%)
Query: 79 VCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSK 138
+ T+ +++ E+K +K E+ + E S +E E K ++ E +K
Sbjct: 87 IVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKK---------------QQMEPTK 131
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QS
Sbjct: 132 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 191
Query: 199 LQNQVEFLSMKLTAAST 215
LQ QVEFLSMKL A ++
Sbjct: 192 LQRQVEFLSMKLEAVNS 208
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 71/94 (75%), Gaps = 5/94 (5%)
Query: 132 KEEEKSKEV-----VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMT 186
KE K+ EV +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K G
Sbjct: 233 KENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKA 292
Query: 187 MMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
MLDEIINYVQSLQ QVEFLSMKL A + DFN
Sbjct: 293 GMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 326
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 86/127 (67%), Gaps = 6/127 (4%)
Query: 86 TKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRA 145
T E+K K ++SSN S +E+ET+ R K + E ++ + +HVRA
Sbjct: 75 TDLEAKRSK---TNKSSNNKGSLRTEVETDSRSAGKAVSKNIPAAEPPKQ---DYIHVRA 128
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G +LDEIINY+QSLQ QVEF
Sbjct: 129 RRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEF 188
Query: 206 LSMKLTA 212
LSMKL A
Sbjct: 189 LSMKLEA 195
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 68/83 (81%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
++ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQ
Sbjct: 68 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 127
Query: 198 SLQNQVEFLSMKLTAASTFYDFN 220
SLQ Q+EFLSMKL A + D+
Sbjct: 128 SLQRQIEFLSMKLAAVNPRLDYG 150
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 100/161 (62%), Gaps = 13/161 (8%)
Query: 62 NLAENFPGNFIQNNMLPVCHTV----TSTKCESKNRKAVEISESSNEDSS---PVSEIET 114
+L+E +P +F P HT S +S + K +++S ++D + V E++
Sbjct: 17 SLSEIWPSHF------PSDHTPRKRRLSPSSDSASNKHIKLSAPESQDQNGALKVGEVDA 70
Query: 115 NKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQD 174
N ++ K + E+ ++ +HVRARRGQATD+HSLAER RR KI+ER++ LQD
Sbjct: 71 TSVAGNKLPQQTPKPSSSEQAPKQDYIHVRARRGQATDNHSLAERARREKISERMKILQD 130
Query: 175 IVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAST 215
+VPGC K +G +LD IINYVQSLQ QVEFLSMKL A S+
Sbjct: 131 LVPGCNKVIGKAFVLDGIINYVQSLQRQVEFLSMKLEAVSS 171
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 91/137 (66%), Gaps = 15/137 (10%)
Query: 79 VCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSK 138
+ T+ +++ E+K +K E+ + E S +E E K ++ E +K
Sbjct: 87 IVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKK---------------QQMEPTK 131
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QS
Sbjct: 132 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 191
Query: 199 LQNQVEFLSMKLTAAST 215
LQ QVEFLSMKL A ++
Sbjct: 192 LQRQVEFLSMKLEAVNS 208
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 87/137 (63%), Gaps = 13/137 (9%)
Query: 76 MLPVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEE 135
M C +V K SK + V +SE ED + G G+++ EE
Sbjct: 82 MFSSCTSVNRLKESSKKKMKVCLSEGETEDG-----------LRREGETSSGGGSKETEE 130
Query: 136 KS--KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
KS K+ +HVRARRGQATD HSLAER RR KI+ER++ LQD++PGC K +G ++LDEII
Sbjct: 131 KSPLKDYIHVRARRGQATDRHSLAERARREKISERMKFLQDLIPGCNKIIGKALVLDEII 190
Query: 194 NYVQSLQNQVEFLSMKL 210
NY+QSLQ QVEFLSMKL
Sbjct: 191 NYIQSLQRQVEFLSMKL 207
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/94 (69%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 128 KGNEKEEEKSK-EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMT 186
K N K E K + +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G
Sbjct: 218 KDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 277
Query: 187 MMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
MLDEIINYVQSLQ QVEFLSMKL A + DFN
Sbjct: 278 GMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 311
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 71/96 (73%), Gaps = 5/96 (5%)
Query: 130 NEKEEEKSKEV-----VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMG 184
N KE K +V +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G
Sbjct: 173 NSKENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITG 232
Query: 185 MTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
MLDEIINYVQSLQ QVEFLSMKL + DFN
Sbjct: 233 KAGMLDEIINYVQSLQKQVEFLSMKLATVNPRLDFN 268
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 69/87 (79%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
E ++ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEII
Sbjct: 7 EPPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 66
Query: 194 NYVQSLQNQVEFLSMKLTAASTFYDFN 220
NYVQSLQ QVEFLSMKL A + D N
Sbjct: 67 NYVQSLQRQVEFLSMKLAAVNPRLDIN 93
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 71/96 (73%), Gaps = 5/96 (5%)
Query: 130 NEKEEEKSKEV-----VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMG 184
N KE K +V +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G
Sbjct: 173 NSKENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITG 232
Query: 185 MTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
MLDEIINYVQSLQ QVEFLSMKL + DFN
Sbjct: 233 KAGMLDEIINYVQSLQKQVEFLSMKLATVNPRLDFN 268
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 69/87 (79%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
E + + +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G MLDEII
Sbjct: 247 EVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 306
Query: 194 NYVQSLQNQVEFLSMKLTAASTFYDFN 220
NYVQSLQ QVEFLSMKL A + DFN
Sbjct: 307 NYVQSLQRQVEFLSMKLAAVNPRLDFN 333
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
Query: 135 EKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIIN 194
E +HVRARRGQATDSHSLAERVRR +I+ER++ LQ +VPGC K G +MLDEIIN
Sbjct: 166 EPPAGYIHVRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIIN 225
Query: 195 YVQSLQNQVEFLSMKLTAAST-FYDFNSESDA 225
YVQSLQNQVEFLSMKL + + YDF + DA
Sbjct: 226 YVQSLQNQVEFLSMKLASVNPLLYDFGMDRDA 257
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 74/98 (75%)
Query: 123 RRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKT 182
R+K+ KG + +S+ +HVRAR+GQAT+ HSLAER+RR KI+ER++ LQD+VPGC K
Sbjct: 154 RKKKGKGASAADGESESYIHVRARKGQATNRHSLAERLRREKISERMKLLQDLVPGCTKV 213
Query: 183 MGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
G +MLDEIINYVQSLQ QVEFLSMKL A + N
Sbjct: 214 TGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPQLGLN 251
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 89 ESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRG 148
+S + K +++ SS E+ +E E + G + + N+ E ++ +HVRARRG
Sbjct: 88 DSGSNKQMKLGGSSVENDGFKAEAEASSA---GGNKSSEQSNKPCEAPKQDYIHVRARRG 144
Query: 149 QATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
QATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QSLQ QVEFLSM
Sbjct: 145 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 204
Query: 209 KLTAASTFYDFNSESDA 225
KL A ++ + N D
Sbjct: 205 KLEAVNSRMNMNPTIDG 221
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 73/95 (76%)
Query: 121 SGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCY 180
SG+ + G E ++ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC
Sbjct: 106 SGKPAKQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 165
Query: 181 KTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAST 215
K +G ++LDEIINY+QSLQ QVEFLSMKL A ++
Sbjct: 166 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 200
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 127 bits (318), Expect = 7e-27, Method: Composition-based stats.
Identities = 68/124 (54%), Positives = 83/124 (66%), Gaps = 8/124 (6%)
Query: 99 SESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAE 158
S+ E+SSP + N G+ K E E + +E +HVRARRGQAT+SHSLAE
Sbjct: 593 SKDKGEESSPAT--------TNGGKSKGKGAKETSESQKEEYIHVRARRGQATNSHSLAE 644
Query: 159 RVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYD 218
R+RR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL + D
Sbjct: 645 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD 704
Query: 219 FNSE 222
N E
Sbjct: 705 LNIE 708
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 71/94 (75%), Gaps = 5/94 (5%)
Query: 132 KEEEKSKEV-----VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMT 186
KE K+ EV +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K G
Sbjct: 233 KENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKA 292
Query: 187 MMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
MLDEIINYVQSLQ QVEFLSMKL A + DFN
Sbjct: 293 GMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 326
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 77/107 (71%), Gaps = 6/107 (5%)
Query: 111 EIETNKRKKNSGRRKRVKGNE------KEEEKSKEVVHVRARRGQATDSHSLAERVRRGK 164
++ T+ + +G KG E E + K+ +HVRARRGQATDSHSLAERVRR K
Sbjct: 240 KLSTDAARDEAGSHGNGKGKEVAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREK 299
Query: 165 INERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLT 211
I+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL+
Sbjct: 300 ISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFLSMKLS 346
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
EE +HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC + G ++LDEII
Sbjct: 136 EEVPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEII 195
Query: 194 NYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAV 226
NYVQSLQNQVEFLSMKL + + F+DF + D +
Sbjct: 196 NYVQSLQNQVEFLSMKLASVNPIFFDFAMDLDTL 229
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 77/107 (71%), Gaps = 6/107 (5%)
Query: 111 EIETNKRKKNSGRRKRVKGNE------KEEEKSKEVVHVRARRGQATDSHSLAERVRRGK 164
++ T+ + +G KG E E + K+ +HVRARRGQATDSHSLAERVRR K
Sbjct: 220 KLSTDAARDEAGSHGNGKGKEVAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREK 279
Query: 165 INERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLT 211
I+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL+
Sbjct: 280 ISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFLSMKLS 326
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 98/168 (58%), Gaps = 26/168 (15%)
Query: 70 NFIQNNMLPVCHTVTST------KCESKN------------RKAVEISESSNEDSSPVSE 111
NF QNN V +TV + + +S+N RK VE+ + ++
Sbjct: 135 NFAQNNGAGVQNTVKNVEDAQDHRQDSENGVLGASPNGKRKRKNVEVEKQKDQTRDLAEL 194
Query: 112 IETNKRKKNSGRRKR-------VKGNEKEEEKSKE-VVHVRARRGQATDSHSLAERVRRG 163
+ KKNSG R K N E SKE +HVRA+RGQAT+SHSLAERVRR
Sbjct: 195 PKEYDEKKNSGPSSRSRQAVKEAKDNSSGAEASKENYIHVRAKRGQATNSHSLAERVRRE 254
Query: 164 KINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLT 211
+I+ER+R LQ++VPGC K G +MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 255 RISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 302
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 85/137 (62%), Gaps = 3/137 (2%)
Query: 78 PVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRR--KRVKGNEKEEE 135
P +T S E E SE S E +I+ N G++ K K N E
Sbjct: 197 PPLNTSKSADGEQPKGLPWENSEFSKEQEEKKLKIDQNMSPNLRGKQPNKHAKDNSSNGE 256
Query: 136 KSKE-VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIIN 194
KE +HVRARRGQAT+SHSLAERVRR KI+ER+R LQ++VPGC K G +MLDEIIN
Sbjct: 257 APKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 316
Query: 195 YVQSLQNQVEFLSMKLT 211
YVQSLQ QVEFLSMKL
Sbjct: 317 YVQSLQQQVEFLSMKLA 333
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 75/99 (75%), Gaps = 10/99 (10%)
Query: 123 RRKRVK--GNEK-----EEEKS---KEVVHVRARRGQATDSHSLAERVRRGKINERLRCL 172
+R RV GN++ EEEKS K+ +HVRARRGQATDSHSLAERVRR KI ER++ L
Sbjct: 228 KRPRVSDGGNDENAGAVEEEKSEPVKDYIHVRARRGQATDSHSLAERVRREKIGERMKLL 287
Query: 173 QDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLT 211
Q +VP C K G +MLDEIINYVQSLQ QVEFLSMKL+
Sbjct: 288 QSLVPSCNKITGKALMLDEIINYVQSLQRQVEFLSMKLS 326
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 109/193 (56%), Gaps = 25/193 (12%)
Query: 54 DNFFEFPGNLAENFPG--NFIQNNMLPVCHTVTSTKCESKNRKAVEISESSNEDSSPVSE 111
D+ F +LAE +PG +F ++ L T T+ + A E+ S+ + ++
Sbjct: 8 DSTFSPAYSLAEIWPGMPHFPDHSHL----TATAPTKGKDSTAADEVLSSTTTANLSNND 63
Query: 112 IETNKRKKNSG------------RRKRVKGNEKEEEKSK-------EVVHVRARRGQATD 152
+NKR K G V GN+ E+ +K + +HVRARRGQATD
Sbjct: 64 SGSNKRMKVGGSSFENDGFKAEAEASSVGGNKSSEQSNKPCEAPKPDYIHVRARRGQATD 123
Query: 153 SHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTA 212
SHSLAER RR KI+ER++ LQD+ PGC K +G ++LDEIINY+QSLQ QVEFLSMKL A
Sbjct: 124 SHSLAERARREKISERMKILQDLAPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 183
Query: 213 ASTFYDFNSESDA 225
++ + N D
Sbjct: 184 VNSRMNTNPTIDG 196
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 95/152 (62%), Gaps = 6/152 (3%)
Query: 79 VCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSK 138
V T ++ N K +IS S NE++ +EIE + N + ++ E +
Sbjct: 82 VSTTTSAHDLNDLNGKRRKISGSRNENNDSRAEIEASSAANN---KPAEPSSKPSEPPMQ 138
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVR+RRGQATDSHSLAER RR +I ER++ LQD+VPGC K +G + LDEIINY+QS
Sbjct: 139 DYIHVRSRRGQATDSHSLAERARRERIGERMKILQDLVPGCNKVIGKALALDEIINYIQS 198
Query: 199 LQNQVEFLSMKLTAASTFYDFNSESDAVETMQ 230
LQ QVEFLSMKL A ++ S S A+E +
Sbjct: 199 LQCQVEFLSMKLEAVNSRM---STSPAIEGLH 227
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 84/127 (66%), Gaps = 9/127 (7%)
Query: 100 ESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAER 159
+S E S +E E R + + K+ K + + K + +HVRARRGQATDSHSLAER
Sbjct: 90 KSKQESRSSGAEEEGTARGGATSKNKK-KASGSDAPKETDYIHVRARRGQATDSHSLAER 148
Query: 160 VRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAA------ 213
VRR +I+ER++ LQ++VPGC K MG LDEIINYVQSLQ QVEFLSMKL AA
Sbjct: 149 VRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQVEFLSMKLAAAEPRMHL 208
Query: 214 --STFYD 218
S F+D
Sbjct: 209 SSSNFFD 215
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Query: 117 RKKNSGRRKRVKGNEKEEEKSKE-VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDI 175
R K S ++ + N + E KE +HVRARRGQAT+SHSLAERVRR KI+ER+R LQ++
Sbjct: 242 RGKQSVKQAKDNNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQEL 301
Query: 176 VPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
VPGC K G +MLDEIINYVQSLQ QVEFLSMKL + +F+
Sbjct: 302 VPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFD 346
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 69/86 (80%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
++ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQ
Sbjct: 117 QDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQ 176
Query: 198 SLQNQVEFLSMKLTAASTFYDFNSES 223
+LQ QVEFLSMKL A + D N E
Sbjct: 177 ALQCQVEFLSMKLAAVNPQLDCNVEG 202
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 74/92 (80%), Gaps = 5/92 (5%)
Query: 129 GNEKEEEK-----SKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTM 183
G E E++K +K+ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +
Sbjct: 117 GTETEQKKLQIEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 176
Query: 184 GMTMMLDEIINYVQSLQNQVEFLSMKLTAAST 215
G ++LDEIINY+QSLQ QVEFLSMKL A ++
Sbjct: 177 GKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 208
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 130 NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
N K EK + +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G ML
Sbjct: 173 NSKASEK-PDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGML 231
Query: 190 DEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
DEIINYVQSLQ QVEFLSMKL A + D +
Sbjct: 232 DEIINYVQSLQRQVEFLSMKLAAVNPRLDLS 262
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 88/122 (72%), Gaps = 8/122 (6%)
Query: 101 SSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSK-------EVVHVRARRGQATDS 153
S++ D++ ++E + NKR K G + + + EE +K + +HVRARRGQATDS
Sbjct: 96 STSNDANAMNEGD-NKRLKTGGSNENHESKAEGEETAKPAEPPKQDYIHVRARRGQATDS 154
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAA 213
HSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QSLQ QVEFLSMKL A
Sbjct: 155 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 214
Query: 214 ST 215
++
Sbjct: 215 NS 216
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 107/183 (58%), Gaps = 20/183 (10%)
Query: 58 EFPGNLAENFPGNFIQNNMLPVCHTVTSTKCE---SKNRKAVEISESSNEDSSPVSEIET 114
E+P + + G F + V + S C S RK+ ++ E P + +
Sbjct: 56 EWPDMSSACYAGGFGATPVQEVSNGGNSFSCSGGGSTKRKSDAYLDAKGECKRPRGKQQV 115
Query: 115 NKRKKNSGRRK---------RVKGN---EKEEEKSK-----EVVHVRARRGQATDSHSLA 157
+ ++SGR K R KG+ +K++ ++ + +HVRARRGQATDSHSLA
Sbjct: 116 CELDQSSGRGKPEKAKPAGTRKKGDVAAQKQDPRAAGGQKTDYIHVRARRGQATDSHSLA 175
Query: 158 ERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFY 217
ERVRR +I+ER+R LQ++VPGC K G MLDEIINYVQSLQ QVEFLSMK+ A++
Sbjct: 176 ERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVV 235
Query: 218 DFN 220
+F+
Sbjct: 236 NFD 238
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 80/113 (70%), Gaps = 3/113 (2%)
Query: 100 ESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAER 159
+SSN + S +E ET+ R K + E ++ + +HVRARRGQATDSHSLAER
Sbjct: 84 KSSNNNGSLRTEAETDPRSAGKAVSKSLPAAEPPKQ---DYIHVRARRGQATDSHSLAER 140
Query: 160 VRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTA 212
RR KI+ER++ LQD+VPGC K +G +LDEIINY+QSLQ QVEFLSMKL A
Sbjct: 141 ARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLSMKLEA 193
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 65/75 (86%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
++ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQ
Sbjct: 71 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 130
Query: 198 SLQNQVEFLSMKLTA 212
SLQ Q+EFLSMKL A
Sbjct: 131 SLQRQIEFLSMKLAA 145
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 76/105 (72%), Gaps = 3/105 (2%)
Query: 122 GRRKRVK--GNEKEEEKSK-EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
G K+ K NE EE K VHVRARRGQATDSHSLAER RR KIN R++ LQ++VPG
Sbjct: 173 GSTKKCKNASNETSEEAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPG 232
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
C K G ++LDEII++VQSLQ QVEFLSM+L A + DFN +S
Sbjct: 233 CNKISGTALVLDEIISHVQSLQRQVEFLSMRLAAVNPRIDFNLDS 277
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 83/121 (68%), Gaps = 4/121 (3%)
Query: 92 NRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKE-VVHVRARRGQA 150
N+KAVE ED S+ K K + + K + + EE KE +H+RARRGQA
Sbjct: 155 NKKAVE---EFQEDPQRGSDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMRARRGQA 211
Query: 151 TDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKL 210
T+SHSLAERVRR KI+ER+R LQ++VPGC K G +MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 212 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKL 271
Query: 211 T 211
Sbjct: 272 A 272
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 84/123 (68%), Gaps = 10/123 (8%)
Query: 107 SPVSEIETNKRK---------KNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLA 157
SP + ET +++ K +G+ + + ++ + +E +HVRARRGQAT+SHSLA
Sbjct: 325 SPKDDAETQRKRDQNPNSTANKGTGKHGK-QASQPSDPPKEEYIHVRARRGQATNSHSLA 383
Query: 158 ERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFY 217
ERVRR KI+ER++ LQ++VPGC K G +MLDEIINYVQSLQ QVEFLSMKL +
Sbjct: 384 ERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 443
Query: 218 DFN 220
D N
Sbjct: 444 DIN 446
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 88/127 (69%), Gaps = 6/127 (4%)
Query: 86 TKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRA 145
T E+K KA S+SS ++SS +E ET+ R + + + E ++ +HVRA
Sbjct: 85 TDSEAKRFKA---SKSSGDNSSLRTEAETDSRNAS---KSGDQNPPPPEPPKQDYIHVRA 138
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G +LDEIINY+Q+LQ QVEF
Sbjct: 139 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEF 198
Query: 206 LSMKLTA 212
LSMKL A
Sbjct: 199 LSMKLEA 205
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 84/123 (68%), Gaps = 10/123 (8%)
Query: 107 SPVSEIETNKRK---------KNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLA 157
SP + ET +++ K +G+ + + ++ + +E +HVRARRGQAT+SHSLA
Sbjct: 281 SPKDDAETQRKRDQNPNSTANKGTGKHGK-QASQPSDPPKEEYIHVRARRGQATNSHSLA 339
Query: 158 ERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFY 217
ERVRR KI+ER++ LQ++VPGC K G +MLDEIINYVQSLQ QVEFLSMKL +
Sbjct: 340 ERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 399
Query: 218 DFN 220
D N
Sbjct: 400 DIN 402
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 135 EKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIIN 194
E +HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G +MLDEII+
Sbjct: 172 EPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIIS 231
Query: 195 YVQSLQNQVEFLSMKLTAASTF-YDFNSESDAVETMQKAKAYKAKEMERLMKE 246
YVQSLQNQVEFLSMKL + S Y+F D + + A EM + M +
Sbjct: 232 YVQSLQNQVEFLSMKLASLSPLMYEFGPGIDMHPDVLRQLAKMPHEMVQCMGQ 284
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 71/86 (82%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QS
Sbjct: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
Query: 199 LQNQVEFLSMKLTAASTFYDFNSESD 224
LQ+QVEFLSMKL A ++ ++ N D
Sbjct: 147 LQHQVEFLSMKLEAVNSRFNMNPTID 172
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 88/127 (69%), Gaps = 6/127 (4%)
Query: 86 TKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRA 145
T E+K KA S+SS ++SS +E ET+ R + + + E ++ +HVRA
Sbjct: 85 TDSEAKRFKA---SKSSGDNSSLRTEAETDSRNAS---KSGDQNPPPPEPPKQDYIHVRA 138
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G +LDEIINY+Q+LQ QVEF
Sbjct: 139 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEF 198
Query: 206 LSMKLTA 212
LSMKL A
Sbjct: 199 LSMKLEA 205
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 72/92 (78%)
Query: 132 KEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDE 191
++EE VHVRARRGQATDSHSLAER RR KIN+R++ LQ++VPGC K G ++LDE
Sbjct: 166 QQEEDMLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDE 225
Query: 192 IINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
IIN+VQSLQ QVEFLSM+L A + DFN +S
Sbjct: 226 IINHVQSLQCQVEFLSMRLAAVNPRIDFNLDS 257
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 76/104 (73%)
Query: 117 RKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIV 176
R K S ++ + ++ E + +HVRARRGQAT+SHSLAERVRR KI+ER+R LQ++V
Sbjct: 237 RGKQSVKQAKDNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELV 296
Query: 177 PGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
PGC K G +MLDEIINYVQSLQ QVEFLSMKL + +F+
Sbjct: 297 PGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFD 340
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 72/96 (75%)
Query: 120 NSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGC 179
+SG+ E ++ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC
Sbjct: 123 SSGKPAEQSAKPASEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 182
Query: 180 YKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAST 215
K +G ++LDEIINY+QSLQ QVEFLSMKL A ++
Sbjct: 183 NKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 218
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 69/86 (80%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAERVRR +I+ER+R LQ++VPGC K G MLDEIINYVQS
Sbjct: 146 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQS 205
Query: 199 LQNQVEFLSMKLTAASTFYDFNSESD 224
LQ QVEFLSMK+ AA+ +FN D
Sbjct: 206 LQKQVEFLSMKIAAANPVVNFNIVDD 231
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 98/157 (62%), Gaps = 7/157 (4%)
Query: 84 TSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHV 143
T + +SK K+ E + N+DS +E T+ + R+ + + K E K+ +HV
Sbjct: 161 TENESKSKRPKSAE-AMKENDDSKSDAEQRTHTGRPEVNPRQSEQ-SAKPPEPPKDYIHV 218
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATD HSLAERVRR KI ER++ LQD+VPGC K G +M+DEIINYVQSLQ QV
Sbjct: 219 RARRGQATDRHSLAERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIINYVQSLQCQV 278
Query: 204 EFLSMKLTAASTFYDFNSES----DAVE-TMQKAKAY 235
EFLSMKL A + N E D +E + AKAY
Sbjct: 279 EFLSMKLEAVNPKLACNMEGFLARDMLEPSFNTAKAY 315
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 125 KRVKGNEKEEEKSKE-VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTM 183
K V+ N + E K+ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +
Sbjct: 119 KHVEQNTQPPELPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 178
Query: 184 GMTMMLDEIINYVQSLQNQVEFLSMKLTAAST 215
G ++LDEIINY+QSLQ QVEFLSMKL A +T
Sbjct: 179 GKALVLDEIINYIQSLQRQVEFLSMKLEAVNT 210
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 67/79 (84%)
Query: 136 KSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINY 195
K ++ VHVRA+RGQAT+SHSLAER RR KINER++ LQD+VPGC K G MMLDEIINY
Sbjct: 116 KREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 175
Query: 196 VQSLQNQVEFLSMKLTAAS 214
VQSLQ QVEFLSMKL+A S
Sbjct: 176 VQSLQRQVEFLSMKLSAIS 194
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 69/82 (84%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
E+ ++ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEII
Sbjct: 162 EQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 221
Query: 194 NYVQSLQNQVEFLSMKLTAAST 215
NY+QSLQ QVEFLSMKL A ++
Sbjct: 222 NYIQSLQRQVEFLSMKLEAVNS 243
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 76/105 (72%), Gaps = 5/105 (4%)
Query: 124 RKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTM 183
R + N ++ ++ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K
Sbjct: 422 RAHKENNSSKDHAKQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCSKVT 481
Query: 184 GMTMMLDEIINYVQSLQNQVEFLSMKLTA-----ASTFYDFNSES 223
G +MLDEIINYVQSLQ QVE LSMKL + +ST D N E+
Sbjct: 482 GKAVMLDEIINYVQSLQRQVENLSMKLASVNPGPSSTRIDHNFET 526
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 88/127 (69%), Gaps = 6/127 (4%)
Query: 86 TKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRA 145
T E+K KA S+SS ++SS +E ET+ R + + + E ++ +HVRA
Sbjct: 44 TDSEAKRFKA---SKSSGDNSSLRTEAETDSRNAS---KSGDQNPPPPEPPKQDYIHVRA 97
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G +LDEIINY+Q+LQ QVEF
Sbjct: 98 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEF 157
Query: 206 LSMKLTA 212
LSMKL A
Sbjct: 158 LSMKLEA 164
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Query: 120 NSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGC 179
+ ++ + +G+++EEEK VHVRARRGQATDSHSLAER RR KIN+R++ LQ++VPGC
Sbjct: 160 GASKKSKNEGSQQEEEKLP-YVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGC 218
Query: 180 YKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
K G ++LDEIIN+VQ LQ QVE LSM+L A + DFN +S
Sbjct: 219 NKISGTALVLDEIINHVQFLQRQVEILSMRLAAVNPRIDFNLDS 262
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
Query: 125 KRVKGNEKEEEKSKE-VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTM 183
K+ K N E KE +HVRARRGQAT+SHSLAERVRR KI+ER+R LQ++VPGC K
Sbjct: 223 KQAKENSHSGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKIT 282
Query: 184 GMTMMLDEIINYVQSLQNQVEFLSMKLT 211
G +MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 283 GKAVMLDEIINYVQSLQQQVEFLSMKLA 310
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 87/123 (70%), Gaps = 8/123 (6%)
Query: 94 KAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKE-VVHVRARRGQATD 152
K ++ S S +E+ +E+ET+ K V+ N + + K+ +HVRARRGQATD
Sbjct: 108 KRLKTSGSRDENRDSKTEVETSSGKP-------VEQNPQSADPPKQDFIHVRARRGQATD 160
Query: 153 SHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTA 212
SHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QSLQ QVEFLSMKL A
Sbjct: 161 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 220
Query: 213 AST 215
++
Sbjct: 221 VNS 223
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 125 KRVKGNEKEEEKSKE-VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTM 183
K V+ + E SK+ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +
Sbjct: 55 KHVEHKTQPPEPSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 114
Query: 184 GMTMMLDEIINYVQSLQNQVEFLSMKLTAAST 215
G ++LDEIINY+QSLQ QVEFLSMKL A +T
Sbjct: 115 GKALVLDEIINYIQSLQRQVEFLSMKLEAVNT 146
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 68/82 (82%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAERVRR +I+ER+R LQ++VPGC K G MLDEIINYVQS
Sbjct: 160 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQS 219
Query: 199 LQNQVEFLSMKLTAASTFYDFN 220
LQ QVEFLSMK+ A++ +FN
Sbjct: 220 LQKQVEFLSMKIAASNPVVNFN 241
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 68/82 (82%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAERVRR +I+ER+R LQ++VPGC K G MLDEIINYVQS
Sbjct: 160 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQS 219
Query: 199 LQNQVEFLSMKLTAASTFYDFN 220
LQ QVEFLSMK+ A++ +FN
Sbjct: 220 LQKQVEFLSMKIAASNPVVNFN 241
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 83/121 (68%), Gaps = 4/121 (3%)
Query: 92 NRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKE-VVHVRARRGQA 150
N+KAVE ED ++ K K + + K + + EE KE +H+RARRGQA
Sbjct: 157 NKKAVE---EFQEDPQRGNDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMRARRGQA 213
Query: 151 TDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKL 210
T+SHSLAERVRR KI+ER+R LQ++VPGC K G +MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 214 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKL 273
Query: 211 T 211
Sbjct: 274 A 274
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 83/121 (68%), Gaps = 4/121 (3%)
Query: 92 NRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKE-VVHVRARRGQA 150
N+KAVE ED ++ K K + + K + + EE KE +H+RARRGQA
Sbjct: 105 NKKAVE---EFQEDPQRGNDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMRARRGQA 161
Query: 151 TDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKL 210
T+SHSLAERVRR KI+ER+R LQ++VPGC K G +MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 162 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKL 221
Query: 211 T 211
Sbjct: 222 A 222
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 69/86 (80%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAERVRR +I+ER+R LQ++VPGC K G MLDEIINYVQS
Sbjct: 160 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQS 219
Query: 199 LQNQVEFLSMKLTAASTFYDFNSESD 224
LQ QVEFLSMK+ A++ +FN D
Sbjct: 220 LQKQVEFLSMKIAASNPVVNFNIVED 245
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 77/105 (73%), Gaps = 6/105 (5%)
Query: 125 KRVKGNEKEEEKSKE------VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
K+VKG+ K + KS E VHVRARRGQATDSHSLAER RR KIN R++ L+++VPG
Sbjct: 9 KKVKGSTKMKSKSSEENGKLPYVHVRARRGQATDSHSLAERARREKINARMKLLRELVPG 68
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
C K G ++LDEIIN+VQSLQ QVE LSM+L A + DFN ++
Sbjct: 69 CDKIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDT 113
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 70/87 (80%), Gaps = 2/87 (2%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
+E VHVRA+RGQAT+SHSLAER RR KINER++ LQD+VPGC K G MMLDEIINYVQ
Sbjct: 120 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 179
Query: 198 SLQNQVEFLSMKLTAASTFYDFNSESD 224
SLQ QVEFLSMKL+ S + NS+ D
Sbjct: 180 SLQRQVEFLSMKLSTISP--ELNSDLD 204
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 73/94 (77%), Gaps = 2/94 (2%)
Query: 133 EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEI 192
EEE ++ +H+RARRGQAT+SHSLAERVRR KI+ER+R LQ++VPGC K G MLDEI
Sbjct: 38 EEEPKEKYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAFMLDEI 97
Query: 193 INYVQSLQNQVEFLSMKLTAASTFYDFNSESDAV 226
INY+QSLQ QVEFLSMKL A+ D N + D +
Sbjct: 98 INYIQSLQQQVEFLSMKL--ATVNPDINIDIDRI 129
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 71/87 (81%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
E ++ +HVRARRGQATDSHS+AER RR KI+ER++ LQD+VPGC K +G ++LDEII
Sbjct: 110 EPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEII 169
Query: 194 NYVQSLQNQVEFLSMKLTAASTFYDFN 220
NY+QSLQ+QVEFLSMKL A ++ + N
Sbjct: 170 NYIQSLQHQVEFLSMKLEAVNSRANMN 196
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 66/79 (83%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
E ++ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G +LDEII
Sbjct: 119 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEII 178
Query: 194 NYVQSLQNQVEFLSMKLTA 212
NY+QSLQ+QVEFLSMKL A
Sbjct: 179 NYIQSLQHQVEFLSMKLEA 197
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 123 bits (309), Expect = 7e-26, Method: Composition-based stats.
Identities = 63/100 (63%), Positives = 74/100 (74%), Gaps = 2/100 (2%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
+E VHVRA+RGQAT+SHSLAER RR KINER++ LQD+VPGC K G MMLDEIINYVQ
Sbjct: 623 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 682
Query: 198 SLQNQVEFLSMKLTAASTFYDFNSESDAVETMQKAKAYKA 237
SLQ QVEFLSMKL+ S + NS+ D + + A A
Sbjct: 683 SLQRQVEFLSMKLSTISP--ELNSDLDLQDILCSQDARSA 720
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 123 bits (309), Expect = 7e-26, Method: Composition-based stats.
Identities = 63/100 (63%), Positives = 74/100 (74%), Gaps = 2/100 (2%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
+E VHVRA+RGQAT+SHSLAER RR KINER++ LQD+VPGC K G MMLDEIINYVQ
Sbjct: 623 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 682
Query: 198 SLQNQVEFLSMKLTAASTFYDFNSESDAVETMQKAKAYKA 237
SLQ QVEFLSMKL+ S + NS+ D + + A A
Sbjct: 683 SLQRQVEFLSMKLSTISP--ELNSDLDLQDILCSQDARSA 720
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 70/87 (80%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
E ++ +HVRARRGQATDSHSLAER RR +I+ER++ LQD+VPGC K +G ++LDEII
Sbjct: 84 EPPKQDYIHVRARRGQATDSHSLAERARRERISERMKILQDLVPGCNKVIGKALVLDEII 143
Query: 194 NYVQSLQNQVEFLSMKLTAASTFYDFN 220
NY+QSLQ QVEFLSMKL A ++ + N
Sbjct: 144 NYIQSLQQQVEFLSMKLEAVNSRINVN 170
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 77/116 (66%), Gaps = 11/116 (9%)
Query: 99 SESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAE 158
S S E + VS+ E N K R ++ VH+RA+RGQAT++HSLAE
Sbjct: 85 SMHSQEGTGAVSKREVNSEKAGDAESNR-----------EDYVHIRAKRGQATNNHSLAE 133
Query: 159 RVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS 214
R RR KINER++ LQD+VPGC K G MMLDEIINYVQSLQ QVEFLSMKL+A S
Sbjct: 134 RFRREKINERMKHLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSAVS 189
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 89/123 (72%), Gaps = 8/123 (6%)
Query: 94 KAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKE-VVHVRARRGQATD 152
K ++ S S +E+ +E+ET+ SG K V+ N + + K+ +HVRARRGQATD
Sbjct: 39 KRLKTSGSRDENRDSKTEVETS-----SG--KPVEQNPQSADPPKQDFIHVRARRGQATD 91
Query: 153 SHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTA 212
SHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QSLQ QVEFLSMKL A
Sbjct: 92 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 151
Query: 213 AST 215
++
Sbjct: 152 VNS 154
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 87/123 (70%), Gaps = 8/123 (6%)
Query: 94 KAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKE-VVHVRARRGQATD 152
K ++ S S +E+ +E+ET+ K V+ N + + K+ +HVRARRGQATD
Sbjct: 108 KRLKTSGSRDENRDSKTEVETSSGKP-------VEQNPQSADPPKQDFIHVRARRGQATD 160
Query: 153 SHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTA 212
SHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QSLQ QVEFLSMKL A
Sbjct: 161 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 220
Query: 213 AST 215
++
Sbjct: 221 VNS 223
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 64/74 (86%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
++ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQ
Sbjct: 59 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 118
Query: 198 SLQNQVEFLSMKLT 211
SLQ QVEFLSMKL
Sbjct: 119 SLQRQVEFLSMKLA 132
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 135 EKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIIN 194
E +HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G +MLDEII+
Sbjct: 172 EPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIIS 231
Query: 195 YVQSLQNQVEFLSMKLTAASTF-YDFNSESDAVETMQKAKAYKAKEMERLMKE 246
YVQSLQNQVEFLSMKL + + Y+F D + + A EM + M +
Sbjct: 232 YVQSLQNQVEFLSMKLASLNPLMYEFGPGIDMHPDVLRQLAKMPHEMVQCMGQ 284
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 89/131 (67%), Gaps = 4/131 (3%)
Query: 85 STKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVR 144
+T E+K K ++ S NE+S+ +E E + N + + N+ E ++ +HVR
Sbjct: 77 ATDSEAKRLKGMK-SGDGNENSNSKTEAEASSGLCN---KLADQSNQPSEAPKQDYIHVR 132
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARRGQATDSHSLAER RR KI+ER+ LQD+VPGC K +G +LDEIINY+Q+LQ QVE
Sbjct: 133 ARRGQATDSHSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQVE 192
Query: 205 FLSMKLTAAST 215
FLSMKL A ++
Sbjct: 193 FLSMKLEAVNS 203
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 88/134 (65%), Gaps = 3/134 (2%)
Query: 79 VCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSK 138
V T ++ N K +IS S +E++ +E E + N + K +E ++
Sbjct: 23 VSTTTSANDLNDSNGKRRKISGSRSENNDSRAETEASSAANNKTAEQSSKPSEPPKQ--- 79
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAER RR KI+ER+ LQD+VPGC K +G ++LDEIINY+QS
Sbjct: 80 DYIHVRARRGQATDSHSLAERARREKISERMNMLQDLVPGCNKVIGKALVLDEIINYIQS 139
Query: 199 LQNQVEFLSMKLTA 212
LQ QVEFLSMKL A
Sbjct: 140 LQCQVEFLSMKLEA 153
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 85/138 (61%), Gaps = 24/138 (17%)
Query: 101 SSNEDSSPVSEIETNKRKKNSGRRKRVKGN--EKEEEKSKEVVHVRARRGQATDSHSLAE 158
+ +ED+ PV+ ++G KG + E K+ +HVRARRGQATDSHSLAE
Sbjct: 109 AGDEDTKPVA--------GDAGHGGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAE 160
Query: 159 RVRRGKINERLRCLQDIVPGCYKTM--------------GMTMMLDEIINYVQSLQNQVE 204
RVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ QVE
Sbjct: 161 RVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVE 220
Query: 205 FLSMKLTAASTFYDFNSE 222
FLSMKL+ + DF+ +
Sbjct: 221 FLSMKLSTVNPQLDFDVD 238
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 69/82 (84%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
E+ ++ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEII
Sbjct: 38 EQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 97
Query: 194 NYVQSLQNQVEFLSMKLTAAST 215
NY+QSLQ QVEFLSMKL A ++
Sbjct: 98 NYIQSLQRQVEFLSMKLEAVNS 119
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 78/107 (72%), Gaps = 8/107 (7%)
Query: 113 ETNKRKKNSG---RRKRVKGNEKEEEKSKEV-----VHVRARRGQATDSHSLAERVRRGK 164
+T K ++N G R K+ K++ +S EV HVRARRGQAT+SHSLAERVRR K
Sbjct: 125 KTQKTEQNPGPNLRGKQAAKQAKDDTQSGEVPKENYFHVRARRGQATNSHSLAERVRREK 184
Query: 165 INERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLT 211
I+ER+R LQ++VPGC K G +MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 185 ISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 231
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 67/83 (80%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
++ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +ML+EIINYVQ
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQ 60
Query: 198 SLQNQVEFLSMKLTAASTFYDFN 220
SLQ Q+EFLSMKL A D N
Sbjct: 61 SLQRQIEFLSMKLAAVDPRLDIN 83
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 70/87 (80%), Gaps = 2/87 (2%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
+E VHVRA+RGQAT+SHSLAER RR KINER++ LQD+VPGC K G MMLDEIINYVQ
Sbjct: 623 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 682
Query: 198 SLQNQVEFLSMKLTAASTFYDFNSESD 224
SLQ QVEFLSMKL+ S + NS+ D
Sbjct: 683 SLQRQVEFLSMKLSTISP--ELNSDLD 707
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 70/88 (79%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAERVRR +I+ER+R LQ++VPGC K G MLDEIINYVQS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 199 LQNQVEFLSMKLTAASTFYDFNSESDAV 226
LQ QVEFLSMK+ A++ F S S A+
Sbjct: 202 LQKQVEFLSMKIAASNPVVSFASLSGAM 229
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 67/82 (81%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAERVRR +I+ER+R LQ++VPGC K G MLDEIINYVQS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 199 LQNQVEFLSMKLTAASTFYDFN 220
LQ QVEFLSMK+ A++ F+
Sbjct: 202 LQKQVEFLSMKIAASNPVVSFD 223
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Query: 132 KEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDE 191
KE EK+ + +HVRARRGQATDSHS+AERVRR KI+ER++ LQD+VPGC K G MLDE
Sbjct: 162 KELEKT-DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDE 220
Query: 192 IINYVQSLQNQVEFLSMKLTAASTFYDFN 220
IINYVQSLQ Q+EFLSMKL + DF+
Sbjct: 221 IINYVQSLQRQIEFLSMKLAIVNPRPDFD 249
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Query: 132 KEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDE 191
KE EK+ + +HVRARRGQATDSHS+AERVRR KI+ER++ LQD+VPGC K G MLDE
Sbjct: 162 KELEKT-DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDE 220
Query: 192 IINYVQSLQNQVEFLSMKLTAASTFYDFN 220
IINYVQSLQ Q+EFLSMKL + DF+
Sbjct: 221 IINYVQSLQRQIEFLSMKLAIVNPRPDFD 249
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Query: 132 KEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDE 191
KE EK+ + +HVRARRGQATDSHS+AERVRR KI+ER++ LQD+VPGC K G MLDE
Sbjct: 159 KELEKT-DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDE 217
Query: 192 IINYVQSLQNQVEFLSMKLTAASTFYDFN 220
IINYVQSLQ Q+EFLSMKL + DF+
Sbjct: 218 IINYVQSLQRQIEFLSMKLAVVNPRPDFD 246
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 66/77 (85%)
Query: 136 KSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINY 195
K ++ VHVRA+RGQAT+SHSLAER RR KINER++ LQD+VPGC K G MMLDEIINY
Sbjct: 117 KREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 176
Query: 196 VQSLQNQVEFLSMKLTA 212
VQSLQ Q+EFLSMKL+A
Sbjct: 177 VQSLQRQIEFLSMKLSA 193
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Query: 132 KEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDE 191
KE EK+ + +HVRARRGQATDSHS+AERVRR KI+ER++ LQD+VPGC K G MLDE
Sbjct: 162 KELEKT-DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDE 220
Query: 192 IINYVQSLQNQVEFLSMKLTAASTFYDFN 220
IINYVQSLQ Q+EFLSMKL + DF+
Sbjct: 221 IINYVQSLQRQIEFLSMKLAIVNPRPDFD 249
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 67/82 (81%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAERVRR +I+ER+R LQ++VPGC K G MLDEIINYVQS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 199 LQNQVEFLSMKLTAASTFYDFN 220
LQ QVEFLSMK+ A++ F+
Sbjct: 202 LQKQVEFLSMKIAASNPVVSFD 223
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 70/88 (79%), Gaps = 1/88 (1%)
Query: 125 KRVKGNEKEEEKSKE-VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTM 183
K+ K N + E K+ +HVRARRGQAT+SHSLAERVRR KI+ER+R LQ++VPGC K
Sbjct: 221 KQAKDNPQSGEAPKDDYIHVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKIT 280
Query: 184 GMTMMLDEIINYVQSLQNQVEFLSMKLT 211
G +MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 281 GKAVMLDEIINYVQSLQQQVEFLSMKLA 308
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 74/104 (71%), Gaps = 1/104 (0%)
Query: 118 KKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVP 177
KK +++ G + ++EK VHVRARRGQATDSHSLAER RR KIN R+ L+++VP
Sbjct: 169 KKGKTAEEKLAGGDGDDEKPA-YVHVRARRGQATDSHSLAERARREKINARMELLKELVP 227
Query: 178 GCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNS 221
GC K G ++LDEIIN+VQSLQ QVE+LSM+L A + DF
Sbjct: 228 GCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGG 271
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Query: 132 KEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDE 191
KE EK+ + +HVRARRGQATDSHS+AERVRR KI+ER++ LQD+VPGC K G MLDE
Sbjct: 162 KELEKT-DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDE 220
Query: 192 IINYVQSLQNQVEFLSMKLTAASTFYDFN 220
IINYVQSLQ Q+EFLSMKL + DF+
Sbjct: 221 IINYVQSLQRQIEFLSMKLAIVNPRPDFD 249
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 66/77 (85%)
Query: 136 KSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINY 195
K ++ VHVRA+RGQAT+SHSLAER RR KINER++ LQD+VPGC K G MMLDEIINY
Sbjct: 91 KREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 150
Query: 196 VQSLQNQVEFLSMKLTA 212
VQSLQ Q+EFLSMKL+A
Sbjct: 151 VQSLQRQIEFLSMKLSA 167
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 66/77 (85%)
Query: 136 KSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINY 195
K ++ VHVRA+RGQAT+SHSLAER RR KINER++ LQD+VPGC K G MMLDEIINY
Sbjct: 117 KREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 176
Query: 196 VQSLQNQVEFLSMKLTA 212
VQSLQ Q+EFLSMKL+A
Sbjct: 177 VQSLQRQIEFLSMKLSA 193
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 66/77 (85%)
Query: 136 KSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINY 195
K ++ VHVRA+RGQAT+SHSLAER RR KINER++ LQD+VPGC K G MMLDEIINY
Sbjct: 117 KREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 176
Query: 196 VQSLQNQVEFLSMKLTA 212
VQSLQ Q+EFLSMKL+A
Sbjct: 177 VQSLQRQIEFLSMKLSA 193
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 66/77 (85%)
Query: 136 KSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINY 195
K ++ VHVRA+RGQAT+SHSLAER RR KINER++ LQD+VPGC K G MMLDEIINY
Sbjct: 91 KREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 150
Query: 196 VQSLQNQVEFLSMKLTA 212
VQSLQ Q+EFLSMKL+A
Sbjct: 151 VQSLQRQIEFLSMKLSA 167
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 82/121 (67%), Gaps = 4/121 (3%)
Query: 92 NRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKE-VVHVRARRGQA 150
N+KAVE ED ++ K K + + K + + EE KE +H+RARRGQA
Sbjct: 157 NKKAVE---EFQEDPQRGNDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMRARRGQA 213
Query: 151 TDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKL 210
T+SHSLAERVRR KI+ER+R LQ++ PGC K G +MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 214 TNSHSLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKL 273
Query: 211 T 211
Sbjct: 274 A 274
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 62/72 (86%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+HVRARRGQATDSHSLAER RR KI+ER++ LQDIVPGC K +G +LDEIINY+QSLQ
Sbjct: 121 IHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQ 180
Query: 201 NQVEFLSMKLTA 212
QVEFLSMKL A
Sbjct: 181 RQVEFLSMKLEA 192
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 66/77 (85%)
Query: 136 KSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINY 195
K ++ VHVRA+RGQAT+SHSLAER RR KINER++ LQD+VPGC K G MMLDEIINY
Sbjct: 121 KREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 180
Query: 196 VQSLQNQVEFLSMKLTA 212
VQSLQ Q+EFLSMKL+A
Sbjct: 181 VQSLQRQIEFLSMKLSA 197
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 62/72 (86%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+HVRARRGQATDSHSLAER RR KI+++++CLQD+VPGC K G MLDEIINYVQSLQ
Sbjct: 35 IHVRARRGQATDSHSLAERARREKISKKMKCLQDLVPGCNKITGRAGMLDEIINYVQSLQ 94
Query: 201 NQVEFLSMKLTA 212
QVEF+SMKL A
Sbjct: 95 RQVEFISMKLAA 106
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 71/90 (78%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
E + + HVRAR+GQAT++HSLAER+RR KI+ER++ LQD+VPGC K G +MLDEII
Sbjct: 167 EAQKEGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEII 226
Query: 194 NYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
NYVQSLQ QVEFLSMKL+A + D + ES
Sbjct: 227 NYVQSLQRQVEFLSMKLSAVNPRIDLDIES 256
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 65/75 (86%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QSLQ
Sbjct: 149 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 208
Query: 201 NQVEFLSMKLTAAST 215
QVEFLSMKL A ++
Sbjct: 209 RQVEFLSMKLEAVNS 223
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 67/88 (76%)
Query: 133 EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEI 192
EE + VHVRARRGQATDSHSLAER RR KIN R++ LQ++VPGC K G ++LDEI
Sbjct: 194 EENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEI 253
Query: 193 INYVQSLQNQVEFLSMKLTAASTFYDFN 220
IN+VQSLQ QVE LSM+L A + DFN
Sbjct: 254 INHVQSLQRQVEMLSMRLAAVNPRIDFN 281
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 67/88 (76%)
Query: 133 EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEI 192
EE + VHVRARRGQATDSHSLAER RR KIN R++ LQ++VPGC K G ++LDEI
Sbjct: 194 EENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEI 253
Query: 193 INYVQSLQNQVEFLSMKLTAASTFYDFN 220
IN+VQSLQ QVE LSM+L A + DFN
Sbjct: 254 INHVQSLQRQVEMLSMRLAAVNPRIDFN 281
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 70/84 (83%), Gaps = 1/84 (1%)
Query: 130 NEKEEEKSKE-VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMM 188
N+K +E SK+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +M
Sbjct: 374 NQKAKEFSKQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVM 433
Query: 189 LDEIINYVQSLQNQVEFLSMKLTA 212
LDEIINYVQSLQ QVE LSMK+ +
Sbjct: 434 LDEIINYVQSLQRQVESLSMKVAS 457
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 68/86 (79%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAERVRR +I+ER+R LQ++VPGC K G MLDEIINYVQS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 199 LQNQVEFLSMKLTAASTFYDFNSESD 224
LQ QVEFLSMK+ A++ F+ D
Sbjct: 199 LQKQVEFLSMKIAASNPVVSFDIVED 224
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VHVR RRGQATDSHSLAER RR KIN R++ LQ++VPGC K G ++LD+IIN+VQSLQ
Sbjct: 186 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQ 245
Query: 201 NQVEFLSMKLTAASTFYDFNSES 223
N+VE LSMKL A + DFN +S
Sbjct: 246 NEVEILSMKLAAVNPVIDFNLDS 268
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 68/86 (79%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAERVRR +I+ER+R LQ++VPGC K G MLDEIINYVQS
Sbjct: 149 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 208
Query: 199 LQNQVEFLSMKLTAASTFYDFNSESD 224
LQ QVEFLSMK+ A++ F+ D
Sbjct: 209 LQKQVEFLSMKIAASNPVVSFDIVED 234
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 65/75 (86%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QSLQ
Sbjct: 149 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 208
Query: 201 NQVEFLSMKLTAAST 215
QVEFLSMKL A ++
Sbjct: 209 RQVEFLSMKLEAVNS 223
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 68/86 (79%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAERVRR +I+ER+R LQ++VPGC K G MLDEIINYVQS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 199 LQNQVEFLSMKLTAASTFYDFNSESD 224
LQ QVEFLSMK+ A++ F+ D
Sbjct: 199 LQKQVEFLSMKIAASNPVVSFDIVED 224
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VHVR RRGQATDSHSLAER RR KIN R++ LQ++VPGC K G ++LD+IIN+VQSLQ
Sbjct: 190 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQ 249
Query: 201 NQVEFLSMKLTAASTFYDFNSES 223
N+VE LSMKL A + DFN +S
Sbjct: 250 NEVEILSMKLAAVNPVIDFNLDS 272
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 68/86 (79%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAERVRR +I+ER+R LQ++VPGC K G MLDEIINYVQS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 199 LQNQVEFLSMKLTAASTFYDFNSESD 224
LQ QVEFLSMK+ A++ F+ D
Sbjct: 199 LQKQVEFLSMKIAASNPVVSFDIVED 224
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Query: 99 SESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAE 158
SES N D S E ET+ + K + E K+ +HVRARRGQATD HSLAE
Sbjct: 113 SESGNGDGSMRPEGETSSGGGGGSKATEQK---NKPEPPKDYIHVRARRGQATDRHSLAE 169
Query: 159 RVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKL 210
R RR KI+E++ LQDI+PGC K +G ++LDEIINY+QSLQ QVEFLSMKL
Sbjct: 170 RARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKL 221
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 108/203 (53%), Gaps = 30/203 (14%)
Query: 38 NTSLLNYQSF-MPFSNPDNFFEFPGNLAENFPGNFIQNNMLPVCHTVTSTKCESKNRKAV 96
N+ +Q++ M + + + P G F QN L H+ +K RK +
Sbjct: 36 NSGAFGFQAYPMVLEDREGLYRSPN-------GTFCQNIQLSDDHS-----SGAKRRKGI 83
Query: 97 E----------------ISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKE- 139
+ + + E SS I + + S + + K + + + +KE
Sbjct: 84 DDHIALLNPSASSRIQNVGDQQTEVSSQQERISMEEDNQKSCSKMQSKEDSSDGDGTKED 143
Query: 140 VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSL 199
VHVRA+RGQAT+SHSLAER+RR KI+ER++ LQD+VPGC K G +MLDEIINYVQSL
Sbjct: 144 YVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSL 203
Query: 200 QNQVEFLSMKLTAASTFYDFNSE 222
Q QVEFLSMKL + F+ E
Sbjct: 204 QRQVEFLSMKLATVNPELSFDIE 226
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Query: 125 KRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMG 184
+++ G + ++EK VHVRARRGQATDSHSLAER RR KIN R+ L+++VPGC K G
Sbjct: 163 EKLAGGDGDDEKPA-YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSG 221
Query: 185 MTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNS 221
++LDEIIN+VQSLQ QVE+LSM+L A + DF
Sbjct: 222 TALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGG 258
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 67/88 (76%)
Query: 133 EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEI 192
EE + VHVRARRGQATDSHSLAER RR KIN R++ LQ++VPGC K G ++LDEI
Sbjct: 190 EETEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEI 249
Query: 193 INYVQSLQNQVEFLSMKLTAASTFYDFN 220
IN+VQSLQ QVE LSM+L A + DFN
Sbjct: 250 INHVQSLQRQVEMLSMRLAAVNPRIDFN 277
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 66/82 (80%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRG+ATD HSLAER RR KI+++++CLQDIVPGC K G MLDEIINYVQS
Sbjct: 137 DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINYVQS 196
Query: 199 LQNQVEFLSMKLTAASTFYDFN 220
LQ QVEFLSMKL+ + +F+
Sbjct: 197 LQQQVEFLSMKLSVLNPELEFH 218
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 86/127 (67%), Gaps = 8/127 (6%)
Query: 86 TKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRA 145
T E+K KA S +++SS +E ET+ R + + + E ++ +HVRA
Sbjct: 85 TDSEAKRFKA-----SKSDNSSLRTEAETDSRNAS---KSGDQNPPPPEPPKQDYIHVRA 136
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G +LDEIINY+Q+LQ QVEF
Sbjct: 137 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEF 196
Query: 206 LSMKLTA 212
LSMKL A
Sbjct: 197 LSMKLEA 203
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 94/148 (63%), Gaps = 25/148 (16%)
Query: 87 KCESKNRKAVE------ISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEV 140
+C+ +N ++V+ SE+S + SP + ++N R K + ++
Sbjct: 6 RCKGENDESVKAKAERSCSENSGDSGSPRALKDSNNRNKILSK--------------QDY 51
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ
Sbjct: 52 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 111
Query: 201 NQVEFLSMKLTA-----ASTFYDFNSES 223
QVE LSMKL + ++ D+N E+
Sbjct: 112 RQVESLSMKLASVNPGPSTARLDYNFET 139
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 94/143 (65%), Gaps = 13/143 (9%)
Query: 91 KNRKAVE-----ISESSNEDSSPVSEIETNKRKKNSGRRK-----RVKGNEKEEEKSKE- 139
K RK VE + + ++ + S+ E N ++ G RK + K + + + +KE
Sbjct: 77 KKRKGVEDCVTLLPNAGDQQTEGSSQPERNSMEE--GNRKISPKIQSKEDSSDGDGTKED 134
Query: 140 VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSL 199
VH+RA+RGQAT+SHSLAER+RR KI+ER++ LQD+VPGC K G +MLDEIINYVQSL
Sbjct: 135 YVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSL 194
Query: 200 QNQVEFLSMKLTAASTFYDFNSE 222
Q QVEFLSMKL+ + F+ E
Sbjct: 195 QRQVEFLSMKLSTVNPELGFDIE 217
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 63/79 (79%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VP C K G +MLDEIINYVQSLQ
Sbjct: 23 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINYVQSLQ 82
Query: 201 NQVEFLSMKLTAASTFYDF 219
Q+EFLSMKL A D
Sbjct: 83 RQIEFLSMKLAAVDPRLDI 101
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 77/112 (68%), Gaps = 4/112 (3%)
Query: 99 SESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAE 158
SES N D S E ET+ S + + + E K+ +HVRARRGQATD HSLAE
Sbjct: 113 SESGNGDGSMRPEGETSSGGGGS----KATEQKNKPEPPKDYIHVRARRGQATDRHSLAE 168
Query: 159 RVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKL 210
R RR KI+E++ LQDI+PGC K +G ++LDEIINY+QSLQ QVEFLSMKL
Sbjct: 169 RARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKL 220
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 62/72 (86%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAER RR KI+ER++ LQDIVPGC K +G +LDEIINY+QS
Sbjct: 46 DYIHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQS 105
Query: 199 LQNQVEFLSMKL 210
LQ QVEFLSMKL
Sbjct: 106 LQRQVEFLSMKL 117
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 63/75 (84%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAER RR KI+ER++ LQDIVPGC K G ++LDEIINY+QS
Sbjct: 137 DYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQS 196
Query: 199 LQNQVEFLSMKLTAA 213
LQ QVEFLSMKL A
Sbjct: 197 LQRQVEFLSMKLEAV 211
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 64/75 (85%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+HVRARRGQATDSH LAER RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QSLQ
Sbjct: 149 IHVRARRGQATDSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 208
Query: 201 NQVEFLSMKLTAAST 215
QVEFLSMKL A ++
Sbjct: 209 RQVEFLSMKLEAVNS 223
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 69/85 (81%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
++ VH+RA+RGQAT+SHSLAER+RR KI+ER++ LQD+VPGC K G +MLDEIINYVQ
Sbjct: 26 EDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 85
Query: 198 SLQNQVEFLSMKLTAASTFYDFNSE 222
SLQ QVEFLSMKL+ + F+ E
Sbjct: 86 SLQRQVEFLSMKLSTVNPELGFDIE 110
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 68/85 (80%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
++ VHVRA+RGQAT+SHSLAER+RR KI+ER++ LQD+VPGC K G +MLDEIINYVQ
Sbjct: 133 EDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQ 192
Query: 198 SLQNQVEFLSMKLTAASTFYDFNSE 222
SLQ QVEFLSMKL + F+ E
Sbjct: 193 SLQRQVEFLSMKLATVNPELGFDIE 217
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 81/139 (58%), Gaps = 13/139 (9%)
Query: 80 CHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNK--------RKKNSGRRKRVKGNE 131
C ++ SK KA E ++ +S +E K RK +G R G
Sbjct: 180 CRKRKASGTSSKQSKAKEAVTTAPPESRETAETRAKKCKLSTDEERKPAAGEGWRGSGKG 239
Query: 132 KE-----EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMT 186
KE E K+ +HVRARRGQATDSHSLAERVRR KI ER++ LQD+VPGC K G
Sbjct: 240 KELVAADAEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKA 299
Query: 187 MMLDEIINYVQSLQNQVEF 205
+MLDEIINYVQSLQ QVE
Sbjct: 300 VMLDEIINYVQSLQRQVEV 318
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Query: 120 NSGRRKRVKGNEKEEEKSK-EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
S ++++ +E + K VHVR RRGQATDSHSLAER RR KIN R++ LQ++VPG
Sbjct: 176 GSSKKRKSAADETSGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPG 235
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
C K G M+LDEIIN+VQSLQ QVE LSMKL A + DF+ +S
Sbjct: 236 CDKISGTAMVLDEIINHVQSLQRQVEILSMKLAAVNPRIDFSLDS 280
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 68/85 (80%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
++ VH+RA+RGQAT+SHSLAER+RR KI+ER++ LQD+VPGC K G +MLDEIINYVQ
Sbjct: 141 EDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 200
Query: 198 SLQNQVEFLSMKLTAASTFYDFNSE 222
SLQ QVEFLSMKL + F+ E
Sbjct: 201 SLQRQVEFLSMKLATVNPELGFDIE 225
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 68/85 (80%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
++ VH+RA+RGQAT+SHSLAER+RR KI+ER++ LQD+VPGC K G +MLDEIINYVQ
Sbjct: 135 EDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 194
Query: 198 SLQNQVEFLSMKLTAASTFYDFNSE 222
SLQ QVEFLSMKL + F+ E
Sbjct: 195 SLQRQVEFLSMKLATVNPELGFDIE 219
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 90/141 (63%), Gaps = 9/141 (6%)
Query: 91 KNRKAVEISESSNEDSSPVSEIETNKRKKNS---GRRKRVKGNEKEEEKS------KEVV 141
K RK VE + D+ + + ++NS G RK + +E+ S ++ V
Sbjct: 45 KKRKGVEDCVTLLHDAGDQQTKGSPQPERNSVEEGNRKISPKMQSKEDSSDGDGTKEDYV 104
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
H+RA+RGQAT+SHSLAER+RR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ
Sbjct: 105 HIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQR 164
Query: 202 QVEFLSMKLTAASTFYDFNSE 222
QVEFLSMKL + F+ E
Sbjct: 165 QVEFLSMKLATVNPELGFDIE 185
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 66/83 (79%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VHVR RRGQATDSHSLAER RR KIN R++ LQ++VPGC K G ++LD+IIN+VQSLQ
Sbjct: 158 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQ 217
Query: 201 NQVEFLSMKLTAASTFYDFNSES 223
++VE LSMKL A + DFN +S
Sbjct: 218 HEVEILSMKLAAVNPIIDFNLDS 240
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 70/95 (73%), Gaps = 5/95 (5%)
Query: 126 RVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM 185
+V G+ K + +HVRARRGQATDSHSLAER RR KI+++++ LQD+VPGC K G
Sbjct: 178 KVSGSPK-----PDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGK 232
Query: 186 TMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
MLDEIINYVQSLQ QVEFLS+KL + DFN
Sbjct: 233 AGMLDEIINYVQSLQRQVEFLSLKLATMNPRTDFN 267
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 65/83 (78%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VHVR RRGQATDSHSLAER RR KIN R++ LQ++VPGC K G M+LDEIIN+VQSLQ
Sbjct: 204 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQ 263
Query: 201 NQVEFLSMKLTAASTFYDFNSES 223
QVE LSMKL A + DF+ +S
Sbjct: 264 RQVEILSMKLAAVNPRIDFSLDS 286
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
E ++ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G +LDEII
Sbjct: 50 EAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEII 109
Query: 194 NYVQSLQNQVEFLSMKLTAAST 215
NY+Q+LQ QVEFLSMKL A ++
Sbjct: 110 NYIQALQRQVEFLSMKLEAVNS 131
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 62/74 (83%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRG+ATD HSLAER RR KI+++++CLQDIVPGC K G MLDEIINYVQS
Sbjct: 133 DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQS 192
Query: 199 LQNQVEFLSMKLTA 212
LQ QVEFLSMKL+
Sbjct: 193 LQQQVEFLSMKLSV 206
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 70/95 (73%), Gaps = 5/95 (5%)
Query: 126 RVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM 185
+V G+ K + +HVRARRGQATDSHSLAER RR KI+++++ LQD+VPGC K G
Sbjct: 178 KVSGSPK-----PDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGK 232
Query: 186 TMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
MLDEIINYVQSLQ QVEFLS+KL + DFN
Sbjct: 233 AGMLDEIINYVQSLQRQVEFLSLKLATMNPRTDFN 267
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
Query: 104 EDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKE-VVHVRARRGQATDSHSLAERVRR 162
E S + TN + + K V N E K+ +HVRARRGQATDSHS+AER RR
Sbjct: 72 ESDSADGNLRTNAQTDSGNASKVVDRNPTPPEPPKQDYIHVRARRGQATDSHSIAERARR 131
Query: 163 GKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTA 212
KI+ER++ LQD+VPGC K +G +LDEIINY+Q+LQ QVEFLSMKL A
Sbjct: 132 EKISERMKMLQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEA 181
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 62/74 (83%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRG+ATD HSLAER RR KI+++++CLQDIVPGC K G MLDEIINYVQS
Sbjct: 137 DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQS 196
Query: 199 LQNQVEFLSMKLTA 212
LQ QVEFLSMKL+
Sbjct: 197 LQQQVEFLSMKLSV 210
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 72/106 (67%)
Query: 116 KRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDI 175
KRK + + K E++ VHVRARRGQATDSHSLAER RR KIN R+ L+++
Sbjct: 53 KRKADHAADRASKDAGGGEDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKEL 112
Query: 176 VPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNS 221
VPGC K G ++LDEIIN+VQSLQ QVE+LSM+L A + DF
Sbjct: 113 VPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGG 158
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 62/74 (83%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRG+ATD HSLAER RR KI+++++CLQDIVPGC K G MLDEIINYVQS
Sbjct: 121 DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQS 180
Query: 199 LQNQVEFLSMKLTA 212
LQ QVEFLSMKL+
Sbjct: 181 LQQQVEFLSMKLSV 194
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 62/74 (83%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRG+ATD HSLAER RR KI+++++CLQDIVPGC K G MLDEIINYVQS
Sbjct: 137 DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQS 196
Query: 199 LQNQVEFLSMKLTA 212
LQ QVEFLSMKL+
Sbjct: 197 LQQQVEFLSMKLSV 210
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 62/74 (83%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRG+ATD HSLAER RR KI+++++CLQDIVPGC K G MLDEIINYVQS
Sbjct: 121 DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQS 180
Query: 199 LQNQVEFLSMKLTA 212
LQ QVEFLSMKL+
Sbjct: 181 LQQQVEFLSMKLSV 194
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 62/74 (83%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRG+ATD HSLAER RR KI+++++CLQDIVPGC K G MLDEIINYVQS
Sbjct: 137 DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQS 196
Query: 199 LQNQVEFLSMKLTA 212
LQ QVEFLSMKL+
Sbjct: 197 LQQQVEFLSMKLSV 210
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 63/75 (84%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
++ +HVRARRGQATDSHSLAER RR KI ER++ LQD+VPGC K +G +LDEIINYVQ
Sbjct: 109 QDYIHVRARRGQATDSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQ 168
Query: 198 SLQNQVEFLSMKLTA 212
+L+ QVEFLSMKL A
Sbjct: 169 ALERQVEFLSMKLEA 183
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 62/74 (83%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRG+ATD HSLAER RR KI+++++CLQDIVPGC K G MLDEIINYVQS
Sbjct: 137 DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQS 196
Query: 199 LQNQVEFLSMKLTA 212
LQ QVEFLSMKL+
Sbjct: 197 LQQQVEFLSMKLSV 210
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 62/74 (83%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRG+ATD HSLAER RR KI+++++CLQDIVPGC K G MLDEIINYVQS
Sbjct: 137 DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQS 196
Query: 199 LQNQVEFLSMKLTA 212
LQ QVEFLSMKL+
Sbjct: 197 LQQQVEFLSMKLSV 210
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
E+ +HVRARRGQATDSHSLAERVRR KI++R+ LQ +VPGC K G ++LDEII
Sbjct: 129 EDPPTGYIHVRARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALVLDEII 188
Query: 194 NYVQSLQNQVEFLSMKLTAASTFYDFNSESD 224
NYVQSLQNQVEFLSMKL + + + F+S D
Sbjct: 189 NYVQSLQNQVEFLSMKLASVNPMF-FDSAMD 218
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 65/80 (81%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+HVRARRGQATDSHSLAER RR KI+++++ LQD+VPGC K G MLDEIINYVQSLQ
Sbjct: 200 IHVRARRGQATDSHSLAERARREKISKKMKSLQDLVPGCNKITGRAGMLDEIINYVQSLQ 259
Query: 201 NQVEFLSMKLTAASTFYDFN 220
QVEFLSMKL A + +FN
Sbjct: 260 RQVEFLSMKLAALNPRPEFN 279
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 63/80 (78%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VHVR RRGQATDSHSLAER RR KIN R++ LQ++VPGC K G ++LDEIIN+VQ+LQ
Sbjct: 171 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQ 230
Query: 201 NQVEFLSMKLTAASTFYDFN 220
QVE LSMKL A + DFN
Sbjct: 231 RQVEILSMKLAAVNPRIDFN 250
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 66/82 (80%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VH+RA+RGQAT+SHSLAER+RR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ
Sbjct: 136 VHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQ 195
Query: 201 NQVEFLSMKLTAASTFYDFNSE 222
QVEFLSMKL + F+ E
Sbjct: 196 RQVEFLSMKLATVNPELGFDIE 217
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 64/77 (83%)
Query: 136 KSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINY 195
K ++ HVRA+RGQAT+SHSLAER RR KIN R++ LQD+VPGC K G MMLDEIINY
Sbjct: 147 KREDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINY 206
Query: 196 VQSLQNQVEFLSMKLTA 212
VQSLQ QVEFLSMKL+A
Sbjct: 207 VQSLQRQVEFLSMKLSA 223
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 74/95 (77%), Gaps = 3/95 (3%)
Query: 127 VKGNEKEEEKSKE-VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM 185
VK + + E KE +HVRA+RGQAT+SHSLAERVRR +I+ER++ LQD+VPGC K G
Sbjct: 229 VKMSSQTGEAPKEDYIHVRAKRGQATNSHSLAERVRRERISERMKFLQDLVPGCNKITGK 288
Query: 186 TMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
+MLDEIINYVQSLQ QVEFLSMKL A+ + + N
Sbjct: 289 AVMLDEIINYVQSLQRQVEFLSMKL--ATVYPEMN 321
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
Query: 130 NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
N K EK + +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G ML
Sbjct: 117 NSKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGML 175
Query: 190 DEIINYVQSLQNQVEFLS 207
DEIINYVQSLQ QVEFLS
Sbjct: 176 DEIINYVQSLQRQVEFLS 193
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 64/77 (83%)
Query: 136 KSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINY 195
K ++ HVRA+RGQAT+SHSLAER RR KIN R++ LQD+VPGC K G MMLDEIINY
Sbjct: 147 KREDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINY 206
Query: 196 VQSLQNQVEFLSMKLTA 212
VQSLQ QVEFLSMKL+A
Sbjct: 207 VQSLQRQVEFLSMKLSA 223
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 66/83 (79%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VHVRARRGQATD+HSLAER RR KIN R++ LQ++VPGC K G ++LDEIIN+VQ+LQ
Sbjct: 183 VHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQ 242
Query: 201 NQVEFLSMKLTAASTFYDFNSES 223
QVE LSM+L A + DFN +S
Sbjct: 243 RQVEMLSMRLAAVNPRIDFNLDS 265
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 65/81 (80%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VHVRARRGQATDSHSLAER RR KIN R++ LQ++VPGC K G ++LDEIIN+VQSLQ
Sbjct: 5 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSLQ 64
Query: 201 NQVEFLSMKLTAASTFYDFNS 221
+VEFLSM+L A + DF+
Sbjct: 65 REVEFLSMRLAAVNPRIDFSG 85
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 66/83 (79%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VHVRARRGQATD+HSLAER RR KIN R++ LQ++VPGC K G ++LDEIIN+VQ+LQ
Sbjct: 183 VHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINHVQTLQ 242
Query: 201 NQVEFLSMKLTAASTFYDFNSES 223
QVE LSM+L A + DFN +S
Sbjct: 243 RQVEMLSMRLAAVNPRIDFNLDS 265
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 80/127 (62%), Gaps = 7/127 (5%)
Query: 111 EIETN-KRKKNSGRRKRVKGNEKE------EEKSKEVVHVRARRGQATDSHSLAERVRRG 163
E E+N K K N G + KE E + + +HVRARRGQATD HSLAER RR
Sbjct: 148 ETESNMKGKSNMGNTEASSDTSKEISKGASESQKLDYIHVRARRGQATDRHSLAERARRE 207
Query: 164 KINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
KI+++++ LQD+VPGC K G MLDEIINYVQSLQ QVEFLSMKL + + E
Sbjct: 208 KISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFLSMKLAVLNPELELAVED 267
Query: 224 DAVETMQ 230
+V+ Q
Sbjct: 268 LSVKQFQ 274
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 68/88 (77%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ VHVRARRG+ATDSHSLAER RR KI+ER++ LQ++VPGC K G MLDEIINYVQS
Sbjct: 2 DYVHVRARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQS 61
Query: 199 LQNQVEFLSMKLTAASTFYDFNSESDAV 226
LQ QVEFLSMK+ A + DF + D +
Sbjct: 62 LQQQVEFLSMKVAALNHRVDFINVDDLL 89
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 66/83 (79%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VHVRARRGQATD+HSLAER RR KIN R++ LQ++VPGC K G ++LDEIIN+VQSLQ
Sbjct: 182 VHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQ 241
Query: 201 NQVEFLSMKLTAASTFYDFNSES 223
QVE LSM+L A + +FN +S
Sbjct: 242 RQVEMLSMRLAAVNPRVEFNLDS 264
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 77/114 (67%), Gaps = 8/114 (7%)
Query: 109 VSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINER 168
V+ ++ + +++ G VK E +HVRA+RGQA DSHSLAERVRR KI+E+
Sbjct: 129 VASVKEKRPREHGGADVDVK------EAPAGYIHVRAKRGQARDSHSLAERVRREKISEK 182
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS--TFYDFN 220
+ LQ +VPGC K G MMLDEII+YVQSLQNQVEFLSMKL + + Y+F
Sbjct: 183 MLLLQSLVPGCDKVTGKAMMLDEIISYVQSLQNQVEFLSMKLASLNPMMMYEFG 236
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 62/73 (84%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+HVRARRGQATDSHSLAERVRR KI+ER+ LQ +VPGC K G ++L+EIINYVQSLQ
Sbjct: 117 IHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQ 176
Query: 201 NQVEFLSMKLTAA 213
+QVEFLSMKL +
Sbjct: 177 HQVEFLSMKLASV 189
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
Query: 125 KRVKGNEKEEEKSKE-VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTM 183
K+ KG + + KE +HV+ARRG+A ++HSLAERVRR KI+ER++ LQ +VPGC++
Sbjct: 186 KKAKGGSQNVQAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQIT 245
Query: 184 GMTMMLDEIINYVQSLQNQVEFLSMKLTAA 213
G T++LDEIINYVQSLQ QVEFLSMKL +
Sbjct: 246 GKTVVLDEIINYVQSLQQQVEFLSMKLASV 275
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 66/84 (78%)
Query: 128 KGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTM 187
KG E + + VHVRAR QAT+SHS+AE++RR KI+ER++ LQD+VPGC K G +
Sbjct: 133 KGKGAGERQKEGYVHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAV 192
Query: 188 MLDEIINYVQSLQNQVEFLSMKLT 211
MLDEIINYVQSLQ QVEFLSMKL+
Sbjct: 193 MLDEIINYVQSLQRQVEFLSMKLS 216
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 63/81 (77%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VHVRARRGQATDSHSLAER RR KIN R+ L+++VPGC K G ++LDEIIN+VQSLQ
Sbjct: 144 VHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQ 203
Query: 201 NQVEFLSMKLTAASTFYDFNS 221
QVE+LSM+L A + DF
Sbjct: 204 RQVEYLSMRLAAVNPRVDFGG 224
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 63/81 (77%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VHVRARRGQATDSHSLAER RR KIN R+ L+++VPGC K G ++LDEIIN+VQSLQ
Sbjct: 105 VHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQ 164
Query: 201 NQVEFLSMKLTAASTFYDFNS 221
QVE+LSM+L A + DF
Sbjct: 165 RQVEYLSMRLAAVNPRVDFGG 185
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 125 KRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMG 184
K+VK +KE+ + +HVRARRGQATD HSLAER RR KI+ R++ LQ +VPGC + G
Sbjct: 134 KKVK--KKEQPPKQGFIHVRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVTG 191
Query: 185 MTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
+ML+EIINYV+SLQ Q+EFLSMKL A D N E
Sbjct: 192 KAVMLEEIINYVKSLQRQIEFLSMKLAAVDPRVDTNVEG 230
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 91/152 (59%), Gaps = 17/152 (11%)
Query: 86 TKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEE--EKSKEV--- 140
T+ E K K +++ +E E++ + K++ R + +E +K+ E+
Sbjct: 131 TRGEEKTEKKIKVE----------AETESSMKGKSNMRNTEASSDTSKETSKKASEIQKL 180
Query: 141 --VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+HVRARRGQATD HSLAER RR KI+++++ LQDIVPGC K G MLDEIINYVQ
Sbjct: 181 DYIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQC 240
Query: 199 LQNQVEFLSMKLTAASTFYDFNSESDAVETMQ 230
LQ QVEFLSMKL + + E +V+ Q
Sbjct: 241 LQRQVEFLSMKLAVLNPELELAVEDVSVKQFQ 272
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 70/102 (68%), Gaps = 5/102 (4%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
E + + +HVRARRGQATD HSLAER RR KI+++++ LQDIVPGC K G MLDEII
Sbjct: 176 ENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEII 235
Query: 194 NYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETMQKAKAY 235
NYVQ LQ QVEFLSMKL + + AVE + +AY
Sbjct: 236 NYVQCLQRQVEFLSMKLAVLNPELEL-----AVEDVSVKQAY 272
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 86/151 (56%), Gaps = 15/151 (9%)
Query: 86 TKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSK------E 139
T+ E K K +++ E+ E S K K N G + KE K +
Sbjct: 131 TREEQKTEKKIKV-EAETESSM--------KGKSNMGNTEASSDTSKETSKGASENQKLD 181
Query: 140 VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSL 199
+HVRARRGQATD HSLAER RR KI+++++ LQDIVPGC K G MLDEIINYVQ L
Sbjct: 182 YIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCL 241
Query: 200 QNQVEFLSMKLTAASTFYDFNSESDAVETMQ 230
Q QVEFLSMKL + + E +V+ Q
Sbjct: 242 QRQVEFLSMKLAVLNPELELAVEDVSVKQFQ 272
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 68/97 (70%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
E + + +HVRARRGQATD HSLAER RR KI+++++ LQDIVPGC K G MLDEII
Sbjct: 159 ENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEII 218
Query: 194 NYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETMQ 230
NYVQ LQ QVEFLSMKL + + E +V+ Q
Sbjct: 219 NYVQCLQRQVEFLSMKLAVLNPELELAVEDVSVKQFQ 255
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 68/97 (70%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
E + + +HVRARRGQATD HSLAER RR KI+++++ LQDIVPGC K G MLDEII
Sbjct: 176 ENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEII 235
Query: 194 NYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETMQ 230
NYVQ LQ QVEFLSMKL + + E +V+ Q
Sbjct: 236 NYVQCLQRQVEFLSMKLAVLNPELELAVEDVSVKQFQ 272
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 63/74 (85%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VHVRARRG+ATDSHSLAER RR KI+ER++ LQ +VPGC K +G T++LDEIINYV+SLQ
Sbjct: 106 VHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYVKSLQ 165
Query: 201 NQVEFLSMKLTAAS 214
NQVEFL KL + S
Sbjct: 166 NQVEFLVGKLASIS 179
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 63/74 (85%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VHVRARRG+ATDSHSLAER RR KI+ER++ LQ +VPGC K +G T++LDEIINYV+SLQ
Sbjct: 106 VHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYVKSLQ 165
Query: 201 NQVEFLSMKLTAAS 214
NQVEFL KL + S
Sbjct: 166 NQVEFLVGKLASIS 179
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 72/103 (69%), Gaps = 16/103 (15%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERV----------------RRGKINERLRCLQDIVP 177
E ++ +HVRARRGQATDSHS+AERV RR KI+ER++ LQD+VP
Sbjct: 115 EPPKQDYIHVRARRGQATDSHSIAERVIHFSLCLSISYLLLVARREKISERMKILQDLVP 174
Query: 178 GCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
GC K +G ++LDEIINY+QSLQ+QVEFLSMKL A ++ + N
Sbjct: 175 GCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLN 217
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 65/88 (73%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
E++ VHVRARRGQATDSHSLAER RR KIN R+ L+++VPGC K G ++LDEII
Sbjct: 148 EDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEII 207
Query: 194 NYVQSLQNQVEFLSMKLTAASTFYDFNS 221
N+VQSLQ QVE+LSM+L + DF
Sbjct: 208 NHVQSLQRQVEYLSMRLATVNPRGDFGG 235
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 68/94 (72%), Gaps = 12/94 (12%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
E ++ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G +LDEII
Sbjct: 119 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEII 178
Query: 194 NYVQSLQNQVE------------FLSMKLTAAST 215
NY+QSLQ+QVE FLSMKL A ++
Sbjct: 179 NYIQSLQHQVEFMFKYLIELFLQFLSMKLEAVNS 212
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 63/74 (85%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VHVRARRG+ATDSHSLAER RR KI+ER++ LQ +VPGC K +G T++LDEIINYV+SLQ
Sbjct: 106 VHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQ 165
Query: 201 NQVEFLSMKLTAAS 214
NQVEFL KL + S
Sbjct: 166 NQVEFLVGKLASIS 179
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 63/74 (85%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VHVRARRG+ATDSHSLAER RR KI+ER++ LQ +VPGC K +G T++LDEIINYV+SLQ
Sbjct: 40 VHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQ 99
Query: 201 NQVEFLSMKLTAAS 214
NQVEFL KL + S
Sbjct: 100 NQVEFLVGKLASIS 113
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 125 KRVKGNEKEEEKSKE-VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTM 183
K+ KG + + KE +HV+ARRG+A ++HSLAERVRR KI+ER++ LQ +VPGC++
Sbjct: 186 KKAKGGSQNVQAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQIT 245
Query: 184 GMTMMLDEIINYVQSLQNQVEFLSMKLTAA 213
G T++LDEIINYVQSLQ QVE LSMKL +
Sbjct: 246 GKTVVLDEIINYVQSLQQQVELLSMKLASV 275
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 2/101 (1%)
Query: 123 RRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKT 182
R K+VK KE+ + +HVRARRGQAT+SHSLAER RR KI+ R++ LQ +VPGC +
Sbjct: 1 RGKKVK--NKEQPPKQGFIHVRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEV 58
Query: 183 MGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
G +ML+EIINYV+SLQ Q+EFLSMKL A D N E
Sbjct: 59 TGKAVMLEEIINYVKSLQRQIEFLSMKLAAVDPRLDTNVEG 99
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 72/91 (79%)
Query: 130 NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
+E + + K+ +H+R+RRGQAT+SHSLAERVRR KI+ER++ LQD+VPGC K G ++L
Sbjct: 99 DEPKNKSQKDYIHLRSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVL 158
Query: 190 DEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
+ IINYVQSLQ+QVE LS+KLT+ + F+
Sbjct: 159 ENIINYVQSLQSQVEILSVKLTSVLSRCHFD 189
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTM--GMTMMLDEIINYVQS 198
VHVRARRGQATDSHSLAER RR KIN R++ LQ++VPGC K G ++LD+IIN+VQS
Sbjct: 30 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQISGTALVLDKIINHVQS 89
Query: 199 LQNQVEFLSMKLTAASTFYDFNS 221
LQ QVEFLSM+L A + DF+
Sbjct: 90 LQRQVEFLSMRLAAVTPRIDFSG 112
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 8/91 (8%)
Query: 141 VHVRARRGQATDSHSLAERV--------RRGKINERLRCLQDIVPGCYKTMGMTMMLDEI 192
VHVRARRGQATD+HSLAERV RR KIN R++ LQ++VPGC K G ++LDEI
Sbjct: 127 VHVRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGTALVLDEI 186
Query: 193 INYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
IN+VQ+LQ QVE LSM+L A + DFN +S
Sbjct: 187 INHVQTLQRQVEMLSMRLAAVNPRIDFNLDS 217
>gi|147821091|emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
Length = 328
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 106/219 (48%), Gaps = 53/219 (24%)
Query: 79 VCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSK 138
+ T + + + N K ++IS + +E+ +E+E + + K + ++ E+ +
Sbjct: 97 IVSTSSGSGMNASNGKRMKISRTPDENGGSKAELEAS----SVAGEKPAEESKPAEQSKQ 152
Query: 139 EVVHVRARRGQATDSHSLAERV-------------------------------------- 160
+ +HVRARRGQATDSHSLAERV
Sbjct: 153 DYIHVRARRGQATDSHSLAERVMQFYTLLIFCFLVVPQMPKLKRIGLSWNSRSRCRCIGV 212
Query: 161 ------RRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS 214
RR KI+ER++ LQD+VPGC K +G ++LDEIINY+QSLQ QVEFLSMKL A +
Sbjct: 213 SVYINARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 272
Query: 215 -----TFYDFNSESDAVETMQKAKAYKAKEMERLMKEGN 248
T F + V+T A + R +G+
Sbjct: 273 SRMNHTVEGFPLKDLGVQTFDAAAMIYGSQATREYAQGS 311
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 69/94 (73%), Gaps = 4/94 (4%)
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAERVRR +I+ER+R LQ++VPGC K G MLDEIINYVQS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 199 LQNQVEF----LSMKLTAASTFYDFNSESDAVET 228
LQ QVE + + + + F F+++ +VE+
Sbjct: 202 LQKQVEVNGTAAAWDIGSQNLFSGFDAQFQSVES 235
>gi|108864345|gb|ABA93365.2| expressed protein [Oryza sativa Japonica Group]
Length = 508
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 56/168 (33%)
Query: 101 SSNEDSSPVSEIETNKRKKNSGRRKRVKGN--EKEEEKSKEVVHVRARRGQATDSHSLAE 158
+ +ED+ PV+ ++G KG + E K+ +HVRARRGQATDSHSLAE
Sbjct: 242 AGDEDTKPVA--------GDAGHGGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAE 293
Query: 159 RV--------------------------------RRGKINERLRCLQDIVPGCYKTM--- 183
RV RR KI+ER++ LQD+VPGC K
Sbjct: 294 RVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKISERMKLLQDLVPGCNKVAKFS 353
Query: 184 -----------GMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
G +MLDEIINYVQSLQ QVEFLSMKL+ + DF+
Sbjct: 354 QKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFD 401
>gi|62701739|gb|AAX92812.1| expressed protein [Oryza sativa Japonica Group]
Length = 507
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 56/168 (33%)
Query: 101 SSNEDSSPVSEIETNKRKKNSGRRKRVKGN--EKEEEKSKEVVHVRARRGQATDSHSLAE 158
+ +ED+ PV+ ++G KG + E K+ +HVRARRGQATDSHSLAE
Sbjct: 242 AGDEDTKPVA--------GDAGHGGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAE 293
Query: 159 RV--------------------------------RRGKINERLRCLQDIVPGCYKTM--- 183
RV RR KI+ER++ LQD+VPGC K
Sbjct: 294 RVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKISERMKLLQDLVPGCNKVAKFS 353
Query: 184 -----------GMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
G +MLDEIINYVQSLQ QVEFLSMKL+ + DF+
Sbjct: 354 QKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFD 401
>gi|125526612|gb|EAY74726.1| hypothetical protein OsI_02617 [Oryza sativa Indica Group]
Length = 386
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 56/168 (33%)
Query: 101 SSNEDSSPVSEIETNKRKKNSGRRKRVKGN--EKEEEKSKEVVHVRARRGQATDSHSLAE 158
+ +ED+ PV+ ++G KG + E K+ +HVRARRGQATDSHSLAE
Sbjct: 121 AGDEDTKPVA--------GDAGHGGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAE 172
Query: 159 RV--------------------------------RRGKINERLRCLQDIVPGCYKTM--- 183
RV RR KI+ER++ LQD+VPGC K
Sbjct: 173 RVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKISERMKLLQDLVPGCNKVAKFS 232
Query: 184 -----------GMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
G +MLDEIINYVQSLQ QVEFLSMKL+ + DF+
Sbjct: 233 QKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFD 280
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 59/77 (76%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARRGQATDSHSLAER RR KIN R+ L+++VPGC K G ++LDEIIN+VQSLQ QVE
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 205 FLSMKLTAASTFYDFNS 221
+LSM+L A + DF
Sbjct: 61 YLSMRLAAVNPRVDFGG 77
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 116 KRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDI 175
+RK+ R ++ K KE + VHVRARRG+ATD HSLAERVRR KI+ R++ LQ +
Sbjct: 138 ERKRPEPRARKEKKVAKEHPLTG-YVHVRARRGEATDPHSLAERVRRKKISVRMKLLQSL 196
Query: 176 VPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTA 212
VPGC K G +LDEII +V SLQNQVEFL+ K T+
Sbjct: 197 VPGCDKLTGKAQILDEIIRHVLSLQNQVEFLAAKFTS 233
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
Query: 128 KGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTM 187
K N K E + +HVRAR+GQATDSHSL ERVRR KI+ER++ LQ++VPGC K G
Sbjct: 120 KANSKPPE---DYIHVRARKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAF 176
Query: 188 MLDEIINYVQSLQNQVE 204
MLDEIINYVQSLQ QVE
Sbjct: 177 MLDEIINYVQSLQRQVE 193
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 58/70 (82%)
Query: 131 EKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLD 190
EK E+K ++ +HVRARRG+ATDSHSLAERVRR +I+ER++ L+ +VPGC K G MLD
Sbjct: 138 EKNEDKKQDYIHVRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKITGKAGMLD 197
Query: 191 EIINYVQSLQ 200
EIINYVQSLQ
Sbjct: 198 EIINYVQSLQ 207
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/67 (73%), Positives = 57/67 (85%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
++ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQ
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQ 60
Query: 198 SLQNQVE 204
LQ QVE
Sbjct: 61 FLQRQVE 67
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 74/138 (53%), Gaps = 35/138 (25%)
Query: 111 EIETNKRKKNSGRRKRVKGNE------KEEEKSKEVVHVRARRGQATDSHSLAERVRRGK 164
++ T+ + +G KG E E + K+ +HVRARRGQATDSHSLAERVRR K
Sbjct: 240 KLSTDAARDEAGSHGNGKGKEVAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREK 299
Query: 165 INERLRCLQDIVPGC-----------------------------YKTMGMTMMLDEIINY 195
I+ER++ LQD+VPGC K G +MLDEIINY
Sbjct: 300 ISERMKLLQDLVPGCSKVSKHRRPLLKIRLKTHAYFNFQRLLDLVKVTGKAVMLDEIINY 359
Query: 196 VQSLQNQVEFLSMKLTAA 213
VQSLQ QVE + L +A
Sbjct: 360 VQSLQCQVEVRAYDLHSA 377
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 59/80 (73%)
Query: 134 EEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEII 193
E ++ + VRARRGQATDS S+AE VR KI +R++ LQD+VPGC K G T MLDEII
Sbjct: 2 EYSKQDFIRVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDLVPGCRKVTGKTDMLDEII 61
Query: 194 NYVQSLQNQVEFLSMKLTAA 213
NYVQSLQ Q E LSMKL A
Sbjct: 62 NYVQSLQCQAESLSMKLGAV 81
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 86/167 (51%), Gaps = 9/167 (5%)
Query: 54 DNFFEFPGNLAENFPGNFIQNNMLPVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIE 113
DNF F E+F + + +P T S N+ +V E+S +
Sbjct: 56 DNFTTF-----EDFSHFYDNHQAVPYVLTAVS----DNNKNSVHFQETSQDKKISRQRFR 106
Query: 114 TNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQ 173
N K+++ R + V+VRARRG+A DSHSLAERVRR KI+ +++ LQ
Sbjct: 107 RNDMKEDNVCRSGSLARKDATVNEDGFVYVRARRGEAVDSHSLAERVRRQKISSKMKLLQ 166
Query: 174 DIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
+VPGC KT G +LD IINY+ SLQ+QV+ L +L +D N
Sbjct: 167 SLVPGCDKTTGKVPILDTIINYIHSLQDQVKSLMEELALVDPTFDVN 213
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 75/113 (66%), Gaps = 5/113 (4%)
Query: 100 ESSNEDSSPVSEIETN-KRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAE 158
ES E +P S + TN +R++ + R+K+ E VHVRARRG+ATDSHSLAE
Sbjct: 37 ESKREKRNPKSSVSTNLERQRPTKRQKKAP----PLEHPTGYVHVRARRGEATDSHSLAE 92
Query: 159 RVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLT 211
RVRR +I+ +++ LQ +VPGC + G ++LDEII YVQSL++++ L +L
Sbjct: 93 RVRRERISAKMKLLQSLVPGCDQITGKALILDEIIRYVQSLKDRIGSLEAELV 145
>gi|30695832|ref|NP_567057.2| transcription factor bHLH60 [Arabidopsis thaliana]
gi|122214701|sp|Q3EAI1.1|BH060_ARATH RecName: Full=Transcription factor bHLH60; AltName: Full=Basic
helix-loop-helix protein 60; Short=AtbHLH60; Short=bHLH
60; AltName: Full=Transcription factor EN 91; AltName:
Full=bHLH transcription factor bHLH060
gi|332646181|gb|AEE79702.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 426
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 67/135 (49%), Gaps = 47/135 (34%)
Query: 133 EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYK----------- 181
EE + VHVRARRGQATDSHSLAER RR KIN R++ LQ++VPGC K
Sbjct: 194 EENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIK 253
Query: 182 ------------------------------------TMGMTMMLDEIINYVQSLQNQVEF 205
G ++LDEIIN+VQSLQ QVE
Sbjct: 254 VCFGVHLLMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEM 313
Query: 206 LSMKLTAASTFYDFN 220
LSM+L A + DFN
Sbjct: 314 LSMRLAAVNPRIDFN 328
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats.
Identities = 49/62 (79%), Positives = 54/62 (87%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G +MLDEIINYVQSLQ Q
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 60
Query: 203 VE 204
VE
Sbjct: 61 VE 62
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 125 KRVKGNEKEEEKSKE----VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCY 180
KRV+ +K+++ E VHVRARRG+ATDSHSLAERVRR KI+ R++ LQ +VPGC
Sbjct: 139 KRVRPAKKQKKVPVEPPTGYVHVRARRGEATDSHSLAERVRREKISSRMKLLQSLVPGCD 198
Query: 181 KTMGMTMMLDEIINYVQSLQNQVEF 205
K G ++LDEII+YVQ L+++V+
Sbjct: 199 KITGKALVLDEIISYVQFLKDRVQV 223
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 55/82 (67%)
Query: 130 NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
+ K E K+ +HVRARRGQ DSH AERVRR KI+E L LQD+VP + G L
Sbjct: 8 DTKPPEPPKDYIHVRARRGQPADSHRFAERVRREKISEMLTLLQDLVPDSSRITGKADSL 67
Query: 190 DEIINYVQSLQNQVEFLSMKLT 211
DEIINYVQSL+ QVE L MKL
Sbjct: 68 DEIINYVQSLKRQVELLYMKLA 89
>gi|125526611|gb|EAY74725.1| hypothetical protein OsI_02616 [Oryza sativa Indica Group]
Length = 467
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 72/132 (54%), Gaps = 20/132 (15%)
Query: 101 SSNEDSSPVSEIETNKRKKNSGRRKRVKGN--EKEEEKSKEVVHVRARRGQATDSHSLAE 158
+ +ED+ PV+ ++G KG + E K+ +HVRARRGQATDSHSLAE
Sbjct: 238 AGDEDTKPVA--------GDAGHGGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAE 289
Query: 159 RVRRGKINERLR--------CLQDIVPGCY--KTMGMTMMLDEIINYVQSLQNQVEFLSM 208
RV + + D + + + G +MLDEIINYVQSLQ QVEFLSM
Sbjct: 290 RVNTAGVYAAIHNFVFSSILAFADAIAAVFHLQVTGKAVMLDEIINYVQSLQRQVEFLSM 349
Query: 209 KLTAASTFYDFN 220
KL+ + DF+
Sbjct: 350 KLSTVNPQLDFD 361
>gi|388503752|gb|AFK39942.1| unknown [Medicago truncatula]
Length = 73
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/60 (73%), Positives = 55/60 (91%)
Query: 188 MLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETMQKAKAYKAKEMERLMKEG 247
MLDEIINYVQSLQ+QVEFLS+KLTAAST+YDFNSE+D +ETMQ+A+A +AKE+ R ++G
Sbjct: 1 MLDEIINYVQSLQHQVEFLSLKLTAASTYYDFNSEADDLETMQRARASEAKELARYKRDG 60
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 60/86 (69%), Gaps = 4/86 (4%)
Query: 144 RARRGQATDSHSL---AERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+ R+ + D+ SL +VRR +I+ER+R LQ +VPGC K G ++LDEIINYVQSLQ
Sbjct: 59 KKRKPREEDTASLNSAHSKVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQ 118
Query: 201 NQVEFLSMKLTAAS-TFYDFNSESDA 225
NQVEFLSM++ + S Y F +SDA
Sbjct: 119 NQVEFLSMRIASLSPVLYGFGIDSDA 144
>gi|225456606|ref|XP_002267823.1| PREDICTED: transcription factor bHLH79 isoform 2 [Vitis vinifera]
Length = 262
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 26/134 (19%)
Query: 79 VCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSK 138
+ T + + + N K ++IS + +E+ +E+E + + K + ++ E+ +
Sbjct: 97 IVSTSSGSGMNASNGKRMKISRTPDENGGSKAELEAS----SVAGEKPAEESKPAEQSKQ 152
Query: 139 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ +HVRARRGQATDSHSLAERV +G ++LDEIINY+QS
Sbjct: 153 DYIHVRARRGQATDSHSLAERV----------------------IGKALVLDEIINYIQS 190
Query: 199 LQNQVEFLSMKLTA 212
LQ QVEFLSMKL A
Sbjct: 191 LQRQVEFLSMKLEA 204
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
VRARRGQATD HS+AER+RR +I ER++ LQ++VP C KT MLDEI++YV+ L+
Sbjct: 19 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKT-DRAAMLDEIVDYVKFLRL 77
Query: 202 QVEFLSM-KLTAASTFYDFNSE 222
QV+ LSM +L AA ++
Sbjct: 78 QVKVLSMSRLGAAGAVAQLVAD 99
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 78/138 (56%), Gaps = 7/138 (5%)
Query: 129 GNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMM 188
G +S+ VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + M
Sbjct: 190 GGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-M 248
Query: 189 LDEIINYVQSLQNQVEFLSM-KLTAAST----FYDFNSESDAVETMQKAKAYKAKEMERL 243
LDEII+YV+ LQ QV+ LSM +L A+ D +SE E MQ + A
Sbjct: 249 LDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGG-ECMQGSGAQAGGRNSNN 307
Query: 244 MKEGNFACSSSSSFLTIT 261
G +S++ +T+T
Sbjct: 308 NGNGGNQTASTNDSMTVT 325
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 196 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQVQ 254
Query: 203 VEFLSM-KLTAAST----FYDFNSE--SDAVET 228
V+ LSM +L A D +SE SD V+T
Sbjct: 255 VKVLSMSRLGGAGAVAPLVADMSSEGVSDCVQT 287
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I+ER++ LQ++VP C KT MLDEI++YV+ L+ Q
Sbjct: 142 VRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKT-DRAAMLDEILDYVKFLRLQ 200
Query: 203 VEFLSM-KLTAASTF 216
V+ LSM +L AS
Sbjct: 201 VKVLSMSRLGGASAV 215
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 199 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQVQ 257
Query: 203 VEFLSM-KLTAAST----FYDFNSE--SDAVET 228
V+ LSM +L A D +SE SD V+T
Sbjct: 258 VKVLSMSRLGGAGAVAPLVADMSSEGVSDCVQT 290
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I+ER++ LQ++VP C KT MLDEI++YV+ L+ Q
Sbjct: 141 VRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKT-DRAAMLDEILDYVKFLRLQ 199
Query: 203 VEFLSM-KLTAASTF 216
V+ LSM +L AS
Sbjct: 200 VKVLSMSRLGGASAV 214
>gi|218194642|gb|EEC77069.1| hypothetical protein OsI_15464 [Oryza sativa Indica Group]
Length = 403
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 17/92 (18%)
Query: 131 EKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLD 190
E++ E +K+ +HVR R +I+ER++ LQ +VPGC K G +MLD
Sbjct: 192 EEKPEPAKDYIHVR-----------------RERISERMKLLQSLVPGCNKITGKALMLD 234
Query: 191 EIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
EIINYVQSLQ QVEFLSMKL + DF+S
Sbjct: 235 EIINYVQSLQRQVEFLSMKLATMNPQLDFDSH 266
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
VRARRGQATD HS+AER+RR +I ER++ LQ++VP C KT MLDEI++YV+ L+
Sbjct: 15 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKT-DRAAMLDEIVDYVKFLRL 73
Query: 202 QVEFLSM-KLTAASTFYDF 219
Q++ LSM +L AA
Sbjct: 74 QIKVLSMSRLGAAGAVAQL 92
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 68/117 (58%), Gaps = 12/117 (10%)
Query: 108 PVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINE 167
P+S + K NSG GN + RARRGQATD HS+AER+RR KI+E
Sbjct: 295 PISHSADVQHKANSG-----NGNSASAKP-----RARARRGQATDPHSIAERLRREKISE 344
Query: 168 RLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM-KLTAASTFYDFNSES 223
R++ LQD+VP K + MLDEII+YV+ LQ QV+ LSM +L A +ES
Sbjct: 345 RMKNLQDLVPNSNKA-DKSSMLDEIIDYVKFLQLQVKVLSMSRLGAPGAVLPLLAES 400
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR KI++R++ LQD+VP K MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 378
Query: 203 VEFLSM-KLTAASTFYDFNSES 223
V+ LSM +L A +ES
Sbjct: 379 VKVLSMSRLGAPGAVLPLLTES 400
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 73/119 (61%), Gaps = 16/119 (13%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP C KT MLDEI++YV+ L+ Q
Sbjct: 157 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQ 215
Query: 203 VEFLSM-KLTAASTFYDF-------NSESDAVETMQKAKAYKA-------KEMERLMKE 246
V+ LSM +L A + E + +E+ +A++ +++ +LM+E
Sbjct: 216 VKVLSMSRLGGAGAVAQLVADVPLSSVEGEGIESGNNQQAWEKWSSDGTEQQVAKLMEE 274
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 73/119 (61%), Gaps = 16/119 (13%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP C KT MLDEI++YV+ L+ Q
Sbjct: 58 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKT-DRAAMLDEIVDYVKFLRLQ 116
Query: 203 VEFLSM-KLTAASTFYDF-------NSESDAVETMQKAKAYKA-------KEMERLMKE 246
V+ LSM +L A + E + +E+ +A++ +++ +LM+E
Sbjct: 117 VKVLSMSRLGGAGAVAQLVADVPLSSVEGEGIESGNNQQAWEKWSSDGTEQQVAKLMEE 175
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 72/111 (64%), Gaps = 8/111 (7%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 197 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQLQ 255
Query: 203 VEFLSM-KLTAASTFYDFNSE--SDAVETMQK----AKAYKAKEMERLMKE 246
V+ LSM +L A+ +E D ++ + + A +++ +LM+E
Sbjct: 256 VKVLSMSRLGGAAAVAPLVAEGGGDCIQAKRSNSNDSLAMTEQQVAKLMEE 306
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 60/85 (70%), Gaps = 6/85 (7%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQD+VP KT + MLDEI++YV+ LQ Q
Sbjct: 4 VRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANKTDKAS-MLDEIVDYVKFLQLQ 62
Query: 203 VEFLSM-KLTAA----STFYDFNSE 222
V+ LSM +L +A S D SE
Sbjct: 63 VKVLSMSRLGSAAAVPSLVADLPSE 87
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 247 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQLQ 305
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 306 VKVLSM 311
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQD+VP KT MLDEI++YV+ L+ Q
Sbjct: 181 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKT-DRAAMLDEILDYVKFLRLQ 239
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 240 VKVLSM 245
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR KI++R++ LQD+VP K + MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKAS-MLDEIIDYVKFLQLQ 378
Query: 203 VEFLSM-KLTAASTFYDFNSES 223
V+ LSM +L A +ES
Sbjct: 379 VKVLSMSRLGAPGAVLPLLAES 400
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR KI++R++ LQD+VP K + MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKAS-MLDEIIDYVKFLQLQ 378
Query: 203 VEFLSM-KLTAASTFYDFNSES 223
V+ LSM +L A +ES
Sbjct: 379 VKVLSMSRLGAPGAVLPLLAES 400
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR KI ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 136 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQLQ 194
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 195 VKVLSM 200
>gi|147818198|emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]
Length = 484
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 67/137 (48%), Gaps = 25/137 (18%)
Query: 78 PVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRR--KRVKGNEKEEE 135
P +T S E E SE S E +I+ N G++ K K N E
Sbjct: 197 PPLNTSKSADGEQPKGLPWENSEFSKEQEEKKQKIDQNMSPNLRGKQPNKHAKDNSSNGE 256
Query: 136 KSKE-VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIIN 194
KE +HVRARRGQAT+SHSLAER+ G +MLDEIIN
Sbjct: 257 APKENYIHVRARRGQATNSHSLAERI----------------------TGKAVMLDEIIN 294
Query: 195 YVQSLQNQVEFLSMKLT 211
YVQSLQ QVEFLSMKL
Sbjct: 295 YVQSLQQQVEFLSMKLA 311
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 174 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQLQ 232
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 233 VKVLSM 238
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%), Gaps = 6/88 (6%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 37 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQLQ 95
Query: 203 VEFLSM-KLTAAST----FYDFNSESDA 225
V+ LSM +L A+ D +SE+
Sbjct: 96 VKVLSMSRLGGAAAVAPLVADMSSEAGG 123
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 6/109 (5%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 128 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKAS-MLDEIIDYVKFLQLQ 186
Query: 203 VEFLSM-KLTAASTFYDFNSESDAVETMQKAKAYKAK----EMERLMKE 246
V+ LSM +L A++ SE + + +AK ++ +LM+E
Sbjct: 187 VKVLSMSRLGGAASVSSQISEDAGGSHENTSSSGEAKMTEHQVAKLMEE 235
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDKAS-MLDEIIDYVKFLQVQ 202
Query: 203 VEFLSM-KLTAASTF 216
V+ LSM +L A
Sbjct: 203 VKVLSMSRLGGAGAV 217
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 138 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKAS-MLDEIIDYVKFLQLQ 196
Query: 203 VEFLSM-KLTAASTFYDFNSESDA 225
V+ LSM +L A++ SE+
Sbjct: 197 VKVLSMSRLGGAASVSSQLSEAGG 220
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR KI++R++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKAS-MLDEIIDYVKFLQLQ 372
Query: 203 VEFLSM-KLTAASTFYDFNSES 223
V+ LSM +L AA +E+
Sbjct: 373 VKVLSMSRLGAAEAVVPLLTET 394
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 8/102 (7%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 253 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQLQ 311
Query: 203 VEFLSM-KLTAAST----FYDFNSE--SDAVETMQKAKAYKA 237
V+ LSM +L A+ D +SE D ++ K+ A
Sbjct: 312 VKVLSMSRLGGAAAVAPLVADMSSEGGGDCIQANGKSNGGGA 353
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQD+VP KT MLDEI++YV+ L+ Q
Sbjct: 132 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKT-DRAAMLDEILDYVKFLRLQ 190
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 191 VKVLSM 196
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 225 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQLQ 283
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 284 VKVLSM 289
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ
Sbjct: 181 TRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKAS-MLDEIIDYVKFLQ 239
Query: 201 NQVEFLSM 208
QV+ LSM
Sbjct: 240 LQVKVLSM 247
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR KI++R++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKAS-MLDEIIDYVKFLQLQ 372
Query: 203 VEFLSM-KLTAASTFYDFNSES 223
V+ LSM +L AA +E+
Sbjct: 373 VKVLSMSRLGAAEAVVPLLTET 394
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 6/109 (5%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 187 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKAS-MLDEIIDYVKFLQLQ 245
Query: 203 VEFLSM-KLTAASTFYDFNSESDAVETMQKAKAYKAK----EMERLMKE 246
V+ LSM +L A++ SE + + +AK ++ +LM+E
Sbjct: 246 VKVLSMSRLGGAASASSQISEDAGGSHENTSSSGEAKMTEHQVAKLMEE 294
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 6/109 (5%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKAS-MLDEIIDYVKFLQLQ 188
Query: 203 VEFLSM-KLTAASTFYDFNSESDAVETMQKAKAYKAK----EMERLMKE 246
V+ LSM +L A++ SE + + +AK ++ +LM+E
Sbjct: 189 VKVLSMSRLGGAASASSQISEDAGGSHENTSSSGEAKMTEHQVAKLMEE 237
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 70/109 (64%), Gaps = 6/109 (5%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKAS-MLDEIIDYVKFLQLQ 188
Query: 203 VEFLSM-KLTAASTFYDFNSESDAVETMQKAKAYKAKEME----RLMKE 246
V+ LSM +L A++ SE + + +AK E +LM+E
Sbjct: 189 VKVLSMSRLGGAASASSQISEDAGGSHENTSSSGEAKMTEHQXAKLMEE 237
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEI++YV+ LQ Q
Sbjct: 240 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIVDYVKFLQLQ 298
Query: 203 VEFLSM-KLTAAST----FYDFNSES 223
V+ LSM +L A+ D +SE
Sbjct: 299 VKVLSMSRLGGAAAVAPLVADMSSEG 324
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEI++YV+ LQ Q
Sbjct: 239 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIVDYVKFLQLQ 297
Query: 203 VEFLSM-KLTAAST----FYDFNSES 223
V+ LSM +L A+ D +SE
Sbjct: 298 VKVLSMSRLGGAAAVAPLVADMSSEG 323
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 138 IRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKAS-MLDEIIDYVEFLQLQ 196
Query: 203 VEFLSM-KLTAASTFYDFNSESDA 225
V+ LSM +L A++ SE+
Sbjct: 197 VKVLSMSRLGGAASVSSQISEAGG 220
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR KI++R++ LQD+VP K + MLDEII+YV+ LQ Q
Sbjct: 317 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKAS-MLDEIIDYVKFLQLQ 375
Query: 203 VEFLSMKLTAA 213
V+ LSM A
Sbjct: 376 VKVLSMSRVGA 386
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%), Gaps = 6/88 (6%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 256 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQLQ 314
Query: 203 VEFLSM-KLTAAST----FYDFNSESDA 225
V+ LSM +L A+ D +SE
Sbjct: 315 VKVLSMSRLGGAAAVAPLVADISSEGGG 342
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ
Sbjct: 30 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKTDKAS-MLDEIIDYVKFLQL 88
Query: 202 QVEFLSM-KLTAASTFYD 218
QV+ LSM +L A +
Sbjct: 89 QVKVLSMSRLGGAGALVN 106
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 138 IRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKAS-MLDEIIDYVKFLQLQ 196
Query: 203 VEFLSM-KLTAASTFYDFNSESDA 225
V+ LSM +L A++ SE+
Sbjct: 197 VKVLSMSRLGGAASVSSQISEAGG 220
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR KI++R++ LQD+VP K + MLDEII+YV+ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKAS-MLDEIIDYVKFLQLQ 340
Query: 203 VEFLSMKLTAA 213
V+ LSM A
Sbjct: 341 VKVLSMSRVGA 351
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 138 IRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKAS-MLDEIIDYVKFLQLQ 196
Query: 203 VEFLSM-KLTAASTFYDFNSESDA 225
V+ LSM +L A++ SE+
Sbjct: 197 VKVLSMSRLGGAASVSSQISEAGG 220
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ
Sbjct: 31 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKTDKAS-MLDEIIDYVKFLQL 89
Query: 202 QVEFLSM-KLTAASTF 216
QV+ LSM +L A
Sbjct: 90 QVKVLSMSRLGGAGAL 105
>gi|224147575|ref|XP_002336501.1| predicted protein [Populus trichocarpa]
gi|222835782|gb|EEE74217.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 81/136 (59%), Gaps = 21/136 (15%)
Query: 1 MADFAQDLQYFRASSSFPFLDIDPNIEQINNNLSV-----LDNTSLLNYQSFMPFSNPDN 55
MADF DLQ F+ FPFLDID ++ IN V LDN + N+ SF PF++ +N
Sbjct: 1 MADFTVDLQSFKPP--FPFLDIDASMAAINQFTEVNQAIQLDNPIMNNFHSFTPFTS-NN 57
Query: 56 FF-----EFPGNLAENF-PGNFIQN--NMLPVCHTVTSTKCESK----NRKAVEISESSN 103
FF EFPGN A +F PG+F QN N++PV T T ES+ R+A+++SESS
Sbjct: 58 FFSHQAPEFPGNFAGSFLPGSFHQNDQNVMPVSQTFTIPAKESEFQESKRRAMDVSESSC 117
Query: 104 EDSSP-VSEIETNKRK 118
+S P VSE + KRK
Sbjct: 118 MNSYPRVSESGSKKRK 133
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 204 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKAS-MLDEIIDYVKFLQLQ 262
Query: 203 VEFLSM-KLTAASTF 216
V+ LSM +L A+
Sbjct: 263 VKVLSMSRLGGAAGM 277
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 204 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKAS-MLDEIIDYVKFLQLQ 262
Query: 203 VEFLSM-KLTAASTF 216
V+ LSM +L A+
Sbjct: 263 VKVLSMSRLGGAAGM 277
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%), Gaps = 6/88 (6%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 104 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQLQ 162
Query: 203 VEFLSM-KLTAAST----FYDFNSESDA 225
V+ LSM +L A+ D +SE
Sbjct: 163 VKVLSMSRLGGAAAVAPLVADMSSEGGG 190
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RARRGQATD HS+AER+RR KI+ER++ LQD+VP K + MLDEII+YV+ LQ Q
Sbjct: 315 TRARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKAS-MLDEIIDYVKFLQLQ 373
Query: 203 VEFLSMKLTAA 213
V+ LSM A
Sbjct: 374 VKVLSMSRLGA 384
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT +MLDEI++YV+ L+ Q
Sbjct: 122 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAVMLDEILDYVKFLRLQ 180
Query: 203 VEFLSM-KLTAAST 215
V+ LSM +L A
Sbjct: 181 VKVLSMSRLGGAGA 194
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 58/85 (68%), Gaps = 6/85 (7%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT MLDEII YV+ LQ Q
Sbjct: 30 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIGYVKFLQLQ 88
Query: 203 VEFLSM-KLTAAST----FYDFNSE 222
V+ LSM +L A+ D +SE
Sbjct: 89 VKVLSMSRLGGAAAVAPLVADISSE 113
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR KI ER++ LQ++VP KT + MLDEII YV+ LQ Q
Sbjct: 149 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKAS-MLDEIIEYVKFLQLQ 207
Query: 203 VEFLSM-KLTAASTFYDFNSESDA 225
V+ LSM +L AA ++ A
Sbjct: 208 VKVLSMSRLGAAEAVVPLITDGQA 231
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 116 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILDYVKFLRLQ 174
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 175 VKVLSM 180
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 115 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILDYVKFLRLQ 173
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 174 VKVLSM 179
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 217 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQLQ 275
Query: 203 VEFLSMKLTAAST 215
V+ LS+ +T
Sbjct: 276 VKVLSVSRLGGAT 288
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR KI ER++ LQ++VP KT + MLDEII YV+ LQ Q
Sbjct: 296 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKAS-MLDEIIEYVKFLQLQ 354
Query: 203 VEFLSM-KLTAASTFYDFNSESDA 225
V+ LSM +L AA ++ A
Sbjct: 355 VKVLSMSRLGAAEAVVPLITDGQA 378
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 124 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILDYVKFLRLQ 182
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 183 VKVLSM 188
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR KI++R++ LQD+VP K + MLDEII++V+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKAS-MLDEIIDHVKFLQLQ 378
Query: 203 VEFLSM-KLTAASTFYDFNSES 223
V+ LSM +L A +ES
Sbjct: 379 VKVLSMSRLGAPGAVLPLLAES 400
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 24 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILDYVKFLRLQ 82
Query: 203 VEFLSM-KLTAASTFYDFNSE 222
V+ LSM +L A ++
Sbjct: 83 VKVLSMSRLGGAGAVAQLVAD 103
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I+ER++ LQ++VP C KT ++DEI++YV+ L+ Q
Sbjct: 134 VRARRGQATDPHSIAERLRRERISERIKALQELVPNCNKT-DRAALVDEILDYVKFLRLQ 192
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 193 VKVLSM 198
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 133 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILDYVKFLRLQ 191
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 192 VKVLSM 197
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RARRGQATD HS+AER+RR KI+ER++ LQD+VP K + MLDEII+YV+ LQ Q
Sbjct: 319 ARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKA-DKSSMLDEIIDYVKFLQLQ 377
Query: 203 VEFLSM-KLTAASTFYDFNSES 223
V+ L M +L A +ES
Sbjct: 378 VKVLCMSRLGAPGAVLPLLAES 399
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 133 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILDYVKFLRLQ 191
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 192 VKVLSM 197
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII YV+ LQ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKAS-MLDEIIEYVRFLQLQ 157
Query: 203 VEFLSM-KLTAASTF 216
V+ LSM +L A +
Sbjct: 158 VKVLSMSRLGGAGSV 172
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 70/119 (58%), Gaps = 16/119 (13%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 169 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKT-DRAAMLDEIVDYVKFLRLQ 227
Query: 203 VEFLSM-KLTAASTFYDFNS-------ESDAVETMQKAKAYKA-------KEMERLMKE 246
V+ LSM +L A + E D E +A++ +++ +LM+E
Sbjct: 228 VKVLSMSRLGGAGAVAQLVADVPLLSIEGDGTEGGSNQQAWEKWSTDGTEQQVAKLMEE 286
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 70/119 (58%), Gaps = 16/119 (13%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKT-DRAAMLDEIVDYVKFLRLQ 157
Query: 203 VEFLSM-KLTAASTFYDFNS-------ESDAVETMQKAKAYKA-------KEMERLMKE 246
V+ LSM +L A + E D E +A++ +++ +LM+E
Sbjct: 158 VKVLSMSRLGGAGAVAQLVADVPLLSIEGDGTEGGSNQQAWEKWSTDGTEQQVAKLMEE 216
>gi|3540186|gb|AAC34336.1| Hypothetical protein [Arabidopsis thaliana]
Length = 339
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 66/121 (54%), Gaps = 26/121 (21%)
Query: 92 NRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKE-VVHVRARRGQA 150
N+KAVE + ED ++ K K + + K + + EE KE +H+RARRGQA
Sbjct: 157 NKKAVEEFQ---EDPQRGNDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMRARRGQA 213
Query: 151 TDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKL 210
T+SHSLAER+ G +MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 214 TNSHSLAERI----------------------TGKAVMLDEIINYVQSLQQQVEFLSMKL 251
Query: 211 T 211
Sbjct: 252 A 252
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII YV+ LQ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKAS-MLDEIIEYVRFLQLQ 157
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 158 VKVLSM 163
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP K+ MLDEI++YV+ L+ Q
Sbjct: 180 VRARRGQATDPHSIAERLRRERIAERMRALQELVPSINKS-DRAAMLDEIVDYVKFLRLQ 238
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 239 VKVLSM 244
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT M+DEI++YV+ L+ Q
Sbjct: 163 VRARRGQATDPHSIAERLRRERIAERMKALQELVPTANKT-DRAAMIDEIVDYVKFLRLQ 221
Query: 203 VEFLSM-KLTAASTFYDFNSE 222
V+ LSM +L AA ++
Sbjct: 222 VKVLSMSRLGAAGAVAQLVAD 242
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 151 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKT-DRAAMLDEIVDYVKFLRLQ 209
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 210 VKVLSM 215
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 59/88 (67%), Gaps = 6/88 (6%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQAT HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 260 VRARRGQATHPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQLQ 318
Query: 203 VEFLSM-KLTAAST----FYDFNSESDA 225
V+ LSM +L A+ D +SE
Sbjct: 319 VKVLSMSRLGGAAAVAPLVADMSSEGGG 346
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATD HS+AER+RR KI+ER++ LQ++VP K + MLDEII+YV+ LQ QV
Sbjct: 322 RARRGQATDPHSIAERLRREKISERMKNLQELVPNSNKA-DKSSMLDEIIDYVKFLQLQV 380
Query: 204 EFLSMKLTAA 213
+ LSM A
Sbjct: 381 KVLSMSRLGA 390
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ QV
Sbjct: 196 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQLQV 254
Query: 204 EFLSMKLTAAST 215
+ LSM +T
Sbjct: 255 KVLSMSRLGGAT 266
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ QV
Sbjct: 189 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQLQV 247
Query: 204 EFLSMKLTAAST 215
+ LSM +T
Sbjct: 248 KVLSMSRLGGAT 259
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 166 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKT-DRAAMLDEIVDYVKFLRLQ 224
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 225 VKVLSM 230
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR KI ER++ LQ++VP K + MLDEII YV+ LQ Q
Sbjct: 351 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSK-VDKASMLDEIIEYVKFLQLQ 409
Query: 203 VEFLSMKLTAAS 214
V+ LSM A+
Sbjct: 410 VKVLSMSRLGAT 421
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ QV
Sbjct: 127 RARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILDYVKFLRLQV 185
Query: 204 EFLSM 208
+ LSM
Sbjct: 186 KVLSM 190
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 175 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKT-DRAAMLDEIVDYVKFLRLQ 233
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 234 VKVLSM 239
>gi|326521778|dbj|BAK00465.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 6/62 (9%)
Query: 138 KEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQ 197
++ +HVRARRGQATDSHSLAER RR KI ER++ LQD+VPGC K ++ + Y Q
Sbjct: 115 QDFIHVRARRGQATDSHSLAERARREKITERMKILQDLVPGCNK------LMRPWLGYWQ 168
Query: 198 SL 199
S+
Sbjct: 169 SI 170
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 169 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKT-DRAAMLDEIVDYVKFLRLQ 227
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 228 VKVLSM 233
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR KI++R++ LQ++VP +T + MLDEII YV+ LQ Q
Sbjct: 298 VRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKAS-MLDEIIEYVKFLQLQ 356
Query: 203 VEFLSMKLTAAS 214
V+ LSM A+
Sbjct: 357 VKVLSMSRLGAT 368
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 133 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILDYVKFLRLQ 191
Query: 203 VEFLSM 208
V+ LS+
Sbjct: 192 VKVLSI 197
>gi|293336149|ref|NP_001169231.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975699|gb|ACN32037.1| unknown [Zea mays]
gi|414885895|tpg|DAA61909.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 332
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 46/60 (76%)
Query: 122 GRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYK 181
G+ K E E + ++ +HVRARRGQAT+SHSLAER+RR KI+ER++ LQD+VPGC K
Sbjct: 232 GKSKGKGARETSESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSK 291
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RARRGQATD HS+AER+RR KI+ER++ LQ +VP K + MLDEII+YV+ LQ Q
Sbjct: 316 TRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKAS-MLDEIIDYVKFLQLQ 374
Query: 203 VEFLSMKLTAA 213
V+ LSM A
Sbjct: 375 VKVLSMSRLGA 385
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ QV
Sbjct: 195 RAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKAS-MLDEIIDYVRFLQLQV 253
Query: 204 EFLSM 208
+ LSM
Sbjct: 254 KVLSM 258
>gi|295913612|gb|ADG58051.1| transcription factor [Lycoris longituba]
Length = 95
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 42/56 (75%)
Query: 158 ERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAA 213
ERVRR +I ER++ LQ +VPGC K G ML+EIINYVQSLQ QVEFLSMKL
Sbjct: 3 ERVRRERIGERMKYLQGLVPGCNKITGKAGMLEEIINYVQSLQRQVEFLSMKLAGV 58
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 4/83 (4%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQLQ 308
Query: 203 VEFLSMKLTAAST---FYDFNSE 222
V +S AA+ D +SE
Sbjct: 309 VLSMSRLGGAAAVAPLVADMSSE 331
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RARRGQATD HS+AER+RR KI+ER++ LQ +VP K + MLDEII+YV+ LQ Q
Sbjct: 316 TRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKAS-MLDEIIDYVKFLQLQ 374
Query: 203 VEFLSMKLTAA 213
V+ LSM A
Sbjct: 375 VKVLSMSRLGA 385
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RARRGQATD HS+AER+RR KI+ER++ LQ +VP K + MLDEII+YV+ LQ Q
Sbjct: 316 TRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKAS-MLDEIIDYVKFLQLQ 374
Query: 203 VEFLSMKLTAA 213
V+ LSM A
Sbjct: 375 VKVLSMSRLGA 385
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RARRGQATD HS+AER+RR KI+ER++ LQ +VP K + MLDEII+YV+ LQ Q
Sbjct: 239 TRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKAS-MLDEIIDYVKFLQLQ 297
Query: 203 VEFLSMKLTAA 213
V+ LSM A
Sbjct: 298 VKVLSMSRLGA 308
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRG ATD HS+AER+RR KI ER++ LQ++VP K + MLDEII YV+ LQ Q
Sbjct: 240 VRARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNK-VDKASMLDEIIEYVKFLQLQ 298
Query: 203 VEFLSM-KLTAASTFYDF 219
V+ LSM +L AA
Sbjct: 299 VKVLSMSRLGAAGAVIPL 316
>gi|413951547|gb|AFW84196.1| putative HLH DNA-binding domain superfamily protein, partial [Zea
mays]
Length = 236
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 43/59 (72%)
Query: 163 GKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNS 221
G + + R LQD+VPGC K +G +MLDEIINYVQSLQ QVEFLSMKL + DFNS
Sbjct: 112 GPLGDCGRSLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNS 170
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ Q
Sbjct: 159 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQLQ 217
Query: 203 VE 204
V+
Sbjct: 218 VK 219
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 65/108 (60%), Gaps = 5/108 (4%)
Query: 107 SPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKIN 166
+P+++ E + GR K++ VRARRGQATD HS+AER+RR KI+
Sbjct: 250 TPLTDSENGVQCAEDGRNGNGVAVGGGAPKAR----VRARRGQATDPHSIAERLRREKIS 305
Query: 167 ERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS 214
+R++ LQ++VP KT + ML+EII Y++ LQ Q + LSM A+
Sbjct: 306 DRMKNLQELVPNSNKTDKAS-MLEEIIEYIKFLQLQTKVLSMSRLGAT 352
>gi|147797633|emb|CAN71939.1| hypothetical protein VITISV_038910 [Vitis vinifera]
Length = 381
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 56/95 (58%), Gaps = 25/95 (26%)
Query: 127 VKGNEKEEEKSKE-VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM 185
VK + + E KE +HVRA+RGQAT+SHSLAER+ G
Sbjct: 229 VKMSSQTGEAPKEDYIHVRAKRGQATNSHSLAERI----------------------TGK 266
Query: 186 TMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
+MLDEIINYVQSLQ QVEFLSMKL A+ + + N
Sbjct: 267 AVMLDEIINYVQSLQRQVEFLSMKL--ATVYPEMN 299
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 48/64 (75%), Gaps = 2/64 (3%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM--TMMLDEIINYVQSLQ 200
VRARRGQATD HS+AER+RR +I ER++ LQ++VP K M MLDEII+YV+ LQ
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQ 309
Query: 201 NQVE 204
QV+
Sbjct: 310 LQVK 313
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 59/91 (64%), Gaps = 11/91 (12%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM--TMMLDEIINYVQSLQ 200
VRARRGQATD HS+AER+RR +I ER++ LQ++VP K M MLDEII+YV+ LQ
Sbjct: 238 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQ 297
Query: 201 NQVE----FLSM-KLTAAST----FYDFNSE 222
QV+ LSM +L A+ D +SE
Sbjct: 298 LQVKASMHVLSMSRLGGAAAVAPLVADMSSE 328
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 5/65 (7%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTM-----MLDEIINYVQ 197
VRARRGQATD HS+AER+RR +I ER++ LQ++VP K + T+ MLDEII+YV+
Sbjct: 285 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYVK 344
Query: 198 SLQNQ 202
LQ Q
Sbjct: 345 FLQLQ 349
>gi|297820582|ref|XP_002878174.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324012|gb|EFH54433.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 439
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 133 EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYK 181
EE + VHVRARRGQATDSHSLAER RR KIN R++ LQ++VPGC K
Sbjct: 194 EENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDK 242
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 13/76 (17%)
Query: 180 YKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN------SESDAV------- 226
+ G ++LDEIIN+VQSLQ QVE LSM+L A + DFN SE+ ++
Sbjct: 301 FTIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNG 360
Query: 227 ETMQKAKAYKAKEMER 242
MQ A ++A E E+
Sbjct: 361 TPMQLAWPHQAIETEQ 376
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA+RG AT S+AERVRR KI+ER++ LQD+VP K + MLDE + YV+SLQ Q
Sbjct: 383 TRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQRQ 442
Query: 203 VEFLS---MKLTAAST---FYDF 219
V+ LS ++L AA+ F DF
Sbjct: 443 VQELSDTVVRLEAAAAQKIFSDF 465
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQD+VP K + MLD + Y++ LQNQ
Sbjct: 355 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQ 414
Query: 203 VEFLS 207
VE LS
Sbjct: 415 VETLS 419
>gi|414865639|tpg|DAA44196.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 201
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 136 KSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKT 182
K ++ VHVRA+RGQAT+SHSLAER RR KINER++ LQD+VPGC K
Sbjct: 147 KREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKA 193
>gi|307136009|gb|ADN33865.1| bHLH transcription factor [Cucumis melo subsp. melo]
Length = 135
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAA-STFYDFN 220
++ LQ +VPGC+K G MLDEIINYVQSLQNQVEFLSMKL + YDF
Sbjct: 1 MKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLASLHPVLYDFG 53
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR KI++R++ LQ++VP +T + MLDEII YV+ LQ Q
Sbjct: 298 VRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKAS-MLDEIIEYVKFLQLQ 356
Query: 203 VEFLSMKLT 211
V+ S + T
Sbjct: 357 VKVRSPRPT 365
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 13/123 (10%)
Query: 95 AVEISESSNEDSSPVSEIETNKRKKNSGRRKR----VKGNEKEEEKSKEVVHVRA----- 145
A+EI+ +S SS VS+ E K N RKR ++ E +S+E R
Sbjct: 224 AIEITGTS---SSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTTST 280
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R +A + H+L+ER RR +INER++ LQ+++P C K+ + MLDE I Y++SLQ Q++
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKAS-MLDEAIEYMKSLQLQIQM 339
Query: 206 LSM 208
+SM
Sbjct: 340 MSM 342
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 13/123 (10%)
Query: 95 AVEISESSNEDSSPVSEIETNKRKKNSGRRKR----VKGNEKEEEKSKEVVHVR-----A 145
A+EI+ +S SS VS+ E K N RKR ++ E +S+E R
Sbjct: 224 AIEITGTS---SSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTTST 280
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R +A + H+L+ER RR +INER++ LQ+++P C K+ + MLDE I Y++SLQ Q++
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKAS-MLDEAIEYMKSLQLQIQM 339
Query: 206 LSM 208
+SM
Sbjct: 340 MSM 342
>gi|195643094|gb|ACG41015.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 151
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAVE 227
+R LQ +VPGC K G ++LDEIINYVQSLQNQVEFLSM++ + S Y F +SD +
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGLDSDGLH 60
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 45/65 (69%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQD+VP K MLD + Y++ LQNQ
Sbjct: 337 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 396
Query: 203 VEFLS 207
VE LS
Sbjct: 397 VEALS 401
>gi|224101643|ref|XP_002312365.1| predicted protein [Populus trichocarpa]
gi|222852185|gb|EEE89732.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 39/55 (70%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL + D N E
Sbjct: 1 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEG 55
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 13/123 (10%)
Query: 95 AVEISESSNEDSSPVSEIETNKRKKNSGRRKR----VKGNEKEEEKSKEVVHVR-----A 145
A+EI+ +S SS VS+ E K N RKR ++ E +S+E R
Sbjct: 153 AIEITGTS---SSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTTST 209
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R +A + H+L+ER RR +INER++ LQ+++P C K+ + MLDE I Y++SLQ Q++
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKAS-MLDEAIEYMKSLQLQIQM 268
Query: 206 LSM 208
+SM
Sbjct: 269 MSM 271
>gi|115477539|ref|NP_001062365.1| Os08g0536800 [Oryza sativa Japonica Group]
gi|38175541|dbj|BAD01234.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|45736094|dbj|BAD13119.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|113624334|dbj|BAF24279.1| Os08g0536800 [Oryza sativa Japonica Group]
Length = 143
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAVE 227
+R LQ +VPGC K G ++LDEIINYVQSLQNQVEFLSM++ + S Y F +SD +
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGMDSDGLH 60
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 13/123 (10%)
Query: 95 AVEISESSNEDSSPVSEIETNKRKKNSGRRKR----VKGNEKEEEKSKEVVHVR-----A 145
A+EI+ +S SS VS+ E K N RKR ++ E +S+E R
Sbjct: 153 AIEITGTS---SSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTTST 209
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R +A + H+L+ER RR +INER++ LQ+++P C K+ + MLDE I Y++SLQ Q++
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKAS-MLDEAIEYMKSLQLQIQM 268
Query: 206 LSM 208
+SM
Sbjct: 269 MSM 271
>gi|449440508|ref|XP_004138026.1| PREDICTED: uncharacterized protein LOC101208544 [Cucumis sativus]
gi|449501436|ref|XP_004161366.1| PREDICTED: uncharacterized LOC101208544 [Cucumis sativus]
Length = 135
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAA-STFYDF 219
++ LQ +VPGC+K G +MLDEIINYVQSLQNQVEFLSMKL + +DF
Sbjct: 1 MKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLHDF 52
>gi|414886198|tpg|DAA62212.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 172
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
++ LQD+VPGC K +G +MLDEIINYVQSLQ QVEFLSMKL + DF++ S
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLS 55
>gi|414886200|tpg|DAA62214.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 161
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
++ LQD+VPGC K +G +MLDEIINYVQSLQ QVEFLSMKL + DF++ S
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLS 55
>gi|414886199|tpg|DAA62213.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 162
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSES 223
++ LQD+VPGC K +G +MLDEIINYVQSLQ QVEFLSMKL + DF++ S
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLS 55
>gi|326505424|dbj|BAJ95383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 199
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 38/41 (92%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYK 181
VH+RA+RGQAT+SHSLAER+RR KI+ER++ LQD+VPGC K
Sbjct: 136 VHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNK 176
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Query: 148 GQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
GQATD HS+AER+RR +I ER++ LQ++VP KT MLDEII+YV+ LQ QV+ LS
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANKTD-KASMLDEIIDYVKFLQLQVKVLS 227
Query: 208 M-KLTAAST 215
M +L A+
Sbjct: 228 MSRLGGAAA 236
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA RG AT S+AERVRRGKI+ER++ LQD+VP + MLD+ + YV+ LQ Q
Sbjct: 63 IRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMDRQTNTADMLDDAVEYVKQLQQQ 122
Query: 203 VEFLS 207
V+ LS
Sbjct: 123 VQELS 127
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQD+VP K MLD + Y++ LQNQ
Sbjct: 340 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 399
Query: 203 VEFLS 207
V+ LS
Sbjct: 400 VQTLS 404
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA RGQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ QV
Sbjct: 240 RAWRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS-MLDEIIDYVKFLQLQV 298
Query: 204 EFLSMKLTAAST---FYDFNSE 222
+S AA+ D +SE
Sbjct: 299 LSMSRLGGAAAVAPLVADMSSE 320
>gi|388493796|gb|AFK34964.1| unknown [Lotus japonicus]
gi|388513685|gb|AFK44904.1| unknown [Lotus japonicus]
Length = 180
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 39/52 (75%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
++ LQD+VPGC K G MLDEIINYVQSLQ QVEFLSMKL A + DFN
Sbjct: 1 MKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 52
>gi|79324891|ref|NP_001031530.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|330255009|gb|AEC10103.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 233
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 36/41 (87%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYK 181
VHVRARRGQATD+HSLAER RR KIN R++ LQ++VPGC K
Sbjct: 183 VHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDK 223
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++V KT + MLDEII+YV+ LQ Q
Sbjct: 145 VRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKAS-MLDEIIDYVKFLQLQ 203
Query: 203 VEFLSM 208
V LSM
Sbjct: 204 V--LSM 207
>gi|223948547|gb|ACN28357.1| unknown [Zea mays]
Length = 188
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLT 211
++ LQD+VPGC K G +MLDEIINYVQSLQ QVEFLSMKL+
Sbjct: 1 MKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLS 43
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER++ LQ++V KT + MLDEII+YV+ LQ Q
Sbjct: 117 VRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKAS-MLDEIIDYVKFLQLQ 175
Query: 203 VEFLSM 208
V LSM
Sbjct: 176 V--LSM 179
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQD+VP K MLD ++Y++ LQ Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 392
Query: 203 VEFLS 207
V+ LS
Sbjct: 393 VQTLS 397
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQD+VP K + MLD ++Y++ LQ Q
Sbjct: 339 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 398
Query: 203 VEFLS 207
VE LS
Sbjct: 399 VETLS 403
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 148 GQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
GQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNKTDKAS-MLDEIIDYVKFLQLQVKVLS 322
Query: 208 M 208
M
Sbjct: 323 M 323
>gi|224077848|ref|XP_002305434.1| predicted protein [Populus trichocarpa]
gi|222848398|gb|EEE85945.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
++ LQD+VPGC G MLDEIINYVQSLQ QVEFLSMKL A + DFN
Sbjct: 1 MKYLQDLVPGCNNITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 52
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 13/116 (11%)
Query: 114 TNKRKKNSGRRKRVKGNEKEEEKSKEV--------VHVR----ARRGQATDSHSLAERVR 161
T K + +RK +G++ E +S++V VR A+R +A + H+L+ER R
Sbjct: 223 TPKAPADDRKRKGREGDDTAEYQSEDVEFESADAKKQVRGSATAKRSRAAEVHNLSERRR 282
Query: 162 RGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFY 217
R +INE+++ LQ+++P C K+ + MLDE I Y++SLQ QV+ +SM + Y
Sbjct: 283 RDRINEKMKALQELIPRCNKSDKAS-MLDEAIEYLKSLQLQVQMMSMGCSMVPMMY 337
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 148 GQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
GQATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNKTDKAS-MLDEIIDYVKFLQLQVKVLS 322
Query: 208 M 208
M
Sbjct: 323 M 323
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQD+VP K MLD ++Y++ LQ Q
Sbjct: 330 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 389
Query: 203 VEFLS 207
V+ LS
Sbjct: 390 VQTLS 394
>gi|116309555|emb|CAH66617.1| OSIGBa0144C23.3 [Oryza sativa Indica Group]
Length = 157
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 39/54 (72%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 222
++ LQ +VPGC K G +MLDEIINYVQSLQ QVEFLSMKL + DF+S
Sbjct: 1 MKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLATMNPQLDFDSH 54
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 22/135 (16%)
Query: 83 VTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVH 142
+ S + RK E S+S +ED+ E E + K+S RR K
Sbjct: 175 LPSESASAHKRKGREDSDSRSEDA----ECEATEETKSSSRRYGSK-------------- 216
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RR +A + H+L+ER RR +INE++R LQ+++P C KT + +LDE I Y++SLQ Q
Sbjct: 217 ---RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKAS-ILDEAIEYLKSLQMQ 272
Query: 203 VEFLSMKLTAASTFY 217
V+ + M A +
Sbjct: 273 VQIMWMTTGMAPMMF 287
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 22/135 (16%)
Query: 83 VTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVH 142
+ S + RK E S+S +ED+ E E + K+S RR K
Sbjct: 186 LPSESASAHKRKGREDSDSRSEDA----ECEATEETKSSSRRYGSK-------------- 227
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RR +A + H+L+ER RR +INE++R LQ+++P C KT + +LDE I Y++SLQ Q
Sbjct: 228 ---RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKAS-ILDEAIEYLKSLQMQ 283
Query: 203 VEFLSMKLTAASTFY 217
V+ + M A +
Sbjct: 284 VQIMWMTTGMAPMMF 298
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 13/116 (11%)
Query: 114 TNKRKKNSGRRKRVKGNEKEEEKSKEV--------VHVR----ARRGQATDSHSLAERVR 161
T K + +RK +G++ E +S++V VR A+R +A + H+L+ER R
Sbjct: 261 TPKAPADDRKRKGREGDDTAEYQSEDVEFESADAKKQVRGSATAKRSRAAEVHNLSERRR 320
Query: 162 RGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFY 217
R +INE+++ LQ+++P C K+ + MLDE I Y++SLQ QV+ +SM + Y
Sbjct: 321 RDRINEKMKALQELIPRCNKSDKAS-MLDEAIEYLKSLQLQVQMMSMGCSMVPMMY 375
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I++R+R LQ++VP K MLDE + YV+ LQNQ
Sbjct: 118 IRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQ 177
Query: 203 VEFLS 207
+E LS
Sbjct: 178 IEELS 182
>gi|388509910|gb|AFK43021.1| unknown [Medicago truncatula]
Length = 102
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAST 215
++ LQD+VPGC K +G ++LDEIINY+QSLQ QVEFLSMKL A ++
Sbjct: 1 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 47
>gi|356527670|ref|XP_003532431.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 156
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAV 226
++ LQ +VPGC K G ++LDEIINYVQSLQNQVEFLSMKL + FYD + D +
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVNPMFYDLAIDLDTL 59
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 48/67 (71%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+ RA+RG AT S+AERVRR +I+ER++ LQD+VP KT + MLDE + YV+SLQ
Sbjct: 1 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQ 60
Query: 201 NQVEFLS 207
+V+ L+
Sbjct: 61 MKVKELT 67
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 22/135 (16%)
Query: 83 VTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVH 142
+ S + RK E S+S +ED+ E E + K+S RR K
Sbjct: 291 LPSESASAHKRKGREDSDSRSEDA----ECEATEETKSSSRRYGSK-------------- 332
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RR +A + H+L+ER RR +INE++R LQ+++P C KT + +LDE I Y++SLQ Q
Sbjct: 333 ---RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKAS-ILDEAIEYLKSLQMQ 388
Query: 203 VEFLSMKLTAASTFY 217
V+ + M A +
Sbjct: 389 VQIMWMTTGMAPMMF 403
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 22/135 (16%)
Query: 83 VTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVH 142
+ S + RK E S+S +ED+ E E + K+S RR K
Sbjct: 275 LPSESASAHKRKGREDSDSRSEDA----ECEATEETKSSSRRYGSK-------------- 316
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RR +A + H+L+ER RR +INE++R LQ+++P C KT + +LDE I Y++SLQ Q
Sbjct: 317 ---RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKAS-ILDEAIEYLKSLQMQ 372
Query: 203 VEFLSMKLTAASTFY 217
V+ + M A +
Sbjct: 373 VQIMWMTTGMAPMMF 387
>gi|255637743|gb|ACU19194.1| unknown [Glycine max]
Length = 156
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDFNSESDAV 226
++ LQ +VPGC K G ++LDEIINYVQSLQNQVEFLSMKL + FYD + D +
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVNPMFYDLAIDLDTL 59
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 98 ISESSNEDSSPVS---EIETNKRKK-NSGRRKRVKGNE--KEEEKSKEVVHVRARRGQAT 151
I++ D+ P + ET+K++K + V GN+ K + + R+ G+A
Sbjct: 116 IADDGGRDAVPATMETSTETDKKEKVPTTTEGVVMGNKVMKNKAPAGGPSSWRSHHGEA- 174
Query: 152 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLT 211
H L E+ RR KINERL+ LQ +VPGC K+ LD+ I+Y++SLQ QV+ +S+ L
Sbjct: 175 --HKLTEKRRRHKINERLKTLQQLVPGCSKS-NQASTLDQTIHYMKSLQQQVQAMSVGLA 231
Query: 212 AASTF 216
A + +
Sbjct: 232 APAVY 236
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 5/82 (6%)
Query: 131 EKEEEKSKEVVHVRA----RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMT 186
E+E +K+ RA +RG+A + H+L+ER RR +INE++R LQ+++P C K +
Sbjct: 299 EEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKA 357
Query: 187 MMLDEIINYVQSLQNQVEFLSM 208
MLDE I Y+++LQ QV+ +SM
Sbjct: 358 SMLDEAIEYLKTLQLQVQIMSM 379
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 5/82 (6%)
Query: 131 EKEEEKSKEVVHVRA----RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMT 186
E+E +K+ RA +RG+A + H+L+ER RR +INE++R LQ+++P C K +
Sbjct: 299 EEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKA 357
Query: 187 MMLDEIINYVQSLQNQVEFLSM 208
MLDE I Y+++LQ QV+ +SM
Sbjct: 358 SMLDEAIEYLKTLQLQVQIMSM 379
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 5/82 (6%)
Query: 131 EKEEEKSKEVVHVRA----RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMT 186
E+E +K+ RA +RG+A + H+L+ER RR +INE++R LQ+++P C K +
Sbjct: 299 EEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKA 357
Query: 187 MMLDEIINYVQSLQNQVEFLSM 208
MLDE I Y+++LQ QV+ +SM
Sbjct: 358 SMLDEAIEYLKTLQLQVQIMSM 379
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 5/82 (6%)
Query: 131 EKEEEKSKEVVHVRA----RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMT 186
E+E +K+ RA +RG+A + H+L+ER RR +INE++R LQ+++P C K +
Sbjct: 299 EEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKA 357
Query: 187 MMLDEIINYVQSLQNQVEFLSM 208
MLDE I Y+++LQ QV+ +SM
Sbjct: 358 SMLDEAIEYLKTLQLQVQIMSM 379
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 5/82 (6%)
Query: 131 EKEEEKSKEVVHVRA----RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMT 186
E+E +K+ RA +RG+A + H+L+ER RR +INE++R LQ+++P C K +
Sbjct: 299 EEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKA 357
Query: 187 MMLDEIINYVQSLQNQVEFLSM 208
MLDE I Y+++LQ QV+ +SM
Sbjct: 358 SMLDEAIEYLKTLQLQVQIMSM 379
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYK-TMGMTMMLDEIINYVQSLQN 201
VRA+RG AT S+AERVRR +I+ER+R LQ++VP K T+ + MLDE + YV+SLQ
Sbjct: 468 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQK 527
Query: 202 QVEFLS 207
QV+ L+
Sbjct: 528 QVQELA 533
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%)
Query: 141 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQ 200
+ RA+RG AT S+AERVRR KI+ER++ LQD+VP K + MLDE + YV+SLQ
Sbjct: 30 MRTRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVKSLQ 89
Query: 201 NQVEFLS 207
+V+ LS
Sbjct: 90 RKVQELS 96
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 6/83 (7%)
Query: 131 EKEEEKSKEVVHVRAR-----RGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM 185
+ E + +K VH R R R ++T+ H L ER RR + N+++R LQDI+P CYK
Sbjct: 203 DDESDDAKTQVHARIRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDILPNCYKDDKA 262
Query: 186 TMMLDEIINYVQSLQNQVEFLSM 208
+ +LDE + Y+++LQ+QV+ +SM
Sbjct: 263 S-LLDEAVKYMRTLQHQVQMMSM 284
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRG ATD S+ R RR KINERL+ LQ +VP K + + MLDE I+YVQ LQ QV
Sbjct: 443 RARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAK-VDIVTMLDEAIHYVQFLQLQV 501
Query: 204 EFL 206
L
Sbjct: 502 TLL 504
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 63/103 (61%), Gaps = 7/103 (6%)
Query: 114 TNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQ 173
TNK++K + K G E E K+ R+ G+A H+L E+ RR KINERL+ LQ
Sbjct: 135 TNKKQKVTPEGKM--GTE-EMRKAPAGGSSRSHHGEA---HNLTEKRRRHKINERLKTLQ 188
Query: 174 DIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTF 216
+VPGC K+ LD+ I+Y++SLQ+QV+ +S+ L + + +
Sbjct: 189 QLVPGCSKS-NQASTLDQTIHYMKSLQHQVQAMSVGLASPAVY 230
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
+RR + H+L E+ RR KINERL+ LQ +VPGC K+ LD+ I+Y++SLQ QV+
Sbjct: 188 SRRSHHGEGHNLTEKRRRHKINERLKTLQKLVPGCSKS-NQASTLDQTIHYMKSLQQQVQ 246
Query: 205 FLSMKLTAASTF 216
+S+ L A + +
Sbjct: 247 AMSVGLAAPAVY 258
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INE++R LQ+++P CYKT + MLDE I Y++SLQ Q++
Sbjct: 183 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCYKTDKAS-MLDEAIEYLKSLQLQLQV 241
Query: 206 LSMKLTAASTFY 217
+ M A +
Sbjct: 242 MWMGGGMAPMLF 253
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 8/120 (6%)
Query: 95 AVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGN------EKEEEKSKEVVHVRARRG 148
A+EI+ +S+ S SEIE K + +RK + EE K +R
Sbjct: 234 AIEITGTSSSVVS-KSEIEPEKTNFDDKKRKEREATTEEAECRSEETKQARGSTTSTKRS 292
Query: 149 QATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
+A + H+L+ER RR +INER++ LQ+++P C K+ + MLDE I Y++SLQ Q++ +SM
Sbjct: 293 RAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKAS-MLDEAIEYMKSLQLQIQVMSM 351
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQ++VP K + MLD + Y++ LQ Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 203 VEFLS 207
V+ LS
Sbjct: 419 VQTLS 423
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RG ATD S+ R RR KINERL+ LQ++VP K + + MLDE I+YV+ LQ QV
Sbjct: 443 RAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAK-VDIVTMLDEAIHYVKFLQTQV 501
Query: 204 EFL 206
E L
Sbjct: 502 ELL 504
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQ++VP K + MLD + Y++ LQ Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 203 VEFLS 207
V+ LS
Sbjct: 419 VQTLS 423
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 48/63 (76%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R ++++ H+L+ER RR +INE++R LQ++VP C K + ML+E+I Y++SLQ QV+
Sbjct: 217 KRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQA 276
Query: 206 LSM 208
+SM
Sbjct: 277 MSM 279
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 6/84 (7%)
Query: 130 NEKEEEKSKEVVHVRAR-----RGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMG 184
++ E + +K VH R R R ++T+ H L ER RR + N+++R LQD++P CYK
Sbjct: 205 SDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDK 264
Query: 185 MTMMLDEIINYVQSLQNQVEFLSM 208
+ +LDE I Y+++LQ QV+ +SM
Sbjct: 265 AS-LLDEAIKYMRTLQLQVQMMSM 287
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 74/125 (59%), Gaps = 16/125 (12%)
Query: 96 VEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEV----------VH--V 143
V ++ S + S +E R+ + R+++ + +E+ E +S++V VH
Sbjct: 201 VTVTSSPGDSSGSAEPVE---REPMADRKRKGREHEESEFQSEDVDFESPEAKKQVHGST 257
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
+R +A + H+L+ER RR +INE+++ LQ+++P C K+ + MLDE I Y++SLQ QV
Sbjct: 258 STKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKAS-MLDEAIEYLKSLQLQV 316
Query: 204 EFLSM 208
+ +SM
Sbjct: 317 QMMSM 321
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 6/84 (7%)
Query: 130 NEKEEEKSKEVVHVRAR-----RGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMG 184
++ E + +K VH R R R ++T+ H L ER RR + N+++R LQD++P CYK
Sbjct: 205 SDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDK 264
Query: 185 MTMMLDEIINYVQSLQNQVEFLSM 208
+ +LDE I Y+++LQ QV+ +SM
Sbjct: 265 AS-LLDEAIKYMRTLQLQVQMMSM 287
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 67/118 (56%), Gaps = 16/118 (13%)
Query: 101 SSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKE----------EEKSKEVVHVRARRGQA 150
SS+E+ PV ++ RK RK ++ E E E K + +R +A
Sbjct: 205 SSSEEPEPVGKVAEQDRK-----RKGIEAEEWEYQSEDVDFESAEAKKNISGSSTKRSRA 259
Query: 151 TDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
+ H+L+ER RR +INE+++ LQ+++P K+ + MLDE I+Y++SLQ QV+ +SM
Sbjct: 260 AEVHNLSERRRRDRINEKMKALQELIPRSNKSDKAS-MLDEAIDYLKSLQLQVQMMSM 316
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 112 IETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRC 171
I+T + ++GN K K + RA RG ATD SL R RR +INERLR
Sbjct: 159 IDTQSSSSCTSEEGNLEGNAKPSSKK---MGTRANRGAATDPQSLYARKRRERINERLRI 215
Query: 172 LQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
LQ++VP K + ++ ML+E + YV+ LQ Q++ LS
Sbjct: 216 LQNLVPNGTK-VDISTMLEEAVQYVKFLQLQIKLLS 250
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 112 IETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRC 171
I+T + ++GN K K + RA RG ATD SL R RR +INERLR
Sbjct: 159 IDTQSSSSCTSEEGNLEGNAKPSSKK---MGTRANRGAATDPQSLYARKRRERINERLRI 215
Query: 172 LQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
LQ++VP K + ++ ML+E + YV+ LQ Q++ LS
Sbjct: 216 LQNLVPNGTK-VDISTMLEEAVQYVKFLQLQIKLLS 250
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 292 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 351
Query: 203 VEFL 206
V+ L
Sbjct: 352 VKVL 355
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RG AT S+AERVRR +I+ER++ LQD+VP KT MLDE + YV+SLQ +V
Sbjct: 6 RAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKSLQVKV 65
Query: 204 EFL 206
L
Sbjct: 66 SEL 68
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA RG AT S+AERVRRGKI+ER++ LQ++VP + MLD+ + YV+ LQ Q
Sbjct: 379 LRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQ 438
Query: 203 VEFLS 207
V+ L+
Sbjct: 439 VQELT 443
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 219 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 278
Query: 203 VEFLS 207
V+ LS
Sbjct: 279 VKTLS 283
>gi|297728315|ref|NP_001176521.1| Os11g0442650 [Oryza sativa Japonica Group]
gi|255680061|dbj|BAH95249.1| Os11g0442650 [Oryza sativa Japonica Group]
Length = 461
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 55/116 (47%), Gaps = 42/116 (36%)
Query: 101 SSNEDSSPVSEIETNKRKKNSGRRKRVKGN--EKEEEKSKEVVHVRARRGQATDSHSLAE 158
+ +ED+ PV+ ++G KG + E K+ +HVRARRGQATDSHSLAE
Sbjct: 242 AGDEDTKPVA--------GDAGHGGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAE 293
Query: 159 R--------------------------------VRRGKINERLRCLQDIVPGCYKT 182
R VRR KI+ER++ LQD+VPGC K
Sbjct: 294 RVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKISERMKLLQDLVPGCNKV 349
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQD+VP K MLD ++Y++ LQ Q
Sbjct: 332 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 391
Query: 203 VEFL 206
+ L
Sbjct: 392 AQKL 395
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 285 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 344
Query: 203 VEFL 206
V+ L
Sbjct: 345 VKVL 348
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
Query: 104 EDSSPV---SEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERV 160
ED+ PV S + T+K++K ++E K +RR ++H+L E+
Sbjct: 131 EDAVPVIGTSTVTTDKKEKVP---SMTMTTTTDKEMRKTPGGGSSRRSHHGEAHNLTEKR 187
Query: 161 RRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
RR KINERL+ LQ IVPGC K+ LD+ I+Y++SLQ+QV+ +S
Sbjct: 188 RRHKINERLKTLQQIVPGCSKS-NQASTLDQTIHYMKSLQHQVQAMS 233
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 56/82 (68%), Gaps = 3/82 (3%)
Query: 130 NEKEEEKSKEVVH--VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTM 187
N++EE+ +K V + ARR +A H+ +ER RR +INE+++ LQ +VP KT +
Sbjct: 240 NQEEEQDTKRVANRSHSARRSRAAAIHNQSERRRRDRINEKMKALQKLVPNASKTDKAS- 298
Query: 188 MLDEIINYVQSLQNQVEFLSMK 209
MLDE+I Y++ LQ QV+F+S++
Sbjct: 299 MLDEVIEYLKQLQAQVQFMSVR 320
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQD+VP K + MLD ++Y++ LQ Q
Sbjct: 344 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 403
Query: 203 VEFLS 207
+ LS
Sbjct: 404 FKALS 408
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARR +A + H+L+ER RR +INE++R LQ+++P C KT + MLDE I Y+++LQ QV+
Sbjct: 32 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKAS-MLDEAIEYLKTLQMQVQ 90
Query: 205 FLSM 208
+ M
Sbjct: 91 MMWM 94
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RARRG AT S+AER RR +I+ER++ LQD+VP K MLDE + YV+ LQ QV
Sbjct: 16 RARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQV 75
Query: 204 EFLS 207
+ LS
Sbjct: 76 KDLS 79
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AERVRR +I++R+R LQ++VP K MLDE + YV+ LQ Q
Sbjct: 81 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQ 140
Query: 203 VEFLS 207
+E LS
Sbjct: 141 IEELS 145
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD SL R RR +INERLR LQ++VP K + ++ ML+E +NYV+ LQ Q
Sbjct: 261 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQLQ 319
Query: 203 VEFLS 207
++ LS
Sbjct: 320 IKLLS 324
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD SL R RR +INERLR LQ++VP K + ++ ML+E +NYV+ LQ Q
Sbjct: 264 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQLQ 322
Query: 203 VEFLS 207
++ LS
Sbjct: 323 IKLLS 327
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT SLAERVRR +I+ER+R LQ+IVP K + MLD + Y++ LQ Q
Sbjct: 243 IRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQ 302
Query: 203 VEFLSMK 209
++ +S K
Sbjct: 303 LKTMSAK 309
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AERVRR KI+ER+R LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 203 VEFL 206
V+ L
Sbjct: 357 VKAL 360
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AERVRR KI+ER+R LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 203 VEFL 206
V+ L
Sbjct: 357 VKAL 360
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RG AT S+AERVRR +I+ER+R LQD+VP K + MLD ++Y++ LQ QV
Sbjct: 33 RAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQV 92
Query: 204 EFLS 207
+ LS
Sbjct: 93 QTLS 96
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQD+VP MLD + Y++ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 203 VEFL 206
V+ L
Sbjct: 364 VKAL 367
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARR +A + H+L+ER RR +INE++R LQ+++P C KT + MLDE I Y++SLQ QV+
Sbjct: 324 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKAS-MLDEAIEYLKSLQLQVQ 382
Query: 205 FLSM 208
+ M
Sbjct: 383 MMWM 386
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQD+VP MLD + Y++ LQ Q
Sbjct: 303 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 362
Query: 203 VEFL 206
V+ L
Sbjct: 363 VKTL 366
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
Query: 108 PVSEIE-TNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKIN 166
P +E + T++RK+ + V+ EE + ++R +A H L+ER RR KIN
Sbjct: 239 PATETDITDERKRKTREETNVENQGTEEARDS----TSSKRSRAAIMHKLSERRRRQKIN 294
Query: 167 ERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
E ++ LQ+++P C KT + MLD++I YV+SLQ+Q++ SM
Sbjct: 295 EMMKALQELLPRCTKT-DRSSMLDDVIEYVKSLQSQIQMFSM 335
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 127 VKGNEKEEEKSKEVVHVRARRG-QATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM 185
V G E K + + RARR + + +HSL ER RR KINE L+ LQ +VPGC K+
Sbjct: 96 VMGRRSESSKERRKI-TRARRSSRYSQTHSLTERKRRCKINENLKTLQQLVPGCDKSNNQ 154
Query: 186 TMMLDEIINYVQSLQNQVEFLS----MKLTAASTFY 217
LD+ I Y++SLQ V+ +S MK AA Y
Sbjct: 155 ASTLDKTIRYMKSLQQHVQAMSVGCIMKPAAAGVSY 190
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 92/199 (46%), Gaps = 35/199 (17%)
Query: 43 NYQSFMPFSNPDNFF---EFPGN--------LAENFP--GNFIQNNMLPVCHTVTSTKCE 89
+ ++F P +P F EF G+ L FP G+F + N+ V +V E
Sbjct: 48 HLKTFQPHPSP--FLASSEFSGDNKTLHEQPLRPEFPVLGDFARRNLPLVSSSVGDETAE 105
Query: 90 SKNRKAVEIS-----------ESSNEDSSPVSEIETNKRKKNSGRR-------KRVKGNE 131
R S S + SSP + E K+KK + +G E
Sbjct: 106 GTERGVCGTSGLSEAGVSGRQSSIGDQSSPRRDSEPCKKKKAHNDTDLDDLDCESEEGQE 165
Query: 132 KEEEKSKEVV-HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLD 190
EE SK +R +A + H+L+E+ RR +INE+++ LQ+++P KT + MLD
Sbjct: 166 PSEEMSKPAPSRSSTKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS-MLD 224
Query: 191 EIINYVQSLQNQVEFLSMK 209
E I Y++ LQ QV+ LSMK
Sbjct: 225 EAIEYLKQLQLQVQMLSMK 243
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQD+VP K MLD ++Y++ LQ Q
Sbjct: 282 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQ 341
Query: 203 VEFLS 207
+ LS
Sbjct: 342 FKTLS 346
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR ++ D H+ +ER RR +INE+LR LQ+++P C KT ++ MLDE I+Y++SLQ Q++
Sbjct: 17 RRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVS-MLDEAIDYLKSLQLQLQM 75
Query: 206 LSM 208
L M
Sbjct: 76 LVM 78
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 5/73 (6%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R ++ + H+L+ER RR +INE++R LQ+++P C K + MLDE I Y++SLQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 397
Query: 205 FLSMKLTAASTFY 217
+SM AS +Y
Sbjct: 398 IMSM----ASGYY 406
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQ++VP K MLD ++Y++ LQ Q
Sbjct: 325 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQ 384
Query: 203 VEFL 206
V+ L
Sbjct: 385 VKVL 388
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARR +A + H+L+ER RR +INE++R LQ+++P C KT + MLDE I Y++SLQ QV+
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKAS-MLDEAIEYLKSLQLQVQ 387
Query: 205 FLSM 208
+ M
Sbjct: 388 MMWM 391
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 317 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 376
Query: 203 VEFL 206
V+ L
Sbjct: 377 VKAL 380
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 56/85 (65%), Gaps = 13/85 (15%)
Query: 124 RKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTM 183
+KR++G+ + ++R +A + H+L+ER RR +INE++R LQ+++P C K+
Sbjct: 354 KKRIRGS------------MSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD 401
Query: 184 GMTMMLDEIINYVQSLQNQVEFLSM 208
+ MLDE I Y++SLQ QV+ +SM
Sbjct: 402 KAS-MLDEAIEYLKSLQLQVQMMSM 425
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 91 KNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEV---VHVRARR 147
K RK + N ++ +E E+N ++ G + KE++ SK + RA R
Sbjct: 213 KKRKNGAMMSRQNSSTTFCTEEESNCADQDGGGEDS---SSKEDDASKALNLNGKTRASR 269
Query: 148 GQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
G ATD SL R RR +INERLR LQ++VP K + ++ ML+E ++YV+ LQ Q++ LS
Sbjct: 270 GAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQIKLLS 328
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARR +A + H+L+ER RR +INE++R LQ+++P C KT + MLDE I Y++SLQ QV+
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKAS-MLDEAIEYLKSLQLQVQ 387
Query: 205 FLSM 208
+ M
Sbjct: 388 MMWM 391
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 131 EKEEEKSKEVVHVRA---RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTM 187
E+E K+ H R +R +A + H+L+ER RR +INE++R LQ+++P C K +
Sbjct: 434 EEEYMGVKKGDHARGMGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKAS 492
Query: 188 MLDEIINYVQSLQNQVEFLSM 208
MLDE I Y+++LQ QV+ +SM
Sbjct: 493 MLDEAIEYLKTLQLQVQMMSM 513
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 15/98 (15%)
Query: 124 RKRVKGNEKEE------------EKSKEVV-HVRARRGQATDSHSLAERVRRGKINERLR 170
RKR KG E EE E K+V +R +A + H+L+ER RR +INE+++
Sbjct: 271 RKR-KGREAEEWECQSEDVDFESEAKKQVCGSTSTKRSRAAEVHNLSERRRRDRINEKMK 329
Query: 171 CLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
LQ+++P C K+ + MLDE I+Y++SLQ QV+ +SM
Sbjct: 330 ALQELIPRCNKSDKAS-MLDEAISYLKSLQLQVQMMSM 366
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARR +A + H+L+ER RR +INE++R LQ+++P C KT + MLDE I Y+++LQ QV+
Sbjct: 311 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKAS-MLDEAIEYLKTLQMQVQ 369
Query: 205 FLSM 208
+ M
Sbjct: 370 MMWM 373
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 21/118 (17%)
Query: 91 KNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQA 150
+ RK + SE +ED E E+ KK +G R ++R +A
Sbjct: 397 RKRKDTDDSECHSEDV----EEESAGAKKTAGGRGGAG----------------SKRSRA 436
Query: 151 TDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
+ H+L+ER RR +INE++R LQ+++P C K + MLDE I Y+++LQ QV+ +SM
Sbjct: 437 AEVHNLSERKRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQIMSM 493
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 65/106 (61%), Gaps = 8/106 (7%)
Query: 109 VSEIETNKRKKNSGRRKRVKGNEKEEE-----KSKEV-VHVRARRGQATDSHSLAERVRR 162
VSE E +R + RKR KG E ++ +K+V +R +A + H+L+ER RR
Sbjct: 256 VSETEPVQRTTSLEDRKR-KGKETDDSDYLCYSTKQVRGSTSTKRSRAAEVHNLSERRRR 314
Query: 163 GKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
+INE+++ LQ+++P C K + MLDE I Y+++LQ QV+ +SM
Sbjct: 315 DRINEKMKALQELIPRCNKADKAS-MLDEAIEYLKTLQLQVQMMSM 359
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 5/73 (6%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R ++ + H+L+ER RR +INE++R LQ+++P C K + MLDE I Y++SLQ QV+
Sbjct: 337 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 395
Query: 205 FLSMKLTAASTFY 217
+SM AS +Y
Sbjct: 396 IMSM----ASGYY 404
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R +A + H+L+ER RR +INE++R LQ+++P C K+ + MLDE I Y++SLQ QV+
Sbjct: 357 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKAS-MLDEAIEYLKSLQLQVQM 415
Query: 206 LSM 208
+SM
Sbjct: 416 MSM 418
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARR +A + H+L+ER RR +INE++R LQ+++P C KT + MLDE I Y++SLQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKAS-MLDEAIEYLKSLQLQLQ 372
Query: 205 FLSM 208
+ M
Sbjct: 373 MMWM 376
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 14/101 (13%)
Query: 121 SGRRKRVKGNEKEEEKSKEVVH-------------VRARRGQATDSHSLAERVRRGKINE 167
S +RKR+ E E S++ ARR +A + H+L+ER RR +INE
Sbjct: 277 SSKRKRLDTTEDSESPSEDAESESAALARKPPAKMTTARRSRAAEVHNLSERRRRDRINE 336
Query: 168 RLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
++R LQ+++P C KT + MLDE I Y++SLQ Q++ + M
Sbjct: 337 KMRALQELIPHCNKTDKAS-MLDEAIEYLKSLQLQLQMMWM 376
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD SL R RR KINERLR LQ++VP K + ++ ML++ I+YV+ LQ Q
Sbjct: 198 ARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTK-VDISTMLEDAIHYVKFLQLQ 256
Query: 203 VEFLS 207
++ LS
Sbjct: 257 IKLLS 261
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 23/160 (14%)
Query: 61 GNLAENFPGNFIQNNMLPVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKN 120
GNL + P N NNM P + E + RKA E + ++ S +
Sbjct: 294 GNLQQERPSN---NNMTP-------PQKEVETRKASEAAGATATSSVCSGNGAGTGKDDE 343
Query: 121 SGRRKRVKGNEKE------EEKSKEVVHVR------ARRGQATDSHSLAERVRRGKINER 168
S R+++ K + E ++ E +R A+R + + H+L+ER RR +INE+
Sbjct: 344 SWRQQKRKTLQAECSASQDDDPDDESGGMRRSCSRGAKRSRTAEVHNLSERRRRDRINEK 403
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
+R LQ+++P C K + MLDE I Y+++LQ QV+ +SM
Sbjct: 404 MRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMSM 442
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQ++VP K MLD ++Y++ LQ Q
Sbjct: 160 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQ 219
Query: 203 VEFL 206
V+ L
Sbjct: 220 VKVL 223
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD ++Y++ LQ Q
Sbjct: 319 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 378
Query: 203 VEFL 206
V+ L
Sbjct: 379 VKVL 382
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD ++Y++ LQ Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 377
Query: 203 VEFL 206
V+ L
Sbjct: 378 VKVL 381
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 327 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 386
Query: 203 VEFL 206
V+ +
Sbjct: 387 VKVM 390
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 16/139 (11%)
Query: 83 VTSTKCESKNRKAVE-------ISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEE 135
V +TK + + KAVE S +S E +S + N+++K ++ EE
Sbjct: 385 VGATKGLADSEKAVESVFAASLCSRNSVEGAS--DDPPHNRKRKCHDTEDSEWHSDDVEE 442
Query: 136 KSKEVVHVRARRG------QATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
+V V + RG +A + H+L+ER RR +INE++R LQ+++P C K + ML
Sbjct: 443 DCNDVKRVTSARGAGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASML 501
Query: 190 DEIINYVQSLQNQVEFLSM 208
DE I Y+++LQ QV+ +SM
Sbjct: 502 DEAIEYLKTLQLQVQIMSM 520
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 61 GNLAENFPGNFIQNNMLPVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKN 120
GNL ++ P NNM P K E+K KA E++ ++ S E +++K+
Sbjct: 270 GNLHQDMPLGRPGNNMTP------QGKMETK--KACEVAVATPSLCSGNGESWREQKRKS 321
Query: 121 SGRRKRVKGNEKEEEKSKEVVHVR--ARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
+ ++ ++E +R + + H+L+ER RR +INE++R LQ+++P
Sbjct: 322 QAECSASQDDDLDDESGGMRGSGGRGTKRSRTAEVHNLSERRRRDRINEKMRALQELIPN 381
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
C K + MLDE I Y+++LQ QV+ ++M
Sbjct: 382 CNK-IDKASMLDEAIEYLKTLQLQVQMMAM 410
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 61 GNLAENFPGNFIQNNMLPVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKN 120
GNL ++ P NNM P K E+K KA E++ ++ S E +++K+
Sbjct: 80 GNLHQDMPLGRPGNNMTP------QGKMETK--KACEVAVATPSLCSGNGESWREQKRKS 131
Query: 121 SGRRKRVKGNEKEEEKSKEVVHVR--ARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
+ ++ ++E +R + + H+L+ER RR +INE++R LQ+++P
Sbjct: 132 QAECSASQDDDLDDESGGMRGSGGRGTKRSRTAEVHNLSERRRRDRINEKMRALQELIPN 191
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
C K + MLDE I Y+++LQ QV+ ++M
Sbjct: 192 CNK-IDKASMLDEAIEYLKTLQLQVQMMAM 220
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 91 KNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEV---VHVRARR 147
K RK + N ++ +E E+N ++ G + KE++ SK + RA R
Sbjct: 214 KKRKNGAMMSRQNSSTTFCTEEESNCADQDGGGEDS---SSKEDDPSKALNLNGKTRASR 270
Query: 148 GQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
G ATD SL R RR +INERLR LQ++VP K + ++ ML+E ++YV+ LQ Q++ LS
Sbjct: 271 GAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQIKLLS 329
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 12/110 (10%)
Query: 109 VSEIETNKRKKNSGRRKRVKGNEKEE---------EKSKEV-VHVRARRGQATDSHSLAE 158
VSE E +R + RKR KG E ++ + SK+V +R +A + H+L+E
Sbjct: 256 VSETEPVQRTTSLEDRKR-KGKETDDSDYLCYSTLKGSKQVRGSTSTKRSRAAEVHNLSE 314
Query: 159 RVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
R RR +INE+++ LQ+++P C K + MLDE I Y+++LQ QV+ +SM
Sbjct: 315 RRRRDRINEKMKALQELIPRCNKADKAS-MLDEAIEYLKTLQLQVQMMSM 363
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 131 EKEEEKSKEVVHVRA----RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMT 186
E+E +K+ RA +R +A + H+L+ER RR +INE++R LQ+++P C K +
Sbjct: 435 EEESVGAKKQAPARAGNGSKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKA 493
Query: 187 MMLDEIINYVQSLQNQVEFLSM 208
MLDE I Y+++LQ QV+ +SM
Sbjct: 494 SMLDEAIEYLKTLQLQVQIMSM 515
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 91 KNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEV---VHVRARR 147
K RK + N ++ +E E+N ++ G + KE++ SK + RA R
Sbjct: 211 KKRKNGAMMSRQNSSTTFCTEEESNCADQDGGGEDS---SSKEDDPSKALNLNGKTRASR 267
Query: 148 GQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
G ATD SL R RR +INERLR LQ++VP K + ++ ML+E ++YV+ LQ Q++ LS
Sbjct: 268 GAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQIKLLS 326
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 91 KNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEV---VHVRARR 147
K RK + N ++ +E E+N ++ G + KE++ SK + RA R
Sbjct: 214 KKRKNGAMMSRQNSSTTFCTEEESNCADQDGGGEDS---SSKEDDPSKALNLNGKTRASR 270
Query: 148 GQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
G ATD SL R RR +INERLR LQ++VP K + ++ ML+E ++YV+ LQ Q++ LS
Sbjct: 271 GAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQIKLLS 329
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD ++Y++ LQ Q
Sbjct: 303 IRAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQKQ 362
Query: 203 VEFLSMKLTAASTFYDFNSESDAV 226
+ LS K SE+D V
Sbjct: 363 FKTLSDKRAKCKCINMQKSEADRV 386
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD SL R RR KINERLR LQ++VP K + ++ ML++ I+YV+ LQ Q
Sbjct: 184 ARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTK-VDISTMLEDAIHYVKFLQLQ 242
Query: 203 VEFLS 207
++ LS
Sbjct: 243 IKLLS 247
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%)
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
VRA+RG AT S+AERVRR +I++R+R LQ++VP K MLDE + YV+ LQ
Sbjct: 169 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQR 228
Query: 202 QVEFLS 207
Q++ L+
Sbjct: 229 QIQELT 234
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AERVRR KI+ER+R LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 194 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 253
Query: 203 VEFL 206
V+ L
Sbjct: 254 VKAL 257
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AERVRR +I+ER+R LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 285 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 344
Query: 203 VEFL 206
+ L
Sbjct: 345 YKIL 348
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 66/109 (60%), Gaps = 6/109 (5%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT +MLDEI++YV+ L+ Q
Sbjct: 123 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAVMLDEIVDYVKFLRLQ 181
Query: 203 VEFLSM-KLTAASTFYDFNSESDAVETMQKAKAYK----AKEMERLMKE 246
V+ LSM +L A + + + K++ +LM+E
Sbjct: 182 VKVLSMSRLGGAGAVAPLEEGGEGGRNQPAWEKWSNDGTEKQVAKLMEE 230
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD ++Y++ LQ Q
Sbjct: 297 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 356
Query: 203 VEFL 206
V+ L
Sbjct: 357 VKVL 360
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 73/124 (58%), Gaps = 12/124 (9%)
Query: 94 KAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRA-------- 145
KAV I +++ SS V + ET + + + K++E+ + +V ++
Sbjct: 1078 KAVAI-DTAGTSSSGVCKAETEPVRIQPETETEIAEDRKQKEREETIVEIQGTEEARGST 1136
Query: 146 --RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
+R +A + H+LAER RR KINE+++ LQ+++P C K+ ++ L+++I Y++SLQ Q+
Sbjct: 1137 SRKRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVS-TLEDVIEYMKSLQMQI 1195
Query: 204 EFLS 207
+ +S
Sbjct: 1196 QMMS 1199
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 108 PVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINE 167
P +E + ++ R + + G + EE R+R A + H+LAER RR KINE
Sbjct: 1534 PATETDIADGRERKEREETIAGIQGTEEARGSTSRKRSR---AAEMHNLAERRRREKINE 1590
Query: 168 RLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
+++ LQ+++P C K+ ++ L+++I YV+SL+ Q++ M
Sbjct: 1591 KMKTLQELIPRCNKSTKVS-TLEDVIEYVKSLEMQIQHYVM 1630
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R +A + H+LAER RR KINE+++ LQ+++P C K+ ++ LD I YV+ LQ+Q++
Sbjct: 135 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVS-TLDAAIEYVKWLQSQIQM 193
Query: 206 LSM 208
+ M
Sbjct: 194 ILM 196
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 94 KAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDS 153
KAV I E++ SS V + ET + ++G E+ + +R + +
Sbjct: 536 KAVVI-ETAETPSSGVCKAETEPVQIQPATIVEIQGTEEARGS------MSRKRSRTAEM 588
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
H+LAER RR KINE ++ LQ+++P C K+ ++ LD+ I YV+ LQ+Q++ +S
Sbjct: 589 HNLAERRRREKINENIKTLQELIPRCNKSTKVS-TLDDAIEYVKWLQSQIQMMS 641
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 288 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 347
Query: 203 VE 204
V+
Sbjct: 348 VK 349
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARR +A + H+L+ER RR +INE++R LQ+++P C KT + MLDE I Y++SLQ Q++
Sbjct: 295 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKAS-MLDEAIEYLKSLQLQLQ 353
Query: 205 FLSM 208
+ M
Sbjct: 354 MMWM 357
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM- 208
ATD HS+AER+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ QV+ LSM
Sbjct: 220 ATDPHSIAERLRRERIAERMKSLQELVPNANKTDKAS-MLDEIIDYVKFLQLQVKVLSMS 278
Query: 209 KLTAASTF 216
+L A+
Sbjct: 279 RLGGAAGM 286
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 5/73 (6%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R + + H+L+ER RR +INE++R LQ+++P C K + MLDE I Y++SLQ QV+
Sbjct: 339 SKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 397
Query: 205 FLSMKLTAASTFY 217
+SM AS +Y
Sbjct: 398 IMSM----ASGYY 406
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 131 EKEEEKSKEVVHVRA----RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMT 186
E+E K+ R +R +A + H+L+ER RR +INE++R LQ+++P C K +
Sbjct: 443 EEESVGGKKAAPARGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKA 501
Query: 187 MMLDEIINYVQSLQNQVEFLSM 208
MLDE I Y+++LQ QV+ +SM
Sbjct: 502 SMLDEAIEYLKTLQLQVQIMSM 523
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARR ++ + H+ +ER RR KINE+L+ LQ+++P C KT ++ MLDE I+Y++SLQ Q++
Sbjct: 14 ARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVS-MLDEAIDYLKSLQLQLQ 72
Query: 205 FLSM 208
L M
Sbjct: 73 MLVM 76
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INE+LR LQ++VP C KT + +LDE I Y++SLQ QV+
Sbjct: 226 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKAS-ILDEAIEYLKSLQMQVQI 284
Query: 206 LSM 208
+ M
Sbjct: 285 MWM 287
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INE+LR LQ++VP C KT + +LDE I Y++SLQ QV+
Sbjct: 325 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKAS-ILDEAIEYLKSLQMQVQI 383
Query: 206 LSM 208
+ M
Sbjct: 384 MWM 386
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AERVRR +I++R+R LQ++VP K ML+E + YV+ LQ Q
Sbjct: 168 VRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQ 227
Query: 203 VEFLS 207
++ L+
Sbjct: 228 IQELT 232
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR ++ D H+ +ER RR +INE+LR LQ+++P C KT ++ MLDE I+Y++SLQ Q++
Sbjct: 16 RRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVS-MLDEAIDYLKSLQLQLQM 74
Query: 206 LSM 208
L M
Sbjct: 75 LVM 77
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INE+LR LQ++VP C KT + +LDE I Y++SLQ QV+
Sbjct: 225 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKAS-ILDEAIEYLKSLQMQVQI 283
Query: 206 LSM 208
+ M
Sbjct: 284 MWM 286
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 362 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 421
Query: 203 VE 204
V+
Sbjct: 422 VK 423
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARR +A + H+L+ER RR +INE+++ LQ+++P C KT + MLDE I Y+++LQ QV+
Sbjct: 262 ARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKAS-MLDEAIEYLKTLQMQVQ 320
Query: 205 FLSM 208
+ M
Sbjct: 321 MMWM 324
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 23/160 (14%)
Query: 61 GNLAENFPGNFIQNNMLPVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKN 120
GNL + P N NNM P + E + RKA E + ++ S +
Sbjct: 91 GNLQQERPSN---NNMTP-------PQKEVETRKASEAAGATATSSVCSGNGAGTGKDDE 140
Query: 121 SGRRKRVKGNEKE------EEKSKEVVHVR------ARRGQATDSHSLAERVRRGKINER 168
S R+++ K + E ++ E +R A+R + + H+L+ER RR +INE+
Sbjct: 141 SWRQQKRKTLQAECSASQDDDPDDESGGMRRSCSRGAKRSRTAEVHNLSERRRRDRINEK 200
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
+R LQ+++P C K + MLDE I Y+++LQ QV+ +SM
Sbjct: 201 MRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMSM 239
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
H RR +A + H+L+ER RR +INE++R LQ+++P C KT + +LDE I Y++SLQ
Sbjct: 223 HGPKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKAS-ILDETIEYLKSLQM 281
Query: 202 QVEFLSMKLTAASTFY 217
QV+ + M A +
Sbjct: 282 QVQIMWMTSGMAPMMF 297
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR KI+ER+R LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 324 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 383
Query: 203 VEFL 206
V+ +
Sbjct: 384 VKVM 387
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+ER RR +INE++R LQ+++P C K + MLDE I Y+++LQ QV+
Sbjct: 443 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 501
Query: 205 FLSM 208
+SM
Sbjct: 502 IMSM 505
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD ++Y++ LQ Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 203 VEFL 206
V+ L
Sbjct: 129 VKGL 132
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Query: 104 EDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRA----RRGQATDSHSLAER 159
E + P ++ KRK + + + E E + +R +R +A + H+L+ER
Sbjct: 267 EPACPKLAVDDRKRKGRALDDTECQSEDVEYESADPKKQLRGSTSTKRSRAAEVHNLSER 326
Query: 160 VRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
RR +INE+++ LQ+++P C KT + MLDE I Y+++LQ QV+ +SM
Sbjct: 327 RRRDRINEKMKALQELIPRCNKTDKAS-MLDEAIEYLKTLQLQVQMMSM 374
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 188
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 189 VKVLSM 194
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+ER RR +INE++R LQ+++P C K + MLDE I Y+++LQ QV+
Sbjct: 367 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 425
Query: 205 FLSM 208
+SM
Sbjct: 426 IMSM 429
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 188
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 189 VKVLSM 194
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD SL R RR +INERLR LQ++VP K + ++ ML+E ++YV+ LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 345
Query: 203 VEFLS 207
++ LS
Sbjct: 346 IKLLS 350
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+ER RR +INE++R LQ+++P C K + MLDE I Y+++LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 516
Query: 205 FLSM 208
+SM
Sbjct: 517 IMSM 520
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AERVRR +I++R+R LQ++VP K ML+E + YV++LQ+Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 203 VEFLS 207
++ L+
Sbjct: 241 IQELT 245
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INE+LR LQ++VP C KT + +LDE I Y++SLQ QV+
Sbjct: 222 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKAS-ILDEAIEYLKSLQMQVQI 280
Query: 206 LSM 208
+ M
Sbjct: 281 MWM 283
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD ++Y++ LQ Q
Sbjct: 322 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 381
Query: 203 VEFL 206
V+ L
Sbjct: 382 VKGL 385
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 203 VEFL 206
+ L
Sbjct: 339 YKIL 342
>gi|242096368|ref|XP_002438674.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
gi|241916897|gb|EER90041.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
Length = 154
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNS 221
+ L+++VPGC K G ++LDEIIN+VQSLQ QVE+LSM+L A + DF
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGG 53
>gi|226493556|ref|NP_001141213.1| uncharacterized protein LOC100273300 [Zea mays]
gi|194703300|gb|ACF85734.1| unknown [Zea mays]
gi|223946721|gb|ACN27444.1| unknown [Zea mays]
Length = 154
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNS 221
+ L+++VPGC K G ++LDEIIN+VQSLQ QVE+LSM+L A + DF
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGG 53
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 120 NSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGC 179
N G KG+ K RA RG ATD SL R RR +INERLR LQ++VP
Sbjct: 268 NGGXTSESKGSAALNSNGK----TRASRGSATDPQSLYARKRRERINERLRILQNLVPNG 323
Query: 180 YKTMGMTMMLDEIINYVQSLQNQVEFLS 207
K + ++ ML+E ++YV+ LQ Q++ LS
Sbjct: 324 TK-VDISTMLEEAVHYVKFLQLQIKLLS 350
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 203 VEFL 206
+ L
Sbjct: 339 YKIL 342
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+ER RR +INE++R LQ+++P C K + MLDE I Y+++LQ QV+
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 522
Query: 205 FLSM 208
+SM
Sbjct: 523 MMSM 526
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 120 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 178
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 179 VKVLSM 184
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD SL R RR +INERLR LQ++VP K + ++ ML+E +NYV+ LQ Q
Sbjct: 274 TRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTK-VDISTMLEEAVNYVKFLQTQ 332
Query: 203 VEFLSM 208
++ ++
Sbjct: 333 IKVCTI 338
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 359
Query: 203 VEFL 206
+ L
Sbjct: 360 YKIL 363
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 71/114 (62%), Gaps = 11/114 (9%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT M+DEI++YV+ L+ Q
Sbjct: 139 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 197
Query: 203 VEFLSM-KLTAASTFYDFNSE---SDAVETMQKAKAYKA------KEMERLMKE 246
V+ LSM +L A +E S +VE +A K +++ +LM+E
Sbjct: 198 VKVLSMSRLGGAGAVAPLVTEMPLSSSVEDETQAVWEKWSNDGTERQVAKLMEE 251
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 123 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 181
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 182 VKVLSM 187
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INE+LR LQ++VP C KT +LDE I Y++SLQ QV+
Sbjct: 401 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKASILDEAIEYLKSLQMQVQI 459
Query: 206 LSM 208
+ M
Sbjct: 460 MWM 462
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 71/114 (62%), Gaps = 11/114 (9%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT M+DEI++YV+ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 202
Query: 203 VEFLSM-KLTAASTFYDFNSE---SDAVETMQKAKAYKA------KEMERLMKE 246
V+ LSM +L A +E S +VE +A K +++ +LM+E
Sbjct: 203 VKVLSMSRLGGAGAVAPLVTEMPLSSSVEDETQAVWEKWSNDGTERQVAKLMEE 256
>gi|51090923|dbj|BAD35528.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|51090957|dbj|BAD35560.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|215678579|dbj|BAG92234.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 154
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 169 LRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNS 221
+ L+++VPGC K G ++LDEIIN+VQSLQ QVE+LSM+L A + DF
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGG 53
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 127 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 185
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 186 VKVLSM 191
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD ++Y++ LQ Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 377
Query: 203 VEFL 206
V+ L
Sbjct: 378 VKGL 381
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 140 VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSL 199
+ VRA+RG AT S+AERVRR +I++R+R LQ++VP K ML+E + YV+ L
Sbjct: 180 LCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFL 239
Query: 200 QNQVEFLS 207
Q Q++ L+
Sbjct: 240 QKQIQELT 247
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AERVRR +I++R+R LQ++VP K ML+E + YV+ LQ Q
Sbjct: 84 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQKQ 143
Query: 203 VEFL 206
+E L
Sbjct: 144 IEEL 147
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AERVRR +I++R+R LQ++VP K ML+E + YV++LQ Q
Sbjct: 178 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQ 237
Query: 203 VEFLS 207
++ L+
Sbjct: 238 IQELT 242
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 137 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 195
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 196 VKVLSM 201
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I++R+R LQ++VP K ML+E ++YV+ LQ Q
Sbjct: 188 IRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQ 247
Query: 203 VEFLS 207
++ L+
Sbjct: 248 IQELT 252
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 99 SESSNEDSSPV--SEIETNKRKKNSGRRKRVKG----NEKEEEKSKEVVHVRARRGQATD 152
++ ED PV + T +K+ + V+G KE K+ +RR +
Sbjct: 124 ADDGQEDGVPVMGTSTTTADKKEKAPTTTTVEGMMIMGNKEMRKAP-AGGGSSRRSHHGE 182
Query: 153 SHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
+H+L E+ RR KINER + LQ IVPGC K+ LD+ I+Y++SLQ+QV+ +S
Sbjct: 183 AHNLTEKRRRHKINERFKTLQQIVPGCSKS-NQASTLDQTIHYMKSLQHQVQAMS 236
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+ER RR +INE++R LQ+++P C K + MLDE I Y+++LQ QV+
Sbjct: 322 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 380
Query: 205 FLSM 208
+SM
Sbjct: 381 IMSM 384
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 138 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 196
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 197 VKILSM 202
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD ++Y++ LQ Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 330
Query: 203 VEFLS 207
+ LS
Sbjct: 331 YKTLS 335
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 135 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 193
Query: 203 VEFLSM-KLTAASTF 216
V+ LSM +L A
Sbjct: 194 VKVLSMSRLGGAGAV 208
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 131 EKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLD 190
E E K + +R A + H+L+ER RR +INE+++ LQ+++P C K+ + MLD
Sbjct: 258 ESPEAKKQVRGSTSTKRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKAS-MLD 316
Query: 191 EIINYVQSLQNQVEFLSM 208
E I Y++SLQ QV+ +SM
Sbjct: 317 EAIEYLKSLQLQVQMMSM 334
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
VRA+RG AT S+AERVRR +I++R+R LQ++VP K ML+E + YV+ LQ
Sbjct: 185 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQR 244
Query: 202 QVEFLS 207
Q++ L+
Sbjct: 245 QIQELT 250
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 131 EKEEEKSKEVVHVRA--RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMM 188
EK E SK V R+ +R +A + H+L+E+ RR +INE+++ LQ+++P KT + M
Sbjct: 105 EKSVEASKPVPPPRSSSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS-M 163
Query: 189 LDEIINYVQSLQNQVEFL 206
LDE I Y++ LQ QV++L
Sbjct: 164 LDEAIEYLKQLQLQVQYL 181
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD + Y++ LQ Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 359
Query: 203 VEFLSMK 209
+ LS K
Sbjct: 360 FKTLSEK 366
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AER RR +I++RLR LQD+VP K + MLD ++Y++ LQ+Q
Sbjct: 300 VRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 359
Query: 203 VEFL 206
+E L
Sbjct: 360 IEKL 363
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INE++R LQ+++P C KT + MLDE I Y++SLQ Q++
Sbjct: 31 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKAS-MLDEAIEYLKSLQLQLQV 89
Query: 206 LSM 208
+ M
Sbjct: 90 MWM 92
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA RG ATD SL R RR +INERLR LQ +VP K + ++ ML+E + YV+ LQ Q+
Sbjct: 185 RASRGSATDPQSLYARKRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKFLQLQI 243
Query: 204 EFLS 207
+ LS
Sbjct: 244 KLLS 247
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 129 GNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMM 188
G+ K E RA RG ATD SL R RR +INERLR LQ++VP K + ++ M
Sbjct: 223 GDSKVSEALNSKGKARAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTM 281
Query: 189 LDEIINYVQSLQNQVEFLS 207
L+E + YV+ LQ Q++ LS
Sbjct: 282 LEEAVQYVKFLQLQIKLLS 300
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
VRA+RG AT S+AERVRR +I++R+R LQ++VP K ML+E + YV+ LQ
Sbjct: 183 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQR 242
Query: 202 QVEFLS 207
Q++ L+
Sbjct: 243 QIQELT 248
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR ++ D H+ +ER RR +INE+L+ LQ+++P C KT ++ MLDE I+Y++SLQ Q++
Sbjct: 17 RRSRSADFHNFSERRRRDRINEKLKALQELLPNCTKTDKVS-MLDEAIDYLKSLQLQLQM 75
Query: 206 LSM 208
L M
Sbjct: 76 LVM 78
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA RG ATD SL R RR +INERLR LQ++VP K + ++ ML+E ++YV+ LQ Q+
Sbjct: 94 RASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQI 152
Query: 204 EFLS 207
+ LS
Sbjct: 153 KLLS 156
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD ++Y++ LQ Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 359
Query: 203 VEFL 206
V+ +
Sbjct: 360 VKVI 363
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 12/109 (11%)
Query: 108 PVSEIETNKRKKNSGRRKRVKGNEKE----EEKSKEVVHVR----ARRGQATDSHSLAER 159
P + KRK GR + + E EE S+E R RR +A + H+L+ER
Sbjct: 278 PSDSVHVQKRK---GRCRDDSDSPSEDAECEEASEETKPSRRYGTKRRTRAAEVHNLSER 334
Query: 160 VRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
RR +INE++R LQ+++P C KT + +LDE I Y++SLQ QV+ + M
Sbjct: 335 RRRDRINEKMRALQELIPHCNKTDKAS-ILDETIEYLKSLQMQVQIMWM 382
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 94 KAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDS 153
KAV + E++ SS V + ET + ++K E+ + +R + +
Sbjct: 201 KAVAV-EAAGTPSSGVCKAETEPVQIQPATESKLKAREETHGTEEARGSTSRKRSRTAEM 259
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE-FLSMKLTA 212
H+LAER RR KINE+++ LQ ++P C K+ ++ LD+ I YV+SLQ+Q++ +S + A
Sbjct: 260 HNLAERRRREKINEKMKTLQQLIPRCNKSTKVS-TLDDAIEYVKSLQSQIQGMMSPMMNA 318
Query: 213 AST 215
+T
Sbjct: 319 GNT 321
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AER RR +I++RLR LQD+VP K + MLD ++Y++ LQ+Q
Sbjct: 295 VRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 354
Query: 203 VEFL 206
+E L
Sbjct: 355 IEKL 358
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA RG ATD SL R RR +INERLR LQ +VP K + ++ ML+E ++YV+ LQ Q+
Sbjct: 238 RASRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQLQI 296
Query: 204 EFLS 207
+ LS
Sbjct: 297 KLLS 300
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD + Y++ LQ Q
Sbjct: 294 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEYIKDLQKQ 353
Query: 203 VEFLSMK 209
+ LS K
Sbjct: 354 FKTLSEK 360
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT M+DEI++YV+ L+ Q
Sbjct: 150 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSKT-DRAAMIDEIVDYVKFLRLQ 208
Query: 203 VEFLSM-KLTAASTFYDFNSE 222
V+ LSM +L A +E
Sbjct: 209 VKVLSMSRLGGAGAVAPLVTE 229
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD ++Y++ LQ Q
Sbjct: 307 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 366
Query: 203 VEFL 206
V+ +
Sbjct: 367 VKVI 370
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT M+DEI++YV+ L+ Q
Sbjct: 148 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 206
Query: 203 VEFLSM-KLTAASTFYDFNSE 222
V+ LSM +L A +E
Sbjct: 207 VKVLSMSRLGGAGAVAPLVTE 227
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQD+ P K MLD + Y++ LQ Q
Sbjct: 350 IRAKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQ 409
Query: 203 VEFL 206
V+ L
Sbjct: 410 VKTL 413
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 129 GN-EKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTM 187
GN E S + + RA RG ATD SL R RR +INERLR LQ +VP K + ++
Sbjct: 175 GNFEGNTNSSTKKAYTRASRGAATDPQSLYARKRRERINERLRILQKLVPNGTK-VDIST 233
Query: 188 MLDEIINYVQSLQNQVEFLS 207
ML+E YV+ LQ Q++ LS
Sbjct: 234 MLEEAAQYVKFLQLQIKLLS 253
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ Q
Sbjct: 154 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 212
Query: 203 VEFLSM-KLTAASTF 216
V+ LSM +L A
Sbjct: 213 VKVLSMSRLGGAGAV 227
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD SL R RR +INERLR LQ +VP K + ++ ML+E + YV+ LQ Q
Sbjct: 264 TRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKFLQLQ 322
Query: 203 VEFLS 207
++ LS
Sbjct: 323 IKLLS 327
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R +A + H+L+E+ RR KINE+++ LQ ++P KT + MLDE I Y++ LQ QV+
Sbjct: 102 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQM 160
Query: 206 LSMKLTAASTFYDFNSESDAVETMQKAKAYKAKEMERLMKEGNFACSSSSSFL 258
LSM+ + + S +E Q ++ + A + GN SSS + +
Sbjct: 161 LSMR---NGVYLNPPYLSGTIEPAQASQMFAA------VGGGNITASSSGAVM 204
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD S+ R RR +INERLR LQ++VP K + ++ ML+E ++YV+ LQ Q
Sbjct: 207 TRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 265
Query: 203 VEFLS 207
++ LS
Sbjct: 266 IKLLS 270
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER++ LQD+ P K MLD + Y++ LQ +
Sbjct: 366 IRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVEYIKDLQQK 425
Query: 203 VEFLS 207
V+ LS
Sbjct: 426 VKILS 430
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA RG ATD SL R RR +INERLR LQ +VP K + ++ ML+E + YV+ LQ Q+
Sbjct: 248 RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTK-VDISTMLEEAVQYVKFLQLQI 306
Query: 204 EFLS 207
+ LS
Sbjct: 307 KLLS 310
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMK 209
A + H+L+E+ RR KINE+++ LQ ++P KT + MLDE I Y++ LQ QV+ LSM+
Sbjct: 84 AAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQMLSMR 142
Query: 210 LTAASTFYDFNSESDAVETMQKAKAYKAKEMERLMKEGNFACSSSSSFL 258
+ + S A+E Q ++ + A + GN SSS + +
Sbjct: 143 ---NGVYLNPPYLSGAIEPAQASQMFAA------LGGGNITASSSGAVM 182
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RG ATD S+ R RR +INERL+ LQ +VP K + + ML+E I+YV+ LQ QV
Sbjct: 212 RAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAK-VDIVTMLEEAIHYVKFLQLQV 270
Query: 204 EFLSMK--LTAASTFYD 218
LS T A T Y+
Sbjct: 271 NMLSSDEYWTYAPTTYN 287
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD ++Y++ LQ Q
Sbjct: 30 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 89
Query: 203 VEFLS 207
+ LS
Sbjct: 90 YKTLS 94
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+++ER RR +INE++R LQ++VP C KT + +LDE I Y++SLQ QV+
Sbjct: 245 RRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNKTDKAS-ILDEAIEYLKSLQMQVQI 303
Query: 206 LSM 208
+ M
Sbjct: 304 MWM 306
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 58/93 (62%), Gaps = 4/93 (4%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+E+ RR KINE+++ LQ ++P KT + MLDE I Y++ LQ QV+
Sbjct: 22 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQ 80
Query: 205 FLSMKLTAASTFYDFNSESDAVETMQKAKAYKA 237
LSM+ + + + S A+E Q ++ + A
Sbjct: 81 MLSMR---NGVYLNPSYLSGALEPAQASQMFAA 110
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
RR ++ + H+ +ER RR KINE+L+ LQ+++P C KT ++ MLDE I+Y++SLQ Q++
Sbjct: 14 TRRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVS-MLDEAIDYLKSLQLQLQ 72
Query: 205 FLSM 208
L M
Sbjct: 73 MLVM 76
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD SL R RR +INERLR LQ +VP K + ++ ML+E ++YV+ LQ Q
Sbjct: 237 TRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQLQ 295
Query: 203 VEFLS 207
++ LS
Sbjct: 296 IKLLS 300
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD SL R RR +INERLR LQ +VP K + ++ ML+E ++YV+ LQ Q
Sbjct: 237 TRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQLQ 295
Query: 203 VEFLS 207
++ LS
Sbjct: 296 IKLLS 300
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 60/103 (58%), Gaps = 11/103 (10%)
Query: 125 KRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMG 184
R++G E+ + +R +A + H+LAER RR KINER++ LQ ++P C K+
Sbjct: 132 PRIQGTEEARGSTSR------KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTK 185
Query: 185 MTMMLDEIINYVQSLQNQV----EFLSMKLTAASTFYDFNSES 223
++ ML+++I YV+SL+ Q+ ++M + + F S++
Sbjct: 186 VS-MLEDVIEYVKSLEMQINQFMPHMAMGMNQPPAYIPFPSQA 227
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+E+ RR +INE+++ LQ ++P KT + MLDE I Y++ LQ QV+
Sbjct: 102 SKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQ 160
Query: 205 FLSMKLTAASTFYDFNSESDAVETMQKAKAYKA 237
LSM+ + + + S A+E MQ ++ + A
Sbjct: 161 MLSMR---NGVYLNPSYLSGALEPMQASQMFAA 190
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD SL R RR +INERL+ LQ++VP K + ++ ML+E ++YV LQ Q
Sbjct: 272 TRATRGAATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVHYVNFLQLQ 330
Query: 203 VEFLS 207
++ LS
Sbjct: 331 IKLLS 335
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA +G ATD SL R RR +INERLR LQ++VP K + ++ ML+E + YV+ LQ Q
Sbjct: 224 TRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQ 282
Query: 203 VEFLS 207
++ LS
Sbjct: 283 IKLLS 287
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA RG ATD SL R RR +INERL+ LQ++VP K + ++ ML+E ++YV+ LQ Q+
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQI 275
Query: 204 EFLS 207
+ LS
Sbjct: 276 KLLS 279
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 16/118 (13%)
Query: 101 SSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKE----------EEKSKEVVHVRARRGQA 150
SS+E+ PV ++ RK RK ++ E E E K + +R +A
Sbjct: 205 SSSEEPEPVGKVAEQDRK-----RKGIEAEEWEYQSEDVDFESAEAKKNISGSSTKRSRA 259
Query: 151 TDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
+ H+L+ER RR +INE+++ LQ+++P K+ + MLDE I+Y++SLQ QV+ + +
Sbjct: 260 AEVHNLSERRRRDRINEKMKALQELIPRSNKSDKAS-MLDEAIDYLKSLQLQVQRVQL 316
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 204
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 204
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD SL R RR +INERLR LQ +VP K + ++ ML+E + YV+ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VDISTMLEEAVQYVKFLQLQ 295
Query: 203 VEFLS 207
++ LS
Sbjct: 296 IKLLS 300
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 204
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
RR ++ + H+ +ER RR +INE+L+ LQ+++P C KT ++ MLDE I+Y++SLQ Q++
Sbjct: 15 TRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVS-MLDEAIDYLKSLQLQLQ 73
Query: 205 FLSM 208
L M
Sbjct: 74 MLVM 77
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRG AT S+AER RR +I++RL+ LQD+VP K + MLD ++Y++ L++Q
Sbjct: 280 VRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDQ 339
Query: 203 VEFL 206
VE L
Sbjct: 340 VEKL 343
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 204
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD SL R RR +INERLR LQ +VP K + ++ ML+E + YV+ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VHISTMLEEAVQYVKFLQLQ 295
Query: 203 VEFLS 207
++ LS
Sbjct: 296 IKLLS 300
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD + Y++ LQ Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQKQ 330
Query: 203 VEFLS 207
+ LS
Sbjct: 331 YKTLS 335
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R + + H+L+ER RR +INE++R LQ+++P C K + MLDE I Y+++LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 367
Query: 206 LSM 208
+SM
Sbjct: 368 MSM 370
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD SL R RR +INERLR LQ +VP K + ++ ML+E + YV+ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VDISTMLEEAVQYVKFLQLQ 295
Query: 203 VEFLS 207
++ LS
Sbjct: 296 IKLLS 300
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R + + H+L+ER RR +INE++R LQ+++P C K + MLDE I Y+++LQ QV+
Sbjct: 381 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 439
Query: 206 LSM 208
+SM
Sbjct: 440 MSM 442
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Query: 108 PVSEIE-TNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKIN 166
P +E + T++RK+ + V+ EE + ++R +A H L+ER RR KIN
Sbjct: 239 PATETDITDERKRKTREETNVENQGTEEARDS----TSSKRSRAAIMHKLSERRRRQKIN 294
Query: 167 ERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKL 210
E ++ LQ+++P C KT + MLD++I YV+SLQ+Q++ +++
Sbjct: 295 EMMKALQELLPRCTKT-DRSSMLDDVIEYVKSLQSQIQGKHLRI 337
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
VRA+RG AT S+AERVRR +I++R+R LQ++VP K ML+E + YV+ LQ
Sbjct: 174 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 233
Query: 202 QVEFLS 207
+++ LS
Sbjct: 234 KIQELS 239
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R + + H+L+ER RR +INE++R LQ+++P C K + MLDE I Y+++LQ QV+
Sbjct: 402 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 460
Query: 206 LSM 208
+SM
Sbjct: 461 MSM 463
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 133 EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEI 192
E E+ R +R +A + H+L+E+ RR +INE+++ LQ ++P KT + MLD+
Sbjct: 16 ESEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKAS-MLDDA 74
Query: 193 INYVQSLQNQVEFLSMK 209
I Y++ LQ QV+ LSM+
Sbjct: 75 IEYLKQLQLQVQMLSMR 91
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA +G ATD SL R RR KINERL+ LQ++VP K + ++ ML+E ++YV+ LQ Q
Sbjct: 167 TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 225
Query: 203 VEFLS 207
++ LS
Sbjct: 226 IKLLS 230
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 204
Query: 203 VEFLSM 208
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA +G ATD SL R RR KINERL+ LQ++VP K + ++ ML+E ++YV+ LQ Q
Sbjct: 167 TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 225
Query: 203 VEFLS 207
++ LS
Sbjct: 226 IKLLS 230
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R + + H+L+ER RR +INE++R LQ+++P C K + MLDE I Y+++LQ QV+
Sbjct: 437 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 495
Query: 206 LSM 208
+SM
Sbjct: 496 MSM 498
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT M+DEI++YV+ L+ Q
Sbjct: 83 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 141
Query: 203 VEFLSM-KLTAASTF 216
V+ LSM +L A
Sbjct: 142 VKVLSMSRLGGAGAV 156
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++ P K MLD + Y++ LQ Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 392
Query: 203 VEFL 206
V+ L
Sbjct: 393 VKTL 396
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R + + H+L+ER RR +INE++R LQ+++P C K + MLDE I Y+++LQ QV+
Sbjct: 449 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 507
Query: 206 LSM 208
+SM
Sbjct: 508 MSM 510
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
VRA+RG AT S+AERVRR +I++R+R LQ++VP K ML+E + YV+ LQ
Sbjct: 104 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 163
Query: 202 QVEFLS 207
+++ LS
Sbjct: 164 KIQELS 169
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RAR+G A D S+A RVRR +I+ERL+ LQ ++P K + M ML++ I+YVQ L+ Q+
Sbjct: 640 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAISYVQCLEFQI 698
Query: 204 EFL 206
+ L
Sbjct: 699 KML 701
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
R +R +A + H+L+E+ RR KINE+++ LQ +VP KT + MLD+ I Y++ LQ QV
Sbjct: 45 RGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSKTDKAS-MLDDAIEYLKHLQLQV 103
Query: 204 EFLSMK 209
+ LSM+
Sbjct: 104 QMLSMR 109
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD SL R RR +INERL+ LQ++VP K + ++ ML+E + YV+ LQ Q
Sbjct: 255 ARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQLQ 313
Query: 203 VEFLS 207
++ LS
Sbjct: 314 IKLLS 318
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD SL R RR +INERL+ LQ++VP K + ++ ML+E + YV+ LQ Q
Sbjct: 254 ARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQLQ 312
Query: 203 VEFLS 207
++ LS
Sbjct: 313 IKLLS 317
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 119 KNSGRRKRVKGN-EKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVP 177
++SG +GN E S + RA RG ATD SL R RR +INERLR LQ++VP
Sbjct: 171 QSSGSCTSEEGNFEGNTYSSAKKTCTRASRGGATDPQSLYARKRRERINERLRILQNLVP 230
Query: 178 GCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
K + ++ ML+E YV+ LQ Q++ LS
Sbjct: 231 NGTK-VDISTMLEEAAQYVKFLQLQIKLLS 259
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RG ATD S+ R RR +INERLR LQ +VP K + + ML+E INYV+ LQ Q+
Sbjct: 238 RAKRGSATDPQSIYARQRRERINERLRALQGLVPNGAK-VDIVTMLEEAINYVKFLQLQL 296
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 132 KEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDE 191
+EEE+ ++R +AT+ H+L+ER RR +IN+++R LQD++P K + ML E
Sbjct: 358 EEEEQVPARGSAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNK-VDKASMLGE 416
Query: 192 IINYVQSLQNQVEFLSM 208
I+Y++SLQ QV+ +SM
Sbjct: 417 AIDYLKSLQLQVQMMSM 433
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 133 EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEI 192
E E+ R +R +A + H+L+E+ RR +INE+++ LQ ++P KT + MLD+
Sbjct: 38 ESEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKAS-MLDDA 96
Query: 193 INYVQSLQNQVEFLSMK 209
I Y++ LQ QV+ LSM+
Sbjct: 97 IEYLKQLQLQVQMLSMR 113
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 133 EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEI 192
EE +K ++R +A + H+L+E+ RR +INE+++ LQ+++P KT + MLDE
Sbjct: 158 EELPTKPNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS-MLDEA 216
Query: 193 INYVQSLQNQVEFLSMK 209
I Y++ LQ QV+ LSM+
Sbjct: 217 IEYLKQLQLQVQMLSMR 233
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
R+ RG ATD SL R RR +INERL+ LQ++VP K + ++ ML+E + YV+ LQ Q+
Sbjct: 225 RSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 283
Query: 204 EFLS 207
+ LS
Sbjct: 284 KLLS 287
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 133 EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEI 192
EE +K ++R +A + H+L+E+ RR +INE+++ LQ+++P KT + MLDE
Sbjct: 158 EELPTKPNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS-MLDEA 216
Query: 193 INYVQSLQNQVEFLSMK 209
I Y++ LQ QV+ LSM+
Sbjct: 217 IEYLKQLQLQVQMLSMR 233
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 133 EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEI 192
E E+ R +R +A + H+L+E+ RR +INE+++ LQ ++P KT + MLD+
Sbjct: 38 ESEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKAS-MLDDA 96
Query: 193 INYVQSLQNQVEFLSMK 209
I Y++ LQ QV+ LSM+
Sbjct: 97 IEYLKQLQLQVQMLSMR 113
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD SL R RR +INERL+ LQ++VP K + ++ ML+E + YV+ LQ Q
Sbjct: 259 ARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQLQ 317
Query: 203 VEFLS 207
++ LS
Sbjct: 318 IKLLS 322
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 132 KEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDE 191
+EEE+ ++R +AT+ H+L+ER RR +IN+++R LQD++P K + ML E
Sbjct: 364 EEEEQVPARGSAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNK-VDKASMLGE 422
Query: 192 IINYVQSLQNQVEFLSM 208
I+Y++SLQ QV+ +SM
Sbjct: 423 AIDYLKSLQLQVQMMSM 439
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%)
Query: 140 VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSL 199
VRARRG AT S+AER RR +I++RL+ LQD+VP K + MLD + Y++ L
Sbjct: 149 ACRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVEYIKEL 208
Query: 200 QNQVEFL 206
++QVE L
Sbjct: 209 KDQVEKL 215
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 131 EKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLD 190
E EE H RR +A + H+ +ER RR +INE++R LQ+++P C K + +LD
Sbjct: 188 EATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKADKAS-ILD 246
Query: 191 EIINYVQSLQNQVEFLSMKLTAASTFY 217
E I Y++SLQ QV+ + M A +
Sbjct: 247 EAIEYLKSLQMQVQVMWMTSGMAPMMF 273
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+RG+ + H+++ER RR +INE++R LQ+++P C K + ML+E I Y+++LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 379
Query: 206 LSMKLTAA 213
+S TA
Sbjct: 380 MSTMGTAG 387
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+RG+ + H+++ER RR +INE++R LQ+++P C K + ML+E I Y+++LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 379
Query: 206 LSMKLTAA 213
+S TA
Sbjct: 380 MSTMGTAG 387
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA+RG AT S+AER RR +I++RL+ LQD+VP K + MLD + Y++ LQ Q
Sbjct: 93 ARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQ 152
Query: 203 VEFL 206
VE L
Sbjct: 153 VEKL 156
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 58/93 (62%), Gaps = 4/93 (4%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+E+ RR KINE+++ LQ ++P KT + MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQ 157
Query: 205 FLSMKLTAASTFYDFNSESDAVETMQKAKAYKA 237
LSM+ + + + S A+E Q ++ + A
Sbjct: 158 MLSMR---NGVYLNPSYLSGALEPAQASQMFAA 187
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 128 KGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTM 187
+G+E K+ ++R +A + H+L+E+ RR KINE+L+ LQ+++P KT +
Sbjct: 70 EGSELPSSKAAPPPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKAS- 128
Query: 188 MLDEIINYVQSLQNQVEFLSMK 209
MLDE I Y++ LQ QV+ L ++
Sbjct: 129 MLDEAIEYLKQLQLQVQMLMVR 150
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 58/93 (62%), Gaps = 4/93 (4%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+E+ RR KINE+++ LQ ++P KT + MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQ 157
Query: 205 FLSMKLTAASTFYDFNSESDAVETMQKAKAYKA 237
LSM+ + + + S A+E Q ++ + A
Sbjct: 158 MLSMR---NGVYLNPSYLSGALEPAQASQMFAA 187
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++ P K MLD + Y++ LQ Q
Sbjct: 171 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 230
Query: 203 VEFL 206
V+ L
Sbjct: 231 VKTL 234
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD + Y++ LQ Q
Sbjct: 321 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 380
Query: 203 VEFLS 207
L+
Sbjct: 381 YNTLT 385
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 131 EKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLD 190
E EE H RR +A + H+ +ER RR +INE++R LQ+++P C K + +LD
Sbjct: 217 EATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKADKAS-ILD 275
Query: 191 EIINYVQSLQNQVEFLSMKLTAASTFY 217
E I Y++SLQ Q++ + M A +
Sbjct: 276 EAIEYLKSLQMQLQIMWMTTGMAPMMF 302
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 15/104 (14%)
Query: 117 RKKNSGRRKRVKGNEKEEEKSKEVVH--------------VRARRGQATDSHSLAERVRR 162
R + +RK+ G E E ++ V A+R +A H+L+ER RR
Sbjct: 191 RPSGASKRKQCDGAESPGEVMQQDVESESADVTCETAQKPATAKRRRAAQVHNLSERRRR 250
Query: 163 GKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
+INE++R LQ++VP C KT + MLDE I Y++SLQ Q++ +
Sbjct: 251 DRINEKMRALQELVPHCNKTDKAS-MLDEAIEYLKSLQLQLQVM 293
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+RG+ + H+++ER RR +INE++R LQ+++P C K + ML+E I Y+++LQ QV+
Sbjct: 325 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 383
Query: 206 LSMKLTAA 213
+S TA
Sbjct: 384 MSTMGTAG 391
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RAR+G A D S+A RVRR +I+ERL+ LQ ++P K + M ML++ I YVQ L+ Q+
Sbjct: 755 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAITYVQCLELQI 813
Query: 204 EFL 206
+ L
Sbjct: 814 KML 816
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R ++ + HSL+E+ RR +IN+++R LQ+++P C K ++ +LDE I+Y+++LQ QV+
Sbjct: 379 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKIS-ILDEAIDYLKTLQLQVQ 437
Query: 205 FLSM 208
+SM
Sbjct: 438 VMSM 441
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD + Y++ LQ Q
Sbjct: 310 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 369
Query: 203 VEFLS 207
L+
Sbjct: 370 YNTLT 374
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RAR+G A D S+A RVRR +I+ERL+ LQ ++P K + M ML++ I YVQ L+ Q+
Sbjct: 49 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAITYVQCLELQI 107
Query: 204 EFL 206
+ L
Sbjct: 108 KML 110
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RAR+G A D S+A RVRR +I+ERL+ LQ ++P K + M ML++ I+YVQ L+ Q+
Sbjct: 823 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAISYVQCLEFQI 881
Query: 204 EFL 206
+ L
Sbjct: 882 KML 884
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 131 EKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLD 190
E EE H RR +A + H+ +ER RR +INE++R LQ+++P C K +LD
Sbjct: 179 EATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKA-DKASILD 237
Query: 191 EIINYVQSLQNQVEFLSMKLTAASTFY 217
E I Y++SLQ QV+ + M A +
Sbjct: 238 EAIEYLKSLQMQVQVMWMTSGMAPMMF 264
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA+RG AT S+AER RR +I++RL+ LQD+VP K + MLD + Y++ LQ Q
Sbjct: 156 ARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQ 215
Query: 203 VEFL 206
VE L
Sbjct: 216 VEKL 219
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA G ATD SL R RR +INERLR LQ++VP K + ++ ML+E + YV+ LQ Q+
Sbjct: 265 RATTGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 323
Query: 204 EFLS 207
+ LS
Sbjct: 324 KLLS 327
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 128 KGNEKEEEKSKEVVHVR--ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM 185
KG E E S E V R ++R +A + H+L+E+ RR +INE+++ LQ+++P KT
Sbjct: 103 KGAEVAEVPS-ETVRPRNSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DK 160
Query: 186 TMMLDEIINYVQSLQNQVEFLSMK 209
MLDE I Y++ LQ QV+ L+M+
Sbjct: 161 ASMLDEAIEYLKQLQLQVQMLTMR 184
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
A+R +A + H+L+ER RR +INE+++ LQ+++P C KT + MLDE I Y++SLQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKAS-MLDEAIEYLKSLQLQLQ 323
Query: 205 FLSM 208
+ M
Sbjct: 324 MMWM 327
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
R+ RG ATD S+ R RR KINERL+ LQ++VP K + ++ ML+E + YV+ LQ Q+
Sbjct: 247 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 305
Query: 204 EFLS 207
+ LS
Sbjct: 306 KLLS 309
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+RG+A + H+L+ER RR +INE++R LQ+++P C K + MLDE I Y+++LQ QV+
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQV 59
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
A+R +A + H+L+ER RR +INE+++ LQ+++P C KT + MLDE I Y++SLQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKAS-MLDEAIEYLKSLQLQLQ 323
Query: 205 FLSM 208
+ M
Sbjct: 324 MMWM 327
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
A+R +A + H+L+ER RR +INE+++ LQ+++P C KT + MLDE I Y++SLQ Q++
Sbjct: 274 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKAS-MLDEAIEYLKSLQLQLQ 332
Query: 205 FLSM 208
+ M
Sbjct: 333 MMWM 336
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 142 HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K + MLDE + Y++ LQ
Sbjct: 24 RLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYMKFLQK 83
Query: 202 QV 203
QV
Sbjct: 84 QV 85
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K MLD + Y++ LQ Q
Sbjct: 196 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 255
Query: 203 VEFLS 207
L+
Sbjct: 256 YNTLT 260
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG +TD SL R RR +INERL+ LQ +VP K + M+ ML+E ++YV+ LQ Q
Sbjct: 215 ARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTK-VDMSTMLEEAVHYVKFLQLQ 273
Query: 203 VEFLS 207
++ LS
Sbjct: 274 IKVLS 278
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA RG ATD SL R RR +INERL+ LQ IVP K + ++ ML+E ++YV+ LQ Q
Sbjct: 270 TRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTK-VDISTMLEEAVHYVKFLQLQ 328
Query: 203 VE 204
++
Sbjct: 329 IK 330
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+R +A + H+L+E+ RR +INE+++ LQ ++P KT + MLDE I Y++ LQ QV+
Sbjct: 159 KRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQM 217
Query: 206 LSMKLTAASTFYDFNSESDAVETMQKAKAYKA 237
LSM+ + + + S A+E +Q ++ + A
Sbjct: 218 LSMR---NGVYLNPSYLSGALEPVQASQMFAA 246
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
R +R +A + H+L+E+ RR +INE+++ LQ ++P KT + MLD+ I Y++ LQ QV
Sbjct: 41 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKAS-MLDDAIEYLKQLQLQV 99
Query: 204 EFLSMK 209
+ LSM+
Sbjct: 100 QMLSMR 105
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 126 RVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM 185
R + ++EE+K+ V +R +A H+ +ER RR KIN+R++ LQ +VP KT
Sbjct: 190 RPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKA 249
Query: 186 TMMLDEIINYVQSLQNQVEFLS 207
+ MLDE+I Y++ LQ QV +S
Sbjct: 250 S-MLDEVIEYLKQLQAQVSMMS 270
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 126 RVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM 185
R + ++EE+K+ V +R +A H+ +ER RR KIN+R++ LQ +VP KT
Sbjct: 190 RPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKA 249
Query: 186 TMMLDEIINYVQSLQNQVEFLS 207
+ MLDE+I Y++ LQ QV +S
Sbjct: 250 S-MLDEVIEYLKQLQAQVSMMS 270
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 6/73 (8%)
Query: 141 VHVRA-----RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINY 195
VH R+ +R + + H+L+ER RR +INE++R LQ+++P C K + ML+E I Y
Sbjct: 322 VHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEY 380
Query: 196 VQSLQNQVEFLSM 208
+++LQ QV+ +SM
Sbjct: 381 LKTLQLQVQMMSM 393
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 6/73 (8%)
Query: 141 VHVRA-----RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINY 195
VH R+ +R + + H+L+ER RR +INE++R LQ+++P C K + ML+E I Y
Sbjct: 106 VHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEY 164
Query: 196 VQSLQNQVEFLSM 208
+++LQ QV+ +SM
Sbjct: 165 LKTLQLQVQMMSM 177
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 6/70 (8%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTM------MLDEIINYV 196
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K++ + MLDE + Y+
Sbjct: 416 LRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVEYM 475
Query: 197 QSLQNQVEFL 206
+ LQ QV+ L
Sbjct: 476 KFLQKQVDDL 485
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
A+R + + H+L+ER RR +INE++R LQ+++P C K + + ML+E I Y+++LQ QV+
Sbjct: 318 AKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKSSMLEEAIEYLKTLQLQVQ 376
Query: 205 FLSM 208
+SM
Sbjct: 377 MMSM 380
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 6/73 (8%)
Query: 141 VHVRA-----RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINY 195
VH R+ +R + + H+L+ER RR +INE++R LQ+++P C K + ML+E I Y
Sbjct: 322 VHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEY 380
Query: 196 VQSLQNQVEFLSM 208
+++LQ QV+ +SM
Sbjct: 381 LKTLQLQVQMMSM 393
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AER RR +I+ER++ LQD+ P K MLD + +++ LQ Q
Sbjct: 361 IRAKRGFATHPRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHIKDLQQQ 420
Query: 203 VEFLS 207
V+ LS
Sbjct: 421 VQILS 425
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 9/110 (8%)
Query: 103 NEDSSPVSEIETNKRKKNSGRRKRVKGNEKEE------EKSKEVVH--VRARRGQATDSH 154
NE P + ++ R++ V + E+ + + E H A+R +A + H
Sbjct: 260 NEHPCPGAAAAAAAAHRSGKRKQSVDATDAEDVEFESADVTCEPAHKTATAKRRRAAEVH 319
Query: 155 SLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
+L+ER RR +INE+++ LQ+++P C KT + MLDE I Y++SLQ Q++
Sbjct: 320 NLSERRRRDRINEKMKALQELIPHCNKTDKAS-MLDEAIEYLKSLQLQLQ 368
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
+RG+ + H+++ER RR +INE++R LQ+++P C K + ML+E I Y+++LQ QV+
Sbjct: 266 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 324
Query: 206 LSMKLTAAST 215
+S AA+
Sbjct: 325 MSSMGPAAAA 334
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA+RG AT S+AER RR +I++RL+ LQD+VP K + MLD + Y++ LQ Q
Sbjct: 309 ARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQ 368
Query: 203 VEFL 206
VE L
Sbjct: 369 VEKL 372
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA+RG AT S+AER RR +I++RL+ LQD+VP K + MLD + Y++ LQ Q
Sbjct: 309 ARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQ 368
Query: 203 VEFL 206
VE L
Sbjct: 369 VEKL 372
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
A+R + + H+++ER RR +INE++R LQ+++P C K + ML+E I Y+++LQ QV+
Sbjct: 257 AKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 315
Query: 205 FLSM 208
+SM
Sbjct: 316 MMSM 319
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I++R++ LQ + P K MLD + Y++ LQ Q
Sbjct: 319 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 378
Query: 203 VEFLS 207
V+ L+
Sbjct: 379 VQILT 383
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I++R++ LQ + P K MLD + Y++ LQ Q
Sbjct: 322 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 381
Query: 203 VEFLS 207
V+ L+
Sbjct: 382 VQILT 386
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AER RR +I++RL+ LQD+VP K + MLD ++Y++ L+++
Sbjct: 281 VRAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDR 340
Query: 203 VEFL 206
VE L
Sbjct: 341 VEKL 344
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RAR+G A D S+A R RR +I++RL+ LQ++VP K + + ML++ INYV+ LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTK-VDLVTMLEKAINYVKFLQLQV 417
Query: 204 EFLS 207
+ L+
Sbjct: 418 KVLT 421
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 148 GQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
G ATD S+ R RR KINERL+ LQ++VP K + + MLDE I+YV+ LQNQVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKSLQNLVPNGAK-VDIVTMLDEAIHYVKFLQNQVELL 58
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 126 RVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM 185
R + ++EE+K+ V +R +A H+ +ER RR KIN+R++ LQ +VP KT
Sbjct: 192 RPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKILQKLVPNSSKTDKA 251
Query: 186 TMMLDEIINYVQSLQNQVEFLS 207
+ MLDE+I Y++ LQ QV +S
Sbjct: 252 S-MLDEVIEYLKQLQAQVSMMS 272
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
R +R +A + H+L+E+ RR +INE+++ LQ ++P KT + MLD+ I Y++ LQ QV
Sbjct: 42 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKAS-MLDDAIEYLKHLQLQV 100
Query: 204 EFLSMK 209
+ LSM+
Sbjct: 101 QMLSMR 106
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
R +R +A + H+L+E+ RR +INE+++ LQ ++P KT + MLD+ I Y++ LQ QV
Sbjct: 40 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKAS-MLDDAIEYLKHLQLQV 98
Query: 204 EFLSMK 209
+ LSM+
Sbjct: 99 QMLSMR 104
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
R +R +A + H+L+E+ RR +INE+++ LQ ++P KT + MLD+ I Y++ LQ QV
Sbjct: 40 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKAS-MLDDAIEYLKHLQLQV 98
Query: 204 EFLSMK 209
+ LSM+
Sbjct: 99 QMLSMR 104
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 148 GQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
G ATD S+ R RR KINERL+ LQ++VP K + + MLDE I+YV+ LQ QVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKNLQNLVPNGAK-VDIVTMLDEAIHYVKFLQTQVELL 58
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R ++ + HSL+E+ RR +IN+++R LQ+++P C K ++ +LDE I+Y+++LQ QV+
Sbjct: 10 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKIS-ILDEAIDYLKTLQLQVQ 68
Query: 205 FLSM 208
+SM
Sbjct: 69 VMSM 72
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 132 KEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDE 191
KE E K RA ATD+ S+ R RR +INERLR LQ +VP K + ++ ML+E
Sbjct: 185 KEHEAPKLGRKSRAASSPATDAQSIYARKRRERINERLRILQTLVPNGTK-VDISTMLEE 243
Query: 192 IINYVQSLQNQVEFLS 207
+ YV+ LQ Q++ LS
Sbjct: 244 AVQYVKFLQLQIKLLS 259
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 130 NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
+E E K++ V +RR +A H+ +ER RR +IN++++ LQ +VP KT + ML
Sbjct: 228 DEDRETKTETVRSHSSRRTRAAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS-ML 286
Query: 190 DEIINYVQSLQNQVEFLSMK 209
DE+I Y++ LQ QV+ +S++
Sbjct: 287 DEVIEYLKQLQAQVQAMSVR 306
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AER RR +I+ +L+ LQ++VP K + MLD + +++ LQNQ
Sbjct: 292 IRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQ 351
Query: 203 VEFL 206
++ L
Sbjct: 352 IQVL 355
>gi|359478054|ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
Length = 357
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AER RR +I+ +L+ LQD+VP K MLD + +++ LQN+
Sbjct: 279 VRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNE 338
Query: 203 VEFLSMKL 210
V+ L+ +L
Sbjct: 339 VQKLNKEL 346
>gi|297745167|emb|CBI39159.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AER RR +I+ +L+ LQD+VP K MLD + +++ LQN+
Sbjct: 332 VRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNE 391
Query: 203 VEFLSMKL 210
V+ L+ +L
Sbjct: 392 VQKLNKEL 399
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 104 EDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRG 163
+D + ++T + +GN K RA RG AT+ SL R RR
Sbjct: 158 DDDGGYACVDTQSSSSCTSEDGNFEGNTNSSSKK---TCARASRGAATEPQSLYARKRRE 214
Query: 164 KINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLT 211
+INERLR LQ++VP K + ++ ML+E YV+ LQ Q++ LS T
Sbjct: 215 RINERLRILQNLVPNGTK-VDISTMLEEAAQYVKFLQLQIKLLSCDDT 261
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++ P K MLD + +++ LQ Q
Sbjct: 337 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQKQ 396
Query: 203 VEFLS 207
V+ L+
Sbjct: 397 VKTLT 401
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 129 GNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMM 188
G+E++++++ V +R +A H+ +ER RR KIN+R++ LQ +VP KT + M
Sbjct: 250 GDEEKKKRANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKAS-M 308
Query: 189 LDEIINYVQSLQNQVEFL 206
LDE+I Y++ LQ QV+ +
Sbjct: 309 LDEVIEYLKQLQAQVQMM 326
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AER RR +I+E+LR LQ +VP K + MLD +++++ LQ+Q
Sbjct: 134 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 193
Query: 203 VEFL 206
++ L
Sbjct: 194 LQTL 197
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 134 EEKSKEVVHVRA--RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDE 191
EE + + +R+ +R +A + H+L+E+ RR +INE+++ LQ+++P KT + MLDE
Sbjct: 122 EEVATKAAPLRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS-MLDE 180
Query: 192 IINYVQSLQNQVEFLSMK 209
I Y++ LQ QV+ LSM+
Sbjct: 181 AIEYLKQLQLQVQMLSMR 198
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AER RR +I+E+LR LQ +VP K + MLD +++++ LQ+Q
Sbjct: 285 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 344
Query: 203 VEFL 206
++ L
Sbjct: 345 LQTL 348
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R + + H+L+ER RR +INE++R LQ+++P C K + ML+E I Y+++LQ QV+
Sbjct: 210 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 268
Query: 205 FLSM 208
+SM
Sbjct: 269 MMSM 272
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKT 182
VRARRGQATD HS+AER+RR +I ER++ LQ++VP K
Sbjct: 241 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKV 280
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 66/110 (60%), Gaps = 9/110 (8%)
Query: 108 PVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVH--------VRARRGQATDSHSLAER 159
P+ ++ T+ ++K S R + +E E++S + H +R +A + H+ +ER
Sbjct: 685 PLQKVRTSNKRKCSEREETECQSEDGEDESVDTKHKPITTGRGSTTKRSRAAEVHNQSER 744
Query: 160 VRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMK 209
RR +INE++R LQ+++P KT + MLDE I+Y++ LQ Q++ +S++
Sbjct: 745 RRRDRINEKMRALQELIPNSNKTDKAS-MLDEAIDYLKILQLQLQMMSIR 793
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
Query: 119 KNSGRRKRVKGNEKEE-----EKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQ 173
+ SG+RK + E+ E ++ + RR A H+L+ER RR +INE+++ LQ
Sbjct: 218 RRSGKRKHNDATDAEDVGLECEPAQRTTTAKRRR--AAQVHNLSERRRRDRINEKMKALQ 275
Query: 174 DIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
+++P C K + MLDE I Y++SLQ Q++ + M
Sbjct: 276 ELIPHCNKADKAS-MLDEAIEYLKSLQLQLQVVWM 309
>gi|357142794|ref|XP_003572696.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 317
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AER RR +I+E+LR LQD+VP K + MLD + +++ LQ+Q
Sbjct: 241 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTSDMLDLAVEHIKGLQSQ 300
Query: 203 VEFL 206
++ +
Sbjct: 301 LQAM 304
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQ--DIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
ARR +A + H+L+ER RR +INE++R LQ +++P C KT + MLDE I Y++SLQ Q
Sbjct: 162 ARRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNKTDKAS-MLDEAIEYLKSLQLQ 220
Query: 203 VEFLSM 208
+ + M
Sbjct: 221 LRVMWM 226
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 130 NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
++ +++K+ V +R +A H+ +ER RR KIN+R++ LQ +VP KT + ML
Sbjct: 264 DDDDKQKANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKAS-ML 322
Query: 190 DEIINYVQSLQNQVEFLS 207
DE+I Y++ LQ QV+ +S
Sbjct: 323 DEVIEYLKQLQAQVQMMS 340
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
H+ +ER RR +INE+L+ LQ+++P C KT ++ MLDE I+Y++SLQ Q++ L M
Sbjct: 18 HNFSERRRRDRINEKLKALQELLPNCTKTDKVS-MLDEAIDYLKSLQLQLQMLVM 71
>gi|255572912|ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
gi|223533239|gb|EEF34994.1| DNA binding protein, putative [Ricinus communis]
Length = 377
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AER RR +I+ RL+ LQD+VP K MLD + +++ LQ +
Sbjct: 299 IRAKRGCATHPRSIAERERRTRISGRLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQGE 358
Query: 203 VEFLSMKL 210
V+ L +L
Sbjct: 359 VQKLHKEL 366
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 23/127 (18%)
Query: 83 VTSTKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVH 142
VT TK +S R+ E ED S ++T ++ +GR K
Sbjct: 551 VTGTKRKSSEREEPECQSEDMEDES----VDTKQKPATTGRVSTTK-------------- 592
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
R +A + H+ +ER RR +INE++R LQ+++P KT + MLDE I Y++ LQ Q
Sbjct: 593 ----RSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKAS-MLDEAIEYLKMLQLQ 647
Query: 203 VEFLSMK 209
++ +S++
Sbjct: 648 LQMMSIR 654
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+ +ER RR +INE+++ LQ++VP C K+ + +LDE I Y++SLQ QV+
Sbjct: 140 RRARAAEVHNQSERRRRDRINEKMKALQELVPHCNKSDKAS-ILDEAIEYLKSLQLQVQI 198
Query: 206 LSMKLTAASTFY 217
+ M A +
Sbjct: 199 MWMTTGMAPMMF 210
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AER RR +I+E+LR LQ +VP K MLD +++++ LQN+
Sbjct: 143 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQNE 202
Query: 203 VEFL 206
++ L
Sbjct: 203 LQAL 206
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AER RR +I+E+LR LQ++VP K MLD + +++ LQ+Q
Sbjct: 141 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 200
Query: 203 VEFL 206
++ L
Sbjct: 201 LQAL 204
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+E+ RR +INE+++ LQ+++P KT + MLDE I Y++ LQ QV+
Sbjct: 142 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQ 200
Query: 205 FLSMK 209
L+M+
Sbjct: 201 MLTMR 205
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA+RG ATD S+ R RR KINERL+ LQ +VP + + + ML+E I++V+ L+ Q+
Sbjct: 471 RAKRGSATDPQSVYARHRREKINERLKTLQRLVPNG-EQVDIVTMLEEAIHFVKFLEFQL 529
Query: 204 EFL 206
E L
Sbjct: 530 ELL 532
>gi|224131550|ref|XP_002321112.1| predicted protein [Populus trichocarpa]
gi|222861885|gb|EEE99427.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AER RR +I+ +L+ LQD+VP K ML+ + +++ LQN+
Sbjct: 263 IRAKRGCATHPRSIAERERRTRISGKLKTLQDLVPNMDKQTSYADMLELAVKHIKGLQNE 322
Query: 203 VEFLSMKL 210
VE L +L
Sbjct: 323 VEKLHKEL 330
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 54 DNFFEFPGNLAENFPGNFIQNNMLPVCHTVTSTKCESKNRKAVEISESSNEDSSPVSEIE 113
D+FF F L N+ +N V S + K RK ++S SN V+E +
Sbjct: 43 DDFFPFGTILQSNYAAVLDGSNH-QTNRNVDSRQDLLKPRKKQKLSSESN----LVTEPK 97
Query: 114 TNKRKKNSGRRKRVKGNEKEEEKSKEVV---------HVRARRGQATDSHSLAERVRRGK 164
T R S N ++EK+ +V +A RG A+D SL R RR +
Sbjct: 98 TAWRDGQS----LSSYNSSDDEKALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRER 153
Query: 165 INERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
IN+RL+ LQ +VP K + ++ ML++ ++YV+ LQ Q++ LS
Sbjct: 154 INDRLKTLQSLVPNGTK-VDISTMLEDAVHYVKFLQLQIKLLS 195
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
R +RG ATD S+ R RR KI ERLR LQ ++P K + + MLDE ++YVQ L+ QV
Sbjct: 448 RVQRGSATDPQSVHARARREKIAERLRKLQHLIPNGGK-VDIVTMLDEAVHYVQFLKRQV 506
>gi|449468734|ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 370
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AER RR +I+ +L+ LQ++VP K + MLD + +++ LQNQ
Sbjct: 292 IRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQ 351
Query: 203 VEFL 206
++ L
Sbjct: 352 IQKL 355
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
H+ +ER RR +INE+L+ LQ+++P C KT ++ MLDE I+Y++SLQ Q++ L M
Sbjct: 22 HNFSERRRRDRINEKLKALQELLPNCTKTDKVS-MLDEAIDYLKSLQIQLQMLVM 75
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMK 209
H+L+E+ RRG+INE+++ LQ+++P KT + MLDE I Y++ LQ QV+ LSM+
Sbjct: 145 HNLSEKRRRGRINEKMKALQNLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQMLSMR 199
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA +G ATD SL R RR KINERL+ LQ++VP K + ++ ML+E ++YV+ LQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQI 226
Query: 204 E 204
+
Sbjct: 227 K 227
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+++E+ RR +INE+++ LQ+++P KT + MLDE I Y++ LQ QV+
Sbjct: 154 SKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQ 212
Query: 205 FLSMK 209
LSM+
Sbjct: 213 MLSMR 217
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
R +R +A + H+L+ER RR +INE++R LQ+++P KT + MLDE I Y++ LQ Q
Sbjct: 11 TRPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNKTDKAS-MLDEAIEYLKMLQLQ 69
Query: 203 VEFLSMKLTAASTFY 217
++ ++L +S +
Sbjct: 70 LQVPKIELLHSSHTF 84
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AER RR +I+ +L+ LQD+VP K MLD + +++ LQ Q
Sbjct: 208 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQTQ 267
Query: 203 VEFL 206
V+ L
Sbjct: 268 VQKL 271
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AER RR +I+ R++ LQD+ P K MLD + Y++ LQ Q
Sbjct: 360 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQKQ 419
Query: 203 VEFL 206
V+ L
Sbjct: 420 VKIL 423
>gi|77556977|gb|ABA99773.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 266
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
R A +H+L E+ RR KI ER R LQ +VPGC LD+ I Y++SLQ+Q+E
Sbjct: 79 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 138
Query: 206 LS-MKLTAASTFY 217
S + AA+ Y
Sbjct: 139 TSAVGSPAAAVLY 151
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+ER RR +INE+++ LQ+++P KT + MLDE I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKAS-MLDEAIEYLKMLQLQLQ 74
Query: 205 FLS 207
LS
Sbjct: 75 VLS 77
>gi|218187189|gb|EEC69616.1| hypothetical protein OsI_38990 [Oryza sativa Indica Group]
Length = 379
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
R A +H+L E+ RR KI ER R LQ +VPGC LD+ I Y++SLQ+Q+E
Sbjct: 192 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 251
Query: 206 LS-MKLTAASTFY 217
S + AA+ Y
Sbjct: 252 TSAVGSPAAAVLY 264
>gi|224065030|ref|XP_002301638.1| predicted protein [Populus trichocarpa]
gi|222843364|gb|EEE80911.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AER RR +I+ +L+ LQD+VP K MLD + +++ LQN+
Sbjct: 77 IRAKRGFATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDFAVQHIKGLQNE 136
Query: 203 VEFLSMKL 210
VE L ++
Sbjct: 137 VEKLHKEM 144
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 161 RRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTF 216
RR KINERL+ LQ +VPGC K+ LD+ I+Y++SLQ+QV+ +S+ L + + +
Sbjct: 225 RRHKINERLKTLQQLVPGCSKS-NQASTLDQTIHYMKSLQHQVQAMSVGLASPAVY 279
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 130 NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
+E E K++ RR +A H+ +ER RR +IN++++ LQ +VP KT + ML
Sbjct: 166 DEDRETKTQTGRSHSTRRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSKTDKAS-ML 224
Query: 190 DEIINYVQSLQNQVEFLSMK 209
DE+I Y++ LQ QV+ +S++
Sbjct: 225 DEVIEYLKQLQAQVQMMSVR 244
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 129 GNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMM 188
G+ E S + ++R ++ + H+++E+ RR +INE+++ LQ+++P KT + M
Sbjct: 176 GDLPEVPSSTNLPRNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKAS-M 234
Query: 189 LDEIINYVQSLQNQVEFLSMK 209
LDE I Y++ LQ QV+ LSM+
Sbjct: 235 LDEAIEYLKQLQLQVQMLSMR 255
>gi|242062246|ref|XP_002452412.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
gi|241932243|gb|EES05388.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
Length = 338
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AER RR +I+E+LR LQD+VP K MLD + +++ LQ++
Sbjct: 262 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTADMLDLAVEHIKGLQSE 321
Query: 203 VEFL 206
++ L
Sbjct: 322 LQAL 325
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+ER RR +INE+++ LQ+++P KT + MLDE I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKAS-MLDEAIEYLKMLQLQLQ 74
Query: 205 FLS 207
LS
Sbjct: 75 VLS 77
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
H+L+ER RR KINE++R L++++P C K M MLD+ I+Y+++L+ Q++ +SM
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNK-MDKASMLDDAIDYLKTLKLQLQIMSM 266
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
H+L+ER RR KINE++R L++++P C K M MLD+ I+Y+++L+ Q++ +SM
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNK-MDKASMLDDAIDYLKTLKLQLQIMSM 266
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+E+++ L+ + P K MLD + Y++ LQ Q
Sbjct: 167 IRAKRGFATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVEYIKDLQEQ 226
Query: 203 VEFLS 207
V+ L+
Sbjct: 227 VKTLT 231
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AER RR +I+ R++ LQD+ P K MLD + Y++ LQ Q
Sbjct: 356 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQKQ 415
Query: 203 VEFL 206
V+ L
Sbjct: 416 VKML 419
>gi|222623194|gb|EEE57326.1| hypothetical protein OsJ_07428 [Oryza sativa Japonica Group]
Length = 103
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AER RR +I+E+LR LQ++VP K MLD + +++ LQ+Q
Sbjct: 27 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 86
Query: 203 VEFL 206
++ L
Sbjct: 87 LQAL 90
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 130 NEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMML 189
+E E K++ RR +A H+ +ER RR +IN++++ LQ +VP KT + ML
Sbjct: 204 DEDRETKTQTGRSHSTRRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSKTDKAS-ML 262
Query: 190 DEIINYVQSLQNQVEFLSMK 209
DE+I Y++ LQ QV+ +S++
Sbjct: 263 DEVIEYLKQLQAQVQMMSVR 282
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMT-------MMLDEIINYVQS 198
+R +A + H+L+ER RR +INE+++ LQ+++P C K T MLDE I Y+++
Sbjct: 55 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKLSSFTDSQTDKASMLDEAIEYLKT 114
Query: 199 LQNQVEFLSM 208
LQ QV+ +
Sbjct: 115 LQLQVQIFVL 124
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+ER RR +INER++ LQ+++P KT + MLDE I Y++ LQ+Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKTDKAS-MLDEAIEYLKLLQHQLQ 62
Query: 205 FL 206
+
Sbjct: 63 VV 64
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RAR+G A D S+A R RR +I++RL+ LQ++VP K + + ML++ INYV+ LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTK-VDLVTMLEKAINYVKFLQLQV 417
Query: 204 E 204
+
Sbjct: 418 K 418
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AER+RR +I+ER++ LQ++ P K ML+ + Y++ LQ Q
Sbjct: 342 IRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDKQTSTADMLELAVEYIKGLQRQ 401
Query: 203 VEFLS 207
V+ L+
Sbjct: 402 VKTLT 406
>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269 [Arabidopsis thaliana]
Length = 362
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AER RR +I+ +L+ LQD+VP K + MLD + +++ LQ+Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 203 VEFL 206
++ L
Sbjct: 343 LQNL 346
>gi|18390573|ref|NP_563749.1| transcription factor bHLH128 [Arabidopsis thaliana]
gi|75299737|sp|Q8H102.1|BH128_ARATH RecName: Full=Transcription factor bHLH128; AltName: Full=Basic
helix-loop-helix protein 128; Short=AtbHLH128;
Short=bHLH 128; AltName: Full=Transcription factor EN
74; AltName: Full=bHLH transcription factor bHLH128
gi|24030386|gb|AAN41354.1| unknown protein [Arabidopsis thaliana]
gi|332189775|gb|AEE27896.1| transcription factor bHLH128 [Arabidopsis thaliana]
Length = 362
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AER RR +I+ +L+ LQD+VP K + MLD + +++ LQ+Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 203 VEFL 206
++ L
Sbjct: 343 LQNL 346
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
Length = 61
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/39 (66%), Positives = 32/39 (82%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYK 181
VRARRGQATD HS+AER+RR KI ER++ LQ++VP K
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK 39
>gi|312282787|dbj|BAJ34259.1| unnamed protein product [Thellungiella halophila]
Length = 353
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AER RR +I+ +L+ LQD+VP K + MLD + +++ LQ+Q
Sbjct: 274 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 333
Query: 203 VEFL 206
++ L
Sbjct: 334 LQNL 337
>gi|297843372|ref|XP_002889567.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335409|gb|EFH65826.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AER RR +I+ +L+ LQD+VP K + MLD + +++ LQ+Q
Sbjct: 278 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 337
Query: 203 VEFL 206
++ L
Sbjct: 338 LQNL 341
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+A R AT+S SL R RR +INERLR LQ++VP K + ++ ML+E + YV+ LQ Q
Sbjct: 210 AKADRRSATESQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVEYVKFLQLQ 268
Query: 203 VEFLS 207
++ LS
Sbjct: 269 IKLLS 273
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 129 GNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMM 188
G+ E S ++ ++R ++ + H+++E+ RR +INE+++ LQ+++P KT + M
Sbjct: 176 GDLPEVPSSTDLPRNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKAS-M 234
Query: 189 LDEIINYVQSLQNQVEFLSMK 209
LDE I Y++ LQ QV+ LSM+
Sbjct: 235 LDEAIEYLKQLQLQVQMLSMR 255
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 54/87 (62%), Gaps = 9/87 (10%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
R RR + H+L+E+ RR KIN+++R L++++P C K + MLD+ I+Y+++L+ Q+
Sbjct: 321 RVRRIRNPVVHNLSEKKRREKINKKMRTLKELIPNCNK-VDKASMLDDAIDYLKTLKLQL 379
Query: 204 EFLSMK--------LTAASTFYDFNSE 222
+ +SM L AA+T + N +
Sbjct: 380 QIMSMGNGLWPLMMLPAATTAHHMNPQ 406
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA A D SL R RR +INERLR LQ++VP K + ++ ML+E + YV+ LQ Q+
Sbjct: 265 RATTSAAADPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 323
Query: 204 EFLS 207
+ LS
Sbjct: 324 KLLS 327
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 8/89 (8%)
Query: 133 EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEI 192
E E+ R +R +A + H+L+E+ RR +INE+++ LQ ++P KT + MLD+
Sbjct: 16 ESEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKAS-MLDDA 74
Query: 193 INYVQSLQNQVE-------FLSMKLTAAS 214
I Y++ LQ QV+ L +LT+AS
Sbjct: 75 IEYLKQLQLQVQMIYPDEMMLKHRLTSAS 103
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AER RR +I+ +L+ LQD+VP K + MLD + +++ LQ Q
Sbjct: 265 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQTQ 324
Query: 203 VEFLSMKL 210
V+ L L
Sbjct: 325 VQKLHEDL 332
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
+++ ++T+ H+L+ER RR +INER+R LQ+++P C K + MLDE I Y++SLQ Q++
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKADKAS-MLDEAIEYLKSLQLQLQ 483
Query: 205 FLSMKLTAASTFYDFNSESDAVETMQKAKAYKAKEMERLMKEG 247
+SM Y + ++ M A + M M+ G
Sbjct: 484 IMSM---GGGGLYMPMTLPAGMQHMHAAHMFPFSPMSVAMQMG 523
>gi|242076304|ref|XP_002448088.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
gi|241939271|gb|EES12416.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
Length = 226
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
VRA+RG AT S+AER RR +I+E+LR LQ +VP K MLD +++++ LQ++
Sbjct: 146 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQSE 205
Query: 203 VEFL 206
++ L
Sbjct: 206 LQAL 209
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 148 GQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
G ATD S+ R RR KINERL+ LQ +VP K + + MLDE I+YVQ LQ QV L
Sbjct: 1 GSATDPQSVYARHRREKINERLKTLQHLVPNGAK-VDIVTMLDEAIHYVQFLQLQVTLL 58
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+ER RR +INER++ LQ+++P KT + MLDE I Y++ LQ+Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKTDKAS-MLDEAIEYLKLLQHQLQ 62
Query: 205 FL 206
+
Sbjct: 63 VV 64
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA+RG AT S+AER RR +I+ +L+ LQ++VP K MLD + +++ LQ+Q
Sbjct: 231 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 290
Query: 203 VEFL 206
VE L
Sbjct: 291 VESL 294
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+E+ RR +INE+++ LQ+++P KT + MLDE I Y++ LQ QV+
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNKTDKAS-MLDEAIEYLKKLQLQVQ 210
Query: 205 FLSMK 209
LS +
Sbjct: 211 MLSAR 215
>gi|242084062|ref|XP_002442456.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
gi|241943149|gb|EES16294.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
Length = 219
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 121 SGRRKRVKGNEKEEEKSKEVVHVRARRGQA-TDSHSLAERVRRGKINERLRCLQDIVPGC 179
SG+ + K +EK K R +R ++HSL E+ RR KI E+L+ LQ +VPGC
Sbjct: 133 SGKGLESSSDHKLQEKRKTSSTGRGKRSHHHAEAHSLTEKRRRLKIKEKLKTLQQLVPGC 192
Query: 180 YKTMGMTMMLDEIINYVQSLQNQV 203
LD+ I Y++SLQ +
Sbjct: 193 PNNSNQASTLDQTIRYIKSLQQHI 216
>gi|297820750|ref|XP_002878258.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
gi|297324096|gb|EFH54517.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INER++ LQ+++P C KT + +LDE I+Y++SLQ Q++
Sbjct: 251 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKAS-ILDEAIDYLKSLQMQLQV 309
Query: 206 LSM 208
+ M
Sbjct: 310 MWM 312
>gi|3763923|gb|AAC64303.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA+RG AT S+AER RR +I+ +L+ LQ++VP K MLD + +++ LQ+Q
Sbjct: 231 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 290
Query: 203 VE 204
VE
Sbjct: 291 VE 292
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMK 209
A + H+L+E+ RR +INE+++ LQ+++P KT + MLDE I Y++ LQ QV+ L+M+
Sbjct: 188 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQMLTMR 246
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+E+ RR +INE+++ LQ+++P KT + MLDE I Y++ LQ QV+
Sbjct: 157 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQ 215
Query: 205 FLSMK 209
LS++
Sbjct: 216 MLSLR 220
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 27/174 (15%)
Query: 47 FMPFSNPDNFFEFP----GNLAENFPGNFIQNNMLPVCHTVTSTKCESKNRKAVEISESS 102
F S+ D+FF F GN A G+ Q N+ S + K RK +IS S
Sbjct: 37 FDVVSSSDDFFPFSKILQGNYAAVLDGSNHQTNLYD-----DSRQELVKPRKKQKISSES 91
Query: 103 NEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVV---------HVRARRGQATDS 153
N + P + + N N ++E + +V ++ +G A+D
Sbjct: 92 NLVTEPKTAWRDGQSLSNY--------NSSDDENALGLVSNTSKSLKRKAKSNKGIASDP 143
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
SL R RR +IN+RL+ LQ +VP K + ++ ML++ ++YV+ LQ Q++ LS
Sbjct: 144 QSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLEDAVHYVKFLQLQIKLLS 196
>gi|145360933|ref|NP_181843.2| transcription factor bHLH129 [Arabidopsis thaliana]
gi|218563526|sp|Q9ZW81.2|BH129_ARATH RecName: Full=Transcription factor bHLH129; AltName: Full=Basic
helix-loop-helix protein 129; Short=AtbHLH129;
Short=bHLH 129; AltName: Full=Transcription factor EN
73; AltName: Full=bHLH transcription factor bHLH129
gi|330255119|gb|AEC10213.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 297
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA+RG AT S+AER RR +I+ +L+ LQ++VP K MLD + +++ LQ+Q
Sbjct: 233 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 292
Query: 203 VE 204
VE
Sbjct: 293 VE 294
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 129 GNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMM 188
G E +E S+E R + +H ++ + RR +INE+L+ LQ+++P C KT ++ M
Sbjct: 121 GGEGKEAASQEEEQTPKLR--SVIAHLVSRKRRRDRINEKLKALQELLPNCTKTDKVS-M 177
Query: 189 LDEIINYVQSLQNQVEFLSM 208
LDE I+Y++SLQ Q++ L M
Sbjct: 178 LDEAIDYLKSLQLQLQMLVM 197
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R ++ + H+++E+ RR +INE+++ LQ+++P KT + MLDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQ 250
Query: 205 FLSMK 209
LSM+
Sbjct: 251 MLSMR 255
>gi|297828011|ref|XP_002881888.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
gi|297327727|gb|EFH58147.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
RA+RG AT S+AER RR +I+ +L+ LQ++VP K MLD + +++ LQ+Q
Sbjct: 233 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 292
Query: 203 VE 204
VE
Sbjct: 293 VE 294
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 14/86 (16%)
Query: 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMK 209
A + H+L+E+ RR +INE+++ LQ+++P KT + MLDE I Y++ LQ QV+ LSM+
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQMLSMR 203
Query: 210 ---------LTAASTF----YDFNSE 222
L AS F DF E
Sbjct: 204 NGMSLHPMCLPGASQFSQIRMDFGGE 229
>gi|357504213|ref|XP_003622395.1| BHLH transcription factor [Medicago truncatula]
gi|355497410|gb|AES78613.1| BHLH transcription factor [Medicago truncatula]
Length = 141
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 161 RRGKINERLRCLQDIVPGCYK-TMGMTMMLDEIINYVQSLQNQVE 204
RR KI+ER++ L+D+VP K +G T+ML EIINY+QSLQ+QVE
Sbjct: 60 RREKISERIKMLEDLVPRYTKLVIGKTLMLYEIINYIQSLQHQVE 104
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 104 EDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRG 163
+D VS + ++ G++KR G V +R +A H+ +ER RR
Sbjct: 235 DDHDSVSHSKPVGEDQDEGKKKRANGKSS----------VSTKRSRAAAIHNQSERKRRD 284
Query: 164 KINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
KIN+R++ LQ +VP K+ + MLDE+I Y++ LQ Q++ +
Sbjct: 285 KINQRMKTLQKLVPNSSKSDKAS-MLDEVIEYLKQLQAQLQMI 326
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 11/86 (12%)
Query: 119 KNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
K+ G RK KE KS V +R +A H+ +ER RR KIN+R++ LQ +VP
Sbjct: 273 KDEGDRK------KENAKSS----VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPN 322
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVE 204
KT + MLDE+I Y++ LQ QV+
Sbjct: 323 SNKTDKAS-MLDEVIEYLKQLQAQVQ 347
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 11/86 (12%)
Query: 119 KNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 178
K+ G RK KE KS V +R +A H+ +ER RR KIN+R++ LQ +VP
Sbjct: 273 KDEGDRK------KENAKSS----VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPN 322
Query: 179 CYKTMGMTMMLDEIINYVQSLQNQVE 204
KT + MLDE+I Y++ LQ QV+
Sbjct: 323 SNKTDKAS-MLDEVIEYLKQLQAQVQ 347
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RA+RG AT S+AERVRR +I+ER+R LQ++ P K LD I ++ LQ Q
Sbjct: 336 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPDMDKQTSTADKLDLSIELIKDLQKQ 395
Query: 203 VEFLS 207
V+ L+
Sbjct: 396 VKSLA 400
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 138 KEVVHVRARRGQ---ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIIN 194
+E+V +R +R + D S+A R RR +I++R+R LQ VPG K M MLDE I+
Sbjct: 374 EEIVQLRPKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTK-MDTASMLDEAIH 432
Query: 195 YVQSLQNQVEFL 206
YV+ LQ Q++ L
Sbjct: 433 YVKFLQQQLQTL 444
>gi|312283297|dbj|BAJ34514.1| unnamed protein product [Thellungiella halophila]
Length = 448
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INER++ LQ+++P C KT + +LDE I+Y++SLQ Q++
Sbjct: 257 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKAS-ILDEAIDYLKSLQMQLQV 315
Query: 206 LSM 208
+ M
Sbjct: 316 MWM 318
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
R+R+G A D S+A R RR +I++RL+ LQD+VP K + + ML++ INYV+ +Q Q+
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSK-VDLVTMLEKAINYVKFMQLQL 292
Query: 204 E 204
+
Sbjct: 293 Q 293
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INER++ LQ+++P C KT + +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKAS-ILDEAIDYLKSLQLQLQV 311
Query: 206 LSM 208
+ M
Sbjct: 312 MWM 314
>gi|242084060|ref|XP_002442455.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
gi|241943148|gb|EES16293.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
Length = 155
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARR ++H+L E+ RR KI+++L+ L+ +VPGC +LD+ I +++SLQ Q++
Sbjct: 19 ARRSHPAETHNLTEKRRRRKIDDKLKTLRQLVPGCDDKSNQASILDQTIQHIKSLQQQIQ 78
Query: 205 F 205
Sbjct: 79 V 79
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
R+R+G A D S+A R RR +I++RL+ LQD+VP K + + ML++ INYV+ +Q Q+
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSK-VDLVTMLEKAINYVKFMQLQL 292
Query: 204 E 204
+
Sbjct: 293 Q 293
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 149 QATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
+A + H+L+E+ RR +INE+++ LQ ++P KT + MLDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQMLTM 255
Query: 209 K 209
+
Sbjct: 256 R 256
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+A +G ATD SL R RR +I++RLR LQ++VP K + ++ ML+E + YV+ LQ Q
Sbjct: 240 TKASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQ 298
Query: 203 VEFLS 207
+ LS
Sbjct: 299 NKLLS 303
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 131 EKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLD 190
++EEE K + R Q HSL+ER RR KIN+++R LQ ++P K + MLD
Sbjct: 365 DEEEEIPKSTSTKKKRIPQV---HSLSERKRRDKINKKMRALQALIPNSDK-VDKASMLD 420
Query: 191 EIINYVQSLQNQVEFLSMK 209
+ I Y+++LQ Q++ +SM+
Sbjct: 421 KAIEYLKTLQLQLQMMSMR 439
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 149 QATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
+A + H+L+E+ RR +INE+++ LQ ++P KT + MLDE I Y++ LQ QV+ L+M
Sbjct: 176 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQMLTM 234
Query: 209 K 209
+
Sbjct: 235 R 235
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 125 KRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMG 184
KR G+E+++++ V ++R +A H+ +ER RR KIN+R++ LQ +VP KT
Sbjct: 4 KRRAGDEEDKKRGTGKSSVSSKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDK 63
Query: 185 MTMMLDEIINYVQSLQNQVE 204
+ MLDE+I Y++ LQ QV+
Sbjct: 64 AS-MLDEVIEYLKQLQAQVQ 82
>gi|223702408|gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
Length = 495
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
Query: 99 SESSNEDSSP--VSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSL 156
S SS E+ P +++++ + + R + G E+ EK K R ++D ++
Sbjct: 344 SSSSIEEPDPEAIAQMKEMIYRAAAFRPVSLLGLEEVAEKPK-----RKNVKISSDPQTV 398
Query: 157 AERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTF 216
A R RR +I++R+R LQ IVPG K M MLDE NY++ L++QV+ L ST
Sbjct: 399 AARQRRERISDRIRVLQKIVPGGSK-MDTASMLDEAANYLKFLRSQVKALESLGNKVSTA 457
Query: 217 YDFNSES 223
D+ S S
Sbjct: 458 MDYCSPS 464
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 123 RRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKT 182
R +R G+E+++++ V ++R +A H+ +ER RR KIN+R++ LQ +VP KT
Sbjct: 256 RPQRRAGDEEDKKRGTGKSSVSSKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT 315
Query: 183 MGMTMMLDEIINYVQSLQNQVE 204
+ MLDE+I Y++ LQ QV+
Sbjct: 316 DKAS-MLDEVIEYLKQLQAQVQ 336
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+L+E+ RR +INE+++ LQ+++P KT MLDE I Y++ LQ QV+
Sbjct: 134 SKRTRAAEVHNLSEKRRRSRINEKMKALQNLIPNSSKT-DKASMLDEAIEYLKLLQLQVQ 192
Query: 205 FLSMKL 210
LS++
Sbjct: 193 GLSVRF 198
>gi|224091024|ref|XP_002309150.1| predicted protein [Populus trichocarpa]
gi|222855126|gb|EEE92673.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Query: 122 GRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYK 181
GR KR G +KS V + +TD S+A R RR +I++R + LQ +VPG K
Sbjct: 21 GREKRTGG-----KKSNGGVKL------STDPQSVAARERRHRISDRFKILQSLVPGGTK 69
Query: 182 TMGMTMMLDEIINYVQSLQNQV 203
M ML+E INYV+ L+NQ+
Sbjct: 70 -MDTVSMLEEAINYVKFLKNQI 90
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 59/100 (59%), Gaps = 7/100 (7%)
Query: 113 ETNKRKKNSGRRKRV-----KGNEKEEEKSKEV-VHVRARRGQATDSHSLAERVRRGKIN 166
+ + K ++ +R R +GN + E + + RA++G A D S+A R RR +I+
Sbjct: 372 DAKRHKGSTAQRTRFGASSKRGNSHKREPALNTNLKPRAKQGCANDPQSIAARQRRERIS 431
Query: 167 ERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
+RL+ LQ+++P K + + ML++ INYV+ LQ QV+ L
Sbjct: 432 DRLKILQELIPNGSK-VDLVTMLEKAINYVKFLQLQVKVL 470
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMK 209
H+L+E+ RR +INE+++ LQ+++P KT + MLDE I Y++ LQ QV+ LSM+
Sbjct: 149 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQMLSMR 203
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 59/100 (59%), Gaps = 7/100 (7%)
Query: 113 ETNKRKKNSGRRKRV-----KGNEKEEEKSKEV-VHVRARRGQATDSHSLAERVRRGKIN 166
+ + K ++ +R R +GN + E + + RA++G A D S+A R RR +I+
Sbjct: 372 DAKRHKGSTAQRTRFGASSKRGNSHKREPALNTNLKPRAKQGCANDPQSIAARQRRERIS 431
Query: 167 ERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
+RL+ LQ+++P K + + ML++ INYV+ LQ QV+ L
Sbjct: 432 DRLKILQELIPNGSK-VDLVTMLEKAINYVKFLQLQVKVL 470
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 149 QATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
+A + H+L+E+ RR +INE+++ LQ ++P KT + MLDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQMLTM 255
Query: 209 K 209
+
Sbjct: 256 R 256
>gi|30694919|ref|NP_851021.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|7529749|emb|CAB86934.1| putative protein [Arabidopsis thaliana]
gi|332646347|gb|AEE79868.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 442
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INER++ LQ+++P C +T + +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKAS-ILDEAIDYLKSLQMQLQV 311
Query: 206 LSM 208
+ M
Sbjct: 312 MWM 314
>gi|20127070|gb|AAM10954.1|AF488598_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 442
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INER++ LQ+++P C +T + +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKAS-ILDEAIDYLKSLQMQLQV 311
Query: 206 LSM 208
+ M
Sbjct: 312 MWM 314
>gi|30694924|ref|NP_191465.3| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315658|ref|NP_001030889.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315685|ref|NP_001030890.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|75297820|sp|Q84LH8.1|PIF5_ARATH RecName: Full=Transcription factor PIF5; AltName: Full=Basic
helix-loop-helix protein 65; Short=AtbHLH65; Short=bHLH
65; AltName: Full=Phytochrome interacting factor-like 6;
AltName: Full=Phytochrome-interacting factor 5; AltName:
Full=Transcription factor EN 103; AltName: Full=bHLH
transcription factor bHLH065
gi|28372349|dbj|BAC56978.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|222424174|dbj|BAH20046.1| AT3G59060 [Arabidopsis thaliana]
gi|225898729|dbj|BAH30495.1| hypothetical protein [Arabidopsis thaliana]
gi|332646348|gb|AEE79869.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646349|gb|AEE79870.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646350|gb|AEE79871.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 444
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INER++ LQ+++P C +T + +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKAS-ILDEAIDYLKSLQMQLQV 311
Query: 206 LSM 208
+ M
Sbjct: 312 MWM 314
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKT------MGMTMMLDEIINYVQS 198
+++ ++T+ H+L+ER RR +INER+R LQ+++P C K MLDE I Y++S
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKVDLFFLQADKASMLDEAIEYLKS 484
Query: 199 LQNQVEFLSMKLTAASTFYDFNSESDAVETMQKAKAYKAKEMERLMKEG 247
LQ Q++ +SM Y + ++ M A + M M+ G
Sbjct: 485 LQLQLQIMSM---GGGGLYMPMTLPAGMQHMHAAHMFPFSPMSVAMQMG 530
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 14/78 (17%)
Query: 143 VRARRGQATDSHSLAERV-------------RRGKINERLRCLQDIVPGCYKTMGMTMML 189
RA RG ATD SL R+ RR +INERLR LQ +VP K + ++ ML
Sbjct: 237 TRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTK-VDISTML 295
Query: 190 DEIINYVQSLQNQVEFLS 207
+E + YV+ LQ Q++ LS
Sbjct: 296 EEAVQYVKFLQLQIKLLS 313
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
+RR +A + H+ +ER RR +INE++R LQ ++P KT + ML+E I Y++SLQ Q++
Sbjct: 356 SRRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKTDKAS-MLEEAIEYLKSLQFQLQ 414
Query: 205 FLSM 208
+ M
Sbjct: 415 VMWM 418
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 24/89 (26%)
Query: 150 ATDSHSLAERV----------------------RRGKINERLRCLQDIVPGCYKTMGMTM 187
ATD HS+AERV RR +I ER++ LQ++VP KT +
Sbjct: 219 ATDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKTDKAS- 277
Query: 188 MLDEIINYVQSLQNQVEFLSM-KLTAAST 215
MLDEII+YV+ LQ QV+ LSM +L AS
Sbjct: 278 MLDEIIDYVKFLQLQVKVLSMSRLGGASA 306
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
R+ R ATD SL + RR +IN RLR LQ++VP K + ++ ML+E + YV+ LQ Q
Sbjct: 204 TRSNRWPATDPQSLYAKQRRERINARLRTLQNLVPNGTK-VDISTMLEEAVRYVKFLQLQ 262
Query: 203 VEFLS 207
++ LS
Sbjct: 263 IKLLS 267
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 152 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
D S+A R RR +I+ER+R LQ +VPG K M MLDE I+YV+ L+ QV+ L
Sbjct: 166 DPQSVAARHRRERISERMRILQRLVPGGTK-MDTASMLDEAIHYVKFLKKQVQSL 219
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 24/89 (26%)
Query: 150 ATDSHSLAERV----------------------RRGKINERLRCLQDIVPGCYKTMGMTM 187
ATD HS+AERV RR +I ER++ LQ++VP KT +
Sbjct: 218 ATDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKTDKAS- 276
Query: 188 MLDEIINYVQSLQNQVEFLSM-KLTAAST 215
MLDEII+YV+ LQ QV+ LSM +L AS
Sbjct: 277 MLDEIIDYVKFLQLQVKVLSMSRLGGASA 305
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMK 209
H+L+E+ RR +INE+++ LQ+++P KT + MLDE I Y++ LQ QV+ LS++
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQMLSLR 170
>gi|30689224|ref|NP_850381.1| transcription factor PIF4 [Arabidopsis thaliana]
gi|330255104|gb|AEC10198.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 428
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INER++ LQ+++P C KT + +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKAS-ILDEAIDYLKSLQLQLQV 312
Query: 206 L 206
+
Sbjct: 313 M 313
>gi|291506702|gb|ADE08783.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506704|gb|ADE08784.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506706|gb|ADE08785.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506708|gb|ADE08786.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506710|gb|ADE08787.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506712|gb|ADE08788.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 430
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INER++ LQ+++P C KT + +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKAS-ILDEAIDYLKSLQLQLQV 312
Query: 206 L 206
+
Sbjct: 313 M 313
>gi|30689218|ref|NP_565991.2| transcription factor PIF4 [Arabidopsis thaliana]
gi|28201855|sp|Q8W2F3.1|PIF4_ARATH RecName: Full=Transcription factor PIF4; AltName: Full=Basic
helix-loop-helix protein 9; Short=AtbHLH9; Short=bHLH 9;
AltName: Full=Phytochrome-interacting factor 4; AltName:
Full=Short under red-light 2; AltName:
Full=Transcription factor EN 102; AltName: Full=bHLH
transcription factor bHLH009
gi|18026966|gb|AAL55716.1|AF251694_1 putative transcription factor BHLH9 [Arabidopsis thaliana]
gi|21068661|emb|CAD29449.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|222423257|dbj|BAH19605.1| AT2G43010 [Arabidopsis thaliana]
gi|225898591|dbj|BAH30426.1| hypothetical protein [Arabidopsis thaliana]
gi|291506714|gb|ADE08789.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506716|gb|ADE08790.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506718|gb|ADE08791.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506720|gb|ADE08792.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506722|gb|ADE08793.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506724|gb|ADE08794.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506726|gb|ADE08795.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506728|gb|ADE08796.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|330255103|gb|AEC10197.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 430
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INER++ LQ+++P C KT + +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKAS-ILDEAIDYLKSLQLQLQV 312
Query: 206 L 206
+
Sbjct: 313 M 313
>gi|222424750|dbj|BAH20328.1| AT2G43010 [Arabidopsis thaliana]
Length = 409
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 146 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205
RR +A + H+L+ER RR +INER++ LQ+++P C KT + +LDE I+Y++SLQ Q++
Sbjct: 233 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKAS-ILDEAIDYLKSLQLQLQV 291
Query: 206 L 206
+
Sbjct: 292 M 292
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMK 209
H+L+E+ RR +INE+++ LQ+++P KT + MLDE I Y++ LQ QV+ L+M+
Sbjct: 128 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQMLTMR 182
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 24/89 (26%)
Query: 150 ATDSHSLAERV----------------------RRGKINERLRCLQDIVPGCYKTMGMTM 187
ATD HS+AERV RR +I ER++ LQ++VP KT +
Sbjct: 219 ATDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKTDKAS- 277
Query: 188 MLDEIINYVQSLQNQVEFLSM-KLTAAST 215
MLDEII+YV+ LQ QV+ LSM +L AS
Sbjct: 278 MLDEIIDYVKFLQLQVKVLSMSRLGGASA 306
>gi|77556450|gb|ABA99246.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|218187186|gb|EEC69613.1| hypothetical protein OsI_38987 [Oryza sativa Indica Group]
gi|222617411|gb|EEE53543.1| hypothetical protein OsJ_36752 [Oryza sativa Japonica Group]
Length = 265
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 105 DSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLAERVRRGK 164
D P++E K + R+RVK H R ++H L E+ RR +
Sbjct: 121 DGEPLTEKMDKKLPTRTEERRRVK-------------HKARRNPGYAETHGLTEKRRRSR 167
Query: 165 INERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFY 217
INE+ + LQ +VPGC K + LD I+Y++SLQ Q++ + + + Y
Sbjct: 168 INEKFKMLQRLVPGCDKC-SQSSTLDRTIHYMKSLQQQLQAMYPTMVRPAAVY 219
>gi|356536570|ref|XP_003536810.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 283
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 148 GQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
GQATD HS+AER+RR +I ER+R LQ++VP KT MLDEI++YV+ L+ QV+ LS
Sbjct: 127 GQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQVKVLS 185
Query: 208 M 208
M
Sbjct: 186 M 186
>gi|357454361|ref|XP_003597461.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486509|gb|AES67712.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 411
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 4/48 (8%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG----CYKTMGMT 186
+RA+RG AT S+AERVRR KI+ER+R LQD+VP C+ + +T
Sbjct: 332 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKICWTWLWIT 379
>gi|223942973|gb|ACN25570.1| unknown [Zea mays]
gi|413951549|gb|AFW84198.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 156
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 27/34 (79%)
Query: 188 MLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNS 221
MLDEIINYVQSLQ QVEFLSMKL + DFNS
Sbjct: 1 MLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNS 34
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 10/71 (14%)
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS------ 207
H+L+E+ RR KINE+++ LQ ++P KT + MLDE I Y++ LQ QV+ L+
Sbjct: 97 HNLSEKRRRSKINEKMKALQKLIPNSNKTDKAS-MLDEAIEYMKQLQLQVQTLAVMNGLG 155
Query: 208 ---MKLTAAST 215
M+LT +ST
Sbjct: 156 LNPMQLTISST 166
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 152 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
D S+A R+RR +I+E++R LQ +VPG K M MLDE I YV+ L+ Q+ L
Sbjct: 118 DPQSIAARLRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
R +R + + H+L+E+ RR KIN+++R L+D++P C K + MLD+ I+Y+++L+ Q+
Sbjct: 331 RVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNK-VDKASMLDDAIDYLKTLKLQL 389
Query: 204 E 204
+
Sbjct: 390 Q 390
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 148 GQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
G ATD S+ R RR KI ERLR LQ ++P K + + MLDE ++YVQ L+ QV L
Sbjct: 1 GSATDPQSVHARARREKIAERLRKLQHLIPNGGK-VDIVTMLDEAVHYVQFLKRQVTLL 58
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
+TD ++A R RR +INE++R LQ +VPG K M MLDE NY++ L++QV+ L
Sbjct: 341 STDPQTVAARHRRERINEKIRVLQKLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 396
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
++R +A + H+ +ER RR +INE++R LQ ++P KT + ML+E I Y++SLQ Q++
Sbjct: 356 SKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKTDKAS-MLEEAIEYLKSLQFQLQ 414
Query: 205 FLSM 208
+ M
Sbjct: 415 VMWM 418
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 22/114 (19%)
Query: 98 ISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDSHSLA 157
IS ++ P + + K ++SG KR+K N VVH ++
Sbjct: 203 ISHRISQGEVPDEDYKATKVDRSSGSNKRIKANS--------VVHKQS------------ 242
Query: 158 ERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS-MKL 210
ER RR KIN+R++ LQ +VP KT + MLDE+I Y++ LQ QV+ ++ MK+
Sbjct: 243 ERRRRDKINQRMKELQKLVPNSSKTDKAS-MLDEVIQYMKQLQAQVQMMNWMKM 295
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 120 NSGRRKRVKGNEKEEEKSKEVVHVRARRGQATDS------HSLAERVRRGKINERLRCLQ 173
+ +RK E +EE V AR G H+L ER RR KIN+R+R L+
Sbjct: 716 DDAQRKITVTQENDEEPEDVVKEKPAREGTGVKRSRNAQVHNLCERKRRDKINKRMRILK 775
Query: 174 DIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
+++P C KT + MLD+ I Y+++L+ Q++
Sbjct: 776 ELIPNCNKTDKAS-MLDDAIEYLKTLKLQIQ 805
>gi|255561634|ref|XP_002521827.1| DNA binding protein, putative [Ricinus communis]
gi|223539040|gb|EEF40637.1| DNA binding protein, putative [Ricinus communis]
Length = 284
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIIN 194
VRA+RG AT S+AERVRR +I++R+R LQ++VP K MLDE +
Sbjct: 192 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVG 243
>gi|302754898|ref|XP_002960873.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
gi|300171812|gb|EFJ38412.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
Length = 638
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 143 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQ 202
+RARRG AT S+AERVRR KI+E ++ L D+VP K ML+ + Y++ L+ +
Sbjct: 557 LRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEYMKQLKEK 616
Query: 203 VEFLSMKL 210
+E + +L
Sbjct: 617 IEQMKEEL 624
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
RA R T+ S+ R RR +INERL+ LQ++VP K + ++ ML+E ++YV+ LQ Q+
Sbjct: 227 RAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQI 285
Query: 204 EFLS 207
LS
Sbjct: 286 RLLS 289
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
A+R +A + H+ +ER RR +INE++R LQ+++P KT + MLDE I Y++ LQ Q++
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKAS-MLDEAIEYLKMLQLQLQ 77
Query: 205 FLSM 208
++
Sbjct: 78 VCAV 81
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 152 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLT 211
D S+A R RR +I+E++R LQ +VPG K M MLDE I+YV+ L+ Q++ L + +
Sbjct: 180 DPQSIAARHRRERISEKIRILQRMVPGGTK-MDTASMLDEAIHYVKFLKTQLKSLQERAS 238
Query: 212 AAST 215
A++
Sbjct: 239 GANS 242
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 144 RARRGQ--ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
+A+ G ATD SL R RR +INERL+ LQ++VP K + ++ ML+E ++YV+ LQ
Sbjct: 220 KAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAMHYVKFLQL 278
Query: 202 QVEFLS 207
Q++ LS
Sbjct: 279 QIKLLS 284
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 144 RARRGQ--ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQN 201
+A+ G ATD SL R RR +INERL+ LQ++VP K + ++ ML+E ++YV+ LQ
Sbjct: 220 KAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAMHYVKFLQL 278
Query: 202 QVEFLS 207
Q++ LS
Sbjct: 279 QIKLLS 284
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
++D ++A R+RR +++ERLR LQ +VPG K M MLDE +Y++ L++Q+E L
Sbjct: 232 SSDPQTVAARLRRERVSERLRVLQRLVPGGSK-MDTATMLDEAASYLKFLKSQLEAL 287
>gi|449463597|ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
Length = 550
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 115 NKRKKNSGRRKRVKGNEKEEEKSK----EVVHVRARRGQATDSHSLAERVRRGKINERLR 170
NKRK G + E E ++ +RR +A + H+L+ER RR +INE+++
Sbjct: 313 NKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEKMK 372
Query: 171 CLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFY 217
LQ+++P C KT + MLDE I Y++SLQ Q++ + M A +
Sbjct: 373 ALQELIPHCNKTDKAS-MLDEAIEYLKSLQLQLQVMWMGSGMAPMMF 418
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 158 ERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM-KLTAASTF 216
+R+RR +I ER++ LQ++VP KT + MLDEII+YV+ LQ QV+ LSM +L A+
Sbjct: 151 QRLRRERIAERMKSLQELVPNANKTDKAS-MLDEIIDYVKFLQLQVKVLSMSRLGGAAGM 209
>gi|255563356|ref|XP_002522681.1| hypothetical protein RCOM_0886600 [Ricinus communis]
gi|223538157|gb|EEF39768.1| hypothetical protein RCOM_0886600 [Ricinus communis]
Length = 77
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 27/33 (81%)
Query: 188 MLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 220
MLDEIINYVQSLQ QVEFLSMKL A + DFN
Sbjct: 1 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 33
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
++D ++A R+RR +++ERLR LQ +VPG K M MLDE +Y++ L++Q+E L
Sbjct: 276 SSDPQTVAARLRRERVSERLRVLQRLVPGGSK-MDTATMLDEAASYLKFLKSQLEAL 331
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 27/221 (12%)
Query: 5 AQDLQYFRASSSFPFLDID-PNIEQINNNLSVLDNTSLLNYQSFMPFSNPDNFFEFPGNL 63
A D Q A S F I NI N +L + +S ++ S S D++ + GNL
Sbjct: 83 ATDHQAEEAHSLISFKGIGFDNIMHNNGSLLSFEQSSRVSQTS----SQKDDYSAWEGNL 138
Query: 64 AENFPGNFIQNNMLPVCHT----VTSTKCESKNRKAVEISESSNE------DSSPVSE-I 112
+ N+ N M P C+T + C + + ++ N +S+ V++ I
Sbjct: 139 SYNYQ----WNEMNPKCNTSPRLMEDFNCFQRAGNFISMTGKENHGDWLYAESTIVADSI 194
Query: 113 ETNKRKKNSGRRKRVKGNEKEEEKSKEVVHV------RARRGQATDSHSLAERVRRGKIN 166
+ + S KR E + K+ + ++ G A D S+A + RR +I+
Sbjct: 195 QDSATPDASSFHKRPNMGESMQALKKQCNNATKKPKPKSAAGPAKDLQSIAAKNRRERIS 254
Query: 167 ERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
ERL+ LQD+VP K + + ML++ I+YV+ LQ QV+ L+
Sbjct: 255 ERLKVLQDLVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 294
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 152 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
D S+A R RR +I+E++R LQ +VPG K M MLDE I+YV+ L+ QV+ L
Sbjct: 154 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQSL 207
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 144 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203
R G A+D + + RR +INERL+ LQ +VP K + ++ ML+E + YV+ LQ Q+
Sbjct: 239 RCNGGSASDPQGVYAKKRRERINERLKILQSLVPNGTK-VDISTMLEEAVQYVKFLQVQI 297
Query: 204 EFLS 207
+ LS
Sbjct: 298 KLLS 301
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
H+L+E+ RR KINE+++ LQ ++P KT + MLDE I Y++ LQ QV+ L++
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQTLAV 151
>gi|147768917|emb|CAN66981.1| hypothetical protein VITISV_004454 [Vitis vinifera]
Length = 282
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 152 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLT 211
D S+A R RR +I+E++R LQ +VPG K M MLDE I+YV L+ Q E+ T
Sbjct: 107 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIHYVXFLKTQTEWPRTTCT 165
Query: 212 AASTFYDFNSESDAVETMQK--------AKAYKAKEMERLMKE 246
S F D ET +K A+ + ++ME+ +E
Sbjct: 166 QQSVFL-----GDVRETKRKHGKPGNLLARFPRTRKMEKKTRE 203
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
H+L+E+ RR KINE+++ LQ ++P KT + MLDE I Y++ LQ QV+ L++
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQTLAV 151
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
++D ++A R+RR +++ERLR LQ +VPG K M MLDE +Y++ L++Q+E L
Sbjct: 302 SSDPQTVAARLRRERVSERLRVLQRLVPGGSK-MDTATMLDEAASYLKFLKSQLEAL 357
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 151 TDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS--- 207
TD SL R RR KINERL+ LQ++VP K + ++ ML+E ++Y++ +Q Q++ LS
Sbjct: 254 TDPQSLYARKRREKINERLKVLQNLVPNGTK-VDISTMLEEAVHYIKFMQLQIKLLSSDD 312
Query: 208 MKLTAASTFYDFN 220
M + A + FN
Sbjct: 313 MWMFAPIAYNGFN 325
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMK 209
H+L+E+ RR +INE+++ LQ +VP KT + MLD+ I Y++ LQ QV+ LSM+
Sbjct: 70 HNLSEKRRRCRINEKMKALQSLVPNSSKTDKAS-MLDDAIEYLKQLQLQVQMLSMR 124
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 154 HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSM 208
H+L+E+ RR KINE+++ LQ ++P KT + MLDE I Y++ LQ QV+ L++
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKAS-MLDEAIEYLKQLQLQVQTLAV 151
>gi|79331774|ref|NP_001032117.1| transcription factor PIF7 [Arabidopsis thaliana]
gi|9757848|dbj|BAB08482.1| unnamed protein product [Arabidopsis thaliana]
gi|45935023|gb|AAS79546.1| At5g61270 [Arabidopsis thaliana]
gi|46367462|emb|CAG25857.1| hypothetical protein [Arabidopsis thaliana]
gi|332010063|gb|AED97446.1| transcription factor PIF7 [Arabidopsis thaliana]
Length = 278
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 133 EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEI 192
E+E E RRG+A H+ +ER RR +IN+R+R LQ ++P K ++ +LD++
Sbjct: 62 EQETRGEAGRSNGRRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVS-ILDDV 120
Query: 193 INYVQSLQNQVEFLSMK 209
I +++ LQ QV+F+S++
Sbjct: 121 IEHLKQLQAQVQFMSLR 137
>gi|55908877|gb|AAV67820.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
++D ++A R+RR +++ERLR LQ +VPG K M MLDE +Y++ L++Q+E L
Sbjct: 304 SSDPQTVAARLRRERVSERLRVLQRLVPGGSK-MDTATMLDEAASYLKFLKSQLEAL 359
>gi|32527639|gb|AAP86213.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 277
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 133 EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEI 192
E+E E RRG+A H+ +ER RR +IN+R+R LQ ++P K ++ +LD++
Sbjct: 62 EQETRGEAGRSNGRRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVS-ILDDV 120
Query: 193 INYVQSLQNQVEFLSMK 209
I +++ LQ QV+F+S++
Sbjct: 121 IEHLKQLQAQVQFMSLR 137
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 152 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
D S+A R RR +I+ER++ LQ +VPG K M MLDE I+YV+ L+ QV+ L
Sbjct: 139 DPQSVAARHRRERISERIKILQRLVPGGTK-MDTASMLDEAIHYVKFLKKQVQTL 192
>gi|62318640|dbj|BAD95106.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 278
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 133 EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEI 192
E+E E RRG+A H+ +ER RR +IN+R+R LQ ++P K ++ +LD++
Sbjct: 62 EQETRGEAGRSNGRRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVS-ILDDV 120
Query: 193 INYVQSLQNQVEFLSMK 209
I +++ LQ QV+F+S++
Sbjct: 121 IEHLKQLQAQVQFMSLR 137
>gi|42568685|ref|NP_200935.2| transcription factor PIF7 [Arabidopsis thaliana]
gi|182676517|sp|Q570R7.2|PIF7_ARATH RecName: Full=Transcription factor PIF7; AltName: Full=Basic
helix-loop-helix protein 72; Short=AtbHLH72; Short=bHLH
72; AltName: Full=Phytochrome-interacting factor 7;
AltName: Full=Transcription factor EN 109; AltName:
Full=bHLH transcription factor bHLH072
gi|225879146|dbj|BAH30643.1| hypothetical protein [Arabidopsis thaliana]
gi|332010062|gb|AED97445.1| transcription factor PIF7 [Arabidopsis thaliana]
Length = 366
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 133 EEEKSKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEI 192
E+E E RRG+A H+ +ER RR +IN+R+R LQ ++P K ++ +LD++
Sbjct: 150 EQETRGEAGRSNGRRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVS-ILDDV 208
Query: 193 INYVQSLQNQVEFLSMK 209
I +++ LQ QV+F+S++
Sbjct: 209 IEHLKQLQAQVQFMSLR 225
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 151 TDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
+D ++A R+RR +++ERLR LQ +VPG K M MLDE +Y++ L++QV+ L
Sbjct: 294 SDPQTVAARLRRERVSERLRVLQKLVPGGSK-MDTASMLDEAASYLKFLKSQVQAL 348
>gi|356567480|ref|XP_003551947.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 397
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 21/133 (15%)
Query: 85 STKCESKNRKAVEISESSNEDSSPVSEIETNKRKKNSGRRKRVKGNEKEEEKSKEVVHVR 144
ST+ + + RK +++ ES E+ S +E+++ K+S R
Sbjct: 157 STRNQGQKRKGIDVEES--EEQSEDTELKSALGNKSSQRAGL------------------ 196
Query: 145 ARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVE 204
ARR +A + H+L+ER RR +INE+++ LQ ++P KT + ML+E I Y++SLQ Q++
Sbjct: 197 ARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKAS-MLEEAIEYLKSLQLQLQ 255
Query: 205 FLSMKLTAASTFY 217
+ M A +
Sbjct: 256 LMWMGSGMAPIMF 268
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 152 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
D S+A R RR +I+E++R LQ +VPG K M MLDE I YV+ L+ Q+ FL
Sbjct: 127 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRFL 180
>gi|217074640|gb|ACJ85680.1| unknown [Medicago truncatula]
gi|388490634|gb|AFK33383.1| unknown [Medicago truncatula]
Length = 335
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 146 RRGQATDS-------HSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQS 198
+ G+ATD HS+ E+ RR KINER + L+D++P C + L E+I YVQ
Sbjct: 34 KDGKATDKASVIRSKHSVTEQRRRSKINERFQILRDLIPQCDQKRDTASFLLEVIEYVQY 93
Query: 199 LQNQVE 204
LQ +V+
Sbjct: 94 LQERVQ 99
>gi|77556222|gb|ABA99018.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125579480|gb|EAZ20626.1| hypothetical protein OsJ_36241 [Oryza sativa Japonica Group]
Length = 198
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 104 EDSSPVSEIET---NKRKKNSGRRKRVKGNEKEEEKSKEVVHVRARRG-QATDSHSLAER 159
+D S VS ET NKRK + N +E ++K V + A S S +
Sbjct: 65 QDDSFVSAEETTIGNKRKVQMDTENELMTNRSKEVRTKMSVSKACKHSVSAESSQSYYAK 124
Query: 160 VRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207
RR +INERLR LQ+++P K + ++ ML+E I YV+ L Q++ LS
Sbjct: 125 NRRQRINERLRILQELIPNGTK-VDISTMLEEAIQYVKFLHLQIKLLS 171
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFL 206
+ + S+A R RR KI+ER+R L+ ++PG K M MLDE I YV+ LQ QV+ L
Sbjct: 387 SVEPQSVAARHRRKKISERIRVLEKLIPGGNK-MDTATMLDEAIEYVKFLQLQVQIL 442
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 151 TDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKL 210
+D ++A R+RR +++ERLR LQ +VPG K M MLDE +Y++ L++QV+ L
Sbjct: 293 SDPQTVAARLRRERVSERLRVLQKLVPGGSK-MDTASMLDEAASYLKFLKSQVQALETLG 351
Query: 211 TAAST 215
T +T
Sbjct: 352 TTTAT 356
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.128 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,741,695,442
Number of Sequences: 23463169
Number of extensions: 147443718
Number of successful extensions: 827975
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 1579
Number of HSP's that attempted gapping in prelim test: 823559
Number of HSP's gapped (non-prelim): 4533
length of query: 264
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 124
effective length of database: 9,074,351,707
effective search space: 1125219611668
effective search space used: 1125219611668
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)