Query 024653
Match_columns 264
No_of_seqs 204 out of 738
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 12:05:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024653.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024653hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ati_A MITF, microphthalmia-as 99.8 1.8E-20 6.3E-25 152.3 6.1 99 140-248 17-118 (118)
2 1am9_A Srebp-1A, protein (ster 99.7 7.3E-18 2.5E-22 128.9 3.9 63 151-213 7-69 (82)
3 4h10_B Circadian locomoter out 99.6 2.6E-16 8.8E-21 118.7 3.3 57 151-207 9-65 (71)
4 1a0a_A BHLH, protein (phosphat 99.6 3.9E-16 1.3E-20 114.6 2.4 54 151-204 3-62 (63)
5 1an4_A Protein (upstream stimu 99.6 5.1E-16 1.7E-20 113.2 2.3 56 149-204 4-64 (65)
6 4h10_A ARYL hydrocarbon recept 99.5 1.1E-15 3.7E-20 115.5 0.4 52 150-201 9-63 (73)
7 1hlo_A Protein (transcription 99.5 2.1E-14 7.2E-19 108.7 5.4 61 152-212 14-75 (80)
8 1nkp_B MAX protein, MYC proto- 99.5 2.6E-14 8.8E-19 108.6 5.6 60 152-212 4-65 (83)
9 1nkp_A C-MYC, MYC proto-oncoge 99.4 8.3E-14 2.9E-18 107.9 5.6 59 153-211 9-69 (88)
10 3u5v_A Protein MAX, transcript 99.4 9.8E-14 3.4E-18 105.4 3.3 56 152-207 7-65 (76)
11 4ath_A MITF, microphthalmia-as 99.4 1.1E-12 3.6E-17 101.8 9.0 78 161-248 3-83 (83)
12 1nlw_A MAD protein, MAX dimeri 99.3 7.5E-12 2.6E-16 95.6 6.6 59 153-211 4-64 (80)
13 4f3l_A Mclock, circadian locom 99.0 1.3E-10 4.3E-15 106.3 5.4 55 149-203 11-65 (361)
14 1mdy_A Protein (MYOD BHLH doma 99.0 2.5E-10 8.7E-15 85.0 4.1 52 153-204 15-67 (68)
15 2ql2_B Neurod1, neurogenic dif 98.9 8.4E-10 2.9E-14 80.3 4.8 52 153-204 5-58 (60)
16 4f3l_B BMAL1B; BHLH, PAS, circ 98.9 3.8E-10 1.3E-14 104.5 2.8 54 148-202 11-68 (387)
17 2lfh_A DNA-binding protein inh 98.5 6.5E-08 2.2E-12 72.6 3.7 47 155-201 19-67 (68)
18 4aya_A DNA-binding protein inh 97.9 2E-05 6.9E-10 62.6 5.8 49 158-206 33-83 (97)
19 2er8_A Regulatory protein Leu3 38.6 23 0.00077 24.6 2.9 21 193-213 48-68 (72)
20 1zme_C Proline utilization tra 31.7 25 0.00086 24.0 2.2 20 194-213 44-63 (70)
21 2jee_A YIIU; FTSZ, septum, coi 29.1 50 0.0017 25.1 3.6 25 189-213 15-39 (81)
22 1g70_B RSG-1.2 peptide; peptid 28.8 22 0.00077 21.6 1.2 11 154-164 9-19 (26)
23 2wt7_A Proto-oncogene protein 28.6 1E+02 0.0036 21.5 5.0 40 158-211 1-40 (63)
24 1hwt_C Protein (heme activator 24.5 40 0.0014 23.7 2.2 21 193-213 57-77 (81)
25 3muj_A Transcription factor CO 23.5 85 0.0029 26.1 4.2 36 164-199 95-133 (138)
26 1m2x_A Class B carbapenemase B 22.5 41 0.0014 27.2 2.1 32 173-205 190-221 (223)
27 2wuj_A Septum site-determining 21.3 1.1E+02 0.0036 21.3 3.8 30 185-214 25-54 (57)
28 1p3q_Q VPS9P, vacuolar protein 21.1 90 0.0031 22.0 3.4 26 156-181 3-28 (54)
29 1tue_B Regulatory protein E2; 20.9 1.2E+02 0.004 27.0 4.8 92 163-258 9-100 (218)
No 1
>4ati_A MITF, microphthalmia-associated transcription factor; DNA-binding protein-DNA complex, melanoma; 2.60A {Mus musculus} PDB: 4atk_A
Probab=99.81 E-value=1.8e-20 Score=152.29 Aligned_cols=99 Identities=21% Similarity=0.325 Sum_probs=52.0
Q ss_pred hhhhhhccCCcCCccchHHHhhhhhhhHHHHHhhhcCCCCCc---CCChhchHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 024653 140 VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYK---TMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTF 216 (264)
Q Consensus 140 ~~~~Rarrg~a~~sHs~aERrRRekIneri~~Lr~LVP~~~K---k~dKAsIL~eAI~YIK~LQ~QV~~Ls~~l~a~~~~ 216 (264)
.....+++++++.+|+++||+||++||++|.+|++|||+|.+ +++|++||++||+||++||.+++.|....
T Consensus 17 ~~~~~~k~~~kr~~Hn~~ERrRR~~In~~~~~L~~lvP~~~~~~~k~~Ka~IL~~aieYIk~Lq~~~~~l~~~~------ 90 (118)
T 4ati_A 17 EARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKDLE------ 90 (118)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHSCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred hHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 344567777788899999999999999999999999999853 47899999999999999999999998543
Q ss_pred cccCCCchhHHHHHHHhhhhhHHHHHHHHhcC
Q 024653 217 YDFNSESDAVETMQKAKAYKAKEMERLMKEGN 248 (264)
Q Consensus 217 ~~~~~~~~~~e~~q~a~~~~~~e~e~~~r~~g 248 (264)
.+.+.++..+..+...++|+|++++.||
T Consensus 91 ----~~~~~l~~~n~~L~~riqeLE~~a~~~g 118 (118)
T 4ati_A 91 ----NRQKKLEHANRHLLLRVQELEMQARAHG 118 (118)
T ss_dssp ----C---------------------------
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3345667778888889999999999887
No 2
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=99.69 E-value=7.3e-18 Score=128.88 Aligned_cols=63 Identities=24% Similarity=0.372 Sum_probs=57.8
Q ss_pred CCccchHHHhhhhhhhHHHHHhhhcCCCCCcCCChhchHHHHHHHHHHHHHHHHHHHhhhhhc
Q 024653 151 TDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAA 213 (264)
Q Consensus 151 ~~sHs~aERrRRekIneri~~Lr~LVP~~~Kk~dKAsIL~eAI~YIK~LQ~QV~~Ls~~l~a~ 213 (264)
+.+|+++||+||++||++|.+|++|||+++.++||++||++||+||++||.+++.|+.+..++
T Consensus 7 r~~H~~~ErrRR~~in~~f~~L~~lvP~~~~k~~Ka~IL~~Ai~YI~~Lq~~~~~L~~e~~~L 69 (82)
T 1am9_A 7 RTAHNAIEKRYRSSINDKIIELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLSL 69 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357999999999999999999999999996568999999999999999999999999777653
No 3
>4h10_B Circadian locomoter output cycles protein kaput; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens}
Probab=99.60 E-value=2.6e-16 Score=118.70 Aligned_cols=57 Identities=21% Similarity=0.411 Sum_probs=52.2
Q ss_pred CCccchHHHhhhhhhhHHHHHhhhcCCCCCcCCChhchHHHHHHHHHHHHHHHHHHH
Q 024653 151 TDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLS 207 (264)
Q Consensus 151 ~~sHs~aERrRRekIneri~~Lr~LVP~~~Kk~dKAsIL~eAI~YIK~LQ~QV~~Ls 207 (264)
+.+|+++||+||++||++|.+|+.|||++..++||++||+.||+||+.||.++.-|+
T Consensus 9 R~~Hn~iErrRRd~IN~~i~eL~~LvP~~~~K~dK~sIL~~aI~yik~Lq~~~~~~~ 65 (71)
T 4h10_B 9 RVSRNKSEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKHKEITAWLE 65 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSSSCCSCCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hhhhhHHHhhHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhhhHHH
Confidence 347999999999999999999999999876558999999999999999999988764
No 4
>1a0a_A BHLH, protein (phosphate system positive regulatory protein PHO4); transcription factor, basic helix loop helix; HET: DNA; 2.80A {Saccharomyces cerevisiae} SCOP: a.38.1.1
Probab=99.58 E-value=3.9e-16 Score=114.57 Aligned_cols=54 Identities=24% Similarity=0.433 Sum_probs=48.3
Q ss_pred CCccchHHHhhhhhhhHHHHHhhhcCCCCCc------CCChhchHHHHHHHHHHHHHHHH
Q 024653 151 TDSHSLAERVRRGKINERLRCLQDIVPGCYK------TMGMTMMLDEIINYVQSLQNQVE 204 (264)
Q Consensus 151 ~~sHs~aERrRRekIneri~~Lr~LVP~~~K------k~dKAsIL~eAI~YIK~LQ~QV~ 204 (264)
+.+|+++||+||++||+.|..|+.|||+|.+ +++||+||+.||+||+.||++|+
T Consensus 3 r~~H~~aEr~RR~rIn~~~~~L~~LlP~~~~~~~~~~k~sKa~iL~~Ai~YIk~Lq~~~~ 62 (63)
T 1a0a_A 3 RESHKHAEQARRNRLAVALHELASLIPAEWKQQNVSAAPSKATTVEAACRYIRHLQQNGS 62 (63)
T ss_dssp TTGGGGGTHHHHHHHHHHHHHHHHTSCHHHHTSSCCCCSCTTHHHHHHHHHHHHHHTCSC
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHCCCcccccccCCcccHHHHHHHHHHHHHHHHHHhh
Confidence 4689999999999999999999999997633 35799999999999999998764
No 5
>1an4_A Protein (upstream stimulatory factor); protein-DNA complex, double helix, overhanging base, transcription/DNA complex; HET: DNA; 2.90A {Homo sapiens} SCOP: a.38.1.1
Probab=99.57 E-value=5.1e-16 Score=113.16 Aligned_cols=56 Identities=27% Similarity=0.383 Sum_probs=50.3
Q ss_pred CcCCccchHHHhhhhhhhHHHHHhhhcCCCCCc-----CCChhchHHHHHHHHHHHHHHHH
Q 024653 149 QATDSHSLAERVRRGKINERLRCLQDIVPGCYK-----TMGMTMMLDEIINYVQSLQNQVE 204 (264)
Q Consensus 149 ~a~~sHs~aERrRRekIneri~~Lr~LVP~~~K-----k~dKAsIL~eAI~YIK~LQ~QV~ 204 (264)
....+|+++||+||++||+.|..|+.|||+|.. +++|++||++||+||+.||.+++
T Consensus 4 ~rr~~H~~~Er~RR~~in~~~~~L~~lvP~~~~~~~~~k~~Ka~IL~~ai~YI~~Lq~~~~ 64 (65)
T 1an4_A 4 KRRAQHNEVERRRRDKINNWIVQLSKIIPDSSMESTKSGQSKGGILSKASDYIQELRQSNH 64 (65)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHSCCCCCCSSTTCCCTTTTTTTTHHHHHHHHTTTC
T ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHHCcCcccccccCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 445689999999999999999999999999872 37999999999999999998753
No 6
>4h10_A ARYL hydrocarbon receptor nuclear translocator-LI 1; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens}
Probab=99.52 E-value=1.1e-15 Score=115.53 Aligned_cols=52 Identities=27% Similarity=0.486 Sum_probs=46.8
Q ss_pred cCCccchHHHhhhhhhhHHHHHhhhcCCCCC---cCCChhchHHHHHHHHHHHHH
Q 024653 150 ATDSHSLAERVRRGKINERLRCLQDIVPGCY---KTMGMTMMLDEIINYVQSLQN 201 (264)
Q Consensus 150 a~~sHs~aERrRRekIneri~~Lr~LVP~~~---Kk~dKAsIL~eAI~YIK~LQ~ 201 (264)
++.+|+++||+||++||+.|.+|+.|||.|. .++|||+||+.||+||+.||.
T Consensus 9 rR~~H~~~ERrRR~rIN~~l~eL~~LvP~~~~~~~KldKasIL~~tV~ylk~l~~ 63 (73)
T 4h10_A 9 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 63 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHTCSSCCCHHHHHHHHHHHHHHHSC
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHhc
Confidence 3458999999999999999999999999883 338999999999999999974
No 7
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1
Probab=99.49 E-value=2.1e-14 Score=108.70 Aligned_cols=61 Identities=23% Similarity=0.396 Sum_probs=55.7
Q ss_pred CccchHHHhhhhhhhHHHHHhhhcCCCCC-cCCChhchHHHHHHHHHHHHHHHHHHHhhhhh
Q 024653 152 DSHSLAERVRRGKINERLRCLQDIVPGCY-KTMGMTMMLDEIINYVQSLQNQVEFLSMKLTA 212 (264)
Q Consensus 152 ~sHs~aERrRRekIneri~~Lr~LVP~~~-Kk~dKAsIL~eAI~YIK~LQ~QV~~Ls~~l~a 212 (264)
..|+.+||+||..||+.|..|+.+||.+. .+++|++||..||+||+.||.+++.|+.++..
T Consensus 14 ~~hn~~Er~RR~~in~~f~~Lr~lvP~~~~~k~sK~~iL~~Ai~YI~~L~~~~~~L~~e~~~ 75 (80)
T 1hlo_A 14 AHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDIDD 75 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSGGGTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHCcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999999999999999999999873 23799999999999999999999999987765
No 8
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=99.48 E-value=2.6e-14 Score=108.59 Aligned_cols=60 Identities=25% Similarity=0.407 Sum_probs=54.3
Q ss_pred CccchHHHhhhhhhhHHHHHhhhcCCCC--CcCCChhchHHHHHHHHHHHHHHHHHHHhhhhh
Q 024653 152 DSHSLAERVRRGKINERLRCLQDIVPGC--YKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTA 212 (264)
Q Consensus 152 ~sHs~aERrRRekIneri~~Lr~LVP~~--~Kk~dKAsIL~eAI~YIK~LQ~QV~~Ls~~l~a 212 (264)
..|+..||+||++||+.|..|+++||.+ .| ++|++||..||+||+.|+.+++.|+.++..
T Consensus 4 ~~hn~~Er~RR~~in~~f~~Lr~lvP~~~~~k-~sK~~iL~~Ai~YI~~L~~~~~~l~~e~~~ 65 (83)
T 1nkp_B 4 AHHNALERKRRDHIKDSFHSLRDSVPSLQGEK-ASRAQILDKATEYIQYMRRKNHTHQQDIDD 65 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSGGGTTSC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999999999985 45 799999999999999999999999865543
No 9
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=99.44 E-value=8.3e-14 Score=107.95 Aligned_cols=59 Identities=22% Similarity=0.356 Sum_probs=53.3
Q ss_pred ccchHHHhhhhhhhHHHHHhhhcCCCCC--cCCChhchHHHHHHHHHHHHHHHHHHHhhhh
Q 024653 153 SHSLAERVRRGKINERLRCLQDIVPGCY--KTMGMTMMLDEIINYVQSLQNQVEFLSMKLT 211 (264)
Q Consensus 153 sHs~aERrRRekIneri~~Lr~LVP~~~--Kk~dKAsIL~eAI~YIK~LQ~QV~~Ls~~l~ 211 (264)
.|+..||+||++||+.|..|+++||.+. .+++|++||..||+||++|+.+.+.+.....
T Consensus 9 ~Hn~~ER~RR~~ln~~f~~Lr~~vP~~~~~~K~sK~~iL~~A~~YI~~L~~~~~~l~~~~~ 69 (88)
T 1nkp_A 9 THNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEED 69 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCGGGTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6999999999999999999999999863 3479999999999999999999998876543
No 10
>3u5v_A Protein MAX, transcription factor E2-alpha chimer; basic helix-loop-helix (BHLH); 1.70A {Mus musculus} PDB: 2ql2_A*
Probab=99.40 E-value=9.8e-14 Score=105.41 Aligned_cols=56 Identities=27% Similarity=0.330 Sum_probs=48.9
Q ss_pred CccchHHHhhhhhhhHHHHHhhhcCCC---CCcCCChhchHHHHHHHHHHHHHHHHHHH
Q 024653 152 DSHSLAERVRRGKINERLRCLQDIVPG---CYKTMGMTMMLDEIINYVQSLQNQVEFLS 207 (264)
Q Consensus 152 ~sHs~aERrRRekIneri~~Lr~LVP~---~~Kk~dKAsIL~eAI~YIK~LQ~QV~~Ls 207 (264)
..|+..||+||+.||+.|..|+.+||. +.|..+|+.||..||+||++||.+|++++
T Consensus 7 ~~hN~~ER~Rr~~IN~~f~~Lr~~vP~~~~~~K~~sK~~IL~~AieYI~~Lq~~l~e~~ 65 (76)
T 3u5v_A 7 AHHNALERKRRRDINEAFRELGRMCQMHLKSDKAQTKLLILQQAVQVILGLEQQVRERN 65 (76)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhchHHHhhhHHHHHHHHHHHHHHcCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 479999999999999999999999995 34534688999999999999999999875
No 11
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=99.39 E-value=1.1e-12 Score=101.84 Aligned_cols=78 Identities=17% Similarity=0.273 Sum_probs=67.8
Q ss_pred hhhhhhHHHHHhhhcCCCCCc---CCChhchHHHHHHHHHHHHHHHHHHHhhhhhcccccccCCCchhHHHHHHHhhhhh
Q 024653 161 RRGKINERLRCLQDIVPGCYK---TMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETMQKAKAYKA 237 (264)
Q Consensus 161 RRekIneri~~Lr~LVP~~~K---k~dKAsIL~eAI~YIK~LQ~QV~~Ls~~l~a~~~~~~~~~~~~~~e~~q~a~~~~~ 237 (264)
-|..||++|.+|..|||.+.. +++|++||..||+||++||..++.+..... ....++..++....++
T Consensus 3 ~R~nIN~~I~EL~~LiP~~~~~~~k~nKg~IL~ksvdYI~~Lq~e~~r~~e~e~----------r~k~le~~n~~l~~ri 72 (83)
T 4ath_A 3 MRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKDLEN----------RQKKLEHANRHLLLRV 72 (83)
T ss_dssp CHHHHHHHHHHHHHHSCCCCCTTCCCSHHHHHHHHHHHHHHHHHTHHHHHHHHH----------HHHHHHHHHHHHHHHH
T ss_pred chhhHHHhhhhhhccCCCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHhhhhhHHHHHHH
Confidence 488999999999999998642 369999999999999999999988875543 3677889999999999
Q ss_pred HHHHHHHHhcC
Q 024653 238 KEMERLMKEGN 248 (264)
Q Consensus 238 ~e~e~~~r~~g 248 (264)
+|+|++|+.||
T Consensus 73 qELE~qa~~hg 83 (83)
T 4ath_A 73 QELEMQARAHG 83 (83)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHcC
Confidence 99999999987
No 12
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=99.26 E-value=7.5e-12 Score=95.62 Aligned_cols=59 Identities=17% Similarity=0.188 Sum_probs=52.5
Q ss_pred ccchHHHhhhhhhhHHHHHhhhcCCCCC--cCCChhchHHHHHHHHHHHHHHHHHHHhhhh
Q 024653 153 SHSLAERVRRGKINERLRCLQDIVPGCY--KTMGMTMMLDEIINYVQSLQNQVEFLSMKLT 211 (264)
Q Consensus 153 sHs~aERrRRekIneri~~Lr~LVP~~~--Kk~dKAsIL~eAI~YIK~LQ~QV~~Ls~~l~ 211 (264)
.|+..||+||..||+.|..|+++||.+. .+++|+.||..||+||+.|+.+.+.|..+..
T Consensus 4 ~HN~~ER~RR~~lk~~f~~Lr~~vP~~~~~~k~sk~~iL~kA~~yI~~L~~~~~~l~~e~~ 64 (80)
T 1nlw_A 4 THNEMEKNRRAHLRLSLEKLKGLVPLGPDSSRHTTLSLLTKAKLHIKKLEDSDRKAVHQID 64 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCCSSSCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6999999999999999999999999652 2368999999999999999999998876543
No 13
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.05 E-value=1.3e-10 Score=106.29 Aligned_cols=55 Identities=20% Similarity=0.387 Sum_probs=42.6
Q ss_pred CcCCccchHHHhhhhhhhHHHHHhhhcCCCCCcCCChhchHHHHHHHHHHHHHHH
Q 024653 149 QATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQV 203 (264)
Q Consensus 149 ~a~~sHs~aERrRRekIneri~~Lr~LVP~~~Kk~dKAsIL~eAI~YIK~LQ~QV 203 (264)
..+.+|+++||+||++||+.|.+|+.|||....++||++||..||+|||.|+...
T Consensus 11 ~~~~~~~~~e~~rr~~~n~~~~~l~~~~p~~~~~~dk~~il~~~~~~~~~~~~~~ 65 (361)
T 4f3l_A 11 AKRVSRNKSEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKHKETT 65 (361)
T ss_dssp --------CHHHHHHHHHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHHHHHhhc
Confidence 3445799999999999999999999999955444899999999999999998653
No 14
>1mdy_A Protein (MYOD BHLH domain); protein-DNA complex, transcription/DNA complex; HET: DNA; 2.80A {Mus musculus} SCOP: a.38.1.1 PDB: 1mdy_B*
Probab=98.99 E-value=2.5e-10 Score=85.02 Aligned_cols=52 Identities=23% Similarity=0.379 Sum_probs=47.0
Q ss_pred ccchHHHhhhhhhhHHHHHhhhcCCCC-CcCCChhchHHHHHHHHHHHHHHHH
Q 024653 153 SHSLAERVRRGKINERLRCLQDIVPGC-YKTMGMTMMLDEIINYVQSLQNQVE 204 (264)
Q Consensus 153 sHs~aERrRRekIneri~~Lr~LVP~~-~Kk~dKAsIL~eAI~YIK~LQ~QV~ 204 (264)
.|+..||+|+..||+.|..|+++||.. +++++|..||..||+||.+||..++
T Consensus 15 ~aN~rER~R~~~iN~af~~LR~~iP~~~~~KlSKi~tLr~Ai~YI~~L~~~L~ 67 (68)
T 1mdy_A 15 AATMRERRRLSKVNEAFETLKRSTSSNPNQRLPKVEILRNAIRYIEGLQALLR 67 (68)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCSCTTSCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHc
Confidence 599999999999999999999999964 3458999999999999999998653
No 15
>2ql2_B Neurod1, neurogenic differentiation factor 1; basic-helix-loop-helix; HET: DNA; 2.50A {Mus musculus}
Probab=98.93 E-value=8.4e-10 Score=80.28 Aligned_cols=52 Identities=23% Similarity=0.292 Sum_probs=47.1
Q ss_pred ccchHHHhhhhhhhHHHHHhhhcCCCC--CcCCChhchHHHHHHHHHHHHHHHH
Q 024653 153 SHSLAERVRRGKINERLRCLQDIVPGC--YKTMGMTMMLDEIINYVQSLQNQVE 204 (264)
Q Consensus 153 sHs~aERrRRekIneri~~Lr~LVP~~--~Kk~dKAsIL~eAI~YIK~LQ~QV~ 204 (264)
.|+.-||+|+..||+.|..|+.+||.. +++++|..+|..||+||..||..++
T Consensus 5 ~~N~rER~R~~~iN~af~~LR~~lP~~~~~~klSKi~tLr~Ai~YI~~L~~~L~ 58 (60)
T 2ql2_B 5 KANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILR 58 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSCCSSSCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHccCCCCcCcCCHHHHHHHHHHHHHHHHHHHh
Confidence 488999999999999999999999964 4568999999999999999998764
No 16
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=98.90 E-value=3.8e-10 Score=104.54 Aligned_cols=54 Identities=26% Similarity=0.394 Sum_probs=47.5
Q ss_pred CCcCCccchHHHhhhhhhhHHHHHhhhcCCC----CCcCCChhchHHHHHHHHHHHHHH
Q 024653 148 GQATDSHSLAERVRRGKINERLRCLQDIVPG----CYKTMGMTMMLDEIINYVQSLQNQ 202 (264)
Q Consensus 148 g~a~~sHs~aERrRRekIneri~~Lr~LVP~----~~Kk~dKAsIL~eAI~YIK~LQ~Q 202 (264)
++++++|+.+||+||++||+.|.+|+.|||. ..| +||++||..||+|||.|+..
T Consensus 11 ~~~~~~~~~~ek~rR~~~n~~~~~L~~l~p~~~~~~~k-~dk~~il~~~~~~l~~~~~~ 68 (387)
T 4f3l_B 11 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK-LDKLTVLRMAVQHMKTLRGA 68 (387)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCSSC-CCHHHHHHHHHHHHHHHHCC
T ss_pred hhhcccccchhhcchHHHHHHHHHHHHhcCCCCccccc-cCHHHHHHHHHHHHHHhhcc
Confidence 3345689999999999999999999999994 456 79999999999999999853
No 17
>2lfh_A DNA-binding protein inhibitor ID-3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=98.50 E-value=6.5e-08 Score=72.57 Aligned_cols=47 Identities=21% Similarity=0.350 Sum_probs=41.5
Q ss_pred chHHHhhhhhhhHHHHHhhhcCCCC--CcCCChhchHHHHHHHHHHHHH
Q 024653 155 SLAERVRRGKINERLRCLQDIVPGC--YKTMGMTMMLDEIINYVQSLQN 201 (264)
Q Consensus 155 s~aERrRRekIneri~~Lr~LVP~~--~Kk~dKAsIL~eAI~YIK~LQ~ 201 (264)
+.-||+|...||+.|..||.+||.. +++++|..+|.-||+||..||.
T Consensus 19 ~erER~Rm~~lN~aF~~LR~~VP~~p~~kKLSKiEtLr~Ai~YI~~Lq~ 67 (68)
T 2lfh_A 19 AEEPLSLLDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQV 67 (68)
T ss_dssp BCCCSCSSSHHHHHHHHHHHHCCCCCTTCCCCHHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHHHHHHHCCCCCCCCCccHHHHHHHHHHHHHHHHc
Confidence 3458999999999999999999964 4558999999999999999984
No 18
>4aya_A DNA-binding protein inhibitor ID-2; cell cycle; 2.10A {Homo sapiens}
Probab=97.86 E-value=2e-05 Score=62.59 Aligned_cols=49 Identities=20% Similarity=0.305 Sum_probs=42.8
Q ss_pred HHhhhhhhhHHHHHhhhcCCCC--CcCCChhchHHHHHHHHHHHHHHHHHH
Q 024653 158 ERVRRGKINERLRCLQDIVPGC--YKTMGMTMMLDEIINYVQSLQNQVEFL 206 (264)
Q Consensus 158 ERrRRekIneri~~Lr~LVP~~--~Kk~dKAsIL~eAI~YIK~LQ~QV~~L 206 (264)
||.|=..||+.|..||.+||.. ++++.|..+|.-||+||..||..++.-
T Consensus 33 ~r~Rm~~lN~AF~~LR~~vP~~p~~kKLSKIETLRlAi~YI~~Lq~~L~~~ 83 (97)
T 4aya_A 33 PMSLLYNMNDCYSKLKELVPSIPQNKKVSKMEILQHVIDYILDLQIALDSH 83 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCSSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 4677788999999999999964 556899999999999999999988753
No 19
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=38.64 E-value=23 Score=24.57 Aligned_cols=21 Identities=14% Similarity=0.148 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhc
Q 024653 193 INYVQSLQNQVEFLSMKLTAA 213 (264)
Q Consensus 193 I~YIK~LQ~QV~~Ls~~l~a~ 213 (264)
-.||..|+.+|+.|+..|..+
T Consensus 48 ~~~~~~Le~ri~~Le~~l~~l 68 (72)
T 2er8_A 48 RARNEAIEKRFKELTRTLTNL 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999999888764
No 20
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=31.73 E-value=25 Score=24.04 Aligned_cols=20 Identities=20% Similarity=0.238 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHhhhhhc
Q 024653 194 NYVQSLQNQVEFLSMKLTAA 213 (264)
Q Consensus 194 ~YIK~LQ~QV~~Ls~~l~a~ 213 (264)
.||..|+.+|+.|+..+..+
T Consensus 44 ~~~~~L~~ri~~Le~~l~~l 63 (70)
T 1zme_C 44 KYLQQLQKDLNDKTEENNRL 63 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 47777777777777666554
No 21
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=29.05 E-value=50 Score=25.13 Aligned_cols=25 Identities=24% Similarity=0.276 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhc
Q 024653 189 LDEIINYVQSLQNQVEFLSMKLTAA 213 (264)
Q Consensus 189 L~eAI~YIK~LQ~QV~~Ls~~l~a~ 213 (264)
++.||+-|.-||..|++|+.+..++
T Consensus 15 Iq~avdtI~lLqmEieELKekN~~L 39 (81)
T 2jee_A 15 VQQAIDTITLLQMEIEELKEKNNSL 39 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999999887653
No 22
>1g70_B RSG-1.2 peptide; peptide-RNA complex, non-canonical base pairs, viral protein/RNA complex; NMR {Human immunodeficiency virus 1} SCOP: j.9.3.1
Probab=28.77 E-value=22 Score=21.56 Aligned_cols=11 Identities=55% Similarity=0.407 Sum_probs=7.6
Q ss_pred cchHHHhhhhh
Q 024653 154 HSLAERVRRGK 164 (264)
Q Consensus 154 Hs~aERrRRek 164 (264)
-+-+||+||..
T Consensus 9 psgaerrrrra 19 (26)
T 1g70_B 9 PSGAERRRRRA 19 (26)
T ss_pred CchHHHHHHHH
Confidence 46688888743
No 23
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=28.59 E-value=1e+02 Score=21.50 Aligned_cols=40 Identities=13% Similarity=0.157 Sum_probs=23.6
Q ss_pred HHhhhhhhhHHHHHhhhcCCCCCcCCChhchHHHHHHHHHHHHHHHHHHHhhhh
Q 024653 158 ERVRRGKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLT 211 (264)
Q Consensus 158 ERrRRekIneri~~Lr~LVP~~~Kk~dKAsIL~eAI~YIK~LQ~QV~~Ls~~l~ 211 (264)
||++|.+...++.+.+. . ..-.+|+..|+.+|+.|+....
T Consensus 1 Ekr~rrrerNR~AA~rc-----R---------~rKk~~~~~Le~~v~~L~~~n~ 40 (63)
T 2wt7_A 1 EKRRIRRERNKMAAAKC-----R---------NRRRELTDTLQAETDQLEDEKS 40 (63)
T ss_dssp CHHHHHHHHHHHHHHHH-----H---------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHhHHHHHHH-----H---------HHHHHHHHHHHHHHHHHHHHHH
Confidence 45555566666666553 1 2234677777777777775544
No 24
>1hwt_C Protein (heme activator protein); transcription factor, asymmetry, GAL4, complex activator/DNA, gene regulation/DNA complex; HET: DNA; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 2hap_C* 1qp9_A* 1pyc_A
Probab=24.53 E-value=40 Score=23.69 Aligned_cols=21 Identities=24% Similarity=0.295 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhc
Q 024653 193 INYVQSLQNQVEFLSMKLTAA 213 (264)
Q Consensus 193 I~YIK~LQ~QV~~Ls~~l~a~ 213 (264)
-.||..|+.+|..|+..|..+
T Consensus 57 ~~~~~~L~~ri~~LE~~l~~l 77 (81)
T 1hwt_C 57 DNELKKLRERVKSLEKTLSKV 77 (81)
T ss_dssp HHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 479999999999999776543
No 25
>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A
Probab=23.51 E-value=85 Score=26.08 Aligned_cols=36 Identities=19% Similarity=0.374 Sum_probs=29.0
Q ss_pred hhhHHHHHhhhcCCCCC---cCCChhchHHHHHHHHHHH
Q 024653 164 KINERLRCLQDIVPGCY---KTMGMTMMLDEIINYVQSL 199 (264)
Q Consensus 164 kIneri~~Lr~LVP~~~---Kk~dKAsIL~eAI~YIK~L 199 (264)
-|.=.|..|+.+||.-. ..+-|..||..|-|++..|
T Consensus 95 tId~gfqrl~k~~pr~pgdpe~lpk~~~lkraa~l~e~~ 133 (138)
T 3muj_A 95 TIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEAL 133 (138)
T ss_dssp CHHHHHHHHHHHSCCCTTCCSSCCHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccccCCCCCChhhhhHHHHHHHHHHHHHHH
Confidence 57888999999999532 2367999999999998766
No 26
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=22.46 E-value=41 Score=27.21 Aligned_cols=32 Identities=13% Similarity=0.175 Sum_probs=23.2
Q ss_pred hhcCCCCCcCCChhchHHHHHHHHHHHHHHHHH
Q 024653 173 QDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEF 205 (264)
Q Consensus 173 r~LVP~~~Kk~dKAsIL~eAI~YIK~LQ~QV~~ 205 (264)
..++|+=+...+ ...|+.+++|++.++++|++
T Consensus 190 ~~i~pgHg~~~~-~~~l~~~~~~l~~~~~~~~~ 221 (223)
T 1m2x_A 190 QYVVAGHDDWKD-QRSIQHTLDLINEYQQKQKA 221 (223)
T ss_dssp SEEEESBSCCCS-TTHHHHHHHHHHHHHHTC--
T ss_pred CEEEeCCCCcCC-HHHHHHHHHHHHHHHHHHhc
Confidence 356777555444 57899999999999998864
No 27
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=21.31 E-value=1.1e+02 Score=21.25 Aligned_cols=30 Identities=10% Similarity=0.104 Sum_probs=24.4
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 024653 185 MTMMLDEIINYVQSLQNQVEFLSMKLTAAS 214 (264)
Q Consensus 185 KAsIL~eAI~YIK~LQ~QV~~Ls~~l~a~~ 214 (264)
--..|++.++-+..|..++..|..++..+.
T Consensus 25 VD~FLd~v~~~~~~l~~e~~~L~~~~~~l~ 54 (57)
T 2wuj_A 25 VNEFLAQVRKDYEIVLRKKTELEAKVNELD 54 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346799999999999999999998887654
No 28
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=21.07 E-value=90 Score=21.98 Aligned_cols=26 Identities=19% Similarity=0.414 Sum_probs=22.8
Q ss_pred hHHHhhhhhhhHHHHHhhhcCCCCCc
Q 024653 156 LAERVRRGKINERLRCLQDIVPGCYK 181 (264)
Q Consensus 156 ~aERrRRekIneri~~Lr~LVP~~~K 181 (264)
.++|-+|..-++-+..|+.+-|..++
T Consensus 3 ~a~~i~~~e~~~~~~~L~~MFP~lD~ 28 (54)
T 1p3q_Q 3 LIKKIEENERKDTLNTLQNMFPDMDP 28 (54)
T ss_dssp THHHHHHHHHHHHHHHHHHHSTTSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHcccCCH
Confidence 57888888899999999999999654
No 29
>1tue_B Regulatory protein E2; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: b.91.1.1
Probab=20.88 E-value=1.2e+02 Score=26.96 Aligned_cols=92 Identities=18% Similarity=0.210 Sum_probs=60.7
Q ss_pred hhhhHHHHHhhhcCCCCCcCCChhchHHHHHHHHHHHHHHHHHHHhhhhhcccccccCCCchhHHHHHHHhhhhhHHHHH
Q 024653 163 GKINERLRCLQDIVPGCYKTMGMTMMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSESDAVETMQKAKAYKAKEMER 242 (264)
Q Consensus 163 ekIneri~~Lr~LVP~~~Kk~dKAsIL~eAI~YIK~LQ~QV~~Ls~~l~a~~~~~~~~~~~~~~e~~q~a~~~~~~e~e~ 242 (264)
|.+.+||.+||+-+=.+..+ | ..-|++-|+|-+-++.+---|--.-..=-..+| ....+.-..-.++|.++.+|+.
T Consensus 9 E~L~~RldalQe~ll~lyE~-d-S~~L~dqI~yW~lvR~E~vLly~AR~~G~~~lG--~q~VP~l~VSe~KAk~AIeM~L 84 (218)
T 1tue_B 9 ETLSERLSALQDKIIDHYEN-D-SKDIDSQIQYWQLIRWENAIFFAAREHGIQTLN--HQVVPAYNISKSKAHKAIELQM 84 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-C-CCCHHHHHHHHHHHHHHHHHHHHHHHTTCSEET--TEECCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc-C-CccHHHHHHHHHHHHHHHHHHHHHHHcCcCeeC--CeECCcHHHhHHHHHHHHHHHH
Confidence 46788888888876655543 2 466899999999998766555422211112222 2333333456688999999998
Q ss_pred HHHhcCCccccCCcce
Q 024653 243 LMKEGNFACSSSSSFL 258 (264)
Q Consensus 243 ~~r~~gl~~~~~~~~~ 258 (264)
.+..--=+.|-.-.|+
T Consensus 85 ~L~SL~~S~y~~E~WT 100 (218)
T 1tue_B 85 ALQGLAQSAYKTEDWT 100 (218)
T ss_dssp HHHHHTTSTTTTSCCC
T ss_pred HHHHhcCCCcCCCCcc
Confidence 8887666677777775
Done!