BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024654
(264 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255557387|ref|XP_002519724.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223541141|gb|EEF42697.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 265
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/265 (94%), Positives = 256/265 (96%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MATSTMALSS SF GKAV L+PS EL GR+SMRKT +KSVSSGSPWYGPDRVKYLGP
Sbjct: 1 MATSTMALSSPSFAGKAVKLSPSAPELMGNGRVSMRKTAAKSVSSGSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRVAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265
>gi|346987809|gb|AEO51755.1| chloroplast chlorophyll A/B binding protein [Dimocarpus longan]
Length = 263
Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust.
Identities = 248/264 (93%), Positives = 255/264 (96%), Gaps = 1/264 (0%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
MATSTM LSSSF+GKAV LAP+GN+L GR++MRKTG + VSSGSPWYGPDRVKYLGPF
Sbjct: 1 MATSTMTLSSSFIGKAVQLAPTGNDLMGNGRVTMRKTG-RQVSSGSPWYGPDRVKYLGPF 59
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
SGEPPSYLTGEFPGDYGWD AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 60 SGEPPSYLTGEFPGDYGWDAAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 119
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL 180
GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL
Sbjct: 120 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL 179
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
G+VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGR AMFSMFGFFVQAIVTGKGPLEN
Sbjct: 180 GKVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRSAMFSMFGFFVQAIVTGKGPLEN 239
Query: 241 LADHLADPVNNNAWAYATNFVPGK 264
LADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 LADHLADPVNNNAWAYATNFVPGK 263
>gi|255567270|ref|XP_002524616.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223536169|gb|EEF37824.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 265
Score = 505 bits (1300), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/265 (93%), Positives = 255/265 (96%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MATSTMALSS SF GKAV L+PS EL GR+SMRKT +K+VSSGSPWYGPDRVKYLGP
Sbjct: 1 MATSTMALSSPSFAGKAVKLSPSAPELMGNGRVSMRKTAAKNVSSGSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRVAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265
>gi|115825|sp|P07369.1|CB2G_SOLLC RecName: Full=Chlorophyll a-b binding protein 3C, chloroplastic;
AltName: Full=LHCII type I CAB-3C; Short=LHCP; Flags:
Precursor
gi|224932|prf||1204205G protein 3C,chlorophyll binding
Length = 267
Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/267 (91%), Positives = 255/267 (95%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MATSTMALSSS F GKAV L+PS +E++ GR++MRKT +K+ SSGSPWYGPDRVKYL
Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267
>gi|3036949|dbj|BAA25393.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 266
Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/266 (90%), Positives = 255/266 (95%), Gaps = 2/266 (0%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLG 58
MA+STMALSSSF GKAV L+PS +E++ G+++MRKT SK+ VSSGS WYGPDRVKYLG
Sbjct: 1 MASSTMALSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSGSLWYGPDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 180
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAYATNFVPGK 266
>gi|3036955|dbj|BAA25396.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/267 (91%), Positives = 256/267 (95%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA STMALSSS FVGKAV L+PS +E++ G+++MRKT +K+ VSSGSPWYGPDRVKYL
Sbjct: 1 MAASTMALSSSSFVGKAVKLSPSSSEITGNGKVTMRKTATKAKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267
>gi|115805|sp|P27495.1|CB24_TOBAC RecName: Full=Chlorophyll a-b binding protein 40, chloroplastic;
AltName: Full=LHCII type I CAB-40; Short=LHCP; Flags:
Precursor
gi|19829|emb|CAA36958.1| unnamed protein product [Nicotiana tabacum]
Length = 267
Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/267 (91%), Positives = 255/267 (95%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK--SVSSGSPWYGPDRVKYL 57
MA STMALSS SF GKAV L+PS +E++ G+++MRKT SK +VSSGSPWYGPDRVKYL
Sbjct: 1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267
>gi|3036948|dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/267 (91%), Positives = 255/267 (95%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA STMALSSS F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYL
Sbjct: 1 MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267
>gi|379069812|gb|AFC91647.1| chloroplast chlorophyll A/B binding protein [Hevea brasiliensis]
Length = 265
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/265 (93%), Positives = 250/265 (94%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MATSTMALSS SF GKAV L PS L R+SMRK+ K VSSGSPWYGPDRVKYLGP
Sbjct: 1 MATSTMALSSPSFAGKAVKLTPSAPGLMGNARVSMRKSVGKPVSSGSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265
>gi|3036946|dbj|BAA25391.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 265
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/265 (90%), Positives = 253/265 (95%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS SF G+AV L+PS +E++ GR+SMRKT +K V+S SPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSPSFAGQAVKLSPSASEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265
>gi|170404|gb|AAA34148.1| chlorophyll a/b-binding protein Cab-3C [Solanum lycopersicum]
Length = 267
Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/267 (91%), Positives = 254/267 (95%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MATSTMALSSS F GKAV L+PS +E++ GR++MRKT +K+ SSGSPWYGPDRVKYL
Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLG ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGPADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267
>gi|3036942|dbj|BAA25388.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 265
Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/265 (90%), Positives = 252/265 (95%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA +TMALSS SF G+AV L+PS +E++ GR+SMRKT +K VSS SPWYGPDRVKYLGP
Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEITGNGRVSMRKTAAKPVSSSSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLT EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGESPSYLTSEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265
>gi|115781|sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding protein 16, chloroplastic;
AltName: Full=LHCII type I CAB-16; Short=LHCP; Flags:
Precursor
gi|19819|emb|CAA36955.1| unnamed protein product [Nicotiana tabacum]
Length = 266
Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/266 (90%), Positives = 253/266 (95%), Gaps = 2/266 (0%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLG 58
MA ST ALSS F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLG
Sbjct: 1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGG 180
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
ENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWSYATNFVPGK 266
>gi|693920|gb|AAA80593.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust.
Identities = 242/265 (91%), Positives = 251/265 (94%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS SF G+AV L+PS +E++ GRI+MRK +KS S SPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSPSFAGQAVKLSPSTSEITGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265
>gi|237651899|gb|ACR08639.1| chloroplast chlorophyll A/B binding protein [Mangifera indica]
Length = 264
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/265 (92%), Positives = 251/265 (94%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS SF GKAV L+P+ EL GR+SMR+T +K SGSPWYGPDRVKYL P
Sbjct: 1 MAASTMALSSPSFAGKAVKLSPAPRELMGNGRVSMRRT-AKPTPSGSPWYGPDRVKYLSP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYR+AGGP
Sbjct: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRVAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 NLADHLADPVNNNAWAYATNFVPGK 264
>gi|3036944|dbj|BAA25389.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 265
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/265 (90%), Positives = 253/265 (95%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA +TMALSS SF G+AV L+PS +E++ GR+SMRKT +K V+S SPWYGPDRVKYLGP
Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRVAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWSYATNFVPGK 265
>gi|693914|gb|AAA80589.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 241/265 (90%), Positives = 251/265 (94%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA +TMALSS SF G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGP
Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAFATNFVPGK 265
>gi|3036945|dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 265
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/265 (90%), Positives = 252/265 (95%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS SF G+AV L+PS E++ GR+SMRKT +K V+S SPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFS+GGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRVAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWSYATNFVPGK 265
>gi|2804572|dbj|BAA24493.1| chlorophyll a/b-binding protein [Fagus crenata]
Length = 264
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/265 (92%), Positives = 252/265 (95%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS S GKAV LAPS EL N GR+SMRK+ S++VSSGSPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSPSLAGKAVKLAPSTPEL-NVGRVSMRKSASRNVSSGSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGP
Sbjct: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+E
Sbjct: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPV NNAWAYATNFVPGK
Sbjct: 240 NLADHLADPVTNNAWAYATNFVPGK 264
>gi|356559639|ref|XP_003548106.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic
isoform 1 [Glycine max]
gi|356559641|ref|XP_003548107.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic
isoform 2 [Glycine max]
gi|356559643|ref|XP_003548108.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic
isoform 3 [Glycine max]
Length = 264
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/265 (91%), Positives = 252/265 (95%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSSS G+A+ LAPS +L G R+SMRKT SK+VSSGSPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSSSLAGQAIKLAPSTPQLGVG-RVSMRKTASKTVSSGSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGP
Sbjct: 120 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 NLADHLADPVNNNAWAYATNFVPGK 264
>gi|115792|sp|P27493.1|CB22_TOBAC RecName: Full=Chlorophyll a-b binding protein 21, chloroplastic;
AltName: Full=LHCII type I CAB-21; Short=LHCP; Flags:
Precursor
gi|19823|emb|CAA36957.1| unnamed protein product [Nicotiana tabacum]
Length = 265
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/265 (90%), Positives = 252/265 (95%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA +TMALSS SF G+AV L+PS E++ GR+SMRKT +K V+S SPWYGPDRVKYLGP
Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265
>gi|449433636|ref|XP_004134603.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like isoform 1 [Cucumis sativus]
gi|449433638|ref|XP_004134604.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like isoform 2 [Cucumis sativus]
gi|449433640|ref|XP_004134605.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like isoform 3 [Cucumis sativus]
Length = 265
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/265 (90%), Positives = 251/265 (94%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS + G+AV L+P+ E+ + +MRKT SKSVSSGSPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265
>gi|358248490|ref|NP_001240146.1| chlorophyll a-b binding protein 21, chloroplastic-like [Glycine
max]
gi|506629|gb|AAA50172.1| photosystem II type I chlorophyll a/b-binding protein [Glycine max]
gi|255636158|gb|ACU18421.1| unknown [Glycine max]
Length = 264
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/265 (91%), Positives = 252/265 (95%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSSS G+A+ LAPS EL G R+SMRKT SK+VSSGSPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSSSLAGQAIKLAPSTPELGVG-RVSMRKTASKTVSSGSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGP
Sbjct: 120 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 NLADHLADPVNNNAWAYATNFVPGK 264
>gi|115819|sp|P07370.1|CB2B_SOLLC RecName: Full=Chlorophyll a-b binding protein 1B, chloroplastic;
AltName: Full=LHCII type I CAB-1B; Short=LHCP; Flags:
Precursor
gi|170402|gb|AAA34147.1| chlorophyll a/b-binding protein Cab-1B [Solanum lycopersicum]
Length = 265
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/265 (90%), Positives = 251/265 (94%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA +TMALSS SF G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGP
Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAFATNFVPGK 265
>gi|353167261|gb|AEQ67395.1| chloroplast chlorophyll A/B binding protein [Canarium album]
Length = 264
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/265 (92%), Positives = 251/265 (94%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS +F GKAV L+PS EL GR++MRKT +K SGSPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSPAFAGKAVKLSPSAPELMGNGRVNMRKTFNKP-PSGSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 60 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGP
Sbjct: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 NLADHLADPVNNNAWAYATNFVPGK 264
>gi|693922|gb|AAA80594.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/265 (90%), Positives = 250/265 (94%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS SF G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGE VWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEVVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWSYATNFVPGK 265
>gi|224927|prf||1204205B protein 1B,chlorophyll binding
Length = 265
Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/265 (90%), Positives = 251/265 (94%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA +TMALSS SF G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGP
Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAFATNFVPGK 265
>gi|188572008|gb|ACD64978.1| chloroplast chlorophyll a/b-binding protein [Ophiopogon japonicus]
Length = 264
Score = 491 bits (1265), Expect = e-137, Method: Compositional matrix adjust.
Identities = 247/263 (93%), Positives = 251/263 (95%), Gaps = 3/263 (1%)
Query: 4 STMALSS-SFVGKAVNLAPS-GNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFS 61
+TM LSS S GKAV LAPS +EL GRISMRKTG KSVSSGSPWYGPDRVKYLGPFS
Sbjct: 3 ATMVLSSPSLAGKAVKLAPSPASELMGNGRISMRKTG-KSVSSGSPWYGPDRVKYLGPFS 61
Query: 62 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 121
GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG
Sbjct: 62 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 121
Query: 122 VKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG 181
VKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLG
Sbjct: 122 VKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGPLG 181
Query: 182 EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
EVTDPLYPGGSFDPLGLADDPEAF+ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL
Sbjct: 182 EVTDPLYPGGSFDPLGLADDPEAFSELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
Query: 242 ADHLADPVNNNAWAYATNFVPGK 264
ADHLADPVNNNAWAYATNFVPGK
Sbjct: 242 ADHLADPVNNNAWAYATNFVPGK 264
>gi|449527933|ref|XP_004170962.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 265
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/265 (89%), Positives = 250/265 (94%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA S MALSS + G+AV L+P+ E+ + +MRKT SKSVSSGSPWYGPDRVKYLGP
Sbjct: 1 MAASAMALSSPTLAGQAVKLSPTAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265
>gi|226358409|gb|ACO51067.1| chloroplast chlorophyll A-B binding protein [Gossypium hirsutum]
Length = 264
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/265 (91%), Positives = 251/265 (94%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA++TMALSS SF GKAV +PS E+ GR+SMRKT +K V SGSPWYGPDRV YLGP
Sbjct: 1 MASTTMALSSPSFAGKAVKFSPSTPEIQGTGRVSMRKT-TKPVPSGSPWYGPDRVLYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
SGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 60 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGP
Sbjct: 120 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 NLADHLADPVNNNAWAYATNFVPGK 264
>gi|356559635|ref|XP_003548104.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like
[Glycine max]
Length = 264
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/265 (90%), Positives = 252/265 (95%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSSS G+A+ LAPS +L G R+SMRKT SK+V+SGSPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSSSLAGQAIKLAPSTPQLGVG-RVSMRKTASKTVTSGSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGP
Sbjct: 120 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 NLADHLADPVNNNAWAYATNFVPGK 264
>gi|693916|gb|AAA80591.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 239/265 (90%), Positives = 251/265 (94%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA +TMALSS SF G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGP
Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL+R
Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAFATNFVPGK 265
>gi|102139745|gb|ABF69952.1| chlorophyll A-B binding protein (CAB), putative [Musa acuminata]
Length = 265
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/264 (92%), Positives = 250/264 (94%), Gaps = 2/264 (0%)
Query: 3 TSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK-SVSSGSPWYGPDRVKYLGPF 60
+TMALSS SF GKAV LAPS + + GR++MRK G K + SSGSPWYGPDRVKYLGP
Sbjct: 2 AATMALSSPSFAGKAVKLAPSASGVLGQGRVTMRKAGGKPAASSGSPWYGPDRVKYLGPL 61
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 62 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 121
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL 180
GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGPL
Sbjct: 122 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPL 181
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 182 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 241
Query: 241 LADHLADPVNNNAWAYATNFVPGK 264
LADHLADPVNNNAWAYATNFVPGK
Sbjct: 242 LADHLADPVNNNAWAYATNFVPGK 265
>gi|449433646|ref|XP_004134608.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 265
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/265 (89%), Positives = 250/265 (94%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA S MALSS + G+AV L+P+ E+ + +MRKT SKSVSSGSPWYGPDRVKYLGP
Sbjct: 1 MAASAMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265
>gi|449459364|ref|XP_004147416.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
[Cucumis sativus]
Length = 265
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/265 (90%), Positives = 249/265 (93%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA S+MALSS SF GK V L PS EL R++MRK+ +KSVSSGSPWYGPDRVKYLGP
Sbjct: 1 MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLTDPVNNNAWAYATNFVPGK 265
>gi|9587207|gb|AAF89207.1|AF279250_1 LHCII type I chlorophyll a/b-binding protein [Vigna radiata]
Length = 264
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/265 (91%), Positives = 252/265 (95%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS S G+A+ L+PS +LS GGRISMRKT SKSVSSGSPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSPSLAGQAIKLSPSTPDLS-GGRISMRKTASKSVSSGSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALG VFPELLAR
Sbjct: 60 FSGEAPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGSVFPELLAR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGP
Sbjct: 120 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVILMGAVEGYRIAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 NLADHLADPVNNNAWAYATNFVPGK 264
>gi|9587205|gb|AAF89206.1|AF279249_1 LHCII type I chlorophyll a/b-binding protein [Vigna radiata]
Length = 264
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/265 (91%), Positives = 252/265 (95%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS S G+A+ L+PS ELS GGRISMRK SKSVSSGSPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSPSLAGQAIKLSPSTPELS-GGRISMRKAASKSVSSGSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 60 FSGEAPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGP
Sbjct: 120 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFS+FGFFVQAIVTGKGPLE
Sbjct: 180 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSIFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 NLADHLADPVNNNAWAYATNFVPGK 264
>gi|115807|sp|P12470.1|CB25_NICPL RecName: Full=Chlorophyll a-b binding protein E, chloroplastic;
AltName: Full=LHCII type I CAB-E; Short=LHCP; Flags:
Precursor
gi|170212|gb|AAA34056.1| chlorophyll a/b-binding protein-E [Nicotiana plumbaginifolia]
Length = 266
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/266 (89%), Positives = 252/266 (94%), Gaps = 2/266 (0%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLG 58
MA ST ALSS F GKAV L+PS +E++ G+++MRKT +K+ VSSGSPWYGPDRVKYLG
Sbjct: 1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGE 180
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQA+VTGKGPL
Sbjct: 181 PLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPL 240
Query: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
ENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWSYATNFVPGK 266
>gi|102139977|gb|ABF70112.1| chlorophyll A-B binding protein (CAB), putative [Musa balbisiana]
Length = 267
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/265 (90%), Positives = 252/265 (95%), Gaps = 4/265 (1%)
Query: 4 STMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK---SVSSGSPWYGPDRVKYLGP 59
+TMALSS S GKAV LAPS +++ GR++MRK+ +K + +SGSPWYGPDRVKYLGP
Sbjct: 3 ATMALSSPSLAGKAVKLAPSASDVLGEGRVTMRKSTAKAKPAAASGSPWYGPDRVKYLGP 62
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 63 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 122
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGP
Sbjct: 123 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGP 182
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 183 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 242
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 243 NLADHLADPVNNNAWAYATNFVPGK 267
>gi|115810|sp|P27496.1|CB25_TOBAC RecName: Full=Chlorophyll a-b binding protein 50, chloroplastic;
AltName: Full=LHCII type I CAB-50; Short=LHCP; Flags:
Precursor
gi|19833|emb|CAA36956.1| unnamed protein product [Nicotiana tabacum]
Length = 267
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/267 (89%), Positives = 254/267 (95%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TMALSSS F GKAV L+PS +E++ G+++MRKT +K+ +SSGSPWYGPDRVKYL
Sbjct: 1 MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVK IKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSYATNFVPGK 267
>gi|693918|gb|AAA80592.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/265 (89%), Positives = 250/265 (94%), Gaps = 1/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA +TMALSS SF G+AV L+PS +E++ GRI+MRK +KS S SPWYGPDRVKYLGP
Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEITGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIF EGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFREGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEV +PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVNPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWSYATNFVPGK 265
>gi|87621681|gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
terminalis]
Length = 267
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/267 (91%), Positives = 251/267 (94%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGS--KSVSSGSPWYGPDRVKYL 57
MA+STMALSS S GKAV LAPS +EL GR+SMRKTG K VSSGSPWYGPDRVKYL
Sbjct: 1 MASSTMALSSPSLAGKAVKLAPSASELLGVGRVSMRKTGGRPKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVLLMGAVEGYRIAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWAY TNFV GK
Sbjct: 241 LENLADHLADPVNNNAWAYPTNFVSGK 267
>gi|224114357|ref|XP_002316737.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
gi|222859802|gb|EEE97349.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
Length = 264
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/265 (91%), Positives = 251/265 (94%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA +TMALSS +F GKAV L+PS EL GR+SMRKT +K VSSGSPWYGPDRVKYLGP
Sbjct: 1 MAAATMALSSPAFAGKAVKLSPSSPELMGNGRVSMRKT-TKPVSSGSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGE+TDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNF PGK
Sbjct: 240 NLADHLADPVNNNAWAYATNFAPGK 264
>gi|289920|gb|AAA18529.1| chlorophyll A/B binding protein [Gossypium hirsutum]
Length = 264
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/265 (90%), Positives = 250/265 (94%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA++TMALSS SF GKAV +PS E+ GR+SMRKT +K V SGSPWYGPDRV YLGP
Sbjct: 1 MASTTMALSSPSFAGKAVKFSPSTPEIQGTGRVSMRKT-TKPVPSGSPWYGPDRVLYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
SGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 60 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGP
Sbjct: 120 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDPLYPGGSFDPLG ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEVTDPLYPGGSFDPLGFADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 NLADHLADPVNNNAWAYATNFVPGK 264
>gi|3036953|dbj|BAA25395.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/267 (89%), Positives = 251/267 (94%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
M STMALSS SF G AV L+PS +E++ G+ MRKT +K+ VSSGSPWYGPDRVKYL
Sbjct: 1 MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA+EGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENL DHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLVDHLADPVNNNAWAYATNFVPGK 267
>gi|449455992|ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus]
gi|449525484|ref|XP_004169747.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus]
Length = 267
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/267 (89%), Positives = 253/267 (94%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA S+MALSS SF G+AV L+P+ ++L GRI+MRKT K VSSGSPWYGPDRVKYL
Sbjct: 1 MAASSMALSSPSFAGQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+TDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267
>gi|2196772|gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust.
Identities = 239/267 (89%), Positives = 251/267 (94%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTG--SKSVSSGSPWYGPDRVKYL 57
MA+STMALSS S GK V LAP+ +E+ GRI+MRKT +KSVSS SPWYGPDRVKYL
Sbjct: 1 MASSTMALSSPSLAGKMVKLAPTASEILGEGRITMRKTAGKTKSVSSDSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETF KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFTKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGA+EGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAIEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVTDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWA+ATNF PGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFAPGK 267
>gi|224381552|gb|ACN41907.1| chlorophyll A/B binding protein [Gardenia jasminoides]
Length = 264
Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/265 (90%), Positives = 251/265 (94%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS SF G+AV L+PS EL GRISM++T ++ VSSGSPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSPSFAGQAVKLSPSAPELMGNGRISMKRT-TRPVSSGSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM GALGCVFPELL+R
Sbjct: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMPGALGCVFPELLSR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIF EGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGP
Sbjct: 120 NGVKFGEAVWFKAGSQIFQEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLAD PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEVTDPIYPGGSFDPLGLADVPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 NLADHLADPVNNNAWAYATNFVPGK 264
>gi|3036951|dbj|BAA25394.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/267 (89%), Positives = 251/267 (94%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKT--GSKSVSSGSPWYGPDRVKYL 57
MA +TM+LSS SF GKAV L+PS E+ G+++MRKT +K VSSGSPWYGPDRVKYL
Sbjct: 1 MAAATMSLSSPSFAGKAVKLSPSSYEIIGNGKVTMRKTVIKAKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGNSPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267
>gi|115795|sp|P12469.1|CB23_NICPL RecName: Full=Chlorophyll a-b binding protein C, chloroplastic;
AltName: Full=LHCII type I CAB-C; Short=LHCP; Flags:
Precursor
gi|170210|gb|AAA34055.1| chlorophyll a/b-binding protein-C [Nicotiana plumbaginifolia]
Length = 267
Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/267 (89%), Positives = 252/267 (94%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA STMALSSS F GKAV L+PS +E++ G+++MRKT SK+ VSS SPWYGP+RVKYL
Sbjct: 1 MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFK G+QIFS+GGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
PLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 EPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267
>gi|225463432|ref|XP_002275075.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
vinifera]
Length = 264
Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/265 (90%), Positives = 250/265 (94%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS SF G V L P+ +++ GGR+SMRKTG K+ SGSPWYGPDRV YLGP
Sbjct: 1 MAASTMALSSPSFAGTTVKLGPNASDILGGGRVSMRKTGFKA-PSGSPWYGPDRVLYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL+R
Sbjct: 60 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGP
Sbjct: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 NLADHLADPVNNNAWAYATNFVPGK 264
>gi|225461832|ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
vinifera]
gi|147833686|emb|CAN73057.1| hypothetical protein VITISV_007597 [Vitis vinifera]
Length = 267
Score = 488 bits (1256), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/267 (90%), Positives = 251/267 (94%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTG--SKSVSSGSPWYGPDRVKYL 57
MA STMALSS S GKA+ LAPS ++L GR++MRKTG +K VSSGSPWYG DRVKYL
Sbjct: 1 MAASTMALSSPSLAGKALKLAPSASDLLGEGRVTMRKTGGRAKPVSSGSPWYGTDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMGAVEGYRI G
Sbjct: 121 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVILMGAVEGYRIGG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267
>gi|115808|sp|P04783.1|CB25_PETSP RecName: Full=Chlorophyll a-b binding protein 91R, chloroplastic;
AltName: Full=LHCII type I CAB-91R; Short=LHCP; Flags:
Precursor
gi|20487|emb|CAA26209.1| unnamed protein product [Petunia sp.]
Length = 267
Score = 488 bits (1256), Expect = e-136, Method: Compositional matrix adjust.
Identities = 239/267 (89%), Positives = 252/267 (94%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TMALSS SF GKAV +PS +E++ G+ +MRKT +K+ VSSGSPWYGPDRVKYL
Sbjct: 1 MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSYATNFVPGK 267
>gi|94404555|gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
cathayensis]
Length = 267
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/267 (90%), Positives = 251/267 (94%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGS--KSVSSGSPWYGPDRVKYL 57
MA STMALSS S G+A+ LAPS ++L GR++MRKT K VSSGSPWYGPDRVKYL
Sbjct: 1 MAASTMALSSPSLAGQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267
>gi|225463428|ref|XP_002274942.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic
isoform 1 [Vitis vinifera]
gi|359483839|ref|XP_003633024.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic
isoform 2 [Vitis vinifera]
gi|147776663|emb|CAN67709.1| hypothetical protein VITISV_003096 [Vitis vinifera]
Length = 264
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/265 (90%), Positives = 250/265 (94%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS S G AV L P+ +++ GGR+SMRKTG K+ SGSPWYGPDRV YLGP
Sbjct: 1 MAASTMALSSPSLAGTAVKLGPNASQILGGGRVSMRKTGFKA-PSGSPWYGPDRVLYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL+R
Sbjct: 60 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGP
Sbjct: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 NLADHLADPVNNNAWAYATNFVPGK 264
>gi|147857734|emb|CAN78667.1| hypothetical protein VITISV_031287 [Vitis vinifera]
Length = 264
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/265 (90%), Positives = 250/265 (94%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS SF G V L P+ +++ GGR+SMRKTG K+ SGSPWYGPDRV YLGP
Sbjct: 1 MAASTMALSSPSFAGTXVKLGPNASDILGGGRVSMRKTGFKA-PSGSPWYGPDRVLYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL+R
Sbjct: 60 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGP
Sbjct: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 NLADHLADPVNNNAWAYATNFVPGK 264
>gi|133917261|emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
Length = 267
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/267 (89%), Positives = 252/267 (94%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK--SVSSGSPWYGPDRVKYL 57
MA+STMALSS S GKA+ L P+ +E+ GR++MRKT K +VSSGSPWYGPDRVKYL
Sbjct: 1 MASSTMALSSPSLAGKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPGK 267
>gi|115812|sp|P27491.1|CB27_TOBAC RecName: Full=Chlorophyll a-b binding protein 7, chloroplastic;
AltName: Full=LHCII type I CAB-7; Short=LHCP; Flags:
Precursor
gi|19837|emb|CAA41187.1| chlorophyll a /b binding protein [Nicotiana tabacum]
Length = 267
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/267 (89%), Positives = 251/267 (94%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
M STMALSS SF G AV L+PS +E++ G+ MRKT +K+ VSSGSPWYGPDRVKYL
Sbjct: 1 MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA+EGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
L+NL DHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LDNLVDHLADPVNNNAWAYATNFVPGK 267
>gi|255647011|gb|ACU23974.1| unknown [Glycine max]
Length = 264
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/265 (90%), Positives = 251/265 (94%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSSS G+A+ LAPS +L G R+SMRKT SK+V+SGSPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSSSLAGQAIKLAPSTPQLGVG-RVSMRKTASKTVTSGSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSY TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 60 FSGEPPSYRTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGP
Sbjct: 120 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+K+GRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKHGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 NLADHLADPVNNNAWAYATNFVPGK 264
>gi|225446831|ref|XP_002283566.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
vinifera]
gi|147799091|emb|CAN74831.1| hypothetical protein VITISV_023674 [Vitis vinifera]
Length = 270
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/270 (90%), Positives = 255/270 (94%), Gaps = 6/270 (2%)
Query: 1 MATS-TMALSS-SFVGKAVNLAPSGNELSNG--GRISMRKT--GSKSVSSGSPWYGPDRV 54
MATS TMALSS S G+AV LAP+ EL G GR++MRK+ SK+VSSGSPWYGPDRV
Sbjct: 1 MATSSTMALSSPSLAGQAVKLAPNVTELLAGDQGRVTMRKSVAKSKAVSSGSPWYGPDRV 60
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP
Sbjct: 61 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 120
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
ELL+RNGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMGAVEGYR
Sbjct: 121 ELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVILMGAVEGYR 180
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 181 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 240
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 KGPLENLADHLADPVNNNAWAYATNFVPGK 270
>gi|224083006|ref|XP_002306927.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
gi|118487931|gb|ABK95787.1| unknown [Populus trichocarpa]
gi|118489514|gb|ABK96559.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118489848|gb|ABK96723.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118489863|gb|ABK96730.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222856376|gb|EEE93923.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
Length = 264
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/265 (90%), Positives = 250/265 (94%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA +TMALSS S GKAV L PS +E+ GR+SMRKT +K V SGSPWYGPDRVKYLGP
Sbjct: 1 MAAATMALSSPSLAGKAVKLNPSSSEIMGNGRVSMRKT-TKPVPSGSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 240 NLADHLSDPVNNNAWAYATNFVPGK 264
>gi|2196770|gb|AAB61236.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/267 (89%), Positives = 250/267 (93%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA+STMALSS SF GKAV L+P+ +E GRI+MRK KS + SPWYGPDRVKYL
Sbjct: 1 MASSTMALSSPSFAGKAVKLSPTASETLGEGRITMRKAAGKSKVATIDSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA+EGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVTDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267
>gi|73665920|gb|AAZ79657.1| putative chlorophyll a/b-binding protein [Fagus sylvatica]
Length = 260
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/261 (92%), Positives = 249/261 (95%), Gaps = 2/261 (0%)
Query: 4 STMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSG 62
STMALSS S GKAV LAPS EL N GR+SMRK+ S++VSSGSPWYGPDRVKYLGPFSG
Sbjct: 1 STMALSSPSLAGKAVKLAPSTPEL-NVGRVSMRKSASRNVSSGSPWYGPDRVKYLGPFSG 59
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGV
Sbjct: 60 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGV 119
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 182
KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGPLGE
Sbjct: 120 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVLLMGAVEGYRIAGGPLGE 179
Query: 183 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 242
VTDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLA
Sbjct: 180 VTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 239
Query: 243 DHLADPVNNNAWAYATNFVPG 263
DHLADPV NNAWAYATNFVPG
Sbjct: 240 DHLADPVTNNAWAYATNFVPG 260
>gi|283549609|emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
oleracea]
Length = 267
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/267 (88%), Positives = 253/267 (94%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK--SVSSGSPWYGPDRVKYL 57
MA+++MALSS S GKA+ L P+ +E+ + GR++MRKT K +VSSGSPWYGPDRVKYL
Sbjct: 1 MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPGK 267
>gi|115780|sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|14240|emb|CAA32526.1| chlorophyll a/b binding protein precursor [Spinacia oleracea]
gi|193783447|emb|CAJ77389.3| major chlorophyll a/b binding protein LHCb1.3 [Spinacia oleracea]
Length = 267
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/267 (89%), Positives = 249/267 (93%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK--SVSSGSPWYGPDRVKYL 57
MA+STMALSS S GKAV L P+ +E+ GRI+MRKT K +V S SPWYGPDRVKYL
Sbjct: 1 MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAW +ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPGK 267
>gi|115798|sp|P04781.1|CB23_PETSP RecName: Full=Chlorophyll a-b binding protein 22R, chloroplastic;
AltName: Full=LHCII type I CAB-22R; Short=LHCP; Flags:
Precursor
gi|20479|emb|CAA26213.1| unnamed protein product [Petunia sp.]
Length = 267
Score = 485 bits (1248), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/267 (88%), Positives = 250/267 (93%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TMALSSS F GKAV L+ S +E++ G+++MRKT +K+ SS SPWYGPDRVKYL
Sbjct: 1 MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 61 GPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNG+KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 121 ARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSYATNFVPGK 267
>gi|224085884|ref|XP_002307725.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
gi|118485884|gb|ABK94788.1| unknown [Populus trichocarpa]
gi|222857174|gb|EEE94721.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
Length = 264
Score = 485 bits (1248), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/265 (90%), Positives = 249/265 (93%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA +TMALSS S GKAV L PS +E+ GR+SMRKT +K V SGSPWYGPDRVKYLGP
Sbjct: 1 MAAATMALSSPSLAGKAVKLNPSSSEIMGNGRVSMRKT-TKPVPSGSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHL+DPVNNNAWAYATNF PGK
Sbjct: 240 NLADHLSDPVNNNAWAYATNFAPGK 264
>gi|255548299|ref|XP_002515206.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223545686|gb|EEF47190.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 267
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/267 (90%), Positives = 250/267 (93%), Gaps = 7/267 (2%)
Query: 4 STMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSK-SVSSGSPWYGPDRVKYL 57
+TM LSS+F GKAV L+ + EL S+ GR++MRKT K + SSGSPWYGPDRVKYL
Sbjct: 2 ATMTLSSTFTGKAVPLS-AQTELPATVRSSNGRVTMRKTAGKPAASSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267
>gi|115804|sp|P04782.1|CB24_PETSP RecName: Full=Chlorophyll a-b binding protein 25, chloroplastic;
AltName: Full=LHCII type I CAB-25; Short=LHCP; Flags:
Precursor
gi|20483|emb|CAA26211.1| unnamed protein product [Petunia sp.]
Length = 266
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/267 (89%), Positives = 253/267 (94%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TMA+SSS F GKAVN+ PS ++++ G+ +MRKT +K+ VSSGSPWYGPDRVKYL
Sbjct: 1 MAAATMAISSSSFAGKAVNV-PSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 60 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 240 LENLADHLADPVNNNAWAFATNFVPGK 266
>gi|21419|emb|CAA78379.1| chlorophyll a/b-binding protein PS II-Type I [Solanum tuberosum]
Length = 267
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/267 (88%), Positives = 250/267 (93%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TMALSSS F GKAV L+PS +E++ GR +MRKT +K+ VSSGSPWYGPDRVKYL
Sbjct: 1 MAAATMALSSSTFAGKAVKLSPSSSEITGNGRFTMRKTAAKAKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGE PGDYGWDTAGLSADPETFAKNRELEVIHCRWA+L LGCVFPELL
Sbjct: 61 GPFSGEAPSYLTGEKPGDYGWDTAGLSADPETFAKNRELEVIHCRWAILERLGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
+RNGVKFGEAVWFK G+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 121 SRNGVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267
>gi|2645999|gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I precursor [Panax
ginseng]
Length = 266
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/266 (90%), Positives = 249/266 (93%), Gaps = 2/266 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK-SVSSGSPWYGPDRVKYLG 58
MA STMALSS SF G AV +APS +EL GRISMRKTG K + SSGSPWYGPDRVKYLG
Sbjct: 1 MAASTMALSSPSFAGMAVKVAPSSSELFGSGRISMRKTGKKPAASSGSPWYGPDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 180
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
ENLAD LADPVNNNAWAYATNFVPGK
Sbjct: 241 ENLADPLADPVNNNAWAYATNFVPGK 266
>gi|2196774|gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/267 (88%), Positives = 250/267 (93%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTG--SKSVSSGSPWYGPDRVKYL 57
MA+S MALSS S GKAV L P+ +++ GRI+MRKT +K+VSS SPWYGPDRVKYL
Sbjct: 1 MASSAMALSSPSLAGKAVKLNPTTSQILGEGRITMRKTAGKTKNVSSDSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGA+EGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAIEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWA+ATNF PGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFAPGK 267
>gi|374095596|gb|AEY85026.1| light-harvesting complex II protein [Cajanus cajan]
Length = 262
Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/265 (89%), Positives = 249/265 (93%), Gaps = 4/265 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA S+MALSS S GKAV L+PS E+ GR+SMRKT +K SSGSPWYGPDRVKYLGP
Sbjct: 1 MAASSMALSSPSLAGKAVKLSPSTQEV---GRVSMRKTVTKQASSGSPWYGPDRVKYLGP 57
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 58 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 117
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+ IFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGP
Sbjct: 118 NGVKFGEAVWFKAGSLIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGP 177
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 178 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 237
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHL+DPVN+NAWAYATNFVPGK
Sbjct: 238 NLADHLSDPVNSNAWAYATNFVPGK 262
>gi|217944|dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein (LHCP) precursor
[Lactuca sativa]
Length = 266
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/266 (88%), Positives = 247/266 (92%), Gaps = 2/266 (0%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS--SGSPWYGPDRVKYLG 58
MA STMALSS F G+AV +PS +EL GR+SMRKT + + SGSPWYGPDRVKYLG
Sbjct: 1 MAASTMALSSPFAGQAVKTSPSSSELFGNGRVSMRKTAAAKKAAPSGSPWYGPDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLA 120
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 180
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
ENLADHLADPV NNAW+YATNFVPGK
Sbjct: 241 ENLADHLADPVANNAWSYATNFVPGK 266
>gi|556367|gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein [Prunus persica]
Length = 267
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/267 (88%), Positives = 250/267 (93%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA+STMALSS S G+AV L S + + GRI+MRKT SKS VSSGSPWYGPDRVKYL
Sbjct: 1 MASSTMALSSPSLAGQAVKLGSSVSNIVGEGRITMRKTASKSKNVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
+RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG
Sbjct: 121 SRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+TDPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEITDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
+ENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWSYATNFVPGK 267
>gi|115768|sp|P08221.1|CB21_CUCSA RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|167523|gb|AAA33124.1| chlorophyll a/b-binding protein, partial [Cucumis sativus]
Length = 255
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/254 (90%), Positives = 242/254 (95%)
Query: 11 SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTG 70
+ G+AV L+P+ E+ + +MRKT SKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTG
Sbjct: 2 TLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTG 61
Query: 71 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 130
EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWF
Sbjct: 62 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWF 121
Query: 131 KAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPG 190
KAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP+YPG
Sbjct: 122 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPG 181
Query: 191 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 250
GSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN
Sbjct: 182 GSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 241
Query: 251 NNAWAYATNFVPGK 264
NNAWAYATNFVPGK
Sbjct: 242 NNAWAYATNFVPGK 255
>gi|81074613|gb|ABB55370.1| chlorophyll a-b binding protein 3C-like [Solanum tuberosum]
Length = 267
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/256 (91%), Positives = 245/256 (95%), Gaps = 2/256 (0%)
Query: 11 SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYL 68
+F GKAV L+PS +E++ GRI+MRK+ +K+ SSGSPWYGPDRVKYLGPFSGE PSYL
Sbjct: 12 TFAGKAVKLSPSSSEITGNGRITMRKSVAKAKPASSGSPWYGPDRVKYLGPFSGEAPSYL 71
Query: 69 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 128
TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV
Sbjct: 72 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 131
Query: 129 WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLY 188
WFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLY
Sbjct: 132 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLY 191
Query: 189 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP
Sbjct: 192 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 251
Query: 249 VNNNAWAYATNFVPGK 264
VNNNAWA+ATNFVPGK
Sbjct: 252 VNNNAWAFATNFVPGK 267
>gi|133917263|emb|CAJ77391.1| major chlorophyll a/b binding protein LHCb1.1 [Spinacia oleracea]
gi|283549607|emb|CAX64457.1| major chlorophyll a/b binding protein LHCb1.1 precursor [Spinacia
oleracea]
Length = 267
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/267 (88%), Positives = 251/267 (94%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK--SVSSGSPWYGPDRVKYL 57
MA+STMALSS +F GKAV L PS +++ GRISMRK+ K +VSSGSPWYGPDRVKYL
Sbjct: 1 MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAW +ATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPGN 267
>gi|115774|sp|P04779.1|CB21_PETSP RecName: Full=Chlorophyll a-b binding protein 13, chloroplastic;
AltName: Full=LHCII type I CAB-13; Short=LHCP; Flags:
Precursor
gi|20471|emb|CAA26210.1| unnamed protein product [Petunia sp.]
Length = 266
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/267 (88%), Positives = 251/267 (94%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TMALSSS F GKAVN+ PS +E++ G+++MRKT +K+ VSSGSPWYGPDRVKYL
Sbjct: 1 MAAATMALSSSSFAGKAVNV-PSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL
Sbjct: 60 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELF 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIF EGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 240 LENLADHLADPVNNNAWAFATNFVPGK 266
>gi|285804077|gb|ADC35579.1| chloroplast chlorophyll a/b binding protein [Lycoris radiata]
Length = 265
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/263 (92%), Positives = 246/263 (93%), Gaps = 2/263 (0%)
Query: 4 STMALSS-SFVGKAVNLAPS-GNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFS 61
STMALSS S GKAV L PS +EL GRISMRKT +K VSSGSPWYG DRVKYLGPFS
Sbjct: 3 STMALSSPSLAGKAVKLGPSAASELLGNGRISMRKTIAKPVSSGSPWYGADRVKYLGPFS 62
Query: 62 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 121
GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG
Sbjct: 63 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 122
Query: 122 VKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG 181
VKFGEAVWFKAGAQIFS+GGLDYLGN SL+HAQSILAIWA QVVLMGAVEGYRIAGGPLG
Sbjct: 123 VKFGEAVWFKAGAQIFSDGGLDYLGNSSLVHAQSILAIWATQVVLMGAVEGYRIAGGPLG 182
Query: 182 EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL
Sbjct: 183 EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 242
Query: 242 ADHLADPVNNNAWAYATNFVPGK 264
AD LADPVNNNAW YATNFVPGK
Sbjct: 243 ADPLADPVNNNAWPYATNFVPGK 265
>gi|326496044|dbj|BAJ90643.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326503592|dbj|BAJ86302.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 265
Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/267 (88%), Positives = 250/267 (93%), Gaps = 5/267 (1%)
Query: 1 MATSTMALSSSFVGKAV-NLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MAT+TM+LSS+F GK+V N+A S L R++MRKT +K+ VSSGSPWYG DRV YL
Sbjct: 1 MATTTMSLSSAFAGKSVKNVASSA--LFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYL 58
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 59 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 118
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 119 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 178
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 179 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 239 LENLADHLADPVNNNAWAFATNFVPGK 265
>gi|115789|sp|P04780.1|CB22_PETSP RecName: Full=Chlorophyll a-b binding protein 22L, chloroplastic;
AltName: Full=LHCII type I CAB-22L; Short=LHCP; Flags:
Precursor
gi|20475|emb|CAA26212.1| unnamed protein product [Petunia sp.]
Length = 267
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/267 (86%), Positives = 247/267 (92%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TMALSSS F GK V L+PS +E++ G+ +MRKT +K+ VSSGSPWYGPDRVKYL
Sbjct: 1 MAAATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVW KAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAG 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLG V DPLYPGGSFDPLGLA+DPEAFAELKVKE KNGRLAMFSMFGFF+QAIVTGKGP
Sbjct: 181 GPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHL DPVNNNAW+YATNFVP K
Sbjct: 241 LENLADHLVDPVNNNAWSYATNFVPRK 267
>gi|168296|gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor [Lemna gibba]
Length = 266
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 237/265 (89%), Positives = 247/265 (93%), Gaps = 3/265 (1%)
Query: 3 TSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGS--KSVSSGSPWYGPDRVKYLGP 59
++MALSS S VGKAV LAP+ +E+ GR+SMRKT K VSSGSPWYGPDRVKYLGP
Sbjct: 2 AASMALSSPSLVGKAVKLAPAASEVFGEGRVSMRKTAGKPKPVSSGSPWYGPDRVKYLGP 61
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEF GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 62 FSGEAPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVFPELLAR 121
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AGGP
Sbjct: 122 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAVEGYRVAGGP 181
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 182 LGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 241
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 242 NLADHLADPVNNNAWAFATNFVPGK 266
>gi|3928140|emb|CAA10284.1| chlorophyll a/b binding protein [Cicer arietinum]
Length = 266
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 237/267 (88%), Positives = 246/267 (92%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVKYL 57
MA S+MALSS + GK V L+PS EL R +MRK T K SSGSPWYGPDRVKYL
Sbjct: 1 MAASSMALSSPTLAGKPVKLSPSSQEL-GASRFTMRKSATTKKVASSGSPWYGPDRVKYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 60 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 120 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAVEGYRIAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 240 LENLADHLSDPVNNNAWAYATNFVPGK 266
>gi|357132518|ref|XP_003567877.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357132520|ref|XP_003567878.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357132522|ref|XP_003567879.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 3 [Brachypodium distachyon]
gi|357132524|ref|XP_003567880.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 4 [Brachypodium distachyon]
gi|357132526|ref|XP_003567881.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 5 [Brachypodium distachyon]
Length = 263
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/267 (89%), Positives = 248/267 (92%), Gaps = 7/267 (2%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MAT+TMALSSS F GKAV P+ E RI+MRKT +K+ VSSGSPWYG DRV YL
Sbjct: 1 MATATMALSSSTFAGKAVKNLPALGE----ARITMRKTVAKAKPVSSGSPWYGSDRVLYL 56
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 57 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 116
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 117 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 176
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 177 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 236
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 237 LENLADHLADPVNNNAWAFATNFVPGK 263
>gi|359480215|ref|XP_002273106.2| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
[Vitis vinifera]
Length = 263
Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/265 (90%), Positives = 246/265 (92%), Gaps = 7/265 (2%)
Query: 4 STMALSSSFVGKAVNLAPSGNELSN----GGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
+TMALSS FVGK V L P G E S+ GRISMRK+ +K SGSPWYGPDRVKYLGP
Sbjct: 2 ATMALSSPFVGKVVPLNP-GTEFSSKVRGDGRISMRKSFAKP--SGSPWYGPDRVKYLGP 58
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL+R
Sbjct: 59 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSR 118
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAGAQIFSEGGLDYLGNP L+HAQSILAIWACQV+LMGAVEGYRI GGP
Sbjct: 119 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPGLVHAQSILAIWACQVILMGAVEGYRIGGGP 178
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 179 LGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 238
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 239 NLADHLADPVNNNAWAYATNFVPGK 263
>gi|158523323|gb|ABW70800.1| chloroplast light harvesting chlorophyll a/b binding protein
[Populus euphratica]
Length = 263
Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/265 (90%), Positives = 247/265 (93%), Gaps = 3/265 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA +TMALSS S GKAV L P +E+ G ISMRKT +K V SGSPWYGPDRVKYLGP
Sbjct: 1 MAAATMALSSPSLAGKAVKLNPF-SEIMGNGCISMRKT-TKPVPSGSPWYGPDRVKYLGP 58
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 59 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 118
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 119 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 178
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSM GFFVQAIVTGKGPLE
Sbjct: 179 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMLGFFVQAIVTGKGPLE 238
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 239 NLADHLADPVNNNAWAYATNFVPGK 263
>gi|388503990|gb|AFK40061.1| unknown [Medicago truncatula]
Length = 266
Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/267 (88%), Positives = 244/267 (91%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVKYL 57
MA S+MALSS + GK V L PS EL R +MRK T K SSGSPWYGPDRVKYL
Sbjct: 1 MAASSMALSSPTLAGKPVKLTPSSQEL-GAARFTMRKAATTKKVASSGSPWYGPDRVKYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 60 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAG
Sbjct: 120 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 LENLADHLADPVNNNAWAYATNFVPGK 266
>gi|3293555|gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]
Length = 266
Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/267 (88%), Positives = 244/267 (91%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVKYL 57
MA S+MALSS + GK V L PS EL R +MRK T K SSGSPWYGPDRVKYL
Sbjct: 1 MAASSMALSSPTLAGKPVKLTPSSQEL-GAARFTMRKSATTKKVASSGSPWYGPDRVKYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 60 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAG
Sbjct: 120 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 LENLADHLADPVNNNAWAYATNFVPGK 266
>gi|359806638|ref|NP_001241277.1| uncharacterized protein LOC100805310 [Glycine max]
gi|255647962|gb|ACU24438.1| unknown [Glycine max]
Length = 263
Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/251 (92%), Positives = 240/251 (95%), Gaps = 3/251 (1%)
Query: 14 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 73
GKAV L PS E+ GR+SMRKT +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP
Sbjct: 16 GKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 72
Query: 74 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 133
GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG
Sbjct: 73 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG 132
Query: 134 AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSF 193
+QIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGPLGEVTDP+YPGGSF
Sbjct: 133 SQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSF 192
Query: 194 DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
DPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA
Sbjct: 193 DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 252
Query: 254 WAYATNFVPGK 264
WAYATNFVPGK
Sbjct: 253 WAYATNFVPGK 263
>gi|31753114|gb|AAH53854.1| Unknown (protein for IMAGE:5194336), partial [Homo sapiens]
gi|111494016|gb|AAI11385.1| Unknown (protein for IMAGE:5198300), partial [Homo sapiens]
Length = 287
Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/267 (88%), Positives = 248/267 (92%), Gaps = 4/267 (1%)
Query: 1 MATSTMALS-SSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MAT+ MALS SSF GKAV PS + L R++MRKT +K+ VSSGSPWYG DRV YL
Sbjct: 22 MATTAMALSPSSFAGKAVKDLPS-SALFGEARVTMRKTAAKAKPVSSGSPWYGSDRVLYL 80
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 81 GPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 140
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 141 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 200
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 201 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 260
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 261 LENLADHLSDPVNNNAWAFATNFVPGK 287
>gi|297306780|dbj|BAJ08392.1| light harvesting chlorophyll a/b-binding protein Lhcb1 [Hordeum
vulgare subsp. vulgare]
Length = 266
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/267 (88%), Positives = 247/267 (92%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MAT+ MALSSS F GKAV PS + L R++MRKT +K+ VSS SPWYG DRV YL
Sbjct: 1 MATTAMALSSSSFAGKAVKDLPS-SALFGEARVTMRKTAAKAKPVSSSSPWYGSDRVLYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 60 GPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 240 LENLADHLADPVNNNAWAFATNFVPGK 266
>gi|224068679|ref|XP_002302798.1| predicted protein [Populus trichocarpa]
gi|222844524|gb|EEE82071.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/265 (89%), Positives = 240/265 (90%), Gaps = 4/265 (1%)
Query: 4 STMALSSSFVGKAVNLAP----SGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
++M LSS+F KAV L S GR+SMRK K SGSPWYGPDRVKYLGP
Sbjct: 2 ASMTLSSTFTSKAVPLNGITEFSSATCCGNGRVSMRKAAGKVADSGSPWYGPDRVKYLGP 61
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 62 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 121
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 122 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 181
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 182 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 241
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 242 NLADHLADPVNNNAWAYATNFVPGK 266
>gi|148514659|gb|ABQ81857.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 265
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/266 (88%), Positives = 247/266 (92%), Gaps = 3/266 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK-SVSSGSPWYGPDRVKYLG 58
MAT+TMALSS +F GKAV PS + L R++MRKTG+K +SGSPWYGPDRV YLG
Sbjct: 1 MATTTMALSSPAFAGKAVKNVPS-SALFGEARVTMRKTGAKPKATSGSPWYGPDRVLYLG 59
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
P SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 60 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 119
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
RNGV+FGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG
Sbjct: 120 RNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 179
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG GP+
Sbjct: 180 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGNGPI 239
Query: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 ENLADHLADPVNNNAWAYATNFVPGK 265
>gi|302566696|gb|ADL41158.1| chloroplast light-harvesting chlorophyll a/b binding protein
[Triticum aestivum]
Length = 266
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/267 (88%), Positives = 248/267 (92%), Gaps = 4/267 (1%)
Query: 1 MATSTMALS-SSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MAT+ MALS SSF GKAV PS + L R++MRKT +K+ VSSGSPWYG DRV YL
Sbjct: 1 MATTAMALSPSSFAGKAVKDLPS-SALFGEARVTMRKTAAKAKPVSSGSPWYGSDRVLYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 60 GPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 240 LENLADHLSDPVNNNAWAFATNFVPGK 266
>gi|148514657|gb|ABQ81856.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 265
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/266 (89%), Positives = 247/266 (92%), Gaps = 3/266 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK-SVSSGSPWYGPDRVKYLG 58
MAT+TM LSS +F GKAV PS + L R++MRKTG+K V+SGSPWYGPDRV YLG
Sbjct: 1 MATTTMTLSSPAFAGKAVKNMPS-SALFGDARMTMRKTGAKPKVASGSPWYGPDRVLYLG 59
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
P SGEPPSYLTGEF GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 60 PLSGEPPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 119
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
RNGV+FGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG
Sbjct: 120 RNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 179
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 180 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 239
Query: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 ENLADHLADPVNNNAWAYATNFVPGK 265
>gi|326523787|dbj|BAJ93064.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/267 (87%), Positives = 247/267 (92%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK--SVSSGSPWYGPDRVKYL 57
MA +TM+LSS +F GKAV PS + L R++MRKT +K V+SGSPWYG DRV YL
Sbjct: 1 MAATTMSLSSPAFAGKAVKNLPS-SSLFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 60 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 240 LENLADHLSDPVNNNAWAFATNFVPGK 266
>gi|1657859|gb|AAB18209.1| chlorophyll a/b-binding protein WCAB precursor [Triticum aestivum]
Length = 266
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/267 (87%), Positives = 247/267 (92%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TM+LSSS F GKAV PS L R++MRKT +K+ VSSGSPWYG DRV YL
Sbjct: 1 MAAATMSLSSSTFAGKAVKNVPSLALLGEA-RVTMRKTAAKAKQVSSGSPWYGADRVLYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 60 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+ DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEIVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 240 LENLADHIADPVNNNAWAFATNFVPGK 266
>gi|115800|sp|P09756.1|CB23_SOYBN RecName: Full=Chlorophyll a-b binding protein 3, chloroplastic;
AltName: Full=LHCII type I CAB-3; Short=LHCP; Flags:
Precursor
gi|18552|emb|CAA31419.1| chlorophyll a/b binding preprotein (AA - 32 to 231) [Glycine max]
Length = 263
Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/251 (92%), Positives = 239/251 (95%), Gaps = 3/251 (1%)
Query: 14 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 73
GKAV L PS E+ GR+SMRKT +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP
Sbjct: 16 GKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 72
Query: 74 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 133
GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG
Sbjct: 73 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG 132
Query: 134 AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSF 193
+QIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGPLGEVTDP+YPGGSF
Sbjct: 133 SQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSF 192
Query: 194 DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
DPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA PVNNNA
Sbjct: 193 DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNNA 252
Query: 254 WAYATNFVPGK 264
WAYATNFVPGK
Sbjct: 253 WAYATNFVPGK 263
>gi|449461699|ref|XP_004148579.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Cucumis sativus]
gi|449518125|ref|XP_004166094.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Cucumis sativus]
Length = 265
Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/264 (86%), Positives = 244/264 (92%), Gaps = 3/264 (1%)
Query: 4 STMALSSSFVGKAVNL---APSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
+ MALSS+F GK V L + + + GR++MRK+G + SSGSPWYGPDRVKYLGPF
Sbjct: 2 AAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGPF 61
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
SGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RN
Sbjct: 62 SGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 121
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL 180
GVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAGGPL
Sbjct: 122 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPL 181
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
GE+TDP+YPGGSFDPLGLADDPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 182 GEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 241
Query: 241 LADHLADPVNNNAWAYATNFVPGK 264
LADHLADPVNNNAWAYATNFVPGK
Sbjct: 242 LADHLADPVNNNAWAYATNFVPGK 265
>gi|413968348|gb|AFW90512.1| chlorophyll a/b-binding protein [Phaseolus vulgaris]
Length = 263
Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/251 (91%), Positives = 239/251 (95%), Gaps = 3/251 (1%)
Query: 14 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 73
GKAV LAPS E+ GR+SMRKT +K SSGSPWYGPDRVKYLGPFSGE PSYLTGEFP
Sbjct: 16 GKAVKLAPSAPEV---GRVSMRKTVTKQASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFP 72
Query: 74 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 133
GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG
Sbjct: 73 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG 132
Query: 134 AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSF 193
+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGE+TDP+YPGGSF
Sbjct: 133 SQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEITDPIYPGGSF 192
Query: 194 DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
DPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA
Sbjct: 193 DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 252
Query: 254 WAYATNFVPGK 264
WAYATNFVPGK
Sbjct: 253 WAYATNFVPGK 263
>gi|255646685|gb|ACU23816.1| unknown [Glycine max]
Length = 263
Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/251 (91%), Positives = 239/251 (95%), Gaps = 3/251 (1%)
Query: 14 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 73
GKAV L PS E+ GR+SMRKT +K SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP
Sbjct: 16 GKAVKLGPSAPEV---GRVSMRKTVTKQASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 72
Query: 74 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 133
GDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG
Sbjct: 73 GDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG 132
Query: 134 AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSF 193
+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEVTDP+YPGGSF
Sbjct: 133 SQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSF 192
Query: 194 DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
DPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA
Sbjct: 193 DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 252
Query: 254 WAYATNFVPGK 264
WAYATNFVPGK
Sbjct: 253 WAYATNFVPGK 263
>gi|219879136|gb|ACL50948.1| putative chloroplast chlorophyll a/b binding protein [Solanum
nigrum]
Length = 249
Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/245 (92%), Positives = 235/245 (95%)
Query: 20 APSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 79
+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWD
Sbjct: 5 SPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 64
Query: 80 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 139
TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSE
Sbjct: 65 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 124
Query: 140 GGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 199
GGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA
Sbjct: 125 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 184
Query: 200 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 259
DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATN
Sbjct: 185 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATN 244
Query: 260 FVPGK 264
FVPGK
Sbjct: 245 FVPGK 249
>gi|6716783|gb|AAF26741.1|AF220527_1 chlorophyll a/b binding protein precursor [Euphorbia esula]
Length = 268
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/255 (90%), Positives = 241/255 (94%), Gaps = 2/255 (0%)
Query: 12 FVGKAVNLAPS-GNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLT 69
F G+AV L+PS +EL GR+SMRK +K V+ SGSPWYGPDRVKYLGPFSGEPPSYLT
Sbjct: 14 FAGQAVKLSPSSASELMGNGRVSMRKAATKKVAPSGSPWYGPDRVKYLGPFSGEPPSYLT 73
Query: 70 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 129
GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVW
Sbjct: 74 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVW 133
Query: 130 FKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYP 189
FKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DP+YP
Sbjct: 134 FKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPIYP 193
Query: 190 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 249
GGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPV
Sbjct: 194 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLFDPV 253
Query: 250 NNNAWAYATNFVPGK 264
NNNAWA+ATNFVPGK
Sbjct: 254 NNNAWAFATNFVPGK 268
>gi|157786302|gb|ABN49454.2| chloroplast chlorophyll a/b binding protein [Pisum sativum]
Length = 266
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/267 (87%), Positives = 244/267 (91%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVKYL 57
MA S+MALSS + GK V L PS EL G R +MRK T K SSGSPWYGPDRVKYL
Sbjct: 1 MAASSMALSSPTLTGKPVKLNPSSQEL-GGARFTMRKSATTKKVASSGSPWYGPDRVKYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL
Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAG
Sbjct: 120 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHL+DPVNNNAW+YATNFVPGK
Sbjct: 240 LENLADHLSDPVNNNAWSYATNFVPGK 266
>gi|115785|sp|P08963.1|CB22_HORVU RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic;
AltName: Full=LHCII type I CAB-2; Short=LHCP; Flags:
Precursor
gi|18943|emb|CAA31232.1| LHC precursor protein (AA -34 to 230) [Hordeum vulgare]
Length = 264
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/265 (87%), Positives = 242/265 (91%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA +TMALSSS F GKAV S +E+ R+SMRKT + + GSPWYGPDRVKYLGP
Sbjct: 1 MAAATMALSSSTFAGKAVKNLSSSSEVQGDARVSMRKTAA-TKKVGSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 60 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLAR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFK G+QIFSEGGL YLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGP
Sbjct: 120 NGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEV DPLYPGGSFDPLGLADD EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 240 NLADHLADPVNNNAWAFATNFVPGK 264
>gi|357118764|ref|XP_003561119.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357118766|ref|XP_003561120.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357118768|ref|XP_003561121.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 3 [Brachypodium distachyon]
Length = 266
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/267 (87%), Positives = 247/267 (92%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TM+LSSS F GKAV PS + L R++MRKT +K+ VSSGSPWYG DRV YL
Sbjct: 1 MAATTMSLSSSAFAGKAVKNLPS-SALFGEARVTMRKTAAKAKPVSSGSPWYGSDRVLYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE+IH RWAMLGALGCVFPELL
Sbjct: 60 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELELIHSRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 240 LENLADHLADPVNNNAWAFATNFVPGK 266
>gi|326488085|dbj|BAJ89881.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/267 (86%), Positives = 246/267 (92%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TM+LSSS F GKAV PS + L R++MRKT +K+ VSSGSPWYG DRV YL
Sbjct: 1 MAATTMSLSSSTFAGKAVKNVPS-SALFGEARVTMRKTTAKAKQVSSGSPWYGADRVLYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 60 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIF+EGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENL DH+ DPVNNNAWA+ATNFVPGK
Sbjct: 240 LENLGDHITDPVNNNAWAFATNFVPGK 266
>gi|242053513|ref|XP_002455902.1| hypothetical protein SORBIDRAFT_03g027040 [Sorghum bicolor]
gi|241927877|gb|EES01022.1| hypothetical protein SORBIDRAFT_03g027040 [Sorghum bicolor]
Length = 265
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/267 (88%), Positives = 245/267 (91%), Gaps = 5/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TMAL+S + VGK S ++ GRI+MRKT +K +SGSPWYG DRV YL
Sbjct: 1 MAGATMALTSRALVGKPATT--STRDVFGEGRITMRKTAAKPKPAASGSPWYGADRVLYL 58
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 59 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 118
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 119 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRVAG 178
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 179 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 239 LENLADHLADPVNNNAWAYATNFVPGK 265
>gi|38096045|gb|AAR10886.1| chlorophyll a/b binding protein [Trifolium pratense]
Length = 266
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/267 (87%), Positives = 244/267 (91%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVKYL 57
MA S+MAL+S + GK V L PS EL + +MRK T K SSGSPWYGPDRVKYL
Sbjct: 1 MAASSMALTSPALAGKPVKLTPSSQELGVA-KFTMRKGATTKKVASSGSPWYGPDRVKYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 60 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAG
Sbjct: 120 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 240 LENLADHLADPVNNNAWAFATNFVPGK 266
>gi|8954293|gb|AAD27879.2|AF139467_1 LHCII type I chlorophyll a/b binding protein [Vigna radiata]
Length = 263
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/254 (90%), Positives = 239/254 (94%), Gaps = 3/254 (1%)
Query: 11 SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTG 70
SF GKAV LAPS E+ GR SMRKT +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTG
Sbjct: 13 SFAGKAVKLAPSAPEV---GRASMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTG 69
Query: 71 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 130
EFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALG VFPE L+RNGVKFGEAVWF
Sbjct: 70 EFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGIVFPEPLSRNGVKFGEAVWF 129
Query: 131 KAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPG 190
KAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGPLGEVTDP YPG
Sbjct: 130 KAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPTYPG 189
Query: 191 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 250
GSFDPLGLADDPEAFAELKVKE+KNGRLAMFS+FGFFVQAIVTGKGPLENLADHLADPVN
Sbjct: 190 GSFDPLGLADDPEAFAELKVKELKNGRLAMFSVFGFFVQAIVTGKGPLENLADHLADPVN 249
Query: 251 NNAWAYATNFVPGK 264
NNAWAYATNFVPGK
Sbjct: 250 NNAWAYATNFVPGK 263
>gi|115778|sp|P13851.1|CB21_SINAL RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
Precursor
gi|21138|emb|CAA34459.1| unnamed protein product [Sinapis alba]
gi|21140|emb|CAA33903.1| chlorophyll a/b-binding polypeptide [Sinapis alba]
Length = 266
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/266 (87%), Positives = 245/266 (92%), Gaps = 2/266 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS +F GKAV L+P +E+ GR++MRKT + SGSPWYG DRVKYLGP
Sbjct: 1 MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-G 178
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEG 180
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGE D LYPGGSFDPLGLA DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266
>gi|326493298|dbj|BAJ85110.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326493328|dbj|BAJ85125.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/267 (86%), Positives = 246/267 (92%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TM+LSSS F K V PS + L R++MRKT +K+ VSSGSPWYG DRV YL
Sbjct: 1 MAATTMSLSSSSFARKMVENIPS-SALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 60 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADH+ADP+NNNAWA+ATNFVPGK
Sbjct: 240 LENLADHIADPINNNAWAFATNFVPGK 266
>gi|18266039|gb|AAL67432.1|AF458406_1 chlorophyll a/b binding protein [Brassica oleracea]
Length = 266
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/266 (87%), Positives = 245/266 (92%), Gaps = 2/266 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS +F GKAV L+P +E+ GR++MRKT + SGSPWYG DRVKYLGP
Sbjct: 1 MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-G 178
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEG 180
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGE D LYPGGSFDPLGLA DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLAADPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266
>gi|122831060|gb|ABM66819.1| chloroplast light-harvesting chlorophyll a/b binding protein
[Bambusa oldhamii]
Length = 265
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/266 (88%), Positives = 244/266 (91%), Gaps = 3/266 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK-SVSSGSPWYGPDRVKYLG 58
MAT+TMALSS +F GKAV PS L R++MRKTG+K +SGSPWYGPDRV YLG
Sbjct: 1 MATTTMALSSPAFAGKAVKNVPSSG-LFGEARMTMRKTGAKPKAASGSPWYGPDRVLYLG 59
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
P SGEPPSYLTGEF GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 60 PLSGEPPSYLTGEFAGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 119
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG
Sbjct: 120 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 179
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 180 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 239
Query: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
ENLADHLADPVNNNAWAY NFVPGK
Sbjct: 240 ENLADHLADPVNNNAWAYVPNFVPGK 265
>gi|56809379|gb|AAW31511.1| light-harvesting chlorophyll-a/b binding protein Lhcb1 [Pisum
sativum]
Length = 266
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/267 (86%), Positives = 244/267 (91%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVKYL 57
MA S+MALSS + GK V L PS EL G R +MRK T K SSGSPWYGPDRVKYL
Sbjct: 1 MAASSMALSSPTLTGKPVKLNPSSQEL-GGARFTMRKSATTKKVASSGSPWYGPDRVKYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL
Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAG
Sbjct: 120 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHL+DPVNNNAW+YATNFVPGK
Sbjct: 240 LENLADHLSDPVNNNAWSYATNFVPGK 266
>gi|14423661|sp|P92919.1|CB23_APIGR RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Allergen=Api g 3; Flags: Precursor
gi|1769849|emb|CAA99993.1| chlorophyll a/b binding protein [Apium graveolens]
Length = 264
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/265 (87%), Positives = 245/265 (92%), Gaps = 2/265 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS + GKAV +APS +EL GR+SMRKT K+ S SPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSPALAGKAVKVAPSSSELFGNGRVSMRKT-VKAPVSDSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 60 FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSIL+IWA QV+LMGAVEGYR+AGGP
Sbjct: 120 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGP 179
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGE+ DPLYPGGSFDPLGLA+DPE AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 180 LGEIVDPLYPGGSFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 240 NLADHLADPVNNNAWAFATNFVPGK 264
>gi|357152998|ref|XP_003576305.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357153000|ref|XP_003576306.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357153003|ref|XP_003576307.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
isoform 3 [Brachypodium distachyon]
Length = 266
Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/267 (86%), Positives = 246/267 (92%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TM+LSS +F GKAV PS + L R++MRKT +K+ V SGSPWYG DRV YL
Sbjct: 1 MAATTMSLSSPAFAGKAVKNLPS-SALFGEARVTMRKTAAKAKPVPSGSPWYGADRVLYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 60 GPLSGQPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADH+ DPVNNNAWA+ATNFVPGK
Sbjct: 240 LENLADHITDPVNNNAWAFATNFVPGK 266
>gi|326497177|dbj|BAK02173.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/267 (86%), Positives = 246/267 (92%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TM+LSSS F GKAV P + L R++MRKT +K+ +SS +PWYG DRV YL
Sbjct: 1 MAATTMSLSSSTFAGKAVKNVPL-SALFGEARVTMRKTAAKAKQLSSSNPWYGADRVLYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 60 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 240 LENLADHIADPVNNNAWAFATNFVPGK 266
>gi|351724927|ref|NP_001235283.1| chlorophyll a/b-binding protein [Glycine max]
gi|1053216|gb|AAA80688.1| chlorophyll a/b-binding protein [Glycine max]
Length = 263
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/251 (90%), Positives = 238/251 (94%), Gaps = 3/251 (1%)
Query: 14 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 73
GKAV L PS E+ GR+SMRKT +K SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP
Sbjct: 16 GKAVKLGPSAPEV---GRVSMRKTVTKQASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 72
Query: 74 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 133
GDYGWDTAGLSADPETFA+N ELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG
Sbjct: 73 GDYGWDTAGLSADPETFARNPELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG 132
Query: 134 AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSF 193
+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEVTDP+YPGGSF
Sbjct: 133 SQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSF 192
Query: 194 DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
DPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA
Sbjct: 193 DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 252
Query: 254 WAYATNFVPGK 264
WAYATNFVPGK
Sbjct: 253 WAYATNFVPGK 263
>gi|413968514|gb|AFW90594.1| chloroplast chlorophyll a/b binding protein [Solanum tuberosum]
Length = 276
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/263 (87%), Positives = 239/263 (90%), Gaps = 1/263 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA +TMALSS SF G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGP
Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC FPELLAR
Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCDFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS FGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSTFGFFVQAIVTGKGPLE 240
Query: 240 NLADHLADPVNNNAWAYATNFVP 262
NLADHLADPVNNNA P
Sbjct: 241 NLADHLADPVNNNACPTPQTLSP 263
>gi|326509659|dbj|BAJ87045.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/267 (85%), Positives = 245/267 (91%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TM+LSSS F K V PS + L R++MRKT +K+ VSSGSPWYG DRV YL
Sbjct: 1 MAATTMSLSSSSFARKMVENIPS-SALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 60 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPS +HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSFVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADH+ADP+NNNAWA+ATNFVPGK
Sbjct: 240 LENLADHIADPINNNAWAFATNFVPGK 266
>gi|226502967|ref|NP_001142284.1| uncharacterized protein LOC100274453 [Zea mays]
gi|194708004|gb|ACF88086.1| unknown [Zea mays]
gi|195613594|gb|ACG28627.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|413950532|gb|AFW83181.1| light harvesting chlorophyll a/b binding protein1 isoform 1 [Zea
mays]
gi|413950533|gb|AFW83182.1| light harvesting chlorophyll a/b binding protein1 isoform 2 [Zea
mays]
Length = 264
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/267 (87%), Positives = 244/267 (91%), Gaps = 6/267 (2%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TMAL+S + VGK A S ++ GRI+MRKT K +SGSPWYG DRV YL
Sbjct: 1 MAAATMALTSRALVGKP---ATSTRDVFGEGRITMRKTAGKPKPAASGSPWYGADRVLYL 57
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 58 GPLSGQPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 118 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 178 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 238 VENLADHLADPVNNNAWAYATNFVPGK 264
>gi|326499874|dbj|BAJ90772.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/267 (86%), Positives = 245/267 (91%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TM+LSS +F GKAV S + L R++MRKT +K+ V+S SPWYG DRV YL
Sbjct: 1 MAAATMSLSSPAFAGKAVKNV-SLSALFGEARVTMRKTTAKAKQVASSSPWYGADRVLYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 60 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADH+ DPVNNNAWA+ATNFVPGK
Sbjct: 240 LENLADHITDPVNNNAWAFATNFVPGK 266
>gi|385298939|gb|AFI60242.1| light harvesting chlorophyll a/b binding protein, partial [Panicum
virgatum]
Length = 260
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/263 (88%), Positives = 242/263 (92%), Gaps = 6/263 (2%)
Query: 5 TMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFS 61
TM LSS+ F GKAVN+ S L R++MRKT +K +SGSPWYGPDRV YLGP S
Sbjct: 1 TMGLSSTAFAGKAVNVPSS---LFGEARVTMRKTAAKPKPAASGSPWYGPDRVLYLGPLS 57
Query: 62 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 121
GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNG
Sbjct: 58 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 117
Query: 122 VKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG 181
VKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG
Sbjct: 118 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG 177
Query: 182 EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
EV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENL
Sbjct: 178 EVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 237
Query: 242 ADHLADPVNNNAWAYATNFVPGK 264
ADHLADPVNNNAWAYATNFVPGK
Sbjct: 238 ADHLADPVNNNAWAYATNFVPGK 260
>gi|242088861|ref|XP_002440263.1| hypothetical protein SORBIDRAFT_09g028720 [Sorghum bicolor]
gi|241945548|gb|EES18693.1| hypothetical protein SORBIDRAFT_09g028720 [Sorghum bicolor]
Length = 265
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 238/268 (88%), Positives = 247/268 (92%), Gaps = 7/268 (2%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVS---SGSPWYGPDRVKY 56
MA+STMALSS+ F GKAVN+ S L R++MRKT +K+ SGSPWYGPDRV Y
Sbjct: 1 MASSTMALSSTAFAGKAVNVPSS---LFGEARVTMRKTAAKAKPAAASGSPWYGPDRVLY 57
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 58 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 117
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
LARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 177
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
GGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264
PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|115771|sp|P12329.1|CB21_MAIZE RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
Precursor
gi|22224|emb|CAA32900.1| unnamed protein product [Zea mays]
gi|194699340|gb|ACF83754.1| unknown [Zea mays]
gi|195607416|gb|ACG25538.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|195613460|gb|ACG28560.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|414886622|tpg|DAA62636.1| TPA: light harvesting chlorophyll a/b binding protein2 [Zea mays]
Length = 262
Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/267 (86%), Positives = 242/267 (90%), Gaps = 8/267 (2%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKT--GSKSVSSGSPWYGPDRVKYL 57
MA STMA+SS+ G + + G GRI+MRKT K +SGSPWYGPDRVKYL
Sbjct: 1 MAASTMAISSTAMAGTPIKVGSFGE-----GRITMRKTVGKPKVAASGSPWYGPDRVKYL 55
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 56 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 115
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 116 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 175
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 176 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 235
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADH+ADPVNNNAWAYATNFVPG
Sbjct: 236 LENLADHIADPVNNNAWAYATNFVPGN 262
>gi|349443|gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein of photosystem II
[Ginkgo biloba]
Length = 270
Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/270 (86%), Positives = 249/270 (92%), Gaps = 9/270 (3%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG----GRISMRKTGSKSV--SSGSPWYGPDRV 54
MA++ +A SS+F G+ V L P NE G GRI+MRKT SK V SSGSPWYGPDRV
Sbjct: 4 MASAGVA-SSAFAGQIV-LKPQ-NEFVGGVHGEGRITMRKTASKKVVASSGSPWYGPDRV 60
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP
Sbjct: 61 KYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 120
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
ELL+RNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYR
Sbjct: 121 ELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYR 180
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
IAGGPLGE+TDP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 181 IAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 240
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 KGPIENLADHLADPVNNNAWAFATNFVPGK 270
>gi|326506218|dbj|BAJ86427.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/267 (86%), Positives = 244/267 (91%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TM+LSS +F GKAV S + L R++MRKT +K+ V+S SPWYG DRV YL
Sbjct: 1 MAAATMSLSSPAFAGKAVKNV-SLSALFGEARVTMRKTTAKAKQVASSSPWYGADRVLYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 60 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQ VLMGAVEGYRIAG
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQAVLMGAVEGYRIAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADH+ DPVNNNAWA+ATNFVPGK
Sbjct: 240 LENLADHITDPVNNNAWAFATNFVPGK 266
>gi|194700378|gb|ACF84273.1| unknown [Zea mays]
gi|195619060|gb|ACG31360.1| chlorophyll a-b binding protein 2 [Zea mays]
Length = 266
Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/268 (88%), Positives = 248/268 (92%), Gaps = 6/268 (2%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVS---SGSPWYGPDRVKY 56
MA+STMALSS+ F GKAVN+ PS + R++MRKT +K+ SGSPWYGPDRV Y
Sbjct: 1 MASSTMALSSTAFAGKAVNV-PSSSAFGEA-RVTMRKTAAKAKPAAASGSPWYGPDRVLY 58
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 59 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 118
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
LARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA
Sbjct: 119 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 178
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
GGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 179 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 238
Query: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264
PLENLADH+ADPVNNNAWAYATNFVPGK
Sbjct: 239 PLENLADHIADPVNNNAWAYATNFVPGK 266
>gi|115814|sp|P27490.1|CB28_PEA RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;
AltName: Full=LHCII type I CAB-8; Flags: Precursor
gi|20669|emb|CAA39883.1| chlorophyll a/b binding protein [Pisum sativum]
Length = 268
Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/269 (86%), Positives = 244/269 (90%), Gaps = 6/269 (2%)
Query: 1 MATSTMALSS-SFVGKAVNLA--PSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVK 55
MA S+MALSS + GK V + PS EL G R +MRK T K SSGSPWYGPDRVK
Sbjct: 1 MAASSMALSSPTLTGKPVETSANPSSQEL-GGARFTMRKSATTKKVASSGSPWYGPDRVK 59
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPE
Sbjct: 60 YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPE 119
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRI
Sbjct: 120 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRI 179
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 180 AGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 239
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GPLENLADHL+DPVNNNAW+YATNFVPGK
Sbjct: 240 GPLENLADHLSDPVNNNAWSYATNFVPGK 268
>gi|109389998|gb|ABG29728.1| chloroplast chlorophyll a/b binding protein [Brassica napus]
Length = 267
Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/267 (86%), Positives = 246/267 (92%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLG 58
MA STMALSS +F GKAV L+P+ +E+ GR++MRKT +K SGSPWYG +RVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NREL+VIHCRWAMLGALGCVFPELLA
Sbjct: 61 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELQVIHCRWAMLGALGCVFPELLA 120
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG- 177
RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE D LYPGGSFDPLGLA DPEAFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFAQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267
>gi|242045502|ref|XP_002460622.1| hypothetical protein SORBIDRAFT_02g032040 [Sorghum bicolor]
gi|241923999|gb|EER97143.1| hypothetical protein SORBIDRAFT_02g032040 [Sorghum bicolor]
Length = 262
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/267 (86%), Positives = 242/267 (90%), Gaps = 8/267 (2%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA STM++SS+ G + + G GRI+MRKT +K +SGSPWYGPDRVKYL
Sbjct: 1 MAASTMSISSTAMAGTPIKVGSFGE-----GRITMRKTAAKPKVAASGSPWYGPDRVKYL 55
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 56 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 115
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 116 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 175
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 176 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 235
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWAYATNFVPG
Sbjct: 236 LENLADHLADPVNNNAWAYATNFVPGN 262
>gi|115478691|ref|NP_001062939.1| Os09g0346500 [Oryza sativa Japonica Group]
gi|82654917|sp|P12330.2|CB21_ORYSJ RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
Precursor
gi|50252362|dbj|BAD28469.1| putative chlorophyll a-b binding protein, chloroplast precursor
(LHCII type I CAB) (LHCP) [Oryza sativa Japonica Group]
gi|50252884|dbj|BAD29115.1| putative chlorophyll a-b binding protein, chloroplast precursor
(LHCII type I CAB) (LHCP) [Oryza sativa Japonica Group]
gi|113631172|dbj|BAF24853.1| Os09g0346500 [Oryza sativa Japonica Group]
gi|215737437|dbj|BAG96567.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737443|dbj|BAG96573.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737483|dbj|BAG96613.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765877|dbj|BAG87574.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201978|gb|EEC84405.1| hypothetical protein OsI_30987 [Oryza sativa Indica Group]
Length = 265
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/268 (87%), Positives = 243/268 (90%), Gaps = 7/268 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPS-GNELSNGGRISMRKTGSK---SVSSGSPWYGPDRVKY 56
MA +TMALSS + +A APS + L RI+MRKT +K + SSGSPWYG DRV Y
Sbjct: 1 MAAATMALSSPVMARA---APSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLY 57
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 58 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 117
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
LARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIA
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIA 177
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
GGPLGEV DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264
PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|194703220|gb|ACF85694.1| unknown [Zea mays]
gi|195616570|gb|ACG30115.1| chlorophyll a-b binding protein 1 [Zea mays]
gi|195623468|gb|ACG33564.1| chlorophyll a-b binding protein 1 [Zea mays]
gi|413948507|gb|AFW81156.1| light harvesting chlorophyll a/b binding protein3 isoform 1 [Zea
mays]
gi|413948508|gb|AFW81157.1| light harvesting chlorophyll a/b binding protein3 isoform 2 [Zea
mays]
Length = 265
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/268 (88%), Positives = 247/268 (92%), Gaps = 7/268 (2%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSV---SSGSPWYGPDRVKY 56
MA+STMALSS+ F GKAVN+ S L R++MRKT +K+ SSGSPWYGPDRV Y
Sbjct: 1 MASSTMALSSTAFAGKAVNVPSS---LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLY 57
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 58 LGPLSGAPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 117
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
LARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA+EGYR+A
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVA 177
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
GGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264
PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|226502080|ref|NP_001147639.1| chlorophyll a-b binding protein 1, chloroplastic precursor [Zea
mays]
gi|195612774|gb|ACG28217.1| chlorophyll a-b binding protein 2 [Zea mays]
Length = 262
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/267 (86%), Positives = 242/267 (90%), Gaps = 8/267 (2%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKT--GSKSVSSGSPWYGPDRVKYL 57
MA STMA+SS+ G + + G GRI+MRKT K +SGSPWYGPDRVKYL
Sbjct: 1 MAASTMAISSTAMAGTPIKVGSFGE-----GRITMRKTVGKPKVAASGSPWYGPDRVKYL 55
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADP+TFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 56 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHSRWAMLGALGCVFPELL 115
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 116 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 175
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 176 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 235
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADH+ADPVNNNAWAYATNFVPG
Sbjct: 236 LENLADHIADPVNNNAWAYATNFVPGN 262
>gi|226263|prf||1503276A chlorophyll a/b binding protein
Length = 245
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/235 (94%), Positives = 229/235 (97%)
Query: 30 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 89
GR+SMRKT SK+VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 11 GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 70
Query: 90 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 149
FAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA WFKAG+QIFSEGGLDYLGN S
Sbjct: 71 FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEACWFKAGSQIFSEGGLDYLGNQS 130
Query: 150 LIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELK 209
LIHAQSILAIWA QV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPL LADDPEAFAELK
Sbjct: 131 LIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELK 190
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
VKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 191 VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 245
>gi|115779|sp|P12471.1|CB21_SOYBN RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|169933|gb|AAA33949.1| chlorophyll a/b-binding protein precursor, partial [Glycine max]
Length = 245
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/235 (94%), Positives = 229/235 (97%)
Query: 30 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 89
GR+SMRKT SK+VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 11 GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 70
Query: 90 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 149
FAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA WFKAG+QIFSEGGLDYLGN S
Sbjct: 71 FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQS 130
Query: 150 LIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELK 209
LIHAQSILAIWA QV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPL LADDPEAFAELK
Sbjct: 131 LIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELK 190
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA+PVNNNAWAYATNFVPGK
Sbjct: 191 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNNAWAYATNFVPGK 245
>gi|162463409|ref|NP_001105545.1| chlorophyll a-b binding protein M9, chloroplastic precursor [Zea
mays]
gi|115815|sp|P27497.1|CB29_MAIZE RecName: Full=Chlorophyll a-b binding protein M9, chloroplastic;
AltName: Full=LHCII type I CAB-M9; Short=LHCP; Flags:
Precursor
gi|22355|emb|CAA39376.1| light-harvesting chlorophyll a/b binding protein [Zea mays]
Length = 265
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/268 (87%), Positives = 248/268 (92%), Gaps = 7/268 (2%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSV---SSGSPWYGPDRVKY 56
MA+STMALSS+ F GKAVN+ S L R++MRKT +K+ SSGSPWYGPDRV Y
Sbjct: 1 MASSTMALSSTAFAGKAVNVPSS---LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLY 57
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 58 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 117
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
LARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA+EGYR+A
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVA 177
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
GGPLGEV DPLYPGG+FDPLGLADDPEAFA++KVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264
PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|226510115|ref|NP_001148439.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|195619284|gb|ACG31472.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|414881723|tpg|DAA58854.1| TPA: chlorophyll a-b binding protein 2 [Zea mays]
Length = 264
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/267 (86%), Positives = 243/267 (91%), Gaps = 6/267 (2%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TMA++S + VGK A ++ GRI+MRKT +K +SGSPWYG DRV YL
Sbjct: 1 MAAATMAITSRALVGKP---AAGTRDVFGEGRITMRKTAAKPKPAASGSPWYGADRVLYL 57
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 58 GPLSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 118 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 177
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 178 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADH+ADPVNNNAWAYATNFVPGK
Sbjct: 238 LENLADHIADPVNNNAWAYATNFVPGK 264
>gi|18403549|ref|NP_565787.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
gi|11908034|gb|AAG41446.1|AF326864_1 putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|12642854|gb|AAK00369.1|AF339687_1 putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|16366|emb|CAA45789.1| photosystem II type I chlorophyll a /b binding protein [Arabidopsis
thaliana]
gi|3128229|gb|AAC26709.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|20197164|gb|AAM14951.1| putative photosystem II type I chlorophyll a b binding protein
[Arabidopsis thaliana]
gi|21539563|gb|AAM53334.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|25083751|gb|AAN72114.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|330253879|gb|AEC08973.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
Length = 266
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/266 (85%), Positives = 243/266 (91%), Gaps = 2/266 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS + GKAV L+P+ +E+ GRI+MRK + SGSPWYG DRVKYLGP
Sbjct: 1 MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-G 178
NGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 180
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266
>gi|357496387|ref|XP_003618482.1| Chlorophyll a/b-binding protein [Medicago truncatula]
gi|355493497|gb|AES74700.1| Chlorophyll a/b-binding protein [Medicago truncatula]
Length = 265
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/266 (87%), Positives = 248/266 (93%), Gaps = 3/266 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLG 58
MA STMALSSS VGKA+ L+PS +L G RI+MRKT +K + SGS WYGPDRVKYLG
Sbjct: 1 MAASTMALSSSSMVGKAIKLSPSTPDLVMG-RITMRKTTTKKTAPSGSQWYGPDRVKYLG 59
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 60 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 119
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGG
Sbjct: 120 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGG 179
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 180 PLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 239
Query: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
+NLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 240 KNLADHIADPVNNNAWAFATNFVPGK 265
>gi|242053511|ref|XP_002455901.1| hypothetical protein SORBIDRAFT_03g027030 [Sorghum bicolor]
gi|241927876|gb|EES01021.1| hypothetical protein SORBIDRAFT_03g027030 [Sorghum bicolor]
Length = 266
Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/258 (88%), Positives = 237/258 (91%), Gaps = 4/258 (1%)
Query: 9 SSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPS 66
S + VGK S ++ GRI+MRKT +K +SGSPWYG DRV YLGPFSGEPPS
Sbjct: 11 SRALVGKPATT--STRDVFGEGRITMRKTAAKPKPAASGSPWYGADRVLYLGPFSGEPPS 68
Query: 67 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 126
YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE
Sbjct: 69 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 128
Query: 127 AVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP 186
AVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DP
Sbjct: 129 AVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP 188
Query: 187 LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 246
LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA
Sbjct: 189 LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 248
Query: 247 DPVNNNAWAYATNFVPGK 264
DPVNNNAWAYATNFVPGK
Sbjct: 249 DPVNNNAWAYATNFVPGK 266
>gi|18397286|ref|NP_564339.1| chlorophyll a-b binding protein 2/3 [Arabidopsis thaliana]
gi|18397288|ref|NP_564340.1| chlorophyll a-b binding protein 2/3 [Arabidopsis thaliana]
gi|317374860|sp|P0CJ48.1|CB1A_ARATH RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic;
AltName: Full=Chlorophyll a-b protein 165;
Short=CAB-165; AltName: Full=LHCII type I CAB-2; Flags:
Precursor
gi|317374942|sp|Q8VZ87.2|CB1B_ARATH RecName: Full=Chlorophyll a-b binding protein 3, chloroplastic;
AltName: Full=Chlorophyll a-b protein 180;
Short=CAB-180; AltName: Full=LHCII type I CAB-3; Flags:
Precursor
gi|9972354|gb|AAG10604.1|AC008030_4 chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|9972355|gb|AAG10605.1|AC008030_5 chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|16368|emb|CAA27540.1| chlorophyll a/b binding protein (LHCP AB 65) [Arabidopsis thaliana]
gi|16372|emb|CAA27541.1| chlorophyll a/b binding protein (LHCP AB 180) [Arabidopsis
thaliana]
gi|15529226|gb|AAK97707.1| At1g29920/F1N18_80 [Arabidopsis thaliana]
gi|15809862|gb|AAL06859.1| At1g29920/F1N18_80 [Arabidopsis thaliana]
gi|16974375|gb|AAL31113.1| At1g29920/F1N18_80 [Arabidopsis thaliana]
gi|17065476|gb|AAL32892.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|20148487|gb|AAM10134.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|21555860|gb|AAM63949.1| photosystem II type I chlorophyll a /b binding protein, putative
[Arabidopsis thaliana]
gi|22135932|gb|AAM91548.1| photosystem II type I chlorophyll a/b binding protein, putative
[Arabidopsis thaliana]
gi|23397170|gb|AAN31868.1| putative photosystem II type I chlorophyll a /b binding protein
[Arabidopsis thaliana]
gi|332193028|gb|AEE31149.1| chlorophyll a-b binding protein 2/3 [Arabidopsis thaliana]
gi|332193029|gb|AEE31150.1| chlorophyll a-b binding protein 2/3 [Arabidopsis thaliana]
Length = 267
Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/267 (85%), Positives = 246/267 (92%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLG 58
MA STMALSS +F GKAVNL+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG- 177
RNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267
>gi|146403796|gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Artemisia annua]
Length = 254
Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/253 (89%), Positives = 235/253 (92%), Gaps = 2/253 (0%)
Query: 14 GKAVNLAPSGNELSNGGRISMRKTGS--KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 71
G+AV APS +EL GR+SMRKT + K SGSPWYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 2 GQAVKAAPSNSELLGNGRVSMRKTAAPKKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTGE 61
Query: 72 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 131
FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK
Sbjct: 62 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 121
Query: 132 AGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGG 191
AGAQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGG
Sbjct: 122 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 181
Query: 192 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 251
SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLAD LADPV N
Sbjct: 182 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADRLADPVAN 241
Query: 252 NAWAYATNFVPGK 264
NAW+YATNFVPGK
Sbjct: 242 NAWSYATNFVPGK 254
>gi|414881719|tpg|DAA58850.1| TPA: chlorophyll a-b binding protein 48, Precursor [Zea mays]
Length = 264
Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/267 (85%), Positives = 242/267 (90%), Gaps = 6/267 (2%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TMA++S + VGK A ++ GRI+MRKT +K +SGSPWYG DRV YL
Sbjct: 1 MAAATMAITSRALVGKP---AAGTRDVFGEGRITMRKTAAKPKPAASGSPWYGADRVLYL 57
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 58 GPLSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 118 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 177
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 178 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
+ENLADHL DPVNNNAWAYATNFVPGK
Sbjct: 238 IENLADHLTDPVNNNAWAYATNFVPGK 264
>gi|388503040|gb|AFK39586.1| unknown [Medicago truncatula]
Length = 265
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/254 (88%), Positives = 238/254 (93%), Gaps = 2/254 (0%)
Query: 12 FVGKAVNLAPSGNELSNGGRISMRK-TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTG 70
FVGKA+ L+PS ++ G R++MRK T KSV SGSPWYGPDRVKYLGPFSGE PSYLTG
Sbjct: 13 FVGKAIKLSPSTQDIGVG-RVTMRKATTKKSVPSGSPWYGPDRVKYLGPFSGEAPSYLTG 71
Query: 71 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 130
EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWF
Sbjct: 72 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWF 131
Query: 131 KAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPG 190
KAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGP GEV DPLYPG
Sbjct: 132 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPPGEVVDPLYPG 191
Query: 191 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 250
GSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVN
Sbjct: 192 GSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 251
Query: 251 NNAWAYATNFVPGK 264
NNAWAYATNF PGK
Sbjct: 252 NNAWAYATNFAPGK 265
>gi|357159898|ref|XP_003578592.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357159901|ref|XP_003578593.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357159904|ref|XP_003578594.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 3 [Brachypodium distachyon]
gi|357159907|ref|XP_003578595.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 4 [Brachypodium distachyon]
gi|357159910|ref|XP_003578596.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 5 [Brachypodium distachyon]
Length = 265
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/270 (85%), Positives = 244/270 (90%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSS-SFVGKAVNLA---PSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRV 54
MA +TMALSS + G V ++ P G GRI+MRKT +K +SGSPWYG DRV
Sbjct: 1 MAAATMALSSPAMAGTPVKVSRATPFGE-----GRITMRKTAAKPKVSASGSPWYGSDRV 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP
Sbjct: 56 LYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
ELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR
Sbjct: 116 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGPLENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 236 KGPLENLADHLSDPVNNNAWAFATNFVPGK 265
>gi|21592428|gb|AAM64379.1| putative photosystem II type I chlorophyll a b binding protein
[Arabidopsis thaliana]
Length = 266
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/266 (85%), Positives = 243/266 (91%), Gaps = 2/266 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS + GKAV L+P+ +E+ GRI+MRK + SGSPWYG DRVKYLGP
Sbjct: 1 MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-G 178
NGV+FGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG G
Sbjct: 121 NGVEFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 180
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266
>gi|688315|gb|AAC78690.1| chlorophyll a/b-binding protein [Pinus thunbergii]
Length = 274
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/261 (86%), Positives = 237/261 (90%), Gaps = 10/261 (3%)
Query: 14 GKAVNLAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYLGPFSGE 63
G+ +L P N+L G R++MRK +K VS S SPWYGPDRV YLGPFSGE
Sbjct: 14 GQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKVSASASTSPWYGPDRVLYLGPFSGE 73
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK
Sbjct: 74 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 133
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 183
FGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAGGPLGEV
Sbjct: 134 FGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEV 193
Query: 184 TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 243
TDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL D
Sbjct: 194 TDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLTD 253
Query: 244 HLADPVNNNAWAYATNFVPGK 264
HLADPVNNNAWAYATNFVPGK
Sbjct: 254 HLADPVNNNAWAYATNFVPGK 274
>gi|218172|dbj|BAA00536.1| type I light-harvesting chlorophyll a/b-binding protein [Oryza
sativa Japonica Group]
gi|227611|prf||1707316A chlorophyll a/b binding protein 1
Length = 265
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/268 (86%), Positives = 242/268 (90%), Gaps = 7/268 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPS-GNELSNGGRISMRKTGSK---SVSSGSPWYGPDRVKY 56
MA +TMALSS + +A APS + L RI+MRKT +K + SSGSPWYG DRV Y
Sbjct: 1 MAAATMALSSPVMARA---APSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLY 57
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE+IH RWAMLGALGCVFPEL
Sbjct: 58 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELELIHSRWAMLGALGCVFPEL 117
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
LARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIA
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIA 177
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
GGPLGEV DPLYPGG+FDPLGLADDPEAFAELKVKEIK GRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKKGRLAMFSMFGFFVQAIVTGKG 237
Query: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264
PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|413948509|gb|AFW81158.1| light harvesting chlorophyll a/b binding protein3 [Zea mays]
Length = 302
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/264 (88%), Positives = 243/264 (92%), Gaps = 7/264 (2%)
Query: 5 TMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSV---SSGSPWYGPDRVKYLGPF 60
TMALSS+ F GKAVN+ S L R++MRKT +K+ SSGSPWYGPDRV YLGP
Sbjct: 42 TMALSSTAFAGKAVNVPSS---LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPL 98
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARN
Sbjct: 99 SGAPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 158
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL 180
GVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA+EGYR+AGGPL
Sbjct: 159 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPL 218
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
GEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 219 GEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 278
Query: 241 LADHLADPVNNNAWAYATNFVPGK 264
LADHLADPVNNNAWAYATNFVPGK
Sbjct: 279 LADHLADPVNNNAWAYATNFVPGK 302
>gi|115786|sp|P06671.1|CB22_MAIZE RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|22357|emb|CAA68451.1| LHCP [Zea mays]
Length = 265
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/268 (87%), Positives = 244/268 (91%), Gaps = 7/268 (2%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVS---SGSPWYGPDRVKY 56
MA+STMALSS+ F GKAVN+ S R++MRKT +K+ SGSPWYGPDRV Y
Sbjct: 1 MASSTMALSSTAFAGKAVNVPSSS---FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLY 57
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 58 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
LARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 177
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
GGPLGEV DPLYPGGSFDPLGLADDPEAF ELKVKE+K GRLAM SMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKG 237
Query: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264
PLENLADH+ADPVNNNAWAYATNFVPGK
Sbjct: 238 PLENLADHIADPVNNNAWAYATNFVPGK 265
>gi|17473828|gb|AAL38341.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|21387019|gb|AAM47913.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 267
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/267 (85%), Positives = 245/267 (91%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLG 58
MA STMALSS +F GKAVNL+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
RNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180
Query: 179 -PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
PLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 EPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267
>gi|15220615|ref|NP_174286.1| chlorophyll a-b binding protein 1 [Arabidopsis thaliana]
gi|115783|sp|P04778.1|CB1C_ARATH RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=Chlorophyll a-b protein 140;
Short=CAB-140; AltName: Full=LHCII type I CAB-1; Flags:
Precursor
gi|9972353|gb|AAG10603.1|AC008030_3 Putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|16226883|gb|AAL16289.1|AF428359_1 At1g29930/F1N18_23 [Arabidopsis thaliana]
gi|16376|emb|CAA27543.1| chlorophyll a/b binding protein (LHCP AB 140) [Arabidopsis
thaliana]
gi|15010744|gb|AAK74031.1| At1g29930/F1N18_23 [Arabidopsis thaliana]
gi|15293003|gb|AAK93612.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|16648807|gb|AAL25594.1| At1g29930/F1N18_23 [Arabidopsis thaliana]
gi|20258873|gb|AAM14108.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|332193030|gb|AEE31151.1| chlorophyll a-b binding protein 1 [Arabidopsis thaliana]
Length = 267
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/267 (85%), Positives = 245/267 (91%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLG 58
MA STMALSS +F GKAV L+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG- 177
RNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267
>gi|357159913|ref|XP_003578597.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 6 [Brachypodium distachyon]
Length = 264
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/268 (85%), Positives = 243/268 (90%), Gaps = 11/268 (4%)
Query: 3 TSTMALSS-SFVGKAVNLA---PSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKY 56
T+TMALSS + G V ++ P G GRI+MRKT +K +SGSPWYG DRV Y
Sbjct: 2 TATMALSSPAMAGTPVKVSRATPFGE-----GRITMRKTAAKPKVSASGSPWYGSDRVLY 56
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 57 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
LARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+A
Sbjct: 117 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 176
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
GGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 177 GGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
Query: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264
PLENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 237 PLENLADHLSDPVNNNAWAFATNFVPGK 264
>gi|115438250|ref|NP_001043493.1| Os01g0600900 [Oryza sativa Japonica Group]
gi|82654918|sp|P12331.2|CB22_ORYSJ RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic;
AltName: Full=LHCII type I CAB-2; Short=LHCP; Flags:
Precursor
gi|53793541|dbj|BAD52990.1| putative a/b-binding protein precursor [Oryza sativa Japonica
Group]
gi|113533024|dbj|BAF05407.1| Os01g0600900 [Oryza sativa Japonica Group]
gi|125526713|gb|EAY74827.1| hypothetical protein OsI_02717 [Oryza sativa Indica Group]
gi|125605334|gb|EAZ44370.1| hypothetical protein OsJ_28992 [Oryza sativa Japonica Group]
gi|215767332|dbj|BAG99560.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768322|dbj|BAH00551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|385718790|gb|AFI71822.1| chlorophyll a/b-binding protein [Oryza sativa]
Length = 261
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/267 (86%), Positives = 241/267 (90%), Gaps = 9/267 (3%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TMALSS + GKA ++ GRI+MRK+ +K +SGSPWYG DRV YL
Sbjct: 1 MAAATMALSSPALAGKAAA------KVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYL 54
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 55 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 114
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 115 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 174
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 175 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 234
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 235 LENLADHLADPVNNNAWAYATNFVPGK 261
>gi|115788|sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding protein AB80, chloroplastic;
AltName: Full=LHCII type I CAB-AB80; Short=LHCP; Flags:
Precursor
gi|169053|gb|AAA63413.1| cab precursor [Pisum sativum]
gi|169055|gb|AAA33651.1| polypeptide 15 precursor [Pisum sativum]
gi|223990|prf||1006296A protein,chlorophyll a/b binding
Length = 269
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/256 (87%), Positives = 234/256 (91%), Gaps = 3/256 (1%)
Query: 11 SFVGKAVNLAPSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYL 68
+ GK + L PS EL R +MRK T K SSGSPWYGPDRVKYLGPFSGE PSYL
Sbjct: 15 TLAGKQLKLNPSSQEL-GAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYL 73
Query: 69 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 128
TGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAV
Sbjct: 74 TGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAV 133
Query: 129 WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLY 188
WFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLY
Sbjct: 134 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLY 193
Query: 189 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
PGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP
Sbjct: 194 PGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 253
Query: 249 VNNNAWAYATNFVPGK 264
VNNNAW+YATNFVPGK
Sbjct: 254 VNNNAWSYATNFVPGK 269
>gi|162461878|ref|NP_001105427.1| light harvesting chlorophyll a /b binding protein [Zea mays]
gi|22230|emb|CAA37474.1| light harvesting chlorophyll a /b binding protein [Zea mays]
Length = 265
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/268 (87%), Positives = 246/268 (91%), Gaps = 7/268 (2%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVS---SGSPWYGPDRVKY 56
MA+STMALSS+ F GKAVN+ PS + R++MRKT +K+ SGSPWYGPDRV Y
Sbjct: 1 MASSTMALSSTAFAGKAVNV-PSSSAFE--ARVTMRKTAAKAKPAAASGSPWYGPDRVLY 57
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 58 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 117
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
LARNGVKFGEAV FKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA
Sbjct: 118 LARNGVKFGEAVGFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 177
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
GGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+K GRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKKGRLAMFSMFGFFVQAIVTGKG 237
Query: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264
PLENLADH+ADPVNNNAWAYATNFVPGK
Sbjct: 238 PLENLADHIADPVNNNAWAYATNFVPGK 265
>gi|116778744|gb|ABK20976.1| unknown [Picea sitchensis]
gi|116779697|gb|ABK21395.1| unknown [Picea sitchensis]
gi|116790882|gb|ABK25775.1| unknown [Picea sitchensis]
gi|148908056|gb|ABR17147.1| unknown [Picea sitchensis]
gi|148908517|gb|ABR17370.1| unknown [Picea sitchensis]
gi|224284311|gb|ACN39891.1| unknown [Picea sitchensis]
gi|224284945|gb|ACN40202.1| unknown [Picea sitchensis]
gi|224285575|gb|ACN40506.1| unknown [Picea sitchensis]
gi|224285579|gb|ACN40508.1| unknown [Picea sitchensis]
Length = 274
Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/261 (85%), Positives = 238/261 (91%), Gaps = 10/261 (3%)
Query: 14 GKAVNLAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYLGPFSGE 63
G+ +L P N+L G R++MRK+ +K VS S SPWYGPDRV YLGPFSGE
Sbjct: 14 GQISSLKPHNNQLVGVGAGVHGEARVTMRKSSTKKVSASASTSPWYGPDRVLYLGPFSGE 73
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVK
Sbjct: 74 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVK 133
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 183
FGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAGGPLGE+
Sbjct: 134 FGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEI 193
Query: 184 TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 243
TDP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLAD
Sbjct: 194 TDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLAD 253
Query: 244 HLADPVNNNAWAYATNFVPGK 264
HLADPVNNNAWAYATNFVPGK
Sbjct: 254 HLADPVNNNAWAYATNFVPGK 274
>gi|115820|sp|P15194.1|CB2B_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 1B,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type II 1B; Short=CAB; AltName: Full=LHCP;
Flags: Precursor
gi|20665|emb|CAA32658.1| unnamed protein product [Pinus sylvestris]
Length = 274
Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/267 (84%), Positives = 240/267 (89%), Gaps = 11/267 (4%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYL 57
S +F G ++ L P N+L G R++MRK +K ++ S SPWYGPDRV YL
Sbjct: 8 SCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYL 67
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 68 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELL 127
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 128 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 187
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDP+YPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 188 GPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 247
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 248 IENLADHLADPVNNNAWAYATNFVPGK 274
>gi|115782|sp|P04784.1|CB21_WHEAT RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|170674|gb|AAA34260.1| chlorophyll a/b-binding protein precursor [Triticum aestivum]
Length = 266
Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/267 (85%), Positives = 243/267 (91%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TM+LSSS F GKAV PS + L R++MRKT +K+ VSS SPWYG DRV YL
Sbjct: 1 MAATTMSLSSSSFAGKAVKNLPS-SALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 60 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEA WFKAG+QIFS+GGLDYLGNPSL+HAQS+LAIWACQVVLMGAVEGYRIAG
Sbjct: 120 ARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+ DPLYPGGSFDPLGLA+ P+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LE+LADH+ADPVNNNAW ATNFVPGK
Sbjct: 240 LEDLADHIADPVNNNAWLIATNFVPGK 266
>gi|297823231|ref|XP_002879498.1| LHB1B1 [Arabidopsis lyrata subsp. lyrata]
gi|297325337|gb|EFH55757.1| LHB1B1 [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/266 (84%), Positives = 242/266 (90%), Gaps = 2/266 (0%)
Query: 1 MATSTMAL-SSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA +TMAL S + GKAV L+P+ +E+ GR++MRK + SGSPWYG DRVKYLGP
Sbjct: 1 MAATTMALYSPALAGKAVKLSPAASEVFGTGRVTMRKASKPTGPSGSPWYGSDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-G 178
NGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNG 180
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
ENL+DHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 ENLSDHLADPVNNNAWAFATNFVPGK 266
>gi|262410738|gb|ACY66805.1| chlorophyll a/b-binding protein [Pinus massoniana]
Length = 274
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/267 (84%), Positives = 239/267 (89%), Gaps = 11/267 (4%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYL 57
S +F G ++ L P N+L G R++MRK +K VS S SPWYGPDRV YL
Sbjct: 8 SCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKVSASASTSPWYGPDRVLYL 67
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 68 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 127
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 128 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 187
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRL MFSMFGFFVQAIVTGKGP
Sbjct: 188 GPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLTMFSMFGFFVQAIVTGKGP 247
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
+E+LADHLADPVNNNAWAY TNFVPGK
Sbjct: 248 IEDLADHLADPVNNNAWAYGTNFVPGK 274
>gi|326520097|dbj|BAK03973.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/269 (85%), Positives = 240/269 (89%), Gaps = 11/269 (4%)
Query: 2 ATSTMALSSSFVG----KAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVK 55
A +TMALSS + KA AP G GRI+MRKT K +S SPWYG DRV
Sbjct: 3 AAATMALSSPAMAGTPVKASRAAPFGE-----GRITMRKTAGKPKVAASSSPWYGSDRVL 57
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGP SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE
Sbjct: 58 YLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+
Sbjct: 118 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 177
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLGE+ DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 178 AGGPLGEIVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 237
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 238 GPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|115439621|ref|NP_001044090.1| Os01g0720500 [Oryza sativa Japonica Group]
gi|18461220|dbj|BAB84417.1| putative chlorophyll a/b-binding protein 3C precursor [Oryza sativa
Japonica Group]
gi|113533621|dbj|BAF06004.1| Os01g0720500 [Oryza sativa Japonica Group]
gi|125527527|gb|EAY75641.1| hypothetical protein OsI_03546 [Oryza sativa Indica Group]
gi|125571846|gb|EAZ13361.1| hypothetical protein OsJ_03282 [Oryza sativa Japonica Group]
gi|215678907|dbj|BAG96337.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679047|dbj|BAG96477.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764952|dbj|BAG86649.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/269 (86%), Positives = 242/269 (89%), Gaps = 9/269 (3%)
Query: 1 MATSTMALSS--SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSS---GSPWYGPDRVK 55
MA STMALSS + GKAV A E GR++MRK+ +K + GSPWYG DRV
Sbjct: 1 MAASTMALSSPAALAGKAVANAKVFGE----GRVTMRKSAAKPKPAAASGSPWYGADRVL 56
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE
Sbjct: 57 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 116
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIW CQVVLMGAVEGYR+
Sbjct: 117 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWGCQVVLMGAVEGYRV 176
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 177 AGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 236
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 237 GPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|14041685|emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/267 (85%), Positives = 240/267 (89%), Gaps = 11/267 (4%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYL 57
S +F G ++ L P N+L G R++MRK +K VS S SPWYGPDRV YL
Sbjct: 8 SCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKAATKKVSVSASTSPWYGPDRVLYL 67
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 68 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 127
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 128 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 187
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 188 GPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 247
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
+ENLADHLADPV+NNAWAYATNFVPGK
Sbjct: 248 IENLADHLADPVSNNAWAYATNFVPGK 274
>gi|4512125|gb|AAD21625.1| putative chlorophyll a/b-binding protein [Phalaenopsis hybrid
cultivar]
Length = 277
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/266 (84%), Positives = 237/266 (89%), Gaps = 10/266 (3%)
Query: 9 SSSFVGKAVNLAPSGNELSNGGRISMRK----------TGSKSVSSGSPWYGPDRVKYLG 58
S SF GKAV ++PS + GRI+M+ G ++ SPWYGPDRVKYLG
Sbjct: 12 SPSFAGKAVKISPSNVLIFGEGRITMQDKTTSNRPRTTAGKLRPATSSPWYGPDRVKYLG 71
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+FPELLA
Sbjct: 72 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLA 131
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
RNGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMGAVEGYRIAGG
Sbjct: 132 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGAVEGYRIAGG 191
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGE+TDPLYPG SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 192 PLGEITDPLYPGNSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 251
Query: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 252 ENLADHLADPVNNNAWAYATNFVPGK 277
>gi|31323256|gb|AAP44089.1| chlorophyll a/b binding protein [Brassica oleracea]
Length = 273
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/267 (85%), Positives = 243/267 (91%), Gaps = 3/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLG 58
MA STMALSS +F GKAV L+P+ +E+ GR++MRKT +K SGSPWYG +RVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSERVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGEPPSYLTG+FPGDYGWDTAGLSA PETF +NRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61 PFSGEPPSYLTGQFPGDYGWDTAGLSAVPETFVRNRELEVIHCRWAMLGALGCVFPELLA 120
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG- 177
RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+ G
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVPGD 180
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE D LYPGGSFDPLGLA DP AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPVAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267
>gi|224284929|gb|ACN40194.1| unknown [Picea sitchensis]
Length = 274
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/267 (84%), Positives = 241/267 (90%), Gaps = 11/267 (4%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYL 57
S +F G ++ L P N+L G R++MRK+ +K VS S SPWYGPDRV YL
Sbjct: 8 SCAFAGGQISSLKPHNNQLVGVGAGVHGEARVTMRKSSTKKVSASASTSPWYGPDRVLYL 67
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPS+LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 68 GPFSGEPPSHLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 127
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 128 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 187
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+TDP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 188 GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 247
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 248 IENLADHLADPVNNNAWAYATNFVPGK 274
>gi|467794|emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/261 (86%), Positives = 237/261 (90%), Gaps = 10/261 (3%)
Query: 14 GKAVNLAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYLGPFSGE 63
G+ +L P N+L G R++MRK +K VS S SPWYGPDRV YLGPFSGE
Sbjct: 14 GQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKVSVSASTSPWYGPDRVLYLGPFSGE 73
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVK
Sbjct: 74 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVK 133
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 183
FGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAGGPLGEV
Sbjct: 134 FGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEV 193
Query: 184 TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 243
TDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLAD
Sbjct: 194 TDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLAD 253
Query: 244 HLADPVNNNAWAYATNFVPGK 264
HLADPV+NNAWAYATNFVPGK
Sbjct: 254 HLADPVSNNAWAYATNFVPGK 274
>gi|414881722|tpg|DAA58853.1| TPA: hypothetical protein ZEAMMB73_924562 [Zea mays]
Length = 259
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/262 (86%), Positives = 239/262 (91%), Gaps = 6/262 (2%)
Query: 6 MALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSG 62
MA++S + VGK A ++ GRI+MRKT +K +SGSPWYG DRV YLGP SG
Sbjct: 1 MAITSRALVGKP---AAGTRDVFGEGRITMRKTAAKPKPAASGSPWYGADRVLYLGPLSG 57
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV
Sbjct: 58 SPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 117
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 182
KFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGE
Sbjct: 118 KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGE 177
Query: 183 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 242
V DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA
Sbjct: 178 VVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 237
Query: 243 DHLADPVNNNAWAYATNFVPGK 264
DH+ADPVNNNAWAYATNFVPGK
Sbjct: 238 DHIADPVNNNAWAYATNFVPGK 259
>gi|413968456|gb|AFW90565.1| chlorophyll a-b binding protein 3C-like mRNA [Solanum tuberosum]
Length = 233
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/233 (95%), Positives = 227/233 (97%), Gaps = 2/233 (0%)
Query: 34 MRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 91
MRKT +K+ SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 1 MRKTAAKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFA 60
Query: 92 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLI 151
KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+
Sbjct: 61 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 120
Query: 152 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVK 211
HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVK
Sbjct: 121 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 180
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 181 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 233
>gi|326510047|dbj|BAJ87240.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/255 (87%), Positives = 234/255 (91%), Gaps = 3/255 (1%)
Query: 12 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLT 69
F GKAV P + L R++MRKT +K+ VSS SPWYG DRV YLGP SGEPPSYLT
Sbjct: 13 FAGKAVKNVPL-STLFGEARVTMRKTTAKAKQVSSSSPWYGADRVLYLGPLSGEPPSYLT 71
Query: 70 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 129
GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG +FPELLARNGVKFGEAVW
Sbjct: 72 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGSIFPELLARNGVKFGEAVW 131
Query: 130 FKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYP 189
FKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGE+ DPLYP
Sbjct: 132 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYP 191
Query: 190 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 249
GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH+ DPV
Sbjct: 192 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIVDPV 251
Query: 250 NNNAWAYATNFVPGK 264
NNNAWA+ATNFVPGK
Sbjct: 252 NNNAWAFATNFVPGK 266
>gi|607150|emb|CAA57408.1| light harvesting chlorophyll a /b-binding protein Lhcb1*2-1 [Picea
abies]
Length = 274
Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/267 (84%), Positives = 240/267 (89%), Gaps = 11/267 (4%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYL 57
S +F G ++ L P N+L G R++MRK+ +K VS S SPWYGPDRV YL
Sbjct: 8 SCAFAGGQISSLKPHNNQLLGVGAGVHGEARVTMRKSSTKKVSASASPSPWYGPDRVLYL 67
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 68 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 127
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 128 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAG 187
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+TDP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 188 GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 247
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
+ENLADHLADPV NNAWAYATNFVPGK
Sbjct: 248 IENLADHLADPVTNNAWAYATNFVPGK 274
>gi|20178|emb|CAA32108.1| chlorophyll a/b-binding preprotein (AA -31 to 235) [Oryza sativa]
Length = 266
Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/269 (86%), Positives = 242/269 (89%), Gaps = 8/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPS-GNELSNGGRISMRKTGSK---SVSSGSPWYGPDRVKY 56
MA +TMALSS + +A APS + L RI+MRKT +K + SSGSPWYG DRV Y
Sbjct: 1 MAAATMALSSPVMARA---APSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLY 57
Query: 57 LGPFSG-EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
LGP SG EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 58 LGPLSGREPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 117
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRI
Sbjct: 118 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRI 177
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLGEV DPLYPGG+FDPLGLADDPEA AELKVK+IKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 178 AGGPLGEVVDPLYPGGAFDPLGLADDPEACAELKVKKIKNGRLAMFSMFGFFVQAIVTGK 237
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 238 GPLENLADHLADPVNNNAWAYATNFVPGK 266
>gi|18403546|ref|NP_565786.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
gi|13926260|gb|AAK49602.1|AF372886_1 At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|16226426|gb|AAL16165.1|AF428397_1 At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|16930391|gb|AAL31882.1|AF419548_1 At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|16930467|gb|AAL31919.1|AF419587_1 At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|16364|emb|CAA45790.1| photosystem II type I chlorophyll a /b binding protein [Arabidopsis
thaliana]
gi|3128230|gb|AAC26710.1| photosystem II type I chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|14517452|gb|AAK62616.1| At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|15027899|gb|AAK76480.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|17473689|gb|AAL38301.1| photosystem II type I chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|19310503|gb|AAL84985.1| At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|19310521|gb|AAL84994.1| At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|20148517|gb|AAM10149.1| photosystem II type I chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|20197168|gb|AAM14954.1| photosystem II type I chlorophyll a b binding protein [Arabidopsis
thaliana]
gi|23296426|gb|AAN13114.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|110739111|dbj|BAF01472.1| photosystem II type I chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|330253878|gb|AEC08972.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
Length = 265
Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/267 (85%), Positives = 245/267 (91%), Gaps = 5/267 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLG 58
MA+STMALSS +F GKAV P+ +++ GR++MRKT +K SGSPWYG DRVKYLG
Sbjct: 1 MASSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 58
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA
Sbjct: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 118
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG- 177
RNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG
Sbjct: 119 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 178
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 179 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 239 LENLADHLADPVNNNAWAFATNFVPGK 265
>gi|297851414|ref|XP_002893588.1| hypothetical protein ARALYDRAFT_473203 [Arabidopsis lyrata subsp.
lyrata]
gi|297339430|gb|EFH69847.1| hypothetical protein ARALYDRAFT_473203 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/262 (85%), Positives = 242/262 (92%), Gaps = 3/262 (1%)
Query: 6 MALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFSGE 63
MALSS +F GKAVNL+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLGPFSGE
Sbjct: 1 MALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGE 60
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVK
Sbjct: 61 PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVK 120
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGE 182
FGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG GPLGE
Sbjct: 121 FGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGE 180
Query: 183 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 242
D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLA
Sbjct: 181 AEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 240
Query: 243 DHLADPVNNNAWAYATNFVPGK 264
DHLADPV NNAWA+ATNFVPGK
Sbjct: 241 DHLADPVTNNAWAFATNFVPGK 262
>gi|20182|emb|CAA32109.1| chlorophyll a/b-binding preprotein (AA -28 to 235) [Oryza sativa]
Length = 263
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/269 (85%), Positives = 241/269 (89%), Gaps = 11/269 (4%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK---SVSSGSPWYGPDRVKY 56
MA +TMALSS + GKA ++ GRI+MRK+ +K + SSGSPWYG DRV Y
Sbjct: 1 MAAATMALSSPALAGKAAA------KVFGEGRITMRKSAAKPKPAASSGSPWYGADRVLY 54
Query: 57 LGPFSG-EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
LGP SG EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG LGCVFPE
Sbjct: 55 LGPLSGREPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGGLGCVFPE 114
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRI
Sbjct: 115 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRI 174
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLGEV DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 175 AGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 234
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 235 GPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|116782449|gb|ABK22510.1| unknown [Picea sitchensis]
gi|116782855|gb|ABK22691.1| unknown [Picea sitchensis]
gi|116791804|gb|ABK26115.1| unknown [Picea sitchensis]
gi|148908337|gb|ABR17282.1| unknown [Picea sitchensis]
Length = 278
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/274 (82%), Positives = 245/274 (89%), Gaps = 10/274 (3%)
Query: 1 MATSTMALSSSFVGKAVN-LAPSGNELSNGG------RISMRK-TGSKSV--SSGSPWYG 50
MA+ + +F G ++ + P N+L G R++MRK TG KSV SS SPWYG
Sbjct: 5 MASCGIGSRCAFTGGQLSSVKPQNNQLLGVGGGHGEARLTMRKATGKKSVAASSDSPWYG 64
Query: 51 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
PDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG
Sbjct: 65 PDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 124
Query: 111 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 170
CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P+L+HAQSILAIWACQV+LMGA+
Sbjct: 125 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPNLVHAQSILAIWACQVILMGAI 184
Query: 171 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
EGYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQA
Sbjct: 185 EGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQA 244
Query: 231 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 245 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|115817|sp|P15193.1|CB2A_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 1A,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type II 1A; Short=CAB; AltName: Full=LHCP;
Flags: Precursor
gi|20661|emb|CAA32657.1| unnamed protein product [Pinus sylvestris]
Length = 278
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/274 (82%), Positives = 244/274 (89%), Gaps = 10/274 (3%)
Query: 1 MATSTMALSSSFVGKAVN-LAPSGNELSNGG------RISMRK-TGSKSVSSG--SPWYG 50
MA+ + +F G ++ + P N+L G R++MRK TG KSV++ SPWYG
Sbjct: 5 MASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYG 64
Query: 51 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
PDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG
Sbjct: 65 PDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 124
Query: 111 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 170
CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHAQSILAIWACQV+LMGA+
Sbjct: 125 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAI 184
Query: 171 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
EGYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQA
Sbjct: 185 EGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQA 244
Query: 231 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
IVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 245 IVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
>gi|357148841|ref|XP_003574911.1| PREDICTED: uncharacterized protein LOC100846020 [Brachypodium
distachyon]
Length = 560
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/265 (85%), Positives = 242/265 (91%), Gaps = 6/265 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGS-PWYGPDRVKYLGP 59
MA +TM LS+ A+ LA + L GGRI+MRK+ +K+ SS PWYG DRV YLGP
Sbjct: 1 MAATTMTLSTP----AMKLARAATVL-GGGRITMRKSVAKASSSSGSPWYGSDRVLYLGP 55
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 56 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 115
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGP
Sbjct: 116 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP 175
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGE+ DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 176 LGEIVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 235
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 236 NLADHLADPVNNNAWAFATNFVPGK 260
>gi|359754911|gb|AEV59645.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis lambertii]
Length = 237
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/236 (93%), Positives = 226/236 (95%), Gaps = 2/236 (0%)
Query: 31 RISMRK--TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 88
+ +MRK T K SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 2 KFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 61
Query: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 148
TFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP
Sbjct: 62 TFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 121
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAEL
Sbjct: 122 SLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEL 181
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 182 KVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 237
>gi|297845914|ref|XP_002890838.1| hypothetical protein ARALYDRAFT_473204 [Arabidopsis lyrata subsp.
lyrata]
gi|297336680|gb|EFH67097.1| hypothetical protein ARALYDRAFT_473204 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/262 (85%), Positives = 241/262 (91%), Gaps = 3/262 (1%)
Query: 6 MALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFSGE 63
MALSS +F GKAV L+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLGPFSGE
Sbjct: 1 MALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTTAKPKGPSGSPWYGSDRVKYLGPFSGE 60
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVK
Sbjct: 61 PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVK 120
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGE 182
FGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG GPLGE
Sbjct: 121 FGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGE 180
Query: 183 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 242
D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLA
Sbjct: 181 AEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 240
Query: 243 DHLADPVNNNAWAYATNFVPGK 264
DHLADPV NNAWA+ATNFVPGK
Sbjct: 241 DHLADPVTNNAWAFATNFVPGK 262
>gi|359754901|gb|AEV59640.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis campestris subsp. johannensis]
gi|359754909|gb|AEV59644.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis splendens]
Length = 239
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/236 (93%), Positives = 226/236 (95%), Gaps = 2/236 (0%)
Query: 31 RISMRK--TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 88
+ +MRK T K SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 4 KFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 63
Query: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 148
TFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP
Sbjct: 64 TFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 123
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAEL
Sbjct: 124 SLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEL 183
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 184 KVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 239
>gi|974850|emb|CAA61432.1| LHCII type I protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/267 (83%), Positives = 239/267 (89%), Gaps = 4/267 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TM LSSS F GKAV P + L R++MRKT +K+ VSS SPWYG DRV YL
Sbjct: 1 MAATTMYLSSSTFAGKAVKNVPL-SALFGEARVTMRKTAAKAKQVSSSSPWYGADRVLYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP S EPPSYLTG+FPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 60 GPLSREPPSYLTGDFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+ DPLYPGG FDPLGLA+ P+AF LKVKEIKNGRLAMFSMFGF VQAIVTGKGP
Sbjct: 180 GPLGEIVDPLYPGGRFDPLGLAERPQAFDALKVKEIKNGRLAMFSMFGFLVQAIVTGKGP 239
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
LENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 240 LENLADHIADPVNNNAWAFATNFVPGK 266
>gi|359754899|gb|AEV59639.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis arctobia]
Length = 239
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/236 (93%), Positives = 226/236 (95%), Gaps = 2/236 (0%)
Query: 31 RISMRK--TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 88
+ +MRK T K SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 4 KFTMRKAATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 63
Query: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 148
TFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP
Sbjct: 64 TFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 123
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAEL
Sbjct: 124 SLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEL 183
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 184 KVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 239
>gi|607152|emb|CAA57409.1| light harvesting chlorophyll a /b-binding protein Lhcb1*2-2 [Picea
abies]
Length = 275
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/268 (84%), Positives = 240/268 (89%), Gaps = 12/268 (4%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTGS-KSVS---SGSPWYGPDRVKY 56
S +F G ++ L P N+L G R++MRK+ + K VS S SPWYGPDRV Y
Sbjct: 8 SCAFAGGQISSLKPHNNQLLGVGAGVHGEARVTMRKSSTTKKVSASASPSPWYGPDRVLY 67
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 68 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 127
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIA
Sbjct: 128 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIA 187
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
GGPLGE+TDP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 188 GGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 247
Query: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264
P+ENLADHLADPV NNAWAYATNFVPGK
Sbjct: 248 PIENLADHLADPVTNNAWAYATNFVPGK 275
>gi|115791|sp|P09755.1|CB22_SOYBN RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic;
AltName: Full=LHCII type I CAB-2; Short=LHCP; Flags:
Precursor
gi|18548|emb|CAA31418.1| chlorophyll a/b binding preprotein (AA -33 to 223) [Glycine max]
Length = 256
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/265 (86%), Positives = 237/265 (89%), Gaps = 10/265 (3%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSSS G+A+ LAPS EL G R+SMRKT K+VSSGSPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSSSLAGQAMKLAPSTPELGVG-RVSMRKTAPKTVSSGSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEF GLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 60 FSGEAPSYLTGEF--------HGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 111
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGP
Sbjct: 112 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGP 171
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDPEA AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 172 LGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 231
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NLADHLADPVNNNAWAYAT PGK
Sbjct: 232 NLADHLADPVNNNAWAYATKLCPGK 256
>gi|115818|sp|P24006.1|CB2A_PYRPY RecName: Full=Chlorophyll a-b binding protein 1A, chloroplastic;
AltName: Full=LHCII type II CAB-1A; Short=LHCP; Flags:
Precursor
gi|218019|dbj|BAA00449.1| light harvesting a/b binding protein [Pyrus pyrifolia var. culta]
Length = 278
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/274 (81%), Positives = 244/274 (89%), Gaps = 10/274 (3%)
Query: 1 MATSTMALSSSFVGKAVN-LAPSGNELSNGG------RISMRK-TGSKSVSSG--SPWYG 50
MA+ + +F G ++ + P N+L G R++MRK TG KSV++ SPWYG
Sbjct: 5 MASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYG 64
Query: 51 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
PDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG
Sbjct: 65 PDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 124
Query: 111 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 170
CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHAQSILAIWACQV+LMGA+
Sbjct: 125 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAI 184
Query: 171 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
EGYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+AFA++KVKEIKNGRLAMFSMFGFFVQA
Sbjct: 185 EGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQA 244
Query: 231 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
IVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 245 IVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
>gi|359754907|gb|AEV59643.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis splendens]
Length = 236
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/235 (93%), Positives = 225/235 (95%), Gaps = 2/235 (0%)
Query: 31 RISMRK--TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 88
+ +MRK T K SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 2 KFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 61
Query: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 148
TFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP
Sbjct: 62 TFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 121
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAEL
Sbjct: 122 SLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEL 181
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
KVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPG
Sbjct: 182 KVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 236
>gi|224284623|gb|ACN40044.1| unknown [Picea sitchensis]
Length = 278
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/274 (82%), Positives = 244/274 (89%), Gaps = 10/274 (3%)
Query: 1 MATSTMALSSSFVG-KAVNLAPSGNELSNGG------RISMRK-TGSKSV--SSGSPWYG 50
MA+ + +F G + ++ P N+L G R++MRK TG KSV SS SPWYG
Sbjct: 5 MASCGIGSRCAFTGGQLSSVKPQNNQLLGVGGGHGEARLTMRKATGKKSVAASSDSPWYG 64
Query: 51 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
PDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG
Sbjct: 65 PDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 124
Query: 111 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 170
CVFPELLARNGVKFGEAVWFKAGAQIFSEG LDYLG+P+L+HAQSILAIWACQV+LMGA+
Sbjct: 125 CVFPELLARNGVKFGEAVWFKAGAQIFSEGWLDYLGSPNLVHAQSILAIWACQVILMGAI 184
Query: 171 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
EGYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQA
Sbjct: 185 EGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQA 244
Query: 231 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 245 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|302767620|ref|XP_002967230.1| light-harvesting complex [Selaginella moellendorffii]
gi|300165221|gb|EFJ31829.1| light-harvesting complex [Selaginella moellendorffii]
Length = 263
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/264 (84%), Positives = 238/264 (90%), Gaps = 8/264 (3%)
Query: 6 MALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTG-SKSVSSGSPWYGPDRVKYLGP 59
MA S+F G+ L P NE SNG R++MRKTG + SV GSPWYGPDRVKYLGP
Sbjct: 1 MAAPSTFAGQ-TGLKPQ-NEFVARNASNGSRVAMRKTGRASSVGGGSPWYGPDRVKYLGP 58
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL++
Sbjct: 59 FSGESPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSK 118
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NG+KFGEAVWFKAG+QIF EGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGP
Sbjct: 119 NGIKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRIAGGP 178
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 179 LGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 238
Query: 240 NLADHLADPVNNNAWAYATNFVPG 263
NL+DHLADPV NNAWAYATNF PG
Sbjct: 239 NLSDHLADPVANNAWAYATNFTPG 262
>gi|47168888|pdb|1RWT|A Chain A, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168889|pdb|1RWT|B Chain B, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168890|pdb|1RWT|C Chain C, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168891|pdb|1RWT|D Chain D, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168892|pdb|1RWT|E Chain E, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168893|pdb|1RWT|F Chain F, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168894|pdb|1RWT|G Chain G, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168895|pdb|1RWT|H Chain H, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168896|pdb|1RWT|I Chain I, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168897|pdb|1RWT|J Chain J, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
Length = 232
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/232 (93%), Positives = 223/232 (96%), Gaps = 2/232 (0%)
Query: 35 RKTGSK--SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
RKT K +V S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAK
Sbjct: 1 RKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAK 60
Query: 93 NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIH 152
NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+H
Sbjct: 61 NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVH 120
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
AQSILAIWACQV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE
Sbjct: 121 AQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE 180
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW +ATNFVPGK
Sbjct: 181 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 232
>gi|359754905|gb|AEV59642.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis maydelliana]
Length = 238
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/235 (92%), Positives = 224/235 (95%), Gaps = 2/235 (0%)
Query: 31 RISMRK--TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 88
+ +MRK T K SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 4 KFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 63
Query: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 148
TFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP
Sbjct: 64 TFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 123
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAE
Sbjct: 124 SLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEX 183
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
KVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPG
Sbjct: 184 KVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 238
>gi|223974123|gb|ACN31249.1| unknown [Zea mays]
Length = 233
Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/233 (93%), Positives = 224/233 (96%), Gaps = 2/233 (0%)
Query: 34 MRKT--GSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 91
MRKT K +SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 1 MRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 60
Query: 92 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLI 151
KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLI
Sbjct: 61 KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLI 120
Query: 152 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVK 211
HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVK
Sbjct: 121 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 180
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
E+KNGRLAMFSMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWAYATNFVPG
Sbjct: 181 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGN 233
>gi|302754140|ref|XP_002960494.1| light-harvesting complex [Selaginella moellendorffii]
gi|300171433|gb|EFJ38033.1| light-harvesting complex [Selaginella moellendorffii]
Length = 272
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/238 (89%), Positives = 227/238 (95%), Gaps = 1/238 (0%)
Query: 27 SNGGRISMRKTG-SKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSA 85
SNG RI+MRKTG + SV GSPWYGPDRVKYLGPFSGE PSYLTGE+PGDYGWDTAGLSA
Sbjct: 34 SNGSRIAMRKTGKASSVGGGSPWYGPDRVKYLGPFSGESPSYLTGEYPGDYGWDTAGLSA 93
Query: 86 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYL 145
DPETFAKNRELEVIH RWAMLGALGCVFPELL++NG+KFGEAVWFKAG+QIF EGGLDYL
Sbjct: 94 DPETFAKNRELEVIHSRWAMLGALGCVFPELLSKNGIKFGEAVWFKAGSQIFKEGGLDYL 153
Query: 146 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAF 205
GNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLA+DPEAF
Sbjct: 154 GNPSLVHAQSILAIWASQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAF 213
Query: 206 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENL+DHLADPV NNAWAYATNF PG
Sbjct: 214 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLSDHLADPVANNAWAYATNFTPG 271
>gi|1661160|gb|AAB18404.1| chlorophyll a/b binding protein [Oryza sativa Indica Group]
Length = 265
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/269 (84%), Positives = 237/269 (88%), Gaps = 9/269 (3%)
Query: 1 MATSTMALSS--SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSS---GSPWYGPDRVK 55
MA STMALSS + GKAV A E GR++MRK+ +K + GSPWYG DRV
Sbjct: 1 MAASTMALSSPAALAGKAVANAKVFGE----GRVTMRKSAAKPKPAAASGSPWYGADRVL 56
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGP SGEPPSYLTGEF GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE
Sbjct: 57 YLGPLSGEPPSYLTGEFSGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 116
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIW CQVV MGAVEGYR+
Sbjct: 117 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWGCQVVFMGAVEGYRV 176
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLGEV DPLYPGGS DPLGLADDPEAFAELKVKEIKNGRLAM SMFGFFVQAIVTGK
Sbjct: 177 AGGPLGEVVDPLYPGGSLDPLGLADDPEAFAELKVKEIKNGRLAMLSMFGFFVQAIVTGK 236
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GPLEN+ DHLADPVNNNAWAYATNFVPGK
Sbjct: 237 GPLENITDHLADPVNNNAWAYATNFVPGK 265
>gi|607148|emb|CAA57407.1| light harvesting chlorophyll a /b-binding protein Lhcb1*1 [Picea
abies]
Length = 278
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/274 (82%), Positives = 243/274 (88%), Gaps = 10/274 (3%)
Query: 1 MATSTMALSSSFVGKAVN-LAPSGNELSNGG------RISMRK-TGSKSV--SSGSPWYG 50
MA+ + +F G ++ + P N+L G R++MRK TG KSV SS SPWYG
Sbjct: 5 MASCGIGSRCAFTGGQLSSVKPQNNQLLGVGGGHGEARLTMRKATGKKSVAASSDSPWYG 64
Query: 51 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
PDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG
Sbjct: 65 PDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALG 124
Query: 111 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 170
CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P+LIHAQSILAI ACQV+LMGA+
Sbjct: 125 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPNLIHAQSILAILACQVILMGAI 184
Query: 171 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
EGYR+AGGPLGEVTDP+YPGG+FDPLG ADDP+AFAELKVKE+KNGRLAMFSMFGFFVQA
Sbjct: 185 EGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKNGRLAMFSMFGFFVQA 244
Query: 231 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 245 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|357118770|ref|XP_003561122.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 4 [Brachypodium distachyon]
Length = 233
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/233 (92%), Positives = 225/233 (96%), Gaps = 2/233 (0%)
Query: 34 MRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 91
MRKT +K+ VSSGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 1 MRKTAAKAKPVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 60
Query: 92 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLI 151
KNRELE+IH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+
Sbjct: 61 KNRELELIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 120
Query: 152 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVK 211
HAQSILAIWACQVVLMGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVK
Sbjct: 121 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 180
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
E+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 181 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 233
>gi|116785761|gb|ABK23849.1| unknown [Picea sitchensis]
Length = 278
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/274 (81%), Positives = 243/274 (88%), Gaps = 10/274 (3%)
Query: 1 MATSTMALSSSFVGKAVN-LAPSGNELSNGG------RISMRK-TGSKSV--SSGSPWYG 50
MA+ + +F G ++ + P N+L G R++MRK TG KSV SS SPWYG
Sbjct: 5 MASCGIGSRCAFTGGQLSSVKPQNNQLLGVGGGHGEARLTMRKATGKKSVAASSDSPWYG 64
Query: 51 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
PDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG
Sbjct: 65 PDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALG 124
Query: 111 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 170
CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P+L+HAQSILAI ACQV+LMGA+
Sbjct: 125 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPNLVHAQSILAILACQVILMGAI 184
Query: 171 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
EGYR+AGGPLGEVTDP+YPGG+FDPLG ADDP+AFAELKVKE+KNGRLAMFSMFGFFVQA
Sbjct: 185 EGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKNGRLAMFSMFGFFVQA 244
Query: 231 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 245 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|116791684|gb|ABK26071.1| unknown [Picea sitchensis]
gi|148908641|gb|ABR17429.1| unknown [Picea sitchensis]
Length = 278
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/274 (81%), Positives = 243/274 (88%), Gaps = 10/274 (3%)
Query: 1 MATSTMALSSSFVGKAVN-LAPSGNELSNGG------RISMRK-TGSKSV--SSGSPWYG 50
MA+ + +F G ++ + P N+L G R++MRK TG KSV SS SPWYG
Sbjct: 5 MASCGIGSRCAFTGGQLSSVKPQNNQLLGVGGGHGEARLTMRKATGKKSVAASSDSPWYG 64
Query: 51 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
PDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG
Sbjct: 65 PDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALG 124
Query: 111 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 170
CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P+L+HAQSILAI ACQV+LMGA+
Sbjct: 125 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPNLVHAQSILAILACQVILMGAI 184
Query: 171 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
EGYR+AGGPLGEVTDP+YPGG+FDPLG ADDP+AFAELKVKE+KNGRLAMFSMFGFFVQA
Sbjct: 185 EGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKNGRLAMFSMFGFFVQA 244
Query: 231 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 245 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|359754903|gb|AEV59641.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis maydelliana]
Length = 235
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/232 (93%), Positives = 222/232 (95%), Gaps = 2/232 (0%)
Query: 31 RISMRK--TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 88
+ +MRK T K SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 4 KFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 63
Query: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 148
TFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP
Sbjct: 64 TFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 123
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAEL
Sbjct: 124 SLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEL 183
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
KVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNF
Sbjct: 184 KVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 235
>gi|116784226|gb|ABK23263.1| unknown [Picea sitchensis]
gi|116792001|gb|ABK26194.1| unknown [Picea sitchensis]
gi|224285000|gb|ACN40229.1| unknown [Picea sitchensis]
gi|224285305|gb|ACN40377.1| unknown [Picea sitchensis]
Length = 278
Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/260 (85%), Positives = 237/260 (91%), Gaps = 9/260 (3%)
Query: 14 GKAVNLAPSGNELSNGG------RISMRK-TGSKSV--SSGSPWYGPDRVKYLGPFSGEP 64
G+ ++ P N+L G R++MRK TG KSV SS SPWYGPDRV YLGPFSGEP
Sbjct: 19 GQLSSVKPQNNQLLGVGGGHGEARLTMRKATGKKSVAASSDSPWYGPDRVLYLGPFSGEP 78
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKF
Sbjct: 79 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKF 138
Query: 125 GEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVT 184
GEAVWFKAGAQIFSEGGLDYLG+P+L+HAQSILAI ACQV+LMGA+EGYR+AGGPLGEVT
Sbjct: 139 GEAVWFKAGAQIFSEGGLDYLGSPNLVHAQSILAILACQVILMGAIEGYRVAGGPLGEVT 198
Query: 185 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 244
DP+YPGG+FDPLG ADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADH
Sbjct: 199 DPIYPGGNFDPLGWADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 258
Query: 245 LADPVNNNAWAYATNFVPGK 264
LADPVNNNAWAYATNFVPGK
Sbjct: 259 LADPVNNNAWAYATNFVPGK 278
>gi|116781997|gb|ABK22330.1| unknown [Picea sitchensis]
Length = 278
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/274 (81%), Positives = 243/274 (88%), Gaps = 10/274 (3%)
Query: 1 MATSTMALSSSFVGKAVN-LAPSGNELSNGG------RISMRK-TGSKSV--SSGSPWYG 50
MA+ + +F G ++ + P N+L G R++MR+ TG KSV SS SPWYG
Sbjct: 5 MASCGIGSRCAFTGGQLSSVKPQNNQLLGVGGGHGEARLTMREATGKKSVAASSDSPWYG 64
Query: 51 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
PDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG
Sbjct: 65 PDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALG 124
Query: 111 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 170
CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P+L+HAQSILAI ACQV+LMGA+
Sbjct: 125 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPNLVHAQSILAILACQVILMGAI 184
Query: 171 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
EGYR+AGGPLGEVTDP+YPGG+FDPLG ADDP+AFAELKVKE+KNGRLAMFSMFGFFVQA
Sbjct: 185 EGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKNGRLAMFSMFGFFVQA 244
Query: 231 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 245 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|47169444|pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting Chlorophyll AB
Protein Complex From Pea Thylakoid Membranes
Length = 232
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/228 (93%), Positives = 220/228 (96%)
Query: 37 TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
T K SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNREL
Sbjct: 5 TTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNREL 64
Query: 97 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 156
EVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSI
Sbjct: 65 EVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSI 124
Query: 157 LAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNG 216
LAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNG
Sbjct: 125 LAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNG 184
Query: 217 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 185 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 232
>gi|224284588|gb|ACN40027.1| unknown [Picea sitchensis]
Length = 278
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/274 (81%), Positives = 242/274 (88%), Gaps = 10/274 (3%)
Query: 1 MATSTMALSSSFVGKAVN-LAPSGNELSNGG------RISMRK-TGSKSV--SSGSPWYG 50
MA+ + +F G ++ + P N+L G R++MRK TG KSV SS SPWYG
Sbjct: 5 MASCGIGSRCAFTGGQLSSVKPQNNQLLGVGGGHGEARLTMRKATGKKSVAASSDSPWYG 64
Query: 51 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
PDRV YLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG
Sbjct: 65 PDRVLYLGPFSGEQPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALG 124
Query: 111 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 170
CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P+L+HAQSILAI ACQV+LMGA+
Sbjct: 125 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPNLVHAQSILAILACQVILMGAI 184
Query: 171 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
EGYR+AGGPLGEVTDP+YPGG+FDPLG ADDP+AFAELKVKE+KNGRLAMFSMFGFFVQA
Sbjct: 185 EGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKNGRLAMFSMFGFFVQA 244
Query: 231 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 245 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|317454924|gb|ADV19258.1| chlorophyll a/b-binding protein-like protein [Helleborus
orientalis]
Length = 232
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/232 (93%), Positives = 222/232 (95%), Gaps = 1/232 (0%)
Query: 34 MRKTGSK-SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
MRKT +K S SPWYGPDRVKYLGPFSGE PSYL+GEFPGDYGWDTAGLSADPETFAK
Sbjct: 1 MRKTVAKPKTVSSSPWYGPDRVKYLGPFSGEAPSYLSGEFPGDYGWDTAGLSADPETFAK 60
Query: 93 NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIH 152
NRELEVIHCRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+H
Sbjct: 61 NRELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVH 120
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
AQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE
Sbjct: 121 AQSILAIWATQVILMGAVEGYRIAGGPLGEVEDPLYPGGSFDPLGLADDPEAFAELKVKE 180
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
IKNGRLAMFSMFGFFV AIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 181 IKNGRLAMFSMFGFFVXAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 232
>gi|227139|prf||1615137B chlorophyll a/b binding protein P27
Length = 233
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/232 (91%), Positives = 224/232 (96%), Gaps = 2/232 (0%)
Query: 35 RKTGSKSVSSG--SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
+ TG KSV++ SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK
Sbjct: 2 KATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 61
Query: 93 NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIH 152
NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIH
Sbjct: 62 NRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIH 121
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
AQSILAIWACQV+LMGA+EGYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+AFAELKVKE
Sbjct: 122 AQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKE 181
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
IKNGRLAMFSMFGFFVQAIVTGKGP+ENLADH+ADPVNNNAWAYATNFVPGK
Sbjct: 182 IKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVNNNAWAYATNFVPGK 233
>gi|62176932|emb|CAG25596.1| putative chlorophyll a/b binding protein [Triticum durum]
Length = 250
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/247 (88%), Positives = 227/247 (91%), Gaps = 3/247 (1%)
Query: 9 SSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPS 66
SSSF GKAV PS + L R++MRKT +K+ VSS SPWYG DRV YLG SGEPPS
Sbjct: 5 SSSFAGKAVKNLPS-SALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGSLSGEPPS 63
Query: 67 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 126
YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE
Sbjct: 64 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 123
Query: 127 AVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP 186
AVWF AG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGE+ DP
Sbjct: 124 AVWFMAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEIVDP 183
Query: 187 LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 246
LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH+A
Sbjct: 184 LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIA 243
Query: 247 DPVNNNA 253
DPVNNNA
Sbjct: 244 DPVNNNA 250
>gi|109157229|pdb|2BHW|A Chain A, Pea Light-Harvesting Complex Ii At 2.5 Angstrom Resolution
gi|109157230|pdb|2BHW|B Chain B, Pea Light-Harvesting Complex Ii At 2.5 Angstrom Resolution
gi|109157231|pdb|2BHW|C Chain C, Pea Light-Harvesting Complex Ii At 2.5 Angstrom Resolution
Length = 232
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/228 (92%), Positives = 219/228 (96%)
Query: 37 TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
T K SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNREL
Sbjct: 5 TTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNREL 64
Query: 97 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 156
EVIH RWAMLGALG VFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSI
Sbjct: 65 EVIHSRWAMLGALGSVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSI 124
Query: 157 LAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNG 216
LAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNG
Sbjct: 125 LAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNG 184
Query: 217 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 185 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 232
>gi|63003222|dbj|BAD97888.1| CAB homologue1 [Lemna paucicostata]
Length = 231
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/231 (92%), Positives = 221/231 (95%), Gaps = 2/231 (0%)
Query: 32 ISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 89
+SMRKT +K +SGSPWYGPDRVKYLGPFSGE PSYLTGEF GDYGWDTAGLSADPET
Sbjct: 1 VSMRKTAAKPKPAASGSPWYGPDRVKYLGPFSGEAPSYLTGEFAGDYGWDTAGLSADPET 60
Query: 90 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 149
FAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPS
Sbjct: 61 FAKNRELEVIHARWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 120
Query: 150 LIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELK 209
L+HAQSILAIWA QV+LMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELK
Sbjct: 121 LVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELK 180
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNF
Sbjct: 181 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 231
>gi|47026843|gb|AAT08647.1| chloroplast chlorophyll A-B binding protein 3C [Hyacinthus
orientalis]
Length = 220
Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/220 (96%), Positives = 217/220 (98%)
Query: 42 VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 101
VSSGSPWYGP+RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC
Sbjct: 1 VSSGSPWYGPERVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 60
Query: 102 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 161
RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWA
Sbjct: 61 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWA 120
Query: 162 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 221
QV+LMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF
Sbjct: 121 TQVLLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 180
Query: 222 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV 261
SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFV
Sbjct: 181 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFV 220
>gi|12324161|gb|AAG52048.1|AC022455_2 chlorophyll A-B-binding protein 2 precursor, 5' partial; 1-750
[Arabidopsis thaliana]
Length = 249
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/249 (85%), Positives = 230/249 (92%), Gaps = 2/249 (0%)
Query: 18 NLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDY 76
L+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDY
Sbjct: 1 KLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDY 60
Query: 77 GWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQI 136
GWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QI
Sbjct: 61 GWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQI 120
Query: 137 FSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDP 195
FS+GGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG GPLGE D LYPGGSFDP
Sbjct: 121 FSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDP 180
Query: 196 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA 255
LGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWA
Sbjct: 181 LGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWA 240
Query: 256 YATNFVPGK 264
+ATNFVPGK
Sbjct: 241 FATNFVPGK 249
>gi|115799|sp|P15195.1|CB23_POLMU RecName: Full=Chlorophyll a-b binding protein type 1 member F3,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type I F3; Short=CAB-F3; AltName: Full=LHCP;
Flags: Precursor
gi|169440|gb|AAA68425.1| chlorophyll a/b-binding protein F3 [Polystichum munitum]
Length = 265
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/269 (81%), Positives = 235/269 (87%), Gaps = 9/269 (3%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG-----GRISMRKTGSKSVSSGSPWYGPDRVK 55
MATST AL+S+F G+ L P NELS R+ M SK+ SGS WYG DR
Sbjct: 1 MATSTAALTSTFSGQ--QLKPV-NELSRKVGAGEARVQMMAPKSKA-PSGSIWYGSDRPL 56
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFSG PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE
Sbjct: 57 YLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPE 116
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA+NGVKFGEAVWFKAG+QIF+EGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+
Sbjct: 117 LLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 176
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 177 AGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 236
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL+DHLADP NNAWAYATNF PGK
Sbjct: 237 GPIENLSDHLADPAVNNAWAYATNFTPGK 265
>gi|20939|emb|CAA43907.1| chlorophyll a/b-binding protein [Pinus thunbergii]
Length = 266
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/269 (81%), Positives = 233/269 (86%), Gaps = 8/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MAT++ SSS G+ + L P NEL + RI+MR+T + S WYGPDR K
Sbjct: 1 MATASAIQSSSLAGQTL-LRPQQNELVKKVGTAQARITMRRTVRSAPES--IWYGPDRPK 57
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC+FPE
Sbjct: 58 YLGPFSEGTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCLFPE 117
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG +EGYR+
Sbjct: 118 LLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRV 177
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 178 GGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 237
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 238 GPIENLYDHLADPVANNAWAYATNFVPGK 266
>gi|168043963|ref|XP_001774452.1| predicted protein [Physcomitrella patens subsp. patens]
gi|4757371|dbj|BAA77273.1| chlorophyll a/b-binding protein precursor [Physcomitrella patens]
gi|162674164|gb|EDQ60676.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/269 (80%), Positives = 236/269 (87%), Gaps = 6/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELS---NGG--RISMRKTGSKSVSSGSPWYGPDRVK 55
MAT+ A++S+ + L P +ELS N G R++MRKT SKS S S WYG DR K
Sbjct: 1 MATAATAMNSTVLAGQALLKPV-SELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPK 59
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
+LGPFSGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PE
Sbjct: 60 FLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPE 119
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA++GVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+
Sbjct: 120 LLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 179
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLG+VTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 180 AGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GPLENL DHLADPV NNAWAYATNFVPG
Sbjct: 240 GPLENLNDHLADPVANNAWAYATNFVPGN 268
>gi|28630973|gb|AAO45885.1| chlorophyll a/b-binding protein precursor [Citrus limon]
Length = 216
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/216 (99%), Positives = 216/216 (100%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
MAT+TMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF
Sbjct: 1 MATATMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL 180
GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL
Sbjct: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL 180
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNG 216
GEVTDPLYPGGSFDPLGLADDP+AFAELKVKEIKNG
Sbjct: 181 GEVTDPLYPGGSFDPLGLADDPKAFAELKVKEIKNG 216
>gi|167997439|ref|XP_001751426.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168066892|ref|XP_001785364.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168066898|ref|XP_001785367.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663036|gb|EDQ49825.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663039|gb|EDQ49828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697407|gb|EDQ83743.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/269 (80%), Positives = 234/269 (86%), Gaps = 7/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG-----GRISMRKTGSKSVSSGSPWYGPDRVK 55
MA +T S++ G+ V L P NELS R++MR+T SKS S S WYG DR K
Sbjct: 1 MAGATAMHSTALAGQGV-LKPV-NELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPK 58
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
+LGPFSGE PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PE
Sbjct: 59 FLGPFSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPE 118
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA++GVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+
Sbjct: 119 LLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 178
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 179 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 238
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GPLENL DHLADPV NNAWAYATNF PG
Sbjct: 239 GPLENLNDHLADPVANNAWAYATNFTPGN 267
>gi|3417451|dbj|BAA32346.1| light-harvesting chlorophyll a/b-binding protein of photosystem II
[Cryptomeria japonica]
Length = 266
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/266 (80%), Positives = 230/266 (86%), Gaps = 2/266 (0%)
Query: 1 MATSTMALSSSFVGKAVN--LAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLG 58
MA S +F G+ VN A L+ G R++MR+ +K+ S SPWYGPDRVKYLG
Sbjct: 1 MAAMAKLSSPAFAGQMVNGDFARQLRALNVGERVNMRRGATKAPVSSSPWYGPDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGEPPSYLTGEFP G DPETFAKNRELEVIH RWAMLGALGCVFPELL+
Sbjct: 61 PFSGEPPSYLTGEFPVTTGGTPPVCQPDPETFAKNRELEVIHARWAMLGALGCVFPELLS 120
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 180
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGE+TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF+VQAIVTGKGPL
Sbjct: 181 PLGEITDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFYVQAIVTGKGPL 240
Query: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAYATNFVPGK 266
>gi|297826903|ref|XP_002881334.1| chlorophyll A-B-binding protein 2 precursor [Arabidopsis lyrata
subsp. lyrata]
gi|297327173|gb|EFH57593.1| chlorophyll A-B-binding protein 2 precursor [Arabidopsis lyrata
subsp. lyrata]
Length = 245
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/237 (89%), Positives = 224/237 (94%), Gaps = 2/237 (0%)
Query: 30 GRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 88
GR++MRKT +K SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 9 GRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 68
Query: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 148
TFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFS+GGLDYLGNP
Sbjct: 69 TFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNP 128
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAE 207
SL+HAQSILAIWA QV+LMGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAE
Sbjct: 129 SLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAE 188
Query: 208 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
LKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 189 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 245
>gi|168018669|ref|XP_001761868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168018837|ref|XP_001761952.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686923|gb|EDQ73309.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687007|gb|EDQ73393.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/269 (79%), Positives = 232/269 (86%), Gaps = 7/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG-----GRISMRKTGSKSVSSGSPWYGPDRVK 55
MA +T S++ G++ L NELS R++MR+T SKS S S WYG DR K
Sbjct: 1 MAAATAMHSTALAGQS--LVKPVNELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPK 58
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
+LGPFSGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PE
Sbjct: 59 FLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPE 118
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA++GVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+
Sbjct: 119 LLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 178
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 179 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 238
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GPLENL DHLADPV NNAWAYATNF PG
Sbjct: 239 GPLENLNDHLADPVANNAWAYATNFTPGN 267
>gi|255581778|ref|XP_002531690.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223528666|gb|EEF30681.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 265
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/270 (82%), Positives = 236/270 (87%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F G+ L PS NEL GGRI+MR+T KS S WYGPDR
Sbjct: 1 MATSAIQ-QSAFAGQTA-LKPS-NELVRKVGSVGGGRITMRRT-VKSAPQ-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+LA+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG VEGYR
Sbjct: 116 EILAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE DP+YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDPIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 236 KGPIENLFDHVADPVANNAWAYATNFVPGK 265
>gi|168006129|ref|XP_001755762.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693081|gb|EDQ79435.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 265
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/269 (81%), Positives = 233/269 (86%), Gaps = 9/269 (3%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG-----GRISMRKTGSKSVSSGSPWYGPDRVK 55
MA +T S++ G+++ L P NELS RISMRKT SKS S S WYG DR K
Sbjct: 1 MAAATAMHSTALAGQSL-LKPV-NELSRKVGNVEARISMRKTASKS--SDSIWYGADRPK 56
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFSGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGCV PE
Sbjct: 57 YLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPE 116
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA+NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+
Sbjct: 117 LLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRV 176
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLG+VTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 177 AGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 236
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GPLENL DHLADPV NNAWAYATNF PG
Sbjct: 237 GPLENLNDHLADPVANNAWAYATNFTPGN 265
>gi|116780878|gb|ABK21859.1| unknown [Picea sitchensis]
gi|116780908|gb|ABK21874.1| unknown [Picea sitchensis]
gi|116786305|gb|ABK24058.1| unknown [Picea sitchensis]
gi|116788326|gb|ABK24837.1| unknown [Picea sitchensis]
gi|116791751|gb|ABK26095.1| unknown [Picea sitchensis]
gi|224284118|gb|ACN39796.1| unknown [Picea sitchensis]
gi|224284899|gb|ACN40179.1| unknown [Picea sitchensis]
Length = 266
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/269 (80%), Positives = 232/269 (86%), Gaps = 8/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MAT++ SSS G+ + L P NEL ++ RI+MR+T + S WYGPDR K
Sbjct: 1 MATASAIQSSSLAGQTL-LRPHQNELVKKVGASQARITMRRTVRSAPES--IWYGPDRPK 57
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE
Sbjct: 58 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA+ GVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG +EGYR+
Sbjct: 118 LLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRV 177
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 178 GGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 237
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 238 GPIENLFDHLADPTANNAWAYATNFVPGK 266
>gi|168044688|ref|XP_001774812.1| predicted protein [Physcomitrella patens subsp. patens]
gi|41529316|dbj|BAD08519.1| light-harvesting chlorophyll a/b-binding protein 2 [Physcomitrella
patens subsp. patens]
gi|162673836|gb|EDQ60353.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/238 (86%), Positives = 220/238 (92%)
Query: 27 SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 86
S+ R++MR+T +KS S S WYG DR KYLGPFSGE PSYL GEF GDYGWDTAGLS+D
Sbjct: 30 SSQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLNGEFAGDYGWDTAGLSSD 89
Query: 87 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG 146
PETFA+NRELEVIH RWAMLGALGCV PELLA++GVKFGEAVWFKAGAQIFSEGGLDYLG
Sbjct: 90 PETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLG 149
Query: 147 NPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFA 206
NPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLADDP+ FA
Sbjct: 150 NPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFA 209
Query: 207 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHLADPV NNAWAYATNFVPG
Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFVPGN 267
>gi|167997305|ref|XP_001751359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697340|gb|EDQ83676.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/269 (79%), Positives = 232/269 (86%), Gaps = 7/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN-----GGRISMRKTGSKSVSSGSPWYGPDRVK 55
MA +T S++ G++ L NELS R++MR+T +KS S S WYG DR K
Sbjct: 1 MAAATAMHSTALAGQS--LFQPVNELSRKVGNVDSRVTMRRTVNKSAGSDSIWYGADRPK 58
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
+LGPFSGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PE
Sbjct: 59 FLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPE 118
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA++GVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+
Sbjct: 119 LLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 178
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 179 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 238
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GPLENL DHLADPV NNAWAYATNF PG
Sbjct: 239 GPLENLNDHLADPVANNAWAYATNFTPGN 267
>gi|168019112|ref|XP_001762089.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686806|gb|EDQ73193.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/265 (80%), Positives = 228/265 (86%), Gaps = 3/265 (1%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG-GRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA T S++ G+ S NELS G + R T K+ SS S WYG DR KYLGP
Sbjct: 1 MAACTATHSTALAGQTA--LKSINELSRKVGNVQARVTMRKASSSDSIWYGADRPKYLGP 58
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
SGE PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGCV PELLA+
Sbjct: 59 LSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGP
Sbjct: 119 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGP 178
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 179 LGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 238
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NL+DHLADPV NNAWAYATNFVPG
Sbjct: 239 NLSDHLADPVANNAWAYATNFVPGN 263
>gi|116779526|gb|ABK21323.1| unknown [Picea sitchensis]
Length = 266
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/269 (79%), Positives = 232/269 (86%), Gaps = 8/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MAT++ SSS G+ + L P NEL ++ RI+MR+T ++ S WYGPDR K
Sbjct: 1 MATASAIQSSSLAGQTL-LRPHQNELVKKVGASQARITMRRT--VRIAPESIWYGPDRPK 57
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 58 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 117
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA+ GVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG +EGYR+
Sbjct: 118 LLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRV 177
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 178 GGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 237
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 238 GPIENLFDHLADPTANNAWAYATNFVPGK 266
>gi|53627206|gb|AAU89254.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus merkusii]
Length = 256
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/252 (84%), Positives = 226/252 (89%), Gaps = 11/252 (4%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYL 57
S +F G ++ L P N+L G R++MRK +K VS S SPWYGPDRV YL
Sbjct: 5 SCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKVSASASTSPWYGPDRVLYL 64
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 65 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 124
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 125 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 184
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 185 GPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 244
Query: 238 LENLADHLADPV 249
+ENLADHLADPV
Sbjct: 245 IENLADHLADPV 256
>gi|225447576|ref|XP_002271687.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic
[Vitis vinifera]
gi|147794485|emb|CAN71610.1| hypothetical protein VITISV_000630 [Vitis vinifera]
Length = 265
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/270 (80%), Positives = 233/270 (86%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F G+ P NEL GGRI+MR+T KS S WYGPDR
Sbjct: 1 MATSAIQ-RSAFAGQTALKQP--NELVRKVGGLGGGRITMRRT-VKSTPQ-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR
Sbjct: 116 EILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE D +YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDAIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 236 KGPIENLVDHLADPVANNAWAYATNFVPGK 265
>gi|116779784|gb|ABK21429.1| unknown [Picea sitchensis]
gi|116782287|gb|ABK22448.1| unknown [Picea sitchensis]
gi|116785934|gb|ABK23914.1| unknown [Picea sitchensis]
gi|116786318|gb|ABK24064.1| unknown [Picea sitchensis]
gi|116791776|gb|ABK26103.1| unknown [Picea sitchensis]
gi|116793629|gb|ABK26818.1| unknown [Picea sitchensis]
gi|148909078|gb|ABR17641.1| unknown [Picea sitchensis]
gi|224284321|gb|ACN39896.1| unknown [Picea sitchensis]
gi|224284480|gb|ACN39974.1| unknown [Picea sitchensis]
gi|224284600|gb|ACN40033.1| unknown [Picea sitchensis]
gi|224285740|gb|ACN40585.1| unknown [Picea sitchensis]
gi|224285871|gb|ACN40649.1| unknown [Picea sitchensis]
Length = 266
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/269 (79%), Positives = 231/269 (85%), Gaps = 8/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MAT++ SSS G+ + L P NEL ++ RI+MR+T + S WYGPDR K
Sbjct: 1 MATASAIQSSSLAGQTL-LRPHQNELVKKVGASQARITMRRTVRSAPES--IWYGPDRPK 57
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 58 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 117
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA+ GVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG +EGYR+
Sbjct: 118 LLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRV 177
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 178 GGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 237
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 238 GPIENLFDHLADPTANNAWAYATNFVPGK 266
>gi|1345698|sp|P27518.2|CB21_GOSHI RecName: Full=Chlorophyll a-b binding protein 151, chloroplastic;
AltName: Full=LHCII type II CAB-151; Short=LHCP; Flags:
Precursor
gi|452314|emb|CAA38025.1| chlorophyll ab binding protein [Gossypium hirsutum]
Length = 265
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/270 (80%), Positives = 234/270 (86%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELS------NGGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F G+ NEL GGR+SMR+T KS + S WYGPDR
Sbjct: 1 MATSAIQ-QSAFAGQTA--LKQSNELVCKIGAVGGGRVSMRRT-VKSAPT-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP
Sbjct: 56 KYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG VEGYR
Sbjct: 116 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 236 KGPIENLFDHLADPVANNAWAYATNFVPGK 265
>gi|53627202|gb|AAU89252.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus radiata]
Length = 256
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/252 (84%), Positives = 225/252 (89%), Gaps = 11/252 (4%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYL 57
S +F G ++ L P N+L G R+ MRK +K VS S SPWYGPDRV YL
Sbjct: 5 SCAFAGGQISSLKPHTNQLLGVGAGVHGEARVMMRKATTKKVSVSASTSPWYGPDRVLYL 64
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 65 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 124
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 125 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 184
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 185 GPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 244
Query: 238 LENLADHLADPV 249
+ENLADHLADPV
Sbjct: 245 IENLADHLADPV 256
>gi|115773|sp|P04159.1|CB21_PEA RecName: Full=Chlorophyll a-b binding protein AB96; AltName:
Full=LHCII type I CAB-AB96; Short=LHCP; AltName:
Full=Major 15
gi|169051|gb|AAA33650.1| polypeptide 15 precursor, partial [Pisum sativum]
Length = 228
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/228 (91%), Positives = 216/228 (94%)
Query: 37 TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
T K SS SPW+GPD VKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 1 TTKKVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 60
Query: 97 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 156
EVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSI
Sbjct: 61 EVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSI 120
Query: 157 LAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNG 216
LAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+ PEAFAELKVKE+KNG
Sbjct: 121 LAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELKNG 180
Query: 217 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
RLAMFSMFGFFV AIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 181 RLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 228
>gi|543938|sp|Q00827.1|CB48_MAIZE RecName: Full=Chlorophyll a-b binding protein 48, chloroplastic;
AltName: Full=LHCII type I CAB-48; Short=LHCP; Flags:
Precursor
gi|22228|emb|CAA44888.1| chlorophyll a/b binding protein precursor [Zea mays]
Length = 264
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/267 (80%), Positives = 229/267 (85%), Gaps = 6/267 (2%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TMA++S + VGK A ++ GRI+MRKT +K SGSPWYG DRV YL
Sbjct: 1 MAAATMAITSRALVGKP---AAGTRDVFGEGRITMRKTAAKPKPARSGSPWYGADRVLYL 57
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SG PPSYLTGEFPGDYGWDT GLSADPETFAKNRELEVIHCRWA+ LGCVFPELL
Sbjct: 58 GPLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELL 117
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGE VWFKAG+QIFSEGGL + GNPSL+HAQSILAIWACQVVLMGAVEGY +AG
Sbjct: 118 ARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAG 177
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
G LGEV DPLY GGSFDPLGL DDPE FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 178 GRLGEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
+ENLADHL DPVNNNAWAYATNFVPGK
Sbjct: 238 IENLADHLTDPVNNNAWAYATNFVPGK 264
>gi|398599|emb|CAA52750.1| chlorophyll a/b binding protein [Amaranthus hypochondriacus]
Length = 264
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/269 (79%), Positives = 234/269 (86%), Gaps = 10/269 (3%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MATST+ S+FVG+ L NEL NGGR SMR+T KS S WYGPDR K
Sbjct: 1 MATSTIQ-QSAFVGQ--TLLKQQNELVRKVGGNGGRFSMRRT-VKSAPQ-SIWYGPDRPK 55
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE
Sbjct: 56 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 115
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+L++NGVKFGEAVWFKAG+QIF EGGLDYLGNP+LIHAQSILAIWACQVVLMG +EGYR+
Sbjct: 116 ILSKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRV 175
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE D +YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 176 GGGPLGEGLDKIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 235
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL+DHLADPV NNAWAYATNFVPGK
Sbjct: 236 GPIENLSDHLADPVANNAWAYATNFVPGK 264
>gi|168025870|ref|XP_001765456.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683306|gb|EDQ69717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 266
Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/269 (78%), Positives = 232/269 (86%), Gaps = 8/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG-----GRISMRKTGSKSVSSGSPWYGPDRVK 55
MA +T S++ G+++ NELS+ R+SMRKT SKS S S WYG DR K
Sbjct: 1 MAAATAMHSTTLAGQSLFRF---NELSSKVGSSQARVSMRKTVSKSSGSDSIWYGADRPK 57
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
+LGPFSGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PE
Sbjct: 58 WLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPE 117
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA++GVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+
Sbjct: 118 LLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRV 177
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLG+VTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 178 AGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 237
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GPLENL DHLADPV NNAWAYATNF PG
Sbjct: 238 GPLENLNDHLADPVANNAWAYATNFTPGN 266
>gi|168053792|ref|XP_001779318.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669234|gb|EDQ55825.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/269 (79%), Positives = 231/269 (85%), Gaps = 11/269 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG-----GRISMRKTGSKSVSSGSPWYGPDRVK 55
MA +T S++ G+++ L P NELS R+SMRK S S S WYG DR K
Sbjct: 1 MAAATAMHSTTLAGQSL-LKPV-NELSRKVGTSEARVSMRK----SSGSDSIWYGADRPK 54
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
+LGPFSGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGCV PE
Sbjct: 55 FLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPE 114
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA+NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+
Sbjct: 115 LLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 174
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 175 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 234
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GPLENL DHLADPV NNAWAYATNF PG
Sbjct: 235 GPLENLNDHLADPVANNAWAYATNFTPGN 263
>gi|167997791|ref|XP_001751602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697583|gb|EDQ83919.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/269 (79%), Positives = 231/269 (85%), Gaps = 7/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN-----GGRISMRKTGSKSVSSGSPWYGPDRVK 55
MA + S+ G+++ L P NELS R++MR+T SKS S S WYG DR K
Sbjct: 1 MAAAIAMHSTGLAGQSL-LKPV-NELSRRVGNVDARVTMRRTVSKSARSDSIWYGADRPK 58
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
+LGPFSGE PSYL GEF GDYGWDTAGLS+D ETFA+NRELEVIH RWAMLGALGC+ PE
Sbjct: 59 FLGPFSGETPSYLNGEFAGDYGWDTAGLSSDLETFARNRELEVIHARWAMLGALGCLTPE 118
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA++GVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+
Sbjct: 119 LLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 178
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 179 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 238
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GPLENL DHLADPV NNAWAYATNF PG
Sbjct: 239 GPLENLNDHLADPVANNAWAYATNFTPGN 267
>gi|168003066|ref|XP_001754234.1| predicted protein [Physcomitrella patens subsp. patens]
gi|41529314|dbj|BAD08518.1| light-harvesting chlorophyll a/b-binding protein 1 [Physcomitrella
patens subsp. patens]
gi|162694788|gb|EDQ81135.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/234 (87%), Positives = 218/234 (93%)
Query: 31 RISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF 90
R++MRKT SKS S S WYG DR K+LGPFSGE PSYL GEF GDYGWDTAGLS+DPETF
Sbjct: 34 RVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETF 93
Query: 91 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 150
A+NRELEVIH RWAMLGALGC+ PELLA++GVKFGEAVWFKAGAQIFSEGGLDYLGNPSL
Sbjct: 94 ARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 153
Query: 151 IHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKV 210
+HAQSILAIWACQV+LMGAVEGYR+AGGPLG+VTDP+YPGGSFDPLGLADDP+ FAELKV
Sbjct: 154 VHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKV 213
Query: 211 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHLADPV NNAWAYATNFVPG
Sbjct: 214 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFVPGN 267
>gi|53627208|gb|AAU89255.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus roxburghii]
Length = 256
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/252 (84%), Positives = 225/252 (89%), Gaps = 11/252 (4%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYL 57
S +F G ++ L P N+L G R++MRK +K VS S SPWYGPDRV YL
Sbjct: 5 SCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKAATKKVSVSASTSPWYGPDRVLYL 64
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 65 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 124
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 125 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 184
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDP+YPGGSFDPL LADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 185 GPLGEVTDPIYPGGSFDPLRLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 244
Query: 238 LENLADHLADPV 249
+ENLADHLADPV
Sbjct: 245 IENLADHLADPV 256
>gi|53627200|gb|AAU89251.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus ponderosa]
Length = 256
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/252 (84%), Positives = 225/252 (89%), Gaps = 11/252 (4%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYL 57
S +F G ++ L P N+L G R++MRK +K VS S SPWYGPDRV YL
Sbjct: 5 SCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKVSVSASTSPWYGPDRVLYL 64
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 65 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 124
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 125 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 184
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLG VTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 185 GPLGXVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 244
Query: 238 LENLADHLADPV 249
+ENLADHLADPV
Sbjct: 245 IENLADHLADPV 256
>gi|116782134|gb|ABK22382.1| unknown [Picea sitchensis]
gi|116783875|gb|ABK23122.1| unknown [Picea sitchensis]
gi|116792700|gb|ABK26462.1| unknown [Picea sitchensis]
gi|148905950|gb|ABR16136.1| unknown [Picea sitchensis]
gi|224285016|gb|ACN40237.1| unknown [Picea sitchensis]
Length = 266
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/269 (79%), Positives = 231/269 (85%), Gaps = 8/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MAT++ SS G+ + L P NEL ++ RI+MR+T + S WYGPDR K
Sbjct: 1 MATASAIQISSLAGQTL-LRPQQNELVSKVGASQARITMRRTVRSAPES--IWYGPDRPK 57
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 58 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 117
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA+ GVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG +EGYR+
Sbjct: 118 LLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAFQVVLMGLIEGYRV 177
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 178 GGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 237
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DHLADP NNNAWAYATNFVPGK
Sbjct: 238 GPIENLFDHLADPANNNAWAYATNFVPGK 266
>gi|53627226|gb|AAU89264.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus nelsonii]
Length = 256
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/252 (84%), Positives = 226/252 (89%), Gaps = 11/252 (4%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTGSKSV---SSGSPWYGPDRVKYL 57
S +F G ++ L P N+L G R++MRK+ +K +S SPWYGPDRV YL
Sbjct: 5 SCAFAGGQISSLKPHTNQLVGVGAGVHGESRVTMRKSATKKSVVSASPSPWYGPDRVLYL 64
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 65 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 124
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 125 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAG 184
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 185 GPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 244
Query: 238 LENLADHLADPV 249
+ENLADHLADPV
Sbjct: 245 IENLADHLADPV 256
>gi|168009155|ref|XP_001757271.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691394|gb|EDQ77756.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 265
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/269 (79%), Positives = 233/269 (86%), Gaps = 9/269 (3%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG-----GRISMRKTGSKSVSSGSPWYGPDRVK 55
MA +T S++ G+++ L P NELS R++MR+T + S S WYG DR K
Sbjct: 1 MAAATAMHSTTLAGQSL-LKPV-NELSRKVGSSEARVTMRRTVKST--SDSIWYGADRPK 56
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFSGE PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PE
Sbjct: 57 YLGPFSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPE 116
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA++GVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+
Sbjct: 117 LLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRV 176
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLGE+TDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 177 AGGPLGEITDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 236
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GPLENL DHLADPV NNAWAYATNFVPG
Sbjct: 237 GPLENLNDHLADPVANNAWAYATNFVPGN 265
>gi|53627220|gb|AAU89261.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus monophylla]
Length = 256
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/246 (86%), Positives = 225/246 (91%), Gaps = 10/246 (4%)
Query: 14 GKAVNLAPSGNELSNGG-------RISMRKTGSK-SVSSGSP--WYGPDRVKYLGPFSGE 63
G+ +L P N+L G R++MRK+ +K SV+S SP WYGPDRV YLGPFSGE
Sbjct: 11 GQXSSLKPHTNQLLGVGAGVHGESRVTMRKSATKKSVASASPSPWYGPDRVLYLGPFSGE 70
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK
Sbjct: 71 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 130
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 183
FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGPLGEV
Sbjct: 131 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEV 190
Query: 184 TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 243
TDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLAD
Sbjct: 191 TDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLAD 250
Query: 244 HLADPV 249
HLADPV
Sbjct: 251 HLADPV 256
>gi|53627222|gb|AAU89262.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus remota]
Length = 256
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/246 (86%), Positives = 225/246 (91%), Gaps = 10/246 (4%)
Query: 14 GKAVNLAPSGNELSNGG-------RISMRKTGSK-SVSSGSP--WYGPDRVKYLGPFSGE 63
G+ +L P N+L G R++MRK+ +K SV+S SP WYGPDRV YLGPFSGE
Sbjct: 11 GQLSSLKPHTNQLLGVGAGVHGESRVTMRKSATKKSVASASPSPWYGPDRVLYLGPFSGE 70
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK
Sbjct: 71 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 130
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 183
FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGPLGEV
Sbjct: 131 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEV 190
Query: 184 TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 243
TDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLAD
Sbjct: 191 TDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLAD 250
Query: 244 HLADPV 249
HLADPV
Sbjct: 251 HLADPV 256
>gi|53627224|gb|AAU89263.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus longaeva]
Length = 253
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/252 (84%), Positives = 226/252 (89%), Gaps = 11/252 (4%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTGSKSV---SSGSPWYGPDRVKYL 57
S +F G ++ L P N+L G R++MRK+ +K +S SPWYGPDRV YL
Sbjct: 2 SCAFAGGQISSLKPHTNQLLGVGAGVHGESRVTMRKSATKKSVVSASPSPWYGPDRVLYL 61
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 62 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 121
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 122 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAG 181
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 182 GPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 241
Query: 238 LENLADHLADPV 249
+ENLADHLADPV
Sbjct: 242 IENLADHLADPV 253
>gi|53748425|emb|CAH59405.1| light harvesting protein 1 [Plantago major]
Length = 229
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/221 (92%), Positives = 212/221 (95%)
Query: 40 KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 99
K VSS SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Sbjct: 5 KPVSSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 64
Query: 100 HCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI 159
H RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAI
Sbjct: 65 HSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAI 124
Query: 160 WACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLA 219
WACQV+LMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLA
Sbjct: 125 WACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLA 184
Query: 220 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
MFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+
Sbjct: 185 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFCHKL 225
>gi|148909129|gb|ABR17665.1| unknown [Picea sitchensis]
Length = 266
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/269 (79%), Positives = 230/269 (85%), Gaps = 8/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MAT++ SSS G+ + L P NEL ++ RI+MR+T + S WYGPDR K
Sbjct: 1 MATASAIQSSSLAGQTL-LRPHQNELVKKVGASQARITMRRTVRSAPES--IWYGPDRPK 57
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 58 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 117
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA+ GVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QV LMG +EGYR+
Sbjct: 118 LLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQVGLMGLIEGYRV 177
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 178 GGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 237
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 238 GPIENLFDHLADPTANNAWAYATNFVPGK 266
>gi|116779839|gb|ABK21446.1| unknown [Picea sitchensis]
Length = 266
Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/269 (79%), Positives = 230/269 (85%), Gaps = 8/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MAT++ SS G+ + L P NEL ++ RI+MR+T + S WYGPDR K
Sbjct: 1 MATASAIQISSLAGQTL-LRPQQNELVSKVGASQARITMRRTVRSAPES--IWYGPDRPK 57
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDY WDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 58 YLGPFSEQTPSYLTGEFPGDYRWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 117
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA+ GVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG +EGYR+
Sbjct: 118 LLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAFQVVLMGLIEGYRV 177
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 178 GGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 237
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DHLADP NNNAWAYATNFVPGK
Sbjct: 238 GPIENLFDHLADPANNNAWAYATNFVPGK 266
>gi|2765356|emb|CAA74179.1| chlorophyll a/b-binding protein [Beta vulgaris subsp. vulgaris]
Length = 264
Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/269 (80%), Positives = 234/269 (86%), Gaps = 10/269 (3%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MATST+ S+F G+ + L P NEL NGGR SMR+T KS S WYGPDR K
Sbjct: 1 MATSTIQ-QSAFAGQTI-LKPQ-NELVRKFGGNGGRASMRRT-VKSAPQ-SIWYGPDRPK 55
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 56 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 115
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+L++NGVKFGEAVWFKAG+QIF EGGLDYLGNP+LIHAQSILAIWA QVVLMG +EGYR+
Sbjct: 116 ILSKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRV 175
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE D LYPGG+FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 176 GGGPLGEGLDKLYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 235
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL+DHLADPV NNAWA+ATNFVPGK
Sbjct: 236 GPIENLSDHLADPVANNAWAFATNFVPGK 264
>gi|77157635|dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]
Length = 265
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/270 (80%), Positives = 231/270 (85%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F G+ L P NEL GGRI+MR+T + S WYGPDR
Sbjct: 1 MATSAIQ-RSAFAGQTA-LKPQ-NELVRKIGSLGGGRITMRRTVRSAPES--IWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR
Sbjct: 116 EILARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE D +YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 236 KGPIENLYDHLADPVANNAWAYATNFVPGK 265
>gi|16374|emb|CAA27542.1| chlorophyll a/b binding protein (LHCP AB 180) [Arabidopsis
thaliana]
Length = 233
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/233 (89%), Positives = 219/233 (93%), Gaps = 2/233 (0%)
Query: 34 MRKTGSKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
MRKT +K SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+
Sbjct: 1 MRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAR 60
Query: 93 NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIH 152
NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+H
Sbjct: 61 NRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVH 120
Query: 153 AQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVK 211
AQSILAIWA QV+LMGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVK
Sbjct: 121 AQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVK 180
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 181 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 233
>gi|242038937|ref|XP_002466863.1| hypothetical protein SORBIDRAFT_01g015400 [Sorghum bicolor]
gi|241920717|gb|EER93861.1| hypothetical protein SORBIDRAFT_01g015400 [Sorghum bicolor]
Length = 262
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/264 (78%), Positives = 230/264 (87%), Gaps = 2/264 (0%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
MA S + ++SF+G+A+ P+ GGRI+MR+T KS S WYGPDR KYLGPF
Sbjct: 1 MAASALHQTTSFLGQALVSRPAAAAADAGGRITMRRT-VKSAPQ-SIWYGPDRPKYLGPF 58
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+LA+N
Sbjct: 59 SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILAKN 118
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL 180
GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ GGPL
Sbjct: 119 GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPL 178
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
GE D +YPGG+FDPLGLADDP+ AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+EN
Sbjct: 179 GEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 238
Query: 241 LADHLADPVNNNAWAYATNFVPGK 264
L DH+ADPV NNAWAYATNFVPG
Sbjct: 239 LFDHVADPVANNAWAYATNFVPGN 262
>gi|115832|sp|P20866.1|CB2_PHYPA RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|169020|gb|AAA33636.1| major chlorophyll binding protein [Physcomitrella patens]
Length = 269
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/269 (78%), Positives = 229/269 (85%), Gaps = 8/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG------GRISMRKTGSKSVSSGSPWYGPDRV 54
MA +T S++ G++ L NELS R++MR+T SKS S + WYG DR
Sbjct: 1 MAAATAMHSTALAGQS--LVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRP 58
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
K+LGPFSGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ P
Sbjct: 59 KFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTP 118
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
ELLA++GVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR
Sbjct: 119 ELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 178
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 179 VAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 238
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPG 263
KGPLENL DHLADPV NNAWAYA PG
Sbjct: 239 KGPLENLNDHLADPVANNAWAYAPTSPPG 267
>gi|1262847|gb|AAB19040.1| type 2 light-harvesting chlorophyll a/b-binding polypeptide,
partial [Pinus palustris]
Length = 246
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/234 (88%), Positives = 216/234 (92%), Gaps = 2/234 (0%)
Query: 31 RISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF 90
RI+MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 15 RITMRRTVRSAPES--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 72
Query: 91 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 150
AKNRELEVIH RWAMLGALGCVFPELLA+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L
Sbjct: 73 AKNRELEVIHSRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL 132
Query: 151 IHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKV 210
IHAQSILAIWACQVVLMG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKV
Sbjct: 133 IHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKV 192
Query: 211 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 193 KEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 246
>gi|53627198|gb|AAU89250.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus echinata]
Length = 253
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/249 (84%), Positives = 223/249 (89%), Gaps = 11/249 (4%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYL 57
S +F G ++ L P N+L G R++MRK +K VS S SPWYGPDRV YL
Sbjct: 5 SCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKVSVSASTSPWYGPDRVLYL 64
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 65 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 124
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 125 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 184
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 185 GPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 244
Query: 238 LENLADHLA 246
+ENLADHLA
Sbjct: 245 IENLADHLA 253
>gi|53627204|gb|AAU89253.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus contorta]
Length = 256
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/252 (84%), Positives = 224/252 (88%), Gaps = 11/252 (4%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYL 57
S +F G ++ L P N+L G R++MRK +K VS S SPWYGPDRV YL
Sbjct: 5 SCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKVSVPASTSPWYGPDRVLYL 64
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 65 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 124
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 125 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 184
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPL EVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 185 GPLREVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 244
Query: 238 LENLADHLADPV 249
+ENLADHLADPV
Sbjct: 245 IENLADHLADPV 256
>gi|146150146|gb|ABQ02464.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 263
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/269 (78%), Positives = 232/269 (86%), Gaps = 11/269 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN-----GGRISMRKTGSKSVSSGSPWYGPDRVK 55
MA S + ++SF+G A P +EL GGRI+MR+T KS S WYGPDR K
Sbjct: 1 MAASALQQTTSFLGTA----PRRDELVRRVGDFGGRITMRRT-VKSAPQ-SIWYGPDRPK 54
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE
Sbjct: 55 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 114
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR+
Sbjct: 115 ILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRV 174
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KN RLAMFSMFGFFVQAIVTGK
Sbjct: 175 GGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNSRLAMFSMFGFFVQAIVTGK 234
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENLADH+ADPVNNNAWAYATNFVPGK
Sbjct: 235 GPIENLADHVADPVNNNAWAYATNFVPGK 263
>gi|226492741|ref|NP_001148271.1| chlorophyll a-b binding protein [Zea mays]
gi|195617084|gb|ACG30372.1| chlorophyll a-b binding protein [Zea mays]
gi|238006080|gb|ACR34075.1| unknown [Zea mays]
gi|414871640|tpg|DAA50197.1| TPA: type II light-harvesting chlorophyll a /b-binding protein
isoform 1 [Zea mays]
gi|414871641|tpg|DAA50198.1| TPA: type II light-harvesting chlorophyll a /b-binding protein
isoform 2 [Zea mays]
gi|414871644|tpg|DAA50201.1| TPA: light harvesting chlorophyll binding protein9 isoform 1 [Zea
mays]
gi|414871645|tpg|DAA50202.1| TPA: light harvesting chlorophyll binding protein9 isoform 2 [Zea
mays]
Length = 260
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/264 (79%), Positives = 232/264 (87%), Gaps = 4/264 (1%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
MA S + ++SF+G+A+ +G + GGRI+MR+T KSV S WYGPDR KYLGPF
Sbjct: 1 MAASALHQTTSFLGQALVSRAAG--VDAGGRITMRRT-VKSVPQ-SIWYGPDRPKYLGPF 56
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+LA+N
Sbjct: 57 SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILAKN 116
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL 180
GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ GGPL
Sbjct: 117 GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPL 176
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
GE D +YPGG+FDPLGLADDP+ AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+EN
Sbjct: 177 GEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 236
Query: 241 LADHLADPVNNNAWAYATNFVPGK 264
L DH+ADPV NNAWAYATNFVPG
Sbjct: 237 LFDHVADPVANNAWAYATNFVPGN 260
>gi|115775|sp|P10049.1|CB21_PINTH RecName: Full=Chlorophyll a-b binding protein type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|20935|emb|CAA31773.1| chlorophylla/b-binding preprotein (AA -37 to 229) [Pinus
thunbergii]
Length = 266
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/269 (78%), Positives = 228/269 (84%), Gaps = 8/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MAT++ SSS G+ + L P NEL + RI+MR+T + S WYGPDR K
Sbjct: 1 MATASAIQSSSLAGQTL-LRPQQNELVKKVGTAQARITMRRTVRSAPES--IWYGPDRPK 57
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS PSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIHCRWAMLGALGCVFPE
Sbjct: 58 YLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA+NG+KFGEAVWFKAGAQIFSEGGLDY GNP+LIHAQSILAIWACQVVLMG +EGYR+
Sbjct: 118 LLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRV 177
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GG LGE DPL PGG+FDPLGLADDPEA AELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 178 GGGTLGEGLDPLLPGGAFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 237
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 238 GPIENLYDHLADPVANNAWAYATNFVPGK 266
>gi|102140026|gb|ABF70157.1| chlorophyll A-B binding protein (CAB), putative [Musa acuminata]
Length = 264
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/269 (79%), Positives = 230/269 (85%), Gaps = 10/269 (3%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MATS + S+F G+ NEL S+ GR MR+T + + S WYGPDR K
Sbjct: 1 MATSALQ-QSAFAGQTA--LKQQNELVRRVGSSRGRFFMRRTTASTPKS--IWYGPDRPK 55
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 56 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPE 115
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+LA+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG VEGYR+
Sbjct: 116 ILAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRV 175
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE D +YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 176 GGGPLGEGLDAIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 236 GPIENLYDHLADPVANNAWAYATNFVPGK 264
>gi|407970998|ref|NP_001234739.1| chlorophyll a-b binding protein 4, chloroplastic [Solanum
lycopersicum]
gi|115803|sp|P14278.1|CB24_SOLLC RecName: Full=Chlorophyll a-b binding protein 4, chloroplastic;
AltName: Full=LHCII type I CAB-4; Short=LHCP; Flags:
Precursor
gi|170390|gb|AAA34141.1| chlorophyll a/b-binding protein precursor [Solanum lycopersicum]
Length = 265
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/270 (78%), Positives = 232/270 (85%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG------GRISMRKTGSKSVSSGSPWYGPDRV 54
MAT + S+FVG+AV S NE GRI+MR+T KS S WYG DR
Sbjct: 1 MATCAIQ-QSAFVGQAV--GKSQNEFIRKVGNFGEGRITMRRT-VKSAPQ-SIWYGEDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR
Sbjct: 116 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL+DH+ DPV NNAWAYATNFVPGK
Sbjct: 236 KGPIENLSDHINDPVANNAWAYATNFVPGK 265
>gi|29123378|gb|AAO62942.1| chlorophyll a/b binding protein [Nicotiana tabacum]
Length = 265
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/270 (78%), Positives = 232/270 (85%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+FVG+ V A S NEL GGR +MR+T KS S WYG DR
Sbjct: 1 MATSAIQ-QSAFVGQTV--AKSQNELVRKIGSFGGGRATMRRT-VKSAPQ-SIWYGEDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYR
Sbjct: 116 EILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGLIEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL D + DPV NNAWA+ATNFVPGK
Sbjct: 236 KGPIENLFDQINDPVANNAWAFATNFVPGK 265
>gi|90288037|gb|ABD92879.1| chloroplast chlorophyll a/b binding protein [Pachysandra
terminalis]
Length = 264
Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/269 (79%), Positives = 228/269 (84%), Gaps = 10/269 (3%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN-----GGRISMRKTGSKSVSSGSPWYGPDRVK 55
MATS + S+ G+ NEL GGRISM +T KS S WYGPDR K
Sbjct: 1 MATSALQ-QSALAGRTA--LKQQNELVKKVGVFGGRISMHRT-VKSTPQ-SIWYGPDRPK 55
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE
Sbjct: 56 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG +EGYR+
Sbjct: 116 ILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRV 175
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 176 GGGPLGEGLDSIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DHLAD NNAWAYATNFVPGK
Sbjct: 236 GPIENLFDHLADLAANNAWAYATNFVPGK 264
>gi|168003213|ref|XP_001754307.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694409|gb|EDQ80757.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/269 (80%), Positives = 235/269 (87%), Gaps = 7/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG-----GRISMRKTGSKSVSSGSPWYGPDRVK 55
MA +T S++ G+++ L P NELS R+SMRK+ SKS +S S WYG DR K
Sbjct: 1 MAAATAMHSTALAGQSL-LKPV-NELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPK 58
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFSGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGCV PE
Sbjct: 59 YLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPE 118
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA++GVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+
Sbjct: 119 LLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRV 178
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLG+VTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 179 AGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 238
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GPLENL DHLADPV NNAWAYATNFVPG
Sbjct: 239 GPLENLNDHLADPVANNAWAYATNFVPGN 267
>gi|168045248|ref|XP_001775090.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168045296|ref|XP_001775114.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673541|gb|EDQ60062.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673565|gb|EDQ60086.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/246 (84%), Positives = 220/246 (89%), Gaps = 9/246 (3%)
Query: 24 NELS-----NGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGW 78
NELS N R++MRK S S S WYG DR K+LGPFSGE PSYL GEF GDYGW
Sbjct: 22 NELSRRVGANEARVTMRK----SAGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGDYGW 77
Query: 79 DTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFS 138
DTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA++GVKFGEAVWFKAGAQIFS
Sbjct: 78 DTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFS 137
Query: 139 EGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGL 198
EGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGL
Sbjct: 138 EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGL 197
Query: 199 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT 258
ADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHLADPV NNAWAYAT
Sbjct: 198 ADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYAT 257
Query: 259 NFVPGK 264
NFVPG
Sbjct: 258 NFVPGN 263
>gi|449453598|ref|XP_004144543.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic-like
[Cucumis sativus]
gi|449511798|ref|XP_004164056.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic-like
[Cucumis sativus]
Length = 265
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/270 (78%), Positives = 230/270 (85%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F G+ NEL G R +MR+T KS S WYGPDR
Sbjct: 1 MATSAIQ-QSAFAGQTA--LKQSNELVRKVGALGGARFTMRRT-VKSAPQ-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
ELLA+NGVKFGE+VWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG VEGYR
Sbjct: 116 ELLAKNGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 236 KGPIENLFDHVADPVANNAWAYATNFVPGK 265
>gi|195618248|gb|ACG30954.1| chlorophyll a-b binding protein [Zea mays]
Length = 260
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/264 (78%), Positives = 231/264 (87%), Gaps = 4/264 (1%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
MA S + ++SF+G+A+ +G + G RI+MR+T KSV S WYGPDR KYLGPF
Sbjct: 1 MAASALHQTTSFLGQALVARAAG--VDAGDRITMRRT-VKSVPQ-SIWYGPDRPKYLGPF 56
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+LA+N
Sbjct: 57 SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILAKN 116
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL 180
GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ GGPL
Sbjct: 117 GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPL 176
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
GE D +YPGG+FDPLGLADDP+ AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+EN
Sbjct: 177 GEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 236
Query: 241 LADHLADPVNNNAWAYATNFVPGK 264
L DH+ADPV NNAWAYATNFVPG
Sbjct: 237 LFDHVADPVANNAWAYATNFVPGN 260
>gi|67772801|gb|AAY81729.1| chloroplast putative light harvesting chlorophyll a/b binding
protein, partial [Pinus gerardiana]
Length = 253
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/243 (85%), Positives = 221/243 (90%), Gaps = 10/243 (4%)
Query: 14 GKAVNLAPSGNELSNGG-------RISMRKTGSK---SVSSGSPWYGPDRVKYLGPFSGE 63
G+ +L P N+L G R++MRK+ +K + +S SPWYGPDRV YLGPFSGE
Sbjct: 11 GQLSSLKPHTNQLLGVGAGIHGESRVTMRKSATKKSFASASPSPWYGPDRVLYLGPFSGE 70
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK
Sbjct: 71 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 130
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 183
FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGPLGEV
Sbjct: 131 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEV 190
Query: 184 TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 243
TDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLAD
Sbjct: 191 TDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLAD 250
Query: 244 HLA 246
HLA
Sbjct: 251 HLA 253
>gi|224131818|ref|XP_002321186.1| light-harvesting complex II protein Lhcb2 [Populus trichocarpa]
gi|222861959|gb|EEE99501.1| light-harvesting complex II protein Lhcb2 [Populus trichocarpa]
Length = 265
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/270 (78%), Positives = 231/270 (85%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL------SNGGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F G+ NEL S GRI+MR+T KS S WYGPDR
Sbjct: 1 MATSAIQ-QSAFAGQTA--LKQSNELVRKVGSSGDGRITMRRT-VKSAPQ-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+LA+NGVKFGE+VWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR
Sbjct: 116 EILAKNGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAI+TG
Sbjct: 176 VGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIITG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 236 KGPIENLLDHLADPVANNAWAYATNFVPGK 265
>gi|116782415|gb|ABK22497.1| unknown [Picea sitchensis]
gi|116786586|gb|ABK24164.1| unknown [Picea sitchensis]
gi|116791880|gb|ABK26145.1| unknown [Picea sitchensis]
gi|148908679|gb|ABR17447.1| unknown [Picea sitchensis]
gi|148909254|gb|ABR17727.1| unknown [Picea sitchensis]
gi|224284476|gb|ACN39972.1| unknown [Picea sitchensis]
gi|224285327|gb|ACN40388.1| unknown [Picea sitchensis]
Length = 266
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/251 (82%), Positives = 220/251 (87%), Gaps = 7/251 (2%)
Query: 19 LAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 73
L P NEL + RI+MR+T + S WYGPDR KYLGPFS + PSYLTGEFP
Sbjct: 18 LRPQHNELVRKVGMSQARITMRRTVRSAPES--IWYGPDRPKYLGPFSEQTPSYLTGEFP 75
Query: 74 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 133
GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+ GVKFGEAVWFKAG
Sbjct: 76 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKTGVKFGEAVWFKAG 135
Query: 134 AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSF 193
AQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG +EGYR+ GGPLGE DPLYPGG+F
Sbjct: 136 AQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAF 195
Query: 194 DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
DPLGLADDPE+FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLADP NNA
Sbjct: 196 DPLGLADDPESFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPTANNA 255
Query: 254 WAYATNFVPGK 264
WAYATNFVPGK
Sbjct: 256 WAYATNFVPGK 266
>gi|53627212|gb|AAU89257.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus flexilis]
gi|53627214|gb|AAU89258.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus lambertiana]
gi|53627216|gb|AAU89259.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus monticola]
gi|53627218|gb|AAU89260.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus strobus]
Length = 256
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/252 (83%), Positives = 226/252 (89%), Gaps = 11/252 (4%)
Query: 9 SSSFVGKAVNL-APSGNELSNGG-------RISMRKTGSK---SVSSGSPWYGPDRVKYL 57
S +F G ++L P N+L G R++MRK+ +K + +S SPWYGPDRV YL
Sbjct: 5 SCAFAGGKISLLKPHTNQLLGVGAGVHGESRVTMRKSAAKKSFASASPSPWYGPDRVLYL 64
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 65 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 124
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
A+NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 125 AKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAG 184
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 185 GPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 244
Query: 238 LENLADHLADPV 249
+ENLADHLADPV
Sbjct: 245 IENLADHLADPV 256
>gi|115802|sp|P27494.1|CB23_TOBAC RecName: Full=Chlorophyll a-b binding protein 36, chloroplastic;
AltName: Full=LHCII type I CAB-36; Short=LHCP; Flags:
Precursor
gi|19827|emb|CAA41188.1| chlorophyll a/b binding protein [Nicotiana tabacum]
Length = 265
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/270 (78%), Positives = 231/270 (85%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELS------NGGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F G+ S NEL NGGR +MR+T KS S WYG DR
Sbjct: 1 MATSAIE-QSAFAGQTA--LKSQNELVRKIGSFNGGRATMRRT-VKSAPQ-SIWYGEDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILA+WA QVVLMG +EGYR
Sbjct: 116 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 236 KGPIENLFDHVADPVANNAWAYATNFVPGK 265
>gi|115453971|ref|NP_001050586.1| Os03g0592500 [Oryza sativa Japonica Group]
gi|122246902|sp|Q10HD0.1|CB23_ORYSJ RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|152013384|sp|A2XJ35.1|CB23_ORYSI RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|50839002|gb|AAT81763.1| chlorophyll a/b binding protein [Oryza sativa Japonica Group]
gi|108709618|gb|ABF97413.1| Chlorophyll a-b binding protein, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
gi|113549057|dbj|BAF12500.1| Os03g0592500 [Oryza sativa Japonica Group]
gi|125544706|gb|EAY90845.1| hypothetical protein OsI_12453 [Oryza sativa Indica Group]
gi|125586998|gb|EAZ27662.1| hypothetical protein OsJ_11611 [Oryza sativa Japonica Group]
gi|385718838|gb|AFI71846.1| chlorophyll a/b binbing protein [Oryza sativa]
Length = 263
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/269 (78%), Positives = 232/269 (86%), Gaps = 11/269 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MA S + ++SF+G A P +EL +GGRI+MR+T KS S WYGPDR K
Sbjct: 1 MAASALHQTTSFLGTA----PRRDELVRRVGDSGGRITMRRT-VKSAPQ-SIWYGPDRPK 54
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE
Sbjct: 55 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 114
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR+
Sbjct: 115 ILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRV 174
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 175 GGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 234
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 235 GPIENLFDHVADPVANNAWAYATNFVPGK 263
>gi|56122690|gb|AAV74408.1| chloroplast chlorophyll A/B binding protein [Manihot esculenta]
Length = 243
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/238 (86%), Positives = 218/238 (91%), Gaps = 6/238 (2%)
Query: 29 GGRISMRKTGSKSVSSGSP--WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 86
GGR SMR+T V S P WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSAD
Sbjct: 10 GGRFSMRRT----VKSAPPSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 65
Query: 87 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG 146
PETFAKNRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG
Sbjct: 66 PETFAKNRELEVIHCRWAMLGALGCVFPEVLSKNGVKFGEAVWFKAGAQIFSEGGLDYLG 125
Query: 147 NPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFA 206
NP+LIHAQSILAIWA QVVLMG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDP+AFA
Sbjct: 126 NPNLIHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFA 185
Query: 207 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 186 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVPGK 243
>gi|298573438|gb|ADI88502.1| protoporphyrin IX magnesium chelatase [Pteris vittata]
Length = 266
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/248 (83%), Positives = 220/248 (88%), Gaps = 6/248 (2%)
Query: 22 SGNELSNG-----GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDY 76
S NELS R+ M K+ +SGS WYG DR YLGPFSG PPSYLTGEFPGDY
Sbjct: 20 SVNELSRKVGAGEARVQMMAP-KKASTSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDY 78
Query: 77 GWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQI 136
GWDTAGLSADPETFAKNRELE+IH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG+QI
Sbjct: 79 GWDTAGLSADPETFAKNRELELIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQI 138
Query: 137 FSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPL 196
F+EGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPL
Sbjct: 139 FAEGGLDYLGNPSLVHAQSILAIWAFQVVLMGAVEGYRVAGGPLGEVEDPLYPGGSFDPL 198
Query: 197 GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAY 256
GLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP NNAWAY
Sbjct: 199 GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAY 258
Query: 257 ATNFVPGK 264
ATNF PGK
Sbjct: 259 ATNFTPGK 266
>gi|15232249|ref|NP_189406.1| photosystem II light harvesting complex protein 2.3 [Arabidopsis
thaliana]
gi|4741950|gb|AAD28772.1|AF134125_1 Lhcb2 protein [Arabidopsis thaliana]
gi|13899125|gb|AAK48984.1|AF370557_1 light harvesting chlorophyll a/b-binding protein [Arabidopsis
thaliana]
gi|9294474|dbj|BAB02693.1| light harvesting chlorophyll a/b-binding protein [Arabidopsis
thaliana]
gi|30023746|gb|AAP13406.1| At3g27700 [Arabidopsis thaliana]
gi|332643831|gb|AEE77352.1| photosystem II light harvesting complex protein 2.3 [Arabidopsis
thaliana]
Length = 266
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/270 (78%), Positives = 229/270 (84%), Gaps = 10/270 (3%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + SSF G+ L PS + L GGRI MR+T + S WYGPDR
Sbjct: 1 MATSAIQ-HSSFAGQ-TTLKPSNDLLRKIGASNGGGRIIMRRTVKSTPQS--IWYGPDRP 56
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS PSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC FP
Sbjct: 57 KYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFP 116
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG +EGYR
Sbjct: 117 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYR 176
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
I GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 177 IGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTG 236
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 237 KGPIENLFDHIADPVANNAWAYATNFVPGK 266
>gi|373882292|gb|AEY78525.1| chlorophyll a/b-binding protein [Tagetes erecta]
Length = 265
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/270 (79%), Positives = 231/270 (85%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELS------NGGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F G A L P NEL GGR +MR+T KS S WYGPDR
Sbjct: 1 MATSAIQ-QSAFAGSAA-LKPQ-NELVKKTGSFTGGRFTMRRT-VKSAPQ-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG +EGYR
Sbjct: 116 EVLSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE D +YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DHL+DPV NNAWAYATNFVPGK
Sbjct: 236 KGPIENLFDHLSDPVANNAWAYATNFVPGK 265
>gi|126362926|gb|ABO10493.1| light-harvesting chlorophyll a/b binding protein [Bambusa oldhamii]
Length = 263
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/269 (78%), Positives = 231/269 (85%), Gaps = 11/269 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN-----GGRISMRKTGSKSVSSGSPWYGPDRVK 55
MA S + ++SF+G A P +EL GGRI+MR+T KS S WYGPDR K
Sbjct: 1 MAASALHQTTSFLGTA----PRRDELVRHVGDFGGRITMRRT-VKSAPQ-SIWYGPDRPK 54
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NREL VIH RWAMLGALGCVFPE
Sbjct: 55 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELGVIHSRWAMLGALGCVFPE 114
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRI
Sbjct: 115 ILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRI 174
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 175 GGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 234
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DH+ADPVNNNAWAYATNFVPGK
Sbjct: 235 GPIENLFDHVADPVNNNAWAYATNFVPGK 263
>gi|4741948|gb|AAD28771.1|AF134124_1 Lhcb2 protein [Arabidopsis thaliana]
Length = 265
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/270 (78%), Positives = 231/270 (85%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL------SNGGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + SSF G+ L PS NEL S GGR++MR+T + S WYGPDR
Sbjct: 1 MATSAIQ-QSSFAGQTA-LKPS-NELLRKVGVSGGGRVTMRRTVKSTPQS--IWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS PSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC FP
Sbjct: 56 KYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG +EGYR
Sbjct: 116 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
I GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 IGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DHLADPV NNAW+YATNFVPGK
Sbjct: 236 KGPIENLFDHLADPVANNAWSYATNFVPGK 265
>gi|297835814|ref|XP_002885789.1| Lhcb2 protein [Arabidopsis lyrata subsp. lyrata]
gi|297331629|gb|EFH62048.1| Lhcb2 protein [Arabidopsis lyrata subsp. lyrata]
Length = 265
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/269 (78%), Positives = 230/269 (85%), Gaps = 9/269 (3%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MATS + SSF G+ L PS + L S GGR++MR+T + S WYGPDR K
Sbjct: 1 MATSAIQ-QSSFAGQTA-LKPSNDLLRKAGVSGGGRVTMRRTVKSTPQS--IWYGPDRPK 56
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS PSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC FPE
Sbjct: 57 YLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPE 116
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG +EGYRI
Sbjct: 117 ILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRI 176
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 177 GGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGK 236
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DHLADPV NNAW+YATNFVPGK
Sbjct: 237 GPIENLFDHLADPVANNAWSYATNFVPGK 265
>gi|126566046|gb|ABO20852.1| chlorophyll a/b binding protein of LHCII type I [Lilium
longiflorum]
Length = 264
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/269 (79%), Positives = 230/269 (85%), Gaps = 10/269 (3%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN-----GGRISMRKTGSKSVSSGSPWYGPDRVK 55
MATS + S+F G+ + +EL GGR+SMR+T KS S WYG DR K
Sbjct: 1 MATSAIQ-QSAFTGQTA--LKNRDELVRKVGVVGGRVSMRRT-VKSAPQ-SIWYGADRPK 55
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 56 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 115
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LL++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYRI
Sbjct: 116 LLSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFIEGYRI 175
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE DPLYPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 176 GGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 235
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 236 GPVENLYDHLADPATNNAWAYATNFVPGK 264
>gi|53627210|gb|AAU89256.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus chiapensis]
Length = 256
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/252 (82%), Positives = 226/252 (89%), Gaps = 11/252 (4%)
Query: 9 SSSFVGKAVNL-APSGNELSNGG-------RISMRKTGSK---SVSSGSPWYGPDRVKYL 57
S +F G ++L P N+L G R++MRK+ +K + +S SPWYGPDRV YL
Sbjct: 5 SCAFAGGKISLLKPHTNQLLGVGAGVHGESRVTMRKSAAKKSFASASPSPWYGPDRVLYL 64
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 65 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 124
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
A+NGVKFGEAVWFKAGAQIFSEGGLD+LGNPSLIHAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 125 AKNGVKFGEAVWFKAGAQIFSEGGLDHLGNPSLIHAQSILAIWACQVILMGAVEGYRIAG 184
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 185 GPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 244
Query: 238 LENLADHLADPV 249
+ENLADHLADPV
Sbjct: 245 IENLADHLADPV 256
>gi|365268967|gb|AEW70716.1| light harvesting chlorophyll a-b binding protein 2-1 [Phyllostachys
edulis]
Length = 263
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/269 (78%), Positives = 231/269 (85%), Gaps = 11/269 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN-----GGRISMRKTGSKSVSSGSPWYGPDRVK 55
MA S + ++SF+G A P +EL GGRI+MR+T KS S WYGPDR K
Sbjct: 1 MAASALHQTTSFLGAA----PRRDELVRRVGDFGGRITMRRT-VKSAPQ-SIWYGPDRPK 54
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEF GDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE
Sbjct: 55 YLGPFSEQTPSYLTGEFAGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 114
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR+
Sbjct: 115 ILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRV 174
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 175 GGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 234
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DH+ADPVNNNAWAYATNFVPGK
Sbjct: 235 GPIENLFDHVADPVNNNAWAYATNFVPGK 263
>gi|374412428|gb|AEZ49172.1| chlorophyll a/b binding protein of LHCII type I [Wolffia
australiana]
Length = 264
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/234 (85%), Positives = 216/234 (92%), Gaps = 2/234 (0%)
Query: 30 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 89
GR+SMR+T + S WYGPDR K+LGPFS + PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 32 GRVSMRRT--VKAAPQSIWYGPDRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 89
Query: 90 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 149
FAKNRELEVIH RWAMLGALGC+FPELL++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+
Sbjct: 90 FAKNRELEVIHARWAMLGALGCIFPELLSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPN 149
Query: 150 LIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELK 209
LIHAQSILAIWA QVVLMG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELK
Sbjct: 150 LIHAQSILAIWATQVVLMGFIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELK 209
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL+DHLADPV NNAW+YATNFVPG
Sbjct: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLSDHLADPVANNAWSYATNFVPG 263
>gi|3126854|gb|AAC15992.1| chlorophyll a/b binding protein [Oryza sativa Japonica Group]
Length = 263
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/269 (77%), Positives = 231/269 (85%), Gaps = 11/269 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MA S + ++SF+G A P +EL +GGRI+MR+T KS S WYGPDR K
Sbjct: 1 MAASALHQTTSFLGTA----PRRDELVRRVGDSGGRITMRRT-VKSAPQ-SIWYGPDRPK 54
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE
Sbjct: 55 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 114
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR+
Sbjct: 115 ILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRV 174
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE D +YP G+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 175 GGGPLGEGLDKVYPSGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 234
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 235 GPIENLFDHVADPVANNAWAYATNFVPGK 263
>gi|224064850|ref|XP_002301582.1| light-harvesting complex II protein Lhcb2 [Populus trichocarpa]
gi|118486872|gb|ABK95270.1| unknown [Populus trichocarpa]
gi|118488008|gb|ABK95825.1| unknown [Populus trichocarpa]
gi|222843308|gb|EEE80855.1| light-harvesting complex II protein Lhcb2 [Populus trichocarpa]
Length = 265
Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/270 (78%), Positives = 231/270 (85%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRV 54
MA S + S+F G+ P N+L GGR++MR+T KS S WYGPDR
Sbjct: 1 MAASAIQ-QSAFAGQTALKQP--NDLVRKVGSFGGGRVTMRRT-VKSAPQ-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
K+LGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP
Sbjct: 56 KFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+LA+NGVKFGE+VWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR
Sbjct: 116 EILAKNGVKFGESVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 236 KGPVENLLDHLADPVANNAWAYATNFVPGK 265
>gi|5714656|gb|AAD48017.1|AF165529_1 chlorophyll a/b binding protein [Rumex palustris]
Length = 264
Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/269 (78%), Positives = 229/269 (85%), Gaps = 10/269 (3%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MA S + S+ + L P NEL NGGR MR+T KS S WYGPDR K
Sbjct: 1 MAASGIQFSA--IAGQTALKPQ-NELVRKVGGNGGRFFMRRT-VKSAPQ-SIWYGPDRPK 55
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE
Sbjct: 56 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 115
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LL++NGV+FGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+
Sbjct: 116 LLSKNGVQFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRV 175
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE D LYPGG+FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 176 GGGPLGEDLDKLYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 235
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 236 GPVENLVDHIADPVANNAWAYATNFVPGK 264
>gi|340002459|gb|AEK26372.1| chloroplast photosystem II chlorophyll a/b binding protein [Sedum
alfredii]
Length = 265
Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/270 (78%), Positives = 230/270 (85%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELS------NGGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + SS+F G+ NEL +GGR +MR+T KS S WYG DR
Sbjct: 1 MATSAIQ-SSAFAGQTS--LKQQNELVRKVGNFSGGRATMRRT-VKSTPQ-SIWYGADRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR
Sbjct: 116 EILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGLIEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE D +YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 236 KGPVENLFDHLADPVANNAWAYATNFVPGK 265
>gi|386784577|gb|AFJ25031.1| chlorophyll a/b binding protein [Lonicera japonica]
Length = 265
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/268 (79%), Positives = 228/268 (85%), Gaps = 7/268 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN--GGRISMRKTGSKSVSSG--SPWYGPDRVKY 56
MATS + S+F G+ V NEL G S R T ++V S S WYGPDR KY
Sbjct: 1 MATSAIQ-HSAFAGQTV--LKQQNELVRKVGSFGSSRTTMRRTVKSTPQSIWYGPDRPKY 57
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+
Sbjct: 58 LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEI 117
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
LA+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYRI
Sbjct: 118 LAKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGLIEGYRIG 177
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
GGPLGE D LYPGG+FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEGLDSLYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264
P+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 238 PVENLYDHLADPVANNAWAYATNFVPGK 265
>gi|53627228|gb|AAU89265.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Picea sitchensis]
Length = 253
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/249 (83%), Positives = 222/249 (89%), Gaps = 11/249 (4%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYL 57
S +F G ++ L P N+L G R++MRK+ +K VS S SPWYGPDRV YL
Sbjct: 5 SCAFAGGQISSLKPHNNQLVGVGAGVHGEARVTMRKSSTKKVSASASTSPWYGPDRVLYL 64
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 65 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 124
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 125 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 184
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+TDP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFF QAIVTGKGP
Sbjct: 185 GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFXQAIVTGKGP 244
Query: 238 LENLADHLA 246
+ENLADHLA
Sbjct: 245 IENLADHLA 253
>gi|397789256|gb|AFO67217.1| putative chlorophyll a/b binding protein [Aralia elata]
Length = 265
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/270 (80%), Positives = 230/270 (85%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F G+ L P NEL GG I+MR+T KS S WYGPDR
Sbjct: 1 MATSAIQ-QSAFAGQTA-LKPQ-NELVRKVGSFGGGHITMRRT-VKSAPE-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+LA+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR
Sbjct: 116 EILAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLG D +YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGWGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 236 KGPIENLYDHLADPVANNAWAYATNFVPGK 265
>gi|413968458|gb|AFW90566.1| chlorophyll a/b-binding protein [Solanum tuberosum]
Length = 271
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/268 (77%), Positives = 228/268 (85%), Gaps = 11/268 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG------GRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+FVG+AV S NE RI+MR+T + S WYG DR
Sbjct: 1 MATSAIQ-QSAFVGQAV--GKSQNEFVRKVGSCGESRITMRRTVKSAPQS--IWYGEDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSY TGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYSTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR
Sbjct: 116 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVP 262
KGP+ENL+DH+ DPV NNAWAYATNFVP
Sbjct: 236 KGPIENLSDHINDPVANNAWAYATNFVP 263
>gi|4741944|gb|AAD28769.1|AF134122_1 Lhcb2 protein [Arabidopsis thaliana]
Length = 265
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/270 (78%), Positives = 231/270 (85%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL------SNGGRISMRKTGSKSVSSGSPWYGPDRV 54
M TS + SSF G+ L PS NEL S GGR++MR+T KS S WYGPDR
Sbjct: 1 MGTSAIQ-QSSFAGQTA-LKPS-NELLRKVGVSGGGRVTMRRT-VKSTPQ-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS PSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC FP
Sbjct: 56 KYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG +EGYR
Sbjct: 116 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
I GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 IGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DHLADPV NNAW+YATNFVPGK
Sbjct: 236 KGPIENLFDHLADPVANNAWSYATNFVPGK 265
>gi|15224465|ref|NP_178582.1| photosystem II light harvesting complex protein 2.2 [Arabidopsis
thaliana]
gi|4741946|gb|AAD28770.1|AF134123_1 Lhcb2 protein [Arabidopsis thaliana]
gi|4585935|gb|AAD25595.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|15809901|gb|AAL06878.1| At2g05070/F1O13.20 [Arabidopsis thaliana]
gi|17064974|gb|AAL32641.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|17978863|gb|AAL47403.1| At2g05070/F1O13.20 [Arabidopsis thaliana]
gi|20260048|gb|AAM13371.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|330250799|gb|AEC05893.1| photosystem II light harvesting complex protein 2.2 [Arabidopsis
thaliana]
Length = 265
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/269 (77%), Positives = 229/269 (85%), Gaps = 9/269 (3%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN-----GGRISMRKTGSKSVSSGSPWYGPDRVK 55
MATS + SSF G+ L PS + + GGR++MR+T + S WYGPDR K
Sbjct: 1 MATSAIQ-QSSFAGQTA-LKPSSDLIQKVGVLGGGRVTMRRTVKSTPQS--IWYGPDRPK 56
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS PSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC FPE
Sbjct: 57 YLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPE 116
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG +EGYRI
Sbjct: 117 ILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRI 176
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 177 GGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGK 236
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DHLADPV NNAW+YATNFVPGK
Sbjct: 237 GPIENLFDHLADPVANNAWSYATNFVPGK 265
>gi|15224471|ref|NP_178585.1| photosystem II light harvesting complex protein 2.1 [Arabidopsis
thaliana]
gi|4874296|gb|AAD31358.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|15450349|gb|AAK96468.1| At2g05100/F15L11.2 [Arabidopsis thaliana]
gi|15450494|gb|AAK96540.1| At2g05100/F15L11.2 [Arabidopsis thaliana]
gi|25054901|gb|AAN71932.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|330250800|gb|AEC05894.1| photosystem II light harvesting complex protein 2.1 [Arabidopsis
thaliana]
Length = 265
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/270 (78%), Positives = 230/270 (85%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL------SNGGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + SSF G+ L PS NEL S GGR++MR+T + S WYGPDR
Sbjct: 1 MATSAIQ-QSSFAGQTA-LKPS-NELLRKVGVSGGGRVTMRRTVKSTPQS--IWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS PSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC FP
Sbjct: 56 KYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG +EGYR
Sbjct: 116 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
I GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 IGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DHLADPV NNAW+YATNFVPG
Sbjct: 236 KGPIENLFDHLADPVANNAWSYATNFVPGN 265
>gi|297815030|ref|XP_002875398.1| LHCB2:4 [Arabidopsis lyrata subsp. lyrata]
gi|297321236|gb|EFH51657.1| LHCB2:4 [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/270 (77%), Positives = 229/270 (84%), Gaps = 10/270 (3%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + SS F G+ L PS + L GGR+ MR+T + S WYGPDR
Sbjct: 1 MATSAIQYSS-FTGQTA-LKPSNDLLRKVGASNGGGRVIMRRTVKSTPQS--IWYGPDRP 56
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS PSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC FP
Sbjct: 57 KYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFP 116
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGVKFGEAVWFKAG+QIFSEGGLDYLG+P+LIHAQSILAIWACQVVLMG +EGYR
Sbjct: 117 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGSPNLIHAQSILAIWACQVVLMGFIEGYR 176
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
I GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 177 IGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTG 236
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 237 KGPIENLFDHIADPVANNAWAYATNFVPGK 266
>gi|115770|sp|P12328.1|CB21_LEMGI RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|168290|gb|AAA33392.1| chlorophyll a/b apoprotein [Lemna gibba]
Length = 264
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/235 (85%), Positives = 217/235 (92%), Gaps = 2/235 (0%)
Query: 30 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 89
GR SMR+T K+V S WYG DR K+LGPFS + PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 32 GRFSMRRT-VKAVPQ-SIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 89
Query: 90 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 149
FAKNRELEVIH RWAMLGALGC+FPELL++NGV+FGEAVWFKAGAQIFSEGGLDYLGNP+
Sbjct: 90 FAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPN 149
Query: 150 LIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELK 209
L+HAQSILAIWA QVVLMG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELK
Sbjct: 150 LVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELK 209
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
VKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADH+ADPV NNAWA+ATNFVPGK
Sbjct: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANNAWAFATNFVPGK 264
>gi|146150144|gb|ABQ02463.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 263
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/269 (77%), Positives = 230/269 (85%), Gaps = 11/269 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN-----GGRISMRKTGSKSVSSGSPWYGPDRVK 55
MA S + ++SF+G A P +EL GGRI+MR+T KS S WYGPDR K
Sbjct: 1 MAASALHQTTSFLGAA----PRRDELVRRVGDFGGRITMRRT-VKSAPQ-SIWYGPDRPK 54
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEF GDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE
Sbjct: 55 YLGPFSEQTPSYLTGEFAGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 114
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR+
Sbjct: 115 ILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRV 174
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNG LAMFSMFGFFVQAIVTGK
Sbjct: 175 GGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGSLAMFSMFGFFVQAIVTGK 234
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DH+ADPVNNNAWAYATNFVPGK
Sbjct: 235 GPIENLFDHVADPVNNNAWAYATNFVPGK 263
>gi|312281813|dbj|BAJ33772.1| unnamed protein product [Thellungiella halophila]
Length = 266
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/270 (77%), Positives = 228/270 (84%), Gaps = 10/270 (3%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + SSF G+ L PS + L GGR+ MR+T + S WYGPDR
Sbjct: 1 MATSAIQ-HSSFAGQTA-LKPSNDLLRKVGASNGGGRVVMRRTVKSTPQS--IWYGPDRP 56
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS PSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC FP
Sbjct: 57 KYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFP 116
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG +EGYR
Sbjct: 117 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYR 176
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
I GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 177 IGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTG 236
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DHLADPV NNAW+YATNFVPGK
Sbjct: 237 KGPIENLFDHLADPVANNAWSYATNFVPGK 266
>gi|110224742|emb|CAL07971.1| chlorophyll a/b-binding protein, photosystem II [Platanus x
acerifolia]
Length = 235
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/217 (93%), Positives = 210/217 (96%), Gaps = 1/217 (0%)
Query: 46 SPW-YGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
S W +G +R YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA
Sbjct: 19 STWCFGFERYGYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 78
Query: 105 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV 164
MLGALGCVFPELL+RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWA QV
Sbjct: 79 MLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQV 138
Query: 165 VLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
+LMGAVEGYR+AGGPLG+VT PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF
Sbjct: 139 ILMGAVEGYRVAGGPLGKVTGPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 198
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV 261
GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV
Sbjct: 199 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV 235
>gi|115811|sp|P12062.1|CB26_PETSP RecName: Full=Chlorophyll a-b binding protein 37, chloroplastic;
AltName: Full=LHCII type I CAB-37; Short=LHCP; Flags:
Precursor
gi|20512|emb|CAA28639.1| chlorophyll a/b binding protein [Petunia x hybrida]
Length = 265
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/270 (78%), Positives = 229/270 (84%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F G+ S NEL GGR +MR+T KS S WYG DR
Sbjct: 1 MATSAIQ-QSAFAGQTA--LKSQNELVRKIGSFGGGRATMRRT-VKSAPQ-SIWYGEDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGV FGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR
Sbjct: 116 EILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 236 KGPIENLYDHVADPVANNAWAFATNFVPGK 265
>gi|118489455|gb|ABK96530.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 265
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/270 (78%), Positives = 230/270 (85%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRV 54
MA S + S+F G+ P N+L GGR++MR+T KS S WYGPDR
Sbjct: 1 MAASAIQ-QSAFAGQTALKQP--NDLVRKVGSFGGGRVTMRRT-VKSAPQ-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
K+LGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP
Sbjct: 56 KFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+LA+NGVKFGE+VWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR
Sbjct: 116 EILAKNGVKFGESVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLA FSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLATFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 236 KGPVENLLDHLADPVANNAWAYATNFVPGK 265
>gi|297815028|ref|XP_002875397.1| LHCB2:4 [Arabidopsis lyrata subsp. lyrata]
gi|297321235|gb|EFH51656.1| LHCB2:4 [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/270 (77%), Positives = 228/270 (84%), Gaps = 10/270 (3%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + SSF G+ L PS + + GGR+ MR+T + S WYGPDR
Sbjct: 1 MATSAIQ-HSSFAGQTA-LKPSNDLIRKVGASNGGGRVVMRRTVKSTPQS--IWYGPDRP 56
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS PSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC FP
Sbjct: 57 KYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFP 116
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG +EGYR
Sbjct: 117 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYR 176
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
I GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMF MFGFFVQAIVTG
Sbjct: 177 IGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFPMFGFFVQAIVTG 236
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 237 KGPIENLFDHIADPVANNAWAYATNFVPGK 266
>gi|511153|emb|CAA84525.1| chlorophyll a,b binding protein type I [Solanum tuberosum]
Length = 265
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/270 (77%), Positives = 229/270 (84%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F G+ S NE GGR++MR+T KS S WYG DR
Sbjct: 1 MATSAIQ-QSAFAGQTA--LKSQNEFIRKIGSFEGGRVTMRRT-VKSAPQ-SIWYGEDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+N ELEVIHCRWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNLELEVIHCRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGV FGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR
Sbjct: 116 EILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL+DH+ADPV NNAWAYATNFVPGK
Sbjct: 236 KGPIENLSDHIADPVANNAWAYATNFVPGK 265
>gi|1006704|emb|CAA89823.1| light-harvesting chlorophyll a/b binding protein of photosystem II
[Pseudotsuga menziesii]
Length = 234
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/234 (86%), Positives = 214/234 (91%), Gaps = 2/234 (0%)
Query: 31 RISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF 90
RI+MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 3 RITMRRTVRSAPES--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 60
Query: 91 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 150
AKNRELEVIH RWAMLGALGCVFPELLA+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L
Sbjct: 61 AKNRELEVIHSRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL 120
Query: 151 IHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKV 210
IHAQSILAIWA QVVLMG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKV
Sbjct: 121 IHAQSILAIWAFQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKV 180
Query: 211 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 181 KELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 234
>gi|3560529|gb|AAC34983.1| light harvesting chlorophyll A/B binding protein [Prunus persica]
Length = 265
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/270 (78%), Positives = 229/270 (84%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F G+ NEL GGRI+MR+T KS S WYGPDR
Sbjct: 1 MATSAIQ-QSAFAGQTA--LKQSNELIRKIGGLGGGRITMRRT-VKSTPQ-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN ELEVIH RWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNGELEVIHSRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR
Sbjct: 116 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKE+KNGRLAM SMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMTSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 236 KGPVENLYDHVADPVANNAWAYATNFVPGK 265
>gi|346987813|gb|AEO51757.1| chloroplast chlorophyll A/B binding protein [Dimocarpus longan]
Length = 265
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/271 (79%), Positives = 234/271 (86%), Gaps = 13/271 (4%)
Query: 1 MATSTMALSSSFVGK-AVNLAPSGNELSNG------GRISMRKTGSKSVSSGSPWYGPDR 53
MAT+ + SSF G+ ++NL+ NE GRI+MR+T KSV + S WYGPDR
Sbjct: 1 MATTALQ-HSSFAGQTSLNLS---NEFIRKVGSFGEGRITMRRT-VKSVPA-SIWYGPDR 54
Query: 54 VKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF 113
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF
Sbjct: 55 PKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF 114
Query: 114 PELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGY 173
PE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGY
Sbjct: 115 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGY 174
Query: 174 RIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 233
RI GGPLGE DPLYPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIV
Sbjct: 175 RIGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVP 234
Query: 234 GKGPLENLADHLADPVNNNAWAYATNFVPGK 264
GKGP+ENL+D LA PV NNAWAYA NFVPGK
Sbjct: 235 GKGPIENLSDPLAAPVANNAWAYAPNFVPGK 265
>gi|209868185|gb|ACI90632.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus tabuliformis var. henryi]
gi|209868187|gb|ACI90633.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus hwangshanensis]
gi|209868189|gb|ACI90634.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus tabuliformis]
Length = 254
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/245 (84%), Positives = 219/245 (89%), Gaps = 11/245 (4%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYL 57
S +F G ++ L P N+L G R++MRK +K VS S SPWYGPDRV YL
Sbjct: 10 SCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKVSASASTSPWYGPDRVLYL 69
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 70 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 129
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 130 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 189
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 190 GPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 249
Query: 238 LENLA 242
+ENLA
Sbjct: 250 IENLA 254
>gi|227612|prf||1707316B chlorophyll a/b binding protein 2
Length = 263
Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/269 (76%), Positives = 230/269 (85%), Gaps = 11/269 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MA S + ++SF+G A P ++L +GGRI+MR+T KS S WYGPDR K
Sbjct: 1 MAASALHQTTSFLGTA----PRRDDLVRRVGDSGGRITMRRT-VKSAPQ-SIWYGPDRPK 54
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE+IH RWAMLGALGCVFPE
Sbjct: 55 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELELIHSRWAMLGALGCVFPE 114
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR+
Sbjct: 115 ILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRV 174
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIV GK
Sbjct: 175 GGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVRGK 234
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DH+ DPV NNAWAYATNFVPGK
Sbjct: 235 GPIENLFDHVTDPVANNAWAYATNFVPGK 263
>gi|388515841|gb|AFK45982.1| unknown [Lotus japonicus]
Length = 265
Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/270 (77%), Positives = 228/270 (84%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG------GRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F G+ GNEL GR +MR+T KS S WYGPDR
Sbjct: 1 MATSAIQ-QSAFTGQTA--LKQGNELLRKAGGFGKGRFTMRRT-VKSAPQ-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC FP
Sbjct: 56 KYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L RNGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG +EGYR
Sbjct: 116 EILERNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQVVLMGLIEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE DPLYPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP++NL DH+ADPV NNAWA+ATNFVPG+
Sbjct: 236 KGPIQNLYDHVADPVANNAWAFATNFVPGQ 265
>gi|357121229|ref|XP_003562323.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Brachypodium distachyon]
Length = 263
Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/268 (76%), Positives = 230/268 (85%), Gaps = 11/268 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN-----GGRISMRKTGSKSVSSGSPWYGPDRVK 55
MA S + ++SF+G A P ++L GGRI+MR+T KS S WYGPDR K
Sbjct: 1 MAASALHQTTSFLGTA----PRRDDLVRSVGDFGGRITMRRT-VKSAPQ-SIWYGPDRPK 54
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 55 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 114
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYR+
Sbjct: 115 ILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFIEGYRV 174
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE D +YPGG+FDPLGLADDP+ AELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 175 GGGPLGEGLDKIYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGFFVQAIVTGK 234
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPG 263
GP+ENL DH+ADPVNNNAWA+ATNF PG
Sbjct: 235 GPVENLFDHVADPVNNNAWAFATNFAPG 262
>gi|163914163|dbj|BAF95850.1| putative chloroplast chlorophyll a/b binding protein [Vitis hybrid
cultivar]
Length = 234
Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/231 (89%), Positives = 215/231 (93%), Gaps = 3/231 (1%)
Query: 6 MALSS-SFVGKAVNLAPSGNELSNGGRISMRKTG--SKSVSSGSPWYGPDRVKYLGPFSG 62
MALSS S GKA LAPS ++L GR++MRKTG +K VSSGSPWYG DRVKYLGPFSG
Sbjct: 4 MALSSPSLAGKAFQLAPSASDLLGEGRVTMRKTGGRAKPVSSGSPWYGTDRVKYLGPFSG 63
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV
Sbjct: 64 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 123
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 182
KFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMGAVEGYRI GGPLGE
Sbjct: 124 KFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVILMGAVEGYRIGGGPLGE 183
Query: 183 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 233
V DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT
Sbjct: 184 VVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 234
>gi|209868183|gb|ACI90631.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus bungeana]
Length = 254
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/252 (82%), Positives = 222/252 (88%), Gaps = 10/252 (3%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGG-------RISMRKTGSK---SVSSGSPWYG 50
MAT + + G+ +L P N+L G R++MRK+ +K + +S SPWYG
Sbjct: 3 MATCGIGSCAFAGGQLSSLKPHTNQLLGVGAGVHGESRVTMRKSATKKSFASASPSPWYG 62
Query: 51 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
PDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG
Sbjct: 63 PDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 122
Query: 111 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 170
CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAV
Sbjct: 123 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAV 182
Query: 171 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
EGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQA
Sbjct: 183 EGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQA 242
Query: 231 IVTGKGPLENLA 242
IVTGKGP+ENLA
Sbjct: 243 IVTGKGPIENLA 254
>gi|218174|dbj|BAA00537.1| type II light-harvesting chlorophyll a/b-binding protein [Oryza
sativa Japonica Group]
Length = 263
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/265 (76%), Positives = 228/265 (86%), Gaps = 3/265 (1%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN-GGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA S + ++SF+G A + + GGRI+MR+T KS S WYGPDR KYLGP
Sbjct: 1 MAASALHQTTSFLGTAPRRDDVVRRVGDSGGRITMRRT-VKSAPQ-SIWYGPDRPKYLGP 58
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELE+IH RWAMLGALGCVFPE+L++
Sbjct: 59 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELELIHSRWAMLGALGCVFPEILSK 118
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR+ GGP
Sbjct: 119 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGP 178
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
LGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+E
Sbjct: 179 LGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 238
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NL DH+ DPV NNAW+YATNFVPGK
Sbjct: 239 NLFDHVTDPVANNAWSYATNFVPGK 263
>gi|115806|sp|P14279.1|CB25_SOLLC RecName: Full=Chlorophyll a-b binding protein 5, chloroplastic;
AltName: Full=LHCII type I CAB-5; Short=LHCP; Flags:
Precursor
gi|170392|gb|AAA34142.1| chlorophyll a/b-binding protein precursor, partial [Solanum
lycopersicum]
Length = 237
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/237 (84%), Positives = 217/237 (91%), Gaps = 2/237 (0%)
Query: 28 NGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 87
GGR++MR+T KS S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 3 EGGRVTMRRT-VKSAPQ-SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 60
Query: 88 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGN 147
ETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAG+QIFSEGGLDYLGN
Sbjct: 61 ETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGN 120
Query: 148 PSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAE 207
P+LIHAQSILAIWA QVVLMG VEGYR+ GGPLGE D +YPGG+FDPLGLADDPEAFAE
Sbjct: 121 PNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAE 180
Query: 208 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
LKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DH+ADPV NNAWAYATNFVPGK
Sbjct: 181 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFVPGK 237
>gi|326511319|dbj|BAJ87673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/242 (85%), Positives = 216/242 (89%), Gaps = 4/242 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTG--SKSVSSGSPWYGPDRVKYL 57
M +TM+LSSS F GKAV PS + R++MRKT +K VSSGSPWYG DRV YL
Sbjct: 1 MVATTMSLSSSSFAGKAVKNLPSPAHIGEA-RVTMRKTAVKAKQVSSGSPWYGSDRVLYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 60 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRIAG 179
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG P
Sbjct: 180 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGGEP 239
Query: 238 LE 239
Sbjct: 240 CR 241
>gi|115784|sp|P08222.1|CB22_CUCSA RecName: Full=Chlorophyll a-b binding protein of LHCII type 1;
AltName: Full=Chlorophyll a-b binding protein of LHCII
type I; Short=CAB; Short=LHCP
gi|167525|gb|AAA33125.1| chlorophyll a/b-binding protein, partial [Cucumis sativus]
Length = 206
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/206 (96%), Positives = 204/206 (99%)
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+
Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGG
Sbjct: 61 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGG 120
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 121 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 180
Query: 239 ENLADHLADPVNNNAWAYATNFVPGK 264
ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 181 ENLADHLADPVNNNAWAYATNFVPGK 206
>gi|209868193|gb|ACI90636.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus massoniana]
Length = 233
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/215 (92%), Positives = 207/215 (96%), Gaps = 3/215 (1%)
Query: 31 RISMRKTGSKSVS---SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 87
R++MRK +K VS S SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP
Sbjct: 19 RVTMRKATTKKVSASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 78
Query: 88 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGN 147
ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGN
Sbjct: 79 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGN 138
Query: 148 PSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAE 207
PSL+HAQSILAIWACQV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAE
Sbjct: 139 PSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAE 198
Query: 208 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 242
LKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLA
Sbjct: 199 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLA 233
>gi|209868191|gb|ACI90635.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus yunnanensis]
Length = 254
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/245 (84%), Positives = 218/245 (88%), Gaps = 11/245 (4%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYL 57
S +F G ++ L P N+L G R++MRK +K VS S SPWYGPDRV YL
Sbjct: 10 SCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKVSASASTSPWYGPDRVLYL 69
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 70 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 129
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 130 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 189
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 190 GPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 249
Query: 238 LENLA 242
+ENLA
Sbjct: 250 IENLA 254
>gi|227138|prf||1615137A chlorophyll a/b binding protein P25
Length = 226
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/219 (90%), Positives = 206/219 (94%)
Query: 46 SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 105
S WYGPDR KYLGPFS PSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIHCRWAM
Sbjct: 8 SIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAM 67
Query: 106 LGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 165
LGALGCVFPELL +NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWACQVV
Sbjct: 68 LGALGCVFPELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 127
Query: 166 LMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
LMG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG
Sbjct: 128 LMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 187
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
FFVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 188 FFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 226
>gi|195616522|gb|ACG30091.1| chlorophyll a-b binding protein 2 [Zea mays]
Length = 241
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/267 (79%), Positives = 222/267 (83%), Gaps = 29/267 (10%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TMAL+S + VGK A S ++ GRI+MRKT K +SGSPWYG DRV YL
Sbjct: 1 MAAATMALTSRALVGKP---ATSTRDVFGEGRITMRKTAGKPKPAASGSPWYGADRVLYL 57
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 58 GPLSGQPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI
Sbjct: 118 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI-- 175
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 176 ---------------------ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 214
Query: 238 LENLADHLADPVNNNAWAYATNFVPGK 264
+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 215 VENLADHLADPVNNNAWAYATNFVPGK 241
>gi|359806053|ref|NP_001241179.1| uncharacterized protein LOC100815789 [Glycine max]
gi|255638947|gb|ACU19775.1| unknown [Glycine max]
Length = 265
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/268 (77%), Positives = 227/268 (84%), Gaps = 7/268 (2%)
Query: 1 MATSTMALSSSFVG----KAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKY 56
MATS + S+F G K +N + GR +MR+T KS S WYGPDR KY
Sbjct: 1 MATSAIQ-QSAFTGQTALKQLNEFVRKTGGAGKGRTNMRRT-VKSAPQ-SIWYGPDRPKY 57
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPE+
Sbjct: 58 LGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPEI 117
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
L +NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR+
Sbjct: 118 LEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFVEGYRVG 177
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264
P++NL DH+ADPV NNAWAYATNFVPG+
Sbjct: 238 PIQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|67772803|gb|AAY81730.1| chloroplast putative light harvesting chlorophyll a/b binding
protein, partial [Pinus krempfii]
Length = 250
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/240 (84%), Positives = 216/240 (90%), Gaps = 9/240 (3%)
Query: 14 GKAVNLAPSGNELSNGG-------RISMRKTGSKSVSSGSP--WYGPDRVKYLGPFSGEP 64
GK +L P N+L G R++MRK+ +K +S SP WYGPDRV YLGPFSGEP
Sbjct: 11 GKISSLKPHSNQLLGVGAGVHGESRVTMRKSATKKFASESPSPWYGPDRVLYLGPFSGEP 70
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKF
Sbjct: 71 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKF 130
Query: 125 GEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVT 184
GEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGPLGEVT
Sbjct: 131 GEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWASQVILMGAVEGYRIAGGPLGEVT 190
Query: 185 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 244
DP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADH
Sbjct: 191 DPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADH 250
>gi|357495319|ref|XP_003617948.1| Chlorophyll a/b binding protein [Medicago truncatula]
gi|355519283|gb|AET00907.1| Chlorophyll a/b binding protein [Medicago truncatula]
Length = 265
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/270 (77%), Positives = 226/270 (83%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGG------RISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F GK GNE R +MR+T KS S WYGPDR
Sbjct: 1 MATSAIQ-QSAFTGKTG--LKQGNEFIRKAGSFGQSRFTMRRT-VKSAPE-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FP
Sbjct: 56 KYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L +NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR
Sbjct: 116 EILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE DPLYPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP++NL DH+ADPV NNAWAYATNFVPG+
Sbjct: 236 KGPVQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|16805332|gb|AAL29886.1|M97171_1 chlorophyll a/b binding protein type II [Glycine max]
Length = 265
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/268 (76%), Positives = 227/268 (84%), Gaps = 7/268 (2%)
Query: 1 MATSTMALSSSFVG----KAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKY 56
MATS + S+F G K +N + GR +MR+T KS S WYGPDR KY
Sbjct: 1 MATSAIQ-QSAFAGQTALKQLNELVRKTGGAGKGRTTMRRT-VKSAPQ-SIWYGPDRPKY 57
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPE+
Sbjct: 58 LGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPEI 117
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
L +NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR+
Sbjct: 118 LEKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFVEGYRVG 177
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264
P++NL DH+ADPV NNAWAYATNFVPG+
Sbjct: 238 PIQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|149392272|gb|ABR25974.1| chloroplast chlorophyll a-b binding protein precursor [Oryza sativa
Indica Group]
Length = 253
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/259 (79%), Positives = 225/259 (86%), Gaps = 11/259 (4%)
Query: 11 SFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPP 65
SF+G A P +EL +GGRI+MR+T KS S WYGPDR KYLGPFS + P
Sbjct: 1 SFLGTA----PRRDELVRRVGDSGGRITMRRT-VKSAPQ-SIWYGPDRPKYLGPFSEQTP 54
Query: 66 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 125
SYLTGEFPGDY WDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFG
Sbjct: 55 SYLTGEFPGDYRWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFG 114
Query: 126 EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTD 185
EAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR+ GGPLGE D
Sbjct: 115 EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLD 174
Query: 186 PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 245
+YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+
Sbjct: 175 KVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHV 234
Query: 246 ADPVNNNAWAYATNFVPGK 264
ADPV NNAWAYATNFVPGK
Sbjct: 235 ADPVANNAWAYATNFVPGK 253
>gi|358248712|ref|NP_001240183.1| uncharacterized protein LOC100793702 [Glycine max]
gi|255635740|gb|ACU18219.1| unknown [Glycine max]
Length = 265
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/268 (76%), Positives = 227/268 (84%), Gaps = 7/268 (2%)
Query: 1 MATSTMALSSSFVG----KAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKY 56
MATS + S+F G K +N + GR +MR+T KS S WYGPDR KY
Sbjct: 1 MATSAIQ-QSAFAGQTALKQLNELVRKTGGAGKGRTNMRRT-VKSAPQ-SIWYGPDRPKY 57
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPE+
Sbjct: 58 LGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPEI 117
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
L +NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR+
Sbjct: 118 LEKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFVEGYRVG 177
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264
P++NL DH+ADPV NNAWAYATNFVPG+
Sbjct: 238 PIQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|217072028|gb|ACJ84374.1| unknown [Medicago truncatula]
Length = 265
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/270 (77%), Positives = 226/270 (83%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGG------RISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F GK GNE R +MR+T KS S WYGPDR
Sbjct: 1 MATSAIQ-QSAFTGKTG--LKQGNEFIRKAGSFGQSRFTMRRT-VKSAPE-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FP
Sbjct: 56 KYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L +NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA +VVLMG VEGYR
Sbjct: 116 EILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATRVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE DPLYPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP++NL DH+ADPV NNAWAYATNFVPG+
Sbjct: 236 KGPVQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|388514477|gb|AFK45300.1| unknown [Medicago truncatula]
Length = 265
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/270 (77%), Positives = 225/270 (83%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGG------RISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F GK GNE R +MR+T KS S WYGPDR
Sbjct: 1 MATSAIQ-QSAFTGKTG--LKQGNEFIRKAGSFGQSRFTMRRT-VKSAPE-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FP
Sbjct: 56 KYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L +NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR
Sbjct: 116 EILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE DPLYPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVT
Sbjct: 176 VGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTD 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP++NL DH+ADPV NNAWAYATNFVPG+
Sbjct: 236 KGPVQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|9587203|gb|AAF89205.1|AF279248_1 LHCII type II chlorophyll a/b-binding protein [Vigna radiata]
Length = 265
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/268 (77%), Positives = 226/268 (84%), Gaps = 7/268 (2%)
Query: 1 MATSTMALSSSFVG----KAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKY 56
MAT+ S+F G K VN S GR +MR+T KS S WYGPDR KY
Sbjct: 1 MATTAFQ-QSAFAGQTALKQVNEFVRKTGGSGKGRTNMRRT-VKSAPQ-SIWYGPDRPKY 57
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALG VFPE+
Sbjct: 58 LGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGIVFPEI 117
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
L +NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR+
Sbjct: 118 LEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFVEGYRVG 177
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFS+FGFFVQAIVTGKG
Sbjct: 178 GGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSVFGFFVQAIVTGKG 237
Query: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264
P++NL DH+ADPV NNAWAYATNFVPG+
Sbjct: 238 PIQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|56809381|gb|AAW31512.1| light-harvesting chlorophyll-a/b binding protein Lhcb2 [Pisum
sativum]
Length = 265
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/270 (76%), Positives = 226/270 (83%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGG------RISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F GK GNE R +MR+T KS S WYGPDR
Sbjct: 1 MATSAIQ-QSAFTGKTG--LRQGNEFIRKAGNFGQARFTMRRT-VKSAPE-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FP
Sbjct: 56 KYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
ELL +NGVKFGEAVWFKAG+QIF+EGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR
Sbjct: 116 ELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE DPLYPGG+FDPLGLADDP++FAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP++NL DH+ADPV NNAWA+ATNFVPG+
Sbjct: 236 KGPIQNLYDHVADPVANNAWAFATNFVPGQ 265
>gi|115797|sp|P27520.1|CB215_PEA RecName: Full=Chlorophyll a-b binding protein 215, chloroplastic;
AltName: Full=LHCII type II CAB-215; Short=LHCP; Flags:
Precursor
gi|20658|emb|CAA40365.1| chlorophyll a/b-binding protein [Pisum sativum]
Length = 265
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/270 (76%), Positives = 226/270 (83%), Gaps = 11/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG------GRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F GK GNE R +MR+T KS S WYGPDR
Sbjct: 1 MATSAIQ-QSAFTGKTG--LRQGNEFIRKRGNFGQARFTMRRT-VKSAPE-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FP
Sbjct: 56 KYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
ELL +NGVKFGEAVWFKAG+QIF+EGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR
Sbjct: 116 ELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE DPLYPGG+FDPLGLADDP++FAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP++NL DH+ADPV NNAWA+ATNFVPG+
Sbjct: 236 KGPIQNLYDHVADPVANNAWAFATNFVPGQ 265
>gi|225690804|gb|ACO06088.1| chlorophyll a-b binding protein [Triticum aestivum]
Length = 263
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/268 (75%), Positives = 225/268 (83%), Gaps = 11/268 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN-----GGRISMRKTGSKSVSSGSPWYGPDRVK 55
MA S + ++SF+G A P ++L GGRI+MR+T KS S WYGPDR K
Sbjct: 1 MAASALHQTTSFLGTA----PRRDDLVRSVGDFGGRITMRRT-VKSAPQ-SIWYGPDRPK 54
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 55 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 114
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+L++NG+KFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+
Sbjct: 115 ILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFIEGYRV 174
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPL E D +YPGG+FDPLGLADDP+ AELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 175 GGGPLDEGLDIIYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGFFVQAIVTGK 234
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPG 263
GP+ENL D L DP NNNAWA+AT+F PG
Sbjct: 235 GPVENLFDQLRDPGNNNAWAFATHFCPG 262
>gi|359754897|gb|AEV59638.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis arctobia]
Length = 212
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/209 (92%), Positives = 199/209 (95%), Gaps = 2/209 (0%)
Query: 31 RISMRK--TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 88
+ +MRK T K SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 4 KFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 63
Query: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 148
TFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP
Sbjct: 64 TFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 123
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAEL
Sbjct: 124 SLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEL 183
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
KVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 KVKELKNGRLAMFSMFGFFVQAIVTGKGP 212
>gi|302810440|ref|XP_002986911.1| light-harvesting complex [Selaginella moellendorffii]
gi|300145316|gb|EFJ11993.1| light-harvesting complex [Selaginella moellendorffii]
Length = 267
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/248 (77%), Positives = 212/248 (85%), Gaps = 8/248 (3%)
Query: 22 SGNELSNG------GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGD 75
S NELS R MR+T ++ + S WYGPDR K+LGPFS + PSYLTGEFPGD
Sbjct: 21 SPNELSRKVGNLGEARTVMRRT--RASTPDSIWYGPDRPKFLGPFSEQTPSYLTGEFPGD 78
Query: 76 YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQ 135
YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NG+KFGEAVWFKAG+Q
Sbjct: 79 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGIKFGEAVWFKAGSQ 138
Query: 136 IFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDP 195
IF EGGLDYLGNP+L+HAQSILAIWA QV+LMGAVEGYR+ GGPLGE D +YPGG+FDP
Sbjct: 139 IFKEGGLDYLGNPNLVHAQSILAIWASQVILMGAVEGYRVGGGPLGEGLDKIYPGGAFDP 198
Query: 196 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA 255
LGLADDP+ FAELKVKE+KNGRLAMFSMFGFF QAIVTGKGP+ENL DHL +P NNAWA
Sbjct: 199 LGLADDPDTFAELKVKELKNGRLAMFSMFGFFTQAIVTGKGPIENLLDHLDNPTVNNAWA 258
Query: 256 YATNFVPG 263
YATNF PG
Sbjct: 259 YATNFTPG 266
>gi|2570513|gb|AAB82142.1| chlorophyll a-b binding protein [Oryza sativa Indica Group]
Length = 263
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/269 (73%), Positives = 223/269 (82%), Gaps = 11/269 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MA S + ++SF+G A P +EL ++GGRI+MR+T KS + WYGPDR K
Sbjct: 1 MAASALHQTTSFLGTA----PRRDELVRRVGNSGGRITMRRT-VKSAPQ-NIWYGPDRPK 54
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTG+FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPE
Sbjct: 55 YLGPFSEQTPSYLTGKFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCFFPE 114
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+L++NGV FGEAVWFKAGAQIFSEGGLDYLGNP+L+ QSILAIWA QVVLMG VEGYR+
Sbjct: 115 ILSKNGVNFGEAVWFKAGAQIFSEGGLDYLGNPALVRPQSILAIWAVQVVLMGFVEGYRV 174
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE D +YPGG+FD LGLA+DP+ FAE KVKE NGRLAMFSM GFFVQAIVTGK
Sbjct: 175 GGGPLGEGLDKVYPGGAFDHLGLAEDPDTFAEFKVKEFNNGRLAMFSMLGFFVQAIVTGK 234
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+EN DH+ADPV NNAWAYATNFVPGK
Sbjct: 235 GPIENFFDHVADPVANNAWAYATNFVPGK 263
>gi|108709619|gb|ABF97414.1| Chlorophyll a-b binding protein, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
Length = 219
Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/216 (87%), Positives = 203/216 (93%)
Query: 49 YGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 108
YGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGA
Sbjct: 4 YGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGA 63
Query: 109 LGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG 168
LGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG
Sbjct: 64 LGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMG 123
Query: 169 AVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 228
VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFV
Sbjct: 124 FVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFV 183
Query: 229 QAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
QAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 184 QAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 219
>gi|326510279|dbj|BAJ87356.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/215 (86%), Positives = 202/215 (93%)
Query: 49 YGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 108
YGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGA
Sbjct: 4 YGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 63
Query: 109 LGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG 168
LGCVFPE+L++NG+KFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG
Sbjct: 64 LGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 123
Query: 169 AVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 228
+EGYR+ GGPLGE D +YPGG+FDPLGLADDP+ AELKVKE+KNGRLAMFSMFGFFV
Sbjct: 124 FIEGYRVGGGPLGEGLDIIYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGFFV 183
Query: 229 QAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
QAIVTGKGP+ENL DH+ADPVNNNAWA+ATNF PG
Sbjct: 184 QAIVTGKGPVENLFDHIADPVNNNAWAFATNFAPG 218
>gi|116783114|gb|ABK22798.1| unknown [Picea sitchensis]
Length = 253
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/269 (75%), Positives = 219/269 (81%), Gaps = 21/269 (7%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MAT++ SSS G+ + L P NEL ++ RI+MR+T + S WYGPDR K
Sbjct: 1 MATASAIQSSSLAGQTL-LRPHQNELVKKVGASQARITMRRTVRSAPES--IWYGPDRPK 57
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA MLGALGCVFPE
Sbjct: 58 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA-------------MLGALGCVFPE 104
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA+ GVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG +EGYR+
Sbjct: 105 LLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRV 164
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 165 GGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 224
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 225 GPIENLFDHLADPTANNAWAYATNFVPGK 253
>gi|125620170|gb|ABN46977.1| chlorophyll a/b-binding protein [Nelumbo nucifera]
Length = 269
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/264 (73%), Positives = 218/264 (82%), Gaps = 3/264 (1%)
Query: 2 ATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSS--GSPWYGPDRVKYLG 58
A+ M LSS S GKA+ L ++ G +MR T S+ S G PWYGPDRVKY+G
Sbjct: 3 ASVIMTLSSPSLAGKALKLTGFTSKNLGEGGFTMRSTLSRPRQSITGGPWYGPDRVKYMG 62
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSG+ PSYLTGEFPGDYGWD+AGLSA+PETFAKNRELEVIH RWAMLG +GC+ PELL
Sbjct: 63 PFSGQTPSYLTGEFPGDYGWDSAGLSAEPETFAKNRELEVIHARWAMLGTVGCIVPELLE 122
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
RNGVK GEAVWFKAG+QIF + GL+YLG+P LIHAQ+ILA+ A QV+LMGA+EGYRI+GG
Sbjct: 123 RNGVKIGEAVWFKAGSQIFRDEGLNYLGDPKLIHAQNILAVLAAQVILMGAIEGYRISGG 182
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
PLGE TDPLYPGG+FDPL LADDPE FA LKVKEIKNGRLAMF+M GF+VQAIVTGKGPL
Sbjct: 183 PLGEPTDPLYPGGNFDPLHLADDPEEFAILKVKEIKNGRLAMFAMLGFYVQAIVTGKGPL 242
Query: 239 ENLADHLADPVNNNAWAYATNFVP 262
ENL DHLADP NNAWA+AT F P
Sbjct: 243 ENLYDHLADPFKNNAWAFATAFDP 266
>gi|357497757|ref|XP_003619167.1| Chlorophyll a-b binding protein 3C-like protein [Medicago
truncatula]
gi|355494182|gb|AES75385.1| Chlorophyll a-b binding protein 3C-like protein [Medicago
truncatula]
Length = 229
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/235 (81%), Positives = 199/235 (84%), Gaps = 20/235 (8%)
Query: 30 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 89
G+ KT +K VSSGSPWYGPDRVKYLGPF GE PSYLTGEFPGDYGW+TAGLSADPET
Sbjct: 15 GKGHHEKTTTKKVSSGSPWYGPDRVKYLGPFFGEAPSYLTGEFPGDYGWNTAGLSADPET 74
Query: 90 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 149
FAKNRELEVIH RWAM WFKA +QIFSEGGLDYLGNPS
Sbjct: 75 FAKNRELEVIHSRWAMFDR--------------------WFKARSQIFSEGGLDYLGNPS 114
Query: 150 LIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELK 209
L+HAQSILAIWACQV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAF ELK
Sbjct: 115 LVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVIDPLYPGGSFDPLGLADDPEAFVELK 174
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFV GK
Sbjct: 175 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVLGK 229
>gi|116792703|gb|ABK26463.1| unknown [Picea sitchensis]
Length = 251
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/260 (76%), Positives = 211/260 (81%), Gaps = 36/260 (13%)
Query: 14 GKAVNLAPSGNELSNGG------RISMRK-TGSKSV--SSGSPWYGPDRVKYLGPFSGEP 64
G+ ++ P N+L G R++MRK TG KSV SS SPWYGPDRV YLGPFSGEP
Sbjct: 19 GQLSSVKPQNNQLLGVGGGHGEARLTMRKATGKKSVAASSDSPWYGPDRVLYLGPFSGEP 78
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKF
Sbjct: 79 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKF 138
Query: 125 GEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVT 184
GEAVWFKAGAQIFSEGGLDYLG+P+L+HAQSILAI ACQV+LMGA+EGYR+AGGPLGE
Sbjct: 139 GEAVWFKAGAQIFSEGGLDYLGSPNLVHAQSILAILACQVILMGAIEGYRVAGGPLGE-- 196
Query: 185 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 244
VKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADH
Sbjct: 197 -------------------------VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 231
Query: 245 LADPVNNNAWAYATNFVPGK 264
LADPVNNNAWAYATNFVPGK
Sbjct: 232 LADPVNNNAWAYATNFVPGK 251
>gi|260914751|gb|ACX54226.1| chlorophyll A/B binding protein [Jatropha curcas]
Length = 261
Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/246 (79%), Positives = 210/246 (85%), Gaps = 11/246 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRV 54
MATS + S+F G+ NEL GGRI+MR+T KS S WYGPDR
Sbjct: 1 MATSAIQ-QSAFAGQTA--LKQSNELVRKVGSFGGGRITMRRT-VKSAPQ-SIWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR
Sbjct: 116 EILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFVEGYR 175
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 176 VGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
Query: 235 KGPLEN 240
KGP+EN
Sbjct: 236 KGPIEN 241
>gi|238858956|dbj|BAH70299.1| chlorophyll a/b binding protein [Vicia cinerea]
Length = 266
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/271 (74%), Positives = 213/271 (78%), Gaps = 12/271 (4%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVKYL 57
MA S+MALSS + GK V L PS EL R + RK T K SSGSPWYGPDRVKYL
Sbjct: 1 MAASSMALSSPTLAGKPVKLTPSSQEL-GASRFTTRKSATTKKVASSGSPWYGPDRVKYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH----CRWAMLGALGCVF 113
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN L C W F
Sbjct: 60 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNVSLRSSTPDGPC-WVPWDVSSQSF 118
Query: 114 PELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGY 173
+ N VK FKAG+QIFSEGGLDYLGNPSL QSILAIWA QV+LMGAVEGY
Sbjct: 119 CPVTVLNSVKL---CGFKAGSQIFSEGGLDYLGNPSLGSRQSILAIWATQVILMGAVEGY 175
Query: 174 RIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 233
RIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVT
Sbjct: 176 RIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT 235
Query: 234 GKGPLENLADHLADPVNNNAWAYATNFVPGK 264
GKGPLENLADHL+DPVNNNAW+YATNFVPGK
Sbjct: 236 GKGPLENLADHLSDPVNNNAWSYATNFVPGK 266
>gi|302833824|ref|XP_002948475.1| hypothetical protein VOLCADRAFT_73821 [Volvox carteri f.
nagariensis]
gi|300266162|gb|EFJ50350.1| hypothetical protein VOLCADRAFT_73821 [Volvox carteri f.
nagariensis]
Length = 257
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/235 (77%), Positives = 201/235 (85%), Gaps = 3/235 (1%)
Query: 31 RISMRKTGSKSVSSGSP---WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 87
++ R+T + S +P WYGPDR +LG F+GEPPSYLTGEFPGDYGWDTAGLSADP
Sbjct: 21 KVEARRTVKPAAKSSTPDSFWYGPDRPLFLGAFTGEPPSYLTGEFPGDYGWDTAGLSADP 80
Query: 88 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGN 147
ETF + RELE+IH RWAMLGALGC+FPELL GV FGE+VWFKAGAQIF EGGLDYLGN
Sbjct: 81 ETFKRYRELELIHARWAMLGALGCIFPELLGSYGVPFGESVWFKAGAQIFQEGGLDYLGN 140
Query: 148 PSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAE 207
PSL+HAQSILAI QV+LMGA+EGYR+ GGPLGE D LYPGGSFDPLGLADDP+ FAE
Sbjct: 141 PSLVHAQSILAILGTQVILMGAIEGYRVNGGPLGEGLDKLYPGGSFDPLGLADDPDTFAE 200
Query: 208 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL+NL+DHLA+P NNA+AYAT F P
Sbjct: 201 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLQNLSDHLANPGVNNAFAYATKFTP 255
>gi|12582|emb|CAA48410.1| light harvesting chlorophyll a /b binding protein [Hedera helix]
Length = 193
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/193 (95%), Positives = 189/193 (97%), Gaps = 1/193 (0%)
Query: 73 PGDYGWDTA-GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 131
PGDYGWDT+ GLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK
Sbjct: 1 PGDYGWDTSRGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 60
Query: 132 AGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGG 191
AGAQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGG
Sbjct: 61 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 120
Query: 192 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 251
SFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 121 SFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 180
Query: 252 NAWAYATNFVPGK 264
NAWAYATNFVPGK
Sbjct: 181 NAWAYATNFVPGK 193
>gi|169061|gb|AAA33655.1| chlorophyll a/b-binding protein [Pisum sativum]
Length = 194
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/194 (92%), Positives = 188/194 (96%)
Query: 71 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 130
EFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWF
Sbjct: 1 EFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF 60
Query: 131 KAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPG 190
KAG+QIFSEGGLDYLGNPSL+HAQSIL +WA QV+LMGAVEGYRIAGGPLGEV DPLYPG
Sbjct: 61 KAGSQIFSEGGLDYLGNPSLVHAQSILTVWATQVILMGAVEGYRIAGGPLGEVVDPLYPG 120
Query: 191 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 250
GSFDPLGLA+ PEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVN
Sbjct: 121 GSFDPLGLAEIPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 180
Query: 251 NNAWAYATNFVPGK 264
NNAWAYATNF PGK
Sbjct: 181 NNAWAYATNFAPGK 194
>gi|13265505|gb|AAG40044.2|AF324693_1 At2g34430 [Arabidopsis thaliana]
Length = 268
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/271 (72%), Positives = 216/271 (79%), Gaps = 10/271 (3%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS + GKAV L+P+ +E+ GRI+MRK + SGSPWYG DRVKYLGP
Sbjct: 1 MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLG----NPSLIHAQSILAIWACQVVLMGA-VEGYR 174
NGVKFGEAVW + F++ +G PSL+HAQ + G+ + R
Sbjct: 121 NGVKFGEAVWVQG---WFTDLQRRRIGPTWATPSLVHAQEHFSHLGYSSYPHGSLLRATR 177
Query: 175 IAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 233
+ G GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVT
Sbjct: 178 VPGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT 237
Query: 234 GKGPLENLADHLADPVNNNAWAYATNFVPGK 264
GKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 238 GKGPLENLADHLADPVNNNAWAFATNFVPGK 268
>gi|20269804|gb|AAM18057.1|AF495473_1 major light-harvesting complex II protein m1 [Chlamydomonas
reinhardtii]
gi|15430558|dbj|BAB64414.1| light-harvesting chlorophyll-a/b binding protein LhcII-4
[Chlamydomonas reinhardtii]
gi|15430566|dbj|BAB64418.1| light-harvesting chlorophyll-a/b binding protein LhcII-4
[Chlamydomonas reinhardtii]
gi|27542565|gb|AAO16493.1| light-harvesting complex II protein [Chlamydomonas reinhardtii]
Length = 256
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/235 (77%), Positives = 202/235 (85%), Gaps = 3/235 (1%)
Query: 31 RISMRKT---GSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 87
++ R+T SK+ + S WYGP+R +LG F+GEPPSYLTGEFPGDYGWDTAGLSADP
Sbjct: 21 KVEARRTVKPASKASTPDSFWYGPERPLFLGAFTGEPPSYLTGEFPGDYGWDTAGLSADP 80
Query: 88 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGN 147
ETF + RELE+IH RWAMLGALGC+FPELL GV FGEAVWFKAGAQIF EGGLDYLGN
Sbjct: 81 ETFKRYRELELIHARWAMLGALGCIFPELLGSYGVPFGEAVWFKAGAQIFQEGGLDYLGN 140
Query: 148 PSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAE 207
P+L+HAQSILAI QV+LMGA+EGYR+ GGPLGE D LYPGGSFDPLGLADDP+ FAE
Sbjct: 141 PNLVHAQSILAILGTQVLLMGAIEGYRVNGGPLGEGLDKLYPGGSFDPLGLADDPDTFAE 200
Query: 208 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL+NL+DHLA+P NNA+AYAT F P
Sbjct: 201 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLQNLSDHLANPGTNNAFAYATKFTP 255
>gi|104763696|gb|ABF74606.1| chloroplast chlorophyll a/b-binding protein [Agave tequilana]
Length = 186
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/185 (98%), Positives = 185/185 (100%)
Query: 80 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 139
TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE
Sbjct: 2 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 61
Query: 140 GGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 199
GGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA
Sbjct: 62 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 121
Query: 200 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 259
DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATN
Sbjct: 122 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATN 181
Query: 260 FVPGK 264
FVPGK
Sbjct: 182 FVPGK 186
>gi|452341|emb|CAA48641.1| type II light-harvesting chlorophyll a /b-binding protein [Zea
mays]
Length = 229
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/231 (83%), Positives = 210/231 (90%), Gaps = 2/231 (0%)
Query: 34 MRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 93
MR+T KSV S WYGPDR KYLGPFS + PSYLTGEFPGDYGW+TAG+SADPETFA+N
Sbjct: 1 MRRT-VKSVPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWETAGVSADPETFARN 58
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
RELEVIH RWAMLGALGCVFPE+LA+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HA
Sbjct: 59 RELEVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHA 118
Query: 154 QSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEI 213
QSILAIWACQVVLMG VEGY + GGPLGE D +YPGG+F+PLGLADDP+ AELKVKE+
Sbjct: 119 QSILAIWACQVVLMGFVEGYGVGGGPLGEGLDKVYPGGAFEPLGLADDPDTAAELKVKEL 178
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPG
Sbjct: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGN 229
>gi|302840684|ref|XP_002951894.1| hypothetical protein VOLCADRAFT_81675 [Volvox carteri f.
nagariensis]
gi|300262795|gb|EFJ46999.1| hypothetical protein VOLCADRAFT_81675 [Volvox carteri f.
nagariensis]
Length = 255
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/258 (71%), Positives = 210/258 (81%), Gaps = 6/258 (2%)
Query: 6 MALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFS-GEP 64
MA + +F KA+ ++ G+ KT +K SG WYGP+R K+LGP+S
Sbjct: 1 MAFAVTFSRKALQVSAKAT-----GKKGTSKTVAKPAPSGIEWYGPNRAKWLGPYSENAT 55
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAMLGALGCV PELL++NGV+F
Sbjct: 56 PAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCVTPELLSKNGVQF 115
Query: 125 GEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVT 184
GEAVWFKAGAQIF EGGLDYLGNPSL+HAQ+I+A ACQV+LMG VEGYR+ GGP GE
Sbjct: 116 GEAVWFKAGAQIFQEGGLDYLGNPSLVHAQNIVATLACQVILMGLVEGYRVNGGPAGEGL 175
Query: 185 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 244
DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH
Sbjct: 176 DPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLNDH 235
Query: 245 LADPVNNNAWAYATNFVP 262
LA+P NNA+A+AT F P
Sbjct: 236 LANPAVNNAFAFATKFTP 253
>gi|20218821|emb|CAC84495.1| putative chlorophyll A-B binding protein type I [Pinus pinaster]
Length = 195
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/194 (92%), Positives = 186/194 (95%)
Query: 71 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 130
FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+NGVKFGEAVWF
Sbjct: 2 RFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWF 61
Query: 131 KAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPG 190
KAGAQIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG +EGYR+ GGPLGE DPLYPG
Sbjct: 62 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPG 121
Query: 191 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 250
G+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLADP
Sbjct: 122 GAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPTA 181
Query: 251 NNAWAYATNFVPGK 264
NNAWAYATNFVPGK
Sbjct: 182 NNAWAYATNFVPGK 195
>gi|145079054|tpg|DAA05896.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm13 [Acetabularia acetabulum]
Length = 255
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/232 (76%), Positives = 200/232 (86%), Gaps = 1/232 (0%)
Query: 33 SMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
SMR+T K + S WYGPDR ++LGPFSG+ PSYLTGEFPGDYGWDTAGLSADPETF +
Sbjct: 22 SMRRTQKKGSAPDSVWYGPDRPQFLGPFSGDTPSYLTGEFPGDYGWDTAGLSADPETFRR 81
Query: 93 NRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLI 151
RELE+IH RWAMLGALGCV PE+L++ GV FGE+VWFKAG+QIF EGGLDYLGN +L+
Sbjct: 82 YRELELIHARWAMLGALGCVTPEILSKYGGVSFGESVWFKAGSQIFQEGGLDYLGNANLV 141
Query: 152 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVK 211
HAQSILAI CQVVLMGA+E YR+ GGPLGE DPLYPG FDPLGLADDP+ FAELK+K
Sbjct: 142 HAQSILAILGCQVVLMGAIEAYRVNGGPLGEGLDPLYPGDKFDPLGLADDPDTFAELKIK 201
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
EIKNGRLAMFSMFGFFVQA+VTGKGP+EN A+H+ADP + NAW YAT FVPG
Sbjct: 202 EIKNGRLAMFSMFGFFVQAVVTGKGPIENWAEHVADPFSVNAWNYATKFVPG 253
>gi|671737|emb|CAA52749.1| Chloropyll a/b binding protein [Amaranthus hypochondriacus]
Length = 186
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/186 (97%), Positives = 184/186 (98%)
Query: 79 DTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFS 138
DTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFS
Sbjct: 1 DTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFS 60
Query: 139 EGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGL 198
EGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGL
Sbjct: 61 EGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL 120
Query: 199 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT 258
ADDP+AFAELKVKEIKNG LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT
Sbjct: 121 ADDPDAFAELKVKEIKNGMLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT 180
Query: 259 NFVPGK 264
NFVPGK
Sbjct: 181 NFVPGK 186
>gi|87313225|gb|ABD37909.1| light-harvesting chlorophyll-a/b binding protein LhcbM1
[Chlamydomonas incerta]
Length = 249
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/235 (76%), Positives = 201/235 (85%), Gaps = 3/235 (1%)
Query: 31 RISMRKT---GSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 87
R+ R+T SK+ + S WYGP+R +LG F+GEPPSYLTGEFPGDYGWDTAGLSADP
Sbjct: 14 RVEARRTVKPASKASTPDSFWYGPERPLFLGAFTGEPPSYLTGEFPGDYGWDTAGLSADP 73
Query: 88 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGN 147
ETF + RELE+IH RWAMLGALGC+FPELL GV FGEAVWFKAGAQIF EGGLDYLGN
Sbjct: 74 ETFKRYRELELIHARWAMLGALGCIFPELLGSYGVPFGEAVWFKAGAQIFQEGGLDYLGN 133
Query: 148 PSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAE 207
+L+HAQSILAI QV+LMGA+EGYR+ GGPLGE D LYPGGSFDPLGLADDP+ F+E
Sbjct: 134 SNLVHAQSILAILGTQVLLMGAIEGYRVNGGPLGEGLDKLYPGGSFDPLGLADDPDTFSE 193
Query: 208 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL+NL+DHLA+P NNA+AYAT F P
Sbjct: 194 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLQNLSDHLANPGTNNAFAYATKFTP 248
>gi|74272671|gb|ABA01131.1| chloroplast light-harvesting chlorophyll-a/b binding protein
[Chlamydomonas incerta]
Length = 257
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/260 (70%), Positives = 212/260 (81%), Gaps = 8/260 (3%)
Query: 6 MALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSV--SSGSPWYGPDRVKYLGPFS-G 62
MA + SF KA+ ++ G+ KT +KS SSG +YGP+R K+LGP+S
Sbjct: 1 MAFALSFSRKALQVSAKAT-----GKKGTGKTAAKSAPASSGIEFYGPNRAKWLGPYSEN 55
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAMLGALGC+ PELLA+NG
Sbjct: 56 ATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCLTPELLAKNGT 115
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 182
+FGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQ+I+A ACQV+LMG VEGYR+ GGP GE
Sbjct: 116 QFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATLACQVILMGLVEGYRVNGGPAGE 175
Query: 183 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 242
DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP++NL
Sbjct: 176 GLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPVQNLD 235
Query: 243 DHLADPVNNNAWAYATNFVP 262
DHL++P NNA+A+AT F P
Sbjct: 236 DHLSNPTVNNAFAFATKFTP 255
>gi|19423285|gb|AAL88456.1|AF479777_1 major light-harvesting complex II protein m10 [Chlamydomonas
reinhardtii]
Length = 256
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/240 (73%), Positives = 205/240 (85%), Gaps = 3/240 (1%)
Query: 26 LSNGGRISMRKT---GSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAG 82
L++ ++ R+T SK+ + S WYGP+R +LG F+GEPPSYLTGEFPGDYGWDTAG
Sbjct: 15 LASTVKVEARRTVKPASKASTPDSFWYGPERPLFLGAFTGEPPSYLTGEFPGDYGWDTAG 74
Query: 83 LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGL 142
LSADPETF + RELE+IH RWAMLGALGC+ PELLA++G +FGEAVWFKAGAQIFSEGGL
Sbjct: 75 LSADPETFKRYRELELIHARWAMLGALGCITPELLAKSGTQFGEAVWFKAGAQIFSEGGL 134
Query: 143 DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDP 202
DYLGNPSL+HAQ+I+A A QV+LMG VEGYR+ GGP GE DPLYPG SFDPLGLADDP
Sbjct: 135 DYLGNPSLVHAQNIVATLAVQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDP 194
Query: 203 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP++NL DHL++P NNA+A+AT F P
Sbjct: 195 DTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLSNPTVNNAFAFATKFTP 254
>gi|116789194|gb|ABK25154.1| unknown [Picea sitchensis]
Length = 240
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/269 (71%), Positives = 206/269 (76%), Gaps = 34/269 (12%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MAT++ SSS G+ + L P NEL ++ RI+MR+T + S WYGPDR K
Sbjct: 1 MATASAIQSSSLAGQTL-LRPHQNELVKKVGASQARITMRRTVRSAPES--IWYGPDRPK 57
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE
Sbjct: 58 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA+ GVKFGEAVWFKA IWA QVVLMG +EGYR+
Sbjct: 118 LLAKTGVKFGEAVWFKA--------------------------IWASQVVLMGLIEGYRV 151
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 152 GGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 211
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 212 GPIENLFDHLADPTANNAWAYATNFVPGK 240
>gi|145079233|tpg|DAA05905.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm12 [Acetabularia acetabulum]
Length = 255
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/232 (75%), Positives = 200/232 (86%), Gaps = 1/232 (0%)
Query: 33 SMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
SMR+T KS + S WYGPDR ++LGPFSG+ PSYLTGEFPGDYGWDTAGLSADPETF +
Sbjct: 22 SMRRTQKKSSAPDSVWYGPDRPQFLGPFSGDCPSYLTGEFPGDYGWDTAGLSADPETFRR 81
Query: 93 NRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLI 151
RE E+IH RWAMLGALGCV PE+L++ GV FGE+VWFKAG+QIF EGGLDYLGN +L+
Sbjct: 82 YREQELIHARWAMLGALGCVTPEILSKYGGVSFGESVWFKAGSQIFQEGGLDYLGNANLV 141
Query: 152 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVK 211
HAQSILAI CQVVLMGA+E YR+ GGPLGE DPLYPG FDPLGLADDP+ FAELK+K
Sbjct: 142 HAQSILAILGCQVVLMGAIEAYRVNGGPLGEGLDPLYPGDKFDPLGLADDPDTFAELKIK 201
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
EIKNGRLAMFSMFGF+VQA+VTGKGP+EN A+H+A+P + NAW YAT FVPG
Sbjct: 202 EIKNGRLAMFSMFGFYVQAVVTGKGPIENWAEHVANPFSVNAWNYATKFVPG 253
>gi|302856312|ref|XP_002959561.1| hypothetical protein VOLCADRAFT_78398 [Volvox carteri f.
nagariensis]
gi|302856626|ref|XP_002959664.1| hypothetical protein VOLCADRAFT_108699 [Volvox carteri f.
nagariensis]
gi|300254677|gb|EFJ39271.1| hypothetical protein VOLCADRAFT_108699 [Volvox carteri f.
nagariensis]
gi|300254888|gb|EFJ39374.1| hypothetical protein VOLCADRAFT_78398 [Volvox carteri f.
nagariensis]
Length = 254
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 175/221 (79%), Positives = 195/221 (88%), Gaps = 1/221 (0%)
Query: 43 SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 101
SSG WYGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH
Sbjct: 32 SSGIEWYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHA 91
Query: 102 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 161
RWAMLGALGC+ PELL++NGV+FGEAVWFKAGAQIF EGGLDYLGNPSL+HAQ+I+A A
Sbjct: 92 RWAMLGALGCLTPELLSKNGVQFGEAVWFKAGAQIFQEGGLDYLGNPSLVHAQNIVATLA 151
Query: 162 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 221
CQV+LMG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMF
Sbjct: 152 CQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMF 211
Query: 222 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
SMFGFFVQAIVTGKGP+ENL DHLA+P NNA+A+AT F P
Sbjct: 212 SMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 252
>gi|302832904|ref|XP_002948016.1| hypothetical protein VOLCADRAFT_79865 [Volvox carteri f.
nagariensis]
gi|300266818|gb|EFJ51004.1| hypothetical protein VOLCADRAFT_79865 [Volvox carteri f.
nagariensis]
Length = 254
Score = 367 bits (941), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 175/221 (79%), Positives = 195/221 (88%), Gaps = 1/221 (0%)
Query: 43 SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 101
SSG WYGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH
Sbjct: 32 SSGIEWYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHA 91
Query: 102 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 161
RWAMLGALGC+ PELL++NGV+FGEAVWFKAGAQIF EGGLDYLGNPSL+HAQ+I+A A
Sbjct: 92 RWAMLGALGCLTPELLSKNGVQFGEAVWFKAGAQIFQEGGLDYLGNPSLVHAQNIVATLA 151
Query: 162 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 221
CQV+LMG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMF
Sbjct: 152 CQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMF 211
Query: 222 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
SMFGFFVQAIVTGKGP+ENL DHLA+P NNA+A+AT F P
Sbjct: 212 SMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 252
>gi|302854172|ref|XP_002958596.1| hypothetical protein VOLCADRAFT_84524 [Volvox carteri f.
nagariensis]
gi|300256057|gb|EFJ40333.1| hypothetical protein VOLCADRAFT_84524 [Volvox carteri f.
nagariensis]
Length = 254
Score = 367 bits (941), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 175/221 (79%), Positives = 195/221 (88%), Gaps = 1/221 (0%)
Query: 43 SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 101
SSG WYGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH
Sbjct: 32 SSGIEWYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHA 91
Query: 102 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 161
RWAMLGALGC+ PELL++NGV+FGEAVWFKAGAQIF EGGLDYLGNPSL+HAQ+I+A A
Sbjct: 92 RWAMLGALGCLTPELLSKNGVQFGEAVWFKAGAQIFQEGGLDYLGNPSLVHAQNIVATLA 151
Query: 162 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 221
CQV+LMG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMF
Sbjct: 152 CQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMF 211
Query: 222 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
SMFGFFVQAIVTGKGP+ENL DHLA+P NNA+A+AT F P
Sbjct: 212 SMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 252
>gi|159491492|ref|XP_001703699.1| light-harvesting complex II chlorophyll a-b binding protein M3
[Chlamydomonas reinhardtii]
gi|15430554|dbj|BAB64412.1| light-harvesting chlorophyll-a/b binding protein LhcII-1.3
[Chlamydomonas reinhardtii]
gi|15430562|dbj|BAB64416.1| light-harvesting chlorophyll-a/b binding protein LhcII-1.3
[Chlamydomonas reinhardtii]
gi|158270548|gb|EDO96390.1| light-harvesting complex II chlorophyll a-b binding protein M3
[Chlamydomonas reinhardtii]
Length = 257
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 178/258 (68%), Positives = 209/258 (81%), Gaps = 4/258 (1%)
Query: 6 MALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFS-GEP 64
MA + SF KA+ ++ G+ + ++ SSG +YGP+R K+LGP+S
Sbjct: 1 MAFALSFSRKALQVSAKATGKKGTGKTAAKQA---PASSGIEFYGPNRAKWLGPYSENAT 57
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAMLGALGC+ PELLA++G +F
Sbjct: 58 PAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCITPELLAKSGTQF 117
Query: 125 GEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVT 184
GEAVWFKAGAQIFSEGGLDYLGNPSL+HAQ+I+A A QV+LMG VEGYR+ GGP GE
Sbjct: 118 GEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATLAVQVILMGLVEGYRVNGGPAGEGL 177
Query: 185 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 244
DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP++NL DH
Sbjct: 178 DPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDH 237
Query: 245 LADPVNNNAWAYATNFVP 262
L++P NNA+A+AT F P
Sbjct: 238 LSNPTVNNAFAFATKFTP 255
>gi|302851938|ref|XP_002957491.1| hypothetical protein VOLCADRAFT_84135 [Volvox carteri f.
nagariensis]
gi|300257133|gb|EFJ41385.1| hypothetical protein VOLCADRAFT_84135 [Volvox carteri f.
nagariensis]
Length = 254
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 174/219 (79%), Positives = 193/219 (88%), Gaps = 1/219 (0%)
Query: 45 GSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 103
G WYGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RW
Sbjct: 34 GIEWYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARW 93
Query: 104 AMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
AMLGALGCV PELL++NGV+FGEAVWFKAGAQIF EGGLDYLGNPSL+HAQ+I+A ACQ
Sbjct: 94 AMLGALGCVTPELLSKNGVQFGEAVWFKAGAQIFQEGGLDYLGNPSLVHAQNIVATLACQ 153
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
V+LMG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSM
Sbjct: 154 VILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSM 213
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
FGFFVQAIVTGKGP+ENL DHLA+P NNA+A+AT F P
Sbjct: 214 FGFFVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 252
>gi|87313209|gb|ABD37901.1| light-harvesting chlorophyll-a/b binding protein LhcbM4
[Acutodesmus obliquus]
Length = 255
Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 174/222 (78%), Positives = 190/222 (85%)
Query: 43 SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 102
S G+ +YGP+R K+LGPFS P YLTGEF GDYGWDTAGLSADPETF + RELE+IH R
Sbjct: 34 SKGTEFYGPNRAKWLGPFSTATPGYLTGEFAGDYGWDTAGLSADPETFRRYRELELIHAR 93
Query: 103 WAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWAC 162
WAMLGALGC+ PELLA+NGV FGEAVWFKAGAQIF EGGL+YLGN SLIHAQSILA AC
Sbjct: 94 WAMLGALGCITPELLAKNGVPFGEAVWFKAGAQIFQEGGLNYLGNSSLIHAQSILATLAC 153
Query: 163 QVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 222
QV+LMG VEGYR+ GGP GE DPLYPG +FDPLGLADDP+ FAELKVKEIKNGRLAMFS
Sbjct: 154 QVILMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFS 213
Query: 223 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
MFGFFVQAIVTG+GP+ NL HL+DP NNAW YAT FVPG
Sbjct: 214 MFGFFVQAIVTGQGPIANLDAHLSDPSGNNAWNYATKFVPGN 255
>gi|159474462|ref|XP_001695344.1| chloropyll a-b binding protein of LHCII [Chlamydomonas reinhardtii]
gi|158275827|gb|EDP01602.1| chloropyll a-b binding protein of LHCII [Chlamydomonas reinhardtii]
Length = 254
Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 173/221 (78%), Positives = 194/221 (87%), Gaps = 1/221 (0%)
Query: 43 SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 101
SSG +YGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH
Sbjct: 32 SSGVEFYGPNRAKWLGPYSENSTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHA 91
Query: 102 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 161
RWAMLGALGC+ PELLA+NG KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQ+I+A A
Sbjct: 92 RWAMLGALGCLTPELLAKNGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATLA 151
Query: 162 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 221
QV+LMG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMF
Sbjct: 152 VQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMF 211
Query: 222 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
SMFGFFVQAIVTGKGP++NL DHLA+P NNA+A+AT F P
Sbjct: 212 SMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 252
>gi|384253059|gb|EIE26534.1| chlorophyll a/b-binding protein P25 [Coccomyxa subellipsoidea
C-169]
Length = 234
Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 178/230 (77%), Positives = 196/230 (85%), Gaps = 1/230 (0%)
Query: 34 MRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 93
MR+T + S WYG DR K+LGPFSG PSYL+GE+PGDYGWDTAGLSADPETFAK
Sbjct: 5 MRRTVKGKTTPTSMWYGEDRPKWLGPFSGNTPSYLSGEYPGDYGWDTAGLSADPETFAKY 64
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
RE+EVIH RWAMLGALGC+ PELLA+NGV FGEAVW+KAGAQIF+ GGLDYLGNPSL+HA
Sbjct: 65 REIEVIHARWAMLGALGCLTPELLAKNGVSFGEAVWWKAGAQIFAPGGLDYLGNPSLVHA 124
Query: 154 QSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKE 212
QSI+AI A QV+LMGA+EGYR+ GGP GE D +YPGG FDPLGLADDP+ FAELKVKE
Sbjct: 125 QSIIAILASQVLLMGAIEGYRVYGGPGGEGLDKVYPGGDYFDPLGLADDPDTFAELKVKE 184
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
IKNGRLAMFSMFGFFVQAIVTGKGPLENL HLADP NN +A AT FVP
Sbjct: 185 IKNGRLAMFSMFGFFVQAIVTGKGPLENLESHLADPSVNNGFAAATKFVP 234
>gi|87313211|gb|ABD37902.1| light-harvesting chlorophyll-a/b binding protein LhcbM5
[Acutodesmus obliquus]
Length = 250
Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 172/216 (79%), Positives = 187/216 (86%)
Query: 43 SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 102
SSG+ WYGP+R K+LGPFS P YLTGEF GDYGWDTAGLSADPETF + RELE+IH R
Sbjct: 35 SSGTSWYGPERAKWLGPFSTNTPGYLTGEFAGDYGWDTAGLSADPETFRRYRELELIHAR 94
Query: 103 WAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWAC 162
WAMLGALGC+ PELLA+NGV FGEAVWFKAGAQIF EGGL+YLGN SLIHAQSILA AC
Sbjct: 95 WAMLGALGCITPELLAKNGVPFGEAVWFKAGAQIFQEGGLNYLGNSSLIHAQSILATLAC 154
Query: 163 QVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 222
QV+LMG VEGYR+ GGP GE DPLYPG +FDPLGLADDP+ FAELKVKEIKNGRLAMFS
Sbjct: 155 QVILMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFS 214
Query: 223 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT 258
MFGFFVQAIVTG+GP+ NL HL+DP NNAW YAT
Sbjct: 215 MFGFFVQAIVTGQGPIANLDAHLSDPSGNNAWNYAT 250
>gi|87313235|gb|ABD37914.1| light-harvesting chlorophyll-a/b binding protein LhcbM9
[Chlamydomonas incerta]
Length = 254
Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 171/219 (78%), Positives = 193/219 (88%), Gaps = 1/219 (0%)
Query: 45 GSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 103
G +YGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RW
Sbjct: 34 GVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARW 93
Query: 104 AMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
AMLGALGC+ PELLA+NG KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQ+I+A ACQ
Sbjct: 94 AMLGALGCLTPELLAKNGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATLACQ 153
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
V+LMG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKE+KNGRLAMFSM
Sbjct: 154 VILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKELKNGRLAMFSM 213
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
FGFFVQAIVTGKGP++NL DHLA+P NNA+A+AT F P
Sbjct: 214 FGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 252
>gi|168053612|ref|XP_001779229.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669328|gb|EDQ55917.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 266
Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 187/241 (77%), Positives = 203/241 (84%), Gaps = 7/241 (2%)
Query: 27 SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 86
SN R+ MR GSKS SSGS WYGPDR +LGPFSG PSYL GEFPGDYGWDTAGLSAD
Sbjct: 30 SNQARVVMR--GSKS-SSGSMWYGPDRPLFLGPFSGNTPSYLKGEFPGDYGWDTAGLSAD 86
Query: 87 PETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYL 145
PE+FA+NR LE+IH RWAMLGALGC+ PELL + + V E VWFKAGAQIFS+GGLDYL
Sbjct: 87 PESFARNRALELIHGRWAMLGALGCITPELLQKYSRVTLKEPVWFKAGAQIFSDGGLDYL 146
Query: 146 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPE 203
GNP+LIHAQSILA+WA QVVLMGAVE YR G P +GE D LYPGG FDPLGLADDPE
Sbjct: 147 GNPNLIHAQSILAVWAVQVVLMGAVEAYRTNGLPGVGEGGD-LYPGGKYFDPLGLADDPE 205
Query: 204 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENL DHLA+PV+NNAWA+ATNF PG
Sbjct: 206 TLAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLANPVSNNAWAFATNFTPG 265
Query: 264 K 264
Sbjct: 266 N 266
>gi|47026888|gb|AAT08668.1| chloroplast chlorophyll A-B binding protein 40 [Hyacinthus
orientalis]
Length = 237
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 182/229 (79%), Positives = 194/229 (84%), Gaps = 3/229 (1%)
Query: 16 AVNLAPSGNELSNGGRISMRKTGSK--SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 73
AV L PS + +S GR +MRKT +K +VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFP
Sbjct: 2 AVKLTPSSSGVSGDGRFTMRKTVAKPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFP 61
Query: 74 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 133
GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG
Sbjct: 62 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 121
Query: 134 AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSF 193
+QIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AGGPLGEV DPLYPGGSF
Sbjct: 122 SQIFSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSF 181
Query: 194 DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG-KGPLENL 241
DPLGLADDP+AFAELKV E + + G +GPLE L
Sbjct: 182 DPLGLADDPKAFAELKVNEDQEWQAGYVLDVRVLCSRDRDGPRGPLEEL 230
>gi|388504276|gb|AFK40204.1| unknown [Lotus japonicus]
Length = 202
Score = 360 bits (923), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 180/205 (87%), Positives = 190/205 (92%), Gaps = 6/205 (2%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MATSTMA+SS S G+A+ LAPS + + GRI+MRKT +KS VSSGSPWYGPDRVKYL
Sbjct: 1 MATSTMAVSSPSLAGQAIKLAPS---VQDTGRITMRKTTTKSKPVSSGSPWYGPDRVKYL 57
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 58 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 117
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAG
Sbjct: 118 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 177
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDP 202
GPLGEVTDPLYPGGSFDPLGLADDP
Sbjct: 178 GPLGEVTDPLYPGGSFDPLGLADDP 202
>gi|302584050|gb|ADL57411.1| chloroplast LHCII type I chlorophyll a-b binding precursor protein
[Ipomoea nil]
Length = 179
Score = 360 bits (923), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 174/179 (97%), Positives = 177/179 (98%)
Query: 86 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYL 145
D ETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGAQIFSEGGLDYL
Sbjct: 1 DTETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYL 60
Query: 146 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAF 205
GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE+TDPLYPGGSFDPLGLADDPEAF
Sbjct: 61 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPLYPGGSFDPLGLADDPEAF 120
Query: 206 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 121 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 179
>gi|159474480|ref|XP_001695353.1| chloropyll a-b binding protein of LHCII type I, chloroplast
precursor [Chlamydomonas reinhardtii]
gi|158275836|gb|EDP01611.1| chloropyll a-b binding protein of LHCII type I, chloroplast
precursor [Chlamydomonas reinhardtii]
Length = 253
Score = 359 bits (921), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 172/221 (77%), Positives = 194/221 (87%), Gaps = 1/221 (0%)
Query: 43 SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 101
SSG +YGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH
Sbjct: 31 SSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHA 90
Query: 102 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 161
RWAMLGALGC+ PELLA++G KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQ+I+A A
Sbjct: 91 RWAMLGALGCLTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATLA 150
Query: 162 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 221
QV+LMG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMF
Sbjct: 151 VQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMF 210
Query: 222 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
SMFGFFVQAIVTGKGP++NL DHLA+P NNA+A+AT F P
Sbjct: 211 SMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251
>gi|2407314|gb|AAB70556.1| chlorophyll a/b binding protein [Tetraselmis sp. RG-15]
Length = 251
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 174/237 (73%), Positives = 199/237 (83%), Gaps = 2/237 (0%)
Query: 30 GRISMRKTGSKSVSSGS-PWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 88
G++ G K V+ + +YGPDR K+LGPFS + PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 15 GQVGASARGQKQVTRAAVEFYGPDRAKWLGPFSDDTPSYLTGEFPGDYGWDTAGLSADPE 74
Query: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGN 147
TFA RELE+IH RWAMLGALGCV PELL++ GV+FGEAVWFKAGAQIF++GGLDYLGN
Sbjct: 75 TFASYRELELIHARWAMLGALGCVTPELLSKYAGVEFGEAVWFKAGAQIFADGGLDYLGN 134
Query: 148 PSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAE 207
SL+HAQSILAI CQVVLMG E +R+ GGPLGE D L+PGG+FDPLGLADDP+ F+E
Sbjct: 135 SSLVHAQSILAILGCQVVLMGGAEAFRVNGGPLGEDLDKLHPGGAFDPLGLADDPDTFSE 194
Query: 208 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
LKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+EN A+H+ADP +N + YAT FVPG
Sbjct: 195 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPVENWAEHIADPSGSNGFVYATKFVPGN 251
>gi|302765457|ref|XP_002966149.1| light-harvesting complex [Selaginella moellendorffii]
gi|300165569|gb|EFJ32176.1| light-harvesting complex [Selaginella moellendorffii]
Length = 263
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 180/232 (77%), Positives = 197/232 (84%), Gaps = 4/232 (1%)
Query: 35 RKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
R ++ S WYGPDRVK+LGPFS + PSYL GEFPGDYGWDTAGLSADPE FA+NR
Sbjct: 32 RSVQCQAKVSMDLWYGPDRVKFLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFARNR 91
Query: 95 ELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
LE+IH RWAMLGALGCVFPE+L++ GV+F E VWFKAG+QIFS+GGLDYLGNP+L+HA
Sbjct: 92 ALELIHGRWAMLGALGCVFPEVLSKWVGVEFKEKVWFKAGSQIFSDGGLDYLGNPNLVHA 151
Query: 154 QSILAIWACQVVLMGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVK 211
QSILAIWACQV+LMG VEGYRI G P +GE D LYPGG FDPLG ADDPE AELKVK
Sbjct: 152 QSILAIWACQVILMGLVEGYRINGLPDVGEGGD-LYPGGQYFDPLGFADDPETLAELKVK 210
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
EIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAWAYAT FVPG
Sbjct: 211 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDNPVVNNAWAYATRFVPG 262
>gi|302800774|ref|XP_002982144.1| light-harvesting complex [Selaginella moellendorffii]
gi|300150160|gb|EFJ16812.1| light-harvesting complex [Selaginella moellendorffii]
Length = 263
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 180/232 (77%), Positives = 197/232 (84%), Gaps = 4/232 (1%)
Query: 35 RKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
R ++ S WYGPDRVK+LGPFS + PSYL GEFPGDYGWDTAGLSADPE FA+NR
Sbjct: 32 RSVQCQAKVSMDLWYGPDRVKFLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFARNR 91
Query: 95 ELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
LE+IH RWAMLGALGCVFPE+L++ GV+F E VWFKAG+QIFS+GGLDYLGNP+L+HA
Sbjct: 92 ALELIHGRWAMLGALGCVFPEVLSKWVGVEFKEKVWFKAGSQIFSDGGLDYLGNPNLVHA 151
Query: 154 QSILAIWACQVVLMGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVK 211
QSILAIWACQV+LMG VEGYRI G P +GE D LYPGG FDPLG ADDPE AELKVK
Sbjct: 152 QSILAIWACQVILMGLVEGYRINGLPDVGEGGD-LYPGGQYFDPLGFADDPETLAELKVK 210
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
EIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAWAYAT FVPG
Sbjct: 211 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDNPVVNNAWAYATRFVPG 262
>gi|115831|sp|P15773.1|CB2_MALDO RecName: Full=Chlorophyll a-b binding protein AB10, chloroplastic;
AltName: Full=LHCII type I CAB-AB10; Short=LHCP; Flags:
Precursor
gi|19541|emb|CAA35690.1| unnamed protein product [Malus x domestica]
Length = 268
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 187/251 (74%), Positives = 200/251 (79%), Gaps = 3/251 (1%)
Query: 13 VGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 72
+ K L P + L +M K +KS S S RVKYLGPFSGE PSYLTGEF
Sbjct: 20 IAKPSKLNPISSTLIVTAGFTMLKHAAKSKVSSST--CDRRVKYLGPFSGEWPSYLTGEF 77
Query: 73 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 132
PGDYGWDTAGLSA PETFAKNRELEVIH R AM ALGC+FPELL+ G FGEAVWFKA
Sbjct: 78 PGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKA 137
Query: 133 GAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS 192
GAQIFSEGGLDYLGNPSL+HAQSILAIW +V+LMGAVEGYRIA GPLGEVTDPLYP GS
Sbjct: 138 GAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLYP-GS 196
Query: 193 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
FD LGLA+D EAFAELKVKE+KNGRLAMFSMFGFFVQAIV+ K LENLADHL VNNN
Sbjct: 197 FDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNN 256
Query: 253 AWAYATNFVPG 263
A + TNFVPG
Sbjct: 257 ALSNVTNFVPG 267
>gi|159474708|ref|XP_001695467.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|158275950|gb|EDP01725.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 254
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/221 (77%), Positives = 194/221 (87%), Gaps = 1/221 (0%)
Query: 43 SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 101
SSG +YGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH
Sbjct: 32 SSGVEFYGPNRAKWLGPYSENSTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHA 91
Query: 102 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 161
RWAMLGALGC+ PELLA++G KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQ+I+A A
Sbjct: 92 RWAMLGALGCLTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATLA 151
Query: 162 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 221
QV+LMG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMF
Sbjct: 152 VQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMF 211
Query: 222 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
SMFGFFVQAIVTGKGP++NL DHLA+P NNA+A+AT F P
Sbjct: 212 SMFGFFVQAIVTGKGPVQNLDDHLANPGVNNAFAFATKFTP 252
>gi|159471686|ref|XP_001693987.1| light-harvesting protein of photosystem II [Chlamydomonas
reinhardtii]
gi|15430556|dbj|BAB64413.1| light-harvesting chlorophyll-a/b binding protein LhcII-3
[Chlamydomonas reinhardtii]
gi|15430564|dbj|BAB64417.1| light-harvesting chlorophyll-a/b binding protein LhcII-3
[Chlamydomonas reinhardtii]
gi|158277154|gb|EDP02923.1| light-harvesting protein of photosystem II [Chlamydomonas
reinhardtii]
Length = 249
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 176/238 (73%), Positives = 198/238 (83%), Gaps = 6/238 (2%)
Query: 31 RISMRKTGSKSVSSGSP-----WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLS 84
R S+R T S + P WYGPDR K+LGPFS G+ P+YLTGEFPGDYGWDTAGLS
Sbjct: 10 RSSVRPTVSGRSARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLS 69
Query: 85 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDY 144
ADPETF + RELE+IH RWAMLGALGC+ PELLA+NG+ FGEAVWFKAGAQIF+EGGL+Y
Sbjct: 70 ADPETFKRYRELELIHARWAMLGALGCITPELLAKNGIPFGEAVWFKAGAQIFAEGGLNY 129
Query: 145 LGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEA 204
LGN +LIHAQSI+A A QVV+MG E YR GGPLGE DPL+PGG+FDPLGLADDP+
Sbjct: 130 LGNENLIHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDT 189
Query: 205 FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP++NL DHLA+P NA+AYAT F P
Sbjct: 190 FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLANPTAVNAFAYATKFTP 247
>gi|115826|sp|P22686.1|CB2_CHLMO RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|18063|emb|CAA38635.1| chlorophyll a/b-binding protein [Chlamydomonas moewusii]
Length = 256
Score = 356 bits (913), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 174/231 (75%), Positives = 194/231 (83%), Gaps = 1/231 (0%)
Query: 33 SMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
+ + + + S+G WYGPDR K+LGPFS P+YLTGEFPGDYGWDTAGLSADPETF K
Sbjct: 24 TKQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKK 83
Query: 93 NRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLI 151
RELEVIH RWA+LGALG + PELL+ GVKFGE VWFKAGAQIFSEGGLDYLG+P+LI
Sbjct: 84 YRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALI 143
Query: 152 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVK 211
HAQ+I+A A QVVLMG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVK
Sbjct: 144 HAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 203
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
EIKNGRLAMFS FGFFVQAIVTGKGP++NLADHLADP NNA+A AT F P
Sbjct: 204 EIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254
>gi|115827|sp|P14273.1|CB2_CHLRE RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|20269802|gb|AAM18056.1|AF495472_1 major light-harvesting complex II protein m6 [Chlamydomonas
reinhardtii]
gi|167409|gb|AAA33082.1| chlorophyll a/b-binding protein [Chlamydomonas reinhardtii]
Length = 253
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 171/221 (77%), Positives = 192/221 (86%), Gaps = 1/221 (0%)
Query: 43 SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 101
SSG +YGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH
Sbjct: 31 SSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHA 90
Query: 102 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 161
RWAMLGALGC PELLA++G KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQ+I+A A
Sbjct: 91 RWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSA 150
Query: 162 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 221
QV+LMG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLA F
Sbjct: 151 VQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLASF 210
Query: 222 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
SMFGFFVQAIVTGKGP++NL DHLA+P NNA+A+AT F P
Sbjct: 211 SMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251
>gi|4139216|gb|AAD03731.1| light harvesting complex II protein precursor [Chlamydomonas
reinhardtii]
Length = 254
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 171/221 (77%), Positives = 193/221 (87%), Gaps = 1/221 (0%)
Query: 43 SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 101
SSG +YGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH
Sbjct: 32 SSGVEFYGPNRAKWLGPYSENSTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHA 91
Query: 102 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 161
RWAMLGALGC+ PELLA++G KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQ+I+A A
Sbjct: 92 RWAMLGALGCLTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATLA 151
Query: 162 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 221
QV+LMG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNG LAMF
Sbjct: 152 VQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGALAMF 211
Query: 222 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
SMFGFFVQAIVTGKGP++NL DHLA+P NNA+A+AT F P
Sbjct: 212 SMFGFFVQAIVTGKGPVQNLDDHLANPGVNNAFAFATKFTP 252
>gi|310696692|gb|ADP06401.1| putative chlorophyll A/B binding protein [Hevea brasiliensis]
Length = 175
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/175 (98%), Positives = 174/175 (99%)
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE
Sbjct: 1 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 60
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRI
Sbjct: 61 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRI 120
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
AGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA
Sbjct: 121 AGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 175
>gi|87313227|gb|ABD37910.1| light-harvesting chlorophyll-a/b binding protein LhcbM2a
[Chlamydomonas incerta]
Length = 246
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 174/238 (73%), Positives = 198/238 (83%), Gaps = 6/238 (2%)
Query: 31 RISMRKTGSKSVSSGSP-----WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLS 84
R S+R T S + P WYGPDR K+LGPFS G+ P+YLTGEFPGDYGWDTAGLS
Sbjct: 7 RSSVRPTVSGRSARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLS 66
Query: 85 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDY 144
ADPETF + RELE+IH RWAMLGALGC+ PELLA+NG+ FGEAVWFKAG+QIF+EGGL+Y
Sbjct: 67 ADPETFKRYRELELIHARWAMLGALGCITPELLAKNGIPFGEAVWFKAGSQIFAEGGLNY 126
Query: 145 LGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEA 204
LGN +L+HAQSI+A A QVV+MG E YR GGPLGE DPL+PGG+FDPLGLADDP+
Sbjct: 127 LGNENLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDT 186
Query: 205 FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP++NL DHLA+P NA+AYAT F P
Sbjct: 187 FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLANPTAVNAFAYATKFTP 244
>gi|159471942|ref|XP_001694115.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|12658406|gb|AAK01125.1|AF330793_1 light-harvesting complex II protein precursor [Chlamydomonas
reinhardtii]
gi|158277282|gb|EDP03051.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 249
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 170/216 (78%), Positives = 190/216 (87%), Gaps = 1/216 (0%)
Query: 48 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
WYGPDR K+LGPFS G+ P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAML
Sbjct: 32 WYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 91
Query: 107 GALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
GALGC+ PELLA+NG+ FGEAVWFKAGAQIF+EGGL+YLGN +LIHAQSI+A A QVV+
Sbjct: 92 GALGCITPELLAKNGIPFGEAVWFKAGAQIFAEGGLNYLGNENLIHAQSIIATLAFQVVV 151
Query: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
MG E YR GGPLGE DPL+PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 152 MGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 211
Query: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
FVQAIVTGKGP++NL DHLA+P NA+AYAT F P
Sbjct: 212 FVQAIVTGKGPIQNLDDHLANPTAVNAFAYATKFTP 247
>gi|115794|sp|P27489.1|CB23_SOLLC RecName: Full=Chlorophyll a-b binding protein 13, chloroplastic;
AltName: Full=LHCII type III CAB-13; Flags: Precursor
gi|19277|emb|CAA42818.1| LHCII type III [Solanum lycopersicum]
Length = 265
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 185/265 (69%), Positives = 209/265 (78%), Gaps = 12/265 (4%)
Query: 2 ATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFS 61
+++T+ ++ F+G+ N P + ++ G S R T S + WYGPDRVKYLGPFS
Sbjct: 9 SSTTVVKATPFLGQTKNANPLRDVVAMG---SARFTMSNDL-----WYGPDRVKYLGPFS 60
Query: 62 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-N 120
+ PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+L +
Sbjct: 61 AQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWV 120
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP- 179
V F E VWFKAG+QIFS+GGLDYLGNP+L+HAQSILA+ QVVLMG VEG+RI G P
Sbjct: 121 KVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPG 180
Query: 180 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
+GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 VGEGND-LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
Query: 239 ENLADHLADPVNNNAWAYATNFVPG 263
ENL DHL +PV NNAW YAT FVPG
Sbjct: 240 ENLLDHLDNPVANNAWVYATKFVPG 264
>gi|3386569|gb|AAC28490.1| photosystem II type II chlorophyll a/b binding protein [Sorghum
bicolor]
Length = 191
Score = 352 bits (904), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 168/191 (87%), Positives = 180/191 (94%)
Query: 74 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 133
GDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+LA+NGVKFGEAVWFKAG
Sbjct: 1 GDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKAG 60
Query: 134 AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSF 193
AQIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ GGPLGE D +YPGG+F
Sbjct: 61 AQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAF 120
Query: 194 DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
DPLGLADDP+ AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNA
Sbjct: 121 DPLGLADDPDTAAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNA 180
Query: 254 WAYATNFVPGK 264
WAYATNFVPG
Sbjct: 181 WAYATNFVPGN 191
>gi|224122902|ref|XP_002330392.1| light-harvesting complex II protein Lhcb3 [Populus trichocarpa]
gi|222871777|gb|EEF08908.1| light-harvesting complex II protein Lhcb3 [Populus trichocarpa]
Length = 263
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 188/266 (70%), Positives = 206/266 (77%), Gaps = 13/266 (4%)
Query: 2 ATSTMALSSSFVGK-AVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
++ST+ + F+GK N P + +S G K + S WYGPDRVKYLGPF
Sbjct: 6 SSSTIVRPTPFLGKRGSNANPLRDVVSMGN--------GKYIMSNELWYGPDRVKYLGPF 57
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR- 119
S + PSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L +
Sbjct: 58 SAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW 117
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QVVLMG VEG+RI G P
Sbjct: 118 VKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLP 177
Query: 180 -LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
+GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 178 GVGEGND-LYPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 236
Query: 238 LENLADHLADPVNNNAWAYATNFVPG 263
LENL DHL +PV NNAW YAT FVPG
Sbjct: 237 LENLLDHLDNPVANNAWVYATKFVPG 262
>gi|87313229|gb|ABD37911.1| light-harvesting chlorophyll-a/b binding protein LhcbM2b
[Chlamydomonas incerta]
Length = 229
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 168/216 (77%), Positives = 190/216 (87%), Gaps = 1/216 (0%)
Query: 48 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
WYGPDR K+LGPFS G+ P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAML
Sbjct: 12 WYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 71
Query: 107 GALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
GALGC+ PELLA+NG+ FGEAVWFKAG+QIF+EGGL+YLGN +L+HAQSI+A A QVV+
Sbjct: 72 GALGCITPELLAKNGIPFGEAVWFKAGSQIFAEGGLNYLGNENLVHAQSIIATLAFQVVV 131
Query: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
MG E YR GGPLGE DPL+PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 132 MGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 191
Query: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
FVQAIVTGKGP++NL DHLA+P NA+AYAT F P
Sbjct: 192 FVQAIVTGKGPIQNLDDHLANPTAVNAFAYATKFTP 227
>gi|160713965|gb|ABX47018.1| chloroplast chlorophyll a/b binding protein cab-BO3 [Bambusa
oldhamii]
Length = 267
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 189/276 (68%), Positives = 208/276 (75%), Gaps = 23/276 (8%)
Query: 1 MATSTMALSSSFV---------GKAVNLAPSGN-ELSNGGRISMRKTGSKSVSSGSPWYG 50
MA++ MA +S V G+ N +P + + GRI+M S WYG
Sbjct: 1 MASTIMAATSRVVAAKTPFLGQGRTANASPLRDVAAAANGRITM---------SNDLWYG 51
Query: 51 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
PDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALG
Sbjct: 52 PDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALG 111
Query: 111 CVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
C+ PE+L + V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG
Sbjct: 112 CITPEVLQKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGL 171
Query: 170 VEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 227
VEGYRI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFF
Sbjct: 172 VEGYRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFF 230
Query: 228 VQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
VQAIVTGKGPLENL DHL +PV NNAW YAT F PG
Sbjct: 231 VQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG 266
>gi|302849646|ref|XP_002956352.1| hypothetical protein VOLCADRAFT_77072 [Volvox carteri f.
nagariensis]
gi|300258258|gb|EFJ42496.1| hypothetical protein VOLCADRAFT_77072 [Volvox carteri f.
nagariensis]
Length = 250
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 176/239 (73%), Positives = 198/239 (82%), Gaps = 7/239 (2%)
Query: 31 RISMRKTGSKSVSSGSP-----WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLS 84
R S+R T + + P WYGPDR K+LGPFS G+ PSYLTGEFPGDYGWDTAGLS
Sbjct: 10 RSSVRPTVASRAARVVPRAAIEWYGPDRPKFLGPFSEGDVPSYLTGEFPGDYGWDTAGLS 69
Query: 85 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLD 143
ADPETF + RELE+IH RWAMLGALGCV PELL++ GV FGEAVWFKAGAQIF+EGGL+
Sbjct: 70 ADPETFKRYRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLN 129
Query: 144 YLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPE 203
YLGN +L+HAQSI+A A QVV+MG E YR GGPLGE DPL+PGG+FDPLGLADDP+
Sbjct: 130 YLGNENLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPD 189
Query: 204 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLA+P NA+AYAT F P
Sbjct: 190 TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVNAFAYATKFTP 248
>gi|156890564|gb|ABU96692.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 267
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 188/276 (68%), Positives = 209/276 (75%), Gaps = 23/276 (8%)
Query: 1 MATSTMALSSSFV---------GKAVNLAPSGN-ELSNGGRISMRKTGSKSVSSGSPWYG 50
MA++ MA +S V G+A N +P + + GRI+M S WYG
Sbjct: 1 MASTIMAATSRVVAAKTPFLGQGRAANASPLRDVAAAANGRITM---------SNDLWYG 51
Query: 51 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
PDR+KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALG
Sbjct: 52 PDRLKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALG 111
Query: 111 CVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
C+ PE+L + V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG
Sbjct: 112 CITPEVLQKWVRVSFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGL 171
Query: 170 VEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 227
VEGYRI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFF
Sbjct: 172 VEGYRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFF 230
Query: 228 VQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
VQAIVTGKGPLENL DH+ +PV NNAW YAT F PG
Sbjct: 231 VQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPG 266
>gi|145079118|tpg|DAA05899.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm9 [Acetabularia acetabulum]
Length = 229
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 174/232 (75%), Positives = 192/232 (82%), Gaps = 6/232 (2%)
Query: 33 SMRKTGSKSVSSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFA 91
S+R ++ WYGPDR K+LGPFS G+ PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 1 SVRNVSRNAIE----WYGPDRPKWLGPFSEGDVPSYLTGEFPGDYGWDTAGLSADPETFK 56
Query: 92 KNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 150
RE E+IH RWAMLGALGCV PE+LA+ GV GE+VWFKAG+QIF EGGLDYLGNPSL
Sbjct: 57 AYREQELIHARWAMLGALGCVTPEILAKYAGVSCGESVWFKAGSQIFQEGGLDYLGNPSL 116
Query: 151 IHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKV 210
+HAQSILAI CQVVLMG +E YR+ GGPLGE DPL+PG FDPLGLADDP+ FAELKV
Sbjct: 117 VHAQSILAILGCQVVLMGLIEAYRVNGGPLGEGLDPLHPGDKFDPLGLADDPDTFAELKV 176
Query: 211 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
KEIKNGRLAMFSMFGF+VQAIVTGKGP+EN ADH+ADP N AW YAT FVP
Sbjct: 177 KEIKNGRLAMFSMFGFYVQAIVTGKGPIENWADHVADPFNVTAWNYATKFVP 228
>gi|224117282|ref|XP_002317529.1| light-harvesting complex II protein Lhcb3 [Populus trichocarpa]
gi|222860594|gb|EEE98141.1| light-harvesting complex II protein Lhcb3 [Populus trichocarpa]
Length = 263
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 188/266 (70%), Positives = 206/266 (77%), Gaps = 13/266 (4%)
Query: 2 ATSTMALSSSFVGK-AVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
++ST+A + F+GK N P + +S G K + WYGPDRVKYLGPF
Sbjct: 6 SSSTIARPTPFLGKKGSNANPLRDVVSMGN--------GKYIMGNELWYGPDRVKYLGPF 57
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR- 119
S + PSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L +
Sbjct: 58 SAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW 117
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QVVLMG VEG+RI G P
Sbjct: 118 VKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLP 177
Query: 180 -LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
+GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 178 GVGEGND-LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 236
Query: 238 LENLADHLADPVNNNAWAYATNFVPG 263
LENL DHL +PV NNAW YAT FVPG
Sbjct: 237 LENLLDHLDNPVANNAWVYATKFVPG 262
>gi|145079335|tpg|DAA05910.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm6 [Acetabularia acetabulum]
Length = 244
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/223 (76%), Positives = 190/223 (85%), Gaps = 2/223 (0%)
Query: 42 VSSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 100
V + WYGPDR K+LGPFS G+ PSYLTG+FPGDYGWDTAGLSADPETF RE E+IH
Sbjct: 21 VRNAVEWYGPDRAKWLGPFSEGDVPSYLTGQFPGDYGWDTAGLSADPETFKAYREQELIH 80
Query: 101 CRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI 159
RWAMLGALGCV PE+L++ GV FGE+VWFKAG+QIF EGGLDYLGNPSL+HAQSILAI
Sbjct: 81 ARWAMLGALGCVTPEILSKYAGVSFGESVWFKAGSQIFQEGGLDYLGNPSLVHAQSILAI 140
Query: 160 WACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLA 219
CQVVLMG +E YR+ GGPLGE D L+PG FDPLGLADDP+ FAELKVKEIKNGRLA
Sbjct: 141 LGCQVVLMGLIEAYRVNGGPLGEGLDVLHPGEKFDPLGLADDPDTFAELKVKEIKNGRLA 200
Query: 220 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
MFSMFGF+VQAIVTGKGP+EN A+H+ADP + NAW YAT FVP
Sbjct: 201 MFSMFGFYVQAIVTGKGPIENWAEHVADPFSVNAWNYATKFVP 243
>gi|145079356|tpg|DAA05911.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm5 [Acetabularia acetabulum]
Length = 244
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/217 (78%), Positives = 188/217 (86%), Gaps = 2/217 (0%)
Query: 48 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
WYGPDR K+LGPFS G+ PSYLTGEFPGDYGWDTAGLSADPETF RE E+IH RWAML
Sbjct: 27 WYGPDRAKWLGPFSEGDVPSYLTGEFPGDYGWDTAGLSADPETFKAYREQELIHARWAML 86
Query: 107 GALGCVFPELLARN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 165
GALGCV PE+L++ GV FGE+VWFKAG+QIF EGGLDYLGNPSL+HAQSILAI CQVV
Sbjct: 87 GALGCVTPEILSKYAGVSFGESVWFKAGSQIFQEGGLDYLGNPSLVHAQSILAILGCQVV 146
Query: 166 LMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
LMG +E YR+ GGPLGE D L+PG FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFG
Sbjct: 147 LMGLIEAYRVNGGPLGEGLDVLHPGEKFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFG 206
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
F+VQAIVTGKGP+EN A+H+ADP + NAW YAT FVP
Sbjct: 207 FYVQAIVTGKGPIENWAEHVADPFSVNAWNYATKFVP 243
>gi|384253340|gb|EIE26815.1| major light-harvesting complex II protein m10 [Coccomyxa
subellipsoidea C-169]
Length = 250
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 171/226 (75%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 38 GSKSVSSGS-PWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
G+K V+ + +YGP+R YLGPF+ + PSYL GE+PGDYGWDTAGLSADPETFA+ RE+
Sbjct: 25 GTKQVTRAAIEFYGPNRAGYLGPFT-KSPSYLNGEYPGDYGWDTAGLSADPETFARYREI 83
Query: 97 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 156
EVIH RWAMLGALGCV PELLA+NGV FGEAVW+KAG+QIF+ GGLDYLGNPSLIHAQSI
Sbjct: 84 EVIHARWAMLGALGCVTPELLAKNGVSFGEAVWWKAGSQIFAPGGLDYLGNPSLIHAQSI 143
Query: 157 LAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNG 216
+AI QV+LMG +EGYR+ GGP GE D LYPG +FDPLGLADDP+ FAEL+VKEIKNG
Sbjct: 144 IAIVFSQVLLMGLIEGYRVNGGPAGEGLDALYPGEAFDPLGLADDPDTFAELRVKEIKNG 203
Query: 217 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
RLAMFSMFGFFVQAIVTGKGP+ENLADHLA+P NN +A AT FVP
Sbjct: 204 RLAMFSMFGFFVQAIVTGKGPIENLADHLANPSVNNGFAAATKFVP 249
>gi|47026851|gb|AAT08651.1| chloroplast chlorophyll A-B binding protein [Hyacinthus orientalis]
Length = 239
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 177/216 (81%), Positives = 187/216 (86%), Gaps = 4/216 (1%)
Query: 4 STMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK--SVSSGSPWYGPDRVKYLGPF 60
STMALSS S G AV L PS + +S GR +MRKT K +VSSGSPWYGP+RVKYLGPF
Sbjct: 15 STMALSSPSLAGTAVKLTPSSSVVSGDGRFTMRKTAGKPKTVSSGSPWYGPERVKYLGPF 74
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 75 SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 134
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL 180
GVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGPL
Sbjct: 135 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVLLMGAVEGYRVAGGPL 194
Query: 181 GEVTDPLYPGGSFDPLGLADDPEA-FAELKVKEIKN 215
GEV DPLYPGGSFDPLGLA + FA V E +
Sbjct: 195 GEVVDPLYPGGSFDPLGLARRSKTPFASSNVNEDQQ 230
>gi|302842163|ref|XP_002952625.1| hypothetical protein VOLCADRAFT_102070 [Volvox carteri f.
nagariensis]
gi|300261969|gb|EFJ46178.1| hypothetical protein VOLCADRAFT_102070 [Volvox carteri f.
nagariensis]
Length = 270
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 177/252 (70%), Positives = 203/252 (80%), Gaps = 8/252 (3%)
Query: 19 LAPSGNELSNGGRISMRKTGSKSVSSGSP------WYGPDRVKYLGPFS-GEPPSYLTGE 71
PS + + G + + +KS S +P WYGPDR K+LGPFS G+ P+YLTGE
Sbjct: 17 FTPSDFRVYSLGSATHHQHPTKSSGSTAPQLSSWPWYGPDRPKFLGPFSEGDTPAYLTGE 76
Query: 72 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWF 130
FPGDYGWDTAGLSADPETF + RELE+IH RWAMLGALGCV PELL++ GV FGEAVWF
Sbjct: 77 FPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWF 136
Query: 131 KAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPG 190
KAGAQIF+EGGL+YLGN +L+HAQSI+A A QVV+MG E YR GGPLGE DPL+PG
Sbjct: 137 KAGAQIFAEGGLNYLGNENLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPG 196
Query: 191 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 250
G+FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLA+P
Sbjct: 197 GAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSA 256
Query: 251 NNAWAYATNFVP 262
NA+AYAT F P
Sbjct: 257 VNAFAYATKFTP 268
>gi|302842165|ref|XP_002952626.1| hypothetical protein VOLCADRAFT_81918 [Volvox carteri f.
nagariensis]
gi|300261970|gb|EFJ46179.1| hypothetical protein VOLCADRAFT_81918 [Volvox carteri f.
nagariensis]
Length = 251
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 170/217 (78%), Positives = 190/217 (87%), Gaps = 2/217 (0%)
Query: 48 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
WYGPDR K+LGPFS G+ P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAML
Sbjct: 33 WYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 92
Query: 107 GALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 165
GALGCV PELL++ GV FGEAVWFKAGAQIF+EGGL+YLGN +L+HAQSI+A A QVV
Sbjct: 93 GALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNENLVHAQSIIATLAFQVV 152
Query: 166 LMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
+MG E YR GGPLGE DPL+PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFG
Sbjct: 153 VMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFG 212
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
FFVQAIVTGKGP+ENL+DHLA+P NA+AYAT F P
Sbjct: 213 FFVQAIVTGKGPIENLSDHLANPSAVNAFAYATKFTP 249
>gi|302842321|ref|XP_002952704.1| light-harvesting chlorophyll a/b-binding protein [Volvox carteri f.
nagariensis]
gi|300262048|gb|EFJ46257.1| light-harvesting chlorophyll a/b-binding protein [Volvox carteri f.
nagariensis]
Length = 251
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 170/217 (78%), Positives = 190/217 (87%), Gaps = 2/217 (0%)
Query: 48 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
WYGPDR K+LGPFS G+ P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAML
Sbjct: 33 WYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 92
Query: 107 GALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 165
GALGCV PELL++ GV FGEAVWFKAGAQIF+EGGL+YLGN +L+HAQSI+A A QVV
Sbjct: 93 GALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNENLVHAQSIIATLAFQVV 152
Query: 166 LMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
+MG E YR GGPLGE DPL+PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFG
Sbjct: 153 VMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFG 212
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
FFVQAIVTGKGP+ENL+DHLA+P NA+AYAT F P
Sbjct: 213 FFVQAIVTGKGPIENLSDHLANPSAVNAFAYATKFTP 249
>gi|302840162|ref|XP_002951637.1| hypothetical protein VOLCADRAFT_109135 [Volvox carteri f.
nagariensis]
gi|300263246|gb|EFJ47448.1| hypothetical protein VOLCADRAFT_109135 [Volvox carteri f.
nagariensis]
Length = 251
Score = 350 bits (898), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 170/217 (78%), Positives = 190/217 (87%), Gaps = 2/217 (0%)
Query: 48 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
WYGPDR K+LGPFS G+ P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAML
Sbjct: 33 WYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 92
Query: 107 GALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 165
GALGCV PELL++ GV FGEAVWFKAGAQIF+EGGL+YLGN +L+HAQSI+A A QVV
Sbjct: 93 GALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNENLVHAQSIIATLAFQVV 152
Query: 166 LMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
+MG E YR GGPLGE DPL+PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFG
Sbjct: 153 VMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFG 212
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
FFVQAIVTGKGP+ENL+DHLA+P NA+AYAT F P
Sbjct: 213 FFVQAIVTGKGPIENLSDHLANPSAVNAFAYATKFTP 249
>gi|302835026|ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvox carteri f.
nagariensis]
gi|300265820|gb|EFJ50010.1| hypothetical protein VOLCADRAFT_80470 [Volvox carteri f.
nagariensis]
Length = 252
Score = 350 bits (897), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 170/217 (78%), Positives = 190/217 (87%), Gaps = 2/217 (0%)
Query: 48 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
WYGPDR K+LGPFS G+ P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAML
Sbjct: 34 WYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 93
Query: 107 GALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 165
GALGCV PELL++ GV FGEAVWFKAGAQIF+EGGL+YLGN +L+HAQSI+A A QVV
Sbjct: 94 GALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNENLVHAQSIIATLAFQVV 153
Query: 166 LMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
+MG E YR GGPLGE DPL+PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFG
Sbjct: 154 VMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFG 213
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
FFVQAIVTGKGP+ENL+DHLA+P NA+AYAT F P
Sbjct: 214 FFVQAIVTGKGPIENLSDHLANPSAVNAFAYATKFTP 250
>gi|357122389|ref|XP_003562898.1| PREDICTED: chlorophyll a-b binding protein of LHCII type III,
chloroplastic-like [Brachypodium distachyon]
Length = 267
Score = 350 bits (897), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 181/240 (75%), Positives = 196/240 (81%), Gaps = 13/240 (5%)
Query: 27 SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 86
++ GRISM S WYGPDRVKYLGPFS + PSYL+GEFPGDYGWDTAGLSAD
Sbjct: 37 ASNGRISM---------SNELWYGPDRVKYLGPFSAQTPSYLSGEFPGDYGWDTAGLSAD 87
Query: 87 PETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYL 145
PE FA+NR LEVIH RWAMLGALGCVFPE+L + GV+F E VWFKAGAQIFSEGGLDYL
Sbjct: 88 PEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGAQIFSEGGLDYL 147
Query: 146 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPE 203
GNP+L+HAQSILA+ QV+LMG VEG+RI G +GE D LYPGG FDPLGLADDP
Sbjct: 148 GNPNLVHAQSILAVLGSQVLLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPV 206
Query: 204 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL DPV NNAW +AT F PG
Sbjct: 207 TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAPG 266
>gi|160713967|gb|ABX47019.1| chloroplast chlorophyll a/b binding protein cab-BO3-1 [Bambusa
oldhamii]
Length = 267
Score = 348 bits (894), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 187/276 (67%), Positives = 207/276 (75%), Gaps = 23/276 (8%)
Query: 1 MATSTMALSSSFV---------GKAVNLAPSGN-ELSNGGRISMRKTGSKSVSSGSPWYG 50
MA++ MA +S V G+ N +P + + GRI+M S WYG
Sbjct: 1 MASTIMAATSRVVAAKTPFLGQGRTANASPLRDVAAAANGRITM---------SNDLWYG 51
Query: 51 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
PDRVKYLGPFS + PSYLTGEF GDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALG
Sbjct: 52 PDRVKYLGPFSAQTPSYLTGEFAGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALG 111
Query: 111 CVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
C+ PE+L + V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG
Sbjct: 112 CITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGL 171
Query: 170 VEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 227
VEGYRI G P +GE D LYPGG FDPLGLADDP FAEL+VKEIKNGRLAMFSMFGFF
Sbjct: 172 VEGYRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELRVKEIKNGRLAMFSMFGFF 230
Query: 228 VQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
VQAIVTGKGPLENL DHL +PV NNAW YAT F PG
Sbjct: 231 VQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG 266
>gi|20671|emb|CAA49149.1| chlorophyll a/b-binding protein [Pisum sativum]
gi|141448064|gb|ABO87611.1| chloroplast chlorophyll-a/b binding protein [Pisum sativum]
Length = 265
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/265 (68%), Positives = 205/265 (77%), Gaps = 12/265 (4%)
Query: 2 ATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFS 61
+++T+ + F+G+ + P + ++ G SK WYGPDRVKYLGPFS
Sbjct: 9 SSATVVKQTPFLGQRKSANPLRDVVAMGT--------SKFTMGNDLWYGPDRVKYLGPFS 60
Query: 62 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-N 120
+ PSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L +
Sbjct: 61 AQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLQKWV 120
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP- 179
V F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ Q+VLMG VEG+RI G P
Sbjct: 121 RVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQIVLMGLVEGFRINGLPD 180
Query: 180 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
+GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 VGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
Query: 239 ENLADHLADPVNNNAWAYATNFVPG 263
ENL DHL +PV NNAW YAT FVPG
Sbjct: 240 ENLLDHLDNPVANNAWVYATKFVPG 264
>gi|414887113|tpg|DAA63127.1| TPA: chlorophyll a-b binding protein of LHCII type III isoform 1
[Zea mays]
gi|414887114|tpg|DAA63128.1| TPA: chlorophyll a-b binding protein of LHCII type III isoform 2
[Zea mays]
Length = 269
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/269 (67%), Positives = 201/269 (74%), Gaps = 7/269 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGG---RISMRKTGSKSVSSGSPWYGPDRVKYL 57
MA++ MA +S V G +N ++ G + WYGPDRVKYL
Sbjct: 1 MASTIMAATSRIVAAKTPFLGQGRAAANASPLRDVAAAAAGGRITMGNDLWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct: 61 GPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVL 120
Query: 118 AR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
+ V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG VEG+RI
Sbjct: 121 EKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRIN 180
Query: 177 G-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
G +GE + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 181 GLDGVGEGNN-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 239
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPG 263
KGPLENL DHL DPV NNAW YAT F PG
Sbjct: 240 KGPLENLLDHLDDPVANNAWVYATKFAPG 268
>gi|359495476|ref|XP_002274150.2| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Vitis vinifera]
gi|147801944|emb|CAN77327.1| hypothetical protein VITISV_001096 [Vitis vinifera]
Length = 269
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 177/219 (80%), Positives = 187/219 (85%), Gaps = 4/219 (1%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 51 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 110
Query: 108 ALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
A GC+ PE+L + V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QVVL
Sbjct: 111 AFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 170
Query: 167 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
MG VEGYRI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 171 MGLVEGYRINGLPGVGEGND-LYPGGPYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 229
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
GFFVQAIVTGKGPLENL DHL +PV NNAWAYAT FVPG
Sbjct: 230 GFFVQAIVTGKGPLENLLDHLDNPVANNAWAYATKFVPG 268
>gi|359495474|ref|XP_003634999.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Vitis vinifera]
Length = 269
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 177/219 (80%), Positives = 187/219 (85%), Gaps = 4/219 (1%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 51 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 110
Query: 108 ALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
A GC+ PE+L + V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QVVL
Sbjct: 111 AFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 170
Query: 167 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
MG VEGYRI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 171 MGLVEGYRINGLPGVGEGND-LYPGGPYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 229
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
GFFVQAIVTGKGPLENL DHL +PV NNAWAYAT FVPG
Sbjct: 230 GFFVQAIVTGKGPLENLLDHLDNPVANNAWAYATKFVPG 268
>gi|115793|sp|P27523.1|CB23_HORVU RecName: Full=Chlorophyll a-b binding protein of LHCII type III,
chloroplastic; Short=CAB; Flags: Precursor
gi|19023|emb|CAA44881.1| type III LHCII CAB precursor protein [Hordeum vulgare]
Length = 268
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/268 (69%), Positives = 208/268 (77%), Gaps = 6/268 (2%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSP-WYGPDRVKYLG 58
MA++ MA +S + V K L+ G S + + ++ G+ WYGPDRVKYLG
Sbjct: 1 MASTIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFS + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFPE+L
Sbjct: 61 PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQ 120
Query: 119 R-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
+ GV+F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG VEG+RI G
Sbjct: 121 KWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRING 180
Query: 178 -GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
+GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 LDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPG 263
GPLENL DHL DPV NNAW +AT F PG
Sbjct: 240 GPLENLFDHLDDPVANNAWVFATKFAPG 267
>gi|125558806|gb|EAZ04342.1| hypothetical protein OsI_26482 [Oryza sativa Indica Group]
Length = 266
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/270 (69%), Positives = 206/270 (76%), Gaps = 12/270 (4%)
Query: 1 MATSTMALSSSFVGKAVNL----APSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKY 56
MA++ MA +S + PS L + I+ TG ++S WYGPDRVKY
Sbjct: 1 MASTIMAPTSRVLAAKTPFLGHPRPSNAPLRD---IAAAATGRITMSK-ELWYGPDRVKY 56
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGPFS + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+
Sbjct: 57 LGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEV 116
Query: 117 LAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
L + V F E VWFKAGAQIFS+GGLDYLGNP+L+HAQSILA+ QVVLMG VEGYRI
Sbjct: 117 LEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYRI 176
Query: 176 AGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 233
G P +G+ D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVT
Sbjct: 177 NGLPGVGDGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 235
Query: 234 GKGPLENLADHLADPVNNNAWAYATNFVPG 263
GKGPLENL DHLADPV NNAW YAT F PG
Sbjct: 236 GKGPLENLLDHLADPVANNAWVYATKFTPG 265
>gi|115472785|ref|NP_001059991.1| Os07g0562700 [Oryza sativa Japonica Group]
gi|34393384|dbj|BAC83393.1| putative chlorophyll A-B binding protein of LHCII type III,
chloroplast precursor (CAB) [Oryza sativa Japonica
Group]
gi|113611527|dbj|BAF21905.1| Os07g0562700 [Oryza sativa Japonica Group]
gi|125600722|gb|EAZ40298.1| hypothetical protein OsJ_24743 [Oryza sativa Japonica Group]
gi|215678934|dbj|BAG96364.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679381|dbj|BAG96521.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692555|dbj|BAG87975.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737394|dbj|BAG96323.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737576|dbj|BAG96706.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737599|dbj|BAG96729.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767446|dbj|BAG99674.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767453|dbj|BAG99681.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 266
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/237 (75%), Positives = 192/237 (81%), Gaps = 13/237 (5%)
Query: 30 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 89
GRI+M K WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE
Sbjct: 39 GRITMSK---------ELWYGPDRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEA 89
Query: 90 FAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNP 148
FA+NR LEVIH RWAMLGALGC+ PE+L + V F E VWFKAGAQIFS+GGLDYLGNP
Sbjct: 90 FARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNP 149
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFA 206
+L+HAQSILA+ QVVLMG VEGYRI G P +G+ D LYPGG FDPLGLADDP FA
Sbjct: 150 NLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGDGND-LYPGGQYFDPLGLADDPVTFA 208
Query: 207 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHLADPV NNAW YAT F PG
Sbjct: 209 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLADPVANNAWVYATKFTPG 265
>gi|242045970|ref|XP_002460856.1| hypothetical protein SORBIDRAFT_02g036380 [Sorghum bicolor]
gi|241924233|gb|EER97377.1| hypothetical protein SORBIDRAFT_02g036380 [Sorghum bicolor]
Length = 268
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/268 (68%), Positives = 204/268 (76%), Gaps = 6/268 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRI-SMRKTGSKSVSSGSP-WYGPDRVKYLG 58
MA++ MA +S V G +N + + S ++ G+ WYGPDRVKYLG
Sbjct: 1 MASTIMAATSRVVAAKTPFLGQGRAAANASPLRDVAAAASGRITMGNDLWYGPDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct: 61 PFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLE 120
Query: 119 R-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
+ V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG VEG+RI G
Sbjct: 121 KWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRING 180
Query: 178 -GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
+GE + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 LDGVGEGNN-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPG 263
GPLENL DHL DPV NNAW YAT F PG
Sbjct: 240 GPLENLLDHLDDPVANNAWVYATKFAPG 267
>gi|359806176|ref|NP_001241200.1| uncharacterized protein LOC100790960 [Glycine max]
gi|255635333|gb|ACU18020.1| unknown [Glycine max]
Length = 267
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 185/267 (69%), Positives = 202/267 (75%), Gaps = 5/267 (1%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSP-WYGPDRVKYLGP 59
MA + MA +SS KA G + + G+ + G+ WYGPDRVKYLGP
Sbjct: 1 MAATLMAATSSGTLKATPFLGQGKGANANALRDVVSMGTGKYTMGNDLWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FS + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L +
Sbjct: 61 FSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEK 120
Query: 120 -NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG- 177
V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG VEGYRI G
Sbjct: 121 WLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGYRINGL 180
Query: 178 GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
+GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 DGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 239
Query: 237 PLENLADHLADPVNNNAWAYATNFVPG 263
PLENL DHL +PV NNAW YAT F PG
Sbjct: 240 PLENLLDHLDNPVANNAWVYATKFAPG 266
>gi|87313231|gb|ABD37913.1| light-harvesting chlorophyll-a/b binding protein LhcbM8
[Chlamydomonas incerta]
Length = 245
Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 169/221 (76%), Positives = 191/221 (86%), Gaps = 1/221 (0%)
Query: 43 SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 101
SSG +YGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH
Sbjct: 23 SSGVEFYGPNRAKWLGPYSENSTPAYLTGEFPGDYGWDTAGLSADPETFQRYRELELIHA 82
Query: 102 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 161
RWAMLGALG V PELLA+NGV FGEAVWFKAGAQIF EGGL+YLGNPSLIHAQ+I+A A
Sbjct: 83 RWAMLGALGIVTPELLAKNGVPFGEAVWFKAGAQIFQEGGLNYLGNPSLIHAQNIVATLA 142
Query: 162 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 221
QV+L+G VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMF
Sbjct: 143 VQVILLGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMF 202
Query: 222 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
S FGFFVQAIVTGKGP++NL DHL++P NNA+A+AT + P
Sbjct: 203 SSFGFFVQAIVTGKGPIQNLDDHLSNPGVNNAFAFATKYTP 243
>gi|156890566|gb|ABU96693.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 267
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 186/276 (67%), Positives = 207/276 (75%), Gaps = 23/276 (8%)
Query: 1 MATSTMALSSSFV---------GKAVNLAPSGN-ELSNGGRISMRKTGSKSVSSGSPWYG 50
MA++ MA +S V G+A N +P + + GRI+M S WYG
Sbjct: 1 MASTIMAATSRVVAAKTPFLGQGRAANASPLRDVAAAANGRITM---------SNDLWYG 51
Query: 51 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
PDR+KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALG
Sbjct: 52 PDRLKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALG 111
Query: 111 CVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
C+ PE+L + V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG
Sbjct: 112 CITPEVLQKWVRVSFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGL 171
Query: 170 VEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 227
VEGYRI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF FF
Sbjct: 172 VEGYRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFRFF 230
Query: 228 VQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
VQAIVTGKG LENL DH+ +PV NNAW YAT F PG
Sbjct: 231 VQAIVTGKGSLENLLDHIDNPVANNAWVYATKFAPG 266
>gi|3928891|gb|AAC79711.1| chlorophyll a/b binding protein [Acetabularia acetabulum]
Length = 251
Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 167/224 (74%), Positives = 189/224 (84%), Gaps = 2/224 (0%)
Query: 41 SVSSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 99
SV + WYGPDR K+LGP+S G PSYLTGEFPGDYGWDTAGLSADPETF K RE E+I
Sbjct: 26 SVQAAVEWYGPDRAKWLGPYSDGAVPSYLTGEFPGDYGWDTAGLSADPETFKKYRETELI 85
Query: 100 HCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILA 158
H RWAMLGALGCV PE+LA+ G FGE+VWF+AGAQIF +GGLDYLG+P+LIHAQSI A
Sbjct: 86 HARWAMLGALGCVTPEILAKYGGTSFGESVWFRAGAQIFKDGGLDYLGSPALIHAQSIGA 145
Query: 159 IWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRL 218
I QV+LMG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELK+KEIKNGRL
Sbjct: 146 IVISQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKIKEIKNGRL 205
Query: 219 AMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
AMFSMFGF+VQAIVTGKGP+EN A+H+ADP NA++YAT F P
Sbjct: 206 AMFSMFGFYVQAIVTGKGPVENWAEHIADPFTANAFSYATKFTP 249
>gi|56809383|gb|AAW31513.1| light-harvesting chlorophyll-a/b binding protein Lhcb3 [Pisum
sativum]
Length = 265
Score = 346 bits (888), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 175/219 (79%), Positives = 187/219 (85%), Gaps = 4/219 (1%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLG
Sbjct: 47 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 106
Query: 108 ALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
ALGC+ PE+L + V F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ Q+VL
Sbjct: 107 ALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQIVL 166
Query: 167 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
MG VEG+RI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 167 MGLVEGFRINGLPDVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 225
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
GFFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 226 GFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 264
>gi|145079419|tpg|DAA05914.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm2 [Acetabularia acetabulum]
Length = 248
Score = 346 bits (887), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 175/259 (67%), Positives = 202/259 (77%), Gaps = 16/259 (6%)
Query: 7 ALSSSFVGKAV-NLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFS-GEP 64
A+ +S VG + P GN+ R+S V + WYGPDR K+LGP+S G
Sbjct: 1 AVQTSLVGTTTKSTLPKGNK-----RVS--------VQAAVEWYGPDRAKWLGPYSDGAV 47
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVK 123
PSYLTGEFPGDYGWDTAGLSADPETF K RE E+IH RWAMLGALGCV PE+LA+ G
Sbjct: 48 PSYLTGEFPGDYGWDTAGLSADPETFKKYRETELIHARWAMLGALGCVTPEILAKYGGTS 107
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 183
FGE+VWF+AGAQIF +GGLDYLG+P+LIHAQSI AI QV+LMG +EGYR+ GGP GE
Sbjct: 108 FGESVWFRAGAQIFKDGGLDYLGSPALIHAQSIGAIVISQVILMGLIEGYRVNGGPAGEG 167
Query: 184 TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 243
DPLYPG SFDPLGLADDP+ FAELK+KEIKNGRLAMFSMFGF+VQAIVTGKGP+EN A+
Sbjct: 168 LDPLYPGESFDPLGLADDPDTFAELKIKEIKNGRLAMFSMFGFYVQAIVTGKGPVENWAE 227
Query: 244 HLADPVNNNAWAYATNFVP 262
H+ADP NA++YAT F P
Sbjct: 228 HVADPFTANAFSYATKFTP 246
>gi|145079437|tpg|DAA05915.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm7 [Acetabularia acetabulum]
Length = 244
Score = 346 bits (887), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 167/217 (76%), Positives = 186/217 (85%), Gaps = 2/217 (0%)
Query: 48 WYGPDRVKYLGPF-SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
WYGPDR K+LGPF G+ PSYLTGEFPGDYGWDTAGLSADPETF RE E+IH RWAML
Sbjct: 27 WYGPDRAKWLGPFFEGDVPSYLTGEFPGDYGWDTAGLSADPETFKAYREQELIHARWAML 86
Query: 107 GALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 165
GALGCV PE+L++ GV GE+VWFKAG+QIF EGGLDYLGNPSL+HAQSILAI CQVV
Sbjct: 87 GALGCVTPEILSKYAGVSLGESVWFKAGSQIFQEGGLDYLGNPSLVHAQSILAILGCQVV 146
Query: 166 LMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
LMG +E YR+ GGPLG+ D L+PG FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFG
Sbjct: 147 LMGLIEAYRVNGGPLGKGLDVLHPGEKFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFG 206
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
F+VQAIVTGKGP+EN A+H+ADP + NAW YAT FVP
Sbjct: 207 FYVQAIVTGKGPIENWAEHVADPFSVNAWNYATKFVP 243
>gi|118489712|gb|ABK96657.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 224
Score = 345 bits (886), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 177/219 (80%), Positives = 187/219 (85%), Gaps = 4/219 (1%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLG
Sbjct: 6 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 65
Query: 108 ALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
ALGC+ PE+L + V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QVVL
Sbjct: 66 ALGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 125
Query: 167 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
MG VEG+RI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 126 MGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMF 184
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
GFFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 185 GFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 223
>gi|6644196|gb|AAF20948.1|AF207690_1 chlorophyll a/b-binding protein [Daucus carota]
Length = 264
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 184/268 (68%), Positives = 206/268 (76%), Gaps = 16/268 (5%)
Query: 2 ATSTMALSSSFVG--KAVNLAPSGNELSNG-GRISMRKTGSKSVSSGSPWYGPDRVKYLG 58
++ST+ ++ F+G KA N P + +S G G+ +M WYGPDRVKYLG
Sbjct: 6 SSSTVVRATPFLGLTKATNANPLRDVVSMGPGKFTM---------GSDLWYGPDRVKYLG 56
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFS + PSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGA GC+ PE+L
Sbjct: 57 PFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLE 116
Query: 119 R-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
+ V F E VWFKAG+QIF+EGGLDYLGNP+L+HAQSILA+ QVVLMG VE +RI G
Sbjct: 117 KWVKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVESFRING 176
Query: 178 GP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
P +GE D LYPGG FDPLGLADDP AELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 177 LPGVGEGND-LYPGGQYFDPLGLADDPVTLAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPG 263
GPLENL DHL +PV NNAW YAT FVPG
Sbjct: 236 GPLENLLDHLDNPVANNAWVYATKFVPG 263
>gi|159484394|ref|XP_001700243.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|158272559|gb|EDO98358.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 266
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 167/214 (78%), Positives = 185/214 (86%), Gaps = 3/214 (1%)
Query: 31 RISMRKT---GSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 87
++ R+T SK+ + S WYGP+R +LG F+GEPPSYLTGEFPGDYGWDTAGLSADP
Sbjct: 21 KVEARRTVKPASKASTPDSFWYGPERPLFLGAFTGEPPSYLTGEFPGDYGWDTAGLSADP 80
Query: 88 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGN 147
ETF + RELE+IH RWAMLGALGC+FPELL GV FGEAVWFKAGAQIF EGGLDYLGN
Sbjct: 81 ETFKRYRELELIHARWAMLGALGCIFPELLGSYGVPFGEAVWFKAGAQIFQEGGLDYLGN 140
Query: 148 PSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAE 207
P+L+HAQSILAI QV+LMGA+EGYR+ GGPLGE D LYPGGSFDPLGLADDP+ FAE
Sbjct: 141 PNLVHAQSILAILGTQVLLMGAIEGYRVNGGPLGEGLDKLYPGGSFDPLGLADDPDTFAE 200
Query: 208 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL+NL
Sbjct: 201 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLQNL 234
>gi|87313181|gb|ABD37887.1| light-harvesting chlorophyll-a/b binding protein LhcbM3 [Mesostigma
viride]
gi|87313183|gb|ABD37888.1| light-harvesting chlorophyll-a/b binding protein LhcbM5 [Mesostigma
viride]
gi|87313185|gb|ABD37889.1| light-harvesting chlorophyll-a/b binding protein LhcbM4 [Mesostigma
viride]
gi|145079700|tpg|DAA05924.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm4 [Mesostigma viride]
gi|145079723|tpg|DAA05925.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm2 [Mesostigma viride]
gi|145079757|tpg|DAA05931.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm3 [Mesostigma viride]
Length = 267
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 168/252 (66%), Positives = 199/252 (78%), Gaps = 3/252 (1%)
Query: 9 SSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYL 68
SS+F+G AV +AP+ + + +KS + SP+YGPDRV +LGPF+ + PSYL
Sbjct: 7 SSTFLGAAV-VAPAQKAEAKKINTVVEARRTKSATPDSPFYGPDRVTFLGPFT-DVPSYL 64
Query: 69 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEA 127
TGE+PGDYGWDT GLSADPETFA RE+E++H RWAMLG LGC PE L + +G+ FGE+
Sbjct: 65 TGEYPGDYGWDTVGLSADPETFAAYREIELMHARWAMLGTLGCFLPEALEKYSGINFGES 124
Query: 128 VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL 187
VWFKAG QIF EGGLDYLGNPSL+HAQSI+A Q +LMG VEGYR+ GGPLGE D +
Sbjct: 125 VWFKAGGQIFQEGGLDYLGNPSLVHAQSIIATVFIQALLMGLVEGYRVGGGPLGEAGDKM 184
Query: 188 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 247
YPGGSFDPLGL DDP+ AELKVKEIKNGRLAMFSMFG+F+QAIVTGKGP+ENL HLAD
Sbjct: 185 YPGGSFDPLGLGDDPDTLAELKVKEIKNGRLAMFSMFGYFIQAIVTGKGPVENLDAHLAD 244
Query: 248 PVNNNAWAYATN 259
P NN +AYAT+
Sbjct: 245 PFVNNGFAYATS 256
>gi|87313205|gb|ABD37899.1| light-harvesting chlorophyll-a/b binding protein LhcbM2
[Acutodesmus obliquus]
Length = 249
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 169/221 (76%), Positives = 186/221 (84%), Gaps = 4/221 (1%)
Query: 48 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
WYGPDR K+LGPFS G+ P+YLTGEF GDYGWDTAGLSADP+TFAK RE+EVIH RWAML
Sbjct: 29 WYGPDRPKFLGPFSEGDTPAYLTGEFAGDYGWDTAGLSADPQTFAKYREIEVIHARWAML 88
Query: 107 GALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
GALGC+ PELLA+NGV FGEAVWFKAGAQIF +GGL+YLGN +L+HAQSILA A QV+L
Sbjct: 89 GALGCITPELLAKNGVPFGEAVWFKAGAQIFQDGGLNYLGNENLVHAQSILATLAVQVLL 148
Query: 167 MGAVEGYRIAGGP---LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
MGA E YR GG GE D LYPGG+FDPLGLADDP+ AELKVKEIKNGRLAMFSM
Sbjct: 149 MGAAESYRANGGAPGGFGEDLDSLYPGGAFDPLGLADDPDTLAELKVKEIKNGRLAMFSM 208
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
FGFFVQAIVTG+GP+ NL HL+DP NNAW YAT FVPG
Sbjct: 209 FGFFVQAIVTGQGPIANLDAHLSDPSGNNAWNYATKFVPGN 249
>gi|159474706|ref|XP_001695466.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|19423287|gb|AAL88457.1|AF479778_1 major light-harvesting complex II protein m9 [Chlamydomonas
reinhardtii]
gi|158275949|gb|EDP01724.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 254
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 166/216 (76%), Positives = 188/216 (87%), Gaps = 1/216 (0%)
Query: 48 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
+YGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAML
Sbjct: 37 FYGPNRAKWLGPYSENSTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 96
Query: 107 GALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
GALG V PELL +NGV+FGEAVWFKAGAQIF EGGL+YLGNPSLIHAQ+I+A A QVVL
Sbjct: 97 GALGIVTPELLQKNGVQFGEAVWFKAGAQIFQEGGLNYLGNPSLIHAQNIVATLAVQVVL 156
Query: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
+G VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFS FGF
Sbjct: 157 LGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSSFGF 216
Query: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
FVQAIVTGKGP++NL DHL++P NNA+A+AT + P
Sbjct: 217 FVQAIVTGKGPIQNLDDHLSNPGVNNAFAFATKYTP 252
>gi|87313177|gb|ABD37885.1| light-harvesting chlorophyll-a/b binding protein LhcbM1 [Mesostigma
viride]
gi|87313179|gb|ABD37886.1| light-harvesting chlorophyll-a/b binding protein LhcbM2 [Mesostigma
viride]
gi|145079623|tpg|DAA05921.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm1 [Mesostigma viride]
Length = 267
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/252 (66%), Positives = 199/252 (78%), Gaps = 3/252 (1%)
Query: 9 SSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYL 68
SS+F+G AV +AP+ + + +KS + SP+YGPDRV +LGPF+ + PSYL
Sbjct: 7 SSTFLGAAV-VAPAQKVEAKKINTVVEARRTKSATPDSPFYGPDRVTFLGPFT-DVPSYL 64
Query: 69 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEA 127
TGE+PGDYGWDT GLSADPETFA RE+E++H RWAMLG LGC PE L + +G+ FGE+
Sbjct: 65 TGEYPGDYGWDTVGLSADPETFAAYREIELMHARWAMLGTLGCFLPEALEKYSGINFGES 124
Query: 128 VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL 187
VWFKAG QIF EGGLDYLGNPSL+HAQSI+A Q +LMG VEGYR+ GGPLGE D +
Sbjct: 125 VWFKAGGQIFQEGGLDYLGNPSLVHAQSIIATVFIQALLMGLVEGYRVGGGPLGEAGDKM 184
Query: 188 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 247
YPGGSFDPLGL DDP+ AELKVKEIKNGRLAMFSMFG+F+QAIVTGKGP+ENL HLAD
Sbjct: 185 YPGGSFDPLGLGDDPDTLAELKVKEIKNGRLAMFSMFGYFIQAIVTGKGPVENLDAHLAD 244
Query: 248 PVNNNAWAYATN 259
P NN +AYAT+
Sbjct: 245 PFVNNGFAYATS 256
>gi|374434016|gb|AEZ52400.1| LHCII type III chlorophyll a/b binding protein [Wolffia
australiana]
Length = 264
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/266 (68%), Positives = 201/266 (75%), Gaps = 6/266 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
MA + A S+ V K L + + S+ R + K S WYGPDRVKYLGPF
Sbjct: 1 MAATVTAAGSATVLKTRFLGQTRS--SSALRDVVAMGNGKFTMSNELWYGPDRVKYLGPF 58
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR- 119
S + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L +
Sbjct: 59 SAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKW 118
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-G 178
V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG VEG+RI G
Sbjct: 119 VKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLD 178
Query: 179 PLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
+GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFF+QAIVTGKGP
Sbjct: 179 GVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFIQAIVTGKGP 237
Query: 238 LENLADHLADPVNNNAWAYATNFVPG 263
LENL DHL DPV NNAW YAT F PG
Sbjct: 238 LENLLDHLDDPVANNAWVYATKFAPG 263
>gi|307106007|gb|EFN54254.1| hypothetical protein CHLNCDRAFT_59709 [Chlorella variabilis]
Length = 243
Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 160/220 (72%), Positives = 184/220 (83%), Gaps = 1/220 (0%)
Query: 36 KTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 95
+ + + + +YGPDRVK+LGPFSG PSYL GE+PGDYGWDTAGLSADPETF++ RE
Sbjct: 16 RATRQVTRASAEFYGPDRVKFLGPFSGATPSYLKGEYPGDYGWDTAGLSADPETFSRYRE 75
Query: 96 LEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
LEVIH RWAMLGALGCV PELL +NG FGEAVWFKAGAQIF +GGLDYLGN +L+HAQ
Sbjct: 76 LEVIHARWAMLGALGCVTPELLQKNGAANFGEAVWFKAGAQIFQDGGLDYLGNANLVHAQ 135
Query: 155 SILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 214
SI+A+ Q+VLMG +EGYR+ GGP GE+TDP+YPG +FDPLGLADDP+ AELKVKEIK
Sbjct: 136 SIVAVLLTQIVLMGLIEGYRVNGGPAGEITDPIYPGEAFDPLGLADDPDTLAELKVKEIK 195
Query: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 254
NGRLAM SMFGFF+QAIVTGKGP+ENL DHLA P N W
Sbjct: 196 NGRLAMVSMFGFFIQAIVTGKGPIENLNDHLAAPGETNFW 235
>gi|255569585|ref|XP_002525758.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223534908|gb|EEF36594.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 268
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 184/268 (68%), Positives = 202/268 (75%), Gaps = 6/268 (2%)
Query: 1 MATSTMAL--SSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLG 58
MA++ MA SSS V + +N + + K + WYGPDRVKYLG
Sbjct: 1 MASTVMAATASSSSVLRPTPFLGQRGSSANPLKDVVSMGNGKYIMGNELWYGPDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFS + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct: 61 PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLE 120
Query: 119 R-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
+ V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QVVLMG VEG+RI G
Sbjct: 121 KWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRING 180
Query: 178 GP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 LPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPG 263
GPLENL DHL +PV NNAW YAT F PG
Sbjct: 240 GPLENLLDHLDNPVANNAWVYATKFSPG 267
>gi|226509520|ref|NP_001150523.1| chlorophyll a-b binding protein of LHCII type III [Zea mays]
gi|195613464|gb|ACG28562.1| chlorophyll a-b binding protein of LHCII type III [Zea mays]
gi|195639878|gb|ACG39407.1| chlorophyll a-b binding protein of LHCII type III [Zea mays]
Length = 272
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 178/238 (74%), Positives = 191/238 (80%), Gaps = 13/238 (5%)
Query: 29 GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 88
GGRI+M WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 44 GGRITM---------GNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPE 94
Query: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGN 147
FA+NR LEVIH RWAMLGALGC+ PE+L + V F E VWFKAGAQIFSEGGLDYLGN
Sbjct: 95 AFARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGN 154
Query: 148 PSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAF 205
P+L+HAQSILA+ QV+LMG VEG+RI G +GE + LYPGG FDPLGLADDP F
Sbjct: 155 PNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNN-LYPGGQYFDPLGLADDPVTF 213
Query: 206 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL DPV NNAW YAT F PG
Sbjct: 214 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPG 271
>gi|384252962|gb|EIE26437.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
Length = 245
Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 171/233 (73%), Positives = 190/233 (81%), Gaps = 3/233 (1%)
Query: 32 ISMRKTGSKSVSSGS-PWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF 90
+ + G+K V+ + +YGPDR +LGPF+ E PSYL GEFPGDYGWDTAGLSADPETF
Sbjct: 14 VPTKGQGNKQVTRAAIEFYGPDRAGFLGPFT-ESPSYLKGEFPGDYGWDTAGLSADPETF 72
Query: 91 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 150
A+ RE+EVIH RWAMLGALGCV PELLA+NGV FGEAVWFKAGAQIF GL+YLGNPSL
Sbjct: 73 ARYREIEVIHARWAMLGALGCVTPELLAKNGVSFGEAVWFKAGAQIFGSDGLNYLGNPSL 132
Query: 151 IHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELK 209
+HAQSI+A ACQV+LMG E YR G GP E D LYPGG FDPLGLADDP+ FAELK
Sbjct: 133 VHAQSIIATLACQVILMGGAEAYRANGEGPGVEGLDSLYPGGPFDPLGLADDPDTFAELK 192
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
KEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP NN +A AT F P
Sbjct: 193 TKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPGVNNGFAAATKFAP 245
>gi|225461315|ref|XP_002284493.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Vitis vinifera]
Length = 266
Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 172/218 (78%), Positives = 184/218 (84%), Gaps = 2/218 (0%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 48 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 107
Query: 108 ALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
ALGC+ PE+L + V F E +WFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QVVL
Sbjct: 108 ALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 167
Query: 167 MGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
MG VEG+RI G P + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFG
Sbjct: 168 MGLVEGFRINGLPGVGDGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFG 227
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
FFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 228 FFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 265
>gi|169124051|gb|ACA47401.1| chloroplast chlorophyll-a/b binding protein [Medicago falcata]
Length = 266
Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 174/219 (79%), Positives = 187/219 (85%), Gaps = 4/219 (1%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLG
Sbjct: 48 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 107
Query: 108 ALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
ALGC+ PE+L + V F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QVVL
Sbjct: 108 ALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 167
Query: 167 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
MG VEG+RI G P +GE + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 168 MGLVEGFRINGLPGVGEGNN-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 226
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
GFFVQAIVTGKGPLENL DH+ +PV NNAW YAT FVPG
Sbjct: 227 GFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFVPG 265
>gi|312281753|dbj|BAJ33742.1| unnamed protein product [Thellungiella halophila]
Length = 265
Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 178/233 (76%), Positives = 192/233 (82%), Gaps = 12/233 (5%)
Query: 42 VSSGSP--------WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 93
VS GSP WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FAKN
Sbjct: 33 VSLGSPKYTMGNDLWYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKN 92
Query: 94 RELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIH 152
R LEVIH RWAMLGA GC+ PE+L + V+F E VWFKAG+QIFSEGGLDYLGNP+L+H
Sbjct: 93 RALEVIHGRWAMLGAFGCITPEVLQKWVRVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVH 152
Query: 153 AQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKV 210
AQSILA+ QV+LMG VEG+RI G +GE D LYPGG FDPLGLADDP FAELKV
Sbjct: 153 AQSILAVLGFQVILMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKV 211
Query: 211 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
KEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DH+ DPV NNAWA+AT FVPG
Sbjct: 212 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDDPVANNAWAFATKFVPG 264
>gi|357452427|ref|XP_003596490.1| Chlorophyll a/b-binding protein [Medicago truncatula]
gi|355485538|gb|AES66741.1| Chlorophyll a/b-binding protein [Medicago truncatula]
Length = 264
Score = 343 bits (879), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 174/219 (79%), Positives = 187/219 (85%), Gaps = 4/219 (1%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLG
Sbjct: 46 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 105
Query: 108 ALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
ALGC+ PE+L + V F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QVVL
Sbjct: 106 ALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 165
Query: 167 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
MG VEG+RI G P +GE + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 166 MGLVEGFRINGLPGVGEGNN-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 224
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
GFFVQAIVTGKGPLENL DH+ +PV NNAW YAT FVPG
Sbjct: 225 GFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFVPG 263
>gi|388520661|gb|AFK48392.1| unknown [Lotus japonicus]
Length = 270
Score = 343 bits (879), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 174/219 (79%), Positives = 186/219 (84%), Gaps = 4/219 (1%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLG
Sbjct: 52 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 111
Query: 108 ALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
ALGC+ PE+L + V F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QV+L
Sbjct: 112 ALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLL 171
Query: 167 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
MG VEG+RI G P +GE + LYPG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 172 MGLVEGFRINGLPGVGEGNN-LYPGDQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMF 230
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
GFFVQAIVTGKGPLENL DHL DPV NNAW YAT FVPG
Sbjct: 231 GFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFVPG 269
>gi|359807444|ref|NP_001240880.1| uncharacterized protein LOC100779387 [Glycine max]
gi|255646132|gb|ACU23552.1| unknown [Glycine max]
Length = 268
Score = 342 bits (878), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 184/266 (69%), Positives = 200/266 (75%), Gaps = 5/266 (1%)
Query: 2 ATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSP-WYGPDRVKYLGPF 60
AT A +SS KA G + + G+ + G+ WYGPDRVKYLGPF
Sbjct: 3 ATLMAATTSSGTLKATPFLGQGKGANANALRDVVSMGTGKYTMGNDLWYGPDRVKYLGPF 62
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR- 119
S + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L +
Sbjct: 63 SAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW 122
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-G 178
V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG VEGYRI G
Sbjct: 123 LRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGYRINGLD 182
Query: 179 PLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
+GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 183 GVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 241
Query: 238 LENLADHLADPVNNNAWAYATNFVPG 263
LENL DHL +PV NNAW YAT F PG
Sbjct: 242 LENLLDHLDNPVANNAWVYATKFSPG 267
>gi|384253398|gb|EIE26873.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
Length = 250
Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/227 (74%), Positives = 189/227 (83%), Gaps = 3/227 (1%)
Query: 38 GSKSVSSGS-PWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
G++ V+ + +YGPDR +LGPF+ + PSYL GEFPGDYGWDTAGLSADPETFA+ RE+
Sbjct: 25 GNRQVTRAAIEFYGPDRATFLGPFT-DTPSYLNGEFPGDYGWDTAGLSADPETFARYREI 83
Query: 97 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 156
EVIH RWAMLGALGCV PELLA+NGV FGEAVWFKAGAQIF GL+YLGN SL+HAQSI
Sbjct: 84 EVIHARWAMLGALGCVTPELLAKNGVSFGEAVWFKAGAQIFGSDGLNYLGNSSLVHAQSI 143
Query: 157 LAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 215
+A ACQV+LMG E YR AG GP E D LYPGG FDPLGLADDP+ F+ELKVKEIKN
Sbjct: 144 IATLACQVILMGGAEAYRAAGEGPGLEGLDSLYPGGPFDPLGLADDPDTFSELKVKEIKN 203
Query: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
GRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP NN +A AT F P
Sbjct: 204 GRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPGVNNGFAAATKFAP 250
>gi|4689380|gb|AAD27877.1|AF139465_1 LHCII type III chlorophyll a/b binding protein [Vigna radiata]
Length = 269
Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 184/254 (72%), Positives = 198/254 (77%), Gaps = 14/254 (5%)
Query: 14 GKAVNLAPSGNELSNG-GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 72
GKA N P + +S G G+ SM S WYGPDRVKYLGPFS + PSYL GEF
Sbjct: 25 GKASNGNPLRDVVSMGSGKYSM---------SNELWYGPDRVKYLGPFSAQTPSYLKGEF 75
Query: 73 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFK 131
PGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L + V F E VWFK
Sbjct: 76 PGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFK 135
Query: 132 AGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPG 190
AGAQIFSEGGLDYLGNP+L+HAQSILA+ QVVLMG VEG+RI G +GE + LYPG
Sbjct: 136 AGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNN-LYPG 194
Query: 191 GS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 249
G FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV
Sbjct: 195 GQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPV 254
Query: 250 NNNAWAYATNFVPG 263
NNAW YAT F PG
Sbjct: 255 ANNAWVYATKFAPG 268
>gi|302143082|emb|CBI20377.3| unnamed protein product [Vitis vinifera]
Length = 231
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/218 (78%), Positives = 184/218 (84%), Gaps = 2/218 (0%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 13 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 72
Query: 108 ALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
ALGC+ PE+L + V F E +WFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QVVL
Sbjct: 73 ALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 132
Query: 167 MGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
MG VEG+RI G P + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFG
Sbjct: 133 MGLVEGFRINGLPGVGDGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFG 192
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
FFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 193 FFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 230
>gi|297792877|ref|XP_002864323.1| light-harvesting chlorophyll binding protein 3 [Arabidopsis lyrata
subsp. lyrata]
gi|297310158|gb|EFH40582.1| light-harvesting chlorophyll binding protein 3 [Arabidopsis lyrata
subsp. lyrata]
Length = 265
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/263 (68%), Positives = 197/263 (74%), Gaps = 4/263 (1%)
Query: 4 STMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGE 63
ST SSS + L + N R + K WYGPDRVKYLGPFS +
Sbjct: 3 STFTSSSSVLSPTTFLGQTKASSFNPLRDVVSLGSPKYTMGNDLWYGPDRVKYLGPFSVQ 62
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGV 122
PSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGA GC+ PE+L + V
Sbjct: 63 TPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLQKWVRV 122
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLG 181
F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG VEG+RI G +G
Sbjct: 123 DFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVG 182
Query: 182 EVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
E D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 183 EGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 241
Query: 241 LADHLADPVNNNAWAYATNFVPG 263
L DHL +PV NNAWA+AT F PG
Sbjct: 242 LLDHLDNPVANNAWAFATKFAPG 264
>gi|449463148|ref|XP_004149296.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Cucumis sativus]
gi|449532805|ref|XP_004173369.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Cucumis sativus]
Length = 264
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/227 (77%), Positives = 186/227 (81%), Gaps = 4/227 (1%)
Query: 40 KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 99
K S WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVI
Sbjct: 38 KYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVI 97
Query: 100 HCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILA 158
H RWAMLGALGC+ PE+L + V F E VWFKAG+QIF+EGGLDYLGNP+L+HAQSILA
Sbjct: 98 HGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILA 157
Query: 159 IWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNG 216
+ QVVLMG VEG+RI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNG
Sbjct: 158 VLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNG 216
Query: 217 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
RLAMFSMFGFFVQAIVTGKGPLENL DHL DPV NNAW YAT F PG
Sbjct: 217 RLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPG 263
>gi|371721828|gb|AEX55237.1| chloroplast chlorophyll a/b binding protein cab-BO3 [Allium
sativum]
Length = 261
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/219 (78%), Positives = 185/219 (84%), Gaps = 4/219 (1%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 43 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 102
Query: 108 ALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
ALGC+ PE+L + V F E VWFKAGAQIFS+GGLDYLGNP+L+HAQSILA+ QV+L
Sbjct: 103 ALGCITPEVLQKWVNVNFKEPVWFKAGAQIFSQGGLDYLGNPNLVHAQSILAVLGFQVLL 162
Query: 167 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
MGAVEG+RI G +G D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 163 MGAVEGFRINGLDGVGNGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 221
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
GFFVQAIVTGKGPLEN DHL +PV NNAW YAT FVPG
Sbjct: 222 GFFVQAIVTGKGPLENWLDHLDNPVANNAWVYATKFVPG 260
>gi|15239602|ref|NP_200238.1| light-harvesting chlorophyll B-binding protein 3 [Arabidopsis
thaliana]
gi|4741952|gb|AAD28773.1|AF134126_1 Lhcb3 protein [Arabidopsis thaliana]
gi|5002210|gb|AAD37362.1|AF143691_1 type III chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|13605754|gb|AAK32870.1|AF361858_1 AT5g54270/MDK4_9 [Arabidopsis thaliana]
gi|13926339|gb|AAK49633.1|AF372917_1 AT5g54270/MDK4_9 [Arabidopsis thaliana]
gi|9759500|dbj|BAB10750.1| Lhcb3 chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|16323262|gb|AAL15365.1| AT5g54270/MDK4_9 [Arabidopsis thaliana]
gi|332009094|gb|AED96477.1| light-harvesting chlorophyll B-binding protein 3 [Arabidopsis
thaliana]
Length = 265
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/233 (75%), Positives = 190/233 (81%), Gaps = 12/233 (5%)
Query: 42 VSSGSP--------WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 93
VS GSP WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FAKN
Sbjct: 33 VSLGSPKYTMGNDLWYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKN 92
Query: 94 RELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIH 152
R LEVIH RWAMLGA GC+ PE+L + V F E VWFKAG+QIFSEGGLDYLGNP+L+H
Sbjct: 93 RALEVIHGRWAMLGAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVH 152
Query: 153 AQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKV 210
AQSILA+ QV+LMG VEG+RI G +GE D LYPGG FDPLGLADDP FAELKV
Sbjct: 153 AQSILAVLGFQVILMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKV 211
Query: 211 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
KEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAWA+AT F PG
Sbjct: 212 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWAFATKFAPG 264
>gi|302854015|ref|XP_002958519.1| hypothetical protein VOLCADRAFT_110088 [Volvox carteri f.
nagariensis]
gi|300256166|gb|EFJ40439.1| hypothetical protein VOLCADRAFT_110088 [Volvox carteri f.
nagariensis]
Length = 270
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 164/218 (75%), Positives = 185/218 (84%), Gaps = 1/218 (0%)
Query: 46 SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 105
S +YGP+R +LGP SG PSYLTGEFPGDYGWD+AGLS+DPETF + RELE+IH RWAM
Sbjct: 51 SQFYGPERALWLGPLSGSAPSYLTGEFPGDYGWDSAGLSSDPETFKRYRELELIHARWAM 110
Query: 106 LGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 165
LGALGCV PELLA+NG E VWFKAGAQIF EGGLDYLGNP L+HAQSILA ACQV+
Sbjct: 111 LGALGCVTPELLAKNGTPIAEPVWFKAGAQIFQEGGLDYLGNPGLVHAQSILATLACQVI 170
Query: 166 LMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
LMGA+EG+R+ GGP GE D L+PGG FDPL LA+DP+AFAELKVKEIKNGRLAMFSMF
Sbjct: 171 LMGAIEGFRVNGGPAGEGLDKLHPGGPWFDPLALAEDPDAFAELKVKEIKNGRLAMFSMF 230
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
GFFVQAIVTG+GP+ENL HLA+P NNA+A+AT F P
Sbjct: 231 GFFVQAIVTGQGPIENLESHLANPGVNNAFAFATKFTP 268
>gi|159478875|ref|XP_001697526.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|19749357|gb|AAD03732.2| light harvesting complex II protein precursor [Chlamydomonas
reinhardtii]
gi|158274405|gb|EDP00188.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 268
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 164/218 (75%), Positives = 183/218 (83%), Gaps = 1/218 (0%)
Query: 46 SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 105
S +YGPDR +LGP SG P+YLTGEFPGDYGWD+AGLSADPETF + RELE+IH RWAM
Sbjct: 50 SAFYGPDRGLWLGPLSGTTPAYLTGEFPGDYGWDSAGLSADPETFKRYRELELIHARWAM 109
Query: 106 LGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 165
LGALGC+ PELLA+NG E VWFKAGAQIF+EGGLDYLGNP L+HAQSILA A QV+
Sbjct: 110 LGALGCITPELLAKNGTPIVEPVWFKAGAQIFAEGGLDYLGNPGLVHAQSILATLAVQVI 169
Query: 166 LMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
LMGA+EGYR+ GGP GE D L+PGG FDPLGLA+DP+AFAELKVKEIKNGRLAMFSMF
Sbjct: 170 LMGAIEGYRVNGGPAGEGLDKLHPGGQFFDPLGLAEDPDAFAELKVKEIKNGRLAMFSMF 229
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
GFFVQAIVTGKGPL NL +HLA P +NA+ YA F P
Sbjct: 230 GFFVQAIVTGKGPLANLDEHLASPFTSNAFTYAQKFTP 267
>gi|19423289|gb|AAL88458.1|AF479779_1 major light-harvesting complex II protein m7 [Chlamydomonas
reinhardtii]
Length = 258
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/265 (64%), Positives = 203/265 (76%), Gaps = 17/265 (6%)
Query: 6 MALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSP------WYGPDRVKYLGP 59
MA + SF KA+ ++ R R+ K+ +S P +YGP+R K+LGP
Sbjct: 1 MAFALSFSRKALQVS---------ARPPARRGTGKTAASRPPPAPGIEFYGPNRAKWLGP 51
Query: 60 FS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
+S P+Y +FPGDYGWDTAGLSADPETF + RELE+IH RWAMLGALGC+ PELLA
Sbjct: 52 YSENATPAYRLAKFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCITPELLA 111
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI-WACQVVLMGAVEGYRIAG 177
++G +FGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQ+I +V+LMG VEGYR+ G
Sbjct: 112 KSGTQFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIRRHPGRFKVILMGLVEGYRVNG 171
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 172 GPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 231
Query: 238 LENLADHLADPVNNNAWAYATNFVP 262
++NL DHL++P NNA+A+AT F P
Sbjct: 232 IQNLDDHLSNPTVNNAFAFATKFTP 256
>gi|145079271|tpg|DAA05907.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm4 [Acetabularia acetabulum]
Length = 219
Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 164/212 (77%), Positives = 181/212 (85%), Gaps = 2/212 (0%)
Query: 48 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
WYGPDR +LGP+S G PSYL GEFPGDYGWDTAGLSADPETF RE E+IH RWAML
Sbjct: 8 WYGPDRALWLGPYSDGAVPSYLKGEFPGDYGWDTAGLSADPETFKAYREQELIHARWAML 67
Query: 107 GALGCVFPELLARN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 165
GALGCV PE+L++ GV FGE+VWFKAG+QIF EGGLDYLGNPSL+HAQSILAI CQVV
Sbjct: 68 GALGCVTPEILSKYAGVSFGESVWFKAGSQIFQEGGLDYLGNPSLVHAQSILAILGCQVV 127
Query: 166 LMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
LMG +E YR+ GGPLGE D L+PG SFDPLGLADDP+ FAELK+KEIKNGRLAMFSMFG
Sbjct: 128 LMGLIEAYRVNGGPLGEGLDTLHPGESFDPLGLADDPDTFAELKIKEIKNGRLAMFSMFG 187
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNNAWAYA 257
F+VQAIVTGKGP+EN ADH+ADP N AW YA
Sbjct: 188 FYVQAIVTGKGPIENWADHVADPFNVTAWNYA 219
>gi|384246503|gb|EIE19993.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
Length = 254
Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/248 (68%), Positives = 193/248 (77%), Gaps = 10/248 (4%)
Query: 26 LSNGGRISMRKTGSKSVSSGSP-------WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYG 77
LSN +S R+T S S G WYGPDR K+LGP+S G PSYL GE+PGDYG
Sbjct: 6 LSNSFVVSARRTVSSPKSKGKQVTRASIEWYGPDRPKFLGPYSDGATPSYLKGEYPGDYG 65
Query: 78 WDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQI 136
WDTAGLSADPETF++ RE+EVIH RWA+LG LG V PELL + GVKF EAVWFKAGAQI
Sbjct: 66 WDTAGLSADPETFSRYREIEVIHSRWALLGTLGIVTPELLEKYGGVKFQEAVWFKAGAQI 125
Query: 137 FSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPL 196
FS GL+YLGNPSL+HAQSI+A A QV+L+G EGYR+ GGP GE+TDPLYPGG+FDPL
Sbjct: 126 FSADGLNYLGNPSLVHAQSIIATVATQVILLGLAEGYRVNGGPAGEITDPLYPGGAFDPL 185
Query: 197 GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAY 256
GLADDP+ FAELKVKEIKNGRLA F+ GFFVQAIVTGKGP++NL DHLADP N +
Sbjct: 186 GLADDPDTFAELKVKEIKNGRLAQFAALGFFVQAIVTGKGPIQNLEDHLADPFAVNGFTI 245
Query: 257 -ATNFVPG 263
A FVPG
Sbjct: 246 GAQKFVPG 253
>gi|307106008|gb|EFN54255.1| hypothetical protein CHLNCDRAFT_56227 [Chlorella variabilis]
Length = 248
Score = 335 bits (860), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 163/219 (74%), Positives = 181/219 (82%), Gaps = 2/219 (0%)
Query: 39 SKSVSSGS-PWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 97
++ V+ S WYGP+R ++LGPFSG PSYL GE+PGDYGWDTAGLSADPETFA+ RELE
Sbjct: 19 TRQVTRASVEWYGPNRPQFLGPFSGSTPSYLKGEYPGDYGWDTAGLSADPETFARYRELE 78
Query: 98 VIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 156
VIH RWAMLGALGCV PELL NGV FGEAVWFKAGAQIF EGGLDYLGNPSLIHAQSI
Sbjct: 79 VIHARWAMLGALGCVTPELLQNNGVASFGEAVWFKAGAQIFQEGGLDYLGNPSLIHAQSI 138
Query: 157 LAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNG 216
+A+ Q+ LMG +EGYR+ GGP GE D LYPG +FDPLGLADDP+ F+ELKVKE+KNG
Sbjct: 139 VAVLLTQLTLMGLIEGYRVNGGPAGEGLDALYPGEAFDPLGLADDPDTFSELKVKELKNG 198
Query: 217 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA 255
RLAM SMFGFFVQ IVT KGP+ENL DHLA P N WA
Sbjct: 199 RLAMVSMFGFFVQGIVTKKGPIENLNDHLASPDATNFWA 237
>gi|405617|emb|CAA43804.1| LHCII Type III chlorophyll a/b binding protein [Brassica napus]
Length = 221
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/219 (78%), Positives = 185/219 (84%), Gaps = 4/219 (1%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
WYGPDRVKYLGPFS + PSYLTGEFPG+YGWDTAGLSADPE FAKNR LEVIH RWAMLG
Sbjct: 3 WYGPDRVKYLGPFSVQTPSYLTGEFPGEYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 62
Query: 108 ALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
A GC+ PE+L + V F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QV+L
Sbjct: 63 AFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVIL 122
Query: 167 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
MG VEG RI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 123 MGLVEGLRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 181
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
GFFVQAIVTGKGPLENL DHL +PV NNAWA+AT FVPG
Sbjct: 182 GFFVQAIVTGKGPLENLLDHLDNPVANNAWAFATKFVPG 220
>gi|32307464|gb|AAP79137.1| chlorophyll a/b-binding protein II 1 [Bigelowiella natans]
Length = 346
Score = 333 bits (854), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 165/236 (69%), Positives = 185/236 (78%), Gaps = 7/236 (2%)
Query: 31 RISMRKTGSKSVSSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPET 89
+++ +K G + WYGPDR +LGPFS G PSYLTGEFPGDYGWDT GLSADP T
Sbjct: 114 QVTCQKIGGAACQE---WYGPDRALWLGPFSEGAVPSYLTGEFPGDYGWDTQGLSADPTT 170
Query: 90 FAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNP 148
FA RE EVIH RWAMLG LGCV PELLA+ +GV E VWFKAG+QIF+EGGLDYLGNP
Sbjct: 171 FAAYRETEVIHARWAMLGTLGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNP 230
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAI ACQV+LMG E YR+ GGP GE D + PGG+FDPLGLADDP+ FAEL
Sbjct: 231 SLVHAQSILAILACQVILMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFAEL 290
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP--VNNNAWAYATNFVP 262
KVKEIKNGRLAMFSM GF+VQAI TGKGP+EN A+H+ADP VN A AT F P
Sbjct: 291 KVKEIKNGRLAMFSMLGFYVQAISTGKGPVENWAEHIADPSGVNGLTLATATKFTP 346
>gi|8925552|gb|AAF81517.1|AF268319_1 light-harvesting complex protein LHCG4 [Bigelowiella natans]
gi|145078979|tpg|DAA05891.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm2 [Bigelowiella natans]
Length = 345
Score = 333 bits (853), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 165/236 (69%), Positives = 185/236 (78%), Gaps = 7/236 (2%)
Query: 31 RISMRKTGSKSVSSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPET 89
+++ +K G + WYGPDR +LGPFS G PSYLTGEFPGDYGWDT GLSADP T
Sbjct: 113 QVTCQKIGGAACQE---WYGPDRALWLGPFSEGAVPSYLTGEFPGDYGWDTQGLSADPTT 169
Query: 90 FAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNP 148
FA RE EVIH RWAMLG LGCV PELLA+ +GV E VWFKAG+QIF+EGGLDYLGNP
Sbjct: 170 FAAYRETEVIHARWAMLGTLGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNP 229
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAI ACQV+LMG E YR+ GGP GE D + PGG+FDPLGLADDP+ FAEL
Sbjct: 230 SLVHAQSILAILACQVILMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFAEL 289
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP--VNNNAWAYATNFVP 262
KVKEIKNGRLAMFSM GF+VQAI TGKGP+EN A+H+ADP VN A AT F P
Sbjct: 290 KVKEIKNGRLAMFSMLGFYVQAISTGKGPVENWAEHIADPSGVNGLTLATATKFTP 345
>gi|87313207|gb|ABD37900.1| light-harvesting chlorophyll-a/b binding protein LhcbM3
[Acutodesmus obliquus]
Length = 248
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 164/221 (74%), Positives = 183/221 (82%), Gaps = 5/221 (2%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
+YGPDR K+LGPF+ E YLTGEFPGDYGWDTAGLSADP+TF++ RE+EVIH RWAMLG
Sbjct: 29 FYGPDRAKFLGPFTPES-DYLTGEFPGDYGWDTAGLSADPQTFSRYREVEVIHARWAMLG 87
Query: 108 ALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLM 167
ALGC+ PELLA+NGV FGEAVWFKAGAQIF +GGL+YLGN +L+HAQSILA A QV+LM
Sbjct: 88 ALGCITPELLAKNGVPFGEAVWFKAGAQIFQDGGLNYLGNENLVHAQSILATLAVQVILM 147
Query: 168 GAVEGYRIAGGP---LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
GA E YR GG GE D LYPGG FDPLGLADDP+ AELKVKE+KNGRLAMFSM
Sbjct: 148 GAAEAYRANGGAPGGFGEDLDSLYPGGKFFDPLGLADDPDTLAELKVKELKNGRLAMFSM 207
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
FGFFVQAIVTG+GP+ NL HLADP NNAW +AT FVPG
Sbjct: 208 FGFFVQAIVTGQGPIANLDAHLADPSGNNAWNFATKFVPGN 248
>gi|8925554|gb|AAF81518.1|AF268320_1 light-harvesting complex protein LHCG11 [Bigelowiella natans]
gi|145078995|tpg|DAA05892.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm3 [Bigelowiella natans]
Length = 333
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 165/236 (69%), Positives = 185/236 (78%), Gaps = 7/236 (2%)
Query: 31 RISMRKTGSKSVSSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPET 89
+++ +K G + WYGPDR +LGPFS G PSYLTGEFPGDYGWDT GLSADP T
Sbjct: 101 QVTCQKIGGAACQE---WYGPDRALWLGPFSEGSVPSYLTGEFPGDYGWDTQGLSADPNT 157
Query: 90 FAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNP 148
FA RE EVIH RWAMLGALGCV PELLA+ +GV E VWFKAG+QIF+EGGLDYLGNP
Sbjct: 158 FAAYRETEVIHARWAMLGALGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNP 217
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAI ACQV+LMG E YR+ GGP GE D + PGG+FDPLGLADDP+ FAEL
Sbjct: 218 SLVHAQSILAILACQVILMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFAEL 277
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP--VNNNAWAYATNFVP 262
KVKEIKNGRLAMFSM GF+VQAI TGKGP+EN A+H+ADP VN AT F P
Sbjct: 278 KVKEIKNGRLAMFSMLGFYVQAIATGKGPVENWAEHIADPAGVNGLTNGIATKFTP 333
>gi|157965837|gb|ABW06955.1| chloroplast light-harvesting complex II protein precursor [Euglena
gracilis]
Length = 613
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/238 (70%), Positives = 188/238 (78%), Gaps = 7/238 (2%)
Query: 32 ISMRKTGSKSVSSGS----PWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSAD 86
++M T + + S WYGP+R K+LGPFS G PSYLTGEFPGDYGWDTAGL+AD
Sbjct: 119 VAMFATAGRKSTPASDKLAAWYGPNRNKWLGPFSEGSTPSYLTGEFPGDYGWDTAGLAAD 178
Query: 87 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG 146
P TFAK RE E+IH RWAMLGALG VFPE LA+ GV E VWFKAGAQIFSEGGLDYLG
Sbjct: 179 PITFAKYREAELIHARWAMLGALGVVFPEALAKAGVPLAEPVWFKAGAQIFSEGGLDYLG 238
Query: 147 NPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFA 206
N +L+HAQSILAI A QVVLMG E YR+ GGPLGE +D LYPGG+FDPLGLADDPE FA
Sbjct: 239 NSNLVHAQSILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFA 298
Query: 207 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA--YATNFVP 262
ELKVKE+KNGRLAMF+MFGF+VQA+VTG+GP+EN A H+ADP N N Y T F P
Sbjct: 299 ELKVKELKNGRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 356
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/238 (70%), Positives = 188/238 (78%), Gaps = 7/238 (2%)
Query: 32 ISMRKTGSKSVSSGS----PWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSAD 86
++M T + + S WYGP+R K+LGPFS G PSYLTGEFPGDYGWDTAGL+AD
Sbjct: 359 VAMFATAGRKSTPASDKLAAWYGPNRNKWLGPFSEGSTPSYLTGEFPGDYGWDTAGLAAD 418
Query: 87 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG 146
P TFAK RE E+IH RWAMLGALG VFPE LA+ GV E VWFKAGAQIFSEGGLDYLG
Sbjct: 419 PITFAKYREAELIHARWAMLGALGVVFPEALAKAGVPLAEPVWFKAGAQIFSEGGLDYLG 478
Query: 147 NPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFA 206
N +L+HAQSILAI A QVVLMG E YR+ GGPLGE +D LYPGG+FDPLGLADDPE FA
Sbjct: 479 NSNLVHAQSILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFA 538
Query: 207 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA--YATNFVP 262
ELKVKE+KNGRLAMF+MFGF+VQA+VTG+GP+EN A H+ADP N N Y T F P
Sbjct: 539 ELKVKELKNGRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 596
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/116 (71%), Positives = 95/116 (81%), Gaps = 2/116 (1%)
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
+L+HAQSILAI A QVVLMG E YR+ GGPLGE +D LYPGG+FDPLGLADDPE FAEL
Sbjct: 1 NLVHAQSILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAEL 60
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA--YATNFVP 262
KVKE+KNGRLAMF+MFGF+VQA+VTG+GP+EN A H+ADP N N Y T F P
Sbjct: 61 KVKELKNGRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 116
>gi|8925556|gb|AAF81519.1|AF268321_1 light-harvesting complex protein LHCG12 [Bigelowiella natans]
gi|145079012|tpg|DAA05893.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm7 [Bigelowiella natans]
Length = 346
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/219 (74%), Positives = 178/219 (81%), Gaps = 4/219 (1%)
Query: 48 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
WYGPDR +LGPFS G PSYLTGEFPGDYGWDT GLSADP TFA RE EVIH RWAML
Sbjct: 128 WYGPDRALWLGPFSEGSVPSYLTGEFPGDYGWDTQGLSADPNTFAAYRETEVIHARWAML 187
Query: 107 GALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 165
GALGCV PELLA+ +GV E VWFKAG+QIF+EGGLDYLGNPSL+HAQSILAI ACQV+
Sbjct: 188 GALGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAILACQVI 247
Query: 166 LMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
LMG E YR+ GGP GE D + PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSM G
Sbjct: 248 LMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMLG 307
Query: 226 FFVQAIVTGKGPLENLADHLADP--VNNNAWAYATNFVP 262
F+VQAI TGKGP+EN A+H+ADP VN AT F P
Sbjct: 308 FYVQAIATGKGPVENWAEHIADPAGVNGLTNGIATKFTP 346
>gi|145078830|tpg|DAA05886.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm6 [Euglena gracilis]
Length = 825
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 167/238 (70%), Positives = 188/238 (78%), Gaps = 7/238 (2%)
Query: 32 ISMRKTGSKSVSSGS----PWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSAD 86
++M T + + S WYGP+R K+LGPFS G PSYLTGEFPGDYGWDTAGL+AD
Sbjct: 102 VAMFATAGRKSTPASDKLAAWYGPNRNKWLGPFSEGSTPSYLTGEFPGDYGWDTAGLAAD 161
Query: 87 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG 146
P TFAK RE E+IH RWAMLGALG VFPE LA+ GV E VWFKAGAQIFSEGGLDYLG
Sbjct: 162 PITFAKYREAELIHARWAMLGALGVVFPEALAKAGVPLAEPVWFKAGAQIFSEGGLDYLG 221
Query: 147 NPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFA 206
N +L+HAQSILAI A QVVLMG E YR+ GGPLGE +D LYPGG+FDPLGLADDPE FA
Sbjct: 222 NSNLVHAQSILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFA 281
Query: 207 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA--YATNFVP 262
ELKVKE+KNGRLAMF+MFGF+VQA+VTG+GP+EN A H+ADP N N Y T F P
Sbjct: 282 ELKVKELKNGRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 339
Score = 329 bits (843), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 166/238 (69%), Positives = 187/238 (78%), Gaps = 7/238 (2%)
Query: 32 ISMRKTGSKSVSSGS----PWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSAD 86
++M T + + S WYGP+R K+LGPFS PSYLTGEFPGDYGWDTAGL+AD
Sbjct: 342 VAMFATAGRKSTPASDKLAAWYGPNRNKWLGPFSENSTPSYLTGEFPGDYGWDTAGLAAD 401
Query: 87 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG 146
P TFAK RE E+IH RWAMLGALG VFPE LA+ GV E VWFKAGAQIFSEGGLDYLG
Sbjct: 402 PITFAKYREAELIHARWAMLGALGVVFPEALAKAGVPLAEPVWFKAGAQIFSEGGLDYLG 461
Query: 147 NPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFA 206
N +L+HAQSILAI A QVVLMG E YR+ GGPLGE +D LYPGG+FDPLGLADDPE FA
Sbjct: 462 NSNLVHAQSILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFA 521
Query: 207 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA--YATNFVP 262
ELKVKE+KNGRLAMF+MFGF+VQA+VTG+GP+EN A H+ADP N N Y T F P
Sbjct: 522 ELKVKELKNGRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 579
Score = 329 bits (843), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 166/238 (69%), Positives = 187/238 (78%), Gaps = 7/238 (2%)
Query: 32 ISMRKTGSKSVSSGS----PWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSAD 86
++M T + + S WYGP+R K+LGPFS PSYLTGEFPGDYGWDTAGL+AD
Sbjct: 582 VAMFATAGRKSTPASDKLAAWYGPNRNKWLGPFSENSTPSYLTGEFPGDYGWDTAGLAAD 641
Query: 87 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG 146
P TFAK RE E+IH RWAMLGALG VFPE LA+ GV E VWFKAGAQIFSEGGLDYLG
Sbjct: 642 PITFAKYREAELIHARWAMLGALGVVFPEALAKAGVPLAEPVWFKAGAQIFSEGGLDYLG 701
Query: 147 NPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFA 206
N +L+HAQSILAI A QVVLMG E YR+ GGPLGE +D LYPGG+FDPLGLADDPE FA
Sbjct: 702 NSNLVHAQSILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFA 761
Query: 207 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA--YATNFVP 262
ELKVKE+KNGRLAMF+MFGF+VQA+VTG+GP+EN A H+ADP N N Y T F P
Sbjct: 762 ELKVKELKNGRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 819
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 80/99 (80%), Gaps = 2/99 (2%)
Query: 166 LMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
LMG E YR+ GGPLGE +D LYPGG+FDPLGLADDPE FAELKVKE+KNGRLAMF+MFG
Sbjct: 1 LMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVKELKNGRLAMFAMFG 60
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNNAWA--YATNFVP 262
F+VQA+VTG+GP+EN A H+ADP N N Y T F P
Sbjct: 61 FYVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 99
>gi|123316054|gb|ABM74386.1| major light-harvesting chlorophyll a/b protein 3 [Dunaliella
salina]
gi|123316062|gb|ABM74387.1| major light-harvesting chlorophyll a/b protein 3 [Dunaliella
salina]
Length = 261
Score = 330 bits (846), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 166/237 (70%), Positives = 190/237 (80%), Gaps = 5/237 (2%)
Query: 31 RISMRKT--GSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 88
+++ R+T SK + S WYGPDR +LG SGEPPSYLTGEFPGDYGWDTAG SADP
Sbjct: 23 QVNARRTVKPSKGSTPDSAWYGPDRPLFLGSLSGEPPSYLTGEFPGDYGWDTAGFSADPT 82
Query: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG--EAVWFKAGAQIFSEGGLDYLG 146
TFA+ R +EVIH RWA+LGALG V PE+LA+NGV F A+WFKAG++IF EGGL+YLG
Sbjct: 83 TFARYRTIEVIHARWALLGALGIVTPEILAQNGVPFSGDAAIWFKAGSEIFKEGGLNYLG 142
Query: 147 NPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAF 205
NP+LIHAQSILA A QV++MGA EG+R G P E D LYPGG FDPLGLADDP+ F
Sbjct: 143 NPNLIHAQSILATLAVQVIVMGAAEGFRANGEAPGVEGLDTLYPGGPFDPLGLADDPDTF 202
Query: 206 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
AELKVKEIKNGRLAMF+ FGFFVQAIVTGKGP++NL DHLADP NNA+A AT FVP
Sbjct: 203 AELKVKEIKNGRLAMFACFGFFVQAIVTGKGPIQNLEDHLADPGVNNAFASATKFVP 259
>gi|18254|emb|CAA49209.1| a/b binding protein [Pyrobotrys stellata]
Length = 254
Score = 329 bits (844), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 158/230 (68%), Positives = 184/230 (80%), Gaps = 1/230 (0%)
Query: 32 ISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 91
+ R+T +K SP+YGP+R +LG SGEPP+YL GEFPGDYGWDTAGLSADPETF
Sbjct: 24 VQARRTQAKKAVPESPFYGPNRPLFLGGLSGEPPAYLNGEFPGDYGWDTAGLSADPETFK 83
Query: 92 KNRELEVIHCRWAMLGALGCVFPELLARNGVKF-GEAVWFKAGAQIFSEGGLDYLGNPSL 150
+ R+LE+IH RWA+LGALGCV PELLARNGV + VWFK GA+IF EGGL+YLGN +L
Sbjct: 84 RYRQLELIHARWALLGALGCVVPELLARNGVAMPADGVWFKVGAEIFKEGGLNYLGNENL 143
Query: 151 IHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKV 210
+HAQSI+A Q+VLMG EGYRI GGPLGE DPLYPGG+FDPLGLADDP+ AELKV
Sbjct: 144 VHAQSIVATLLVQLVLMGWAEGYRINGGPLGEGLDPLYPGGAFDPLGLADDPDTLAELKV 203
Query: 211 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
KE+KNGR+AM +MFGF VQAIVT KGPLENLADHLA P NN ++ A +
Sbjct: 204 KELKNGRMAMAAMFGFLVQAIVTQKGPLENLADHLAAPGTNNVFSNAATY 253
>gi|145079288|tpg|DAA05908.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm10 [Acetabularia acetabulum]
Length = 224
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/203 (77%), Positives = 176/203 (86%), Gaps = 1/203 (0%)
Query: 33 SMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
SMR+T KS + S WYGP+R ++LGPFSG+ PSYLTGEFPGDYGWDTAGLSADPETF +
Sbjct: 22 SMRRTQKKSSAPDSVWYGPERPQFLGPFSGDCPSYLTGEFPGDYGWDTAGLSADPETFRR 81
Query: 93 NRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLI 151
RE E+IH RWAMLGALGCV PE+LA+ GV FGE+VWFKAG+QIF EGGLDYLGN SL+
Sbjct: 82 YREQELIHARWAMLGALGCVTPEILAKYGGVSFGESVWFKAGSQIFQEGGLDYLGNSSLV 141
Query: 152 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVK 211
HAQ ILAI CQV+LMGA+E YR+ GGPLGE DPLYPGG FDPLGLADDP+ FAELKVK
Sbjct: 142 HAQYILAILGCQVLLMGAIEAYRVNGGPLGEGLDPLYPGGQFDPLGLADDPDTFAELKVK 201
Query: 212 EIKNGRLAMFSMFGFFVQAIVTG 234
EIKNGRLAMFSMFGF+VQA+VTG
Sbjct: 202 EIKNGRLAMFSMFGFYVQALVTG 224
>gi|307103588|gb|EFN51847.1| hypothetical protein CHLNCDRAFT_59790 [Chlorella variabilis]
Length = 251
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/230 (72%), Positives = 188/230 (81%), Gaps = 5/230 (2%)
Query: 38 GSKSVSSGS-PWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 95
GS+ V+ S +YGPDR K+LGPFS G PSYL GEFPGDYGWD+AGLSADPETFA+ RE
Sbjct: 20 GSRQVTRASVEFYGPDRAKWLGPFSDGAVPSYLKGEFPGDYGWDSAGLSADPETFARYRE 79
Query: 96 LEVIHCRWAMLGALGCVFPELLARNGV-KFGEA-VWFKAGAQIFSEGGLDYLGNPSLIHA 153
+EVIH RWAMLGALGC+ PELL NG FGEA VWFKAGA IFS+ GL+YLGNPSLIHA
Sbjct: 80 IEVIHARWAMLGALGCLTPELLQNNGAADFGEAAVWFKAGASIFSDDGLNYLGNPSLIHA 139
Query: 154 QSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
QSI+A+ Q+V+MGA E YR AG GP+ D LYPGG+FDPLGLADDP+ AELKVKE
Sbjct: 140 QSIVAVLLTQLVIMGAAEAYRYAGEGPVETSGDSLYPGGAFDPLGLADDPDTLAELKVKE 199
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
+KNGRLAMFSMFGFFVQA++TGK PLENLADHLADP N +A AT FVP
Sbjct: 200 LKNGRLAMFSMFGFFVQALITGKSPLENLADHLADPSTANGFAVATKFVP 249
>gi|145079190|tpg|DAA05903.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm11 [Acetabularia acetabulum]
Length = 224
Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 156/214 (72%), Positives = 183/214 (85%), Gaps = 2/214 (0%)
Query: 23 GNELSNGGRI-SMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTA 81
G++++N + SMR+T KS + + WYGPDR ++LGPFSG+ PSYLTGEFPGDYGWDTA
Sbjct: 11 GSQVANKKMVTSMRRTQKKSSAPDNVWYGPDRPQFLGPFSGDCPSYLTGEFPGDYGWDTA 70
Query: 82 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEG 140
GLSADPETF + RE E+IH RWAMLGALGCV PE+L++ GV FGE+VWFKAG+QIF EG
Sbjct: 71 GLSADPETFRRYREQELIHARWAMLGALGCVTPEILSKYGGVSFGESVWFKAGSQIFQEG 130
Query: 141 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLAD 200
GLDYLGN +L+HAQSILAI CQV+LMGA+E YR+ GGPLGE DPLYPG FDPLGLAD
Sbjct: 131 GLDYLGNSNLVHAQSILAILGCQVLLMGAIEAYRVNGGPLGEGLDPLYPGDKFDPLGLAD 190
Query: 201 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
DP+ FAELK+KEIKNGRLAMFSMFGF+VQA+VTG
Sbjct: 191 DPDTFAELKIKEIKNGRLAMFSMFGFYVQAVVTG 224
>gi|193875800|gb|ACF24536.1| light harvesting complex protein LHCII-1 [Gymnochlora stellata]
Length = 335
Score = 327 bits (837), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 165/254 (64%), Positives = 193/254 (75%), Gaps = 11/254 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
M T A+++ + +++ N+++ ++ +K G + WYGPDR +LGPF
Sbjct: 74 MLVKTGAITNKLMKSGLSM----NQIATA--VTCQKIGGAACQE---WYGPDRALWLGPF 124
Query: 61 S-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
S G PSYLTGEFPGDYGWDT GLSADP TFA RE EVIH RWAMLGALGCV PELL++
Sbjct: 125 SEGAVPSYLTGEFPGDYGWDTQGLSADPTTFAAYRETEVIHARWAMLGALGCVTPELLSK 184
Query: 120 -NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
+GV E VWFKAG+QIF+EGGLDYLGNPSLIHAQSILAI ACQVVLMG E YR+ GG
Sbjct: 185 YSGVPIAEPVWFKAGSQIFAEGGLDYLGNPSLIHAQSILAILACQVVLMGGAEAYRVNGG 244
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
P GE D + PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSM GF+VQAI TGKGP+
Sbjct: 245 PAGEGLDAINPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMLGFYVQAIATGKGPV 304
Query: 239 ENLADHLADPVNNN 252
EN A+H+ADP N
Sbjct: 305 ENWAEHIADPSGVN 318
>gi|90191869|gb|ABD91646.1| major light-harvesting chlorophyll a/b protein 2.1 [Dunaliella
salina]
gi|90191873|gb|ABD91648.1| major light-harvesting chlorophyll a/b protein 2.1 [Dunaliella
salina]
Length = 253
Score = 325 bits (834), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 163/240 (67%), Positives = 192/240 (80%), Gaps = 8/240 (3%)
Query: 32 ISMRKTGSKSVSS----GSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSAD 86
+++R+T + +++ +YGPDR K+LGPFS + P YLTGEFPGDYGWDTAGLSAD
Sbjct: 13 LNIRQTRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSAD 72
Query: 87 PETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYL 145
P+TFA+ RE+E+IH RWA+LGALG + PELL++ GV+FGE VWFKAGAQIF++GGL+YL
Sbjct: 73 PQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYL 132
Query: 146 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG--EVTDPLYPGGSFDPLGLADDPE 203
GN SLIHAQSI+A A QVVLMG E YR GG G + D LYPGG FDPLGLADDP+
Sbjct: 133 GNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPD 192
Query: 204 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
FAELKVKEIKNGRLAMFS GFFVQAIVTGKGP++NL DHLADP NNA+A AT F PG
Sbjct: 193 TFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNNAFASATKFTPG 252
>gi|90191871|gb|ABD91647.1| major light-harvesting chlorophyll a/b protein 2.2 [Dunaliella
salina]
gi|90191875|gb|ABD91649.1| major light-harvesting chlorophyll a/b protein 2.2 [Dunaliella
salina]
Length = 253
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 163/240 (67%), Positives = 191/240 (79%), Gaps = 8/240 (3%)
Query: 32 ISMRKTGSKSVSS----GSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSAD 86
+++R+T + +++ +YGPDR K+LGPFS + P YLTGEFPGDYGWDTAGLSAD
Sbjct: 13 LNIRQTRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSAD 72
Query: 87 PETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYL 145
P+TFA+ RE+E+IH RWA+LGALG + PELL++ GV+FGE VWFKAGAQIF+ GGL+YL
Sbjct: 73 PQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFAAGGLNYL 132
Query: 146 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG--EVTDPLYPGGSFDPLGLADDPE 203
GN SLIHAQSI+A A QVVLMG E YR GG G + D LYPGG FDPLGLADDP+
Sbjct: 133 GNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPD 192
Query: 204 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
FAELKVKEIKNGRLAMFS GFFVQAIVTGKGP++NL DHLADP NNA+A AT F PG
Sbjct: 193 TFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNNAFASATKFTPG 252
>gi|115829|sp|P27517.1|CB2_DUNTE RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|167985|gb|AAA62772.1| 28.5 kDa LHCII apoprotein [Dunaliella tertiolecta]
Length = 253
Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/240 (67%), Positives = 191/240 (79%), Gaps = 8/240 (3%)
Query: 32 ISMRKTGSKSVSS----GSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSAD 86
+++R+T + +++ +YGPDR K+LGPFS + P YLTGEFPGDYGWDTAGLSAD
Sbjct: 13 LNIRQTRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSAD 72
Query: 87 PETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYL 145
P+TFA+ RE+E+IH RWA+LGALG + PELL++ GV+FGE VWFKAGAQIF++GGL+YL
Sbjct: 73 PQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYL 132
Query: 146 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG--EVTDPLYPGGSFDPLGLADDPE 203
GN SLIHAQSI+A A QVVLMG E YR GG G + D LYPGG FDPLGLADDP+
Sbjct: 133 GNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPD 192
Query: 204 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
FAELKVKEIKNGRLAMFS GFFVQAIVTGKGP++NL DHLADP N A+A AT F PG
Sbjct: 193 TFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252
>gi|297744047|emb|CBI37017.3| unnamed protein product [Vitis vinifera]
Length = 183
Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/261 (67%), Positives = 179/261 (68%), Gaps = 79/261 (30%)
Query: 4 STMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGE 63
+TMALSS FVGK SGSPWYGPDRVKYLGPFSGE
Sbjct: 2 ATMALSSPFVGK---------------------------PSGSPWYGPDRVKYLGPFSGE 34
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL+RNGVK
Sbjct: 35 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSRNGVK 94
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 183
FGEAVWFKA AIWACQV+LMGAVEGYRI GGPLGE
Sbjct: 95 FGEAVWFKA-------------------------AIWACQVILMGAVEGYRIGGGPLGE- 128
Query: 184 TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 243
VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD
Sbjct: 129 --------------------------VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 162
Query: 244 HLADPVNNNAWAYATNFVPGK 264
HLADPVNNNAWAYATNFVPGK
Sbjct: 163 HLADPVNNNAWAYATNFVPGK 183
>gi|115777|sp|P12332.2|CB21_SILPR RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|169886|gb|AAB42157.1| chlorophyl-a/b-binding protein precursor, partial [Silene latifolia
subsp. alba]
Length = 205
Score = 322 bits (826), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 166/210 (79%), Positives = 180/210 (85%), Gaps = 10/210 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MATST+ S+F G+ + L P NEL NGGR+SMR+T KS S WYGPDR K
Sbjct: 1 MATSTIQ-QSAFAGQTL-LKPQ-NELVRKVGGNGGRVSMRRT-IKSAPE-SIWYGPDRPK 55
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE
Sbjct: 56 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LLA+NGVKFGEAVWFKAG+QIF EGGLDYLGNP+L+HAQSILAIWACQVVLMGAVEGYR+
Sbjct: 116 LLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRV 175
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAF 205
GGPLGE D LYPGG+FDPLGLA+DPEAF
Sbjct: 176 GGGPLGEGLDQLYPGGAFDPLGLAEDPEAF 205
>gi|145079253|tpg|DAA05906.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm8 [Acetabularia acetabulum]
Length = 220
Score = 319 bits (818), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 156/213 (73%), Positives = 175/213 (82%), Gaps = 2/213 (0%)
Query: 28 NGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSAD 86
N ++ K+ + WYGPDR K+LGPFS G+ PSYLTGEFPGDYGWDTAGLSAD
Sbjct: 8 NSAVLAQTKSIRNVSRNAVEWYGPDRAKWLGPFSEGDVPSYLTGEFPGDYGWDTAGLSAD 67
Query: 87 PETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYL 145
PETF RE E+IH RWAMLGALGCV PE+L++ GV FGE+VWFKAG+QIF EGGLDYL
Sbjct: 68 PETFKAYREQELIHARWAMLGALGCVTPEILSKYGGVSFGESVWFKAGSQIFQEGGLDYL 127
Query: 146 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAF 205
GN +LIHAQSILAI CQVVLMG +E YR+ GGPLGE DPL+PG FDPLGLADDP+ F
Sbjct: 128 GNSNLIHAQSILAILGCQVVLMGLIEAYRVNGGPLGEGLDPLHPGDKFDPLGLADDPDTF 187
Query: 206 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
AELKVKEIKNGRLAMFSMFGF+VQAIVTGKGP+
Sbjct: 188 AELKVKEIKNGRLAMFSMFGFYVQAIVTGKGPI 220
>gi|307105157|gb|EFN53408.1| hypothetical protein CHLNCDRAFT_137219 [Chlorella variabilis]
Length = 258
Score = 319 bits (817), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 164/229 (71%), Positives = 182/229 (79%), Gaps = 5/229 (2%)
Query: 40 KSVSSGS-PWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 97
K V+ S +YGPDR K+LGPFS G PSYL GEFPGDYGWDTAGLSADPETFA+ RE+E
Sbjct: 27 KQVTRASVEFYGPDRAKFLGPFSEGAVPSYLKGEFPGDYGWDTAGLSADPETFARYREIE 86
Query: 98 VIHCRWAMLGALGCVFPELLARNG-VKFGEA-VWFKAGAQIFSEGGLDYLGNPSLIHAQS 155
+IH RWA+LGALG + PE L R+G V FGEA VWFKAGA IF + GL+YLGNP LIHAQS
Sbjct: 87 LIHSRWALLGALGILTPEYLQRSGAVDFGEAAVWFKAGASIFGDDGLNYLGNPQLIHAQS 146
Query: 156 ILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 214
I+A Q+VL+G E YR AG GP+ D LYPGG FDPLGL DDPEA AELKVKEIK
Sbjct: 147 IVATLLAQIVLVGTAEAYRYAGEGPVDTSGDKLYPGGFFDPLGLGDDPEALAELKVKEIK 206
Query: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
NGRLA S+FGFFVQA+VTGKGPLENL DHLADP NNN +AYA FVPG
Sbjct: 207 NGRLAQVSVFGFFVQALVTGKGPLENLDDHLADPWNNNGFAYAAKFVPG 255
>gi|237510764|gb|ACQ99368.1| chloroplast light-harvesting chlorophyll-a/b binding protein
[Ankistrodesmus convolutus]
Length = 248
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 161/220 (73%), Positives = 179/220 (81%), Gaps = 5/220 (2%)
Query: 48 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
WYGPDR K+LGPFS G+ P YLTGEFPGDYGWDTAGLSADP TFA+ RE+E+IH RWAML
Sbjct: 28 WYGPDRPKFLGPFSEGDTPEYLTGEFPGDYGWDTAGLSADPATFARYREIELIHARWAML 87
Query: 107 GALGCVFPELLARNGVKFGEA-VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 165
GALGCV PELLA+NG + VWFKAGA IF++ GL+YLGNP+LIHAQSILA A QVV
Sbjct: 88 GALGCVVPELLAKNGTPLPDGGVWFKAGAAIFADDGLNYLGNPNLIHAQSILATLAFQVV 147
Query: 166 LMGAVEGYRIAGGPLG---EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 222
+MGA E +R GG G E D LYPG FDP+GLA+DP+ FAELKVKEIKNGRLAMFS
Sbjct: 148 VMGAAESFRFNGGAPGGFLEGNDRLYPGDQFDPMGLAEDPDTFAELKVKEIKNGRLAMFS 207
Query: 223 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
MFGFFVQAIVTG+GP+ NL HLADP NNAWA AT FVP
Sbjct: 208 MFGFFVQAIVTGQGPIANLDAHLADPSVNNAWAAATKFVP 247
>gi|15637137|gb|AAL04435.1| chlorophyll a/b binding protein [Beta vulgaris]
Length = 168
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/161 (95%), Positives = 157/161 (97%)
Query: 75 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGA 134
DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+
Sbjct: 1 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 60
Query: 135 QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFD 194
QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPLYPGGSFD
Sbjct: 61 QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFD 120
Query: 195 PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
PLGLADDPEAFAELKVKEIKNGRLAM SMFGFFVQAIV K
Sbjct: 121 PLGLADDPEAFAELKVKEIKNGRLAMSSMFGFFVQAIVLVK 161
>gi|388507164|gb|AFK41648.1| unknown [Lotus japonicus]
Length = 160
Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 153/160 (95%), Positives = 158/160 (98%)
Query: 105 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV 164
MLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSIL IWA QV
Sbjct: 1 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILVIWATQV 60
Query: 165 VLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
+LMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMF
Sbjct: 61 ILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMF 120
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
GFFVQAIVTGKGPLENLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 121 GFFVQAIVTGKGPLENLADHLSDPVNNNAWAYATNFVPGK 160
>gi|242045514|ref|XP_002460628.1| hypothetical protein SORBIDRAFT_02g032090 [Sorghum bicolor]
gi|241924005|gb|EER97149.1| hypothetical protein SORBIDRAFT_02g032090 [Sorghum bicolor]
Length = 160
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/160 (96%), Positives = 157/160 (98%)
Query: 105 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV 164
MLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QV
Sbjct: 1 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQV 60
Query: 165 VLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
VLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMF
Sbjct: 61 VLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMF 120
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG
Sbjct: 121 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGN 160
>gi|145079101|tpg|DAA05898.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm1 [Acetabularia acetabulum]
Length = 198
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/196 (77%), Positives = 169/196 (86%), Gaps = 1/196 (0%)
Query: 68 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGE 126
LTGEFPGDYGWDTAGLSADPETF K RE E+IH RWAMLGALGCV PE+LAR G FGE
Sbjct: 1 LTGEFPGDYGWDTAGLSADPETFKKYRETELIHARWAMLGALGCVTPEILARYGGTSFGE 60
Query: 127 AVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP 186
+VWF+AGAQIF +GGLDYLG+P+LIHAQSI AI QV+LMG +EGYR+ GGP GE DP
Sbjct: 61 SVWFRAGAQIFKDGGLDYLGSPALIHAQSIGAIVISQVILMGLIEGYRVNGGPAGEGLDP 120
Query: 187 LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 246
LYPG SFDPLGLADDP+ FAELK+KEIKNGRLAMFSMFGF+VQAIVTGKGP+EN A+H+A
Sbjct: 121 LYPGESFDPLGLADDPDTFAELKIKEIKNGRLAMFSMFGFYVQAIVTGKGPVENWAEHVA 180
Query: 247 DPVNNNAWAYATNFVP 262
DP NA++YAT F P
Sbjct: 181 DPFTANAFSYATKFTP 196
>gi|13676406|dbj|BAB41192.1| type I chlorophyll a/b-binding protein b [Amaranthus tricolor]
Length = 154
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/154 (97%), Positives = 153/154 (99%)
Query: 75 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGA 134
DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+
Sbjct: 1 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 60
Query: 135 QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFD 194
QIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGPLGEV DPLYPGGSFD
Sbjct: 61 QIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD 120
Query: 195 PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 228
PLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFV
Sbjct: 121 PLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV 154
>gi|224034127|gb|ACN36139.1| unknown [Zea mays]
Length = 191
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/158 (95%), Positives = 155/158 (98%)
Query: 105 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV 164
MLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQV
Sbjct: 1 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQV 60
Query: 165 VLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
VLMGA+EGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMF
Sbjct: 61 VLMGAIEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMF 120
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN P
Sbjct: 121 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNLCP 158
>gi|307103850|gb|EFN52107.1| hypothetical protein CHLNCDRAFT_32733 [Chlorella variabilis]
Length = 255
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 160/228 (70%), Positives = 184/228 (80%), Gaps = 6/228 (2%)
Query: 39 SKSVSSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 97
+K S S WYGPDR K+LGPFS G P+YLTGEFPGDYGWDT+GLSADPETF + R +E
Sbjct: 27 AKPSKSDSVWYGPDRPKFLGPFSDGLVPAYLTGEFPGDYGWDTSGLSADPETFKRFRTVE 86
Query: 98 VIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 156
VIH RWAMLGALGC+FPE+L + +GV+FGEAVWFKAGAQIF++GGL+YLGNP L+HAQSI
Sbjct: 87 VIHARWAMLGALGCIFPEVLEKYSGVEFGEAVWFKAGAQIFADGGLNYLGNPGLVHAQSI 146
Query: 157 LAIWACQVVLMGAVEGYRIAG-GP--LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEI 213
+A QV+LMGAVE YR G GP GE D LYPGG+FDPLGLADDP+ AELKVKE+
Sbjct: 147 VATLVVQVLLMGAVEIYRANGEGPSGFGEGQDNLYPGGAFDPLGLADDPDTLAELKVKEL 206
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA-YATNF 260
KNGRLAM SM GFFVQAIVTGKGPL+NL HL +P N +A YA+
Sbjct: 207 KNGRLAMMSMLGFFVQAIVTGKGPLDNLLTHLEEPGEFNFYANYASTL 254
>gi|13676402|dbj|BAB41190.1| type I chlorophyll a/b-binding protein a [Amaranthus tricolor]
Length = 154
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/154 (96%), Positives = 153/154 (99%)
Query: 75 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGA 134
DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC+FPELLARNGVKFGEAVWFKAG+
Sbjct: 1 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCIFPELLARNGVKFGEAVWFKAGS 60
Query: 135 QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFD 194
QIFSEGGLDYLGNP+LIHAQSILAIWACQV+LMGAVEGYRIAGGPLGEV DPLYPGGSFD
Sbjct: 61 QIFSEGGLDYLGNPTLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD 120
Query: 195 PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 228
PLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFV
Sbjct: 121 PLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV 154
>gi|302849997|ref|XP_002956527.1| hypothetical protein VOLCADRAFT_107271 [Volvox carteri f.
nagariensis]
gi|300258225|gb|EFJ42464.1| hypothetical protein VOLCADRAFT_107271 [Volvox carteri f.
nagariensis]
Length = 238
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/188 (78%), Positives = 165/188 (87%), Gaps = 1/188 (0%)
Query: 43 SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 101
SSG WYGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH
Sbjct: 32 SSGIEWYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHA 91
Query: 102 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 161
RWAMLGALGCV P+LL++NGV+F EA+WFKAGAQIF EGGLDYLGN SL+HAQ+I+A A
Sbjct: 92 RWAMLGALGCVTPKLLSKNGVQFSEALWFKAGAQIFQEGGLDYLGNLSLVHAQNIVATLA 151
Query: 162 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 221
CQV+LMG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMF
Sbjct: 152 CQVILMGLVEGYRVNGGPAGEGLDPLYPGKSFDPLGLADDPDTFAELKVKEIKNGRLAMF 211
Query: 222 SMFGFFVQ 229
SMFGFFVQ
Sbjct: 212 SMFGFFVQ 219
>gi|157987283|gb|ABW07803.1| chlorophyll A-B binding protein [Solenostemon scutellarioides]
Length = 170
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 147/166 (88%), Positives = 159/166 (95%)
Query: 77 GWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQI 136
GWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QI
Sbjct: 1 GWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQI 60
Query: 137 FSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPL 196
FSEGGLDYLGNP+LIHAQSILAIWA QVVLMG +EGYR+ GGPLGE D +YPGGSFDPL
Sbjct: 61 FSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDKVYPGGSFDPL 120
Query: 197 GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 242
GLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+
Sbjct: 121 GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLS 166
>gi|222618804|gb|EEE54936.1| hypothetical protein OsJ_02493 [Oryza sativa Japonica Group]
Length = 207
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/162 (93%), Positives = 153/162 (94%)
Query: 103 WAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWAC 162
WAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA
Sbjct: 46 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAV 105
Query: 163 QVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 222
QVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS
Sbjct: 106 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 165
Query: 223 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
MFGFFVQAIVTGKGP LADPVNNNAWAYATNFVPGK
Sbjct: 166 MFGFFVQAIVTGKGPPREPRRPLADPVNNNAWAYATNFVPGK 207
>gi|454250|emb|CAA82853.1| light-harvesting chlorophyll a/b binding protein [Trifolium repens]
Length = 167
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/167 (88%), Positives = 157/167 (94%)
Query: 98 VIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSIL 157
VIH RWAMLGALGC FPE+L +NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSIL
Sbjct: 1 VIHSRWAMLGALGCTFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIL 60
Query: 158 AIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGR 217
AIWA QVVLMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+AFAELKVKE+KNGR
Sbjct: 61 AIWATQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGR 120
Query: 218 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
LAMFSMFGFFVQAIVTGKGP++NL DHLADPV NNAWAYATNFVPG+
Sbjct: 121 LAMFSMFGFFVQAIVTGKGPVQNLYDHLADPVANNAWAYATNFVPGQ 167
>gi|47026929|gb|AAT08685.1| chloroplast chlorophyll a/b-binding protein [Hyacinthus orientalis]
Length = 156
Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/156 (95%), Positives = 153/156 (98%)
Query: 109 LGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG 168
LGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMG
Sbjct: 1 LGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVLLMG 60
Query: 169 AVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 228
AVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAM SMFGFFV
Sbjct: 61 AVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMLSMFGFFV 120
Query: 229 QAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
QAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 121 QAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 156
>gi|115828|sp|P20865.1|CB2_DUNSA RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|167987|gb|AAA33278.1| major chlorophyll binding protein [Dunaliella salina]
Length = 273
Score = 306 bits (783), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 154/217 (70%), Positives = 174/217 (80%), Gaps = 3/217 (1%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
+YGPD + P TGEFPGDYGWDTAGLSADPETF + RELE+IH R +LG
Sbjct: 57 FYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLG 115
Query: 108 ALGCVFPELLA-RNGVKFGEA-VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 165
ALG V PELLA +G+KFG+A +WFKAGA IF +GGL+YLGNPSLIHAQ+I+A A QVV
Sbjct: 116 ALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVV 175
Query: 166 LMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
LMG VEGYR+ GGP GE DPLYPG +FDPLGLADDP+ FAELKVKEIKNGRLAMF+ G
Sbjct: 176 LMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLG 235
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
FFVQAIVTGKGP+ENL DHLA+P NNA+AYAT F P
Sbjct: 236 FFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTP 272
>gi|302144191|emb|CBI23318.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 306 bits (783), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 156/217 (71%), Positives = 165/217 (76%), Gaps = 28/217 (12%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 51 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 110
Query: 108 ALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
A GC+ PE+L + V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QVVL
Sbjct: 111 AFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 170
Query: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
MG VEGYRI G P LKVKEIKNGRLAMFSMFGF
Sbjct: 171 MGLVEGYRINGLP---------------------------GLKVKEIKNGRLAMFSMFGF 203
Query: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
FVQAIVTGKGPLENL DHL +PV NNAWAYAT FVPG
Sbjct: 204 FVQAIVTGKGPLENLLDHLDNPVANNAWAYATKFVPG 240
>gi|48375048|gb|AAT42191.1| chloroplast chlorophyll a-b binding protein [Nicotiana tabacum]
Length = 199
Score = 305 bits (782), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 159/199 (79%), Positives = 169/199 (84%), Gaps = 4/199 (2%)
Query: 68 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGE 126
LTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L + V F E
Sbjct: 1 LTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVDFKE 60
Query: 127 AVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP-LGEVTD 185
VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QVVLMG VEG+RI G P +GE +
Sbjct: 61 PVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNN 120
Query: 186 PLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 244
LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DH
Sbjct: 121 -LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDH 179
Query: 245 LADPVNNNAWAYATNFVPG 263
L +PV NNAW YAT FVPG
Sbjct: 180 LDNPVANNAWVYATKFVPG 198
>gi|302144193|emb|CBI23320.3| unnamed protein product [Vitis vinifera]
Length = 236
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/217 (71%), Positives = 165/217 (76%), Gaps = 28/217 (12%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 46 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 105
Query: 108 ALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
A GC+ PE+L + V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QVVL
Sbjct: 106 AFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 165
Query: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
MG VEGYRI G P LKVKEIKNGRLAMFSMFGF
Sbjct: 166 MGLVEGYRINGLP---------------------------GLKVKEIKNGRLAMFSMFGF 198
Query: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
FVQAIVTGKGPLENL DHL +PV NNAWAYAT FVPG
Sbjct: 199 FVQAIVTGKGPLENLLDHLDNPVANNAWAYATKFVPG 235
>gi|384250359|gb|EIE23838.1| hypothetical protein COCSUDRAFT_28488 [Coccomyxa subellipsoidea
C-169]
Length = 275
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 171/224 (76%), Gaps = 5/224 (2%)
Query: 39 SKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 98
+KS S S WYG DR YLG F+ PSYL GEFPGDYGWDTAGLSADPETF++ RE+EV
Sbjct: 57 AKSASGASFWYGADRPGYLGAFT-RSPSYLNGEFPGDYGWDTAGLSADPETFSRYREIEV 115
Query: 99 IHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILA 158
IH RWAMLGALG V PELL + WF AGA IF G+ YLG P LI+A++I+A
Sbjct: 116 IHARWAMLGALGIVVPELLDQTN----HVAWFDAGATIFGPKGIQYLGVPGLINAKNIIA 171
Query: 159 IWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRL 218
A QV+LMGA+EGYR+ GGP GE D +YPG SFDPLGLADDP+ FAELKVKEIKNGRL
Sbjct: 172 TVAVQVILMGAIEGYRVNGGPAGEGLDKVYPGESFDPLGLADDPDTFAELKVKEIKNGRL 231
Query: 219 AMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
AMFS FGFFVQAIVTGKGP+ NL DHLA+P NN +A AT F P
Sbjct: 232 AMFSNFGFFVQAIVTGKGPIANLNDHLANPTVNNGFAAATKFTP 275
>gi|375152106|gb|AFA36511.1| light harvesting chlorophyll a/b-binding protein Lhcb1, partial
[Lolium perenne]
Length = 155
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 146/155 (94%), Positives = 152/155 (98%)
Query: 110 GCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
G FPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA
Sbjct: 1 GASFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 60
Query: 170 VEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 229
VEGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQ
Sbjct: 61 VEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQ 120
Query: 230 AIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
AIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 121 AIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 155
>gi|193875804|gb|ACF24538.1| light harvesting complex protein LHCII-3 [Gymnochlora stellata]
Length = 300
Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 148/215 (68%), Positives = 166/215 (77%), Gaps = 3/215 (1%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
WYG +R KYLGPF P+YLTGEFPGDYGWD+AGLSADP TF RE EVIH RWAMLG
Sbjct: 89 WYGENRPKYLGPFQSYTPAYLTGEFPGDYGWDSAGLSADPLTFKGYRETEVIHARWAMLG 148
Query: 108 ALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLM 167
ALGC+FPELL N F VWFKAG IF E G+DYLGNP+L+HAQS LA+ + QVVLM
Sbjct: 149 ALGCIFPELL--NSAGFNLPVWFKAGGTIF-ENGIDYLGNPNLVHAQSALAVLSVQVVLM 205
Query: 168 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 227
GA E YR GGPLGE D LYPGG+FDPLG A DP AELKVKEIKNGRLAM +M G++
Sbjct: 206 GASEAYRFNGGPLGEPADVLYPGGAFDPLGFAKDPSKAAELKVKEIKNGRLAMTAMLGYY 265
Query: 228 VQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
VQA+ TGKGP+ENL++HLADP NN +A A F P
Sbjct: 266 VQALATGKGPIENLSEHLADPSKNNGFAVAGVFTP 300
>gi|384249593|gb|EIE23074.1| putative chlorophyll a/b-binding protein, chloroplast precursor
[Coccomyxa subellipsoidea C-169]
Length = 210
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/206 (72%), Positives = 164/206 (79%), Gaps = 1/206 (0%)
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP S PSYL GEFPGDYGWDTAGLSADPETFA+ RE+EVIH RWAMLGALGC+ PELL
Sbjct: 5 GPLSSATPSYLNGEFPGDYGWDTAGLSADPETFARYREIEVIHARWAMLGALGCLTPELL 64
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
++NG F E VW+KAGAQI S GLDYLG P+L+HAQSI+A A QV+LMG+ E YR AG
Sbjct: 65 SQNGFTFQEPVWWKAGAQILSSEGLDYLGKPNLVHAQSIVATLAVQVILMGSAEAYRAAG 124
Query: 178 GPLG-EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
G + D LYPGG FDPL A DP+ AELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 125 SAPGVDGLDKLYPGGPFDPLEFASDPDTLAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 184
Query: 237 PLENLADHLADPVNNNAWAYATNFVP 262
PLENL DHLA P NN +A AT FVP
Sbjct: 185 PLENLNDHLASPYANNGFAAATKFVP 210
>gi|157965835|gb|ABW06954.1| chloroplast light-harvesting complex II protein precursor [Euglena
gracilis]
Length = 545
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 152/231 (65%), Positives = 177/231 (76%), Gaps = 4/231 (1%)
Query: 33 SMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
S RK+ KS + S WYGPDR K+LGP +GE PSYLTGE PGDYGWDTAGL +DP T A+
Sbjct: 83 SGRKSAPKS-DNLSQWYGPDRAKWLGPLTGEVPSYLTGELPGDYGWDTAGLGSDPTTLAR 141
Query: 93 NRELEVIHCRWAMLGALGCVFPELLARNGVKFGE-AVWFKAGAQIFSEGGLDYLGNPSLI 151
RE EVIH RWAMLGALG V PELLA NGV FGE AVW+KAGAQIFS GL+YLGNPSLI
Sbjct: 142 YREAEVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLI 201
Query: 152 HAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPLYPGGSFDPLGLADDPEAFAELK 209
HAQS++ + + +MGAVE YR G G G D LYPGG FDPLGLA+DP+A AELK
Sbjct: 202 HAQSVVLTFLSTLAIMGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLANDPDALAELK 261
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
VKE+KNGRLAM +M GF+VQ +VT GP+ENL HLADP +NN +++ + F
Sbjct: 262 VKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADPSSNNIFSFTSGF 312
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 148/231 (64%), Positives = 173/231 (74%), Gaps = 9/231 (3%)
Query: 33 SMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
S RK+ KS + S WYGPDR K+LGP +GE PSYLTGE PGDYGWDTAGL +DP T A+
Sbjct: 318 SGRKSAPKS-DNLSQWYGPDRAKWLGPLTGEVPSYLTGELPGDYGWDTAGLGSDPTTLAR 376
Query: 93 NRELEVIHCRWAMLGALGCVFPELLARNGVKFGE-AVWFKAGAQIFSEGGLDYLGNPSLI 151
RE EVIH RWAML V PELLA NGV FGE AVW+KAGAQIFS GL+YLGNPSLI
Sbjct: 377 YREAEVIHARWAML-----VTPELLAGNGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLI 431
Query: 152 HAQSILAIWACQVVLMGAVEGYRIAGG--PLGEVTDPLYPGGSFDPLGLADDPEAFAELK 209
HAQS++ + + +MGAVE YR GG G D LYPGG FDPLGLA+DP+A AELK
Sbjct: 432 HAQSVVLTFLSTLAIMGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLANDPDALAELK 491
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
VKE+KNGRLAM +M GF+VQ +VT GP+ENL HLADP +NN +++ + F
Sbjct: 492 VKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADPSSNNIFSFTSGF 542
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 62/76 (81%)
Query: 185 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 244
D LYPGG FDPLGLA+DP+A AELKVKE+KNGRLAM +M GF+VQ +VT GP+ENL H
Sbjct: 2 DTLYPGGPFDPLGLANDPDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFH 61
Query: 245 LADPVNNNAWAYATNF 260
LADP +NN +++ + F
Sbjct: 62 LADPSSNNIFSFTSGF 77
>gi|87313233|gb|ABD37912.1| light-harvesting chlorophyll-a/b binding protein LhcbM5
[Chlamydomonas incerta]
Length = 232
Score = 300 bits (767), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 147/187 (78%), Positives = 160/187 (85%), Gaps = 1/187 (0%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
+YGPDR +LGP SG P+YLTGEFPGDYGWD+AGLSADPETF + RELE+IH RWAMLG
Sbjct: 46 FYGPDRGLWLGPLSGTTPAYLTGEFPGDYGWDSAGLSADPETFKRYRELELIHARWAMLG 105
Query: 108 ALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLM 167
ALGCV PELLA+NG E VWFKAGAQIF EGGLDYLGN LIHAQSILA A QV+LM
Sbjct: 106 ALGCVTPELLAKNGTPIAEPVWFKAGAQIFQEGGLDYLGNAGLIHAQSILATLAVQVILM 165
Query: 168 GAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
GA+EGYR+ GGP GE D L+PGG FDPLGLA+DP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 166 GAIEGYRVNGGPAGEGLDKLHPGGQFFDPLGLAEDPDAFAELKVKEIKNGRLAMFSMFGF 225
Query: 227 FVQAIVT 233
FVQAIVT
Sbjct: 226 FVQAIVT 232
>gi|145078761|tpg|DAA05883.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm4 [Euglena gracilis]
Length = 367
Score = 299 bits (766), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 152/231 (65%), Positives = 177/231 (76%), Gaps = 4/231 (1%)
Query: 33 SMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
S RK+ KS + S WYGPDR K+LGP +GE PSYLTGE PGDYGWDTAGL +DP T A+
Sbjct: 31 SGRKSAPKS-DNLSQWYGPDRAKWLGPLTGEVPSYLTGELPGDYGWDTAGLGSDPTTLAR 89
Query: 93 NRELEVIHCRWAMLGALGCVFPELLARNGVKFGE-AVWFKAGAQIFSEGGLDYLGNPSLI 151
RE EVIH RWAMLGALG V PELLA NGV FGE AVW+KAGAQIFS GL+YLGNPSLI
Sbjct: 90 YREAEVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLI 149
Query: 152 HAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPLYPGGSFDPLGLADDPEAFAELK 209
HAQS++ + + +MGAVE YR G G G D LYPGG FDPLGLA+DP+A AELK
Sbjct: 150 HAQSVVLTFLSTLAIMGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLANDPDALAELK 209
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
VKE+KNGRLAM +M GF+VQ +VT GP+ENL HLADP +NN +++ + F
Sbjct: 210 VKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADPSSNNIFSFTSGF 260
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/103 (71%), Positives = 81/103 (78%), Gaps = 2/103 (1%)
Query: 33 SMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
S RK+ KS + S WYGPDR K+LGP +GE PSYLTGE PGDYGWDTAGL +DP T A+
Sbjct: 266 SGRKSAPKS-DNLSQWYGPDRAKWLGPLTGEVPSYLTGELPGDYGWDTAGLGSDPTTLAR 324
Query: 93 NRELEVIHCRWAMLGALGCVFPELLARNGVKFGE-AVWFKAGA 134
RE EVIH RWAMLGALG V PELLA NGV FGE AVW+KAGA
Sbjct: 325 YREAEVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGA 367
>gi|145078711|tpg|DAA05881.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm1 [Euglena gracilis]
Length = 642
Score = 299 bits (765), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 150/231 (64%), Positives = 175/231 (75%), Gaps = 3/231 (1%)
Query: 33 SMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
S RK+ + + S WYGPDR K+LGP +GE PSYLTGE PGDYGWDTAGL +DP T A+
Sbjct: 376 SGRKSAAPKSDNLSQWYGPDRAKWLGPLTGEVPSYLTGELPGDYGWDTAGLGSDPTTLAR 435
Query: 93 NRELEVIHCRWAMLGALGCVFPELLARNGVKFGE-AVWFKAGAQIFSEGGLDYLGNPSLI 151
RE EVIH RWAMLGALG V PELLA NGV FGE AVW+KAGAQIFS GL+YLGNPSLI
Sbjct: 436 YREAEVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLI 495
Query: 152 HAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPLYPGGSFDPLGLADDPEAFAELK 209
HAQS++ + + +MGAVE YR G G G D LYPGG FDPLGLA+DP+A AELK
Sbjct: 496 HAQSVVLTFLSTLAIMGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLANDPDALAELK 555
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
VKE+KNGRLAM +M GF+VQ +VT GP+ENL HLADP NN +++ + F
Sbjct: 556 VKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADPSANNIFSFTSGF 606
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 156/218 (71%), Gaps = 3/218 (1%)
Query: 43 SSGSPWYGPDRVKYLGPFSG-EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 101
++GS WYGP+R K+LGP SG P YL GE+ GDYG+DTAGL+ADP+ F + R+ E+ +
Sbjct: 150 ATGSKWYGPNRPKWLGPLSGGAVPEYLKGEYAGDYGFDTAGLAADPKLFQRYRDAELQNG 209
Query: 102 RWAMLGALGCVFPELLARN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIW 160
RWAMLG LGC+ PE+L+ GV + E VWFK GA I + G +DYL NP LIHA ++L
Sbjct: 210 RWAMLGVLGCLAPEVLSNVFGVPYPEPVWFKTGATILNGGSIDYLANPKLIHASNLLLTL 269
Query: 161 ACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLA 219
++V A E +R AG GPLG+ D YPGG FDPLGL+ DP AFAE KVKE+KNGRLA
Sbjct: 270 VLELVFFFAAETWREAGEGPLGKAQDKSYPGGVFDPLGLSKDPAAFAEAKVKEVKNGRLA 329
Query: 220 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYA 257
M +M G FVQA VTG+ PLENL+ HLA+P N +YA
Sbjct: 330 MLAMLGLFVQAGVTGQSPLENLSAHLANPGVNFWTSYA 367
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 109/144 (75%), Gaps = 3/144 (2%)
Query: 120 NGVKFGE-AVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
NGV FGE AVW+KAGAQIFS GL+YLGNPSLIHAQS++ + + +MGAVE YR GG
Sbjct: 2 NGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLIHAQSVVLTFLSTLAIMGAVEAYRYGGG 61
Query: 179 --PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
G D LYPGG FDPLGLA+DP+A AELKVKE+KNGRLAM +M GF+VQ +VT G
Sbjct: 62 VGDFGRELDTLYPGGPFDPLGLANDPDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAG 121
Query: 237 PLENLADHLADPVNNNAWAYATNF 260
P+ENL HLADP NN +++ + F
Sbjct: 122 PVENLTFHLADPSANNIFSFTSGF 145
>gi|449479523|ref|XP_004155624.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 153
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/149 (96%), Positives = 149/149 (100%)
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
LL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRI
Sbjct: 5 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 64
Query: 176 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
AGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 65 AGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 124
Query: 236 GPLENLADHLADPVNNNAWAYATNFVPGK 264
GPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 125 GPLENLADHLADPVNNNAWAYATNFVPGK 153
>gi|148908677|gb|ABR17446.1| unknown [Picea sitchensis]
Length = 160
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/160 (90%), Positives = 151/160 (94%)
Query: 105 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV 164
MLGALGCVFPELLA+ GVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QV
Sbjct: 1 MLGALGCVFPELLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQV 60
Query: 165 VLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
VLMG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF
Sbjct: 61 VLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 120
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
GFFVQAIVTGKGP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 121 GFFVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 160
>gi|169743370|gb|ACA66263.1| chloroplast chlorophyll a/b binding protein precursor
[Phyllostachys edulis]
Length = 261
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/256 (62%), Positives = 185/256 (72%), Gaps = 14/256 (5%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSK---SVSSGSPWYGPDRVKYL 57
MA +TMALSS + + G ++ GRI+MRKTG + + +SGSPWYGPDRV YL
Sbjct: 1 MAAATMALSSPALAGKI-----GRDVFGEGRITMRKTGGRARPTAASGSPWYGPDRVLYL 55
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG G + PE
Sbjct: 56 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGVAGFIIPEAC 115
Query: 118 ARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
+ G G EAVWFK GA + L+Y GN I ILA+ A +VVL+G E YRI
Sbjct: 116 NKFGANCGPEAVWFKTGALLLDGNTLNYFGNS--IPINLILAVIA-EVVLVGGAEYYRII 172
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+G
Sbjct: 173 NGL--DLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEG 230
Query: 237 PLENLADHLADPVNNN 252
P+ENLA HL+DP NN
Sbjct: 231 PVENLAKHLSDPFGNN 246
>gi|510388|emb|CAA43633.1| light harvesting chlorophyll a /b binding protein of PSII [Euglena
gracilis]
Length = 1055
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 150/231 (64%), Positives = 175/231 (75%), Gaps = 3/231 (1%)
Query: 33 SMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
S RK+ + + S WYGPDR K+LGP +GE PSYLTGE PGDYGWDTAGL +DP T A+
Sbjct: 580 SGRKSAAPKSDNLSQWYGPDRAKWLGPLTGEVPSYLTGELPGDYGWDTAGLGSDPTTLAR 639
Query: 93 NRELEVIHCRWAMLGALGCVFPELLARNGVKFGE-AVWFKAGAQIFSEGGLDYLGNPSLI 151
RE EVIH RWAMLGALG V PELLA NGV FGE AVW+KAGAQIFS GL+YLGNPSLI
Sbjct: 640 YREAEVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLI 699
Query: 152 HAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPLYPGGSFDPLGLADDPEAFAELK 209
HAQS++ + + +MGAVE YR G G G D LYPGG FDPLGLA+DP+A AELK
Sbjct: 700 HAQSVVLTFLSTLAIMGAVEAYRYGGGVGDSGRELDTLYPGGPFDPLGLANDPDALAELK 759
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
VKE+KNGRLAM +M GF+VQ +VT GP+ENL HLADP NN +++ + F
Sbjct: 760 VKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADPSANNIFSFTSGF 810
Score = 296 bits (758), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 154/256 (60%), Positives = 181/256 (70%), Gaps = 6/256 (2%)
Query: 8 LSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSY 67
L+ F L L+ GR + S ++S WYGPDR K+LGP +GE PSY
Sbjct: 97 LTDPFENNLFQLTSGFAMLATSGRKAKAAPKSDNLSQ---WYGPDRAKWLGPLTGEVPSY 153
Query: 68 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE- 126
LTGE PGDYGWDTAGL +DP T A+ RE EVIH RWAMLGALG V PELLA NGV FGE
Sbjct: 154 LTGELPGDYGWDTAGLGSDPTTLARYREAEVIHARWAMLGALGVVTPELLAGNGVPFGEG 213
Query: 127 AVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVT 184
AVW+KAGAQIFS GL+YLGNPSLIHAQS++ + + +MGAVE YR G G G
Sbjct: 214 AVWYKAGAQIFSADGLNYLGNPSLIHAQSVVLTFLSTLAIMGAVEAYRYGGGVGDFGREL 273
Query: 185 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 244
D LYPGG FDPLGLA+DP+A AELKVKE+KNGRLAM +M GF+VQ +VT GP+ENL H
Sbjct: 274 DTLYPGGPFDPLGLANDPDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFH 333
Query: 245 LADPVNNNAWAYATNF 260
LADP NN +++ + F
Sbjct: 334 LADPSANNIFSFTSGF 349
Score = 289 bits (740), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 146/215 (67%), Positives = 162/215 (75%), Gaps = 3/215 (1%)
Query: 49 YGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 108
YGPDRVK+LG F+G P YLTGE PGDYGWDTAGL ADP A+ R +VIH RWAMLG
Sbjct: 838 YGPDRVKWLGGFTGFVPEYLTGELPGDYGWDTAGLGADPAKLARYRVAQVIHGRWAMLGV 897
Query: 109 LGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLM 167
LGC FPE + R GV FGE VWFKAGAQIFSE GL+YLG P LIHAQS++ + +VLM
Sbjct: 898 LGCWFPECINRWGGVPFGEPVWFKAGAQIFSEDGLNYLGQPGLIHAQSVVLTFLSTLVLM 957
Query: 168 GAVEGYRIAG--GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
GAVE YR AG G G DPLYPGG FDPLGLADDPEAF ELKVKE+KNGRLAM ++FG
Sbjct: 958 GAVEAYRSAGSVGDFGADLDPLYPGGPFDPLGLADDPEAFLELKVKEVKNGRLAMVAIFG 1017
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
FFVQ I+TGKGP+EN DHL DP NN + F
Sbjct: 1018 FFVQGILTGKGPVENWVDHLTDPFVNNIFQLTPGF 1052
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 156/218 (71%), Gaps = 3/218 (1%)
Query: 43 SSGSPWYGPDRVKYLGPFSG-EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 101
++GS WYGP+R K+LGP SG P YL GE+ GDYG+DTAGL+ADP+ F + R+ E+ +
Sbjct: 354 ATGSKWYGPNRPKWLGPLSGGAVPEYLKGEYAGDYGFDTAGLAADPKLFQRYRDAELQNG 413
Query: 102 RWAMLGALGCVFPELLARN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIW 160
RWAMLG LGC+ PE+L+ GV + E VWFK GA I + G +DYL NP LIHA ++L
Sbjct: 414 RWAMLGVLGCLAPEVLSNVFGVPYPEPVWFKTGATILNGGSIDYLANPKLIHASNLLLTL 473
Query: 161 ACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLA 219
++V A E +R AG GPLG+ D YPGG FDPLGL+ DP AFAE KVKE+KNGRLA
Sbjct: 474 VLELVFFFAAETWREAGEGPLGKAQDKSYPGGVFDPLGLSKDPAAFAEAKVKEVKNGRLA 533
Query: 220 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYA 257
M +M G FVQA VTG+ PLENL+ HLA+P N +YA
Sbjct: 534 MLAMLGLFVQAGVTGQSPLENLSAHLANPGVNFWTSYA 571
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 83/112 (74%), Gaps = 2/112 (1%)
Query: 151 IHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
IHAQS++ + +VLMGAVE YR AG G G DPLYPGG FDPLGLADDPEAF EL
Sbjct: 1 IHAQSVVLTFLSTLVLMGAVEAYRSAGSVGDFGADLDPLYPGGPFDPLGLADDPEAFLEL 60
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
KVKE+KNGRLAM ++FGF VQ I+TGKGP+EN DHL DP NN + + F
Sbjct: 61 KVKEVKNGRLAMVAIFGFSVQGILTGKGPVENWVDHLTDPFENNLFQLTSGF 112
>gi|307110329|gb|EFN58565.1| hypothetical protein CHLNCDRAFT_59584 [Chlorella variabilis]
Length = 249
Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 148/215 (68%), Positives = 169/215 (78%), Gaps = 6/215 (2%)
Query: 48 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
WYGP R K+LGP+S G PSYLTGEFPGDYGWDTAGLSADP+TFA+ RE+EVIH RWAML
Sbjct: 38 WYGPSRPKFLGPYSDGATPSYLTGEFPGDYGWDTAGLSADPQTFARYREIEVIHARWAML 97
Query: 107 GALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
GALGCV PELL +G WF AGA IFS+ GL YLG P LI+A+SI+A QV+L
Sbjct: 98 GALGCVVPELL--DGTN--HIAWFNAGATIFSDDGLQYLGIPGLINAKSIVATLIVQVIL 153
Query: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
M VEGYR+ GGP G D +YPGGSFDPLGLADDP+ F+ELKVKEIKNGRLAM SMFGF
Sbjct: 154 MSYVEGYRVNGGPAGTGLDAVYPGGSFDPLGLADDPDTFSELKVKEIKNGRLAMLSMFGF 213
Query: 227 FVQAIVTGKGPLENLADHLADPVNNNAWA-YATNF 260
F+QAIVTG+GP+ENL HLAD NN ++ YA+
Sbjct: 214 FIQAIVTGEGPIENLNKHLADASANNFYSLYASTL 248
>gi|405615|emb|CAA43803.1| LHC II Type III chlorophyll a/b binding protein [Brassica napus]
Length = 267
Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 158/220 (71%), Positives = 173/220 (78%), Gaps = 6/220 (2%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE-TFAKNRELEVIHCRWAML 106
WYGPDRVKYLGPFS + PSY TGEFPGDYGWDTAGLSADPE FAKN LEVI+ RWAML
Sbjct: 47 WYGPDRVKYLGPFSVQTPSYPTGEFPGDYGWDTAGLSADPEKAFAKNIALEVIYGRWAML 106
Query: 107 GALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 165
GA GC+ PE+L + V F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QV+
Sbjct: 107 GAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVI 166
Query: 166 LMGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
LMG VEG+RI +GE D LYPGG FD L L DD F ELKVKEIKNG LAMFSM
Sbjct: 167 LMGLVEGFRINRFDGVGEGND-LYPGGKYFDLLSLVDDQVTFVELKVKEIKNGMLAMFSM 225
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNN-NAWAYATNFVP 262
FGFFVQAIVTGK PLE+L DHL + V N NAWA+ T FVP
Sbjct: 226 FGFFVQAIVTGKDPLESLLDHLDNFVANINAWAFTTKFVP 265
>gi|227206230|dbj|BAH57170.1| AT3G27690 [Arabidopsis thaliana]
Length = 160
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/160 (87%), Positives = 152/160 (95%)
Query: 105 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV 164
MLGALGC FPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQV
Sbjct: 1 MLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQV 60
Query: 165 VLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
VLMG +EGYRI GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMF
Sbjct: 61 VLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMF 120
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
GFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 121 GFFVQAIVTGKGPIENLFDHIADPVANNAWAYATNFVPGK 160
>gi|12240089|gb|AAG49561.1| light-harvesting chlorophyll-binding protein [Citrus reticulata]
Length = 156
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/156 (90%), Positives = 148/156 (94%)
Query: 70 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 129
GEFPGDYGWDTAGLSADPETFAKNRE EVIH RWAMLGALGCVFPE+L++NGVKFGEAVW
Sbjct: 1 GEFPGDYGWDTAGLSADPETFAKNREPEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVW 60
Query: 130 FKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYP 189
FKAGAQIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG VEGYRI GGPLGE DPLYP
Sbjct: 61 FKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYP 120
Query: 190 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
GG+FDPLGLAD P+ FAELKVKE+KNGRLAMFSMFG
Sbjct: 121 GGAFDPLGLADGPDQFAELKVKELKNGRLAMFSMFG 156
>gi|87313203|gb|ABD37898.1| light-harvesting chlorophyll-a/b binding protein LhcbM1
[Acutodesmus obliquus]
Length = 223
Score = 290 bits (741), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 143/200 (71%), Positives = 160/200 (80%), Gaps = 2/200 (1%)
Query: 31 RISMRKTGSKSVSS-GSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 89
++ R+T + S+ S WYGPDR KYLG SGE P+YLTGEF GDYGWDTAGLSADPET
Sbjct: 24 KVEARRTVKGASSAPDSVWYGPDRPKYLGWLSGETPAYLTGEFAGDYGWDTAGLSADPET 83
Query: 90 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 149
F + RELE+IH RWAMLGALGC+ PELLA NG E VWFKAGAQIF +GGL+YLGN +
Sbjct: 84 FKRYRELELIHARWAMLGALGCITPELLANNGTPIAEPVWFKAGAQIFQDGGLNYLGNEN 143
Query: 150 LIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAEL 208
L+HAQSI+ QV+LMG VEGYR+ GGP GE D LYPGG FDPLGLADDP+ FAEL
Sbjct: 144 LVHAQSIIVTLLVQVILMGTVEGYRVNGGPAGEGLDKLYPGGDFFDPLGLADDPDTFAEL 203
Query: 209 KVKEIKNGRLAMFSMFGFFV 228
KVKEIKNGRLAMFSMFGFFV
Sbjct: 204 KVKEIKNGRLAMFSMFGFFV 223
>gi|145078806|tpg|DAA05885.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm5 [Euglena gracilis]
Length = 695
Score = 289 bits (739), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 152/231 (65%), Positives = 171/231 (74%), Gaps = 6/231 (2%)
Query: 38 GSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
GSK+ + S WYGPDR K+LGP+S P YL GE PGDYGWD+AGL ADP T + RE
Sbjct: 215 GSKAPAGLSQWYGPDRSKWLGPYSDALTPPYLNGELPGDYGWDSAGLGADPITLQRYREA 274
Query: 97 EVIHCRWAMLGALGCVFPELLARN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 155
E+IH RWAMLGALG VFPE L+RN + E VWFKAGAQIFSEGGLDYLG+ L+HAQS
Sbjct: 275 ELIHGRWAMLGALGVVFPEYLSRNFDIPIAEPVWFKAGAQIFSEGGLDYLGDARLVHAQS 334
Query: 156 ILAIWACQVVLMGAVEGYRIAGG--PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEI 213
IL I QV+LMGA E YR G G+ D LYPGG FDPLGLA+DP+ AELKVKEI
Sbjct: 335 ILLILGTQVLLMGAAEAYRTGNGLGNFGKDLDSLYPGGPFDPLGLANDPDTLAELKVKEI 394
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP--VNNNAWAYATNFVP 262
KNGRLAMF+MFGF+VQAIVTG+ PLENL+ HLA P VN AY T F P
Sbjct: 395 KNGRLAMFAMFGFYVQAIVTGESPLENLSAHLASPFTVNGLNAAYMTQFTP 445
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 148/224 (66%), Positives = 167/224 (74%), Gaps = 7/224 (3%)
Query: 46 SPWYGPDRVKYLGPFSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
S WYGP+R K+LGP+S PSYLTGE PGDYGWDTAGL ADP T + RE E+IH RWA
Sbjct: 466 SAWYGPNRNKWLGPYSDRSVPSYLTGELPGDYGWDTAGLGADPFTLQRYREAELIHGRWA 525
Query: 105 MLGALGCVFPELLARN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA+GC PE L R GV+FGE +WFKAGAQIFS GL+Y G P+LIHA+S+LAI A Q
Sbjct: 526 MLGAVGCFLPEYLNRFFGVQFGEPIWFKAGAQIFSAEGLNYFGQPALIHAKSLLAILATQ 585
Query: 164 VVLMGAVEGYR---IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAM 220
V+LMGAVE YR A G GE D LYPGG FDPLGLADDP+ FAELKVKEIKNGRLAM
Sbjct: 586 VLLMGAVEAYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAM 645
Query: 221 FSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW--AYATNFVP 262
+M GF+ QAIVTG+GP+EN HL DP +N A T F P
Sbjct: 646 MAMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTAALVTQFAP 689
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/204 (67%), Positives = 153/204 (75%), Gaps = 6/204 (2%)
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN-GVK 123
PSYLTGE PGDYGWDTAGL ADP T + RE E+IH RWAMLGA+GC PE L R GV+
Sbjct: 2 PSYLTGELPGDYGWDTAGLGADPFTLQRYREAELIHGRWAMLGAVGCFLPEYLNRFFGVQ 61
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR---IAGGPL 180
FGE +WFKAGAQIFS GL+Y G P+LIHA+S+LAI A QV+LMGAVE YR A G
Sbjct: 62 FGEPIWFKAGAQIFSAEGLNYFGQPALIHAKSLLAILATQVLLMGAVEAYRAGNTAPGQF 121
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
GE D LYPGG FDPLGLADDP+ FAELKVKEIKNGRLAM +M GF+ QAIVTG+GP+EN
Sbjct: 122 GEDLDRLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMVAMLGFYAQAIVTGEGPVEN 181
Query: 241 LADHLADPVNNNAW--AYATNFVP 262
HL DP +N A T F P
Sbjct: 182 WLYHLQDPSAHNGLTAALVTQFAP 205
>gi|149392733|gb|ABR26169.1| chlorophyll a-b binding protein [Oryza sativa Indica Group]
Length = 144
Score = 286 bits (732), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 140/144 (97%), Positives = 142/144 (98%)
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL 180
GVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAGGPL
Sbjct: 1 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPL 60
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
GEV DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 61 GEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 120
Query: 241 LADHLADPVNNNAWAYATNFVPGK 264
LADHLADPVNNNAWAYATNFVPGK
Sbjct: 121 LADHLADPVNNNAWAYATNFVPGK 144
>gi|225690798|gb|ACO06085.1| chlorophyll a-b binding protein [Triticum aestivum]
Length = 196
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/201 (71%), Positives = 164/201 (81%), Gaps = 11/201 (5%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN-----GGRISMRKTGSKSVSSGSPWYGPDRVK 55
MA S + ++SF+G A P ++L GGRI+MR+T KS S WYGPDR K
Sbjct: 1 MAASALHQTTSFLGTA----PRRDDLVRSVGDFGGRITMRRT-VKSAPQ-SIWYGPDRPK 54
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 55 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 114
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+L++NG+KFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+
Sbjct: 115 ILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFIEGYRV 174
Query: 176 AGGPLGEVTDPLYPGGSFDPL 196
GGPLGE D +YPGG++ L
Sbjct: 175 GGGPLGEGLDIIYPGGAYTHL 195
>gi|47026947|gb|AAT08694.1| chloroplast chlorophyll A-B binding protein 40 [Hyacinthus
orientalis]
Length = 211
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/205 (73%), Positives = 161/205 (78%), Gaps = 5/205 (2%)
Query: 4 STMALSS-SFVGKAVNLAPSGNELSNGG-RISMRKTGSK--SVSSGSPWYGPDRVKYLGP 59
STMALSS S G AV L PS + +G R +MRKT +K +VSSGSPWYGPDRVKYLGP
Sbjct: 3 STMALSSPSLAGTAVKLTPSSSSGVSGDGRFTMRKTAAKPKTVSSGSPWYGPDRVKYLGP 62
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 63 FSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLAR 122
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR-IAGG 178
NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMG GY+
Sbjct: 123 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVLLMGGRRGYKGCRWA 182
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPE 203
P + P P + L P
Sbjct: 183 PRRRWSTPFTPAAASTRLASPTTPR 207
>gi|296085004|emb|CBI28419.3| unnamed protein product [Vitis vinifera]
Length = 172
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/231 (65%), Positives = 159/231 (68%), Gaps = 59/231 (25%)
Query: 34 MRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 93
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 1 MRRTVKST--PQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
RELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAV
Sbjct: 59 RELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAV------------------------- 93
Query: 154 QSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEI 213
ILAIWACQVVLMG VEGYR+ ELKVKEI
Sbjct: 94 -CILAIWACQVVLMGFVEGYRV-------------------------------ELKVKEI 121
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 122 KNGRLAMFSMFGFFVQAIVTGKGPIENLVDHLADPVANNAWAYATNFVPGK 172
>gi|157965839|gb|ABW06956.1| chloroplast light-harvesting complex II protein precursor [Euglena
gracilis]
Length = 468
Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 148/224 (66%), Positives = 167/224 (74%), Gaps = 7/224 (3%)
Query: 46 SPWYGPDRVKYLGPFSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
S WYGP+R K+LGP+S PSYLTGE PGDYGWDTAGL ADP T + RE E+IH RWA
Sbjct: 239 SAWYGPNRNKWLGPYSDRSVPSYLTGELPGDYGWDTAGLGADPFTLQRYREAELIHGRWA 298
Query: 105 MLGALGCVFPELLARN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA+GC PE L R GV+FGE +WFKAGAQIFS GL+Y G P+LIHA+S+LAI A Q
Sbjct: 299 MLGAVGCFLPEYLNRFFGVQFGEPIWFKAGAQIFSAEGLNYFGQPALIHAKSLLAILATQ 358
Query: 164 VVLMGAVEGYR---IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAM 220
V+LMGAVE YR A G GE D LYPGG FDPLGLADDP+ FAELKVKEIKNGRLAM
Sbjct: 359 VLLMGAVEAYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAM 418
Query: 221 FSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW--AYATNFVP 262
+M GF+ QAIVTG+GP+EN HL DP +N A T F P
Sbjct: 419 VAMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTAALVTQFAP 462
Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 145/218 (66%), Positives = 163/218 (74%), Gaps = 6/218 (2%)
Query: 51 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 109
PDR K+LGP+S P YL GE PGDYGWD+AGL ADP T + RE E+IH RWAMLGAL
Sbjct: 1 PDRSKWLGPYSDALTPPYLNGELPGDYGWDSAGLGADPITLQRYREAELIHGRWAMLGAL 60
Query: 110 GCVFPELLARN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG 168
G VFPE L+RN + E VWFKAGAQIFSEGGLDYLG+ L+HAQSIL I QV+LMG
Sbjct: 61 GVVFPEYLSRNFDIPIAEPVWFKAGAQIFSEGGLDYLGDARLVHAQSILLILGTQVLLMG 120
Query: 169 AVEGYRIAGG--PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
A E YR G G+ D LYPGG FDPLGLA+DP+ AELKVKEIKNGRLAMF+MFGF
Sbjct: 121 AAEAYRTGNGLGNFGKDLDSLYPGGPFDPLGLANDPDTLAELKVKEIKNGRLAMFAMFGF 180
Query: 227 FVQAIVTGKGPLENLADHLADP--VNNNAWAYATNFVP 262
+VQAIVTG+ PLENL+ HLA P VN AY T F+P
Sbjct: 181 YVQAIVTGESPLENLSAHLASPFTVNGLNAAYMTQFMP 218
>gi|145079310|tpg|DAA05909.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm3 [Acetabularia acetabulum]
Length = 208
Score = 283 bits (723), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 143/191 (74%), Positives = 158/191 (82%), Gaps = 5/191 (2%)
Query: 35 RKTGSKSVSSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 93
R G+K+ WYGP+R K+LGP+S G PSYLTGEFPGDYGWDTAGLSADPETF K
Sbjct: 21 RNVGAKAADE---WYGPNRAKWLGPYSDGAVPSYLTGEFPGDYGWDTAGLSADPETFKKY 77
Query: 94 RELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIH 152
RE E+IH R+AMLGALGCV PELLA+ GV FGE+VWF+AGAQIF EGGLDYLG+P+LIH
Sbjct: 78 RETELIHARFAMLGALGCVTPELLAKYGGVSFGESVWFRAGAQIFQEGGLDYLGSPALIH 137
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
AQSI AI QVVLMG VEGYR+ GGP GE D LYPG SFDPLGLADDP+ FAELK+KE
Sbjct: 138 AQSIGAIVISQVVLMGLVEGYRVNGGPAGEGLDSLYPGESFDPLGLADDPDTFAELKIKE 197
Query: 213 IKNGRLAMFSM 223
IKNGRLAMFSM
Sbjct: 198 IKNGRLAMFSM 208
>gi|147860827|emb|CAN83151.1| hypothetical protein VITISV_031291 [Vitis vinifera]
Length = 244
Score = 283 bits (723), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 149/218 (68%), Positives = 161/218 (73%), Gaps = 24/218 (11%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
WYGPDRVKYLGPFS + P FA+NR LEVIH RWAMLG
Sbjct: 48 WYGPDRVKYLGPFSAQ----------------------TPFAFARNRALEVIHGRWAMLG 85
Query: 108 ALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
ALGC+ PE+L + V F E +WFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QVVL
Sbjct: 86 ALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 145
Query: 167 MGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
MG VEG+RI G P + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFG
Sbjct: 146 MGLVEGFRINGLPGVGDGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFG 205
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
FFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 206 FFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 243
>gi|116788195|gb|ABK24790.1| unknown [Picea sitchensis]
Length = 151
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 138/151 (91%), Positives = 144/151 (95%), Gaps = 3/151 (1%)
Query: 34 MRK-TGSKSV--SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF 90
MRK TG KSV SS SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 1 MRKATGKKSVAASSDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF 60
Query: 91 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 150
AKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P+L
Sbjct: 61 AKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPNL 120
Query: 151 IHAQSILAIWACQVVLMGAVEGYRIAGGPLG 181
+HAQSILAIWACQV+LMGA+EGYR+AGGPLG
Sbjct: 121 VHAQSILAIWACQVILMGAIEGYRVAGGPLG 151
>gi|553065|gb|AAA65447.1| chlorophyll a/b binding protein, partial [Euglena gracilis]
Length = 334
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/198 (68%), Positives = 159/198 (80%), Gaps = 2/198 (1%)
Query: 33 SMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
S +K+ + + + S WYGPDR K+LGP +G+ P+YLTGE PGDYGWDTAGL ADP T A+
Sbjct: 137 SGKKSKAPAADNLSQWYGPDRAKWLGPLTGQVPAYLTGELPGDYGWDTAGLGADPVTLAR 196
Query: 93 NRELEVIHCRWAMLGALGCVFPELLARNGVKFGE-AVWFKAGAQIFSEGGLDYLGNPSLI 151
RE EVIH RWAMLGALG V PELLA NGV FGE AVW+KAGAQIFS GL+YLGNPSLI
Sbjct: 197 YREAEVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLI 256
Query: 152 HAQSILAIWACQVVLMGAVEGYRIAGG-PLGEVTDPLYPGGSFDPLGLADDPEAFAELKV 210
HAQS++ + + +MGAVEGYR GG PLG+ D LYPGG FDPLGLA+DP+AFAELKV
Sbjct: 257 HAQSVVLTFLSTLAIMGAVEGYRYGGGWPLGDDLDRLYPGGPFDPLGLANDPDAFAELKV 316
Query: 211 KEIKNGRLAMFSMFGFFV 228
KE+KNGRLAM +M GF+V
Sbjct: 317 KEVKNGRLAMVAMLGFYV 334
>gi|115790|sp|P15192.1|CB22_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 2;
AltName: Full=Chlorophyll a-b binding protein type II 2;
Short=CAB; AltName: Full=LHCP
gi|169376|gb|AAA33776.1| chlorophyll a/b-binding protein [Pinus sylvestris]
Length = 150
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/150 (90%), Positives = 141/150 (94%)
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
ELL +NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG +EGYR
Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYR 60
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
+ GGPLGE DPLYPG +FDPLGLADDPEA AELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 61 VGGGPLGEGLDPLYPGDAFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTG 120
Query: 235 KGPLENLADHLADPVNNNAWAYATNFVPGK 264
KGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 121 KGPIENLYDHLADPVANNAWAYATNFVPGK 150
>gi|49473448|gb|AAT66413.1| chloroplast light-harvesting complex II, partial [Chlorella
pyrenoidosa]
Length = 179
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/179 (75%), Positives = 150/179 (83%), Gaps = 3/179 (1%)
Query: 81 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 140
AGLSADP+TFA+ RE+EVIH RWAMLGALGC+ PELLA+NG+ FGEAVWFKAGAQIF +G
Sbjct: 1 AGLSADPQTFARYREIEVIHARWAMLGALGCITPELLAKNGIPFGEAVWFKAGAQIFQDG 60
Query: 141 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP---LGEVTDPLYPGGSFDPLG 197
GL+YLGN SL+HAQSILA A QV+LMGA E YR GG GE D LYPGG+FDPLG
Sbjct: 61 GLNYLGNESLVHAQSILATLAVQVLLMGAAESYRANGGAPGGFGEDLDSLYPGGAFDPLG 120
Query: 198 LADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAY 256
LADDP+ AELKVKEIKNGRLAMFSMFGFFVQAIVTG+GP+ NL HL+DP NNAW Y
Sbjct: 121 LADDPDTLAELKVKEIKNGRLAMFSMFGFFVQAIVTGQGPIANLDAHLSDPTGNNAWNY 179
>gi|397789260|gb|AFO67219.1| putative chlorophyll a/b binding protein, partial [Aralia elata]
Length = 155
Score = 276 bits (705), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 139/156 (89%), Positives = 143/156 (91%), Gaps = 2/156 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS S GKAV +APS +EL GRISMRKT +K VSSGSPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSPSLAGKAVKVAPSSSELFGNGRISMRKT-AKPVSSGSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 60 FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 155
NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQS
Sbjct: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 155
>gi|157267420|gb|ABV26426.1| light-harvesting chlorophyll a/b-binding protein [Camellia
sinensis]
Length = 153
Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 135/153 (88%), Positives = 140/153 (91%), Gaps = 1/153 (0%)
Query: 4 STMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSG 62
STMALSS SF GKA+ L+PS +L GRISMRKTG K V SGSPWYGPDRV YLGP SG
Sbjct: 1 STMALSSPSFAGKAIKLSPSTPDLVGRGRISMRKTGGKPVRSGSPWYGPDRVLYLGPLSG 60
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELLARNGV
Sbjct: 61 DPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGV 120
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 155
KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQS
Sbjct: 121 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 153
>gi|117661756|gb|ABK55666.1| chloroplast chlorophyll a/b-binding protein [Cucumis sativus]
Length = 137
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/137 (95%), Positives = 135/137 (98%)
Query: 73 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 132
PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKA
Sbjct: 1 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 60
Query: 133 GAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS 192
G+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVT P+YPGGS
Sbjct: 61 GSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTVPIYPGGS 120
Query: 193 FDPLGLADDPEAFAELK 209
FDPLGLADDPEAFAELK
Sbjct: 121 FDPLGLADDPEAFAELK 137
>gi|190694831|gb|ACE88963.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 181
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 139/186 (74%), Positives = 154/186 (82%), Gaps = 11/186 (5%)
Query: 9 SSSFVGKAVNLAPSGNELSN-----GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGE 63
++SF+G A P +EL GGRI+MR+T KS S WYGPDR KYLGPFS +
Sbjct: 2 TTSFLGTA----PRRDELVRRVGDFGGRITMRRT-VKSAPQ-SIWYGPDRPKYLGPFSEQ 55
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PSYLTGEF GDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L++NGVK
Sbjct: 56 TPSYLTGEFAGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVK 115
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 183
FGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR+ GGPLGE
Sbjct: 116 FGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVGGGPLGEG 175
Query: 184 TDPLYP 189
D +YP
Sbjct: 176 LDKVYP 181
>gi|157987285|gb|ABW07804.1| light-harvesting chlorphyll binding protein 3 [Solenostemon
scutellarioides]
Length = 193
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/182 (78%), Positives = 153/182 (84%), Gaps = 4/182 (2%)
Query: 75 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAG 133
DYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L + V F E VWFKAG
Sbjct: 1 DYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLQKWLNVTFKEPVWFKAG 60
Query: 134 AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGS 192
AQIF+EGGLDYLGNP+L+HAQSILA+ QVV+MG VEG+RI G +GE D LYPGG
Sbjct: 61 AQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVVMGLVEGFRINGLDGVGEGND-LYPGGQ 119
Query: 193 -FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 251
FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV N
Sbjct: 120 YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN 179
Query: 252 NA 253
NA
Sbjct: 180 NA 181
>gi|397789264|gb|AFO67221.1| putative chlorophyll a/b binding protein, partial [Aralia elata]
Length = 152
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/152 (90%), Positives = 139/152 (91%), Gaps = 2/152 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSV-SSGSPWYGPDRVKYLG 58
MA STMALSS SF GKAV +APS +EL GRISMRKTG K V SSGSPWYGPDRVKYLG
Sbjct: 1 MAASTMALSSPSFAGKAVKVAPSSSELFGNGRISMRKTGKKPVASSGSPWYGPDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 150
RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL
Sbjct: 121 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 152
>gi|60650129|dbj|BAD90930.1| chlorophyll a/b-binding protein [Adiantum capillus-veneris]
Length = 215
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 136/192 (70%), Positives = 149/192 (77%), Gaps = 8/192 (4%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNG-----GRISMRKTGSKSVSSGSPWYGPDRVKYL 57
+S +A SS V L P NELS R+ M K SSG+ YG DR+ YL
Sbjct: 9 SSVVAFLSSSVFSGQQLKPV-NELSRKVGTSEARVQM--MAPKKSSSGNIRYGADRLLYL 65
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL
Sbjct: 66 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 125
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
A+NGVKFGEAVWFKAG+QIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+A
Sbjct: 126 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAV 185
Query: 178 GPLGEVTDPLYP 189
PL + P P
Sbjct: 186 VPLVRLRTPSTP 197
>gi|302854483|ref|XP_002958749.1| hypothetical protein VOLCADRAFT_108288 [Volvox carteri f.
nagariensis]
gi|300255924|gb|EFJ40205.1| hypothetical protein VOLCADRAFT_108288 [Volvox carteri f.
nagariensis]
Length = 2775
Score = 263 bits (671), Expect = 7e-68, Method: Composition-based stats.
Identities = 124/153 (81%), Positives = 138/153 (90%)
Query: 108 ALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLM 167
ALGC+ PELL++NGV+FGEAVWFKAGAQIF EGGLDYLGNPSL+HAQ+I+A ACQV+LM
Sbjct: 2614 ALGCLTPELLSKNGVQFGEAVWFKAGAQIFQEGGLDYLGNPSLVHAQNIVATLACQVILM 2673
Query: 168 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 227
G VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFF
Sbjct: 2674 GLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFF 2733
Query: 228 VQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
VQAIVTGKGP+ENL DHLA+P NNA+A+AT F
Sbjct: 2734 VQAIVTGKGPIENLNDHLANPAVNNAFAFATKF 2766
>gi|449515811|ref|XP_004164941.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like,
partial [Cucumis sativus]
Length = 149
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/149 (85%), Positives = 135/149 (90%), Gaps = 1/149 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA S+MALSS SF GK V L PS EL R++MRK+ +KSVSSGSPWYGPDRVKYLGP
Sbjct: 1 MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNP 148
NGVKFGEAVWFKAG+QIFSEGGLDYLGNP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNP 149
>gi|459020|gb|AAA16605.1| light harvesting chlorophyll a/b binding protein of PSII, partial
[Euglena gracilis]
Length = 322
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 128/186 (68%), Positives = 149/186 (80%), Gaps = 2/186 (1%)
Query: 33 SMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
S +K+ + + + S WYGPDR K+LGP +G+ P+YLTGE PGDYGWDTAGL ADP T A+
Sbjct: 137 SGKKSKAPAADNLSQWYGPDRAKWLGPLTGQVPAYLTGELPGDYGWDTAGLGADPVTLAR 196
Query: 93 NRELEVIHCRWAMLGALGCVFPELLARNGVKFGE-AVWFKAGAQIFSEGGLDYLGNPSLI 151
RE EVIH RWAMLGALG V PELLA NGV FGE AVW+KAGAQIFS GL+YLGNPSLI
Sbjct: 197 YREAEVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLI 256
Query: 152 HAQSILAIWACQVVLMGAVEGYRIAGG-PLGEVTDPLYPGGSFDPLGLADDPEAFAELKV 210
HAQS++ + + +MGAVEGYR GG PLG+ D LYPGG FDPLGLA+DP+AFAELKV
Sbjct: 257 HAQSVVLTFLSTLAIMGAVEGYRYGGGWPLGDDLDRLYPGGPFDPLGLANDPDAFAELKV 316
Query: 211 KEIKNG 216
KE+KNG
Sbjct: 317 KEVKNG 322
>gi|169199|gb|AAA33703.1| Major Cab protein [Petunia x hybrida]
Length = 136
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/136 (91%), Positives = 129/136 (94%)
Query: 129 WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLY 188
W A +QIFSEG LDYLGNPSLIHAQSILA+WACQVVLMGAVEGYR+AGGPLGEV DPL
Sbjct: 1 WIPAVSQIFSEGELDYLGNPSLIHAQSILAVWACQVVLMGAVEGYRVAGGPLGEVIDPLC 60
Query: 189 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP ENLADHLADP
Sbjct: 61 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPFENLADHLADP 120
Query: 249 VNNNAWAYATNFVPGK 264
VNNNAW+YATNFVPGK
Sbjct: 121 VNNNAWSYATNFVPGK 136
>gi|305377032|dbj|BAJ15879.1| chlorophyll a/b binding protein-like protein [Torenia fournieri]
Length = 129
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/125 (99%), Positives = 125/125 (100%)
Query: 140 GGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 199
GGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA
Sbjct: 5 GGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 64
Query: 200 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 259
DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN
Sbjct: 65 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 124
Query: 260 FVPGK 264
FVPGK
Sbjct: 125 FVPGK 129
>gi|1165248|gb|AAA85589.1| chlorophyll a/b binding protein of PS II, partial [Picea abies]
Length = 131
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/130 (91%), Positives = 129/130 (99%)
Query: 135 QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFD 194
QIFSEGGLDYLG+P+L+HAQSILAIWACQV+LMGA+EGYR+AGGPLGEVTDP+YPGG+FD
Sbjct: 2 QIFSEGGLDYLGSPNLVHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFD 61
Query: 195 PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 254
PLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL NLADHLADPVNNNAW
Sbjct: 62 PLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLXNLADHLADPVNNNAW 121
Query: 255 AYATNFVPGK 264
AYATNFVPGK
Sbjct: 122 AYATNFVPGK 131
>gi|169201|gb|AAA33704.1| Major Cab protein [Petunia x hybrida]
Length = 129
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/129 (94%), Positives = 126/129 (97%)
Query: 134 AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSF 193
+QIFSEG LDYLGNPSL+HAQSILA WACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSF
Sbjct: 1 SQIFSEGELDYLGNPSLVHAQSILASWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSF 60
Query: 194 DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA
Sbjct: 61 DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 120
Query: 254 WAYATNFVP 262
W+YATNFVP
Sbjct: 121 WSYATNFVP 129
>gi|338746088|emb|CCC15093.1| putative chloroplast light-harvesting complex II protein precursor
[Lepidodinium chlorophorum]
Length = 215
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 157/209 (75%), Gaps = 8/209 (3%)
Query: 33 SMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
+MR+T + + + P+R +LGP++G PSYL G GDYGWDT+GLS PE +
Sbjct: 12 AMRRTTAATSA-------PERPLWLGPYTGATPSYLDGSLVGDYGWDTSGLSTTPEALLR 64
Query: 93 NRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLI 151
NRELE++H RWAMLGALG + PELLA G E VWFKAGAQIFS GGLDYLGNPSL+
Sbjct: 65 NRELELLHARWAMLGALGSLLPELLATYAGTPLLEPVWFKAGAQIFSPGGLDYLGNPSLV 124
Query: 152 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVK 211
HAQSILAI QV+LMG EGYR+AGGPLGEV D LYPG SFDPLG ++DPE+ EL+ K
Sbjct: 125 HAQSILAILGFQVLLMGLSEGYRLAGGPLGEVGDALYPGASFDPLGFSEDPESLLELQTK 184
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
EIKNGRLAM +M G + QA+VTGKGP+ N
Sbjct: 185 EIKNGRLAMLAMLGMYTQALVTGKGPVSN 213
>gi|305377030|dbj|BAJ15878.1| chlorophyll a/b binding protein-like protein [Torenia fournieri]
Length = 125
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/125 (98%), Positives = 124/125 (99%)
Query: 140 GGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 199
GGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA
Sbjct: 1 GGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 60
Query: 200 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 259
DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD LADPVNNNAWAYATN
Sbjct: 61 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADGLADPVNNNAWAYATN 120
Query: 260 FVPGK 264
FVPGK
Sbjct: 121 FVPGK 125
>gi|168812218|gb|ACA30285.1| putative chlorophyll A-B binding protein type I [Cupressus
sempervirens]
Length = 134
Score = 249 bits (636), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 120/134 (89%), Positives = 126/134 (94%)
Query: 127 AVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP 186
AVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG +EGYR+ GGPLGE DP
Sbjct: 1 AVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDP 60
Query: 187 LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 246
LYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAM SMFGFFVQAIVTGKGP+ENL DHLA
Sbjct: 61 LYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMSSMFGFFVQAIVTGKGPIENLYDHLA 120
Query: 247 DPVNNNAWAYATNF 260
DP NNAWAYATNF
Sbjct: 121 DPSTNNAWAYATNF 134
>gi|6446570|dbj|BAA78595.1| hypothetical protein [Chlamydomonas sp. HS-5]
Length = 222
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/201 (65%), Positives = 149/201 (74%), Gaps = 12/201 (5%)
Query: 26 LSNGGRISMRKTGSKS---VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAG 82
L GR +R G +S ++ +YGPDR K+LGPFS + PSYLTGEFPGDYGWDTAG
Sbjct: 8 LVRQGR-CLRAQGERSTSVIARAVEFYGPDRAKWLGPFSDDTPSYLTGEFPGDYGWDTAG 66
Query: 83 LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGL 142
LSADPETFA+ RE+EVIH RWAMLGALGC+ PEL+ G E VWFKAGAQIFSEGGL
Sbjct: 67 LSADPETFARYREIEVIHARWAMLGALGCITPELI---GGDIAEPVWFKAGAQIFSEGGL 123
Query: 143 DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG----GPLGEVTDPLYPGGSFDPLGL 198
DYLGNPSL+HAQSI+A A QV+LMG E +R AG G GE D LYPG +FDPL
Sbjct: 124 DYLGNPSLVHAQSIIATLAVQVILMGQAEAFRAAGYVVPGGFGEDLDNLYPGDAFDPLAW 183
Query: 199 ADDPEAFAELKVKEIKNGRLA 219
P+ FAELKVKEIKNGRLA
Sbjct: 184 L-IPDTFAELKVKEIKNGRLA 203
>gi|32307466|gb|AAP79138.1| chlorophyll a/b-binding protein II 2 [Bigelowiella natans]
Length = 346
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 153/213 (71%), Gaps = 4/213 (1%)
Query: 48 WYGPDRVKYL-GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
WYGPDR K+L F P YLTGE+PGDYGWD GLS+DPETFA RE E++H RWAML
Sbjct: 125 WYGPDRPKWLPDAFLAGVPDYLTGEYPGDYGWDALGLSSDPETFANYREAELLHARWAML 184
Query: 107 GALGCVFPELLARN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 165
GALGC+FPE+LA N GV E VWFKAGA + ++ +DYLG+P L+HA SI+AI A QV+
Sbjct: 185 GALGCIFPEILAMNYGVGLEEPVWFKAGALVLNDKSIDYLGSPQLVHASSIIAIAAAQVL 244
Query: 166 LMGAVEGYRIAG-GPLGEVTDPLYPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
LMG E YR +G P GE D ++PGG F+PL D AELKVKEIKNGRLAMFSM
Sbjct: 245 LMGGAEAYRASGVAPNGEEFDKMHPGGYYFNPLKFGKDEADLAELKVKEIKNGRLAMFSM 304
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNNAWAY 256
GF++QA TG GPL+NL DH AD N N + Y
Sbjct: 305 LGFYIQAATTGNGPLQNLVDHRADAANENIFKY 337
>gi|169197|gb|AAA33702.1| Major Cab protein [Petunia x hybrida]
Length = 125
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/125 (95%), Positives = 123/125 (98%)
Query: 140 GGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 199
G LDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA
Sbjct: 1 GELDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLA 60
Query: 200 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 259
+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATN
Sbjct: 61 EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATN 120
Query: 260 FVPGK 264
FVPGK
Sbjct: 121 FVPGK 125
>gi|356532722|ref|XP_003534920.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
[Glycine max]
Length = 125
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/122 (96%), Positives = 121/122 (99%)
Query: 143 DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDP 202
DYLGNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP
Sbjct: 4 DYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDP 63
Query: 203 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
EAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP
Sbjct: 64 EAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 123
Query: 263 GK 264
GK
Sbjct: 124 GK 125
>gi|357496383|ref|XP_003618480.1| Chlorophyll a/b binding protein [Medicago truncatula]
gi|355493495|gb|AES74698.1| Chlorophyll a/b binding protein [Medicago truncatula]
Length = 180
Score = 243 bits (620), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/130 (89%), Positives = 123/130 (94%)
Query: 135 QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFD 194
QIFS+GGLDYLGNPSL+HAQSILAIW +LMGAVEGYRIA GPLGEV DPLYPGGSFD
Sbjct: 51 QIFSDGGLDYLGNPSLVHAQSILAIWVVLAILMGAVEGYRIADGPLGEVVDPLYPGGSFD 110
Query: 195 PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 254
PLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVT KGPLENLADH+ADPVN+NAW
Sbjct: 111 PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKGPLENLADHIADPVNSNAW 170
Query: 255 AYATNFVPGK 264
A+ATNFVPGK
Sbjct: 171 AFATNFVPGK 180
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 220 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
MFSMFGFFVQAIVTGKGPLENLADH+ DPVNNNAWA+ATNFVPG
Sbjct: 1 MFSMFGFFVQAIVTGKGPLENLADHITDPVNNNAWAFATNFVPGN 45
>gi|302143545|emb|CBI22106.3| unnamed protein product [Vitis vinifera]
Length = 147
Score = 242 bits (618), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 140/233 (60%), Positives = 144/233 (61%), Gaps = 88/233 (37%)
Query: 34 MRKT--GSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 91
MRK+ SK+VSSGSPWYGPDRVKYLGPFS ADPETFA
Sbjct: 1 MRKSVAKSKAVSSGSPWYGPDRVKYLGPFS-----------------------ADPETFA 37
Query: 92 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLI 151
KNRELEVIHCRWAMLGALGCVFPELL+RNGVKFGEAV
Sbjct: 38 KNRELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAV----------------------- 74
Query: 152 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVK 211
+LMGAVEGYRIAGGPLGEV K
Sbjct: 75 -------------ILMGAVEGYRIAGGPLGEV---------------------------K 94
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 95 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 147
>gi|55668304|gb|AAV54188.1| chloroplast major light-harvesting complex II protein m9
[Haematococcus pluvialis]
Length = 152
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/151 (77%), Positives = 130/151 (86%)
Query: 112 VFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVE 171
V PELLA NGV FGE VWFKAGAQIF +GGL+YLGNPSLIHAQ+I+A A QV+LMG VE
Sbjct: 1 VTPELLAANGVSFGEPVWFKAGAQIFQDGGLNYLGNPSLIHAQNIVATLAVQVILMGLVE 60
Query: 172 GYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 231
GYR+ GGP GE DPLYPG +FDPLGLADDP+ FAELKVKEIKNGRLAMFS FGFFVQAI
Sbjct: 61 GYRMNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAI 120
Query: 232 VTGKGPLENLADHLADPVNNNAWAYATNFVP 262
VTGKGP++NL DHLA+P NNA+A+AT F P
Sbjct: 121 VTGKGPIQNLTDHLANPAENNAFAFATKFTP 151
>gi|914283|gb|AAB34067.1| light-harvesting complex b type 2, Lhcb2 [Ginkgo biloba, 3-4 week
old seedlings, Peptide Partial, 130 aa]
Length = 130
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/131 (88%), Positives = 125/131 (95%), Gaps = 1/131 (0%)
Query: 134 AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSF 193
+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRIAG P G + DPLYPGG+F
Sbjct: 1 SQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRIAGDPSGGL-DPLYPGGAF 59
Query: 194 DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
DPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLADPVNNNA
Sbjct: 60 DPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVNNNA 119
Query: 254 WAYATNFVPGK 264
WA+ATNFVPGK
Sbjct: 120 WAFATNFVPGK 130
>gi|115821|sp|P14275.1|CB2C_SOLLC RecName: Full=Chlorophyll a-b binding protein 1C, chloroplastic;
AltName: Full=LHCII type I CAB-1C; Short=LHCP; Flags:
Precursor
Length = 265
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/116 (96%), Positives = 115/116 (99%)
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAEL
Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 209
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 210 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK 40
MA +TMALSS SF G+AV L+PS +E+S GRI+MRK +K
Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAK 41
>gi|224928|prf||1204205C protein 1C,chlorophyll binding
Length = 165
Score = 236 bits (602), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 112/116 (96%), Positives = 115/116 (99%)
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAEL
Sbjct: 50 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 109
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 110 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 165
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 64/132 (48%), Gaps = 28/132 (21%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPD------- 52
MA +TMALSS SF G+AV L+PS +E+S GRI+MRK +KS S SPW
Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWSLVHAQSILAI 60
Query: 53 ---RVKYLGPFSGE-----------PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 98
+V +G G P Y G F D GL+ DPE FA+ + E+
Sbjct: 61 WACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSF------DPLGLAEDPEAFAELKVKEI 114
Query: 99 IHCRWAMLGALG 110
+ R AM G
Sbjct: 115 KNGRLAMFSMFG 126
>gi|82077|pir||F24039 chlorophyll a/b-binding protein 3B precursor - tomato (fragments)
gi|224931|prf||1204205F protein 3B,chlorophyll binding
Length = 167
Score = 236 bits (601), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 113/120 (94%), Positives = 118/120 (98%), Gaps = 1/120 (0%)
Query: 146 GNP-SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEA 204
G+P SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEA
Sbjct: 48 GSPWSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEA 107
Query: 205 FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 108 FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 167
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 66/134 (49%), Gaps = 30/134 (22%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGS--KSVSSGSPWYGPD----- 52
MA STMALSSS F GKAV L+PS +E+S GRI+MRKT + K SSGSPW
Sbjct: 1 MAASTMALSSSTFAGKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPWSLVHAQSIL 60
Query: 53 -----RVKYLGPFSGE-----------PPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
+V +G G P Y G F D GL+ DPE FA+ +
Sbjct: 61 AIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSF------DPLGLAEDPEAFAELKVK 114
Query: 97 EVIHCRWAMLGALG 110
E+ + R AM G
Sbjct: 115 EIKNGRLAMFSMFG 128
>gi|82076|pir||E24039 chlorophyll a/b-binding protein 3A precursor - tomato (fragments)
gi|224930|prf||1204205E protein 3A,chlorophyll binding
Length = 167
Score = 236 bits (601), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 113/120 (94%), Positives = 118/120 (98%), Gaps = 1/120 (0%)
Query: 146 GNP-SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEA 204
G+P SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEA
Sbjct: 48 GSPWSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEA 107
Query: 205 FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 108 FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 167
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 65/134 (48%), Gaps = 30/134 (22%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGS--KSVSSGSPWYGPD----- 52
MA STMALSSS F GK V LAPS +E++ GRI+MRKT + K SSGSPW
Sbjct: 1 MAASTMALSSSTFAGKTVKLAPSSSEITGNGRITMRKTAAKPKPASSGSPWSLVHAQSIL 60
Query: 53 -----RVKYLGPFSG-----------EPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
+V +G G P Y G F D GL+ DPE FA+ +
Sbjct: 61 AIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSF------DPLGLAEDPEAFAELKVK 114
Query: 97 EVIHCRWAMLGALG 110
E+ + R AM G
Sbjct: 115 EIKNGRLAMFSMFG 128
>gi|115824|sp|P14277.1|CB2F_SOLLC RecName: Full=Chlorophyll a-b binding protein 3B, chloroplastic;
AltName: Full=LHCII type I CAB-3B; Short=LHCP; Flags:
Precursor
Length = 267
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/116 (95%), Positives = 115/116 (99%)
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAEL
Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 211
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 212 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 39/51 (76%), Gaps = 3/51 (5%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGS--KSVSSGSPW 48
MA STMALSSS F GKAV L+PS +E+S GRI+MRKT + K SSGSPW
Sbjct: 1 MAASTMALSSSTFAGKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPW 51
>gi|115823|sp|P14276.1|CB2E_SOLLC RecName: Full=Chlorophyll a-b binding protein 3A, chloroplastic;
AltName: Full=LHCII type I CAB-3A; Short=LHCP; Flags:
Precursor
Length = 267
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/116 (95%), Positives = 115/116 (99%)
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAEL
Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 211
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 212 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 38/51 (74%), Gaps = 3/51 (5%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGS--KSVSSGSPW 48
MA STMALSSS F GK V LAPS +E++ GRI+MRKT + K SSGSPW
Sbjct: 1 MAASTMALSSSTFAGKTVKLAPSSSEITGNGRITMRKTAAKPKPASSGSPW 51
>gi|115816|sp|P14274.1|CB2A_SOLLC RecName: Full=Chlorophyll a-b binding protein 1A, chloroplastic;
AltName: Full=LHCII type I CAB-1A; Short=LHCP; Flags:
Precursor
Length = 265
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/116 (96%), Positives = 115/116 (99%)
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAEL
Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 209
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 210 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 9 SSSFVGKAVNLAPSGNELSNGGRISMRKTGSK 40
S SF G+AV L+PS +E S GRI+MRK +K
Sbjct: 10 SPSFAGQAVKLSPSASENSGNGRITMRKAVAK 41
>gi|693924|gb|AAA80595.1| chlorophyll a/b binding protein, partial [Solanum tuberosum]
Length = 135
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/135 (84%), Positives = 122/135 (90%), Gaps = 1/135 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS SF G+AV L+PS +E++ GRI+MRK +KS S SPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSPSFAGQAVKLSPSASEITGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGA 134
NGVKFGEAVWFKAG+
Sbjct: 121 NGVKFGEAVWFKAGS 135
>gi|82074|pir||A24039 chlorophyll a/b-binding protein 1A precursor - tomato (fragments)
gi|224926|prf||1204205A protein 1A,chlorophyll binding
Length = 165
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/116 (96%), Positives = 115/116 (99%)
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAEL
Sbjct: 50 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 109
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 110 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 165
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 55/123 (44%), Gaps = 27/123 (21%)
Query: 9 SSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPD----------RVKYLG 58
S SF G+AV L+PS +E S GRI+MRK +KS S SPW +V +G
Sbjct: 10 SPSFAGQAVKLSPSASENSGNGRITMRKAVAKSAPSSSPWSLVHAQSILAIWACQVVLMG 69
Query: 59 PFSGE-----------PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
G P Y G F D GL+ DPE FA+ + E+ + R AM
Sbjct: 70 AVEGYRIAGGPLGEVVDPLYPGGSF------DPLGLAEDPEAFAELKVKEIKNGRLAMFS 123
Query: 108 ALG 110
G
Sbjct: 124 MFG 126
>gi|149941244|emb|CAO02554.1| putative LHCII type III chlorophyll a/b binding protein [Vigna
unguiculata]
Length = 211
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/196 (65%), Positives = 145/196 (73%), Gaps = 12/196 (6%)
Query: 14 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 73
GK N P + +S G TG ++S+ WYGPDRVKYLGPFS + PSYL GEFP
Sbjct: 25 GKGANANPLRDAVSMG-------TGKYTMSN-DLWYGPDRVKYLGPFSAQTPSYLKGEFP 76
Query: 74 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKA 132
GDYGWDTAGLSADPE FAKNR LEVIH RWA+LGALGC+ PE+L + V F E VWFKA
Sbjct: 77 GDYGWDTAGLSADPEAFAKNRALEVIHGRWALLGALGCITPEVLGKWLRVDFKEPVWFKA 136
Query: 133 GAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGG 191
GAQIFSEGGLDYLGNP+L+HAQSILA+ QVVLMG EG+RI G +GE + LYP G
Sbjct: 137 GAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLAEGFRINGLDGVGEGNN-LYPXG 195
Query: 192 S-FDPLGLADDPEAFA 206
FDPLGLADDP FA
Sbjct: 196 QYFDPLGLADDPTTFA 211
>gi|515616|emb|CAA43802.1| LHC II Type III chlorophyll a /b binding protein [Brassica napus]
Length = 202
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 144/201 (71%), Gaps = 4/201 (1%)
Query: 4 STMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGE 63
ST SSS + L + N R ++ K WYGPDRVKYLGPFS +
Sbjct: 3 STFMSSSSVLTPTPFLGQTKGSTFNPLRDAVSLGSPKYTMGNDLWYGPDRVKYLGPFSVQ 62
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGV 122
PSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L + V
Sbjct: 63 TPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLQKWVRV 122
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLG 181
F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG VEG+RI G +G
Sbjct: 123 DFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVG 182
Query: 182 EVTDPLYPGGS-FDPLGLADD 201
E D LYPGG FDPLGLADD
Sbjct: 183 EGND-LYPGGQYFDPLGLADD 202
>gi|225690800|gb|ACO06086.1| chlorophyll a-b binding protein [Triticum aestivum]
Length = 215
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 149/213 (69%), Gaps = 23/213 (10%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN-----GGRISMRKTGSKSVSSGSPWYGPDRVK 55
MA S + ++SF+G A P ++L GGRI+MR+T + S WYGPDR K
Sbjct: 1 MAASALHQTTSFLGTA----PRRDDLVRSVGDFGGRITMRRTVKSAPQS--IWYGPDRPK 54
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 55 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 114
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
+L +NG+KFGEAVWFKAG QIF EGGLDYLG+P+L+HAQS L I L GA +
Sbjct: 115 ILCKNGLKFGEAVWFKAGPQIFFEGGLDYLGHPNLVHAQSFLPI------LGGASGAHEA 168
Query: 176 AGGPLGEVTDPL------YPGGSFDPLGLADDP 202
+ V PL YPGG+ PLGL+ DP
Sbjct: 169 SSRATVLVAAPLLGPDIIYPGGALYPLGLSADP 201
>gi|115822|sp|P10707.1|CB2D_SOLLC RecName: Full=Chlorophyll a-b binding protein 1D; AltName:
Full=LHCII type I CAB-1D; Short=LHCP
gi|170428|gb|AAA34158.1| chlorophyll a/b-binding protein Cab-1D, partial [Solanum
lycopersicum]
gi|224929|prf||1204205D protein 1D,chlorophyll binding
Length = 116
Score = 233 bits (594), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 112/116 (96%), Positives = 115/116 (99%)
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAEL
Sbjct: 1 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 60
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 61 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 116
>gi|170409|gb|AAA34150.1| chlorophyll a/b-binding protein Cab-1A, partial [Solanum
lycopersicum]
gi|170414|gb|AAA34152.1| chlorophyll a/b-binding protein Cab-1C, partial [Solanum
lycopersicum]
Length = 116
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 112/116 (96%), Positives = 115/116 (99%)
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAEL
Sbjct: 1 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 60
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 61 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 116
>gi|297740653|emb|CBI30835.3| unnamed protein product [Vitis vinifera]
Length = 148
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/178 (69%), Positives = 126/178 (70%), Gaps = 51/178 (28%)
Query: 87 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG 146
P TFAKNRELEVIHCRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGAQIFSE
Sbjct: 22 PNTFAKNRELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSE------- 74
Query: 147 NPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFA 206
V+LMGAVEGYRIAGGPLGEV
Sbjct: 75 -----------------VILMGAVEGYRIAGGPLGEV----------------------- 94
Query: 207 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 95 ----KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 148
>gi|209778961|gb|ACI87791.1| putative chloroplast chlorophyll a/b-binding protein [Cupressus
sempervirens]
Length = 124
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/124 (89%), Positives = 118/124 (95%)
Query: 122 VKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG 181
+KFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG +EGYR+ GGPLG
Sbjct: 1 IKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLG 60
Query: 182 EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
E DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL
Sbjct: 61 EGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 120
Query: 242 ADHL 245
DH
Sbjct: 121 YDHF 124
>gi|170421|gb|AAA34155.1| chlorophyll a/b-binding protein Cab-3A, partial [Solanum
lycopersicum]
gi|170426|gb|AAA34157.1| chlorophyll a/b-binding protein Cab-3B, partial [Solanum
lycopersicum]
Length = 116
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/116 (95%), Positives = 115/116 (99%)
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAEL
Sbjct: 1 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 60
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 61 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 116
>gi|116785674|gb|ABK23816.1| unknown [Picea sitchensis]
Length = 166
Score = 229 bits (585), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 116/157 (73%), Positives = 128/157 (81%), Gaps = 8/157 (5%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MAT++ SSS G+ + L P NEL ++ RI+MR+T + S WYGPDR K
Sbjct: 1 MATASAIQSSSLAGQTL-LRPHQNELVKKVGASQARITMRRTVRSAPES--IWYGPDRPK 57
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE
Sbjct: 58 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIH 152
LLA+ GVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIH
Sbjct: 118 LLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 154
>gi|193872610|gb|ACF23033.1| ST140, partial [Eutrema halophilum]
Length = 141
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 113/141 (80%), Positives = 126/141 (89%), Gaps = 2/141 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLG 58
MA STMALSS +F GKAV ++P+ +E+ GR++MRKT +K SGSPWYG DRVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVKISPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGEPPSYLTGEFPG+YGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGEPPSYLTGEFPGNYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 119 RNGVKFGEAVWFKAGAQIFSE 139
RNGVKFG+AVWFKAG+QIFSE
Sbjct: 121 RNGVKFGKAVWFKAGSQIFSE 141
>gi|159138421|gb|ABW89213.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138423|gb|ABW89214.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138425|gb|ABW89215.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138429|gb|ABW89217.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138433|gb|ABW89219.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138437|gb|ABW89221.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138439|gb|ABW89222.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138441|gb|ABW89223.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138443|gb|ABW89224.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138445|gb|ABW89225.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138447|gb|ABW89226.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138451|gb|ABW89228.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138453|gb|ABW89229.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138455|gb|ABW89230.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138457|gb|ABW89231.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
Length = 116
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/116 (95%), Positives = 113/116 (97%)
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SLIHAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAEL
Sbjct: 1 SLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEL 60
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW+YATNFVPGK
Sbjct: 61 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPGK 116
>gi|227202590|dbj|BAH56768.1| AT5G54270 [Arabidopsis thaliana]
Length = 162
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/162 (74%), Positives = 133/162 (82%), Gaps = 4/162 (2%)
Query: 105 MLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA GC+ PE+L + V F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ Q
Sbjct: 1 MLGAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 60
Query: 164 VVLMGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMF 221
V+LMG VEG+RI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMF
Sbjct: 61 VILMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 119
Query: 222 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
SMFGFFVQAIVTGKGPLENL DHL +PV NNAWA+AT F PG
Sbjct: 120 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWAFATKFAPG 161
>gi|13676408|dbj|BAB41193.1| type III chlorophyll a/b-binding protein [Amaranthus tricolor]
Length = 156
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/157 (77%), Positives = 131/157 (83%), Gaps = 4/157 (2%)
Query: 75 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAG 133
DYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L + V F E VWFKAG
Sbjct: 1 DYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLQKWVRVSFKEPVWFKAG 60
Query: 134 AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGS 192
AQIFSEGGLDYLGNP+L+HAQSILA+ QVVLMG VEG+RI G +GE D LYPGG
Sbjct: 61 AQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQ 119
Query: 193 -FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 228
FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFV
Sbjct: 120 YFDPLGLADDPVPFAELKVKEIKNGRLAMFSMFGFFV 156
>gi|159138427|gb|ABW89216.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138431|gb|ABW89218.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138435|gb|ABW89220.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
Length = 116
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 110/116 (94%), Positives = 112/116 (96%)
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SLIHAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAEL
Sbjct: 1 SLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEL 60
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW+YATNFVPG
Sbjct: 61 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPGN 116
>gi|159138449|gb|ABW89227.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
Length = 116
Score = 226 bits (576), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 110/116 (94%), Positives = 112/116 (96%)
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SLIHAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDP AFAEL
Sbjct: 1 SLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPXAFAEL 60
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW+YATNFVPGK
Sbjct: 61 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPGK 116
>gi|115776|sp|P14584.1|CB21_RAPSA RecName: Full=Chlorophyll a-b binding of LHCII type 1 protein;
AltName: Full=Chlorophyll a-b binding of LHCII type I
protein; Short=CAB; Short=LHCP
gi|21100|emb|CAA34640.1| chlorophyll a/b binding protein (124 AA) [Raphanus sativus]
Length = 124
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/124 (89%), Positives = 115/124 (92%), Gaps = 1/124 (0%)
Query: 142 LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLAD 200
LDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG GPLGE D LYPGGSFDPL
Sbjct: 1 LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLASLT 60
Query: 201 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNF
Sbjct: 61 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 120
Query: 261 VPGK 264
VPGK
Sbjct: 121 VPGK 124
>gi|210162116|gb|ACJ09656.1| putative chloroplast light harvesting chlorophyll a/b binding
protein [Cupressus sempervirens]
Length = 169
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 143/187 (76%), Positives = 152/187 (81%), Gaps = 21/187 (11%)
Query: 30 GRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 88
R++MRK + SVS S SPWYGPDRV YL P SGEPPSYLTGEFPGDY WDTA L ADPE
Sbjct: 2 ARVTMRKATTVSVSASTSPWYGPDRVLYLEP-SGEPPSYLTGEFPGDY-WDTARL-ADPE 58
Query: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 148
T AKNRELEVIHCR +MLGALGCV ELLARNGV EAVWF GAQI GLDYL P
Sbjct: 59 T-AKNRELEVIHCR-SMLGALGCV--ELLARNGVF--EAVWFN-GAQI--SVGLDYL--P 107
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
SL+HAQSILAI +CQV+LMGAVEGYRIA GPLG VTDP+Y GSFDPL LADDP+AFAEL
Sbjct: 108 SLVHAQSILAI-SCQVILMGAVEGYRIASGPLG-VTDPIY-HGSFDPL-LADDPDAFAEL 163
Query: 209 KVKEIKN 215
KV IKN
Sbjct: 164 KV--IKN 168
>gi|302808391|ref|XP_002985890.1| light-harvesting complex [Selaginella moellendorffii]
gi|300146397|gb|EFJ13067.1| light-harvesting complex [Selaginella moellendorffii]
Length = 320
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/261 (48%), Positives = 154/261 (59%), Gaps = 10/261 (3%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSG 62
T+ A+++S +GK + + + S S W+G DR K+LGP
Sbjct: 54 TAVKAIANSSLGKQLQERMQETKAAAENSRSAVDAARMRARDASVWFGQDRPKWLGPIPY 113
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN-G 121
+ P +L G FPGDYG+D AGL DP F K E++H RWAML ALG V PE+L + G
Sbjct: 114 DYPDHLQGSFPGDYGFDIAGLGKDPAKFDKFFNFEILHARWAMLAALGVVIPEVLEKFFG 173
Query: 122 VKFGEAVWFKAGAQIFSEGGLDYLGNPSL--IHAQSILAIWACQVVLMGAVEGYRIAG-- 177
VKF E+VW++ G LDYLG P L + AQ IL I CQ +LM E R G
Sbjct: 174 VKFAESVWWRVGYAKLEGDTLDYLGIPGLHIVGAQGILVIAICQFLLMVGPEYARYCGIE 233
Query: 178 --GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 232
PLG D YPGG FDPLGL+ DP F ELKVKEIKNGRLAM + GF+VQA+V
Sbjct: 234 ALEPLGIYLPGDINYPGGVLFDPLGLSKDPATFEELKVKEIKNGRLAMVAWLGFYVQALV 293
Query: 233 TGKGPLENLADHLADPVNNNA 253
T KGPLENL DHL DP++NNA
Sbjct: 294 TKKGPLENLLDHLQDPLHNNA 314
>gi|162461137|ref|NP_001105374.1| chlorophyll a/b-binding apoprotein CP26 precursor [Zea mays]
gi|733456|gb|AAA64415.1| chlorophyll a/b-binding apoprotein CP26 precursor [Zea mays]
Length = 283
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 146/230 (63%), Gaps = 17/230 (7%)
Query: 35 RKTGSKSVSSGSP--------WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGL 83
+K +VSS SP WYGPDR YL E P YLTGE PGDYG+D GL
Sbjct: 44 QKPKPAAVSSSSPDISDELAKWYGPDRRIYLPDGLLDRSEVPEYLTGEVPGDYGYDPFGL 103
Query: 84 SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGL 142
PE FAK + E+IH RWAMLGA G V PE + G G EAVWFK GA + L
Sbjct: 104 GKKPEDFAKYQAYELIHARWAMLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTL 163
Query: 143 DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDP 202
+Y GN I ++A+ A +VVL+G E YRI G ++ D L+PGG FDPLGLA DP
Sbjct: 164 NYFGNS--IPINLVVAVIA-EVVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLASDP 218
Query: 203 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
+ A LKVKEIKNGRLAMFSMF FF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 DQAAILKVKEIKNGRLAMFSMFAFFIQAYVTGEGPVENLAKHLSDPFGNN 268
>gi|194697528|gb|ACF82848.1| unknown [Zea mays]
Length = 283
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 124/230 (53%), Positives = 146/230 (63%), Gaps = 17/230 (7%)
Query: 35 RKTGSKSVSSGSP--------WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGL 83
+K +VSS SP WYGPDR YL E P YLTGE PGDYG+D GL
Sbjct: 44 QKPKPAAVSSSSPDISDELAKWYGPDRRIYLPDGLLDRSEVPEYLTGEVPGDYGYDPFGL 103
Query: 84 SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGL 142
PE FAK + E+IH RWAMLGA G V PE + G G EAVWFK GA + L
Sbjct: 104 GKKPEDFAKYQAYELIHARWAMLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTL 163
Query: 143 DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDP 202
+Y GN I ++A+ A +V+L+G E YRI G ++ D L+PGG FDPLGLA DP
Sbjct: 164 NYFGNS--IPINLVVAVIA-EVILVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLASDP 218
Query: 203 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
+ A LKVKEIKNGRLAMFSMF FF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 DQAAILKVKEIKNGRLAMFSMFAFFIQAYVTGEGPVENLAKHLSDPFGNN 268
>gi|162461210|ref|NP_001105698.1| light harvesting chlorophyll a/b binding protein5 precursor [Zea
mays]
gi|733454|gb|AAA64414.1| chlorophyll a/b-binding apoprotein CP26 precursor [Zea mays]
gi|414591311|tpg|DAA41882.1| TPA: chlorophyll a/b-binding apoprotein CP26 Precursor [Zea mays]
Length = 283
Score = 216 bits (550), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 145/230 (63%), Gaps = 17/230 (7%)
Query: 35 RKTGSKSVSSGSP--------WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGL 83
+K +VSS SP WYGPDR YL E P YLTGE PGDYG+D GL
Sbjct: 44 QKPKPSAVSSSSPDISDELAKWYGPDRRIYLPDGLLDRSEVPEYLTGEVPGDYGYDPFGL 103
Query: 84 SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGL 142
PE FAK + E+IH RWAMLGA G V PE + G G EAVWFK GA + L
Sbjct: 104 GKKPEDFAKYQAYELIHARWAMLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTL 163
Query: 143 DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDP 202
Y GN I ++A+ A +VVL+G E YRI G ++ D L+PGG FDPLGLA DP
Sbjct: 164 SYFGNS--IPINLVVAVIA-EVVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDP 218
Query: 203 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
+ A LKVKEIKNGRLAMFSMF FF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 DQAAILKVKEIKNGRLAMFSMFAFFIQAYVTGEGPVENLAKHLSDPFGNN 268
>gi|302789319|ref|XP_002976428.1| light-harvesting complex [Selaginella moellendorffii]
gi|300156058|gb|EFJ22688.1| light-harvesting complex [Selaginella moellendorffii]
Length = 320
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/261 (47%), Positives = 153/261 (58%), Gaps = 10/261 (3%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSG 62
T+ A+++S +GK + + + S S W+G DR K+LGP
Sbjct: 54 TAVKAIANSSLGKQLQERMQETKAAAENSRSAVDAARMRARDASVWFGQDRPKWLGPIPY 113
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN-G 121
+ P +L G FPGDYG+D AGL DP F K E++H RWAML ALG V PE+L + G
Sbjct: 114 DYPDHLQGSFPGDYGFDIAGLGKDPAKFDKFFNFEILHARWAMLAALGVVIPEVLEKFFG 173
Query: 122 VKFGEAVWFKAGAQIFSEGGLDYLGNPSL--IHAQSILAIWACQVVLMGAVEGYRIAG-- 177
V F E+VW++ G LDYLG P L + AQ I+ I CQ +LM E R G
Sbjct: 174 VNFAESVWWRVGYAKLEGDTLDYLGIPGLHIVGAQGIIVIAICQFLLMVGPEYARYCGIE 233
Query: 178 --GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 232
PLG D YPGG FDPLGL+ DP F ELKVKEIKNGRLAM + GF+VQA+V
Sbjct: 234 ALEPLGIYLPGDINYPGGVLFDPLGLSKDPATFEELKVKEIKNGRLAMVAWLGFYVQALV 293
Query: 233 TGKGPLENLADHLADPVNNNA 253
T KGPLENL DHL DP++NNA
Sbjct: 294 TKKGPLENLLDHLQDPLHNNA 314
>gi|414884910|tpg|DAA60924.1| TPA: hypothetical protein ZEAMMB73_235289 [Zea mays]
Length = 315
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/260 (48%), Positives = 156/260 (60%), Gaps = 10/260 (3%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSG 62
T+ AL++S +G + + + + S+ + S WYG DR ++LGP
Sbjct: 50 TAVKALANSPLGARLRRRLEDRKAAAAAEADALRAASRGARNNSFWYGGDRPRWLGPVPY 109
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG- 121
+ P YLTGE+PGDYG+D AGL DP FA E++HCRWAML ALG V PELL G
Sbjct: 110 DYPEYLTGEYPGDYGFDIAGLGRDPVAFANYFNFEILHCRWAMLAALGVVVPELLDLFGL 169
Query: 122 VKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWACQVVLMGAVEGYRIAG-- 177
V F E VW+K G LDYLG P A Q ++ I CQ +LM E R G
Sbjct: 170 VHFVEPVWWKVGYAKLQGDNLDYLGIPGFRIAGGQGVVVIAICQALLMVGPEYARYCGIE 229
Query: 178 --GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 232
PLG D YPGG FDPLGL+ DP AF +LKVKEIKNGRLAM + FGF++QA V
Sbjct: 230 ALEPLGIYLPGDINYPGGPLFDPLGLSKDPVAFEDLKVKEIKNGRLAMVAWFGFYIQAAV 289
Query: 233 TGKGPLENLADHLADPVNNN 252
TGKGP++NL +HL+DP+NNN
Sbjct: 290 TGKGPVQNLVEHLSDPLNNN 309
>gi|356535308|ref|XP_003536189.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Glycine max]
Length = 287
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 139/209 (66%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P YLTGE PGDYG+D GLS PE FAK + E+IH RWA
Sbjct: 69 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWA 128
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + G L+Y G P I ILA+ A +
Sbjct: 129 MLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKP--IPINLILAVVA-E 185
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
+VL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF+M
Sbjct: 186 IVLVGGAEYYRIING--LDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAM 243
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GF+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 244 LGFYFQAYVTGEGPVENLAKHLSDPFGNN 272
>gi|255638437|gb|ACU19528.1| unknown [Glycine max]
Length = 287
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 139/209 (66%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P YLTGE PGDYG+D GLS PE FAK + E+IH RWA
Sbjct: 69 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWA 128
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + G L+Y G P I ILA+ A +
Sbjct: 129 MLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKP--IPINFILAVVA-E 185
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
+VL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF+M
Sbjct: 186 IVLVGGAEYYRIING--LDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAM 243
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GF+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 244 LGFYFQAYVTGEGPVENLAKHLSDPFGNN 272
>gi|356576567|ref|XP_003556402.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Glycine max]
Length = 288
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 139/209 (66%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P YLTGE PGDYG+D GLS PE FAK + E+IH RWA
Sbjct: 70 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWA 129
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + G L+Y G P I I+A+ A +
Sbjct: 130 MLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKP--IPINLIVAVVA-E 186
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
+VL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF+M
Sbjct: 187 IVLVGGAEYYRIING--LDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAM 244
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GF+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 245 LGFYFQAYVTGEGPVENLAKHLSDPFGNN 273
>gi|242070573|ref|XP_002450563.1| hypothetical protein SORBIDRAFT_05g007070 [Sorghum bicolor]
gi|241936406|gb|EES09551.1| hypothetical protein SORBIDRAFT_05g007070 [Sorghum bicolor]
Length = 282
Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 124/230 (53%), Positives = 144/230 (62%), Gaps = 17/230 (7%)
Query: 35 RKTGSKSVSSGSP--------WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGL 83
+K VSS SP WYGPDR YL E P YLTGE PGDYG+D GL
Sbjct: 43 QKPKPVPVSSSSPDISDELAKWYGPDRRIYLPDGLLDRSEVPEYLTGEVPGDYGYDPFGL 102
Query: 84 SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGL 142
PE FAK + E+IH RWAMLGA G V PE + G G EAVWFK GA + L
Sbjct: 103 GKKPEDFAKYQAYELIHARWAMLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTL 162
Query: 143 DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDP 202
+Y GN I ++A+ A +VVL+G E YRI G ++ D L+PGG FDPLGLA DP
Sbjct: 163 NYFGNS--IPINLVVAVIA-EVVLVGGAEYYRIING--LDLEDKLHPGGPFDPLGLASDP 217
Query: 203 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
+ A LKVKEIKNGRLAMFSM FF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 DQAAILKVKEIKNGRLAMFSMLAFFIQAYVTGEGPVENLAKHLSDPFGNN 267
>gi|115478412|ref|NP_001062801.1| Os09g0296800 [Oryza sativa Japonica Group]
gi|50725078|dbj|BAD33211.1| putative chlorophyll a/b-binding protein [Oryza sativa Japonica
Group]
gi|113631034|dbj|BAF24715.1| Os09g0296800 [Oryza sativa Japonica Group]
Length = 321
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 121/260 (46%), Positives = 158/260 (60%), Gaps = 10/260 (3%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSG 62
T+ AL++S +G + + + ++ ++ + S WYG +R ++LGP
Sbjct: 56 TAVKALANSPLGARLRRRLDDRKAAAAAEADALRSAARQARTASSWYGDERPRWLGPVPY 115
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG- 121
E P++LTGE+PGDYG+D AGL DP FA E++HCRWAML ALG V PELL G
Sbjct: 116 EYPAHLTGEYPGDYGFDIAGLGRDPVAFANYFNFEILHCRWAMLAALGVVVPELLDLFGV 175
Query: 122 VKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWACQVVLMGAVEGYRIAG-- 177
V F E VW+K G LDYLG P A Q ++ I CQ +LM E R G
Sbjct: 176 VHFVEPVWWKVGYAKLQGDTLDYLGIPGFRIAGGQGVIVIAICQALLMVGPEYARYCGIE 235
Query: 178 --GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 232
PLG D YPGG+ FDPLGL+ DP AF +LKVKEIKNGRLAM + GF++QA V
Sbjct: 236 ALEPLGLYLPGDINYPGGALFDPLGLSKDPVAFEDLKVKEIKNGRLAMVAWLGFYIQAAV 295
Query: 233 TGKGPLENLADHLADPVNNN 252
TGKGP++NL +HL+DP++NN
Sbjct: 296 TGKGPIQNLVEHLSDPLHNN 315
>gi|255557841|ref|XP_002519950.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223540996|gb|EEF42554.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 292
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 139/209 (66%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P YLTGE PGDYG+D GLS PE FAK + E+IH RWA
Sbjct: 74 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWA 133
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + G L+Y GN I ++A+ A +
Sbjct: 134 MLGAAGFIVPEAFNKFGANCGPEAVWFKTGALLLDGGTLNYFGNS--IPINLVVAVIA-E 190
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF+M
Sbjct: 191 VVLLGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAM 248
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GF+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 249 LGFYFQAYVTGEGPVENLAKHLSDPFGNN 277
>gi|255645788|gb|ACU23386.1| unknown [Glycine max]
Length = 289
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 139/209 (66%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P YLTGE PGDYG+D +GLS PE F+K + E+IH RWA
Sbjct: 71 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPSGLSKKPEDFSKYQAFELIHARWA 130
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + G L+Y G P I I+A+ A +
Sbjct: 131 MLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKP--IPINLIVAVIA-E 187
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
+VL+G E YRI G D L+PGG FDPLGLA+DP+ A LKVKEIKNGRLAMF+M
Sbjct: 188 IVLVGGAEYYRIINGL--NFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAM 245
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GF+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 246 LGFYFQAYVTGEGPVENLAKHLSDPFGNN 274
>gi|125563122|gb|EAZ08502.1| hypothetical protein OsI_30775 [Oryza sativa Indica Group]
Length = 321
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/260 (46%), Positives = 157/260 (60%), Gaps = 10/260 (3%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSG 62
T+ AL++S +G + + + ++ ++ + S WYG +R ++LGP
Sbjct: 56 TAVKALANSPLGARLRRRLDDRKAAAAAEADALRSAARQARTASSWYGDERPRWLGPVPY 115
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NG 121
E P++LTGE+PGDYG+D AGL DP FA E++HCRWAML ALG V PELL
Sbjct: 116 EYPAHLTGEYPGDYGFDIAGLGRDPVAFANYFNFEILHCRWAMLAALGVVVPELLDLFEV 175
Query: 122 VKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWACQVVLMGAVEGYRIAG-- 177
V F E VW+K G LDYLG P A Q ++ I CQ +LM E R G
Sbjct: 176 VHFVEPVWWKVGYAKLQGDTLDYLGIPGFRIAGGQGVIVIAICQALLMVGPEYARYCGIE 235
Query: 178 --GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 232
PLG D YPGG+ FDPLGL+ DP AF +LKVKEIKNGRLAM + GF++QA V
Sbjct: 236 ALEPLGLYLPGDINYPGGALFDPLGLSKDPVAFEDLKVKEIKNGRLAMVAWLGFYIQAAV 295
Query: 233 TGKGPLENLADHLADPVNNN 252
TGKGP++NL +HL+DP++NN
Sbjct: 296 TGKGPIQNLVEHLSDPLHNN 315
>gi|356530963|ref|XP_003534048.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Glycine max]
Length = 291
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 138/209 (66%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P YLTGE PGDYG+D GLS PE FAK + E+IH RWA
Sbjct: 73 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWA 132
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + G L+Y G P I I+A+ A +
Sbjct: 133 MLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKP--IPINLIVAVIA-E 189
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
+VL+G E YRI G D L+PGG FDPLGLA+DP+ A LKVKEIKNGRLAMF+M
Sbjct: 190 IVLVGGAEYYRIINGL--NFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAM 247
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GF+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 248 LGFYFQAYVTGEGPVENLAKHLSDPFGNN 276
>gi|356559931|ref|XP_003548249.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Glycine max]
Length = 289
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 138/209 (66%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P YLTGE PGDYG+D GLS PE F+K + E+IH RWA
Sbjct: 71 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWA 130
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + G L+Y G P I I+A+ A +
Sbjct: 131 MLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKP--IPINLIVAVIA-E 187
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
+VL+G E YRI G D L+PGG FDPLGLA+DP+ A LKVKEIKNGRLAMF+M
Sbjct: 188 IVLVGGAEYYRIINGL--NFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAM 245
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GF+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 246 LGFYFQAYVTGEGPVENLAKHLSDPFGNN 274
>gi|168053458|ref|XP_001779153.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669412|gb|EDQ55999.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 139/213 (65%), Gaps = 5/213 (2%)
Query: 36 KTGSKSVSSGSPWYGPDRVKYLGPFSG--EPPSYLTGEFPGDYGWDTAGLSADPETFAKN 93
K+ + S + + +YGP+R + GPF+ + P YL GE+PGDYG D L PE +AK
Sbjct: 1 KSVAPSQDTRTAYYGPNRPLWKGPFTSPKDVPEYLKGEYPGDYGCDIFKLVRLPENYAKL 60
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
R E+++ RWAMLG GC+ PEL+ N E VWFK GAQIFSE G+DYLG P I+A
Sbjct: 61 RSQELMNGRWAMLGITGCLVPELINSNPTPGFEPVWFKTGAQIFSEAGIDYLGVPGFINA 120
Query: 154 QSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGG-SFDPLGLADDPEAFAELKVKE 212
S++A+ Q +LMG E RI P G D YPGG +FDPLG + DPE+FAELKVKE
Sbjct: 121 HSLVAVIVVQALLMGVAEYARIKLSPEG--NDAFYPGGKAFDPLGFSSDPESFAELKVKE 178
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 245
IKNGRLAM +M G F Q VTG PL+NL D L
Sbjct: 179 IKNGRLAMMAMAGLFAQGAVTGVSPLQNLHDFL 211
>gi|116785086|gb|ABK23587.1| unknown [Picea sitchensis]
Length = 303
Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 136/209 (65%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L + P YL GE PGDYG+D GLS PE F K + E+IH RWA
Sbjct: 85 WYGPDRRIFLPEGLLDRADIPEYLNGEVPGDYGYDPFGLSKKPENFDKYQAYELIHARWA 144
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + G L Y G + IH I A+ A +
Sbjct: 145 MLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFG--ASIHINLIAAVVA-E 201
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
V+L+G E YR G + D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSM
Sbjct: 202 VILVGGAEYYRATNGL--DFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 259
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GFFVQA VTG+GP+ENLA HL+DP NN
Sbjct: 260 LGFFVQAYVTGEGPVENLAAHLSDPFGNN 288
>gi|225459918|ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic
[Vitis vinifera]
gi|147770824|emb|CAN76428.1| hypothetical protein VITISV_023565 [Vitis vinifera]
gi|297734735|emb|CBI16969.3| unnamed protein product [Vitis vinifera]
Length = 290
Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 139/209 (66%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P+YLTGE PGDYG+D GLS PE FAK + E+IH RWA
Sbjct: 72 WYGPDRRIFLPEGLLDRSEIPAYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWA 131
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + L+Y G I I A+ A +
Sbjct: 132 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLIFAVVA-E 188
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
VVL+G E YRI G ++ D L+PGG FDPLGLA+DP+ A LKVKEIKNGRLAMF+M
Sbjct: 189 VVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAM 246
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 247 LGFFIQAYVTGEGPVENLAAHLSDPFGNN 275
>gi|261351266|gb|ACX71300.1| chloroplast pigment-binding protein CP26 [Capsicum annuum]
Length = 287
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 136/209 (65%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P YL GE PGDYG+D GLS PE FAK + E+IH RWA
Sbjct: 69 WYGPDRRIFLPEGLLDKSEIPEYLNGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWA 128
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + L Y G I +LA+ A +
Sbjct: 129 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLYYFGKN--IPINLVLAVIA-E 185
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM
Sbjct: 186 VVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFSM 243
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 244 LGFFIQAYVTGQGPVENLAAHLSDPFGNN 272
>gi|1644289|emb|CAA65042.1| chlorophyll a/b-binding protein CP26 in PS II [Brassica juncea]
Length = 283
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 133/209 (63%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P YL GE GDYG+D GL PE FAK + E+IH RWA
Sbjct: 65 WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 124
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA GC+ PE L + G G EAVWFK GA + L Y G I +LA+ +
Sbjct: 125 MLGAAGCIIPEALNKYGANCGPEAVWFKTGALLLDGNTLSYFGKN--IPINLVLAV-VGE 181
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
VVL+G E YRI G + D L+PGG FDPL LA DPE A LKVKEIKNGRLAMFSM
Sbjct: 182 VVLLGGAEYYRITNGL--DFEDKLHPGGPFDPLDLAKDPEQGALLKVKEIKNGRLAMFSM 239
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
F FF+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 240 FAFFIQAYVTGEGPVENLSKHLSDPFGNN 268
>gi|222641394|gb|EEE69526.1| hypothetical protein OsJ_28989 [Oryza sativa Japonica Group]
Length = 225
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 114/140 (81%), Gaps = 7/140 (5%)
Query: 6 MALSSSFVGKAVNLAPS-GNELSNGGRISMRKTGSK---SVSSGSPWYGPDRVKYLGPFS 61
MALSS + +A APS + L RI+MRKT +K + SSGSPWYG DRV YLGP S
Sbjct: 1 MALSSPVMARA---APSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLS 57
Query: 62 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 121
GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNG
Sbjct: 58 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 117
Query: 122 VKFGEAVWFKAGAQIFSEGG 141
VKFGEAVWFKAG+Q+ G
Sbjct: 118 VKFGEAVWFKAGSQVLQGRG 137
>gi|224285421|gb|ACN40433.1| unknown [Picea sitchensis]
Length = 303
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 134/209 (64%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L + P YL GE PGDYG+D GLS PE F K + E+IH RWA
Sbjct: 85 WYGPDRRIFLPEGLLDRADIPEYLNGEVPGDYGYDPFGLSKKPENFDKYQAYELIHARWA 144
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + G L Y G I+ ++A +
Sbjct: 145 MLGAAGFIMPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPIN---LIAAVVAE 201
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
V+L+G E YR G + D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSM
Sbjct: 202 VILVGGAEYYRATNGL--DFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 259
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GFFVQA VTG+GP+ENLA HL+DP NN
Sbjct: 260 LGFFVQAYVTGEGPVENLAAHLSDPFGNN 288
>gi|116779208|gb|ABK21181.1| unknown [Picea sitchensis]
gi|116780325|gb|ABK21632.1| unknown [Picea sitchensis]
gi|116781512|gb|ABK22131.1| unknown [Picea sitchensis]
gi|116791342|gb|ABK25943.1| unknown [Picea sitchensis]
gi|116791754|gb|ABK26096.1| unknown [Picea sitchensis]
gi|148907198|gb|ABR16740.1| unknown [Picea sitchensis]
gi|224284432|gb|ACN39950.1| unknown [Picea sitchensis]
gi|224284582|gb|ACN40024.1| unknown [Picea sitchensis]
gi|224284686|gb|ACN40075.1| unknown [Picea sitchensis]
Length = 303
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 134/209 (64%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L + P YL GE PGDYG+D GLS PE F K + E+IH RWA
Sbjct: 85 WYGPDRRIFLPEGLLDRADIPEYLNGEVPGDYGYDPFGLSKKPENFDKYQAYELIHARWA 144
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + G L Y G I+ ++A +
Sbjct: 145 MLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPIN---LIAAVVAE 201
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
V+L+G E YR G + D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSM
Sbjct: 202 VILVGGAEYYRATNGL--DFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 259
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GFFVQA VTG+GP+ENLA HL+DP NN
Sbjct: 260 LGFFVQAYVTGEGPVENLAAHLSDPFGNN 288
>gi|449447521|ref|XP_004141516.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Cucumis sativus]
gi|449510691|ref|XP_004163735.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Cucumis sativus]
Length = 288
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 135/209 (64%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P YL GE PGDYG+D GLS PE F K + E+IH RWA
Sbjct: 70 WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWA 129
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + L+Y GN I I+A+ A +
Sbjct: 130 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-E 186
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
VVL+G E YRI G D L+PGG FDPLGLADDP+ A LKVKEIKNGRLAMF+M
Sbjct: 187 VVLVGGAEYYRIINGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAM 244
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GF+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 245 LGFYFQAYVTGEGPVENLAKHLSDPFGNN 273
>gi|242044232|ref|XP_002459987.1| hypothetical protein SORBIDRAFT_02g020290 [Sorghum bicolor]
gi|241923364|gb|EER96508.1| hypothetical protein SORBIDRAFT_02g020290 [Sorghum bicolor]
Length = 314
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 141/219 (64%), Gaps = 10/219 (4%)
Query: 44 SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 103
+ S WYG DR ++LGP + P +LTGE+PGDYG+D AGL DP FA E++HCRW
Sbjct: 90 NNSFWYGGDRPRWLGPVPYDYPEHLTGEYPGDYGFDIAGLGRDPIAFANYFNFEILHCRW 149
Query: 104 AMLGALGCVFPELLARNG-VKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIW 160
AML ALG V PELL G V F E VW+K G LDYLG P A Q ++ I
Sbjct: 150 AMLAALGVVIPELLDLFGLVHFVEPVWWKVGYAKLQGDTLDYLGIPGFRIAGGQGVIVIA 209
Query: 161 ACQVVLMGAVEGYRIAG----GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEI 213
CQ +LM E R G PLG D YPGG+ FDPLGL+ DP AF +LKVKEI
Sbjct: 210 ICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLGLSKDPVAFEDLKVKEI 269
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
KNGRLAM + GF++QA VTGKGP++NL +HL+DP++NN
Sbjct: 270 KNGRLAMVAWLGFYIQAAVTGKGPVQNLVEHLSDPLHNN 308
>gi|326498823|dbj|BAK02397.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508330|dbj|BAJ99432.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 310
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 138/215 (64%), Gaps = 10/215 (4%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
WYG R ++LGP + P +L GEFPGDYG+D AGL DP FA E++HCRWAML
Sbjct: 90 WYGGARPRWLGPLRYDYPEHLAGEFPGDYGFDIAGLGRDPVAFANYFNFEILHCRWAMLA 149
Query: 108 ALGCVFPELLARNG-VKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWACQV 164
ALG V PELL G V F E VW+K G LDYLG P A Q I+ I CQV
Sbjct: 150 ALGVVVPELLDLFGIVHFVEPVWWKVGYAKLQGDTLDYLGIPGFRIAGGQGIIVIAICQV 209
Query: 165 VLMGAVEGYRIAG----GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGR 217
+LM E R G PLG D YPGG+ FDPLGL+ DP AF E KVKEIKNGR
Sbjct: 210 LLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLGLSKDPVAFEEFKVKEIKNGR 269
Query: 218 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
LAM + GF++QA VTGKGP++NLA+HL+DP++NN
Sbjct: 270 LAMVAWIGFYIQAAVTGKGPVQNLAEHLSDPLHNN 304
>gi|224285677|gb|ACN40554.1| unknown [Picea sitchensis]
Length = 278
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 134/209 (64%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L + P YL GE PGDYG+D GLS PE F K + E+IH RWA
Sbjct: 60 WYGPDRRIFLPEGLLDRADIPEYLNGEVPGDYGYDPFGLSKKPENFDKYQAYELIHARWA 119
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + G L Y G I+ ++A +
Sbjct: 120 MLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPIN---LIAAVVAE 176
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
V+L+G E YR G + D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSM
Sbjct: 177 VILVGGAEYYRATNGL--DFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 234
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GFFVQA VTG+GP+ENLA HL+DP NN
Sbjct: 235 LGFFVQAYVTGEGPVENLAAHLSDPFGNN 263
>gi|224083380|ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [Populus trichocarpa]
gi|222856453|gb|EEE94000.1| light-harvesting complex II protein Lhcb7 [Populus trichocarpa]
Length = 338
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 160/263 (60%), Gaps = 10/263 (3%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSG 62
T+ A+++S +G+++ + + S K ++ S WYG +R ++LGP S
Sbjct: 71 TAVKAIANSPLGESLQRRLEERKKLAVQQSSKFKALAQKARKESFWYGEERPRWLGPISY 130
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+ P+YL+GE PGDYG+D AGL+ DP F + E++H RWAML ALG + PE+L +G
Sbjct: 131 QYPTYLSGELPGDYGFDVAGLAEDPVAFQRYFNFEILHARWAMLAALGALIPEVLDLSGA 190
Query: 123 -KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWACQVVLMGAVEGYRIAG-- 177
F E VW++ G LDYLG P L A Q +L I CQ +LM E R G
Sbjct: 191 FHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGGQGVLVIAFCQAILMVGPEYARYCGIE 250
Query: 178 --GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 232
PLG D YPGG FDPL L+ DP +F ELKVKEIKNGRLAM + GF++QA +
Sbjct: 251 ALEPLGIYLPGDINYPGGILFDPLNLSKDPVSFEELKVKEIKNGRLAMVAWLGFYIQAAL 310
Query: 233 TGKGPLENLADHLADPVNNNAWA 255
TGKGP+ENL +H++DP++NN ++
Sbjct: 311 TGKGPVENLVEHISDPLHNNLFS 333
>gi|168000216|ref|XP_001752812.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168000420|ref|XP_001752914.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695975|gb|EDQ82316.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696077|gb|EDQ82418.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 227
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 137/211 (64%), Gaps = 10/211 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR YL E P YLTGE PGDYG+D GLS PE F + + E+IH RWA
Sbjct: 6 WYGPDRRIYLPEGLLAKDEIPEYLTGEVPGDYGYDPFGLSKKPEDFDRYQAYELIHARWA 65
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLG-NPSLIHAQSILAIWAC 162
MLGA G V PE + G G EAVW+K GA + + Y G L A +++A
Sbjct: 66 MLGAAGFVLPEAFNKFGAVCGPEAVWWKTGALLLEGDSIKYFGATVPLNLAAAVIA---- 121
Query: 163 QVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 221
+V+L+G E YR PLG D L+PGG+FDPLGLA DP+ FA LKVKEIKNGRLAMF
Sbjct: 122 EVILVGGAEYYRSTNKSPLGSDLDRLHPGGAFDPLGLAKDPDQFALLKVKEIKNGRLAMF 181
Query: 222 SMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
SM GFFVQA VTG+GP+ENL+ HL+DP NN
Sbjct: 182 SMLGFFVQAYVTGEGPVENLSAHLSDPFGNN 212
>gi|358248178|ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycine max]
gi|255636882|gb|ACU18774.1| unknown [Glycine max]
Length = 331
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/259 (47%), Positives = 153/259 (59%), Gaps = 23/259 (8%)
Query: 15 KAVNLAPSGNELSNGGRISMRKTGSKSVSSG-----------SPWYGPDRVKYLGPFSGE 63
KA+ +P G L ++ RKT + SS S WYG DR ++LGP S E
Sbjct: 63 KAIANSPLGESLQR--KMEERKTFAVENSSTFKALAGKARKESFWYGEDRPRWLGPISYE 120
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV- 122
PSYLTGE PGDYG+D AGL DP K E++H RWAML ++G + PE+L G
Sbjct: 121 YPSYLTGELPGDYGFDIAGLGQDPVALQKYFNFEILHARWAMLASVGALIPEILDLLGAF 180
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWACQVVLMGAVEGYRIAG--- 177
F E VW++ G LDYLG L A Q ++ I CQ +LM E R G
Sbjct: 181 HFVEPVWWRVGYSKLKGDTLDYLGIQGLHFAGSQGVVVIAICQALLMVGPEYARYCGIEA 240
Query: 178 -GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 233
PLG D YPGG+ FDPL L++DPEAF ELKVKEIKNGRLAM + GF+VQA +T
Sbjct: 241 LEPLGIYLPGDINYPGGALFDPLNLSNDPEAFEELKVKEIKNGRLAMVAWLGFYVQAALT 300
Query: 234 GKGPLENLADHLADPVNNN 252
GKGP++NL DH++DP +NN
Sbjct: 301 GKGPVQNLIDHISDPFHNN 319
>gi|116783956|gb|ABK23158.1| unknown [Picea sitchensis]
Length = 303
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 133/209 (63%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L + P YL GE PGDYG+D GL PE F K + E+IH RWA
Sbjct: 85 WYGPDRRIFLPEGLLDRADIPEYLNGEVPGDYGYDPFGLIKKPENFDKYQAYELIHARWA 144
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + G L Y G I+ ++A +
Sbjct: 145 MLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPIN---LIAAVVAE 201
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
V+L+G E YR G + D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSM
Sbjct: 202 VILVGGAEYYRATNGL--DFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 259
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GFFVQA VTG+GP+ENLA HL+DP NN
Sbjct: 260 LGFFVQAYVTGEGPVENLAAHLSDPFGNN 288
>gi|914284|gb|AAB34068.1| light-harvesting complex b type 3, Lhcb3 [Ginkgo biloba, 3-4 week
old seedlings, Peptide Partial, 132 aa]
Length = 132
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/132 (79%), Positives = 114/132 (86%), Gaps = 3/132 (2%)
Query: 134 AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP-LGEVTDPLYPGGS 192
AQIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG VEG+RI G P +GE D LYPGG
Sbjct: 1 AQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLPGVGEGGD-LYPGGQ 59
Query: 193 -FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 251
FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV N
Sbjct: 60 YFDPLGLADDPDTFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN 119
Query: 252 NAWAYATNFVPG 263
NAW YAT FVPG
Sbjct: 120 NAWEYATKFVPG 131
>gi|168049357|ref|XP_001777130.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671573|gb|EDQ58123.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 118/232 (50%), Positives = 141/232 (60%), Gaps = 10/232 (4%)
Query: 36 KTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 95
+ +V S WY R K+LGP + P +L GE PGDYG+D GLS DP F +
Sbjct: 114 REAQSNVRDESMWYREGRPKWLGPIPYDYPDHLQGEAPGDYGFDILGLSRDPTAFERYFN 173
Query: 96 LEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL--IH 152
E++H RWAML ALG V PELL R GV+F E VW+K G LDYLG P L
Sbjct: 174 FEILHARWAMLAALGVVIPELLDRFGGVQFSEPVWWKVGYAKLQGDTLDYLGIPGLHIAG 233
Query: 153 AQSILAIWACQVVLMGAVEGYRIAG----GPLGEVT--DPLYPGGS-FDPLGLADDPEAF 205
AQ IL I CQV+LM E R G PLG D YPGG+ FDPLGL D AF
Sbjct: 234 AQGILVIAFCQVILMLGPEYARYCGIEALEPLGIFLPGDVNYPGGALFDPLGLTKDAAAF 293
Query: 206 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYA 257
+LKVKE+KNGRLAM + GF+VQA+VT KGP++NL D L DP++ N +AYA
Sbjct: 294 EDLKVKEMKNGRLAMVAWLGFYVQALVTQKGPIDNLFDFLEDPLHQNLFAYA 345
>gi|297839529|ref|XP_002887646.1| chlorophyll A-B binding family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333487|gb|EFH63905.1| chlorophyll A-B binding family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 330
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/263 (44%), Positives = 155/263 (58%), Gaps = 10/263 (3%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSG 62
T+ A+++S +G+++ + S K ++ + S WYG +R ++ GP
Sbjct: 64 TAVKAIANSSLGESLRRRLEEKKKEAVENSSRFKAKAQEARNDSKWYGKERPRWFGPIPY 123
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+ P YLTGE PGDYG+D AGL D TF K E++H RWAML ALG + PE+L G
Sbjct: 124 DYPPYLTGELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWAMLAALGALIPEVLDLTGA 183
Query: 123 -KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWACQVVLMGAVEGYRIAG-- 177
F E VW++ G LDYLG P L A Q ++ I CQV+LM E R G
Sbjct: 184 FHFAEPVWWRVGYSKLQGETLDYLGIPGLHVAGSQGVIVIAICQVLLMVGPEYARYCGIE 243
Query: 178 --GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 232
PLG D YPGG+ FDPL L++DP AF +LKVKEIKNGRLAM + GF+ QA
Sbjct: 244 ALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGFYAQAAF 303
Query: 233 TGKGPLENLADHLADPVNNNAWA 255
TGKGP++NL DH++DP++NN A
Sbjct: 304 TGKGPVQNLVDHVSDPLHNNLLA 326
>gi|224127848|ref|XP_002329192.1| light-harvesting complex II protein Lhcb5 [Populus trichocarpa]
gi|118487642|gb|ABK95646.1| unknown [Populus trichocarpa]
gi|222870973|gb|EEF08104.1| light-harvesting complex II protein Lhcb5 [Populus trichocarpa]
Length = 290
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 136/209 (65%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F K + E+IH RWA
Sbjct: 72 WYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFEKYQAFELIHARWA 131
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + L+Y G I +LA+ A +
Sbjct: 132 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-E 188
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
V+L+G E +RI G LG D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF+M
Sbjct: 189 VILVGGAEYFRITNG-LG-FDDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAM 246
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GFF QA VTG+GP+ENLA HL+DP NN
Sbjct: 247 LGFFFQAYVTGEGPVENLAKHLSDPFGNN 275
>gi|168007695|ref|XP_001756543.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692139|gb|EDQ78497.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 225
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/213 (50%), Positives = 136/213 (63%), Gaps = 5/213 (2%)
Query: 36 KTGSKSVSSGSPWYGPDRVKYLGPFSG--EPPSYLTGEFPGDYGWDTAGLSADPETFAKN 93
K+ + + +P+YGP+R + GPF+ + P YL GE+PGDYG D L+ P +A+
Sbjct: 13 KSVAPDQDARAPYYGPNRPLWKGPFTKPKDVPEYLKGEYPGDYGCDIFKLARLPANYARL 72
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
R E+++ RWAMLG GC+ PEL+ N E VWF GAQIFS+ G+DYLG P I+A
Sbjct: 73 RTQELMNGRWAMLGITGCLTPELINSNSTPGFEPVWFNTGAQIFSDAGIDYLGVPGFINA 132
Query: 154 QSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGG-SFDPLGLADDPEAFAELKVKE 212
S+ A+ Q +LMG E RI P G DP YPGG +FDPLG + DPE AELKVKE
Sbjct: 133 HSLFAVIVVQALLMGLAEYARIKFVPEG--ADPFYPGGKTFDPLGFSSDPEILAELKVKE 190
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 245
IKNGRLAM +M G F Q VTG PL+NL D L
Sbjct: 191 IKNGRLAMMAMAGLFAQGAVTGVSPLQNLHDWL 223
>gi|339716054|gb|AEJ88274.1| putative chlorophyll a/b binding protein [Wolffia australiana]
Length = 279
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 136/209 (65%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P+YL GE PGDYG+D GL PE FAK + E+IH RWA
Sbjct: 61 WYGPDRRIFLPDGLLDRSEVPAYLNGEVPGDYGYDPFGLGKKPEDFAKYQAYELIHARWA 120
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + L+Y G I ++A+ A +
Sbjct: 121 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVVAVIA-E 177
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LK KEIKNGRLAMF+M
Sbjct: 178 VVLLGGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAAILKAKEIKNGRLAMFAM 235
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GFF+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 236 LGFFLQAYVTGEGPVENLSKHLSDPFGNN 264
>gi|168068372|ref|XP_001786046.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662227|gb|EDQ49143.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 270
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 141/224 (62%), Gaps = 11/224 (4%)
Query: 36 KTGSKSVSSGSPWYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
K S + WYGPDR YL E P+YLTGE PGDYG+D GLS PE F +
Sbjct: 36 KVNVPSNEELAKWYGPDRRIYLPEGLLAKDEIPAYLTGEVPGDYGYDPFGLSKKPEDFDR 95
Query: 93 NRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLI 151
+ E+IH RWAMLGA G V PE + G G EAVW+K GA + + Y G I
Sbjct: 96 YQAYELIHARWAMLGAAGFVLPEAFNKFGAVCGPEAVWWKTGALLLEGDSIKYFGATVPI 155
Query: 152 H-AQSILAIWACQVVLMGAVEGYRIAGGPLG--EVTDPLYPGGSFDPLGLADDPEAFAEL 208
+ A +++A +V+L+G E YR + + D L+PGG+FDPLGLA DP+ FA L
Sbjct: 156 NLAAAVIA----EVILVGGAEYYRSTNKDVYGLQDLDRLHPGGAFDPLGLAKDPDQFALL 211
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
KVKEIKNGRLAMFSM GFFVQA VTG+GP+ENLA HL+DP NN
Sbjct: 212 KVKEIKNGRLAMFSMLGFFVQAYVTGEGPVENLAAHLSDPFGNN 255
>gi|413933709|gb|AFW68260.1| hypothetical protein ZEAMMB73_510715 [Zea mays]
Length = 144
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/145 (68%), Positives = 115/145 (79%), Gaps = 4/145 (2%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
MATS + ++SF+G+A+ P+G + G RI+MR+T + S WY PDR KYL PF
Sbjct: 1 MATSALQQTTSFLGQALVSRPAG--VDAGSRITMRRTVKSAPQS--IWYDPDRPKYLAPF 56
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
S + SYLTGEFPGDYGWDTAGLSAD ETFA+NRELEVIH WAMLGALGCVFPE+LA+N
Sbjct: 57 SEQTSSYLTGEFPGDYGWDTAGLSADHETFARNRELEVIHSWWAMLGALGCVFPEVLAKN 116
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYL 145
VKFGE VWFKAGAQIFSEGGLDYL
Sbjct: 117 DVKFGEVVWFKAGAQIFSEGGLDYL 141
>gi|449525738|ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 338
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/260 (45%), Positives = 152/260 (58%), Gaps = 10/260 (3%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSG 62
T+ A+++S +G ++ + S S K ++ S WYG +R ++LGP
Sbjct: 68 TAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDSSWYGEERPRWLGPLPY 127
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+ P YLTGE PGDYG+D AGLS DP F K E++H RWAML +LG + PE+L G
Sbjct: 128 DYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGA 187
Query: 123 -KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWACQVVLMGAVEGYRIAG-- 177
F E +W++ G LDYLG P L A Q ++ I CQ +LM E R G
Sbjct: 188 FHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIE 247
Query: 178 --GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 232
PLG D YPGG FDPL L+ D EAF ELKVKEIKNGRLAM + GF+ QA +
Sbjct: 248 ALEPLGIYLPGDINYPGGVLFDPLNLSKDAEAFEELKVKEIKNGRLAMVAWLGFYSQAAL 307
Query: 233 TGKGPLENLADHLADPVNNN 252
TGKGP++NL +H+ADP +NN
Sbjct: 308 TGKGPVQNLLNHIADPFHNN 327
>gi|125533937|gb|EAY80485.1| hypothetical protein OsI_35663 [Oryza sativa Indica Group]
Length = 283
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/223 (52%), Positives = 142/223 (63%), Gaps = 17/223 (7%)
Query: 42 VSSGSP--------WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETF 90
V+S SP WYGPDR +L E P YL GE PGDYG+D GLS PE F
Sbjct: 51 VTSSSPDIGDELAKWYGPDRRIFLPEGLLDRSEVPEYLNGEVPGDYGYDPFGLSKKPEDF 110
Query: 91 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPS 149
+K + E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y GN
Sbjct: 111 SKYQAYELIHARWAMLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSI 170
Query: 150 LIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELK 209
I+ ++ A +VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LK
Sbjct: 171 PIN---LIVAVAAEVVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAALLK 225
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
VKEIKNGRLAMFSM GFF+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 226 VKEIKNGRLAMFSMLGFFIQAYVTGEGPVENLSKHLSDPFGNN 268
>gi|15223108|ref|NP_177783.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|12323973|gb|AAG51944.1|AC015450_5 putative chlorophyll A-B binding protein; 65434-67056 [Arabidopsis
thaliana]
gi|332197739|gb|AEE35860.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 327
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 114/260 (43%), Positives = 153/260 (58%), Gaps = 10/260 (3%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSG 62
T+ A+++S +G ++ + S K+ ++ + S WYG +R ++ GP
Sbjct: 61 TAVKAIANSSIGVSLRRRLEEKKKEAVENSSRFKSKAQEARNDSKWYGKERPRWFGPIPY 120
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+ P YLTGE PGDYG+D AGL D TF K E++H RWAML ALG + PE+ G
Sbjct: 121 DYPPYLTGELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWAMLAALGALIPEVFDLTGT 180
Query: 123 -KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWACQVVLMGAVEGYRIAG-- 177
F E VW++ G L+YLG P L A Q ++ I CQV+LM E R G
Sbjct: 181 FHFAEPVWWRVGYSKLQGETLEYLGIPGLHVAGSQGVIVIAICQVLLMVGPEYARYCGIE 240
Query: 178 --GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 232
PLG D YPGG+ FDPL L++DP AF +LKVKEIKNGRLAM + GF+ QA
Sbjct: 241 ALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGFYAQAAF 300
Query: 233 TGKGPLENLADHLADPVNNN 252
TGKGP++NL DH++DP++NN
Sbjct: 301 TGKGPVQNLVDHVSDPLHNN 320
>gi|449455655|ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 338
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/260 (45%), Positives = 151/260 (58%), Gaps = 10/260 (3%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSG 62
T+ A+++S +G ++ + S S K ++ S WYG +R ++LGP
Sbjct: 68 TAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDSSWYGEERPRWLGPLPY 127
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+ P YLTGE PGDYG+D AGLS DP F K E++H RWAML +LG + PE+L G
Sbjct: 128 DYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGA 187
Query: 123 -KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWACQVVLMGAVEGYRIAG-- 177
F E +W++ G LDYLG P L A Q ++ I CQ +LM E R G
Sbjct: 188 FHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIE 247
Query: 178 --GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 232
PLG D YPGG FDPL L+ D AF ELKVKEIKNGRLAM + GF+ QA +
Sbjct: 248 ALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAAL 307
Query: 233 TGKGPLENLADHLADPVNNN 252
TGKGP++NL DH+ADP +NN
Sbjct: 308 TGKGPVQNLLDHIADPFHNN 327
>gi|115484899|ref|NP_001067593.1| Os11g0242800 [Oryza sativa Japonica Group]
gi|62733869|gb|AAX95978.1| chlorophyll a/b-binding protein CP26 precursor - maize [Oryza
sativa Japonica Group]
gi|108864184|gb|ABA92338.2| Chlorophyll A-B binding protein, expressed [Oryza sativa Japonica
Group]
gi|113644815|dbj|BAF27956.1| Os11g0242800 [Oryza sativa Japonica Group]
gi|125576735|gb|EAZ17957.1| hypothetical protein OsJ_33501 [Oryza sativa Japonica Group]
gi|215692422|dbj|BAG87842.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704351|dbj|BAG93785.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 283
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/223 (52%), Positives = 142/223 (63%), Gaps = 17/223 (7%)
Query: 42 VSSGSP--------WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETF 90
V+S SP WYGPDR +L E P YL GE PGDYG+D GLS PE F
Sbjct: 51 VTSSSPDIGDELAKWYGPDRRIFLPEGLLDRSEVPDYLNGEVPGDYGYDPFGLSKKPEDF 110
Query: 91 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPS 149
+K + E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y GN
Sbjct: 111 SKYQAYELIHARWAMLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSI 170
Query: 150 LIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELK 209
I+ ++ A +VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LK
Sbjct: 171 PIN---LIVAVAAEVVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAALLK 225
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
VKEIKNGRLAMFSM GFF+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 226 VKEIKNGRLAMFSMLGFFIQAYVTGEGPVENLSKHLSDPFGNN 268
>gi|18958|emb|CAA44777.1| Precursor of CP29, core chlorophyll a/b binding (CAB) protein of
photosystem II (PSII) [Hordeum vulgare subsp. vulgare]
gi|326511355|dbj|BAJ87691.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|445122|prf||1908428A chlorophyll a/b-binding protein
Length = 286
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 134/209 (64%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYL--GPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR YL G E P YL GE PGDYG+D GL PE FAK + E+IH RWA
Sbjct: 68 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 127
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE L + G G EAVWFK GA + L+Y GN I+ ++ +
Sbjct: 128 MLGAAGFIIPEALNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LILAVVAE 184
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
VVL+G E YRI G E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM
Sbjct: 185 VVLVGGAEYYRITNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSM 242
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GFF+QA VTG+GP ENL HL+DP NN
Sbjct: 243 LGFFIQAYVTGEGPFENLCAHLSDPFGNN 271
>gi|159475641|ref|XP_001695927.1| minor chlorophyll a-b binding protein of photosystem II
[Chlamydomonas reinhardtii]
gi|12060444|dbj|BAB20613.1| CP26 [Chlamydomonas reinhardtii]
gi|158275487|gb|EDP01264.1| minor chlorophyll a-b binding protein of photosystem II
[Chlamydomonas reinhardtii]
Length = 289
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 115/224 (51%), Positives = 135/224 (60%), Gaps = 19/224 (8%)
Query: 48 WYGPDRVKYL--GPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L G + E P YL GE GDYG+D GL DPET AK RE E++H RWA
Sbjct: 52 WYGPDRKLFLPSGLYDRSEIPEYLNGELAGDYGYDPLGLGKDPETVAKYRENELLHARWA 111
Query: 105 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI--LAIWAC 162
ML A G + PE L NG WF+ GA++ + G L+Y P I + + A+ A
Sbjct: 112 MLAAAGILIPEGLQANGANIKGGTWFETGAEMLNGGTLNYFAVPWGIVSNPLPLFAVIAV 171
Query: 163 QVVLMGAVEGYRIAG-GPLG-------------EVTDPLYPGGSFDPLGLADDPEAFAEL 208
+V LMGAVE YR G GP G + DPLYPGG FDPLGLADDPE EL
Sbjct: 172 EVGLMGAVEFYRRNGTGPAGYSPGIGKFDSSVFDGLDPLYPGGPFDPLGLADDPEVLQEL 231
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
KVKEIKNGRLAM S+ GF VQ+ VTG+GP N H+ADP N
Sbjct: 232 KVKEIKNGRLAMVSVLGFAVQSYVTGEGPYANWTKHVADPFGYN 275
>gi|160713963|gb|ABX47017.1| chloroplast chlorophyll a/b binding protein cab-PhE9 [Phyllostachys
edulis]
Length = 283
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 136/209 (65%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P YL GE PGDYG+D GLS +P+ FA+ + E+IH RWA
Sbjct: 65 WYGPDRRIFLPEGLLDRSEVPEYLNGEVPGDYGYDPFGLSKNPDNFARYQAYELIHARWA 124
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + L+Y GN I+ + +
Sbjct: 125 MLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLEGNTLNYFGNSIPINLAVAVV---AE 181
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM
Sbjct: 182 VVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSM 239
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 240 LGFFIQAYVTGEGPVENLAKHLSDPFGNN 268
>gi|302856917|ref|XP_002959743.1| hypothetical protein VOLCADRAFT_85008 [Volvox carteri f.
nagariensis]
gi|300254465|gb|EFJ39192.1| hypothetical protein VOLCADRAFT_85008 [Volvox carteri f.
nagariensis]
Length = 179
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 107/123 (86%), Gaps = 1/123 (0%)
Query: 43 SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 101
SSG WYGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH
Sbjct: 32 SSGIEWYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHA 91
Query: 102 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 161
RWAMLGALGCV P+LL++NGV+F EA+WFKAGAQIF EGGLDYLGN SL+HAQ+I+A A
Sbjct: 92 RWAMLGALGCVTPKLLSKNGVQFSEALWFKAGAQIFQEGGLDYLGNLSLVHAQNIVATLA 151
Query: 162 CQV 164
CQV
Sbjct: 152 CQV 154
>gi|53793542|dbj|BAD52991.1| a/b-binding protein precursor-like [Oryza sativa Japonica Group]
Length = 98
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/98 (98%), Positives = 97/98 (98%)
Query: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 1 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
Query: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
>gi|357157898|ref|XP_003577951.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
[Brachypodium distachyon]
Length = 318
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 136/215 (63%), Gaps = 10/215 (4%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
W+G R ++LGP + P +L GEFPGDYG+D AGL DP FA E++HCRWAML
Sbjct: 98 WFGEARPRWLGPIPYDYPEHLAGEFPGDYGFDIAGLGRDPVAFANYFNFEILHCRWAMLA 157
Query: 108 ALGCVFPELLARNG-VKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWACQV 164
ALG V PELL G V F E VW+K G LDYLG L A Q ++ I CQ
Sbjct: 158 ALGVVIPELLDLFGIVHFVEPVWWKVGYAKLQGDTLDYLGITGLRIAGGQGVIVIAICQA 217
Query: 165 VLMGAVEGYRIAG----GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGR 217
+LM E R G PLG D YPGG+ FDPLGL+ DP F ELKVKEIKNGR
Sbjct: 218 LLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLGLSKDPVGFEELKVKEIKNGR 277
Query: 218 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
LAM + GF++QA VTGKGP++NL +HL+DP++NN
Sbjct: 278 LAMVAWLGFYLQAAVTGKGPVQNLVEHLSDPLHNN 312
>gi|169261108|gb|ACA52202.1| chloroplast chlorophyll A/B-binding protein [Oenothera grandiflora]
Length = 118
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/121 (82%), Positives = 105/121 (86%), Gaps = 6/121 (4%)
Query: 11 SFVGKAVNLAPSGNELSNGGRISMRKTGSKS---VSSGSPWYGPDRVKYLGPFSGEPPSY 67
+F GKAV L+P E+ G I+MRKT K+ VSSGSPWYGPDRVKYLGPFSGE PSY
Sbjct: 1 AFAGKAVKLSP---EVLTTGGITMRKTAGKAKPAVSSGSPWYGPDRVKYLGPFSGEAPSY 57
Query: 68 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 127
LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA
Sbjct: 58 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 117
Query: 128 V 128
V
Sbjct: 118 V 118
>gi|87313239|gb|ABD37916.1| light-harvesting chlorophyll-a/b binding protein Lhcb5
[Chlamydomonas incerta]
Length = 259
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/224 (51%), Positives = 135/224 (60%), Gaps = 19/224 (8%)
Query: 48 WYGPDRVKYL--GPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L G + E P YL GE GDYG+D GL DPET AK RE E++H RWA
Sbjct: 22 WYGPDRKLFLPSGLYDRSEIPDYLNGELAGDYGYDPLGLGKDPETVAKYRENELLHARWA 81
Query: 105 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI--LAIWAC 162
ML A G + PE L NG WF+ GA++ + G L+Y P I + + A+ A
Sbjct: 82 MLAAAGILIPEGLQANGANIKGGTWFETGAEMLNGGTLNYFAVPWGIVSNPLPLFAVIAV 141
Query: 163 QVVLMGAVEGYRIAG-GPLG-------------EVTDPLYPGGSFDPLGLADDPEAFAEL 208
+V LMGAVE YR G GP G + DPLYPGG FDPLGLADDPE EL
Sbjct: 142 EVGLMGAVEFYRRNGSGPAGYSPGIGKFDSSVFDGLDPLYPGGPFDPLGLADDPEVLQEL 201
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
KVKEIKNGRLAM S+ GF VQ+ VTG+GP N H+ADP N
Sbjct: 202 KVKEIKNGRLAMVSVLGFAVQSYVTGEGPYANWTKHVADPFGYN 245
>gi|428230868|gb|AFY99056.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
Length = 107
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/101 (90%), Positives = 98/101 (97%)
Query: 74 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 133
GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG
Sbjct: 7 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG 66
Query: 134 AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
+QIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR
Sbjct: 67 SQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGLIEGYR 107
>gi|110377793|gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotiana tabacum]
Length = 285
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 134/209 (64%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P YL GE PGDYG+D GLS PE FAK + E+IH RWA
Sbjct: 67 WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWA 126
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G V PE + G G EAVWFK GA + L+Y G I+ + +
Sbjct: 127 MLGAAGFVIPEAFNKFGADCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVVAVV---AE 183
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF+M
Sbjct: 184 VVLLGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAM 241
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GFF+QA VTGKGP+ENLA HL+DP NN
Sbjct: 242 LGFFIQAYVTGKGPVENLAAHLSDPFGNN 270
>gi|167997433|ref|XP_001751423.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697404|gb|EDQ83740.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 244
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/101 (92%), Positives = 96/101 (95%)
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
VVLMGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSM
Sbjct: 144 VVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSM 203
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
FGFFVQAIVTGKGPLENL DHLADPV NNAWAYATNF PG
Sbjct: 204 FGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPGN 244
>gi|302835678|ref|XP_002949400.1| hypothetical protein VOLCADRAFT_104309 [Volvox carteri f.
nagariensis]
gi|300265227|gb|EFJ49419.1| hypothetical protein VOLCADRAFT_104309 [Volvox carteri f.
nagariensis]
Length = 286
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 135/224 (60%), Gaps = 19/224 (8%)
Query: 48 WYGPDRVKYL--GPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDRV +L G + E P+YL GE GDYG+D GL D ET AK RE E++H RWA
Sbjct: 49 WYGPDRVLFLPSGLYDRSEVPAYLNGELAGDYGYDPLGLGKDTETVAKYREYELLHARWA 108
Query: 105 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI--LAIWAC 162
ML A G + PE L NG VWF+ GA++ + G L+Y P I + + A+ A
Sbjct: 109 MLAAAGILIPEGLQANGANIKGGVWFETGAEMLNGGTLNYFAVPWGIVSNPLPLFAVIAI 168
Query: 163 QVVLMGAVEGYRIAG-GPLG-------------EVTDPLYPGGSFDPLGLADDPEAFAEL 208
+V LMGAVE YR G GP G E D +YPGG FDPLGLADDPE F EL
Sbjct: 169 EVGLMGAVEFYRRNGTGPAGYSPGIGKFDSSVFEGLDSIYPGGPFDPLGLADDPEVFQEL 228
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
KVKEIKNGRLAM S+ F +Q+ VTG+GP N H+ DP N
Sbjct: 229 KVKEIKNGRLAMVSVLAFAIQSYVTGEGPYTNWIKHVQDPFGYN 272
>gi|302796621|ref|XP_002980072.1| light-harvesting complex [Selaginella moellendorffii]
gi|302811558|ref|XP_002987468.1| light-harvesting complex [Selaginella moellendorffii]
gi|300144874|gb|EFJ11555.1| light-harvesting complex [Selaginella moellendorffii]
gi|300152299|gb|EFJ18942.1| light-harvesting complex [Selaginella moellendorffii]
Length = 271
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 134/209 (64%), Gaps = 10/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYG R YL + P YLTGE PGDYG+D GLS P F K + E+IH RWA
Sbjct: 58 WYGESRRIYLPEGILDRSDVPEYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARWA 117
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G V PE + G + G EAVWFK GA + G L+Y G + I +LA+ A +
Sbjct: 118 MLGAAGFVIPEAFNKFGAQCGPEAVWFKTGALLLDGGTLNYFG--ANIPINLVLAVLA-E 174
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
V+L+G E YR LG D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M
Sbjct: 175 VILVGGAEYYRSINN-LG--LDRLHPGGPFDPLGLAKDPDNFALLKVKEIKNGRLAMFAM 231
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GFF+QA TG+GP+ENL HL+DP NN
Sbjct: 232 LGFFIQAYATGEGPVENLTTHLSDPFGNN 260
>gi|357157014|ref|XP_003577654.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Brachypodium distachyon]
Length = 286
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 135/209 (64%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P YL GE PGDYG+D GLS P+ F K + E+IH RWA
Sbjct: 68 WYGPDRRIFLPDGLLDRSEVPEYLNGEVPGDYGYDPFGLSKKPDDFTKYQAYELIHARWA 127
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + L+Y GN I+ ++ +
Sbjct: 128 MLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LILAVVAE 184
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM
Sbjct: 185 VVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSM 242
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GFF+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 243 LGFFIQAYVTGEGPVENLSAHLSDPFGNN 271
>gi|297809249|ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arabidopsis lyrata subsp.
lyrata]
gi|297318345|gb|EFH48767.1| hypothetical protein ARALYDRAFT_489877 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 136/218 (62%), Gaps = 9/218 (4%)
Query: 39 SKSVSSGSPWYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 95
S++ + WYGPDR +L E P YL GE GDYG+D GL PE FAK +
Sbjct: 53 SETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQA 112
Query: 96 LEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
E+IH RWAMLGA G + PE L + G G EAVWFK GA + L+Y G I+
Sbjct: 113 FELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV 172
Query: 155 SILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 214
+ +VVL+G E YRI G + D L+PGG FDPLGLA DPE A LKVKEIK
Sbjct: 173 LAVV---AEVVLLGGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIK 227
Query: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 228 NGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
>gi|15235029|ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidopsis thaliana]
gi|28558077|sp|Q9XF89.1|CB5_ARATH RecName: Full=Chlorophyll a-b binding protein CP26, chloroplastic;
AltName: Full=LHCB5; AltName: Full=LHCIIc; AltName:
Full=Light-harvesting complex II protein 5; Flags:
Precursor
gi|4741958|gb|AAD28776.1|AF134129_1 Lhcb5 protein [Arabidopsis thaliana]
gi|11908106|gb|AAG41482.1|AF326900_1 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|12642916|gb|AAK00400.1|AF339718_1 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|14190463|gb|AAK55712.1|AF380631_1 AT4g10340/F24G24_140 [Arabidopsis thaliana]
gi|15983446|gb|AAL11591.1|AF424597_1 AT4g10340/F24G24_140 [Arabidopsis thaliana]
gi|4538963|emb|CAB39787.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
gi|7267731|emb|CAB78157.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
gi|15809718|gb|AAL06787.1| AT4g10340/F24G24_140 [Arabidopsis thaliana]
gi|332657469|gb|AEE82869.1| chlorophyll a-b binding protein CP26 [Arabidopsis thaliana]
Length = 280
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 136/218 (62%), Gaps = 9/218 (4%)
Query: 39 SKSVSSGSPWYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 95
S++ + WYGPDR +L E P YL GE GDYG+D GL PE FAK +
Sbjct: 53 SETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQA 112
Query: 96 LEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
E+IH RWAMLGA G + PE L + G G EAVWFK GA + L+Y G I+
Sbjct: 113 FELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV 172
Query: 155 SILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 214
+ +VVL+G E YRI G + D L+PGG FDPLGLA DPE A LKVKEIK
Sbjct: 173 LAVV---AEVVLLGGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIK 227
Query: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 228 NGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
>gi|19184|emb|CAA43590.1| Type I (26 kD) CP29 polypeptide [Solanum lycopersicum]
Length = 286
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 135/209 (64%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P YL GE PG+YG+D GLS PE FAK + E+IH RWA
Sbjct: 68 WYGPDRRIFLPEGLLDRSEIPEYLNGEVPGEYGYDPFGLSKKPEDFAKYQAYELIHARWA 127
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + L+Y G I+ ++ +
Sbjct: 128 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN---LILAVVAE 184
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM
Sbjct: 185 VVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFSM 242
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 243 LGFFIQAYVTGQGPVENLAAHLSDPFGNN 271
>gi|21593520|gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
Length = 280
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 136/218 (62%), Gaps = 9/218 (4%)
Query: 39 SKSVSSGSPWYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 95
S++ + WYGPDR +L E P YL GE GDYG+D GL PE FAK +
Sbjct: 53 SETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQA 112
Query: 96 LEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
E+IH RWAMLGA G + PE L + G G EAVWFK GA + L+Y G I+
Sbjct: 113 FELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV 172
Query: 155 SILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 214
+ +VVL+G E YRI G + D L+PGG FDPLGLA DPE A LKVKEIK
Sbjct: 173 LAVV---AEVVLLGGSEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIK 227
Query: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 228 NGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
>gi|125605083|gb|EAZ44119.1| hypothetical protein OsJ_28744 [Oryza sativa Japonica Group]
Length = 245
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/205 (53%), Positives = 132/205 (64%), Gaps = 10/205 (4%)
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP E P++LTGE+PGDYG+D AGL DP FA E++HCRWAML ALG V PELL
Sbjct: 35 GPVPYEYPAHLTGEYPGDYGFDIAGLGRDPVAFANYFNFEILHCRWAMLAALGVVVPELL 94
Query: 118 ARNGV-KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWACQVVLMGAVEGYR 174
GV F E VW+K G LDYLG P A Q ++ I CQ +LM E R
Sbjct: 95 DLFGVVHFVEPVWWKVGYAKLQGDTLDYLGIPGFRIAGGQGVIVIAICQALLMVGPEYAR 154
Query: 175 IAG----GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 227
G PLG D YPGG+ FDPLGL+ DP AF +LKVKEIKNGRLAM + GF+
Sbjct: 155 YCGIEALEPLGLYLPGDINYPGGALFDPLGLSKDPVAFEDLKVKEIKNGRLAMVAWLGFY 214
Query: 228 VQAIVTGKGPLENLADHLADPVNNN 252
+QA VTGKGP++NL +HL+DP++NN
Sbjct: 215 IQAAVTGKGPIQNLVEHLSDPLHNN 239
>gi|159147189|gb|ABW90989.1| LHCB5 [Phyllostachys edulis]
Length = 283
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/211 (53%), Positives = 135/211 (63%), Gaps = 13/211 (6%)
Query: 48 WYGPDRVKYLGPFSG-----EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 102
WYGPDR +L G E P YL GE PGDYG+D GLS +P+ FA+ + E+IH R
Sbjct: 65 WYGPDRRIFL--LEGLLDRSEVPEYLNGEVPGDYGYDPFGLSKNPDNFARYQAYELIHAR 122
Query: 103 WAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 161
WAMLGA G + PE + G G EAVWFK GA + L+Y GN I+ +
Sbjct: 123 WAMLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLEGNTLNYFGNSIPINLAVAVV--- 179
Query: 162 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 221
+VVL+G E YRI G ++ L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF
Sbjct: 180 AEVVLVGGAEYYRIINGL--DLEGKLHPGGPFDPLGLASDPDQAAPLKVKEIKNGRLAMF 237
Query: 222 SMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 238 PMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 268
>gi|305377034|dbj|BAJ15880.1| chlorophyll a/b binding protein-like protein [Torenia fournieri]
Length = 96
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 91/93 (97%), Positives = 93/93 (100%)
Query: 87 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG 146
PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLG
Sbjct: 1 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLG 60
Query: 147 NPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
NPSLIHAQSILAIWACQV+LMGAVEGYRIAGGP
Sbjct: 61 NPSLIHAQSILAIWACQVILMGAVEGYRIAGGP 93
>gi|89574390|gb|ABD77412.1| chloroplast chlorophyll a/b-binding protein [Zingiber officinale]
Length = 130
Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 93/99 (93%), Positives = 97/99 (97%)
Query: 109 LGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG 168
LGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMG
Sbjct: 20 LGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMG 79
Query: 169 AVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAE 207
AVEGYR+AGGPLGEV DPLYPGGSF+PLGLADDPEAFAE
Sbjct: 80 AVEGYRVAGGPLGEVVDPLYPGGSFEPLGLADDPEAFAE 118
>gi|375152222|gb|AFA36569.1| putative chlorophyll a/b-binding protein, partial [Lolium perenne]
Length = 206
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/198 (56%), Positives = 129/198 (65%), Gaps = 10/198 (5%)
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG-VK 123
P +L GEFPGDYG+D AGL DP FA E++HCRWAMLGALG V PELL G V
Sbjct: 3 PEHLDGEFPGDYGFDIAGLGRDPVAFANYFNFEILHCRWAMLGALGVVVPELLDLFGIVH 62
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWACQVVLMGAVEGYRIAG---- 177
F E VW+K G LDYLG P L A Q I+ I CQ +LM E R G
Sbjct: 63 FVEPVWWKVGYAKLQGDTLDYLGIPGLRIAGGQGIIVIAICQALLMVGPEYARYCGIEAL 122
Query: 178 GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
PLG D YPGG+ FDPLGL+ DP AF ELKVKEIKNGRLAM + GF+VQA VTG
Sbjct: 123 EPLGIYLPGDLNYPGGALFDPLGLSKDPVAFEELKVKEIKNGRLAMVAWLGFYVQAAVTG 182
Query: 235 KGPLENLADHLADPVNNN 252
KGP++NL +HL+DP++NN
Sbjct: 183 KGPVQNLIEHLSDPLHNN 200
>gi|384251912|gb|EIE25389.1| putative chlorophyll a/b-binding protein [Coccomyxa subellipsoidea
C-169]
Length = 287
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/263 (44%), Positives = 149/263 (56%), Gaps = 9/263 (3%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSG 62
+ AL+ S +GK + N+ R+ + SPWYG +R K+LGP S
Sbjct: 23 AAVQALADSDLGKKLQRDLEANKSEYKRAEQQREKELAAARDESPWYGEERPKWLGPLSY 82
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+ P+YL G PGDY +D L+ D + F + E E++H RWAMLGALG PE+L +GV
Sbjct: 83 DYPAYLRGGAPGDYAYDPLQLAQDQDKFDQYFEFELLHARWAMLGALGAGIPEILQYSGV 142
Query: 123 -KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWACQVVLMGAVEGYRIAG-- 177
F EA W+ G L+YLG L A Q I I CQV+LM E R G
Sbjct: 143 SDFLEARWWAVGGAKLQGEDLNYLGVSGLRIAGGQGIAIIAICQVLLMFGPEYARACGIE 202
Query: 178 --GPLGEVT--DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 233
PLG D YPGG FDPLGL+ DP +FA+L+VKEIKNGRLA+ + GF QA VT
Sbjct: 203 ALEPLGLYLPGDKNYPGGLFDPLGLSKDPASFADLQVKEIKNGRLALVAWVGFAAQAAVT 262
Query: 234 GKGPLENLADHLADPVNNNAWAY 256
KGP+ +L D ADPV+NN +AY
Sbjct: 263 RKGPIADLLDFAADPVHNNIFAY 285
>gi|108864186|gb|ABG22426.1| Chlorophyll A-B binding protein, expressed [Oryza sativa Japonica
Group]
Length = 222
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 135/207 (65%), Gaps = 9/207 (4%)
Query: 50 GPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
GPDR +L E P YL GE PGDYG+D GLS PE F+K + E+IH RWAML
Sbjct: 6 GPDRRIFLPEGLLDRSEVPDYLNGEVPGDYGYDPFGLSKKPEDFSKYQAYELIHARWAML 65
Query: 107 GALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 165
GA G + PE + G G EAVWFK GA + L+Y GN I+ ++ A +VV
Sbjct: 66 GAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIVAVAAEVV 122
Query: 166 LMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
L+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM G
Sbjct: 123 LVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSMLG 180
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNN 252
FF+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 181 FFIQAYVTGEGPVENLSKHLSDPFGNN 207
>gi|308154410|gb|ADO15273.1| light harvesting complex from photosystem I type b [Oxytropis
splendens]
Length = 97
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/97 (94%), Positives = 94/97 (96%)
Query: 90 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 149
FAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS
Sbjct: 1 FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 60
Query: 150 LIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP 186
L+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DP
Sbjct: 61 LVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDP 97
>gi|22750|emb|CAA78900.1| Lhcb5 protein [Pinus sylvestris]
gi|1093837|prf||2104448A Lhcb5 gene
Length = 302
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 132/209 (63%), Gaps = 9/209 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L + P YL GE PGDYG+D GL PE F K + E+IH RWA
Sbjct: 84 WYGPDRRIFLPEGLLDRDDIPEYLNGEVPGDYGYDPFGLGRKPENFDKYQAYELIHARWA 143
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + G L Y G I+ ++A +
Sbjct: 144 MLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPIN---LIAAVVAE 200
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
VVL+G E YR G D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSM
Sbjct: 201 VVLVGGAEYYRATNGL--NFDDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 258
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 259 LGFFLQAYVTGEGPVENLAAHLSDPFGNN 287
>gi|449527935|ref|XP_004170963.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like, partial [Cucumis sativus]
Length = 117
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/113 (81%), Positives = 99/113 (87%), Gaps = 1/113 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59
MA STMALSS + G+AV L+P+ E+ + +MRKT SKSVSSGSPWYGPDRVKYLGP
Sbjct: 1 MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 112
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 113
>gi|149391069|gb|ABR25552.1| chloroplast chlorophyll a-b binding proteinr [Oryza sativa Indica
Group]
Length = 201
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 129/191 (67%), Gaps = 6/191 (3%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
E P YL GE PGDYG+D GLS PE F+K + E+IH RWAMLGA G + PE + G
Sbjct: 1 EVPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAYELIHARWAMLGAAGFIIPEACNKFGA 60
Query: 123 KFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG 181
G EAVWFK GA + L+Y GN I+ ++ A +VVL+G E YRI G
Sbjct: 61 NCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIVAVAAEVVLVGGAEYYRIINGL-- 115
Query: 182 EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP+ENL
Sbjct: 116 DLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPVENL 175
Query: 242 ADHLADPVNNN 252
+ HL+DP NN
Sbjct: 176 SKHLSDPFGNN 186
>gi|307106802|gb|EFN55047.1| hypothetical protein CHLNCDRAFT_35818 [Chlorella variabilis]
Length = 285
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 145/250 (58%), Gaps = 23/250 (9%)
Query: 22 SGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYL--GPFS-GEPPSYLTGEFPGDYGW 78
SG ++GG + +GSK+++ WYGPDR +L G + E L G PGDYG+
Sbjct: 26 SGTASTSGGWLG---SGSKTINL-DKWYGPDRALFLPGGLMARDEINPLLNGTLPGDYGY 81
Query: 79 DTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFS 138
D GL+ D ET +K + E++H RWAML A G + PE LA NG A WF+ GA + +
Sbjct: 82 DPLGLAKDAETLSKYQANELLHARWAMLAAAGAIIPEGLAANGADVKGATWFETGAAMLN 141
Query: 139 EGGLDYLGNP--SLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLG-------------E 182
G L++ P ++ + + + A V LMGA E YR G GP G +
Sbjct: 142 GGTLNWFAVPIANISNPLPLFVVVAANVALMGAAENYRRTGEGPAGYSPGVGKFDESAYD 201
Query: 183 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 242
D LYPGG FDPLGLADDPE AELKVKEIKNGRLAM S GF VQA VTG+GP N +
Sbjct: 202 SMDSLYPGGPFDPLGLADDPEVLAELKVKEIKNGRLAMVSFLGFAVQAAVTGEGPYANWS 261
Query: 243 DHLADPVNNN 252
H+ADP N
Sbjct: 262 KHVADPFGYN 271
>gi|308154406|gb|ADO15271.1| light harvesting complex from photosystem I type b [Oxytropis
campestris subsp. johannensis]
gi|308154408|gb|ADO15272.1| light harvesting complex from photosystem I type b [Oxytropis
maydelliana]
gi|308154412|gb|ADO15274.1| light harvesting complex from photosystem I type b [Oxytropis
arctobia]
Length = 96
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/96 (94%), Positives = 93/96 (96%)
Query: 91 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 150
AKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL
Sbjct: 1 AKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 60
Query: 151 IHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP 186
+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DP
Sbjct: 61 VHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDP 96
>gi|9719392|gb|AAF97781.1| chlorophyll a/b-binding protein [Picea glauca]
Length = 151
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/154 (63%), Positives = 111/154 (72%), Gaps = 8/154 (5%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MAT++ SS G+ + L P NEL ++ RI+MR+T + S WYGPDR K
Sbjct: 1 MATASAIQISSLAGQTL-LRPQQNELVSKMGASQARITMRRTVRSAPES--IWYGPDRPK 57
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 58 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 117
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 149
LLA+ GVKFGEAVWFKAG + G P+
Sbjct: 118 LLAKTGVKFGEAVWFKAGRRYSRREASTTWGTPT 151
>gi|93359558|gb|ABF13305.1| chloroplast chlorophyll a/b binding protein [Phaseolus vulgaris]
Length = 134
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/135 (73%), Positives = 109/135 (80%), Gaps = 3/135 (2%)
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFS + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L
Sbjct: 1 PFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 60
Query: 119 R-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
+ V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QVVLMG V G+RI G
Sbjct: 61 KWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVVGFRING 120
Query: 178 -GPLGEVTDPLYPGG 191
+GE + LYPGG
Sbjct: 121 LDGVGEGNN-LYPGG 134
>gi|169261106|gb|ACA52201.1| chloroplast chlorophyll A/B-binding protein [Oenothera elata subsp.
hookeri]
Length = 119
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/120 (80%), Positives = 102/120 (85%), Gaps = 7/120 (5%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS---VSSGSPWYGPDRVKY 56
MA STMALSS +F GKAV L+P E+ G I+MRKT K+ VSSGSPWYGPDRVKY
Sbjct: 3 MAASTMALSSPAFAGKAVKLSP---EVLTTGGITMRKTAGKAKPAVSSGSPWYGPDRVKY 59
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 60 LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 119
>gi|157965841|gb|ABW06957.1| chloroplast light-harvesting complex II protein precursor [Euglena
gracilis]
Length = 562
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/193 (52%), Positives = 129/193 (66%), Gaps = 9/193 (4%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
E P++LTGE+PGD G+D GL+ DPE FAKNR+ EV H RWAMLG +GC+ PE+ G+
Sbjct: 368 EAPAWLTGEYPGDRGFDPLGLAKDPEDFAKNRDSEVYHGRWAMLGLVGCLVPEVFGNLGI 427
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 182
A W++AGA + + G LDYLGNP+L+HA ++ I+ ++L +E +R G E
Sbjct: 428 AQLPA-WYEAGA-VANTGSLDYLGNPNLVHASNVPLIFFTTLLLFLPIEAWRWNGQIAPE 485
Query: 183 VTD---PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
YPGG FDPL L P ELK+KEIKNGRLAM MFGF+ Q+ VTG+GPL
Sbjct: 486 AKSAERTTYPGGPFDPLKLGASP----ELKLKEIKNGRLAMVGMFGFWAQSYVTGEGPLA 541
Query: 240 NLADHLADPVNNN 252
NLA HLADP +NN
Sbjct: 542 NLAAHLADPAHNN 554
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 125/193 (64%), Gaps = 9/193 (4%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
E P++LTGE+PGD G+D GL+ DP FAK R+ EV H RWAMLG +GC+ PE+ G+
Sbjct: 159 EAPTWLTGEYPGDRGFDPFGLAKDPADFAKFRDSEVFHGRWAMLGLVGCLVPEVFGNLGI 218
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 182
A W+ A A + + LDYLGNP+L+HA ++ I ++LMG VE +R G E
Sbjct: 219 AQLPA-WYDA-ATVANTSNLDYLGNPNLVHASNVSFIALSTLLLMGPVEAWRWNGALASE 276
Query: 183 VTD---PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
YPGG FDPL L P ELK+KEIKNGRLAM MFGF+ Q+ VTG+GPL
Sbjct: 277 AKSAERTTYPGGPFDPLKLGASP----ELKLKEIKNGRLAMVGMFGFWAQSYVTGEGPLA 332
Query: 240 NLADHLADPVNNN 252
NLA HLADP +NN
Sbjct: 333 NLAAHLADPAHNN 345
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 91/142 (64%), Gaps = 9/142 (6%)
Query: 114 PELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGY 173
PE+ G+ A W++AGA + + G LDYLGNP+L+HA ++ I+ ++L +E +
Sbjct: 1 PEVFGNLGIAQLPA-WYEAGA-VANTGSLDYLGNPNLVHASNVPLIFFTTLLLFLPIEAW 58
Query: 174 RIAG--GPLGEVTD-PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
R G P + + YPGG FDPL L PE LK+KEIKNGRLAM MFGF+ Q+
Sbjct: 59 RWNGQIAPDAKSKEWTTYPGGPFDPLKLGASPE----LKLKEIKNGRLAMVGMFGFWAQS 114
Query: 231 IVTGKGPLENLADHLADPVNNN 252
VTG+GPL NLA HLADP +NN
Sbjct: 115 YVTGEGPLANLAAHLADPAHNN 136
>gi|384253873|gb|EIE27347.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
Length = 330
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/224 (47%), Positives = 129/224 (57%), Gaps = 19/224 (8%)
Query: 48 WYGPDRVKYLGPFSGEP---PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGP R +L +P P+YL G GDYG+D GL D T K R E+IH RWA
Sbjct: 93 WYGPSRALFLPGGLLDPSDVPTYLNGTLAGDYGYDPLGLGKDTATVEKYRAYELIHARWA 152
Query: 105 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLI--HAQSILAIWAC 162
ML A G + PE L NG WF+ GA++ + G L+Y P I + + +
Sbjct: 153 MLAAAGIIIPEGLQANGAAIKGGTWFETGAEMLNGGTLNYFAVPWGIINNPLPLFLVVVI 212
Query: 163 QVVLMGAVEGYRIAG-GPLGEV-------------TDPLYPGGSFDPLGLADDPEAFAEL 208
+V L+GAVE YR +G GP G D LYPGG FDPLGLADDPE FAEL
Sbjct: 213 EVALLGAVERYRQSGEGPPGYSPGVGKFDSSIFSGLDNLYPGGPFDPLGLADDPETFAEL 272
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
KVKEIKNGRLA+ S+ GF VQ+ VTG+GP N + H+ADP N
Sbjct: 273 KVKEIKNGRLALISVLGFAVQSYVTGEGPYANWSKHVADPFGYN 316
>gi|225457685|ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic [Vitis vinifera]
gi|297745621|emb|CBI40786.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 120/260 (46%), Positives = 155/260 (59%), Gaps = 10/260 (3%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSG 62
T+ A+++S +G+++ N+ + S K ++ + S WYG +R ++LGP
Sbjct: 64 TAVKAIANSPLGESLQSRMEENKKAAVKNSSKFKALAEKAKNESLWYGEERPRWLGPIPY 123
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+ P+YLTGE PGDYG+D AGL DP F K E++H RWAML ALG + PELL G
Sbjct: 124 DYPAYLTGELPGDYGFDIAGLGKDPVAFQKYFNFEILHARWAMLAALGALLPELLDLLGA 183
Query: 123 -KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWACQVVLMGAVEGYRIAG-- 177
F E VW++ G LDYLG P A Q ++ I CQ +LM E R G
Sbjct: 184 FHFVEPVWWRVGYSKLKGDTLDYLGIPGFHFAGSQGVIVIAICQALLMVGPEYARYCGIE 243
Query: 178 --GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 232
PLG D YPGG+ FDPL L+ DP AF ELKVKEIKNGRLAM + GF++QA
Sbjct: 244 ALEPLGIYLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAA 303
Query: 233 TGKGPLENLADHLADPVNNN 252
TGKGP++NL DHLADP +NN
Sbjct: 304 TGKGPVQNLLDHLADPFHNN 323
>gi|375152320|gb|AFA36618.1| chlorophyll a/b binding protein, partial [Lolium perenne]
Length = 91
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/91 (95%), Positives = 90/91 (98%)
Query: 174 RIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 233
RIAGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVT
Sbjct: 1 RIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT 60
Query: 234 GKGPLENLADHLADPVNNNAWAYATNFVPGK 264
GKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 61 GKGPLENLADHLADPVNNNAWAFATNFVPGK 91
>gi|339716018|gb|AEJ88256.1| putative light harvesting chlorophyll a/b-binding protein [Wolffia
australiana]
Length = 92
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/92 (94%), Positives = 89/92 (96%)
Query: 173 YRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 232
YR+AGGPLGEV DPLYPGGSFDPL LA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV
Sbjct: 1 YRVAGGPLGEVVDPLYPGGSFDPLNLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 60
Query: 233 TGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
TGKGPLENLADHLADPVNNNAWAYATNFVPG
Sbjct: 61 TGKGPLENLADHLADPVNNNAWAYATNFVPGN 92
>gi|159483767|ref|XP_001699932.1| chlorophyll a-b binding protein [Chlamydomonas reinhardtii]
gi|158281874|gb|EDP07628.1| chlorophyll a-b binding protein [Chlamydomonas reinhardtii]
Length = 399
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 114/260 (43%), Positives = 141/260 (54%), Gaps = 12/260 (4%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSG 62
T+ ALS S VGK V + S WYGP R + GP
Sbjct: 132 TALTALSKSSVGKQVQEQLEAKLPELQAEADKTRAAHAEARRQSKWYGPSRPRLPGPLGS 191
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+L G GD G+D GLS + +FAK +E E++H RWAMLG +GC+ PELLA GV
Sbjct: 192 A--EHLIGAIAGDAGFDPLGLSKEQASFAKYQEAELLHARWAMLGVVGCLVPELLALRGV 249
Query: 123 KFGEAVWFKAGA-QIFSEGGLDYLGNPSLIHA--QSILAIWACQVVLMGAVEGYRIAG-- 177
GE VW+K GA ++ S+ L++ G A Q I I ACQ VLMG E R G
Sbjct: 250 DLGEPVWWKVGASKLNSDLTLNWGGIEGFRIAGKQGIGLIAACQAVLMGGPEYARYVGIR 309
Query: 178 --GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 232
P+G D YPGG FDPL A D + F E VKE+KNGRLAM +M GFFVQA V
Sbjct: 310 SLEPVGVFLPGDQNYPGGGPFDPLNYAADADGFVEQAVKEVKNGRLAMLAMLGFFVQAAV 369
Query: 233 TGKGPLENLADHLADPVNNN 252
T GP++N+ D +ADP +NN
Sbjct: 370 TRVGPVQNVLDFVADPAHNN 389
>gi|255539358|ref|XP_002510744.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223551445|gb|EEF52931.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 329
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 114/265 (43%), Positives = 155/265 (58%), Gaps = 20/265 (7%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTG-----SKSVSSGSPWYGPDRVKYL 57
T+ AL++S +G+++ L +++++++ + S WYG +R ++L
Sbjct: 62 TAVKALANSPLGESLQ-----RRLEESKKVAVKESSKFQALTAKARKESLWYGEERPRWL 116
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP + P+YLTGE PGDYG+D AGLS D F + E++H RWAML ALG + PE+L
Sbjct: 117 GPIPYDYPAYLTGELPGDYGFDVAGLSKDSVAFQRYFNFEILHARWAMLAALGALAPEVL 176
Query: 118 ARNGV-KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWACQVVLMGAVEGYR 174
+G F E VW++ G LDYLG P L A Q +L I CQ +LM E R
Sbjct: 177 DLSGAFHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGSQGVLVIAICQALLMVGPEYAR 236
Query: 175 IAG----GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 227
G PLG D YPGG FDPL L+ D A ELKVKEIKNGRLAM + GF+
Sbjct: 237 YCGIEALEPLGIYLPGDINYPGGPLFDPLNLSSDAVALEELKVKEIKNGRLAMVAWLGFY 296
Query: 228 VQAIVTGKGPLENLADHLADPVNNN 252
QA +TGKGP++NL +H++DP +NN
Sbjct: 297 AQAALTGKGPVQNLVEHISDPFHNN 321
>gi|118489770|gb|ABK96685.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 302
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 123/194 (63%), Gaps = 9/194 (4%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F K + E+IH RWA
Sbjct: 72 WYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFEKYQAFELIHARWA 131
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + L+Y G I +LA+ A +
Sbjct: 132 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-E 188
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
V+L+G E +RI G LG D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF+M
Sbjct: 189 VILVGGAEYFRITNG-LG-FDDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAM 246
Query: 224 FGFFVQAIVTGKGP 237
GFF+QA VTG P
Sbjct: 247 LGFFLQAYVTGDVP 260
>gi|212721622|ref|NP_001132387.1| light harvesting complex mesophyll7 [Zea mays]
gi|194694246|gb|ACF81207.1| unknown [Zea mays]
Length = 185
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 106/130 (81%), Gaps = 6/130 (4%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVS---SGSPWYGPDRVKY 56
MA+STMALSS+ F GKAVN+ PS + R++MRKT +K+ SGSPWYGPDRV Y
Sbjct: 1 MASSTMALSSTAFAGKAVNV-PSSSAFGEA-RVTMRKTAAKAKPAAASGSPWYGPDRVLY 58
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 59 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 118
Query: 117 LARNGVKFGE 126
LA + F E
Sbjct: 119 LADDPEAFAE 128
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/74 (90%), Positives = 69/74 (93%)
Query: 191 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 250
G P LADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADH+ADPVN
Sbjct: 112 GCVFPELLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 171
Query: 251 NNAWAYATNFVPGK 264
NNAWAYATNFVPGK
Sbjct: 172 NNAWAYATNFVPGK 185
>gi|77799163|gb|ABB03724.1| putative chloroplast chlorophyll A-B binding protein type II
[Sorghum bicolor]
Length = 113
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/102 (83%), Positives = 92/102 (90%)
Query: 163 QVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 222
QVVLMG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ AELKVKE+KNGRLAMFS
Sbjct: 12 QVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFS 71
Query: 223 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
MFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPG
Sbjct: 72 MFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGN 113
>gi|333691283|gb|AEF79974.1| chloroplast minor chlorophyll a-b binding protein of photosystem II
[Dunaliella salina]
Length = 283
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 128/224 (57%), Gaps = 19/224 (8%)
Query: 48 WYGPDRVKYL--GPFSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGP+R +L G + P YL GE GDYG+D GL D E K R E++H RWA
Sbjct: 46 WYGPERKLFLPGGLLDRDDVPEYLNGELAGDYGYDPLGLGKDEEQVEKYRANELLHARWA 105
Query: 105 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP--SLIHAQSILAIWAC 162
ML A G + PE L NG WF+ GA++ + G L+Y P + + + A+
Sbjct: 106 MLAAAGILIPEGLQANGADIKGGTWFETGAEMLNGGTLNYFAVPFGVVQNPLPLAAVTLI 165
Query: 163 QVVLMGAVEGYRIAG-GPLG-------------EVTDPLYPGGSFDPLGLADDPEAFAEL 208
++VL+GAVE +R+ G GP G + D LYPGG FDPL LADDPE FAEL
Sbjct: 166 EIVLLGAVEKFRVDGTGPAGFSPGVGKFDSDIFDGLDQLYPGGPFDPLNLADDPEVFAEL 225
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
+VKE KNGRLAM + F +Q+ VTG+GP N H++DP N
Sbjct: 226 QVKETKNGRLAMVGVLAFAIQSYVTGEGPYANFTKHISDPFGYN 269
>gi|307110008|gb|EFN58245.1| hypothetical protein CHLNCDRAFT_34387 [Chlorella variabilis]
Length = 336
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/252 (42%), Positives = 142/252 (56%), Gaps = 11/252 (4%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSG 62
+ AL+ S +GK + + + + ++ ++ SPW+G R +LGP S
Sbjct: 78 VAVQALADSKLGKDLLAGLEAQKPLLRRQAAQQEAERRAARQQSPWFGAARPLWLGPLST 137
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG- 121
+PP +L+GE PGDYGWD AGL DP + ELE++H RWAMLGALG V PELL G
Sbjct: 138 QPPQHLSGELPGDYGWDPAGLGRDPAKLDRYVELELLHARWAMLGALGAVVPELLQLAGS 197
Query: 122 VKFGEAVWFKAG-AQIFSEGGLDYLGNPSLIHA--QSILAIWACQVVLMGAVEGYRIAG- 177
F E W+ G A++ + L YLG P L A Q + I CQV+LM E R G
Sbjct: 198 ATFLEDRWWNVGYAKLTTGEELAYLGVPGLRVAGGQGVAIIAFCQVLLMFGPEYARACGI 257
Query: 178 ---GPLGEVT--DPLYPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 231
PLG D YPGG FDPL L+ D E + ++V+EIKNGRLAM + GF QA
Sbjct: 258 SALEPLGVFLPGDKNYPGGWLFDPLQLSGDAERYEAMRVREIKNGRLAMVAWLGFAAQAA 317
Query: 232 VTGKGPLENLAD 243
VT +GP++NL D
Sbjct: 318 VTRQGPVQNLLD 329
>gi|145078729|tpg|DAA05882.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm3 [Euglena gracilis]
Length = 244
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 111/161 (68%), Gaps = 4/161 (2%)
Query: 26 LSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSA 85
LS+ G ++M + +S WYGP+R +LGP S P +L GE PGDYG+D GL+
Sbjct: 85 LSDLGGVAMFAATGEKLSD---WYGPNRKLFLGPLSDGAPEHLKGELPGDYGFDVLGLAT 141
Query: 86 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARN-GVKFGEAVWFKAGAQIFSEGGLDY 144
P + R+ E+I+ RWAMLG +GC+ PELLARN GV F E VWFK GA +FSE GL+Y
Sbjct: 142 QPTRLERYRQGEIINGRWAMLGIVGCIVPELLARNYGVPFPEPVWFKTGATVFSEEGLNY 201
Query: 145 LGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTD 185
LGNPSLIHA+SI AI +++ +GA E +R++GGPLG TD
Sbjct: 202 LGNPSLIHAKSIAAILVTEILFVGAAEAFRVSGGPLGPATD 242
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 60/80 (75%)
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
GGPLG TD +YPG +FDPLGL+ D AFAELKVKE+KNGRLAM M G F+Q TGKG
Sbjct: 1 GGPLGPATDLVYPGKAFDPLGLSKDETAFAELKVKEVKNGRLAMLGMLGLFMQGFATGKG 60
Query: 237 PLENLADHLADPVNNNAWAY 256
PL+NLADHLADP N +
Sbjct: 61 PLQNLADHLADPTGANIITF 80
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 72 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 131
+PG +D GLS D FA+ + EV + R AMLG LG L G G K
Sbjct: 12 YPGK-AFDPLGLSKDETAFAELKVKEVKNGRLAMLGMLG------LFMQGFATG-----K 59
Query: 132 AGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GP-----LGEVT 184
Q ++ D G + Q +L+ V M A G +++ GP LG ++
Sbjct: 60 GPLQNLADHLADPTGANIITFHQRVLSDLGG--VAMFAATGEKLSDWYGPNRKLFLGPLS 117
Query: 185 D--PLYPGGS------FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 232
D P + G FD LGLA P + EI NGR AM + G V ++
Sbjct: 118 DGAPEHLKGELPGDYGFDVLGLATQPTRLERYRQGEIINGRWAMLGIVGCIVPELL 173
>gi|302849410|ref|XP_002956235.1| hypothetical protein VOLCADRAFT_66679 [Volvox carteri f.
nagariensis]
gi|300258538|gb|EFJ42774.1| hypothetical protein VOLCADRAFT_66679 [Volvox carteri f.
nagariensis]
Length = 276
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/269 (41%), Positives = 144/269 (53%), Gaps = 12/269 (4%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSG 62
T+ ALS S VGK V ++ + S WYG R + GP G
Sbjct: 10 TALTALSKSSVGKQVQQQLEARLPELRAEAERQRQAHQQARQRSKWYGASRPRLPGPLGG 69
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+L GE GD G+D L DP FA+ RE+E++H RWAMLG +GC+ PELLA GV
Sbjct: 70 A--QHLNGEEAGDAGFDPLELGKDPGAFARFREVELLHARWAMLGFVGCMVPELLALRGV 127
Query: 123 KFGEAVWFKAGA-QIFSEGGLDYLGNPSLIHA--QSILAIWACQVVLMGAVEGYRIAG-- 177
+ GE VW+K GA ++ S+ L++ G A Q I I ACQ VLMG E R G
Sbjct: 128 ELGEPVWWKVGASKLNSDLTLNWGGIEGFRIAGKQGIGLIAACQAVLMGGPEYARYVGIR 187
Query: 178 --GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 232
P+G D YPGG FDPL A D + F + V+EIKNGRLAM +M G FVQA V
Sbjct: 188 SLEPVGVFLPGDQNYPGGGPFDPLNYAADADGFVDQAVREIKNGRLAMVAMLGLFVQAAV 247
Query: 233 TGKGPLENLADHLADPVNNNAWAYATNFV 261
T KGP++N+ + ++DP N + +
Sbjct: 248 TKKGPVQNVMEFVSDPAGENIFTNVARLL 276
>gi|351066141|gb|AEQ39045.1| putative light-harvesting complex II chlorophyll-a/b binding
protein [Wolffia arrhiza]
Length = 84
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/84 (96%), Positives = 82/84 (97%)
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
GEVTDPLYPGGSFDPL LA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 1 GEVTDPLYPGGSFDPLNLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 60
Query: 241 LADHLADPVNNNAWAYATNFVPGK 264
LADHLADPVNNNAWAYATNFVPG
Sbjct: 61 LADHLADPVNNNAWAYATNFVPGN 84
>gi|383145055|gb|AFG54073.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145056|gb|AFG54074.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145057|gb|AFG54075.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145058|gb|AFG54076.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145059|gb|AFG54077.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145060|gb|AFG54078.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145061|gb|AFG54079.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145062|gb|AFG54080.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145063|gb|AFG54081.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145064|gb|AFG54082.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145065|gb|AFG54083.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145066|gb|AFG54084.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145067|gb|AFG54085.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145068|gb|AFG54086.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145069|gb|AFG54087.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145070|gb|AFG54088.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145071|gb|AFG54089.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145072|gb|AFG54090.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
Length = 83
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/83 (93%), Positives = 81/83 (97%)
Query: 91 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 150
AKNRELEVIH RWAMLGALGCVFPELLA+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L
Sbjct: 1 AKNRELEVIHSRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL 60
Query: 151 IHAQSILAIWACQVVLMGAVEGY 173
IHAQSILAIWACQVVLMG +EGY
Sbjct: 61 IHAQSILAIWACQVVLMGLIEGY 83
>gi|361068309|gb|AEW08466.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
Length = 83
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/83 (92%), Positives = 80/83 (96%)
Query: 91 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 150
AKNRELEVIH RWAMLGALGCVFPELLA+ GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L
Sbjct: 1 AKNRELEVIHSRWAMLGALGCVFPELLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL 60
Query: 151 IHAQSILAIWACQVVLMGAVEGY 173
IHAQSILAIWACQVVLMG +EGY
Sbjct: 61 IHAQSILAIWACQVVLMGLIEGY 83
>gi|302854487|ref|XP_002958751.1| hypothetical protein VOLCADRAFT_84624 [Volvox carteri f.
nagariensis]
gi|302854497|ref|XP_002958756.1| hypothetical protein VOLCADRAFT_78096 [Volvox carteri f.
nagariensis]
gi|300255926|gb|EFJ40207.1| hypothetical protein VOLCADRAFT_84624 [Volvox carteri f.
nagariensis]
gi|300255931|gb|EFJ40212.1| hypothetical protein VOLCADRAFT_78096 [Volvox carteri f.
nagariensis]
Length = 98
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/96 (81%), Positives = 84/96 (87%)
Query: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
MG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 1 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 60
Query: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
FVQAIVTGKGP+ENL DHLA+P NNA+A+AT F P
Sbjct: 61 FVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 96
>gi|22003726|gb|AAM88863.1|AF526508_1 A-B binding protein [Vicia faba]
Length = 136
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/119 (68%), Positives = 89/119 (74%), Gaps = 10/119 (8%)
Query: 10 SSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 69
+ F+ K NL S R +MR+T + S WYGPDR KYLGPFS + PSYLT
Sbjct: 18 NEFIRKVGNLGQS--------RFTMRRTVKSAPES--IWYGPDRPKYLGPFSEQIPSYLT 67
Query: 70 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 128
GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPELL +NGVKFGEA
Sbjct: 68 GEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAT 126
>gi|108709620|gb|ABF97415.1| Chlorophyll a-b binding protein, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
Length = 118
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/124 (66%), Positives = 95/124 (76%), Gaps = 11/124 (8%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVK 55
MA S + ++SF+G A P +EL +GGRI+MR+T + S WYGPDR K
Sbjct: 1 MAASALHQTTSFLGTA----PRRDELVRRVGDSGGRITMRRTVKSAPQS--IWYGPDRPK 54
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE
Sbjct: 55 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 114
Query: 116 LLAR 119
+L+R
Sbjct: 115 ILSR 118
>gi|449527137|ref|XP_004170569.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like,
partial [Cucumis sativus]
Length = 79
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 186 PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 245
P+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHL
Sbjct: 1 PIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 60
Query: 246 ADPVNNNAWAYATNFVPGK 264
DPVNNNAWAYATNFVPGK
Sbjct: 61 TDPVNNNAWAYATNFVPGK 79
>gi|15487728|gb|AAL00907.1|AF398729_1 ASCAB9-A [Dubautia raillardioides]
Length = 171
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 107/160 (66%), Gaps = 6/160 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+IH RWAMLGA GC+ PE + G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIHIN 61
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+ +VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
IKNGRLAMFSMF FF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNN 156
>gi|15487754|gb|AAL00920.1|AF398742_1 ASCAB9 [Centromadia pungens]
Length = 171
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 107/160 (66%), Gaps = 6/160 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+IH RWAMLGA GC+ PE + G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+ +VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
IKNGRLAMFSMF FF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNN 156
>gi|15487738|gb|AAL00912.1|AF398734_1 ASCAB9-C [Argyroxiphium sandwicense]
gi|15487744|gb|AAL00915.1|AF398737_1 ASCAB9-C [Dubautia laxa]
Length = 171
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 108/160 (67%), Gaps = 6/160 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+IH RWAMLGA GC+ PE + G G EAVWFK GA + L+Y G I
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPI- 60
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+++ +VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE
Sbjct: 61 --NLVVAVVTEVVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
IKNGRLAMFSMF FF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNN 156
>gi|209778997|gb|ACI87809.1| putative chloroplast chlorophyll a/b-binding protein [Cupressus
sempervirens]
Length = 85
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/85 (90%), Positives = 79/85 (92%)
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
L E DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+E
Sbjct: 1 LAEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 60
Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264
NL DHLADP NNAWAYATNFVPGK
Sbjct: 61 NLYDHLADPSTNNAWAYATNFVPGK 85
>gi|2570511|gb|AAB82141.1| chlorophyll a-b binding protein [Oryza sativa Indica Group]
Length = 304
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 133/261 (50%), Gaps = 23/261 (8%)
Query: 1 MATSTMALSSSFVGKAV----NLAPSGNELSN-----GGRISMRKTGSKSVSSGSPWYGP 51
MA++ MA +S + + PS + + GRI+M SK + WYGP
Sbjct: 1 MASTIMAPTSRVLAAKTPFLGHPRPSNAPVRDIAAAATGRITM----SKEL-----WYGP 51
Query: 52 DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 111
DRV YLGPFS + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC
Sbjct: 52 DRVNYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGC 111
Query: 112 VFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 170
+ PE+L + V F + + + P+ ++ W + G+
Sbjct: 112 ITPEVLEKWVRVHFKDPCGSRPAPKSSPTAASTTSATPTWCTPRASSPCWDSKSP-HGSR 170
Query: 171 EGYRIAGGP--LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 228
P LGE L P+GL P ++V+ + L S F
Sbjct: 171 PRLPHQRPPRRLGEQRA-LPRRAVLRPVGLRGGPRNLCGVQVQGDQECPLRQCSPCWVFC 229
Query: 229 QAIVTGKGPLENLADHLADPV 249
IVTGKGPLENL DH ADPV
Sbjct: 230 PGIVTGKGPLENLLDHFADPV 250
>gi|15487716|gb|AAL00901.1|AF398723_1 ASCAB9-A [Argyroxiphium caliginis]
gi|15487720|gb|AAL00903.1|AF398725_1 ASCAB9-A [Dubautia laevigata]
gi|15487726|gb|AAL00906.1|AF398728_1 ASCAB9-A [Dubautia plantaginea]
gi|15487730|gb|AAL00908.1|AF398730_1 ASCAB9-A [Dubautia sherffiana]
gi|15487732|gb|AAL00909.1|AF398731_1 ASCAB9-A [Wilkesia gymnoxiphium]
gi|15487734|gb|AAL00910.1|AF398732_1 ASCAB9-B [Argyroxiphium caliginis]
gi|15487736|gb|AAL00911.1|AF398733_1 ASCAB9-B [Argyroxiphium sandwicense]
gi|15487740|gb|AAL00913.1|AF398735_1 ASCAB9-B [Dubautia laevigata]
gi|15487742|gb|AAL00914.1|AF398736_1 ASCAB9-C [Dubautia latifolia]
gi|15487746|gb|AAL00916.1|AF398738_1 ASCAB9-B [Dubautia plantaginea]
gi|15487748|gb|AAL00917.1|AF398739_1 ASCAB9-C [Dubautia scabra]
gi|15487750|gb|AAL00918.1|AF398740_1 ASCAB9-B [Wilkesia gymnoxiphium]
gi|15487758|gb|AAL00922.1|AF398744_1 ASCAB9 [Harmonia nutans]
gi|15487760|gb|AAL00923.1|AF398745_1 ASCAB9 [Osmadenia tenella]
gi|15487764|gb|AAL00925.1|AF398747_1 ASCAB9 [Anisocarpus scabridus]
gi|156046244|gb|ABU42590.1| ASCAB9 [Dubautia arborea]
gi|156046246|gb|ABU42591.1| ASCAB9 [Dubautia arborea]
Length = 171
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 107/160 (66%), Gaps = 6/160 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+IH RWAMLGA GC+ PE + G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+ +VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
IKNGRLAMFSMF FF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNN 156
>gi|15487752|gb|AAL00919.1|AF398741_1 ASCAB9-C [Wilkesia gymnoxiphium]
Length = 171
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 107/160 (66%), Gaps = 6/160 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+IH RWAMLGA GC+ PE + G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+ +VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
IKNGRLAMFSMF FF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNN 156
>gi|302854499|ref|XP_002958757.1| hypothetical protein VOLCADRAFT_108301 [Volvox carteri f.
nagariensis]
gi|300255932|gb|EFJ40213.1| hypothetical protein VOLCADRAFT_108301 [Volvox carteri f.
nagariensis]
Length = 112
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%), Gaps = 7/110 (6%)
Query: 160 WACQVVLMGAV-------EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
AC + ++ AV GYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKE
Sbjct: 1 MACCISVLTAVFSPALAAHGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKE 60
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
IKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLA+P NNA+A+AT F P
Sbjct: 61 IKNGRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 110
>gi|210162154|gb|ACJ09675.1| putative chlorophyll a/b-binding protein [Cupressus sempervirens]
Length = 129
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/125 (72%), Positives = 95/125 (76%), Gaps = 8/125 (6%)
Query: 47 PWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
PWY DRV YL P S EPPSYLTGEF DYG DTA S D ET AKNRELEVIH R +ML
Sbjct: 13 PWYEQDRVLYLTPMS-EPPSYLTGEFTSDYGCDTAS-STDTETCAKNRELEVIHSR-SML 69
Query: 107 GALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
AL CV LA GV EAVWF AGA +FSEGGLDYLG+ SLIHAQSILAIWACQV+L
Sbjct: 70 SALRCVVA--LATYGVSIVEAVWF-AGA-LFSEGGLDYLGS-SLIHAQSILAIWACQVIL 124
Query: 167 MGAVE 171
MGAVE
Sbjct: 125 MGAVE 129
>gi|308809197|ref|XP_003081908.1| putative chlorophyll a/b-binding protein (ISS) [Ostreococcus tauri]
gi|63029305|gb|AAY27551.1| chloroplast Lhcq-like protein precursor [Ostreococcus tauri]
gi|116060375|emb|CAL55711.1| putative chlorophyll a/b-binding protein (ISS) [Ostreococcus tauri]
Length = 242
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 129/220 (58%), Gaps = 12/220 (5%)
Query: 35 RKTGSKSVSSG-SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 93
RK ++ + G S +YG +RVK+LG E P++L G GD G+D L+A E +
Sbjct: 17 RKEMERAEARGRSAFYGANRVKFLGDLEYEYPAHLDGTLCGDVGFDPLNLAAKSEDLERY 76
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAG-AQIFSEGGLDYLGNPSLI 151
RELE++H RWAMLG +G PE L R GV GE VW+K G A++ S+ LDYLG
Sbjct: 77 RELELLHGRWAMLGVVGAAVPETLDRFGVANLGEPVWWKVGAAKMNSDIALDYLGFSGFH 136
Query: 152 HA--QSILAIWACQVVLMGAVEGYRIAG----GPLGEVT--DPLYPGGS-FDPLGLADDP 202
A I I ACQ+VLMG E R G P+G D YPGG+ FDP +DD
Sbjct: 137 IAGGSGIAVIAACQLVLMGGPEYARYVGINSLEPVGVYLPGDKDYPGGAPFDPFKFSDDA 196
Query: 203 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 242
E F + KV EIK+ RLAM + G +QAIVT +GP+ENLA
Sbjct: 197 EEFEKQKVMEIKHCRLAMIAALGCAIQAIVTRQGPIENLA 236
>gi|15487724|gb|AAL00905.1|AF398727_1 ASCAB9-A [Dubautia laxa]
Length = 171
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 107/160 (66%), Gaps = 6/160 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+IH RWAMLGA GC+ PE + G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+ +VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
IKNGRLAMFSMF FF++A VTG+GP+ENLA HL+DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIKAYVTGQGPVENLASHLSDPFGNN 156
>gi|86169487|gb|ABC86983.1| chlorophyll a/b binding protein [Brassica napus]
Length = 75
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/75 (97%), Positives = 75/75 (100%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
SGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 1 SGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARN 60
Query: 121 GVKFGEAVWFKAGAQ 135
GVKFGEAVWFKAG+Q
Sbjct: 61 GVKFGEAVWFKAGSQ 75
>gi|156046250|gb|ABU42593.1| ASCAB9 [Dubautia arborea]
Length = 171
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 106/160 (66%), Gaps = 6/160 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+ H RWAMLGA GC+ PE + G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELTHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+ +VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
IKNGRLAMFSMF FF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNN 156
>gi|168998334|gb|ACA42563.1| hypothetical protein [Camellia sinensis]
Length = 81
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/98 (82%), Positives = 81/98 (82%), Gaps = 17/98 (17%)
Query: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
MGAVEGYRIAGGPLGEVTDPLYP ELKVKEIKNGRLAMFSMFGF
Sbjct: 1 MGAVEGYRIAGGPLGEVTDPLYP-----------------ELKVKEIKNGRLAMFSMFGF 43
Query: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 44 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 81
>gi|15487762|gb|AAL00924.1|AF398746_1 ASCAB9 [Carlquistia muirii]
Length = 171
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 106/160 (66%), Gaps = 6/160 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+IH RWAMLGA GC+ PE + G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+ +VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
IKNGRLAMFSMF FF+QA V G+GP+ENLA HL+DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVAGQGPVENLASHLSDPFGNN 156
>gi|156046248|gb|ABU42592.1| ASCAB9 [Dubautia arborea]
Length = 171
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 107/160 (66%), Gaps = 6/160 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+IH RWAMLGA GC+ PE + G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+ +VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
IKNGRLAMFSMF FF+QA VTG+GP+E+LA HL+DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVESLASHLSDPFGNN 156
>gi|15487722|gb|AAL00904.1|AF398726_1 ASCAB9-A [Dubautia latifolia]
Length = 171
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 106/160 (66%), Gaps = 6/160 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+IH RWAMLGA GC+ PE + G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIHIN 61
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+ +VVL+G E YRI G ++ D L+ GG FDPLGLA DP+ FA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGL--DLEDKLHHGGPFDPLGLAKDPDQFALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
IKNGRLAMFSMF FF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNN 156
>gi|156046252|gb|ABU42594.1| ASCAB9 [Dubautia arborea]
Length = 171
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 106/160 (66%), Gaps = 6/160 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+ H RWAMLGA GC+ PE + G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELTHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+ +VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
IKNGRLAMFSMF FF+QA VTG+GP+ENLA H++DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVENLASHMSDPFGNN 156
>gi|15487756|gb|AAL00921.1|AF398743_1 ASCAB9 [Deinandra lobbii]
Length = 171
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 106/160 (66%), Gaps = 6/160 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+IH RWAMLGA GC+ PE + G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+ +VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
IKNGRLAMFSMF FF+QA VTG+ P+ENLA HL+DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQCPVENLASHLSDPFGNN 156
>gi|169193|gb|AAA33700.1| Major Cab protein [Petunia x hybrida]
Length = 76
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/76 (98%), Positives = 76/76 (100%)
Query: 189 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP
Sbjct: 1 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 60
Query: 249 VNNNAWAYATNFVPGK 264
VNNNAW+YATNFVPGK
Sbjct: 61 VNNNAWSYATNFVPGK 76
>gi|87313189|gb|ABD37891.1| light-harvesting chlorophyll-a/b binding protein Lhcb5 [Mesostigma
viride]
Length = 280
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 121/212 (57%), Gaps = 11/212 (5%)
Query: 48 WYGPDRVKYLGPFSGEP---PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR KYL +P P+Y+ GE GDYG+D GL + K R EV+H RWA
Sbjct: 58 WYGPDRPKYLPTGLLDPADIPAYMNGELAGDYGYDPLGL-GNKGGVEKYRPYEVLHGRWA 116
Query: 105 MLGALGCVFPELLARNG-VKFGEAVWFKAGAQIFS-EGGLDYLGNPSLIHAQSILAIWAC 162
MLG +G + PE L NG AVW+ +GA + L + G P+ + ++ I+
Sbjct: 117 MLGVVGMLVPEGLYANGNTNIKGAVWWDSGAVLLDPSATLTWAGIPNPV-PLALAVIFEV 175
Query: 163 QVVLMGAVEGYRIA-GGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAM 220
V + +E YR GP G DPLYPGG FDPLGLA DP ELKVKEIKNGRLAM
Sbjct: 176 AVFFL--IENYRYQQDGPWGTGLDPLYPGGKYFDPLGLASDPSKADELKVKEIKNGRLAM 233
Query: 221 FSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
+ GF VQ VT +GP N + HLADP N
Sbjct: 234 MAFLGFVVQYFVTKEGPYANWSKHLADPFGYN 265
>gi|15487718|gb|AAL00902.1|AF398724_1 ASCAB9-A [Argyroxiphium sandwicense]
Length = 171
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 106/160 (66%), Gaps = 6/160 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+IH RWAMLGA GC+ PE + G G EAVWFK A + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTRALLLDGNTLNYFGKNIPIN 61
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+ +VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
IKNGRLAMFSMF FF++A VTG+GP+ENLA HL+DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIKAYVTGQGPVENLASHLSDPFGNN 156
>gi|145079746|tpg|DAA05928.1| TPA_inf: chloroplast light-harvesting complex protein CP26
precursor Lhcb5 [Mesostigma viride]
Length = 287
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 121/212 (57%), Gaps = 11/212 (5%)
Query: 48 WYGPDRVKYLGPFSGEP---PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR KYL +P P+Y+ GE GDYG+D GL + K R EV+H RWA
Sbjct: 65 WYGPDRPKYLPTGLLDPADIPAYMNGELAGDYGYDPLGL-GNKGGVEKYRPYEVLHGRWA 123
Query: 105 MLGALGCVFPELLARNG-VKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWAC 162
MLG +G + PE L NG AVW+ +GA + L + G P+ + ++ I+
Sbjct: 124 MLGVVGMLVPEGLYANGNTNIKGAVWWDSGAVLLDPSATLTWAGIPNPV-PLALAVIFEV 182
Query: 163 QVVLMGAVEGYRIA-GGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAM 220
V + +E YR GP G DPLYPGG FDPLGLA DP ELKVKEIKNGRLAM
Sbjct: 183 AVFFL--IENYRYQQDGPWGTGLDPLYPGGKYFDPLGLASDPSKADELKVKEIKNGRLAM 240
Query: 221 FSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
+ GF VQ VT +GP N + HLADP N
Sbjct: 241 MAFLGFVVQYFVTKEGPYANWSKHLADPFGYN 272
>gi|145351847|ref|XP_001420273.1| chlorophyll a/b binding, possibly photosystem II light harvesting
complex [Ostreococcus lucimarinus CCE9901]
gi|144580507|gb|ABO98566.1| chlorophyll a/b binding, possibly photosystem II light harvesting
complex [Ostreococcus lucimarinus CCE9901]
Length = 365
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 120/208 (57%), Gaps = 13/208 (6%)
Query: 46 SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 105
S YG RVK+LG E P++L G GD G+D GL D + RELE++H RWAM
Sbjct: 155 SSLYGARRVKFLGDAEYEYPAHLDGSLCGDAGFDPLGLGKD--DLPRMRELELLHARWAM 212
Query: 106 LGALGCVFPELLARNGV-KFGEAVWFKAGA-QIFSEGGLDYLGNPSLIHA--QSILAIWA 161
LG +G PELL R GV GE VW+K GA ++ S+ LDY G A I I A
Sbjct: 213 LGIVGVAVPELLERYGVADLGEPVWWKVGAAKMNSDVSLDYFGLQGFHIAGGSGIAIIAA 272
Query: 162 CQVVLMGAVEGYRIAG----GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIK 214
CQVVLMG E R G P+G D YPGG+ FDP ++DD + F + KV EIK
Sbjct: 273 CQVVLMGGPEYARYVGIDSLEPVGVYLPGDKDYPGGAPFDPFKISDDADEFEKQKVMEIK 332
Query: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLA 242
+GRLAM +M G QA VT GP+ENLA
Sbjct: 333 HGRLAMIAMLGVAAQAFVTRAGPIENLA 360
>gi|154357560|gb|ABS78804.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 103/153 (67%), Gaps = 6/153 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+IH RWAMLGA G + PE L + G G EAVWFK GA + L+Y G I
Sbjct: 2 QAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 59
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+LA+ A +VVL+G E YRI G + D L+PGG FDPLGLA DPE A LKVKE
Sbjct: 60 INLVLAVIA-EVVLLGGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 245
IKNGRLAMF+M GFF+QA VTG+GP+ENLA HL
Sbjct: 117 IKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHL 149
>gi|169261096|gb|ACA52196.1| chloroplast chlorophyll A/B-binding protein [Oenothera grandiflora]
Length = 109
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/105 (74%), Positives = 88/105 (83%), Gaps = 9/105 (8%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTG-----SKSVSSGSPWYGPDRVKYL 57
+STM++SS F+GKAV L+P E+ G+++MRKT +KS SSGSPWYGPDRVKYL
Sbjct: 9 SSTMSVSS-FMGKAVKLSP---EVLGTGKVTMRKTAGKTKQTKSASSGSPWYGPDRVKYL 64
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 102
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH R
Sbjct: 65 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 109
>gi|1262849|gb|AAB19041.1| type 1 light-harvesting chlorophyll a/b-binding polypeptide,
partial [Pinus palustris]
Length = 95
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/84 (89%), Positives = 77/84 (91%)
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
G P P GSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+EN
Sbjct: 12 GRGDRPHLPRGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIEN 71
Query: 241 LADHLADPVNNNAWAYATNFVPGK 264
LADHLADPVNNNAWAYATNFVPGK
Sbjct: 72 LADHLADPVNNNAWAYATNFVPGK 95
>gi|16225450|gb|AAL15892.1|AF417304_1 putative chlorophyll-A-B-binding protein [Castanea sativa]
Length = 120
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 92/125 (73%), Gaps = 11/125 (8%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRV 54
MA+ST+ S+F G+ NEL GGR++MR+T + S WYGPDR
Sbjct: 1 MASSTIQ-RSAFAGQTA--LKQSNELVRKVGSFAGGRVTMRRTVKSAPQS--IWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFP DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPEDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115
Query: 115 ELLAR 119
E+L++
Sbjct: 116 EILSK 120
>gi|75265661|sp|Q9SDM1.1|CB121_HORVU RecName: Full=Chlorophyll a-b binding protein 1B-21, chloroplastic;
AltName: Full=LHCI type I CAB-1B-21; AltName:
Full=LHCI-730 chlorophyll a/b binding protein; AltName:
Full=Light-harvesting complex I 21 kDa protein; Flags:
Precursor
gi|6685157|gb|AAF23819.1|AF218305_2 chlorophyll a/b binding protein precursor [Hordeum vulgare]
Length = 245
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/255 (40%), Positives = 132/255 (51%), Gaps = 26/255 (10%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
MA+S+ S S VG LAPS +G T S V+ + W F
Sbjct: 1 MASSSGLRSCSAVGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAEW-----------F 49
Query: 61 SGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
G+P P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML G + PE L
Sbjct: 50 PGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEAL-- 107
Query: 120 NGVKFGEAVWFKAGA-QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
G W KA +G YLGNP + ++ I A + + + E R
Sbjct: 108 -----GLGNWVKAQEWAALPDGQATYLGNP--VPWGNLPTILAIEFLAIAFAEQQRTMEK 160
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGP 237
+ YPGG+FDPLG + DP F ELK+KEIKNGRLAM + GF V Q+ G GP
Sbjct: 161 ---DPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGP 217
Query: 238 LENLADHLADPVNNN 252
LENLA HLADP +NN
Sbjct: 218 LENLATHLADPWHNN 232
>gi|225690802|gb|ACO06087.1| chlorophyll a-b binding protein [Triticum aestivum]
Length = 291
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/259 (40%), Positives = 133/259 (51%), Gaps = 32/259 (12%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
MA+S+ S S VG LAPS +G T S V+ + W F
Sbjct: 26 MASSSGLRSCSAVGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAEW-----------F 74
Query: 61 SGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
G+P P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML G + PE L
Sbjct: 75 PGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEAL-- 132
Query: 120 NGVKFGEAVWFKAGA-QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
G W KA +G YLGNP + ++ I A + + + E R
Sbjct: 133 -----GLGNWVKAQEWAALPDGQATYLGNP--VPWGNLPTILAIEFLAIAFAEQQRTM-- 183
Query: 179 PLGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTG 234
DP YPGG+FDPLG + DP F ELK+KEIKNGRLAM + GF V Q+ G
Sbjct: 184 ----EKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPG 239
Query: 235 KGPLENLADHLADPVNNNA 253
GPLENLA HLADP +N +
Sbjct: 240 TGPLENLATHLADPWHNTS 258
>gi|302804514|ref|XP_002984009.1| light-harvesting complex [Selaginella moellendorffii]
gi|300148361|gb|EFJ15021.1| light-harvesting complex [Selaginella moellendorffii]
Length = 246
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 128/247 (51%), Gaps = 38/247 (15%)
Query: 9 SSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEP-PSY 67
S F G A+ G SNG R+SM + W G+P P+Y
Sbjct: 24 KSKFFGSAITT--PGAAFSNGSRVSM----------SAEW-----------LPGQPRPAY 60
Query: 68 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 127
L G PGD+G+D GL P+ + +E E+IHCRWAML GC+ PE L G
Sbjct: 61 LDGSAPGDFGFDPLGLGEVPDNLERFKESELIHCRWAMLAVPGCLIPEAL-------GLG 113
Query: 128 VWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP 186
W +A + GG YLG P + ++ I A + V + VE RI G P E
Sbjct: 114 NWVEAQQWAATPGGQATYLGTP--VPWGTLPVIIAIEFVAIAFVESRRI-GVPSAEKRK- 169
Query: 187 LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHL 245
YPGG+FDPLG + DP+ F E K+KE+KNGRLA+ + GF QA G GPL+NLA HL
Sbjct: 170 -YPGGAFDPLGFSKDPKKFEEFKLKEVKNGRLALLAFLGFCAQAAAYPGTGPLQNLATHL 228
Query: 246 ADPVNNN 252
ADP +NN
Sbjct: 229 ADPWHNN 235
>gi|193875802|gb|ACF24537.1| light harvesting complex protein LHCII-2 [Gymnochlora stellata]
Length = 248
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 96/142 (67%), Gaps = 6/142 (4%)
Query: 35 RKTGSKSV--SSGSPWYGPDRVKYL-GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 91
+ +G+K++ + WYGPDR K+L F P YLTGE+PGDYGWD GLSADP+ FA
Sbjct: 105 QTSGNKALMGACNVEWYGPDRPKWLPDAFLAGVPDYLTGEYPGDYGWDALGLSADPQNFA 164
Query: 92 KNRELEVIHCRWAMLGALGCVFPELLAR--NGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 149
RE E++H RWAMLGALGCVFPE++ NG E VW+KAGA + + +DYLG+
Sbjct: 165 NYREAELLHARWAMLGALGCVFPEVINSYYNG-NIAEPVWWKAGALVLNGQSIDYLGSDK 223
Query: 150 LIHAQSILAIWACQVVLMGAVE 171
IHA SI+AI QVVLMG E
Sbjct: 224 FIHASSIIAIAGAQVVLMGGAE 245
>gi|223949713|gb|ACN28940.1| unknown [Zea mays]
Length = 159
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/149 (57%), Positives = 100/149 (67%), Gaps = 6/149 (4%)
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G V PE + G G EAVWFK GA + L Y GN I ++A+ A +
Sbjct: 1 MLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLSYFGNS--IPINLVVAVIA-E 57
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM
Sbjct: 58 VVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAAILKVKEIKNGRLAMFSM 115
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
F FF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 116 FAFFIQAYVTGEGPVENLAKHLSDPFGNN 144
>gi|356502352|ref|XP_003519983.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
[Glycine max]
Length = 104
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/84 (85%), Positives = 75/84 (89%)
Query: 175 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
IAGGPLGEV DP+Y GS DPLGLADDPE FAELKVKE KN RLAMFSMFGFFVQAIVTG
Sbjct: 9 IAGGPLGEVIDPIYLEGSIDPLGLADDPEVFAELKVKEFKNRRLAMFSMFGFFVQAIVTG 68
Query: 235 KGPLENLADHLADPVNNNAWAYAT 258
KG LENL +HLA+PVNNNAWAYAT
Sbjct: 69 KGSLENLTNHLANPVNNNAWAYAT 92
>gi|145079397|tpg|DAA05913.1| TPA_inf: chloroplast light-harvesting complex protein CP26
precursor Lhcb5 [Acetabularia acetabulum]
Length = 245
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 103/182 (56%), Gaps = 19/182 (10%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGP RV +L + P+YLTG+ GDYG+D GL DPE K R E+IH RWA
Sbjct: 64 WYGPSRVLFLPSGLLERSDVPAYLTGDLAGDYGYDPLGLGKDPEQVQKYRAFELIHARWA 123
Query: 105 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ--SILAIWAC 162
ML A G + PE LA NG A WF+ GA++ + G L+Y P I + + AI A
Sbjct: 124 MLAAAGMIIPEGLAANGADIKGATWFETGAEMLNGGTLNYFAVPWAIVSNPLPLFAIVAV 183
Query: 163 QVVLMGAVEGYRIAG-GPLG-------------EVTDPLYPGGSFDPLGLADDPEAFAEL 208
+V LMGA E YR G GP G + D L+PGG FDPLGLADDPE F EL
Sbjct: 184 EVGLMGAAENYRRTGTGPKGYSPGVGNFESSVFDGLDSLHPGGPFDPLGLADDPEVFQEL 243
Query: 209 KV 210
KV
Sbjct: 244 KV 245
>gi|8698905|gb|AAF78518.1|AF195221_1 chlorophyll a/b-binding protein [Pyrus pyrifolia]
Length = 79
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/76 (94%), Positives = 74/76 (97%)
Query: 105 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV 164
MLGALGCVFPELL+RNGVKFGEAVWFKAGAQIFSEGGL YLGNPSL+HAQSILAIWA QV
Sbjct: 1 MLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLGYLGNPSLVHAQSILAIWATQV 60
Query: 165 VLMGAVEGYRIAGGPL 180
VLMGAVEGYRIAGGPL
Sbjct: 61 VLMGAVEGYRIAGGPL 76
>gi|302854495|ref|XP_002958755.1| hypothetical protein VOLCADRAFT_69853 [Volvox carteri f.
nagariensis]
gi|300255930|gb|EFJ40211.1| hypothetical protein VOLCADRAFT_69853 [Volvox carteri f.
nagariensis]
Length = 88
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 76/86 (88%)
Query: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 1 GGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 60
Query: 237 PLENLADHLADPVNNNAWAYATNFVP 262
P+ENL DHLA+P NNA+A+AT F P
Sbjct: 61 PIENLNDHLANPAVNNAFAFATKFTP 86
>gi|302844283|ref|XP_002953682.1| hypothetical protein VOLCADRAFT_106034 [Volvox carteri f.
nagariensis]
gi|300261091|gb|EFJ45306.1| hypothetical protein VOLCADRAFT_106034 [Volvox carteri f.
nagariensis]
Length = 143
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 79/98 (80%)
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
++LMG VEGYR+ G P GE DPLY G SFDPLGLADDP+ F EL VKE KNGRLAMFSM
Sbjct: 43 MILMGLVEGYRVNGSPAGEGLDPLYHGESFDPLGLADDPDTFTELMVKETKNGRLAMFSM 102
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV 261
FGFF+QAIVTG P+ENL DHLA+P NNA+A+AT V
Sbjct: 103 FGFFMQAIVTGNDPIENLNDHLANPGVNNAFAFATKLV 140
>gi|192764699|gb|ACF05893.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764701|gb|ACF05894.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764703|gb|ACF05895.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764707|gb|ACF05897.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764709|gb|ACF05898.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764711|gb|ACF05899.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764713|gb|ACF05900.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764715|gb|ACF05901.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764717|gb|ACF05902.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764719|gb|ACF05903.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764721|gb|ACF05904.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764723|gb|ACF05905.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764727|gb|ACF05907.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764729|gb|ACF05908.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764731|gb|ACF05909.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764733|gb|ACF05910.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764735|gb|ACF05911.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764737|gb|ACF05912.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764739|gb|ACF05913.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764741|gb|ACF05914.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764743|gb|ACF05915.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764745|gb|ACF05916.1| chloroplast light-harvesting complex II protein [Populus tremula]
Length = 111
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/112 (72%), Positives = 89/112 (79%), Gaps = 4/112 (3%)
Query: 98 VIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 156
VIH RWAMLGALGC+ PE+L + V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 1 VIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSI 60
Query: 157 LAIWACQVVLMGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFA 206
LA+ QVVLMG VEG+RI G P +GE D LYPGG FDPLGLADDP FA
Sbjct: 61 LAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPATFA 111
>gi|414881721|tpg|DAA58852.1| TPA: chlorophyll a-b binding protein 2, mRNA [Zea mays]
Length = 311
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/106 (69%), Positives = 83/106 (78%), Gaps = 6/106 (5%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYL 57
MA +TMA++S + VGK A ++ GRI+MRKT +K +SGSPWYG DRV YL
Sbjct: 1 MAAATMAITSRALVGKP---AAGTRDVFGEGRITMRKTAAKPKPAASGSPWYGADRVLYL 57
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 103
GP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW
Sbjct: 58 GPLSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 103
>gi|303281804|ref|XP_003060194.1| chlorophyll a/b-binding protein [Micromonas pusilla CCMP1545]
gi|226458849|gb|EEH56146.1| chlorophyll a/b-binding protein [Micromonas pusilla CCMP1545]
Length = 391
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 115/209 (55%), Gaps = 16/209 (7%)
Query: 46 SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 105
SP YG + L P PP +LTG GD G+D L PE+ A+ ELE++H RWAM
Sbjct: 171 SPLYG--EARPLLPGISSPPPHLTGTLAGDRGFDPLRLGKTPESLARGVELELLHARWAM 228
Query: 106 LGALGCVFPELLA-----RNGVKFGEAVWFKAGAQIFSEGGLDY--LGNPSLIHAQSILA 158
L +G PE L+ G E VW+K GA + L+Y LG + Q +
Sbjct: 229 LAVVGVAVPEALSIAGALPEGAALAEPVWWKVGAAKLNGESLNYGGLGGFVIAGKQGVAV 288
Query: 159 IWACQVVLMGAVEGYRIAG----GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVK 211
I ACQ VLMG E R G P+G D YPGG+ FDP GL+DD + FA KV
Sbjct: 289 IAACQAVLMGGPEYARYVGIRSLEPVGVYLPGDANYPGGAPFDPFGLSDDADRFARQKVI 348
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
EI++GRLAM +M G F QAIVTG+GP+ N
Sbjct: 349 EIEHGRLAMVAMLGCFAQAIVTGEGPVAN 377
>gi|242060664|ref|XP_002451621.1| hypothetical protein SORBIDRAFT_04g004770 [Sorghum bicolor]
gi|241931452|gb|EES04597.1| hypothetical protein SORBIDRAFT_04g004770 [Sorghum bicolor]
Length = 245
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 130/255 (50%), Gaps = 27/255 (10%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
MA+S+ S S VG LAPS + S+ T S V+ + W
Sbjct: 3 MASSSGLRSCSAVGVPSLLAPS-SRWSSRLPFCANATTSGRVTMSAEW-----------M 50
Query: 61 SGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
G+P P++L G PGD+G+D GL+ PE F + +E EV HCRWAML G + PE L
Sbjct: 51 PGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGILVPEAL-- 108
Query: 120 NGVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
G W KA GG YLGNP + S+ I + V + E R
Sbjct: 109 -----GLGNWVKAQEWAAVPGGQATYLGNP--VPWGSLPTILVIEFVAIAFAEHQRTME- 160
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGP 237
+ YPGG+FDPLG + DP F E K+KEIKNGRLAM + GF V Q+ G GP
Sbjct: 161 --KDPEKKKYPGGAFDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGP 218
Query: 238 LENLADHLADPVNNN 252
LENLA HLADP +NN
Sbjct: 219 LENLATHLADPWHNN 233
>gi|116791821|gb|ABK26121.1| unknown [Picea sitchensis]
gi|224284036|gb|ACN39756.1| unknown [Picea sitchensis]
gi|224284482|gb|ACN39975.1| unknown [Picea sitchensis]
gi|224284909|gb|ACN40184.1| unknown [Picea sitchensis]
gi|224285218|gb|ACN40335.1| unknown [Picea sitchensis]
gi|224285824|gb|ACN40626.1| unknown [Picea sitchensis]
Length = 289
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 139/264 (52%), Gaps = 39/264 (14%)
Query: 14 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 73
GKA+ L P N+ S R S SSG P DR + S + SYL G P
Sbjct: 31 GKALILPPYFNQSSESSRTSF--AVRSQASSGKPVKQGDRQLWFA--SKQSLSYLDGSLP 86
Query: 74 GDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA 127
GDYG+D GL DPE F + L E+I+ R+AMLGA+G + PE+L + G+ E
Sbjct: 87 GDYGFDPLGL-MDPEGPGGFIEPGWLAYGEIINGRYAMLGAVGAIAPEILGKLGLIPQET 145
Query: 128 V--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG-----AVEGYRIAGGP- 179
WF+ G I G DY +P ++ ++ LMG ++ YR G
Sbjct: 146 ALPWFRTGV-IPPAGTYDYWADP--------FTLFVLEMALMGFAEHRRLQDYRYPGSMS 196
Query: 180 ----------LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 228
LG +P YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ G+F+
Sbjct: 197 KQYFLGFEKYLGGSGNPSYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAIVGYFI 256
Query: 229 QAIVTGKGPLENLADHLADPVNNN 252
Q +VTG GP +NL DHLADPVNNN
Sbjct: 257 QGLVTGVGPFQNLLDHLADPVNNN 280
>gi|398313939|emb|CCI55396.1| PSI antenna protein Lhca1 [Marchantia polymorpha]
Length = 243
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 125/237 (52%), Gaps = 42/237 (17%)
Query: 22 SGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEP-PSYLTGEFPGDYGWDT 80
S + +SNG R+SM S W G+P P+YL G PGD+G+D
Sbjct: 32 SLSTVSNGSRVSM----------SSEW-----------MPGQPRPAYLDGSSPGDFGFDP 70
Query: 81 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 140
GL+ PE FA+ +E E+IHCRWAML G + PE L G W A + G
Sbjct: 71 LGLAEVPENFARYKESELIHCRWAMLAVPGVLIPEAL-------GLGNWVSAQQWAATPG 123
Query: 141 G-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP---LYPGGSFDPL 196
G YLGNP + ++ I A + + + VE R GE D YPGG FDPL
Sbjct: 124 GQATYLGNP--VPWGTLPIILAIEFLAVAFVEAKR------GEEPDHEKRKYPGGPFDPL 175
Query: 197 GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLADPVNNN 252
G A DP+ E K+KE+KNGRLA+ + GF VQAI G GPLENLA HL++P NN
Sbjct: 176 GFAKDPKKLEEYKLKELKNGRLALLAFLGFSVQAIAYPGTGPLENLASHLSNPWANN 232
>gi|192764705|gb|ACF05896.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764725|gb|ACF05906.1| chloroplast light-harvesting complex II protein [Populus tremula]
Length = 111
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/112 (72%), Positives = 88/112 (78%), Gaps = 4/112 (3%)
Query: 98 VIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 156
VIH RWAMLGALGC+ PE+L + V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 1 VIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSI 60
Query: 157 LAIWACQVVLMGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFA 206
LA+ QVVLMG VEG RI G P +GE D LYPGG FDPLGLADDP FA
Sbjct: 61 LAVLGFQVVLMGLVEGSRINGLPGVGEGND-LYPGGQYFDPLGLADDPATFA 111
>gi|168068370|ref|XP_001786045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662226|gb|EDQ49142.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 207
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 101/158 (63%), Gaps = 5/158 (3%)
Query: 97 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 155
E+IH RWA+L A G V P + G G EA+W+K GA + + Y G I +
Sbjct: 38 ELIHARWAILRAAGFVPPNAFNKFGSVCGPEAMWWKTGALLLEGDSIKYFGATVPI---N 94
Query: 156 ILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 214
+ A +V L+G E YR PLG D L+PGG+FDPLGLA DP+ FA LKVKEI
Sbjct: 95 LAAAVISEVNLVGGSEYYRSTNKSPLGSDLDRLHPGGAFDPLGLAKDPDQFALLKVKEIM 154
Query: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
NGRLAMFSM GFFV+A VTG+GP+ENLA HL+DP NN
Sbjct: 155 NGRLAMFSMLGFFVKAYVTGEGPVENLAAHLSDPFGNN 192
>gi|115769|sp|P12327.1|CB21_EUGGR RecName: Full=Chlorophyll a-b binding protein of LHCII type 1;
AltName: Full=Chlorophyll a-b binding protein of LHCII
type I; Short=CAB; Short=LHCP
gi|829262|emb|CAA29821.1| chlorophyll a/b protein (128 AA) [Euglena gracilis]
Length = 127
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 86/118 (72%), Gaps = 4/118 (3%)
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYR---IAGGPLGEVTDPLYPGGSFDPLGLADDPEAF 205
+LIHA+S+LAI A QV+LMGAVEGYR A G GE D LYPGG FDPLGLADDP+ F
Sbjct: 4 ALIHAKSLLAILATQVLLMGAVEGYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTF 63
Query: 206 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP-VNNNAWAYATNFVP 262
ELKVKEIKNGRLAM M GF+ QAIVTG+GP+EN HL DP +N A T F P
Sbjct: 64 PELKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTALVTQFAP 121
>gi|225690794|gb|ACO06083.1| chlorophyll a-b binding protein [Triticum aestivum]
Length = 252
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/259 (39%), Positives = 131/259 (50%), Gaps = 32/259 (12%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
MA+S+ S S VG LAPS +G T S V+ + W F
Sbjct: 3 MASSSGLRSCSAVGVPSLLAPSSLSGRSGLPFCAYATTSGRVTMSAEW-----------F 51
Query: 61 SGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
G+P P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML G + PE L
Sbjct: 52 PGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEAL-- 109
Query: 120 NGVKFGEAVWFKAGA-QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
G W KA +G YLGNP + ++ I A + + + E R
Sbjct: 110 -----GLGNWVKAQEWAALPDGQATYLGNP--VPWGNLPTILAIEFLAIAFAEQQRTM-- 160
Query: 179 PLGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTG 234
DP YPGG+FDPLG + DP F ELK+KEIKNGRLAM + GF V Q+ G
Sbjct: 161 ----EKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPG 216
Query: 235 KGPLENLADHLADPVNNNA 253
GPLEN HLADP +N +
Sbjct: 217 TGPLENPGTHLADPWHNTS 235
>gi|357124424|ref|XP_003563900.1| PREDICTED: chlorophyll a-b binding protein 1B-21,
chloroplastic-like [Brachypodium distachyon]
Length = 247
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 129/255 (50%), Gaps = 26/255 (10%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
MA+S+ S S VG LAPS +G T S V+ + W F
Sbjct: 3 MASSSGLRSCSAVGVPSLLAPSSRSGRSGLPFCAFATTSGRVTMSAEW-----------F 51
Query: 61 SGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
G+P P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML G + PE L
Sbjct: 52 PGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEAL-- 109
Query: 120 NGVKFGEAVWFKAGA-QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
G W KA +G Y G P + ++ I A + + + E R
Sbjct: 110 -----GLGNWVKAQEWAALPDGQATYFGVP--VPWGNLPTILAIEFLAIAFAEQQRTMEK 162
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGP 237
+ YPGG+FDPLG + DP F ELK+KEIKNGRLAM + GF V Q+ G GP
Sbjct: 163 ---DPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGP 219
Query: 238 LENLADHLADPVNNN 252
LENL HLADP +NN
Sbjct: 220 LENLGAHLADPWHNN 234
>gi|87313167|gb|ABD37880.1| light-harvesting chlorophyll-a/b binding protein Lhca3 [Mesostigma
viride]
Length = 300
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 119/214 (55%), Gaps = 39/214 (18%)
Query: 66 SYLTGEFPGDYGWDTAGLSA--------DPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
SYL G PGD+G+D GL DP+ A + EVIHCR+AMLG G V PE+L
Sbjct: 87 SYLDGSKPGDFGYDPLGLYKPEGAGGFIDPKWLAYS---EVIHCRYAMLGMAGMVAPEIL 143
Query: 118 ARNGVKFGEA--VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVE---- 171
+ G+ E VWFK G I SEG DY +P LA++ +VVLM E
Sbjct: 144 GKLGLIPAETGLVWFKTGV-IPSEGQYDYWASP--------LALFWIEVVLMQFAELRRW 194
Query: 172 -GYRIAGGP-----------LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRL 218
YR G G DP YPGG+ F+ LG D ++ +LK+KE+KNGRL
Sbjct: 195 QDYRHPGSQSKQYFLGLEQFFGGSGDPSYPGGAIFNFLGYGKDEKSMNDLKLKELKNGRL 254
Query: 219 AMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
AM + GFF+QA+ TG+GP +NL DHLADP NNN
Sbjct: 255 AMVATLGFFIQAMATGEGPFQNLTDHLADPFNNN 288
>gi|62733870|gb|AAX95979.1| chlorophyll a/b-binding protein CP26 precursor - maize [Oryza
sativa Japonica Group]
gi|77549543|gb|ABA92340.1| Chlorophyll A-B binding protein, expressed [Oryza sativa Japonica
Group]
Length = 225
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 111/222 (50%), Gaps = 73/222 (32%)
Query: 42 VSSGSP--------WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETF 90
V+S SP WYGPDR +L E P YL GE PGDYG+D GLS PE F
Sbjct: 51 VTSSSPDIGDELAKWYGPDRRIFLPEGLLDRSEVPDYLNGEVPGDYGYDPFGLSKKPEDF 110
Query: 91 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 150
+K + E L
Sbjct: 111 SKYQAYE----------------------------------------------------L 118
Query: 151 IHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKV 210
IHA+ W VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKV
Sbjct: 119 IHAR-----W---VVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAALLKV 168
Query: 211 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
KEIKNGRLAMFSM GFF+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 169 KEIKNGRLAMFSMLGFFIQAYVTGEGPVENLSKHLSDPFGNN 210
>gi|226503327|ref|NP_001148183.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|195612072|gb|ACG27866.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|195616508|gb|ACG30084.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|223975041|gb|ACN31708.1| unknown [Zea mays]
gi|413935743|gb|AFW70294.1| chlorophyll a-b binding protein 6A [Zea mays]
Length = 245
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 132/261 (50%), Gaps = 39/261 (14%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRIS---MRKTGSKSVSSGSPWYGPDRVKYL 57
MA+S+ S S VG LAPS S GR++ T S V+ + W
Sbjct: 3 MASSSGLRSCSAVGVPSLLAPS----SRSGRLAPFCANATTSGRVTMSAEW--------- 49
Query: 58 GPFSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
G+P P++L G PGD+G+D GL+ PE F + +E EV HCRWAML G + PE
Sbjct: 50 --MPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGILVPEA 107
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
L G W KA GG YLG P + ++ I + V + E R
Sbjct: 108 L-------GLGNWVKAQEWAAVPGGQATYLGAP--VPWGTLPTILVIEFVAIAFAEHQRT 158
Query: 176 AGGPLGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAI 231
DP YPGG+FDPLG + DP F E K+KEIKNGRLAM + GF V Q+
Sbjct: 159 ME------KDPEKKKYPGGAFDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQSA 212
Query: 232 VTGKGPLENLADHLADPVNNN 252
G GPLENLA HLADP +NN
Sbjct: 213 YPGTGPLENLASHLADPWHNN 233
>gi|145356594|ref|XP_001422513.1| putative CP26, photosystem II light harvesting complex
[Ostreococcus lucimarinus CCE9901]
gi|144582756|gb|ABP00830.1| putative CP26, photosystem II light harvesting complex
[Ostreococcus lucimarinus CCE9901]
Length = 324
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 117/222 (52%), Gaps = 29/222 (13%)
Query: 48 WYGPDRVKYL--GPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR YL G + + PSYL G GDYG+D GL AD + R EVIH RWA
Sbjct: 102 WYGPDRKLYLPGGLLTKADLPSYLDGTLAGDYGFDPLGLGAD-GAIKQYRVAEVIHARWA 160
Query: 105 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV 164
ML G V PE L G VW + G ++F +G G P + + A A QV
Sbjct: 161 MLAIPGVVIPEALGLPG-----GVWTETG-KVFLDG---ETGRPFFLENPIVFA--AVQV 209
Query: 165 VLMGAVEGYRIAG-GPLGEV-------------TDPLYPGGSFDPLGLADDPEAFAELKV 210
LM VE +R +G GP G V DP+ PGG D +A +P+ A LKV
Sbjct: 210 ALMAGVEQFRSSGEGPAGFVPFKGKFDESAFKGLDPINPGGPLDFFNVASNPQDLALLKV 269
Query: 211 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
KEIKNGRLAM +M G FVQ + TG+GP N H+ADP N
Sbjct: 270 KEIKNGRLAMIAMLGVFVQGLTTGEGPAANWGKHVADPFGYN 311
>gi|413935742|gb|AFW70293.1| LOW QUALITY PROTEIN: hypothetical protein ZEAMMB73_802965, partial
[Zea mays]
Length = 273
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 132/261 (50%), Gaps = 39/261 (14%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRIS---MRKTGSKSVSSGSPWYGPDRVKYL 57
MA+S+ S S VG LAPS S GR++ T S V+ + W
Sbjct: 3 MASSSGLRSCSAVGVPSLLAPS----SRSGRLAPFCANATTSGRVTMSAEW--------- 49
Query: 58 GPFSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
G+P P++L G PGD+G+D GL+ PE F + +E EV HCRWAML G + PE
Sbjct: 50 --MPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGILVPEA 107
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
L G W KA GG YLG P + ++ I + V + E R
Sbjct: 108 L-------GLGNWVKAQEWAAVPGGQATYLGAP--VPWGTLPTILVIEFVAIAFAEHQRT 158
Query: 176 AGGPLGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAI 231
DP YPGG+FDPLG + DP F E K+KEIKNGRLAM + GF V Q+
Sbjct: 159 ME------KDPEKKKYPGGAFDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQSA 212
Query: 232 VTGKGPLENLADHLADPVNNN 252
G GPLENLA HLADP +NN
Sbjct: 213 YPGTGPLENLASHLADPWHNN 233
>gi|145079550|tpg|DAA05918.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca3 [Mesostigma viride]
Length = 278
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 119/214 (55%), Gaps = 39/214 (18%)
Query: 66 SYLTGEFPGDYGWDTAGLSA--------DPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
SYL G PGD+G+D GL DP+ A + EVIHCR+AMLG G V PE+L
Sbjct: 65 SYLDGSKPGDFGYDPLGLYKPEGAGGFIDPKWLAYS---EVIHCRYAMLGMAGMVAPEIL 121
Query: 118 ARNGVKFGEA--VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVE---- 171
+ G+ E VWFK G I SEG DY +P LA++ +VVLM E
Sbjct: 122 GKLGLIPAETGLVWFKTGV-IPSEGQYDYWASP--------LALFWIEVVLMQFAELRRW 172
Query: 172 -GYRIAGGP-----------LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRL 218
YR G G DP YPGG+ F+ LG D ++ +LK+KE+KNGRL
Sbjct: 173 QDYRHPGSQSKQYFLGLEQFFGGSGDPSYPGGAIFNFLGYGKDEKSMNDLKLKELKNGRL 232
Query: 219 AMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
AM + GFF+QA+ TG+GP +NL DHLADP NNN
Sbjct: 233 AMVATLGFFIQAMATGEGPFQNLTDHLADPFNNN 266
>gi|169261110|gb|ACA52203.1| chloroplast photosystem II type I chlorophyll A/B-binding protein
[Oenothera elata subsp. hookeri]
Length = 103
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/102 (69%), Positives = 80/102 (78%), Gaps = 4/102 (3%)
Query: 4 STMALSSSFVGKAVNLAPSGNELS--NGGRISMRKTGSK--SVSSGSPWYGPDRVKYLGP 59
+T+ LSS+F GKAV P + + GR++MRK K + +S SPWYGPDRVKYLGP
Sbjct: 2 ATVTLSSTFTGKAVLSTPKERTAAGLDNGRVTMRKATPKKAAATSSSPWYGPDRVKYLGP 61
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 101
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH
Sbjct: 62 FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 103
>gi|115467828|ref|NP_001057513.1| Os06g0320500 [Oryza sativa Japonica Group]
gi|3789954|gb|AAC67558.1| chlorophyll a/b-binding protein precursor [Oryza sativa Japonica
Group]
gi|54290899|dbj|BAD61582.1| chlorophyll a/b-binding protein precursor [Oryza sativa Japonica
Group]
gi|113595553|dbj|BAF19427.1| Os06g0320500 [Oryza sativa Japonica Group]
gi|125597037|gb|EAZ36817.1| hypothetical protein OsJ_21156 [Oryza sativa Japonica Group]
gi|215686348|dbj|BAG87609.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704347|dbj|BAG93781.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 241
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 130/255 (50%), Gaps = 29/255 (11%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
MATS + S S VG LAPS N + + T S V+ + W
Sbjct: 1 MATSGLR-SCSAVGVPSLLAPSSNR--SRLPVCAYATTSGRVTMSAEW-----------M 46
Query: 61 SGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
G+P P++L G PGD+G+D GL+ PE F + +E EV HCRWAML G + PE L
Sbjct: 47 PGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEAL-- 104
Query: 120 NGVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
G W +A GG YLGNP + ++ I + V + E R
Sbjct: 105 -----GLGNWVQAQEWAAEPGGQATYLGNP--VPWGTLPTILVIEFVAIAFAEHQRTME- 156
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGP 237
+ YPGG+FDPLG + DP F E K+KEIKNGRLAM + GF V Q+ G GP
Sbjct: 157 --KDPEKKKYPGGAFDPLGFSKDPVKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGP 214
Query: 238 LENLADHLADPVNNN 252
LENLA HL+DP +NN
Sbjct: 215 LENLASHLSDPWHNN 229
>gi|154357502|gb|ABS78775.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357504|gb|ABS78776.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357506|gb|ABS78777.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357508|gb|ABS78778.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357510|gb|ABS78779.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357512|gb|ABS78780.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357514|gb|ABS78781.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357516|gb|ABS78782.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357518|gb|ABS78783.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357520|gb|ABS78784.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357522|gb|ABS78785.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357524|gb|ABS78786.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357526|gb|ABS78787.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357528|gb|ABS78788.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357530|gb|ABS78789.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357532|gb|ABS78790.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357534|gb|ABS78791.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357536|gb|ABS78792.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357538|gb|ABS78793.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357540|gb|ABS78794.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357542|gb|ABS78795.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357544|gb|ABS78796.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357546|gb|ABS78797.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357548|gb|ABS78798.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357550|gb|ABS78799.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357552|gb|ABS78800.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357554|gb|ABS78801.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357556|gb|ABS78802.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357558|gb|ABS78803.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357562|gb|ABS78805.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357566|gb|ABS78807.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357568|gb|ABS78808.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357572|gb|ABS78810.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357574|gb|ABS78811.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 100/153 (65%), Gaps = 6/153 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+IH RWAMLGA G + PE L + G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+ +VVL+G E YRI G + D L+PGG FDPLGLA DPE A LKVKE
Sbjct: 62 LVLAVV---AEVVLLGGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 245
IKNGRLAMF+M GFF+QA VTG+GP+ENLA HL
Sbjct: 117 IKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHL 149
>gi|297820242|ref|XP_002878004.1| hypothetical protein ARALYDRAFT_485905 [Arabidopsis lyrata subsp.
lyrata]
gi|297323842|gb|EFH54263.1| hypothetical protein ARALYDRAFT_485905 [Arabidopsis lyrata subsp.
lyrata]
Length = 241
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 111/197 (56%), Gaps = 21/197 (10%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
GEP P+YL G PGD+G+D GL PE + +E E+IHCRWAML G + PE L
Sbjct: 51 GEPRPAYLDGSAPGDFGFDPLGLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL--- 107
Query: 121 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W KA GG YLGNP + ++ I A + + + VE R
Sbjct: 108 ----GYGNWVKAQEWAAVPGGQATYLGNP--VPWGTLPTILAIEFLAIAFVEHQR----- 156
Query: 180 LGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGK 235
DP YPGG+FDPLG + DP+ ELKVKEIKNGRLA+ + GF V Q+ G
Sbjct: 157 -SMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGT 215
Query: 236 GPLENLADHLADPVNNN 252
GPLENLA HLADP +NN
Sbjct: 216 GPLENLATHLADPWHNN 232
>gi|312282193|dbj|BAJ33962.1| unnamed protein product [Thellungiella halophila]
Length = 241
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 111/197 (56%), Gaps = 21/197 (10%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
GEP P+YL G PGD+G+D GL PE + +E E+IHCRWAML G + PE L
Sbjct: 51 GEPRPAYLDGSAPGDFGFDPLGLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL--- 107
Query: 121 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W KA GG YLGNP + ++ I A + + + VE R
Sbjct: 108 ----GYGNWVKAQEWAALPGGQATYLGNP--VPWGTLPTILAIEFLAIAFVEHQR----- 156
Query: 180 LGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGK 235
DP YPGG+FDPLG + DP+ F ELKVKEIKNGRLA+ + GF V Q+ G
Sbjct: 157 -SMEKDPEKKKYPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGT 215
Query: 236 GPLENLADHLADPVNNN 252
GPLENLA HLADP + N
Sbjct: 216 GPLENLATHLADPWHKN 232
>gi|407971012|ref|NP_001234032.1| chlorophyll a-b binding protein 6A, chloroplastic [Solanum
lycopersicum]
gi|115764|sp|P12360.1|CB11_SOLLC RecName: Full=Chlorophyll a-b binding protein 6A, chloroplastic;
AltName: Full=LHCI type I CAB-6A; AltName:
Full=Light-harvesting complex I 26 kDa protein; Flags:
Precursor
gi|170494|gb|AAA34186.1| chlorophyll a/b binding protein precursor [Solanum lycopersicum]
Length = 246
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 110/194 (56%), Gaps = 15/194 (7%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P PSYL G PGD+G+D+ GL P + +E E+IHCRWAML G + PE L
Sbjct: 52 GQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL--- 108
Query: 121 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W KA GG YLG P + ++ I A + + + VE R
Sbjct: 109 ----GLGNWVKAQEWAAIPGGQATYLGQP--VPWGTLPTILAIEFLAIAFVEHQRSMEK- 161
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPL 238
+ YPGG+FDPLG + DP F ELKVKEIKNGRLA+ ++ GF V Q+ G GPL
Sbjct: 162 --DSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPL 219
Query: 239 ENLADHLADPVNNN 252
ENLA HLADP +NN
Sbjct: 220 ENLATHLADPWHNN 233
>gi|157837283|gb|ABV82714.1| chloroplast chlorophyll a/b binding protein precursor
[Phyllostachys edulis]
Length = 246
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/255 (39%), Positives = 127/255 (49%), Gaps = 26/255 (10%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
MA+S+ S S VG LAPS +G T S V+ + W F
Sbjct: 3 MASSSGLRSCSAVGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAEW-----------F 51
Query: 61 SGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
G+P P++L G PGD+G+D GL PE F + +E EV HCRWAML G + PE L
Sbjct: 52 PGQPRPAHLDGSSPGDFGFDPLGLGTVPENFERFKESEVYHCRWAMLCVPGVLVPEAL-- 109
Query: 120 NGVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
G W KA GG Y G P + ++ I A + + + E R
Sbjct: 110 -----GLGNWVKAQEWAAVPGGQATYFGVP--VPWGNLPTILAIEFLAIAFAEHQRTME- 161
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGP 237
+ YPGG+FDPLG + DP E K+KEIKNGRLAM + GF V Q+ G GP
Sbjct: 162 --KDPEKKKYPGGAFDPLGFSKDPVKLEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGP 219
Query: 238 LENLADHLADPVNNN 252
LENLA HLADP +NN
Sbjct: 220 LENLASHLADPWHNN 234
>gi|154357564|gb|ABS78806.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 99/153 (64%), Gaps = 6/153 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+IH RWAMLGA G + PE L + G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+ +VVL+G E YRI G + D L+PGG FDPLGLA DPE A LKVKE
Sbjct: 62 LVLAVV---AEVVLLGGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 245
IKNGRLAMF M GFF+QA VTG+GP+ENLA HL
Sbjct: 117 IKNGRLAMFGMLGFFIQAYVTGEGPVENLAKHL 149
>gi|154357570|gb|ABS78809.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 99/153 (64%), Gaps = 6/153 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+IH RWAMLGA G + PE L + G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+ +VVL+G E YRI G + D L+PGG FDPLGLA DPE A LKVKE
Sbjct: 62 LVLAVV---AEVVLLGGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 245
IKNGRLAMF M GFF+QA VTG+GP+ENLA HL
Sbjct: 117 IKNGRLAMFXMLGFFIQAYVTGEGPVENLAKHL 149
>gi|169261112|gb|ACA52204.1| chloroplast photosystem II type I chlorophyll A/B-binding protein
[Oenothera grandiflora]
Length = 103
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/104 (70%), Positives = 80/104 (76%), Gaps = 8/104 (7%)
Query: 4 STMALSSSFVGKAVNLAPSGNELS----NGGRISMRKTGSK--SVSSGSPWYGPDRVKYL 57
+T+ LSS+F GKAV P EL GR++MRK K + +S SPWYGPDRVKYL
Sbjct: 2 ATVTLSSTFTGKAVLSTP--KELKAAGLGNGRVTMRKATPKKAAATSSSPWYGPDRVKYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 101
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH
Sbjct: 60 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 103
>gi|413946552|gb|AFW79201.1| light harvesting complex mesophyll7 [Zea mays]
Length = 244
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/105 (74%), Positives = 86/105 (81%), Gaps = 6/105 (5%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVS---SGSPWYGPDRVKY 56
MA+STMALSS+ F GKAVN+ PS + R++MRKT +K+ SGSPWYGPDRV Y
Sbjct: 1 MASSTMALSSTAFAGKAVNV-PSSSAFGEA-RVTMRKTAAKAKPAAASGSPWYGPDRVLY 58
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 101
LGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH
Sbjct: 59 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 103
>gi|125555124|gb|EAZ00730.1| hypothetical protein OsI_22755 [Oryza sativa Indica Group]
Length = 241
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/255 (39%), Positives = 129/255 (50%), Gaps = 29/255 (11%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
MATS + S S VG LAPS N + + T S V+ + W
Sbjct: 1 MATSGLR-SCSAVGVPSLLAPSSNR--SRLPVCAYATTSGRVTMSAEW-----------M 46
Query: 61 SGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
G+P P++L G PGD+G+D GL+ PE F + +E EV HCRWAML G + PE L
Sbjct: 47 PGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEAL-- 104
Query: 120 NGVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
G W +A GG YLGNP + ++ I + V + E R
Sbjct: 105 -----GLGNWVQAQEWAAEPGGQATYLGNP--VPWGTLPTILVIEFVAIAFAEHQRTME- 156
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGP 237
+ YPGG+FDPLG + DP F E K+KEIKNGRLAM + F V Q+ G GP
Sbjct: 157 --KDPEKKKYPGGAFDPLGFSKDPVKFEEYKLKEIKNGRLAMLAFVAFCVQQSAYPGTGP 214
Query: 238 LENLADHLADPVNNN 252
LENLA HL+DP +NN
Sbjct: 215 LENLASHLSDPWHNN 229
>gi|297740654|emb|CBI30836.3| unnamed protein product [Vitis vinifera]
Length = 110
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/103 (70%), Positives = 75/103 (72%), Gaps = 27/103 (26%)
Query: 162 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 221
+V+LMGAVEGYRIAGGPLGEV KEIKNGRLAMF
Sbjct: 35 SEVILMGAVEGYRIAGGPLGEV---------------------------KEIKNGRLAMF 67
Query: 222 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 68 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 110
>gi|255076759|ref|XP_002502049.1| chlorophyll a/b-binding protein [Micromonas sp. RCC299]
gi|226517314|gb|ACO63307.1| chlorophyll a/b-binding protein [Micromonas sp. RCC299]
Length = 393
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 126/227 (55%), Gaps = 14/227 (6%)
Query: 31 RISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEP-PSYLTGEFPGDYGWDTAGL-SADPE 88
R + + + + ++ YGP R K+L G P P +L G GD G+D GL S P
Sbjct: 158 RARVERERAAARATMPAHYGPTRRKFLPDGFGYPFPEHLDGTLCGDAGFDPLGLASGSPG 217
Query: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFS--EGGLDYL 145
+ RELE++H RWAMLG +G PE LAR G++ GE VW+K GA + + LDYL
Sbjct: 218 DLDRYRELELLHGRWAMLGVVGAAVPEALARFGGLELGEPVWWKVGAAKLNSPDLALDYL 277
Query: 146 GNPSLIHAQS--ILAIWACQVVLMGAVEGYRIAG----GPLGEVT--DPLYPGGS-FDPL 196
G A S + I ACQ+VLMG E R G P+G D YPGG+ FDP
Sbjct: 278 GLGGFHIAGSSGLAVIAACQLVLMGGPEYARKVGIDSLVPVGVYLPGDRDYPGGAPFDPF 337
Query: 197 GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 243
G++ D F KV E+K+GRLAM +M G F QA TG GP+ENL +
Sbjct: 338 GVSADAAVFERQKVAEMKHGRLAMVAMLGCFAQAWATGVGPVENLTE 384
>gi|170388|gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
gi|225895|prf||1402358A photosystem I protein CAB
Length = 246
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 108/194 (55%), Gaps = 15/194 (7%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P PSYL G PGD+G+D GL P + +E E+IHCRWAML G + PE L
Sbjct: 52 GQPRPSYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL--- 108
Query: 121 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W KA GG YLG P + ++ I A + + + VE R
Sbjct: 109 ----GLGNWVKAQEWAAIPGGQATYLGQP--VPWGTLPTILAIEFLAIAFVEHQRSMEK- 161
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPL 238
+ YPGG+FDPLG + DP F ELKVKEIKNGRLA+ + GF V Q+ G GPL
Sbjct: 162 --DSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPL 219
Query: 239 ENLADHLADPVNNN 252
ENLA HLADP +NN
Sbjct: 220 ENLATHLADPWHNN 233
>gi|154357500|gb|ABS78774.1| At4g10340-like protein [Arabidopsis halleri subsp. halleri]
Length = 149
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 100/153 (65%), Gaps = 6/153 (3%)
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIH 152
+ E+IH RWAMLGA G + PE L + G K G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGFIIPEALNKYGAKCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 153 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 212
+ +VVL+G E YRI + D L+PGG FDPLGLA DP+ A LKVKE
Sbjct: 62 LVLAVV---AEVVLLGGAEYYRITNEL--DFEDKLHPGGPFDPLGLAKDPDQGALLKVKE 116
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 245
IKNGRLAMF+M GFF+QA VTG+GP+ENLA HL
Sbjct: 117 IKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHL 149
>gi|6440899|dbj|BAA78594.1| hypothetical protein [Chlamydomonas sp. HS-5]
Length = 155
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/113 (66%), Positives = 84/113 (74%), Gaps = 6/113 (5%)
Query: 35 RKTGSKSVS--SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 92
+KT SK S +G+ WYGPDR K+LGPF PSYLTGEFPGDYGWDTAGLSA + K
Sbjct: 47 KKTVSKKPSGPAGAEWYGPDRPKWLGPFFQNTPSYLTGEFPGDYGWDTAGLSATGD-LRK 105
Query: 93 NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYL 145
R +EVIH RW MLGALGC+ PEL+ + E VWFKAGAQIFSEGGLDYL
Sbjct: 106 YRTIEVIHGRWPMLGALGCLVPELIKGD---IAEPVWFKAGAQIFSEGGLDYL 155
>gi|226358407|gb|ACO51066.1| chloroplast chlorophyll A-B binding protein [Gossypium hirsutum]
Length = 240
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 48 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGPDR +L E P YL GE PGDYG+D GLS PE FAK + E+IH RWA
Sbjct: 73 WYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWA 132
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + L+Y G I+ + +
Sbjct: 133 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVVAV---VAE 189
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNG 216
VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNG
Sbjct: 190 VVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNG 240
>gi|13265501|gb|AAG40043.2|AF324692_1 AT3g54890 [Arabidopsis thaliana]
Length = 241
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 110/197 (55%), Gaps = 21/197 (10%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
GEP P+YL G PGD+G+D GL P + +E E+IHCRWAML G + PE L
Sbjct: 51 GEPRPAYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEAL--- 107
Query: 121 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W KA GG YLGNP + ++ I A + + + VE R
Sbjct: 108 ----GYGNWVKAQEWAALPGGQATYLGNP--VPWGTLPTILAIEFLAIAFVEHQR----- 156
Query: 180 LGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGK 235
DP YPGG+FDPLG + DP+ ELKVKEIKNGRLA+ + GF V Q+ G
Sbjct: 157 -SMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGT 215
Query: 236 GPLENLADHLADPVNNN 252
GPLENLA HLADP +NN
Sbjct: 216 GPLENLATHLADPWHNN 232
>gi|15233115|ref|NP_191049.1| light-harvesting complex I chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
gi|75220543|sp|Q01667.1|CAB6_ARATH RecName: Full=Chlorophyll a-b binding protein 6, chloroplastic;
AltName: Full=LHCI-730; AltName: Full=LHCII type III
CAB-6; AltName: Full=Light-harvesting complex protein
Lhca1; Flags: Precursor
gi|268612158|pdb|2WSC|1 Chain 1, Improved Model Of Plant Photosystem I
gi|268612176|pdb|2WSE|1 Chain 1, Improved Model Of Plant Photosystem I
gi|268612194|pdb|2WSF|1 Chain 1, Improved Model Of Plant Photosystem I
gi|11762180|gb|AAG40368.1|AF325016_1 AT3g54890 [Arabidopsis thaliana]
gi|11908038|gb|AAG41448.1|AF326866_1 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|12642856|gb|AAK00370.1|AF339688_1 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|13605732|gb|AAK32859.1|AF361847_1 AT3g54890/F28P10_130 [Arabidopsis thaliana]
gi|16207|emb|CAA39534.1| chlorophyll A/B-binding protein [Arabidopsis thaliana]
gi|166644|gb|AAA32759.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|4678304|emb|CAB41095.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|17979245|gb|AAL49939.1| AT3g54890/F28P10_130 [Arabidopsis thaliana]
gi|20453135|gb|AAM19809.1| AT3g54890/F28P10_130 [Arabidopsis thaliana]
gi|23507771|gb|AAN38689.1| At3g54890/F28P10_130 [Arabidopsis thaliana]
gi|332645785|gb|AEE79306.1| light-harvesting complex I chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
Length = 241
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 110/197 (55%), Gaps = 21/197 (10%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
GEP P+YL G PGD+G+D GL P + +E E+IHCRWAML G + PE L
Sbjct: 51 GEPRPAYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEAL--- 107
Query: 121 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W KA GG YLGNP + ++ I A + + + VE R
Sbjct: 108 ----GYGNWVKAQEWAALPGGQATYLGNP--VPWGTLPTILAIEFLAIAFVEHQR----- 156
Query: 180 LGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGK 235
DP YPGG+FDPLG + DP+ ELKVKEIKNGRLA+ + GF V Q+ G
Sbjct: 157 -SMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGT 215
Query: 236 GPLENLADHLADPVNNN 252
GPLENLA HLADP +NN
Sbjct: 216 GPLENLATHLADPWHNN 232
>gi|255547714|ref|XP_002514914.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223545965|gb|EEF47468.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 270
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 127/242 (52%), Gaps = 40/242 (16%)
Query: 28 NGGRISMRKTGSKSVSSGSPWY----GPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAG 82
+G R+++RK S V+S S PDR + F G PP +L G PGD+G+D G
Sbjct: 36 SGKRLTVRKHTSPVVASRSVTVCAVADPDRPLW---FPGSTPPPWLDGSLPGDFGFDPLG 92
Query: 83 LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGL 142
L +DPET N + E++HCRWAMLGA G PE L + G+ W+ AG L
Sbjct: 93 LGSDPETLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGI-LNTPSWYDAGK-------L 144
Query: 143 DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPL------------Y 188
+Y + + ++ +++ +G EG R A P TDP+ Y
Sbjct: 145 EYFTDTT--------TLFIIELIFIGWAEGRRWADILKPGCVNTDPIFPNNRLTGTDVGY 196
Query: 189 PGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 246
PGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLA
Sbjct: 197 PGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLA 256
Query: 247 DP 248
DP
Sbjct: 257 DP 258
>gi|293337343|gb|ADE42967.1| type III chlorophyll a/b binding protein [Gardenia jasminoides]
Length = 274
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/284 (38%), Positives = 146/284 (51%), Gaps = 50/284 (17%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-----SGSP--WYGPDR 53
MAT + SSS A GGR S + + S+ VS +P G DR
Sbjct: 1 MATQALVSSSSITASA-----EAARQILGGR-SFQSSSSRKVSFAVRAEATPPAKQGADR 54
Query: 54 VKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLG 107
+ S + SYL G PGDYG+D GLS DPE F + L E+I+ R+AMLG
Sbjct: 55 QLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPSWLAYGEIINGRYAMLG 111
Query: 108 ALGCVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 165
A+G + PE+L + G+ E WFK G I G DY +P ++ ++
Sbjct: 112 AVGAIAPEILGKAGLIPPETALPWFKTGV-IPPAGTYDYWADP--------YTLFVFELA 162
Query: 166 LMGAVEGYRIAG----GPLGEVT------------DPLYPGGS-FDPLGLADDPEAFAEL 208
LMG E R G L + +P+YPGG F+PLG D ++ +L
Sbjct: 163 LMGFAEHRRFQDFQKPGCLSKQYFLGFEKYFEGSGNPIYPGGPLFNPLGFGKDEKSLKDL 222
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
K+KE+KNGRLAM ++ G+FVQA+VTG GP +NL DHL+DPVNNN
Sbjct: 223 KLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLSDPVNNN 266
>gi|116779438|gb|ABK21282.1| unknown [Picea sitchensis]
gi|116782291|gb|ABK22450.1| unknown [Picea sitchensis]
gi|116784092|gb|ABK23211.1| unknown [Picea sitchensis]
gi|116786476|gb|ABK24121.1| unknown [Picea sitchensis]
gi|116791795|gb|ABK26112.1| unknown [Picea sitchensis]
gi|116791985|gb|ABK26188.1| unknown [Picea sitchensis]
gi|116792462|gb|ABK26376.1| unknown [Picea sitchensis]
gi|148908663|gb|ABR17439.1| unknown [Picea sitchensis]
gi|224284338|gb|ACN39904.1| unknown [Picea sitchensis]
gi|224284452|gb|ACN39960.1| unknown [Picea sitchensis]
gi|224284659|gb|ACN40062.1| unknown [Picea sitchensis]
gi|224284741|gb|ACN40101.1| unknown [Picea sitchensis]
gi|224285484|gb|ACN40463.1| unknown [Picea sitchensis]
Length = 278
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 130/258 (50%), Gaps = 45/258 (17%)
Query: 7 ALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPS 66
A +S VG+AV+L S + + + S++V + P + P PP
Sbjct: 38 AKASFLVGRAVSLRQSKAAMPRRAAVIV----SEAVQTERPLWFPGTT---------PPP 84
Query: 67 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 126
+L G P D+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+
Sbjct: 85 WLDGSLPADFGFDPLGLGSDPETLKWNVQSELVHCRWAMLGAAGIFIPELLTKLGI-LNT 143
Query: 127 AVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVT 184
W+ AG Q +Y + + ++ +++ +G EG R A P T
Sbjct: 144 PSWYTAGEQ-------EYFTDKT--------TLFVVEMIFLGWAEGRRWADIIKPGSVNT 188
Query: 185 DPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
DP+ YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA
Sbjct: 189 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQA 248
Query: 231 IVTGKGPLENLADHLADP 248
TG GP++NL HLADP
Sbjct: 249 EYTGTGPIDNLLAHLADP 266
>gi|149242540|pdb|2O01|1 Chain 1, The Structure Of A Plant Photosystem I Supercomplex At 3.4
Angstrom Resolution
Length = 187
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 110/197 (55%), Gaps = 21/197 (10%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
GEP P+YL G PGD+G+D GL P + +E E+IHCRWAML G + PE L
Sbjct: 3 GEPRPAYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEAL--- 59
Query: 121 GVKFGEAVWFKAGAQIFSEGGL-DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W KA GG YLGNP + ++ I A + + + VE R
Sbjct: 60 ----GYGNWVKAQEWAALPGGQATYLGNP--VPWGTLPTILAIEFLAIAFVEHQR----- 108
Query: 180 LGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGK 235
DP YPGG+FDPLG + DP+ ELKVKEIKNGRLA+ + GF V Q+ G
Sbjct: 109 -SMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGT 167
Query: 236 GPLENLADHLADPVNNN 252
GPLENLA HLADP +NN
Sbjct: 168 GPLENLATHLADPWHNN 184
>gi|356559472|ref|XP_003548023.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Glycine max]
Length = 246
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 109/197 (55%), Gaps = 21/197 (10%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 53 GQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEAL--- 109
Query: 121 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W KA GG YLGNP + ++ I A + + + VE R
Sbjct: 110 ----GLGNWVKAQEWAAVPGGQATYLGNP--VPWGTLPTILAIEFLAISFVEHQR----- 158
Query: 180 LGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGK 235
DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G
Sbjct: 159 -SMEKDPEKKKYPGGAFDPLGYSKDPKTFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGT 217
Query: 236 GPLENLADHLADPVNNN 252
GPLENLA HLADP +NN
Sbjct: 218 GPLENLAAHLADPWHNN 234
>gi|224100797|ref|XP_002312019.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
gi|222851839|gb|EEE89386.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
Length = 244
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 109/199 (54%), Gaps = 21/199 (10%)
Query: 60 FSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
G+P P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 49 LPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILIPEAL- 107
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGL-DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
G W KA + GG YLG P + ++ + A + V + VE R
Sbjct: 108 ------GLGNWVKAQEWAAAPGGQATYLGQP--VPWGTLPTVLAIEFVAIAFVEHQR--- 156
Query: 178 GPLGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVT 233
DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+
Sbjct: 157 ---SMEKDPEKKKYPGGAFDPLGFSKDPKKFEEYKVKEIKNGRLALLAFVGFCVQQSAYP 213
Query: 234 GKGPLENLADHLADPVNNN 252
G GPLENLA HLADP +NN
Sbjct: 214 GTGPLENLATHLADPWHNN 232
>gi|388521809|gb|AFK48966.1| unknown [Lotus japonicus]
Length = 241
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 109/197 (55%), Gaps = 21/197 (10%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 51 GQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEAL--- 107
Query: 121 GVKFGEAVWFKAGAQIFSEGGL-DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W KA GG YLGNP + ++ + A + + + VE R
Sbjct: 108 ----GLGNWVKAQEWAALPGGQATYLGNP--VPRGTLPTVLAIEFLAISFVEHQR----- 156
Query: 180 LGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGK 235
DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G
Sbjct: 157 -SMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGT 215
Query: 236 GPLENLADHLADPVNNN 252
GPLENLA HLADP +NN
Sbjct: 216 GPLENLATHLADPWHNN 232
>gi|115765|sp|P10708.1|CB12_SOLLC RecName: Full=Chlorophyll a-b binding protein 7, chloroplastic;
AltName: Full=LHCI type II CAB-7; Flags: Precursor
gi|19180|emb|CAA32197.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
gi|170431|gb|AAA34159.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
gi|226546|prf||1601518A chlorophyll a/b binding protein II
Length = 270
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 117/215 (54%), Gaps = 36/215 (16%)
Query: 51 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 109
PDR + F G PP +L G PGD+G+D GL++DPE+ N++ E++HCRWAMLGA
Sbjct: 63 PDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 119
Query: 110 GCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
G PELL + G+ W+ AG Q +Y + + ++ ++VL+G
Sbjct: 120 GIFIPELLTKIGI-LNTPSWYTAGEQ-------EYFTDTT--------TLFIVELVLIGW 163
Query: 170 VEGYRIAG--GPLGEVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEI 213
EG R A P TDP+ YPGG FDPLG P EL+ KEI
Sbjct: 164 AEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEI 223
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
KNGRLAM ++ G + Q I TG GP++NL HLADP
Sbjct: 224 KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
>gi|18376587|emb|CAC81065.1| putative chlorophyll A-B binding protein of LHCI type II precursor
[Picea abies]
Length = 278
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 130/258 (50%), Gaps = 45/258 (17%)
Query: 7 ALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPS 66
A +S VG+AV+L S + + + S++V + P + P PP
Sbjct: 38 AKASFLVGRAVSLRQSKAAMPRRAAVIV----SEAVQTERPLWFPGTT---------PPP 84
Query: 67 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 126
+L G P D+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+
Sbjct: 85 WLDGSLPADFGFDPLGLGSDPETLKWNVQSELVHCRWAMLGAAGIFIPELLTKLGI-LNT 143
Query: 127 AVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVT 184
W+ AG L+Y + + ++ +++ +G EG R A P T
Sbjct: 144 PSWYTAGE-------LEYFTDKT--------TLFVVEMIFLGWAEGRRWADIIKPGSVNT 188
Query: 185 DPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
DP+ YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA
Sbjct: 189 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQA 248
Query: 231 IVTGKGPLENLADHLADP 248
TG GP++NL HLADP
Sbjct: 249 EYTGTGPIDNLLAHLADP 266
>gi|215740823|dbj|BAG96979.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 159
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/149 (55%), Positives = 100/149 (67%), Gaps = 6/149 (4%)
Query: 105 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
MLGA G + PE + G G EAVWFK GA + L+Y GN I+ ++ A +
Sbjct: 1 MLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIVAVAAE 57
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
VVL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM
Sbjct: 58 VVLVGGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSM 115
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
GFF+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 116 LGFFIQAYVTGEGPVENLSKHLSDPFGNN 144
>gi|493723|emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-binding protein
[Nicotiana tabacum]
Length = 245
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 109/197 (55%), Gaps = 21/197 (10%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P P YL G PGD+G+D GL P + +E E+IHCRWAML G + PE L
Sbjct: 52 GQPRPPYLDGSAPGDFGFDPLGLGEVPSNLERYKESELIHCRWAMLAVPGILVPEAL--- 108
Query: 121 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W KA GG YLG P + ++ I A + + + VE R
Sbjct: 109 ----GLGNWVKAQEWAAIPGGQATYLGQP--VPWGTLPTILAIEFLAIAFVEHQR----- 157
Query: 180 LGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGK 235
DP YPGG+FDPLG + DP+ F ELKVKEIKNGRLA+ + GF V Q+ G
Sbjct: 158 -SMEKDPEKKKYPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGT 216
Query: 236 GPLENLADHLADPVNNN 252
GPLENLA HLADP +NN
Sbjct: 217 GPLENLATHLADPWHNN 233
>gi|225425420|ref|XP_002277906.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic [Vitis
vinifera]
gi|297738455|emb|CBI27656.3| unnamed protein product [Vitis vinifera]
Length = 271
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 137/269 (50%), Gaps = 43/269 (15%)
Query: 2 ATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRK-----TGSKSVSSGSPWYGPDRVKY 56
A +T++ SS G V + G R+S++K G++S + + P+R +
Sbjct: 12 AVATISPSSQKTGSVVGATKA--SFLGGKRLSLKKFTAPAAGTRSFTVSAAAADPNRPLW 69
Query: 57 LGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
F G PP +L G PGD+G+D GL +DPET + E++HCRWAMLGA G PE
Sbjct: 70 ---FPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLKWMVQSEIVHCRWAMLGAAGIFIPE 126
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 175
L + G+ W+ AG L+Y + + ++ +++ +G EG R
Sbjct: 127 FLTKIGI-LNTPSWYTAGE-------LEYFTDKT--------TLFIVEMIFIGWAEGRRW 170
Query: 176 AG--GPLGEVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLA 219
A P TDP+ YPGG FDPLG P+ EL+ KEIKNGRLA
Sbjct: 171 ADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPDKIKELRTKEIKNGRLA 230
Query: 220 MFSMFGFFVQAIVTGKGPLENLADHLADP 248
M ++ G + QAI TG GP++NL HLADP
Sbjct: 231 MLAVMGAWFQAIYTGTGPIDNLFAHLADP 259
>gi|388491152|gb|AFK33642.1| unknown [Lotus japonicus]
Length = 241
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 109/197 (55%), Gaps = 21/197 (10%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 51 GQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEAL--- 107
Query: 121 GVKFGEAVWFKAGAQIFSEGGL-DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W KA GG YLGNP + ++ + A + + + VE R
Sbjct: 108 ----GLGNWVKAQEWAALPGGQATYLGNP--VPWGTLPTVLAIEFLAISFVEHQR----- 156
Query: 180 LGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGK 235
DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G
Sbjct: 157 -SMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGT 215
Query: 236 GPLENLADHLADPVNNN 252
GPLENLA HLADP +NN
Sbjct: 216 GPLENLATHLADPWHNN 232
>gi|224109746|ref|XP_002315298.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
gi|118489209|gb|ABK96411.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222864338|gb|EEF01469.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
Length = 243
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 106/194 (54%), Gaps = 15/194 (7%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 50 GQPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL--- 106
Query: 121 GVKFGEAVWFKAGAQIFSEGGL-DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W KA + GG YLG P + ++ I A + V + VE R
Sbjct: 107 ----GLGNWVKAQEWAATPGGQATYLGQP--VPWGTLPIILAIEFVAIAFVEHQRSMEK- 159
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPL 238
+ YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + G VQ G GPL
Sbjct: 160 --DTEKKKYPGGAFDPLGYSKDPQKFEEYKVKEIKNGRLALLAFVGICVQQTAYPGTGPL 217
Query: 239 ENLADHLADPVNNN 252
ENLA HLADP +NN
Sbjct: 218 ENLATHLADPWHNN 231
>gi|449452104|ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Cucumis sativus]
gi|449525097|ref|XP_004169556.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Cucumis sativus]
Length = 246
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 107/197 (54%), Gaps = 21/197 (10%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P P YL G PGD+G+D GL PE + +E E+IHCRWAML G + PE L
Sbjct: 53 GQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEAL--- 109
Query: 121 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W KA GG YLG P + ++ I + + + VE R
Sbjct: 110 ----GLGNWVKAQEWAAVPGGQATYLGQP--VPWGTLPTILVIEFLAIAFVEHQR----- 158
Query: 180 LGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGK 235
DP YPGG+FDPLG + DPE E KVKEIKNGRLA+ + GF V Q+ G
Sbjct: 159 -SMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGT 217
Query: 236 GPLENLADHLADPVNNN 252
GPLENLA HLADP +NN
Sbjct: 218 GPLENLATHLADPWHNN 234
>gi|388515647|gb|AFK45885.1| unknown [Lotus japonicus]
Length = 269
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 121/228 (53%), Gaps = 36/228 (15%)
Query: 38 GSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
G++S ++ PDR + F G PP +L G PGD+G+D GLS+DPE+ N +
Sbjct: 49 GARSTTTVCAAAEPDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNVQA 105
Query: 97 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 156
E++HCRWAMLGA G PE L + G+ W+ AG Q +Y + +
Sbjct: 106 ELVHCRWAMLGAAGIFIPEFLTKIGI-LNTPSWYTAGEQ-------EYFTDTT------- 150
Query: 157 LAIWACQVVLMGAVEGYRIAG--GPLGEVTDPL------------YPGGS-FDPLGLAD- 200
++ +++ +G EG R A P TDP+ YPGG FDPLG
Sbjct: 151 -TLFIVELIFIGWAEGRRWADILKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSG 209
Query: 201 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
P+ EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP
Sbjct: 210 SPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 257
>gi|164612849|gb|ABY63668.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 262
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 124/234 (52%), Gaps = 25/234 (10%)
Query: 30 GRISMRKTGSK---SVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSA 85
GR +R+ ++ +VS+ +P DR + F G PP +L G PGD+G+D GL +
Sbjct: 35 GRTKLREAAARPSFAVSAAAP----DRPIW---FPGSVPPPWLDGSLPGDFGFDPFGLGS 87
Query: 86 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYL 145
DPE+ N + E++HCRWAMLGA G PE L + G+ W+ AG Q + +
Sbjct: 88 DPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGI-LSTPSWYTAGEQQY------FT 140
Query: 146 GNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLA 199
+L + IL WA ++ G V I TD YPGG FDPLG
Sbjct: 141 DTTTLFIIELILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 200
Query: 200 D-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL HLADP + N
Sbjct: 201 SGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADPGHAN 254
>gi|551047|emb|CAA55864.1| type II LHCI [Lolium temulentum]
Length = 253
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 111/201 (55%), Gaps = 32/201 (15%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP +L G PGD+G+D GL +DPE+ N + E++HCRWAMLGA G PELL + G+
Sbjct: 57 PPPWLDGSLPGDFGFDPWGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPELLTKIGI- 115
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLG 181
W+ AG Q +Y + + ++ +++L+G EG R A P
Sbjct: 116 LNTPSWYTAGEQ-------EYFTDTT--------TLFVVELILIGWAEGRRWADIIKPGS 160
Query: 182 EVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFF 227
TDP+ YPGG FDPLG + PE EL+ KEIKNGRLAM ++ G +
Sbjct: 161 VNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGNGSPEKLKELRTKEIKNGRLAMLAVMGAW 220
Query: 228 VQAIVTGKGPLENLADHLADP 248
QA TG GP++NL HLADP
Sbjct: 221 FQAEYTGTGPIDNLFAHLADP 241
>gi|115472983|ref|NP_001060090.1| Os07g0577600 [Oryza sativa Japonica Group]
gi|34393511|dbj|BAC83072.1| putative photosystem I antenna protein [Oryza sativa Japonica
Group]
gi|113611626|dbj|BAF22004.1| Os07g0577600 [Oryza sativa Japonica Group]
gi|125558916|gb|EAZ04452.1| hypothetical protein OsI_26600 [Oryza sativa Indica Group]
gi|125600834|gb|EAZ40410.1| hypothetical protein OsJ_24861 [Oryza sativa Japonica Group]
gi|215678915|dbj|BAG96345.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679008|dbj|BAG96438.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679048|dbj|BAG96478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215686399|dbj|BAG87660.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737439|dbj|BAG96569.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737698|dbj|BAG96828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737734|dbj|BAG96864.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767334|dbj|BAG99562.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 263
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/252 (38%), Positives = 127/252 (50%), Gaps = 30/252 (11%)
Query: 7 ALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSV--SSGSPWYGPDRVKYLGPFSGE- 63
A +SSF+G A GR+ +R+ S S S PDR + F G
Sbjct: 20 ARASSFLGGA----------GRSGRLLLRQAESSSARASFAVRAAAPDRPIW---FPGST 66
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP +L G PGD+G+D GL +DPE+ N + E++HCRWAMLGA G PE L + G+
Sbjct: 67 PPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGI- 125
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIAGG 178
W+ AG Q + + +L + IL WA ++ G V I
Sbjct: 126 LNTPSWYTAGEQQY------FTDTTTLFIIELILIGWAEGRRWADIIKPGCVNTDPIFPN 179
Query: 179 PLGEVTDPLYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG G
Sbjct: 180 NKLTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTG 239
Query: 237 PLENLADHLADP 248
P++NL HLADP
Sbjct: 240 PIDNLFAHLADP 251
>gi|326496799|dbj|BAJ98426.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509469|dbj|BAJ91651.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509647|dbj|BAJ87039.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 257
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 114/207 (55%), Gaps = 32/207 (15%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP+YL G PGDYG+D GL PE + E++HCR+AM G G + +L+ +G+
Sbjct: 58 DPPAYLDGTLPGDYGFDPLGLGEQPEDLKWYVQAELVHCRFAMAGVAGILGTDLIRVSGI 117
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA------ 176
VWF+AGA F D+ + A++ Q++LMG VE R
Sbjct: 118 G-NLPVWFEAGATKF-----DF---------ANTTALFFVQLLLMGFVETKRYMDFVSPG 162
Query: 177 -----GGPLG-----EVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
G LG E P YPGG F+P+GLA D E E+K+KEIKNGRLAM +M G
Sbjct: 163 SQAKEGTFLGIEASLEGLQPGYPGGPLFNPMGLAKDIENANEVKLKEIKNGRLAMVAMLG 222
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNN 252
F VQA VT GP++NL HL+DP N N
Sbjct: 223 FIVQASVTHAGPIDNLLTHLSDPFNKN 249
>gi|226500382|ref|NP_001141936.1| uncharacterized protein LOC100274085 [Zea mays]
gi|194706506|gb|ACF87337.1| unknown [Zea mays]
gi|414884911|tpg|DAA60925.1| TPA: hypothetical protein ZEAMMB73_235289 [Zea mays]
gi|414884912|tpg|DAA60926.1| TPA: hypothetical protein ZEAMMB73_235289 [Zea mays]
Length = 164
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 99/158 (62%), Gaps = 10/158 (6%)
Query: 105 MLGALGCVFPELLARNG-VKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWA 161
ML ALG V PELL G V F E VW+K G LDYLG P A Q ++ I
Sbjct: 1 MLAALGVVVPELLDLFGLVHFVEPVWWKVGYAKLQGDNLDYLGIPGFRIAGGQGVVVIAI 60
Query: 162 CQVVLMGAVEGYRIAG----GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIK 214
CQ +LM E R G PLG D YPGG FDPLGL+ DP AF +LKVKEIK
Sbjct: 61 CQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGPLFDPLGLSKDPVAFEDLKVKEIK 120
Query: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
NGRLAM + FGF++QA VTGKGP++NL +HL+DP+NNN
Sbjct: 121 NGRLAMVAWFGFYIQAAVTGKGPVQNLVEHLSDPLNNN 158
>gi|226504520|ref|NP_001147224.1| chlorophyll a-b binding protein [Zea mays]
gi|195608716|gb|ACG26188.1| chlorophyll a-b binding protein [Zea mays]
Length = 256
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 109/201 (54%), Gaps = 32/201 (15%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP +L G PGD+G+D GLS+DPE+ N + E++HCRWAMLGA G PE L + G+
Sbjct: 60 PPEWLDGSLPGDFGFDPLGLSSDPESLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGI- 118
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLG 181
W+ AG Q +Y + + ++ +++L+G EG R A P
Sbjct: 119 LNTPSWYTAGEQ-------EYFTDKT--------TLFVVELILIGWAEGRRWADIIKPGS 163
Query: 182 EVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFF 227
TDP+ YPGG FDPLG P EL+ KEIKNGRLAM ++ G +
Sbjct: 164 VNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAW 223
Query: 228 VQAIVTGKGPLENLADHLADP 248
Q I TG GP++NL HLADP
Sbjct: 224 FQHIYTGTGPIDNLFAHLADP 244
>gi|20794|emb|CAA41407.1| Type III chlorophyll a /b-binding protein [Pinus sylvestris]
Length = 286
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 136/264 (51%), Gaps = 41/264 (15%)
Query: 14 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 73
GKA+ L P ++ S ++R SS P DR + S + SYL G P
Sbjct: 31 GKALVLPPYFSQSSRRTSFTVRS----QASSNKPVKQGDRQLWFA--SDQSLSYLDGSLP 84
Query: 74 GDYGWDTAGLSADPETFAKNREL------EVIHCRWAMLGALGCVFPELLARNGVKFGEA 127
GDYG+D GL DPE E E+I+ R+AMLGA+G + PE+L + G+ E
Sbjct: 85 GDYGFDPLGL-MDPEGPGGFMEPGWLVYGEIINGRYAMLGAVGAIAPEILGKLGLIPQET 143
Query: 128 V--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GP---- 179
WF+ G I G +Y +P ++ ++ LMG E R+ P
Sbjct: 144 ALPWFQTGV-IPPAGTYNYWADP--------FTLFVLEMALMGFAEHRRLQDYRNPGSMG 194
Query: 180 ----------LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 228
LG +P YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ G+F+
Sbjct: 195 KQYFLGLEKFLGGSGNPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFI 254
Query: 229 QAIVTGKGPLENLADHLADPVNNN 252
Q +VTG GP +NL DHLADPV+NN
Sbjct: 255 QGLVTGVGPFQNLLDHLADPVHNN 278
>gi|357137970|ref|XP_003570571.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Brachypodium distachyon]
Length = 259
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 115/207 (55%), Gaps = 32/207 (15%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP YL G PGDYG+D GL +P + E++HCR+AM G G + +L+ +G+
Sbjct: 60 DPPPYLDGTLPGDYGFDPLGLGEEPADLKWYVQAELVHCRFAMAGVAGILGTDLIRVSGI 119
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA------ 176
VWF+AGA F D+ + A++ Q++LMG VE R
Sbjct: 120 S-NLPVWFEAGATKF-----DF---------ANTTALFFVQLLLMGFVETKRYMDIVNPG 164
Query: 177 -----GGPLG-----EVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
G LG E P YPGG F+P+GLA D + E+K+KEIKNGRLAM +M G
Sbjct: 165 SQAEEGTFLGIEASLEGLQPGYPGGPLFNPMGLAKDIKNAHEVKLKEIKNGRLAMVAMLG 224
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNN 252
FFVQA VT GP++NL HL+DP NNN
Sbjct: 225 FFVQASVTHVGPIDNLLIHLSDPFNNN 251
>gi|226530077|ref|NP_001149586.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|194706946|gb|ACF87557.1| unknown [Zea mays]
gi|195628244|gb|ACG35952.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|413926425|gb|AFW66357.1| chlorophyll a-b binding protein 6A [Zea mays]
Length = 249
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 122/239 (51%), Gaps = 28/239 (11%)
Query: 19 LAPSGNELSNGGRISM--RKTGSKSVSSGSPWYGPDRVKYLGPFSGEP-PSYLTGEFPGD 75
LAPS + S GR+ T S V+ + W G+P P++L G PGD
Sbjct: 22 LAPSTSSSSRSGRLPFCAHATTSGRVTMSAEW-----------MPGQPRPAHLDGSSPGD 70
Query: 76 YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQ 135
+G+D GL+ PE F + +E EV HCRWAML G + PE L G W KA
Sbjct: 71 FGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEAL-------GLGNWVKAQEW 123
Query: 136 IFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFD 194
GG YLG P + ++ I A + V + E R + YPGG+FD
Sbjct: 124 AAVPGGQATYLGAP--VPWGTLPTILAVEFVAIAFAEHQRTME---KDPEKKKYPGGAFD 178
Query: 195 PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 252
PLG + DP E K+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN
Sbjct: 179 PLGFSRDPAKLEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLAAHLADPWHNN 237
>gi|358346569|ref|XP_003637339.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355503274|gb|AES84477.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 268
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 135/262 (51%), Gaps = 46/262 (17%)
Query: 4 STMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGE 63
S M S +F+G+ + ++++ +R + +V + + PDR + F G
Sbjct: 24 SPMGTSKAFLGRKL-------KVNSNIAAPVRVRSTTTVCAAAE---PDRPLW---FPGS 70
Query: 64 -PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
PP +L G PGD+G+D GLS+DPE+ N + E++HCRWAMLGA G PE L + G+
Sbjct: 71 TPPPWLDGSLPGDFGFDPLGLSSDPESLKWNVQAELVHCRWAMLGAAGIFIPEFLTKIGI 130
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPL 180
W+ AG Q +Y + + ++ +++ +G EG R A P
Sbjct: 131 -LNTPSWYTAGEQ-------EYFTDTT--------TLFIVELIFIGWAEGRRWADILNPG 174
Query: 181 GEVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGF 226
TDP+ YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G
Sbjct: 175 CVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKLKELRTKEIKNGRLAMLAVMGA 234
Query: 227 FVQAIVTGKGPLENLADHLADP 248
+ Q I TG GP++NL HLADP
Sbjct: 235 WFQHIYTGTGPIDNLFAHLADP 256
>gi|223973225|gb|ACN30800.1| unknown [Zea mays]
Length = 196
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 107/194 (55%), Gaps = 15/194 (7%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P P++L G PGD+G+D GL+ PE F + +E EV HCRWAML G + PE L
Sbjct: 3 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGILVPEAL--- 59
Query: 121 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W KA GG YLG P + ++ I + V + E R
Sbjct: 60 ----GLGNWVKAQEWAAVPGGQATYLGAP--VPWGTLPTILVIEFVAIAFAEHQRTME-- 111
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPL 238
+ YPGG+FDPLG + DP F E K+KEIKNGRLAM + GF V Q+ G GPL
Sbjct: 112 -KDPEKKKYPGGAFDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPL 170
Query: 239 ENLADHLADPVNNN 252
ENLA HLADP +NN
Sbjct: 171 ENLASHLADPWHNN 184
>gi|20792|emb|CAA41406.1| Type II chlorophyll a /b-binding protein [Pinus sylvestris]
Length = 278
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 130/258 (50%), Gaps = 45/258 (17%)
Query: 7 ALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPS 66
A +S VG+AV+L + + +++ S++V + P + P PP
Sbjct: 38 AKASFLVGRAVSLRQTKAAMPRRAAVTV----SQAVQTERPLWFPGNT---------PPP 84
Query: 67 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 126
+L G PGD+G+D GL +DPET + E++HCRWAMLGA G PEL + G+
Sbjct: 85 WLDGSLPGDFGFDPLGLGSDPETLKWMVQAELVHCRWAMLGAAGIFIPELCTKLGI-LNT 143
Query: 127 AVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVT 184
W+ AG L+Y + + ++ +++ +G EG R A P T
Sbjct: 144 PSWYTAGE-------LEYFTDKT--------TLFVVEMIFLGWAEGRRWADILEPGSVNT 188
Query: 185 DPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
DP+ YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA
Sbjct: 189 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQA 248
Query: 231 IVTGKGPLENLADHLADP 248
TG GP++NL HLADP
Sbjct: 249 EYTGTGPIDNLLAHLADP 266
>gi|351734432|ref|NP_001235996.1| uncharacterized protein LOC100305992 [Glycine max]
gi|255627211|gb|ACU13950.1| unknown [Glycine max]
Length = 240
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 108/194 (55%), Gaps = 15/194 (7%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P P YL G PGD+G+D L PE + +E E+IHC WAML G + PE L
Sbjct: 47 GQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCGWAMLAVPGILVPEAL--- 103
Query: 121 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W KA GG YLGNP + ++ I A + + + VE R G
Sbjct: 104 ----GLGNWVKAQEWAAVPGGQATYLGNP--VPWGTLPTILAIEFLAISFVEHQRSMGK- 156
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPL 238
+ YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GPL
Sbjct: 157 --DPEKKKYPGGAFDPLGYSKDPKTFHEYKVKELKNGRLALLAFVGFCVQQSAYPGTGPL 214
Query: 239 ENLADHLADPVNNN 252
ENLA HLADP +NN
Sbjct: 215 ENLAAHLADPWHNN 228
>gi|255087238|ref|XP_002505542.1| chlorophyll a/b-binding protein CP26, chloroplast precursor
[Micromonas sp. RCC299]
gi|226520812|gb|ACO66800.1| chlorophyll a/b-binding protein CP26, chloroplast precursor
[Micromonas sp. RCC299]
Length = 308
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 121/246 (49%), Gaps = 39/246 (15%)
Query: 34 MRKTGSKSVSSG--------SPWYGPDRVKYLGP----FSGEPPSYLTGEFPGDYGWDTA 81
+RK SSG S WYGP+R YL + + PSYL G GDYG+D
Sbjct: 62 VRKAAPVRKSSGKRGDGVDLSKWYGPNRRLYLPAGLLDINTDVPSYLDGSLAGDYGFDPL 121
Query: 82 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGG 141
L D + + R EVIH RWAML G V PE L G VW + G ++F +G
Sbjct: 122 QLGKDGKV-EQYRAAEVIHARWAMLAIPGIVIPEALGIPG-----GVWTETG-KVFLDG- 173
Query: 142 LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL--------GEVT-------DP 186
G P ++ + A A Q+ L AVEGYR P G+ + DP
Sbjct: 174 --EAGRPEILQNPYLFA--AIQIGLFAAVEGYRAGKAPAPDGFVPFKGKFSGSDFSGLDP 229
Query: 187 LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 246
+ PGG D +A P+ A LKVKEIKNGRLAM +M G FVQ + TG+GP N H+A
Sbjct: 230 INPGGPLDFFNVAATPDDLAVLKVKEIKNGRLAMIAMLGVFVQGLTTGEGPAANWGKHVA 289
Query: 247 DPVNNN 252
DP N
Sbjct: 290 DPFGYN 295
>gi|225449078|ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic
isoform 1 [Vitis vinifera]
gi|147800947|emb|CAN75566.1| hypothetical protein VITISV_032585 [Vitis vinifera]
Length = 244
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 107/194 (55%), Gaps = 15/194 (7%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 51 GQPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGVLVPEAL--- 107
Query: 121 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W +A GG YLGNP + ++ I A + + + VE R
Sbjct: 108 ----GLGNWVQAQEWAAIPGGQATYLGNP--VPWGNLPTILAIEFLAIAFVEHQRSMEK- 160
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPL 238
+ YPGG+FDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GPL
Sbjct: 161 --DTEKKKYPGGAFDPLGYSKDPVKFEEYKVKEIKNGRLAILAFVGFCVQQSAYPGTGPL 218
Query: 239 ENLADHLADPVNNN 252
ENLA HLADP +NN
Sbjct: 219 ENLASHLADPWHNN 232
>gi|115766|sp|P13869.1|CB12_PETHY RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCI type II CAB; Flags: Precursor
gi|169214|gb|AAA33711.1| chlorophyll binding protein precursor [Petunia x hybrida]
gi|226259|prf||1503272A chlorophyll binding protein
Length = 270
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 125/241 (51%), Gaps = 40/241 (16%)
Query: 29 GGRISMRK----TGSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGL 83
G R+ + K GS+SV+ + PDR + F G PP +L G PGD+G+D GL
Sbjct: 37 GKRLRVSKFIAPVGSRSVAVSAVAADPDRPLW---FPGSTPPEWLDGSLPGDFGFDPLGL 93
Query: 84 SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLD 143
+DPE+ N + E++H RWAMLGA G PE L + GV W+ AG Q +
Sbjct: 94 GSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV-LNTPSWYTAGEQ-------E 145
Query: 144 YLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPL------------YP 189
Y + + ++ ++VL+G EG R A P TDP+ YP
Sbjct: 146 YFTDTT--------TLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYP 197
Query: 190 GGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 247
GG FDPLG P EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLAD
Sbjct: 198 GGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLAD 257
Query: 248 P 248
P
Sbjct: 258 P 258
>gi|225436257|ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Vitis
vinifera]
Length = 274
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 119/213 (55%), Gaps = 37/213 (17%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
+YL G PGDYG+D GLS DPE F + R L EVI+ R+AMLGA+G + PE+L +
Sbjct: 64 TYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGK 122
Query: 120 NGVKFGEAV--WFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
G+ E WFK G +F G +Y +P ++ ++ LMG E R
Sbjct: 123 LGLIPPETALPWFKTG--VFPPAGTYNYWADP--------YTLFVFEMALMGFAEHRRFQ 172
Query: 177 --GGP--------------LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLA 219
P LG DP YPGG F+PLG D ++ +LK+KE+KNGRLA
Sbjct: 173 DWANPGSMGKQYFLGLEKYLGGSGDPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLA 232
Query: 220 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
M ++ G+F Q VTG GPL+NL DHLADPVNNN
Sbjct: 233 MLAILGYFAQGPVTGVGPLQNLLDHLADPVNNN 265
>gi|388495628|gb|AFK35880.1| unknown [Medicago truncatula]
Length = 268
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 115/215 (53%), Gaps = 36/215 (16%)
Query: 51 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 109
PDR + F G PP +L G PGD+G+D GLS+DPE+ N + E++HCRWAMLGA
Sbjct: 61 PDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLKWNVQAELVHCRWAMLGAA 117
Query: 110 GCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
G PE L + G+ W+ AG Q +Y + + ++ +++ +G
Sbjct: 118 GIFIPEFLTKIGI-LNTPSWYTAGEQ-------EYFTDTT--------TLFIVELIFIGW 161
Query: 170 VEGYRIAG--GPLGEVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEI 213
EG R A P TDP+ YPGG FDPLG P+ EL+ KEI
Sbjct: 162 AEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKLKELRTKEI 221
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
KNGRLAM ++ G + Q I TG GP++NL HLADP
Sbjct: 222 KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 256
>gi|308811240|ref|XP_003082928.1| unnamed protein product [Ostreococcus tauri]
gi|63029301|gb|AAY27549.1| chloroplast chlorophyll a/b-binding protein CP26 precursor Lhcb5
[Ostreococcus tauri]
gi|116054806|emb|CAL56883.1| unnamed protein product [Ostreococcus tauri]
Length = 316
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 117/222 (52%), Gaps = 29/222 (13%)
Query: 48 WYGPDRVKYL--GPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
WYGP+R YL G + + PSYL G GDYG+D GL AD + R E++H RWA
Sbjct: 93 WYGPNRKLYLPGGLLTKADLPSYLDGTLAGDYGFDPLGLGADGKV-KDYRVAEILHARWA 151
Query: 105 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV 164
ML G V PE L G VW + G ++F +G G S++ I A A QV
Sbjct: 152 MLAVPGVVIPEALNIPG-----GVWTETG-KVFLDG---ETGRDSILEFWPIYA--AIQV 200
Query: 165 VLMGAVEGYRIAG-GPLGEV-------------TDPLYPGGSFDPLGLADDPEAFAELKV 210
VLMG E +R G GP G V DP+ PGG D +A +P+ LKV
Sbjct: 201 VLMGGAEKFRQDGVGPAGFVPFKGKFEESAFNGLDPVNPGGPLDFFDVAKNPQDLQILKV 260
Query: 211 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
KEIKNGRLAM +M G FVQ VTG+GP N H+A+P N
Sbjct: 261 KEIKNGRLAMIAMLGVFVQGAVTGEGPAANWGKHVANPFGYN 302
>gi|187609488|gb|ACD13267.1| chlorophyll a/b binding protein precursor [Phyllostachys
fimbriligula]
Length = 204
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 107/196 (54%), Gaps = 15/196 (7%)
Query: 60 FSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
F G+P P++L G PGD+G+D GL PE F + +E EV HCRWAML G + PE L
Sbjct: 19 FPGQPRPAHLDGSSPGDFGFDPLGLGTVPENFERFKESEVYHCRWAMLCVPGVLVPEAL- 77
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGL-DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
G W KA GG Y G P + ++ I A + V + E R
Sbjct: 78 ------GLGNWVKAQEWAAVPGGQATYFGVP--VPWGNLPTILAIEFVAIAFAEHQRTME 129
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKG 236
+ YPGG+FDPLG + DP F E K+KEIKNGRLAM + GF V Q+ G G
Sbjct: 130 K---DPEKKKYPGGAFDPLGFSKDPVKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTG 186
Query: 237 PLENLADHLADPVNNN 252
PLENLA HLADP +NN
Sbjct: 187 PLENLASHLADPWHNN 202
>gi|209778965|gb|ACI87793.1| putative chloroplast chlorophyll a/b-binding protein [Cupressus
sempervirens]
Length = 106
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/111 (69%), Positives = 85/111 (76%), Gaps = 6/111 (5%)
Query: 82 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGG 141
GLSADPETFA +RELE IH R AM+GALGCV PELLA +GV+ GEAVW KA FSEGG
Sbjct: 2 GLSADPETFAMHRELE-IHSRRAMMGALGCVIPELLAIDGVRCGEAVWCKAAQ--FSEGG 58
Query: 142 LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS 192
LDYL +IHAQSILAIWA QVVL + GYR+ GG LGE DPLYPG +
Sbjct: 59 LDYL-RYVMIHAQSILAIWAFQVVL--RLIGYRVGGGRLGEGLDPLYPGSA 106
>gi|357122261|ref|XP_003562834.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Brachypodium distachyon]
Length = 258
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 105/192 (54%), Gaps = 14/192 (7%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP +L G PGD+G+D GL +DPE+ N + E++HCRWAMLGA G PELL + G+
Sbjct: 62 PPPWLDGSLPGDFGFDPWGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPELLTKIGI- 120
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIAGG 178
W+ AG Q + + +L + IL WA ++ G V I
Sbjct: 121 LNTPSWYTAGEQTY------FADTTTLFIVELILIGWAEGRRWADIIKPGCVNTDPIFPN 174
Query: 179 PLGEVTDPLYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG G
Sbjct: 175 NKLTGTDVGYPGGLWFDPLGYGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTG 234
Query: 237 PLENLADHLADP 248
P++NL HLADP
Sbjct: 235 PIDNLFAHLADP 246
>gi|6850838|emb|CAB71077.1| Lhca2 protein [Arabidopsis thaliana]
Length = 257
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 115/215 (53%), Gaps = 36/215 (16%)
Query: 51 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 109
PDR + F G PP +L G PGD+G+D GLS+DP++ N + E++HCRWAMLGA
Sbjct: 50 PDRPIW---FPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAA 106
Query: 110 GCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
G PE L + G+ W+ AG Q +Y + + ++ +++L+G
Sbjct: 107 GIFIPEFLTKIGI-LNTPSWYTAGEQ-------EYFTDKT--------TLFVVELILIGW 150
Query: 170 VEGYRIAG--GPLGEVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEI 213
EG R A P TDP+ YPGG FDPLG P EL+ KEI
Sbjct: 151 AEGRRWADIIKPGSVNTDPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEI 210
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
KNGRLAM ++ G + Q I TG GP++NL HLADP
Sbjct: 211 KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 245
>gi|357495589|ref|XP_003618083.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355519418|gb|AET01042.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 573
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 139/277 (50%), Gaps = 35/277 (12%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
MAT + SSS A + S S I + GS V + +P + L
Sbjct: 299 MATQVLLSSSSLTFAAEAVRQSFGARSLPSSIGSSRKGSFVVKAAAPVKKGGANRQLWFA 358
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 114
S + SYL G PGD+G+D GLS DPE F + L E+I+ R+AMLGA G + P
Sbjct: 359 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGVGGFIEPEWLAYGEIINGRFAMLGAAGAIAP 417
Query: 115 ELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG 172
E+L + G+ E WF+ G I G +Y + ++ ++ MG E
Sbjct: 418 EILGKAGLIPAETALPWFQTGV-IPPAGTYNYWADN--------YTLFVMEMAFMGFAEH 468
Query: 173 YRIAG----------------GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKN 215
R+ LG +P YPGG F+PLG D ++ ELK+KE+KN
Sbjct: 469 RRLQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKN 528
Query: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
GRLAM ++ G+F+QA+VTG GP +NL DHLADPVNNN
Sbjct: 529 GRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 565
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 140/281 (49%), Gaps = 41/281 (14%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGS----PWYGPDRVKY 56
MAT + SSS A + S S I + GS V + S G +R +
Sbjct: 1 MATQALVSSSSLTFAAEAVRQSFGARSLPSSIGSSRKGSFVVKAASSPPVKQNGANRQLW 60
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALG 110
S + SYL G PGD+G+D GLS DPE F + R L E+I+ R+AMLGA G
Sbjct: 61 FA--SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRFAMLGAAG 117
Query: 111 CVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG 168
+ PE+L + G+ E WF+ G I G +Y + ++ ++ MG
Sbjct: 118 AIAPEILGKAGLIPAETALPWFQTGV-IPPAGTYNYWADN--------YTLFVMEMAFMG 168
Query: 169 AVEGYRIAG----------------GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVK 211
E R LG +P YPGG F+PLG D ++ ELK+K
Sbjct: 169 FAEHRRFQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLK 228
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
E+KNGRLAM ++ G+F+QA+VTG GP +NL DHLADPVNNN
Sbjct: 229 EVKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 269
>gi|357495587|ref|XP_003618082.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355519417|gb|AET01041.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 557
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 139/277 (50%), Gaps = 35/277 (12%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF 60
MAT + SSS A + S S I + GS V + +P + L
Sbjct: 283 MATQVLLSSSSLTFAAEAVRQSFGARSLPSSIGSSRKGSFVVKAAAPVKKGGANRQLWFA 342
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 114
S + SYL G PGD+G+D GLS DPE F + L E+I+ R+AMLGA G + P
Sbjct: 343 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGVGGFIEPEWLAYGEIINGRFAMLGAAGAIAP 401
Query: 115 ELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG 172
E+L + G+ E WF+ G I G +Y + ++ ++ MG E
Sbjct: 402 EILGKAGLIPAETALPWFQTGV-IPPAGTYNYWADN--------YTLFVMEMAFMGFAEH 452
Query: 173 YRIAG----------------GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKN 215
R+ LG +P YPGG F+PLG D ++ ELK+KE+KN
Sbjct: 453 RRLQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKN 512
Query: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
GRLAM ++ G+F+QA+VTG GP +NL DHLADPVNNN
Sbjct: 513 GRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 549
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 140/281 (49%), Gaps = 41/281 (14%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGS----PWYGPDRVKY 56
MAT + SSS A + S S I + GS V + S G +R +
Sbjct: 1 MATQALVSSSSLTFAAEAVRQSFGARSLPSSIGSSRKGSFVVKAASSPPVKQNGANRQLW 60
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALG 110
S + SYL G PGD+G+D GLS DPE F + R L E+I+ R+AMLGA G
Sbjct: 61 FA--SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRFAMLGAAG 117
Query: 111 CVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG 168
+ PE+L + G+ E WF+ G I G +Y + ++ ++ MG
Sbjct: 118 AIAPEILGKAGLIPAETALPWFQTGV-IPPAGTYNYWADN--------YTLFVMEMAFMG 168
Query: 169 AVEGYRIAG----------------GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVK 211
E R LG +P YPGG F+PLG D ++ ELK+K
Sbjct: 169 FAEHRRFQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLK 228
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
E+KNGRLAM ++ G+F+QA+VTG GP +NL DHLADPVNNN
Sbjct: 229 EVKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 269
>gi|186511289|ref|NP_191706.2| photosystem I light harvesting complex protein [Arabidopsis
thaliana]
gi|4741940|gb|AAD28767.1|AF134120_1 Lhca2 protein [Arabidopsis thaliana]
gi|15451180|gb|AAK96861.1| Lhca2 protein [Arabidopsis thaliana]
gi|17529286|gb|AAL38870.1| putative Lhca2 protein [Arabidopsis thaliana]
gi|18377464|gb|AAL66898.1| Lhca2 protein [Arabidopsis thaliana]
gi|25083456|gb|AAN72081.1| Lhca2 protein [Arabidopsis thaliana]
gi|332646688|gb|AEE80209.1| photosystem I light harvesting complex protein [Arabidopsis
thaliana]
Length = 257
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 115/215 (53%), Gaps = 36/215 (16%)
Query: 51 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 109
PDR + F G PP +L G PGD+G+D GLS+DP++ N + E++HCRWAMLGA
Sbjct: 50 PDRPIW---FPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAA 106
Query: 110 GCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
G PE L + G+ W+ AG Q +Y + + ++ +++L+G
Sbjct: 107 GIFIPEFLTKIGI-LNTPSWYTAGEQ-------EYFTDKT--------TLFVVELILIGW 150
Query: 170 VEGYRIAG--GPLGEVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEI 213
EG R A P TDP+ YPGG FDPLG P EL+ KEI
Sbjct: 151 AEGRRWADIIKPGSVNTDPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEI 210
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
KNGRLAM ++ G + Q I TG GP++NL HLADP
Sbjct: 211 KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 245
>gi|116519121|gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
Length = 275
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 142/284 (50%), Gaps = 47/284 (16%)
Query: 1 MATSTMALSSSFVGKA------VNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRV 54
MAT+ LSS G+ V PS S+ + S K+ S+ G DR
Sbjct: 1 MATTQALLSSMEAGRQLLGGRPVQWTPS-RSFSSSRKASFV---VKAASTPPVKQGADRQ 56
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGA 108
+ S + SYL G PGD+G+D GLS DPE F + + L E+I+ R+AMLG
Sbjct: 57 LWFA--SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRYAMLGV 113
Query: 109 LGCVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVL 166
G + PE+L + G+ E WF+ G I G Y +P ++ ++ L
Sbjct: 114 AGAIAPEILGKLGLIPPETALPWFQTGV-IPPAGTYSYWADP--------YTLFVLEMAL 164
Query: 167 MGAVEGYRIA--GGP--------------LGEVTDPLYPGGS-FDPLGLADDPEAFAELK 209
MG E R P LG DP YPGG F+PLG D ++ ELK
Sbjct: 165 MGFAEHRRFQDWAKPGSMGKQYFLGFEKFLGGSGDPAYPGGPIFNPLGFGKDEKSMKELK 224
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
+KE+KNGRLAM ++ GFF+Q +VTG GP +NL DHLADPVNNN
Sbjct: 225 LKEVKNGRLAMLAILGFFIQGLVTGVGPFQNLLDHLADPVNNNV 268
>gi|312283035|dbj|BAJ34383.1| unnamed protein product [Thellungiella halophila]
Length = 256
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 109/201 (54%), Gaps = 32/201 (15%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP +L G PGD+G+D GLS+DP++ N + E++HCRWAMLGA G PE L + G+
Sbjct: 60 PPEWLDGSLPGDFGFDPLGLSSDPDSLKWNAQAELVHCRWAMLGAAGIFIPEFLTKIGI- 118
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLG 181
W+ AG Q +Y + + ++ +++L+G EG R A P
Sbjct: 119 LNTPSWYTAGEQ-------EYFTDKT--------TLFVVELILIGWAEGRRWADIIKPGS 163
Query: 182 EVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFF 227
TDP+ YPGG FDPLG P EL+ KEIKNGRLAM ++ G +
Sbjct: 164 VNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAW 223
Query: 228 VQAIVTGKGPLENLADHLADP 248
Q I TG GP++NL HLADP
Sbjct: 224 FQHIYTGTGPIDNLFAHLADP 244
>gi|666054|emb|CAA59049.1| LHCI-680, photosystem I antenna protein [Hordeum vulgare subsp.
vulgare]
gi|326493584|dbj|BAJ85253.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 105/192 (54%), Gaps = 14/192 (7%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP +L G PGD+G+D GL +DPE+ N + E++HCRWAMLGA G PELL + G+
Sbjct: 59 PPPWLDGSLPGDFGFDPWGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPELLTKIGI- 117
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIAGG 178
W+ AG Q + + +L + IL WA ++ G V I
Sbjct: 118 LNTPSWYTAGEQEY------FTDTTTLFIVELILIGWAEGRRWADIIKPGCVNTDPIFPN 171
Query: 179 PLGEVTDPLYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG G
Sbjct: 172 NKLTGTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTG 231
Query: 237 PLENLADHLADP 248
P++NL HLADP
Sbjct: 232 PIDNLFAHLADP 243
>gi|296086034|emb|CBI31475.3| unnamed protein product [Vitis vinifera]
Length = 201
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 107/194 (55%), Gaps = 15/194 (7%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 8 GQPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGVLVPEAL--- 64
Query: 121 GVKFGEAVWFKAGAQIFSEGGL-DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W +A GG YLGNP + ++ I A + + + VE R
Sbjct: 65 ----GLGNWVQAQEWAAIPGGQATYLGNP--VPWGNLPTILAIEFLAIAFVEHQRSMEK- 117
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPL 238
+ YPGG+FDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GPL
Sbjct: 118 --DTEKKKYPGGAFDPLGYSKDPVKFEEYKVKEIKNGRLAILAFVGFCVQQSAYPGTGPL 175
Query: 239 ENLADHLADPVNNN 252
ENLA HLADP +NN
Sbjct: 176 ENLASHLADPWHNN 189
>gi|388515199|gb|AFK45661.1| unknown [Medicago truncatula]
Length = 277
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 140/281 (49%), Gaps = 41/281 (14%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGS----PWYGPDRVKY 56
MAT + SSS A + S S I + GS V + S G +R +
Sbjct: 1 MATQALVSSSSLTFAAEAVRQSFGARSLPSSIGSSRKGSFVVKAASSPPVKQNGANRQLW 60
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALG 110
S + SYL G PGD+G+D GLS DPE F + R L E+I+ R+AMLGA G
Sbjct: 61 FA--SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRFAMLGAAG 117
Query: 111 CVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG 168
+ PE+L + G+ E WF+ G I G +Y + ++ ++ MG
Sbjct: 118 AIAPEILGKAGLIPAETALPWFQTGV-IPPAGTYNYWADN--------YTLFVMEMAFMG 168
Query: 169 AVEGYRIAG----------------GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVK 211
E R LG +P YPGG F+PLG D ++ ELK+K
Sbjct: 169 FAEHRRFQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLK 228
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
E+KNGRLAM ++ G+F+QA+VTG GP +NL DHLADPVNNN
Sbjct: 229 EVKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 269
>gi|115813|sp|P27522.1|CB13_SOLLC RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;
AltName: Full=LHCI type III CAB-8; Flags: Precursor
gi|19182|emb|CAA33330.1| Type III chlorophyll a/b-binding protein [Solanum lycopersicum]
Length = 273
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 119/217 (54%), Gaps = 35/217 (16%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 114
S + SYL G PGD+G+D GLS DPE F + + L EVI+ R+AMLGA G + P
Sbjct: 59 SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAP 117
Query: 115 ELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG 172
E+L + G+ E WF+ G I G +Y + ++ ++ LMG E
Sbjct: 118 EILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADN--------YTLFVLEMALMGFAEH 168
Query: 173 YRIAG----------------GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKN 215
R LG DP YPGG F+PLG D ++ ELK+KEIKN
Sbjct: 169 RRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKN 228
Query: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
GRLAM ++ G+F+QA+VTG GP +NL DHLADPVNNN
Sbjct: 229 GRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 265
>gi|212274977|ref|NP_001130616.1| uncharacterized protein LOC100191715 [Zea mays]
gi|195636368|gb|ACG37652.1| chlorophyll a-b binding protein [Zea mays]
gi|414590632|tpg|DAA41203.1| TPA: chlorophyll a-b binding protein [Zea mays]
Length = 260
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 105/192 (54%), Gaps = 14/192 (7%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP +L G PGD+G+D GL +DPE+ N + E++HCRWAMLGA G PE L + GV
Sbjct: 64 PPPWLDGSLPGDFGFDPWGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGV- 122
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIAGG 178
W+ AG Q + + +L + IL WA ++ G+V I
Sbjct: 123 LNTPFWYTAGEQQY------FTDTTTLFIIELILIGWAEGRRWADIIKPGSVNTDPIFPS 176
Query: 179 PLGEVTDPLYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG G
Sbjct: 177 NKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTG 236
Query: 237 PLENLADHLADP 248
P++NL HLADP
Sbjct: 237 PIDNLFAHLADP 248
>gi|226499760|ref|NP_001148893.1| chlorophyll a-b binding protein [Zea mays]
gi|195622990|gb|ACG33325.1| chlorophyll a-b binding protein [Zea mays]
gi|414887286|tpg|DAA63300.1| TPA: chlorophyll a-b binding protein isoform 1 [Zea mays]
gi|414887287|tpg|DAA63301.1| TPA: chlorophyll a-b binding protein isoform 2 [Zea mays]
gi|414887288|tpg|DAA63302.1| TPA: chlorophyll a-b binding protein isoform 3 [Zea mays]
Length = 270
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 105/192 (54%), Gaps = 14/192 (7%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP +L G PGD+G+D GL +DPE+ N + E++HCRWAMLGA G PE L + GV
Sbjct: 74 PPPWLDGSLPGDFGFDPWGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGV- 132
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIAGG 178
W+ AG Q + + +L + IL WA ++ G+V I
Sbjct: 133 LNTPFWYTAGEQQY------FTDTTTLFIIELILIGWAEGRRWADIIKPGSVNTDPIFPS 186
Query: 179 PLGEVTDPLYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG G
Sbjct: 187 NKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTG 246
Query: 237 PLENLADHLADP 248
P++NL HLADP
Sbjct: 247 PIDNLFAHLADP 258
>gi|217071344|gb|ACJ84032.1| unknown [Medicago truncatula]
gi|388494662|gb|AFK35397.1| unknown [Medicago truncatula]
Length = 282
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 107/197 (54%), Gaps = 21/197 (10%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P PSYL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 52 GQPRPSYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEAL--- 108
Query: 121 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W KA GG YLGNP + ++ I + + + VE R
Sbjct: 109 ----GLGNWVKAQEWAALPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR----- 157
Query: 180 LGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGK 235
DP YPGG+FDPLG + DP+ F E K+KE+KNGRLA+ + G VQ G
Sbjct: 158 -SMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKIKEVKNGRLALLAFVGIVVQQTAYPGT 216
Query: 236 GPLENLADHLADPVNNN 252
GPLENLA HLADP +NN
Sbjct: 217 GPLENLATHLADPWHNN 233
>gi|195613254|gb|ACG28457.1| chlorophyll a-b binding protein 8 [Zea mays]
gi|238013956|gb|ACR38013.1| unknown [Zea mays]
gi|413954858|gb|AFW87507.1| chlorophyll a-b binding protein 8 [Zea mays]
Length = 267
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/279 (37%), Positives = 139/279 (49%), Gaps = 47/279 (16%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSP--WYGPDRVKYLG 58
MA + +G+ V A S R S RK +S SP G DR +
Sbjct: 1 MAAQALLSGRQLLGRPVQSAVS--------RSSARKAPFVVRASSSPPAKQGADRQLWFA 52
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCV 112
S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G +
Sbjct: 53 --SKQSLSYLDGTLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAI 109
Query: 113 FPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 170
PE+ + G+ E WFK G I G +Y + ++ + LMG
Sbjct: 110 APEIFGKMGIIPPETALPWFKTGV-IPPAGTYNYWADS--------YTLFVFNMALMGFA 160
Query: 171 EGYRIAG----GPLGEVT------------DPLYPGGS-FDPLGLADDPEAFAELKVKEI 213
E R+ G +G+ DP YPGG F+PLG + ELK+KEI
Sbjct: 161 EHRRLQDWYNPGSMGKQYFLGLEKFLAGSGDPSYPGGPLFNPLGFGKTEKEMNELKLKEI 220
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
KNGRLAM ++ G+F+Q +VTG GP +NL DHLADPVNNN
Sbjct: 221 KNGRLAMLAILGYFIQGLVTGVGPFQNLLDHLADPVNNN 259
>gi|449435085|ref|XP_004135326.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Cucumis sativus]
gi|449529174|ref|XP_004171576.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Cucumis sativus]
Length = 271
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 116/215 (53%), Gaps = 36/215 (16%)
Query: 51 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 109
PDR + F G PP +L G PGD+G+D GL++DPE+ N++ E++HCRWAMLGA
Sbjct: 64 PDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120
Query: 110 GCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
G PE L + G+ W+ AG L+Y + + ++ +++ +G
Sbjct: 121 GIFIPEFLTKIGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVELIFIGW 164
Query: 170 VEGYRIAG--GPLGEVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEI 213
EG R A P TDP+ YPGG FDPLG PE EL+ KEI
Sbjct: 165 AEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI 224
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
KNGRLAM ++ G + Q I TG GP++NL HLADP
Sbjct: 225 KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 259
>gi|297817464|ref|XP_002876615.1| Lhca2 protein [Arabidopsis lyrata subsp. lyrata]
gi|297322453|gb|EFH52874.1| Lhca2 protein [Arabidopsis lyrata subsp. lyrata]
Length = 257
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 115/215 (53%), Gaps = 36/215 (16%)
Query: 51 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 109
PDR + F G PP +L G PGD+G+D GLS+DP++ N + E++HCRWAMLGA
Sbjct: 50 PDRPIW---FPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAELVHCRWAMLGAA 106
Query: 110 GCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
G PE L + G+ W+ AG Q +Y + + ++ +++L+G
Sbjct: 107 GIFIPEFLTKIGI-LNTPSWYTAGEQ-------EYFTDKT--------TLFVVELILIGW 150
Query: 170 VEGYRIAG--GPLGEVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEI 213
EG R A P TDP+ YPGG FDPLG P EL+ KEI
Sbjct: 151 AEGRRWADIIKPGSVNTDPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEI 210
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
KNGRLAM ++ G + Q I TG GP++NL HLADP
Sbjct: 211 KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 245
>gi|255567170|ref|XP_002524566.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223536119|gb|EEF37774.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 273
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 117/212 (55%), Gaps = 35/212 (16%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
+YL G PGD+G+D GLS DPE F + + L E+I+ R+AMLGA G + PE+L +
Sbjct: 64 TYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGK 122
Query: 120 NGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
G+ E WF+ G I G DY +P ++ ++ LMG E R
Sbjct: 123 AGLIPPETALPWFQTGV-IPPAGTYDYWADP--------YTLFVFEMALMGFAEHRRFQD 173
Query: 178 GP----------------LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAM 220
LG DP YPGG F+PLG D ++ ELK+KE+KNGRLAM
Sbjct: 174 WAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAM 233
Query: 221 FSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 234 LAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 265
>gi|226872|prf||1609235A chlorophyll a/b binding protein
Length = 273
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 119/217 (54%), Gaps = 35/217 (16%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 114
S + SYL G PGD+G+D GLS DPE F + + L EVI+ R+AMLGA G + P
Sbjct: 59 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAP 117
Query: 115 ELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG 172
E+L + G+ E WF+ G I G +Y + ++ ++ LMG E
Sbjct: 118 EILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADN--------YTLFVLEMALMGFAEH 168
Query: 173 YRIAG----------------GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKN 215
R LG DP YPGG F+PLG D ++ ELK+KEIKN
Sbjct: 169 RRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKN 228
Query: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
GRLAM ++ G+F+QA+VTG GP +NL DHLADPVNNN
Sbjct: 229 GRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 265
>gi|194704284|gb|ACF86226.1| unknown [Zea mays]
Length = 269
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 107/198 (54%), Gaps = 14/198 (7%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP YL G PGD+G+D GL +PE + E++HCR+AM G G +F +LL +G
Sbjct: 70 DPPPYLDGTLPGDFGFDPLGLGEEPEALKWYVQAELVHCRFAMAGVAGILFTDLLRVSG- 128
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG-------AVEGYRI 175
VWF+AGA F D+ +L Q L +A M A EG I
Sbjct: 129 NSDLPVWFEAGAAKF-----DFANTTALFFVQLFLMGFAETKRYMDFKNPGSQAEEGTFI 183
Query: 176 AGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
P YPGG F+PLGLA D E + K+KEIKNGRLAM +M GF VQA VT
Sbjct: 184 GLEAALAGQQPGYPGGPLFNPLGLAKDIENAHDEKLKEIKNGRLAMVAMLGFMVQASVTH 243
Query: 235 KGPLENLADHLADPVNNN 252
GP++NL HL+DP N N
Sbjct: 244 AGPIDNLLTHLSDPFNKN 261
>gi|116519125|gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
Length = 275
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 121/229 (52%), Gaps = 37/229 (16%)
Query: 50 GPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRW 103
G DR + S + SYL G PGD+G+D GLS DPE F + + L E+I+ R+
Sbjct: 52 GADRQLWFA--SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRY 108
Query: 104 AMLGALGCVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 161
AMLG G + PE+L + G+ E WF+ G I G Y +P ++
Sbjct: 109 AMLGVAGAIAPEILGKLGLIPPETALPWFQTGV-IPPAGTYSYWADP--------YTLFV 159
Query: 162 CQVVLMGAVEGYRIA--GGP--------------LGEVTDPLYPGGS-FDPLGLADDPEA 204
++ LMG E R P LG DP YPGG F+PLG D +
Sbjct: 160 LEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKFLGGSGDPAYPGGPIFNPLGFGKDERS 219
Query: 205 FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
ELK+KE+KNGRLAM ++ GFF+Q +VTG GP +NL DHLADPVNNN
Sbjct: 220 MKELKLKEVKNGRLAMLAILGFFIQGLVTGVGPFQNLLDHLADPVNNNV 268
>gi|226498858|ref|NP_001148187.1| LOC100281795 [Zea mays]
gi|195616580|gb|ACG30120.1| chlorophyll a-b binding protein 4 [Zea mays]
Length = 269
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 107/198 (54%), Gaps = 14/198 (7%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP YL G PGD+G+D GL +PE + E++HCR+AM G G +F +LL +G
Sbjct: 70 DPPPYLDGTLPGDFGFDPLGLGEEPEALKWYVQAELVHCRFAMAGVAGILFTDLLRVSG- 128
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG-------AVEGYRI 175
VWF+AGA F D+ +L Q L +A M A EG I
Sbjct: 129 NSDLPVWFEAGAAKF-----DFANTTALFFVQLFLMGFAETKRYMDFKNPGSQAEEGTFI 183
Query: 176 AGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
P YPGG F+PLGLA D E + K+KEIKNGRLAM +M GF VQA VT
Sbjct: 184 GLEAALAGQQPGYPGGPLFNPLGLAKDIENAHDEKLKEIKNGRLAMVAMLGFMVQASVTH 243
Query: 235 KGPLENLADHLADPVNNN 252
GP++NL HL+DP N N
Sbjct: 244 AGPIDNLLTHLSDPFNKN 261
>gi|430947|gb|AAA18206.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 273
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 35/217 (16%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 114
S + SYL G PGDYG+D GLS DPE F + R L E+I+ R+AMLGA G + P
Sbjct: 59 SSQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAP 117
Query: 115 ELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG 172
E+L + G+ E WF+ G I G Y + ++ ++ LMG E
Sbjct: 118 EILGKAGLIPAETALPWFQTGV-IPPAGTYTYWADN--------YTLFVLEMALMGFAEH 168
Query: 173 YRIAG----GPLGEVT------------DPLYPGGSF-DPLGLADDPEAFAELKVKEIKN 215
R+ G +G+ +P YPGG F +PLG D ++ ELK+KE+KN
Sbjct: 169 RRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKN 228
Query: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
GRLAM ++ G+F+Q +VTG GP +NL DHLADPVNNN
Sbjct: 229 GRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN 265
>gi|145688411|gb|ABO71660.2| LhCa2 protein [Brassica juncea]
Length = 256
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 108/201 (53%), Gaps = 32/201 (15%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP +L G PGD+G+D GLS+DP++ N + E++HCRWAMLGA G PE L + G+
Sbjct: 60 PPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGI- 118
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLG 181
W+ AG Q +Y + + ++ +++L+G EG R A P
Sbjct: 119 LNTPSWYTAGEQ-------EYFTDKT--------TLFVVELILIGWAEGRRWADIIKPGS 163
Query: 182 EVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFF 227
TDP+ YPGG FDPLG P EL+ KEIKNGRL M ++ G +
Sbjct: 164 VNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLTMLAVMGAW 223
Query: 228 VQAIVTGKGPLENLADHLADP 248
Q I TG GP++NL HLADP
Sbjct: 224 FQHIYTGTGPIDNLFAHLADP 244
>gi|15219941|ref|NP_176347.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
gi|334183551|ref|NP_001185280.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
gi|4585882|gb|AAD25555.1|AC005850_12 PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|16649019|gb|AAL24361.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|20260044|gb|AAM13369.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|332195725|gb|AEE33846.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
gi|332195727|gb|AEE33848.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
Length = 273
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 35/217 (16%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 114
S + SYL G PGDYG+D GLS DPE F + R L E+I+ R+AMLGA G + P
Sbjct: 59 SSQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAP 117
Query: 115 ELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG 172
E+L + G+ E WF+ G I G Y + ++ ++ LMG E
Sbjct: 118 EILGKAGLIPAETALPWFQTGV-IPPAGTYTYWADN--------YTLFVLEMALMGFAEH 168
Query: 173 YRIAG----GPLGEVT------------DPLYPGGSF-DPLGLADDPEAFAELKVKEIKN 215
R+ G +G+ +P YPGG F +PLG D ++ ELK+KE+KN
Sbjct: 169 RRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKN 228
Query: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
GRLAM ++ G+F+Q +VTG GP +NL DHLADPVNNN
Sbjct: 229 GRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN 265
>gi|413939030|gb|AFW73581.1| chlorophyll a-b binding protein 4 [Zea mays]
Length = 315
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 107/198 (54%), Gaps = 14/198 (7%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP YL G PGD+G+D GL +PE + E++HCR+AM G G +F +LL +G
Sbjct: 116 DPPPYLDGTLPGDFGFDPLGLGEEPEALKWYVQAELVHCRFAMAGVAGILFTDLLRVSG- 174
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG-------AVEGYRI 175
VWF+AGA F D+ +L Q L +A M A EG I
Sbjct: 175 NSDLPVWFEAGAAKF-----DFANTTALFFVQLFLMGFAETKRYMDFKNPGSQAEEGTFI 229
Query: 176 AGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
P YPGG F+PLGLA D E + K+KEIKNGRLAM +M GF VQA VT
Sbjct: 230 GLEAALAGQQPGYPGGPLFNPLGLAKDIENAHDEKLKEIKNGRLAMVAMLGFMVQASVTH 289
Query: 235 KGPLENLADHLADPVNNN 252
GP++NL HL+DP N N
Sbjct: 290 AGPIDNLLTHLSDPFNKN 307
>gi|224057740|ref|XP_002299309.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
gi|222846567|gb|EEE84114.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
Length = 272
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 113/215 (52%), Gaps = 36/215 (16%)
Query: 51 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 109
PDR + F G PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA
Sbjct: 65 PDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWAMLGAA 121
Query: 110 GCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
G PE L + G+ W+ AG L+Y + + ++ ++ +G
Sbjct: 122 GIFIPEFLTKIGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVELFFIGW 165
Query: 170 VEGYRIAG--GPLGEVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEI 213
EG R A P TDP+ YPGG FDPLG PE EL+ KEI
Sbjct: 166 AEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI 225
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
KNGRLAM ++ G + Q I TG GP++NL HLADP
Sbjct: 226 KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 260
>gi|303288722|ref|XP_003063649.1| chlorophyll a/b-binding protein CP26, chloroplast precursor
[Micromonas pusilla CCMP1545]
gi|226454717|gb|EEH52022.1| chlorophyll a/b-binding protein CP26, chloroplast precursor
[Micromonas pusilla CCMP1545]
Length = 306
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 118/247 (47%), Gaps = 40/247 (16%)
Query: 34 MRKTGSKSVSSGSP---------WYGPDRVKYLGPFSGEP----PSYLTGEFPGDYGWDT 80
++K SSG P WYG +R YL +P PSY+ G GDYG+D
Sbjct: 59 VKKAAPVKKSSGKPSQAGGDLAKWYGKNRRFYLPSGLLDPATDVPSYMDGTLAGDYGFDP 118
Query: 81 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 140
L AD + R EVIH RWAML G V PE L G VW + G ++F +G
Sbjct: 119 LKLGADGK-INDYRAAEVIHARWAMLAIPGIVIPEALGIPG-----GVWTETG-KVFLDG 171
Query: 141 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR--IAGGPLGEV-------------TD 185
G P ++ I A Q+ L AVEGYR P G V D
Sbjct: 172 ---EAGRPEILQNPIIFA--GIQIALFAAVEGYRSGKVAPPEGFVPGKGKFSGSDFAGLD 226
Query: 186 PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 245
P+ PGG D +A PE A LKVKEIKNGRLAM +M G FVQ + TG+GP N H+
Sbjct: 227 PINPGGPLDFFNVASTPEDLAILKVKEIKNGRLAMIAMLGVFVQGLTTGEGPAANWGKHV 286
Query: 246 ADPVNNN 252
ADP N
Sbjct: 287 ADPFGYN 293
>gi|75220641|sp|Q32904.1|CB23_PEA RecName: Full=Chlorophyll a-b binding protein 3, chloroplastic;
AltName: Full=LHCII type III CAB-3; Flags: Precursor
gi|309673|gb|AAA84545.1| light harvesting protein [Pisum sativum]
Length = 275
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 145/285 (50%), Gaps = 51/285 (17%)
Query: 1 MATSTMALSSS--FVGKAVNLA------PSGNELSNGGRISMRKTGSKSVSSGSPWYGPD 52
MAT + SSS F +AV + PS S G + R + V G G D
Sbjct: 1 MATQALVSSSSLTFAAEAVRQSFRARSLPSSVGCSRKGLV--RAAATPPVKQG----GVD 54
Query: 53 RVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAML 106
R + S + SYL G PGDYG+D GLS DPE F + R L EVI+ R+AML
Sbjct: 55 RPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAML 111
Query: 107 GALGCVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV 164
GA+G + PE L + G+ E WF+ G I G +Y + ++ ++
Sbjct: 112 GAVGAIAPEYLGKVGLIPQETALAWFQTGV-IPPAGTYNYWADN--------YTLFVLEM 162
Query: 165 VLMGAVEGYRIAG----GPLGEVT------------DPLYPGGSF-DPLGLADDPEAFAE 207
LMG E R G +G+ +P YPGG F +PLG D ++ E
Sbjct: 163 ALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKE 222
Query: 208 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
LK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL DH+ADPVNNN
Sbjct: 223 LKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNN 267
>gi|449442612|ref|XP_004139075.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Cucumis sativus]
gi|449532766|ref|XP_004173351.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Cucumis sativus]
Length = 273
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 116/212 (54%), Gaps = 35/212 (16%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
SYL G PGD+G+D GLS DPE F + R L EVI+ R+AMLGA G + PE+
Sbjct: 64 SYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGS 122
Query: 120 NGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA- 176
G+ E WFK G I G +Y +P ++ ++ LMG E R
Sbjct: 123 LGLIPPETALPWFKTGV-IPPAGTYNYWADP--------YTLFVFEMALMGFAEHRRFQD 173
Query: 177 -GGP--------------LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAM 220
P LG DP YPGG F+PLG D ++ ELK+KEIKNGRLAM
Sbjct: 174 WAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAM 233
Query: 221 FSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
++ G+F+Q +VTG GP +NL DHL+DPVNNN
Sbjct: 234 LAILGYFIQGLVTGVGPYQNLLDHLSDPVNNN 265
>gi|356559462|ref|XP_003548018.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 1 [Glycine max]
gi|255645717|gb|ACU23352.1| unknown [Glycine max]
Length = 270
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 117/220 (53%), Gaps = 20/220 (9%)
Query: 38 GSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
G++S ++ PDR + F G PP +L G PGD+G+D GL++DPE+ N +
Sbjct: 50 GARSSTTVCAVAEPDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNVQA 106
Query: 97 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 156
E++HCRWAMLGA G PE L + G+ W+ AG L+Y + + + +
Sbjct: 107 ELVHCRWAMLGAAGIFIPEFLTKIGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEL 158
Query: 157 LAI-WA-----CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLAD-DPEAFAEL 208
I WA ++ G V I TD YPGG FDPLG PE EL
Sbjct: 159 FFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKEL 218
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP
Sbjct: 219 RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
>gi|222423311|dbj|BAH19631.1| AT1G45474 [Arabidopsis thaliana]
Length = 248
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 124/227 (54%), Gaps = 18/227 (7%)
Query: 32 ISMRKTGSKSVSSG-SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF 90
I+ R + K+ G +P +R +L + PP YL G GDYG+D GL DPE+
Sbjct: 16 ITRRISSVKAAGGGINPTVAVERATWLPGLN--PPPYLDGNLAGDYGFDPLGLGEDPESL 73
Query: 91 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 150
+ E++H R+AMLG G +F +LL G++ VW++AGA F D+ +L
Sbjct: 74 KWYVQAELVHSRFAMLGVAGILFTDLLRTTGIR-NLPVWYEAGAVKF-----DFASTKTL 127
Query: 151 IHAQSILAIWACQVVLMGAV-------EGYRIAGGPLG-EVTDPLYPGGSF-DPLGLADD 201
I Q +L +A M V EG G E +P YPGG +PLGLA D
Sbjct: 128 IVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKD 187
Query: 202 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
+ + K+KEIKNGRLAM +M GFFVQA VT GP++NL +HL++P
Sbjct: 188 VQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNP 234
>gi|15220077|ref|NP_175137.1| photosystem I light harvesting complex protein 5 [Arabidopsis
thaliana]
gi|30693978|ref|NP_849778.1| photosystem I light harvesting complex protein 5 [Arabidopsis
thaliana]
gi|12321000|gb|AAG50618.1|AC083835_3 light-harvesting complex protein [Arabidopsis thaliana]
gi|17063199|gb|AAL32974.1| At1g45474/F2G19.4 [Arabidopsis thaliana]
gi|19699116|gb|AAL90924.1| At1g45474/F2G19.4 [Arabidopsis thaliana]
gi|62320735|dbj|BAD95402.1| light-harvesting complex protein [Arabidopsis thaliana]
gi|332193996|gb|AEE32117.1| photosystem I light harvesting complex protein 5 [Arabidopsis
thaliana]
gi|332193997|gb|AEE32118.1| photosystem I light harvesting complex protein 5 [Arabidopsis
thaliana]
Length = 256
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 124/227 (54%), Gaps = 18/227 (7%)
Query: 32 ISMRKTGSKSVSSG-SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF 90
I+ R + K+ G +P +R +L + PP YL G GDYG+D GL DPE+
Sbjct: 24 ITRRISSVKAAGGGINPTVAVERATWLPGLN--PPPYLDGNLAGDYGFDPLGLGEDPESL 81
Query: 91 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 150
+ E++H R+AMLG G +F +LL G++ VW++AGA F D+ +L
Sbjct: 82 KWYVQAELVHSRFAMLGVAGILFTDLLRTTGIR-NLPVWYEAGAVKF-----DFASTKTL 135
Query: 151 IHAQSILAIWACQVVLMGAV-------EGYRIAGGPLG-EVTDPLYPGGSF-DPLGLADD 201
I Q +L +A M V EG G E +P YPGG +PLGLA D
Sbjct: 136 IVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKD 195
Query: 202 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
+ + K+KEIKNGRLAM +M GFFVQA VT GP++NL +HL++P
Sbjct: 196 VQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNP 242
>gi|118487538|gb|ABK95596.1| unknown [Populus trichocarpa]
Length = 269
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 113/215 (52%), Gaps = 36/215 (16%)
Query: 51 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 109
PDR + F G PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA
Sbjct: 62 PDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWAMLGAA 118
Query: 110 GCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
G PE L + G+ W+ AG L+Y + + ++ ++ +G
Sbjct: 119 GIFIPEFLTKIGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVELFFIGW 162
Query: 170 VEGYRIAG--GPLGEVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEI 213
EG R A P TDP+ YPGG FDPLG PE EL+ KEI
Sbjct: 163 AEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI 222
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
KNGRLAM ++ G + Q I TG GP++NL HLADP
Sbjct: 223 KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 257
>gi|356559464|ref|XP_003548019.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 2 [Glycine max]
Length = 281
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 117/220 (53%), Gaps = 20/220 (9%)
Query: 38 GSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
G++S ++ PDR + F G PP +L G PGD+G+D GL++DPE+ N +
Sbjct: 61 GARSSTTVCAVAEPDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNVQA 117
Query: 97 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 156
E++HCRWAMLGA G PE L + G+ W+ AG L+Y + + + +
Sbjct: 118 ELVHCRWAMLGAAGIFIPEFLTKIGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEL 169
Query: 157 LAI-WA-----CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLAD-DPEAFAEL 208
I WA ++ G V I TD YPGG FDPLG PE EL
Sbjct: 170 FFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKEL 229
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP
Sbjct: 230 RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 269
>gi|242066618|ref|XP_002454598.1| hypothetical protein SORBIDRAFT_04g034130 [Sorghum bicolor]
gi|241934429|gb|EES07574.1| hypothetical protein SORBIDRAFT_04g034130 [Sorghum bicolor]
Length = 266
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 109/207 (52%), Gaps = 32/207 (15%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP +L G PGD+G+D GL DP + + E++HCR+AM G G +F +LL +G
Sbjct: 67 DPPPHLDGTLPGDFGFDPLGLGEDPASLKWYVQAELVHCRFAMAGVAGILFTDLLRVSG- 125
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA-----G 177
VWF+AGA F + A++ Q++LMG E R G
Sbjct: 126 NSDLPVWFEAGAAKFEFA--------------NTTALFFVQLLLMGFAETKRYMDFKNPG 171
Query: 178 GPLGEVT-----------DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
E T P YPGG F+PLGLA D E E K+KEIKNGRLAM +M G
Sbjct: 172 SQAEEGTFIGLEAALAGQQPGYPGGPLFNPLGLAKDIENAHEEKLKEIKNGRLAMVAMLG 231
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNN 252
F VQA VT GP++NL HL+DP N N
Sbjct: 232 FMVQASVTHAGPIDNLLTHLSDPFNKN 258
>gi|356520198|ref|XP_003528751.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 1 [Glycine max]
Length = 270
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 110/207 (53%), Gaps = 20/207 (9%)
Query: 51 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 109
PDR + F G PP +L G PGD+G+D GL +DPE+ N + E++HCRWAMLGA
Sbjct: 63 PDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAA 119
Query: 110 GCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI-WA-----CQ 163
G PE L + G+ W+ AG L+Y + + + + I WA
Sbjct: 120 GIFIPEFLTKIGI-LNTPSWYTAGE-------LEYFTDTTTLFVVELFFIGWAEGRRWAD 171
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMF 221
++ G V I TD YPGG FDPLG PE EL+ KEIKNGRLAM
Sbjct: 172 IIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAML 231
Query: 222 SMFGFFVQAIVTGKGPLENLADHLADP 248
++ G + Q I TG GP++NL HLADP
Sbjct: 232 AVMGAWFQHIYTGTGPIDNLFAHLADP 258
>gi|297840405|ref|XP_002888084.1| hypothetical protein ARALYDRAFT_475174 [Arabidopsis lyrata subsp.
lyrata]
gi|297333925|gb|EFH64343.1| hypothetical protein ARALYDRAFT_475174 [Arabidopsis lyrata subsp.
lyrata]
Length = 273
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 35/217 (16%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 114
S + SYL G PGDYG+D GLS DPE F + R L E+I+ R+AMLGA G + P
Sbjct: 59 SSQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAP 117
Query: 115 ELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG 172
E+L + G+ E WF+ G I G Y + ++ ++ LMG E
Sbjct: 118 EILGKAGLIPPETALPWFQTGV-IPPAGTYTYWADN--------YTLFVLEMALMGFAEH 168
Query: 173 YRIAG----GPLGEVT------------DPLYPGGSF-DPLGLADDPEAFAELKVKEIKN 215
R+ G +G+ +P YPGG F +PLG D ++ ELK+KE+KN
Sbjct: 169 RRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKN 228
Query: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
GRLAM ++ G+F+Q +VTG GP +NL DHLADPVNNN
Sbjct: 229 GRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN 265
>gi|145079801|tpg|DAA05936.1| TPA_inf: chloroplast light-harvesting complex protein CP26
precursor Lhcb5 [Micromonas sp. CCMP490]
Length = 333
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 120/242 (49%), Gaps = 45/242 (18%)
Query: 43 SSGSPWYGPDRVKYLGP----FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 98
S S WYGP+R YL + + PSY+ G GDYG+D L D A+ R EV
Sbjct: 103 SDKSKWYGPNRRLYLPAGLLDINTDVPSYMNGTLAGDYGFDPLQLGKD-GKIAQYRIAEV 161
Query: 99 IHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGL---DYLGNPSLIHAQS 155
H RWAML G V PE L GV G W + G ++F +G + LGNP L A
Sbjct: 162 QHARWAMLAVPGVVIPEAL---GVPGGN--WTETG-KVFLDGEAGRPEILGNPYLFTA-- 213
Query: 156 ILAIWACQVVLMGAVEGYRIAG--GPLG-------------EVTDPLYPGGSFDPLGLAD 200
+V L+ VEGYR P G + DP+ PGG D L +A
Sbjct: 214 ------IEVALLAGVEGYRSGKLEAPAGFAPIYGKFEGKDFKGLDPINPGGPLDFLNVAS 267
Query: 201 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT-GKGPLENLADHLADPVNNNAWAYATN 259
PE A LKVKEIKNGRLAM +M G FVQ T G+GP N A H+ADP +A N
Sbjct: 268 TPEDLAILKVKEIKNGRLAMIAMLGVFVQGATTGGEGPATNWAKHVADP-------FAYN 320
Query: 260 FV 261
FV
Sbjct: 321 FV 322
>gi|21593722|gb|AAM65689.1| light-harvesting complex protein [Arabidopsis thaliana]
Length = 256
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 124/227 (54%), Gaps = 18/227 (7%)
Query: 32 ISMRKTGSKSVSSG-SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF 90
I+ R + K+ G +P +R +L + PP YL G GDYG+D GL DPE+
Sbjct: 24 ITRRISSVKAAGGGINPTVAVERATWLPGLN--PPPYLDGNLAGDYGFDPLGLGEDPESL 81
Query: 91 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 150
+ E++H R+AMLG G +F +LL G++ VW++AGA F D+ +L
Sbjct: 82 KWYVQAELVHSRFAMLGVAGILFTDLLRTTGIR-NLPVWYEAGAVKF-----DFASTKTL 135
Query: 151 IHAQSILAIWACQVVLMGAV-------EGYRIAGGPLG-EVTDPLYPGGSF-DPLGLADD 201
I Q +L +A M V EG G E +P YPGG +PLGLA D
Sbjct: 136 IVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGIEAALEGLEPGYPGGPLLNPLGLAKD 195
Query: 202 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
+ + K+KEIKNGRLAM +M GFFVQA VT GP++NL +HL++P
Sbjct: 196 VKNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNP 242
>gi|224131950|ref|XP_002321218.1| light-harvesting complex I protein Lhca3 [Populus trichocarpa]
gi|118485656|gb|ABK94678.1| unknown [Populus trichocarpa]
gi|222861991|gb|EEE99533.1| light-harvesting complex I protein Lhca3 [Populus trichocarpa]
Length = 274
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 119/212 (56%), Gaps = 35/212 (16%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
SYL G PGD+G+D GLS DPE F + + L E+I+ R+AMLGA+G + PE+L +
Sbjct: 65 SYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAPEILGK 123
Query: 120 NGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA- 176
G+ E WF+ G I G Y +P ++ ++ LMG E R+
Sbjct: 124 AGLIPPETALPWFRTGV-IPPAGTYSYWADP--------YTLFVFEMALMGFAEHRRLQD 174
Query: 177 -GGP--------------LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAM 220
P LG +P YPGG F+PLG D ++ +LK+KE+KNGRLAM
Sbjct: 175 WAKPGSMGKQYFLGFEKYLGGSGEPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAM 234
Query: 221 FSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
++ G+FVQ +VTG GP +NL DHLADPV+NN
Sbjct: 235 LAILGYFVQGLVTGVGPYQNLLDHLADPVHNN 266
>gi|356520200|ref|XP_003528752.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 2 [Glycine max]
Length = 281
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 116/220 (52%), Gaps = 20/220 (9%)
Query: 38 GSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
G++S ++ PDR + F G PP +L G PGD+G+D GL +DPE+ N +
Sbjct: 61 GARSSTTVCAVAEPDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQA 117
Query: 97 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 156
E++HCRWAMLGA G PE L + G+ W+ AG L+Y + + + +
Sbjct: 118 ELVHCRWAMLGAAGIFIPEFLTKIGI-LNTPSWYTAGE-------LEYFTDTTTLFVVEL 169
Query: 157 LAI-WA-----CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLAD-DPEAFAEL 208
I WA ++ G V I TD YPGG FDPLG PE EL
Sbjct: 170 FFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKEL 229
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP
Sbjct: 230 RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 269
>gi|4741942|gb|AAD28768.1|AF134121_1 Lhca5 protein [Arabidopsis thaliana]
Length = 256
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 124/227 (54%), Gaps = 18/227 (7%)
Query: 32 ISMRKTGSKSVSSG-SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF 90
I+ R + K+ G +P +R +L + PP YL G GDYG+D GL DPE+
Sbjct: 24 ITRRISSVKAAGGGINPTVAVERATWLPGLN--PPPYLDGNLAGDYGFDPLGLGEDPESL 81
Query: 91 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 150
+ E++H R+AMLG G +F +LL G++ VW++AGA F D+ +L
Sbjct: 82 KWYVQAELVHSRFAMLGVAGILFTDLLRTTGIR-NLPVWYEAGAVKF-----DFACTKTL 135
Query: 151 IHAQSILAIWACQVVLMGAV-------EGYRIAGGPLG-EVTDPLYPGGSF-DPLGLADD 201
I Q +L +A M V EG G E +P YPGG +PLGLA D
Sbjct: 136 IVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKD 195
Query: 202 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
+ + K+KEIKNGRLAM +M GFFVQA VT GP++NL +HL++P
Sbjct: 196 VQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNP 242
>gi|356554088|ref|XP_003545381.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
isoform 1 [Glycine max]
gi|356554090|ref|XP_003545382.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
isoform 2 [Glycine max]
Length = 276
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 119/212 (56%), Gaps = 35/212 (16%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
SYL G PGDYG+D GLS DPE F + + L E+I+ R+AMLGA+G + PE+L +
Sbjct: 67 SYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAPEILGK 125
Query: 120 NGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA- 176
G+ E WF+ G +F G + + ++ ++ LMG E R
Sbjct: 126 AGLIPQETALPWFRTG--VFPPAG-------TYNYWADSYTLFVFEMALMGFAEHRRFQD 176
Query: 177 -GGP--------------LGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAM 220
P LG +P YPGG F +PLG D ++ +LK+KE+KNGRLAM
Sbjct: 177 WAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAM 236
Query: 221 FSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
++ G+FVQA+VTG GP +NL DHLADPV+NN
Sbjct: 237 LAILGYFVQALVTGVGPYQNLLDHLADPVHNN 268
>gi|356501755|ref|XP_003519689.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
[Glycine max]
Length = 276
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 119/212 (56%), Gaps = 35/212 (16%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
SYL G PGDYG+D GLS DPE F + + L E+I+ R+AMLGA+G + PE+L +
Sbjct: 67 SYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAPEILGK 125
Query: 120 NGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA- 176
G+ E WF+ G +F G + + ++ ++ LMG E R
Sbjct: 126 AGLIPQETALPWFRTG--VFPPAG-------TYNYWADSYTLFVFEMALMGFAEHRRFQD 176
Query: 177 -GGP--------------LGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAM 220
P LG +P YPGG F +PLG D ++ +LK+KE+KNGRLAM
Sbjct: 177 WAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAM 236
Query: 221 FSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
++ G+FVQA+VTG GP +NL DHLADPV+NN
Sbjct: 237 LAILGYFVQALVTGVGPYQNLLDHLADPVHNN 268
>gi|312281797|dbj|BAJ33764.1| unnamed protein product [Thellungiella halophila]
Length = 273
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 35/217 (16%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 114
S + +YL G PGDYG+D GLS DPE F + R L E+I+ R+AMLGA G + P
Sbjct: 59 SSQSLTYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAP 117
Query: 115 ELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG 172
E+L + G+ E WF+ G I G Y + ++ ++ LMG E
Sbjct: 118 EILGKAGLIPAETALPWFQTGV-IPPAGTYSYWADN--------YTLFVLEMALMGFAEH 168
Query: 173 YRIAG----GPLGEVT------------DPLYPGGSF-DPLGLADDPEAFAELKVKEIKN 215
R+ G +G+ +P YPGG F +PLG + ++ ELK+KEIKN
Sbjct: 169 RRLQDWYNPGSMGKQYFLGLEKGFSGSGEPAYPGGPFFNPLGFGKNEKSMKELKLKEIKN 228
Query: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
GRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 229 GRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 265
>gi|356552039|ref|XP_003544379.1| PREDICTED: LOW QUALITY PROTEIN: chlorophyll a-b binding protein 4,
chloroplastic-like [Glycine max]
Length = 274
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 112/224 (50%), Gaps = 34/224 (15%)
Query: 48 WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
WYG D +LG S + PSYLTGE PGDY +D GL DP K E++H RW L
Sbjct: 71 WYGEDGPPWLGSISYKYPSYLTGEMPGDYDFDIVGLGQDPVELXKYFNFEILHARWVTLA 130
Query: 108 ALGCVFPELLARNG-VKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA--QSILAIWACQV 164
+ V P++L G V F E VW++AG LDYL L A Q + I CQ+
Sbjct: 131 FVSAVIPKILNLLGAVHFVEPVWWRAGYSKLKVNTLDYLRIQGLHLAGSQGAVVIAICQI 190
Query: 165 VLMGAVEGYRIAG----GPLGEV--TDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGR 217
+ E R G PLG D YPGG+ FDPL L++DPEAF ELKVKE+KNG
Sbjct: 191 LKQVGPEYARXCGTEALKPLGIYLPCDINYPGGALFDPLNLSNDPEAFEELKVKEVKNG- 249
Query: 218 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV 261
+L DH++DP +NN + NF+
Sbjct: 250 ----------------------SLIDHISDPFHNNLLG-SLNFI 270
>gi|302854202|ref|XP_002958611.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis]
gi|300256072|gb|EFJ40348.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis]
Length = 228
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 124/256 (48%), Gaps = 33/256 (12%)
Query: 6 MALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPP 65
MALS V A AP G G R++ G + V W P S + P
Sbjct: 1 MALSMRTV-SAKTAAPRGFA---GRRVAAVSNGCRVVMKAGNWL---------PGS-DAP 46
Query: 66 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 125
++L + PG+YG+D L DP + + E EVIH RWAMLG G + ELL G
Sbjct: 47 AWLPDDLPGNYGFDPLSLGKDPASLKRFTESEVIHGRWAMLGVAGALAVELL-------G 99
Query: 126 EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTD 185
W+ A + G + G ++LA + V M A EG R G +
Sbjct: 100 YGNWYDAPLWAVTGGKATWFGIEVPFDLNTLLAF---EFVAMAAAEGQRNDAGGV----- 151
Query: 186 PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 245
+YPGG+FDPLG A D ELK+KEIKNGRLAM + GF Q TGKGPL L +HL
Sbjct: 152 -IYPGGAFDPLGFAKDSSKAGELKLKEIKNGRLAMVAFLGFIAQHAATGKGPLAALGEHL 210
Query: 246 ADPVNNNAWAYATNFV 261
A+P N +ATN V
Sbjct: 211 ANPWGAN---FATNGV 223
>gi|118489607|gb|ABK96605.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 261
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 125/245 (51%), Gaps = 36/245 (14%)
Query: 32 ISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETF 90
+ +R +K VSS PDR + F G PP +L G PGD+G+D GL +DPE+
Sbjct: 35 VKVRVNATKGVSSVCEPLPPDRPLW---FPGSSPPEWLDGSLPGDFGFDPLGLGSDPESL 91
Query: 91 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 150
+ E+IH RWAML A G + PE L R G WF AG + +Y +P+
Sbjct: 92 KWFAQAELIHGRWAMLAAAGILIPEWLERLGF-IDNFNWFDAGTR-------EYFADPT- 142
Query: 151 IHAQSILAIWACQVVLMGAVEGYRIA----------GGPLGEVTDPL----YPGGS-FDP 195
++ Q++LMG +EG R A L T P YPGG FDP
Sbjct: 143 -------TLFVVQLILMGWIEGRRWADMIKPGCVDIDPKLPHKTKPKPDIGYPGGLWFDP 195
Query: 196 LGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 254
PE ++ KEIKNGRLAM + GF+ QAI TG+GP++NL H+ADP + N +
Sbjct: 196 WNWGRGSPEPVMAIRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIDNLMAHIADPGHCNIF 255
Query: 255 AYATN 259
+ T+
Sbjct: 256 SAFTS 260
>gi|224069184|ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Populus trichocarpa]
gi|222833488|gb|EEE71965.1| light-harvesting complex I protein Lhca6 [Populus trichocarpa]
Length = 261
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 125/245 (51%), Gaps = 36/245 (14%)
Query: 32 ISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETF 90
+ +R +K VSS PDR + F G PP +L G PGD+G+D GL +DPE+
Sbjct: 35 VKVRVNATKGVSSVCEPLPPDRPLW---FPGSSPPEWLDGSLPGDFGFDPLGLGSDPESL 91
Query: 91 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 150
+ E+IH RWAML A G + PE L R G WF AG + +Y +P+
Sbjct: 92 KWFAQAELIHGRWAMLAAAGILIPEWLERLGF-IDNFNWFDAGTR-------EYFADPT- 142
Query: 151 IHAQSILAIWACQVVLMGAVEGYRIA----------GGPLGEVTDPL----YPGGS-FDP 195
++ Q++LMG +EG R A L T P YPGG FDP
Sbjct: 143 -------TLFVVQLILMGWIEGRRWADMIKPGCVDIDPKLPHKTKPKPDVGYPGGLWFDP 195
Query: 196 LGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 254
PE ++ KEIKNGRLAM + GF+ QAI TG+GP++NL H+ADP + N +
Sbjct: 196 WNWGRGSPEPVMAIRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIDNLMAHIADPGHCNIF 255
Query: 255 AYATN 259
+ T+
Sbjct: 256 SAFTS 260
>gi|118487549|gb|ABK95601.1| unknown [Populus trichocarpa]
Length = 269
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 117/225 (52%), Gaps = 36/225 (16%)
Query: 51 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 109
PDR + F G PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA
Sbjct: 62 PDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWAMLGAA 118
Query: 110 GCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
G PE L + G+ W+ AG ++Y + + ++ ++ +G
Sbjct: 119 GIFIPEFLTKIGI-LNTPSWYSAGE-------VEYFTDTT--------TLFIVELFFIGW 162
Query: 170 VEGYRIAG--GPLGEVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEI 213
EG R A P TDP+ YPGG FDPLG PE EL+ KEI
Sbjct: 163 AEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI 222
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT 258
KNGRLAM ++ G + Q I TG GP++NL HLADP + +A T
Sbjct: 223 KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFT 267
>gi|147841900|emb|CAN72005.1| hypothetical protein VITISV_033663 [Vitis vinifera]
Length = 272
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 108/201 (53%), Gaps = 32/201 (15%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP +L G PGD+G+D GL +DPET + E++HCRWAMLGA G PE L + G+
Sbjct: 76 PPPWLDGSLPGDFGFDPLGLGSDPETLKWMVQSEIVHCRWAMLGAAGIFIPEFLTKIGI- 134
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLG 181
W+ AG L+Y + + ++ +++ +G EG R A P
Sbjct: 135 LNTPSWYTAGE-------LEYFTDKT--------TLFIVEMIFIGWAEGRRWADIIKPGC 179
Query: 182 EVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFF 227
TDP+ YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G +
Sbjct: 180 VNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPDKIKELRTKEIKNGRLAMLAVMGAW 239
Query: 228 VQAIVTGKGPLENLADHLADP 248
QAI TG GP++NL HLADP
Sbjct: 240 FQAIYTGTGPIDNLFAHLADP 260
>gi|224072580|ref|XP_002303791.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
gi|222841223|gb|EEE78770.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
Length = 269
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 117/225 (52%), Gaps = 36/225 (16%)
Query: 51 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 109
PDR + F G PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA
Sbjct: 62 PDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWAMLGAA 118
Query: 110 GCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
G PE L + G+ W+ AG ++Y + + ++ ++ +G
Sbjct: 119 GIFIPEFLTKIGI-LNTPSWYSAGE-------VEYFTDTT--------TLFIVELFFIGW 162
Query: 170 VEGYRIAG--GPLGEVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEI 213
EG R A P TDP+ YPGG FDPLG PE EL+ KEI
Sbjct: 163 AEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI 222
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT 258
KNGRLAM ++ G + Q I TG GP++NL HLADP + +A T
Sbjct: 223 KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFT 267
>gi|87313163|gb|ABD37878.1| light-harvesting chlorophyll-a/b binding protein Lhca1 [Mesostigma
viride]
gi|145079752|tpg|DAA05929.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca1 [Mesostigma viride]
Length = 225
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 107/189 (56%), Gaps = 17/189 (8%)
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
P++L G PGD+G+D GL+ DP + A+ RE EV++ RWAMLG G + PEL+
Sbjct: 49 PAHLDGSLPGDFGYDPLGLAKDPVSLARYREAEVMNGRWAMLGVAGMLAPELV------- 101
Query: 125 GEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVT 184
G+ W A + G YLGN ++LA+ + + VE I+ G +
Sbjct: 102 GQGTWLSAQDWAVTGGKPTYLGNELPYGFGTVLAV---EFFCLSWVE---ISRGLEKDPM 155
Query: 185 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 244
+YPGG+FDPLG D KVKE++NGRLAM + G + Q I G GP+ NL DH
Sbjct: 156 KRIYPGGAFDPLGFGKDEVN----KVKELRNGRLAMVAFVGMWCQGIHVGGGPVSNLMDH 211
Query: 245 LADPVNNNA 253
LADP++NNA
Sbjct: 212 LADPLHNNA 220
>gi|255085312|ref|XP_002505087.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas sp. RCC299]
gi|226520356|gb|ACO66345.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas sp. RCC299]
Length = 242
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 128/252 (50%), Gaps = 28/252 (11%)
Query: 8 LSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEP-PS 66
L++ K+ + P G +++ R S+R +V++ P + P G P P+
Sbjct: 9 LAAGLTQKSRTVRPRG--VASKARASVR---VGAVAAARPTWLP----------GSPAPA 53
Query: 67 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 126
+L G P DYG+D L ADPE + E++HCRWAMLG G V PELL + G+
Sbjct: 54 HLDGTLPCDYGFDPLNLGADPENLKWFVQAELMHCRWAMLGLAGMVGPELLTKIGMA-DL 112
Query: 127 AVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIAGGPLG 181
W AG +LG L Q + WA + G + + G G
Sbjct: 113 PNWIDAGKWDGY-----WLGAGPLFFVQMAMMNWAEVRRWQDMKAPGTMNEDPLTGANKG 167
Query: 182 EV-TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
+ TD YP G FDP+G A DP+ ELK KEI NGRLAM ++ G F QAI TG GP++N
Sbjct: 168 DTNTDVGYPKGLFDPMGYAKDPKKAEELKRKEIANGRLAMVAIVGCFAQAISTGTGPVDN 227
Query: 241 LADHLADPVNNN 252
L HLADP +NN
Sbjct: 228 LFTHLADPGHNN 239
>gi|118489937|gb|ABK96765.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 274
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 118/212 (55%), Gaps = 35/212 (16%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
SYL G PGD+G+D GLS DPE F + + L E+I+ R+AMLGA+G + PE+L +
Sbjct: 65 SYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAPEILGK 123
Query: 120 NGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA- 176
G+ E WF+ G I G Y +P ++ ++ LMG E R
Sbjct: 124 AGLIPPETALPWFRTGV-IPPAGTYSYWADP--------YTLFVFEMALMGFAEHRRFQD 174
Query: 177 -GGP--------------LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAM 220
P LG +P YPGG F+PLG D ++ +LK+KE+KNGRLAM
Sbjct: 175 WAKPGSMGKQYFLGFEKYLGGSGEPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAM 234
Query: 221 FSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
++ G+FVQ +VTG GP +NL DHLADPV+NN
Sbjct: 235 LAILGYFVQGLVTGVGPYQNLLDHLADPVHNN 266
>gi|297846882|ref|XP_002891322.1| light-harvesting complex protein [Arabidopsis lyrata subsp. lyrata]
gi|297337164|gb|EFH67581.1| light-harvesting complex protein [Arabidopsis lyrata subsp. lyrata]
Length = 256
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 112/195 (57%), Gaps = 15/195 (7%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP YL G+ GDYG+D GL DPE+ + E++H R+AMLG G +F +LL G+
Sbjct: 54 DPPPYLDGKLAGDYGFDPLGLGEDPESLRWYVQAELVHSRFAMLGVAGILFTDLLRTTGI 113
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV-------EGYRI 175
+ VW++AGA F D+ +LI Q +L +A + V EG
Sbjct: 114 R-NLPVWYEAGAVKF-----DFASTKTLIVVQFLLMGFAETKRYVDYVSPGSQAKEGSFF 167
Query: 176 AGGPLG-EVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 233
G E +P YPGG +PLGLA D + + K+KEIKNGRLAM +M GFFVQA VT
Sbjct: 168 FGIEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMMAMLGFFVQASVT 227
Query: 234 GKGPLENLADHLADP 248
GP++NL +HL++P
Sbjct: 228 HTGPIDNLVEHLSNP 242
>gi|412987928|emb|CCO19324.1| predicted protein [Bathycoccus prasinos]
Length = 415
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 107/189 (56%), Gaps = 10/189 (5%)
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG-VK 123
PSYL G GD +D LS E +N ELE++H RWAML +G PE+L+R+G ++
Sbjct: 225 PSYLDGTLAGDAQFDPLRLSDTEEKRRRNVELELLHGRWAMLAVVGVCVPEILSRSGALE 284
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNP--SLIHAQSILAIWACQVVLMGAVEGYRIAG---- 177
E +W+K G ++ ++YLG + A I+ I CQ VLMG E R G
Sbjct: 285 LSEPIWWKIGEKVLEGIDVNYLGIEGFHIAGASGIIGIAFCQAVLMGGPEYARYVGIESL 344
Query: 178 GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
P+G D YPGG FDP L+ D E EL+V E+K+GRLAM +M G F QA VT
Sbjct: 345 EPVGVYLPGDTNYPGGGPFDPFNLSADAERDVELRVSEVKHGRLAMIAMLGVFAQAFVTR 404
Query: 235 KGPLENLAD 243
+GP+ N+ +
Sbjct: 405 EGPVANVLE 413
>gi|412985627|emb|CCO19073.1| unknown [Bathycoccus prasinos]
Length = 291
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 112/225 (49%), Gaps = 29/225 (12%)
Query: 46 SPWYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 102
S WYGP R YL + + PSYL G+ GDYG+D GL AD + R EVIH R
Sbjct: 65 SKWYGPQRKLYLPSGLLTTADIPSYLDGKLAGDYGFDPLGLGAD-GAIKQYRVAEVIHAR 123
Query: 103 WAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWAC 162
WAML G V PE L G G+ W + G ++F EG G L ++ A
Sbjct: 124 WAMLAVPGIVIPEALNIAG---GD--WRETG-KVFLEGSTGRFGPAELWLGIAV----AP 173
Query: 163 QVVLMGAVEGYRI--AGGPLGEV-------------TDPLYPGGSFDPLGLADDPEAFAE 207
+VLMG E +R A P G V DP+ PGG D +A P+
Sbjct: 174 LIVLMGGAEKFRSDPASAPSGFVPFKGSFTGKDFAKLDPINPGGPLDFYNVAATPQDLEI 233
Query: 208 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
LKVKEIKNGRLAM +M G FVQ TG+GP N H+ADP N
Sbjct: 234 LKVKEIKNGRLAMIAMLGVFVQGATTGEGPAANWGKHVADPFGYN 278
>gi|602359|emb|CAA57492.1| Type II chlorophyll a/b binding protein from photosystem I [Pisum
sativum]
Length = 269
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 113/215 (52%), Gaps = 36/215 (16%)
Query: 51 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 109
PDR + F G PP +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA
Sbjct: 62 PDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHSRWAMLGAA 118
Query: 110 GCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
G PE L + G+ W+ AG Q +Y + + ++ ++V +G
Sbjct: 119 GIFIPEFLTKLGI-LNTPSWYTAGEQ-------EYFTDTT--------TLFIVELVFIGW 162
Query: 170 VEGYRIAG--GPLGEVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEI 213
EG R A P TDP+ YPGG FDPLG P+ EL+ KEI
Sbjct: 163 AEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSASPQKLKELRTKEI 222
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
KNGRLAM ++ G + Q I TG GP++NL HLADP
Sbjct: 223 KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 257
>gi|384247026|gb|EIE20514.1| light harvesting complex protein I-20 [Coccomyxa subellipsoidea
C-169]
Length = 229
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 127/254 (50%), Gaps = 36/254 (14%)
Query: 8 LSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSY 67
L+SSFV + + SNG R+ M+ +G+ G D P+Y
Sbjct: 6 LTSSFVARGAARPATKLPKSNGSRVVMK--------AGNWLPGSDT-----------PAY 46
Query: 68 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 127
L G PG +G+D GL + P + +E E++H RWAM G G + ELL G+
Sbjct: 47 LDG-LPGSFGFDPFGLGSTPANLQRFQEAELVHSRWAMAGVAGALGAELL-------GQG 98
Query: 128 VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL 187
W++A + G YLG P + ++LAI + V + E R A P E
Sbjct: 99 DWYQAPLWAVNGGAPTYLGIPVPFNLSTLLAI---EFVAIAGAEAQRNAE-PDAEKRK-- 152
Query: 188 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 247
YPGG+FDPLG + D + E K+KE+KNGRLAM + GF Q TGKGPLE L HLAD
Sbjct: 153 YPGGAFDPLGFSKDSKVLEENKLKELKNGRLAMLAFVGFIAQHAATGKGPLEALKLHLAD 212
Query: 248 PVNNNAWAYATNFV 261
P N +ATN V
Sbjct: 213 PWGAN---FATNGV 223
>gi|255640167|gb|ACU20374.1| unknown [Glycine max]
Length = 276
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 118/212 (55%), Gaps = 35/212 (16%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
SYL G PGDYG+D GLS DPE F + + L E+I+ R+AMLGA+G + PE+L +
Sbjct: 67 SYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAPEILGK 125
Query: 120 NGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA- 176
G+ E WF+ G +F G + + ++ ++ LMG E R
Sbjct: 126 AGLIPQETALPWFRTG--VFPPAG-------TYNYWADSYTLFVFEMALMGFAEHRRFQD 176
Query: 177 -GGP--------------LGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAM 220
P LG +P YPGG F +PLG D ++ +LK+KE+KNGRLAM
Sbjct: 177 WAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAM 236
Query: 221 FSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
++ G+FVQA+VTG GP +NL DHL DPV+NN
Sbjct: 237 LAILGYFVQALVTGVGPYQNLLDHLTDPVHNN 268
>gi|268612160|pdb|2WSC|3 Chain 3, Improved Model Of Plant Photosystem I
gi|268612178|pdb|2WSE|3 Chain 3, Improved Model Of Plant Photosystem I
gi|268612196|pdb|2WSF|3 Chain 3, Improved Model Of Plant Photosystem I
Length = 276
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 118/212 (55%), Gaps = 35/212 (16%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
SYL G PGDYG+D GLS DPE F + + L E+I+ R+AMLGA+G + PE+L +
Sbjct: 67 SYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAPEILGK 125
Query: 120 NGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA- 176
G+ E WF+ G I G +Y + ++ ++ LMG E R
Sbjct: 126 AGLIPQETALPWFRTGF-IPPAGTYNYWADS--------YTLFVFEMALMGFAEHRRFQD 176
Query: 177 -GGP--------------LGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAM 220
P LG +P YPGG F +PLG D ++ +LK+KE+KNGRLAM
Sbjct: 177 WAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAM 236
Query: 221 FSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
++ G+FVQA+VTG GP +NL DHL DPV+NN
Sbjct: 237 LAILGYFVQALVTGVGPYQNLLDHLTDPVHNN 268
>gi|110736814|dbj|BAF00366.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 273
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 119/217 (54%), Gaps = 35/217 (16%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 114
S + SYL G PGDYG+D GLS DPE F + R L E+I+ R+AMLGA G + P
Sbjct: 59 SSQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAP 117
Query: 115 ELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG 172
E+L + G+ E WF+ G I G Y + ++ ++ LMG E
Sbjct: 118 EILGKAGLIPAETALPWFQTGV-IPPAGTYTYWADN--------YTLFVLEMALMGFAEH 168
Query: 173 YRIAG----GPLGEVT------------DPLYPGGSF-DPLGLADDPEAFAELKVKEIKN 215
R+ G +G+ +P YPGG F +PLG D ++ ELK+KE+KN
Sbjct: 169 RRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKN 228
Query: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
GRLAM ++ G+F+Q +VTG GP +NL DHLA PVNNN
Sbjct: 229 GRLAMLAILGYFIQGLVTGVGPYQNLLDHLAGPVNNN 265
>gi|115448873|ref|NP_001048216.1| Os02g0764500 [Oryza sativa Japonica Group]
gi|46805727|dbj|BAD17114.1| putative light-harvesting chlorophyll-a/b protein of photosystem I
[Oryza sativa Japonica Group]
gi|113537747|dbj|BAF10130.1| Os02g0764500 [Oryza sativa Japonica Group]
gi|215694704|dbj|BAG89895.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623725|gb|EEE57857.1| hypothetical protein OsJ_08493 [Oryza sativa Japonica Group]
Length = 261
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 111/207 (53%), Gaps = 32/207 (15%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP +L G PGD+G+D GL +P + E++HCR+AM G G + +L+ +G+
Sbjct: 62 DPPPHLDGTLPGDFGFDPLGLGEEPANLKWYVQAELVHCRFAMAGVAGILATDLIRVSGI 121
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR----IAGG 178
VWF+AGA F D+ + A++ Q++LMG E R I G
Sbjct: 122 N-NLPVWFEAGATKF-----DF---------ANTTALFFVQLLLMGFAETKRYMDFINPG 166
Query: 179 PLGEV------------TDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
E + P YPGG F+PLGLA D E E K+KEIKNGRLAM +M G
Sbjct: 167 SQAEEGTFLGIEAALAGSQPGYPGGPLFNPLGLAKDIENADEAKLKEIKNGRLAMVAMLG 226
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNN 252
F VQA VT GP++NL HL+DP N N
Sbjct: 227 FIVQASVTHVGPIDNLLTHLSDPFNKN 253
>gi|255585090|ref|XP_002533251.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223526931|gb|EEF29136.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 244
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 105/197 (53%), Gaps = 21/197 (10%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 51 GQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEAL--- 107
Query: 121 GVKFGEAVWFKAGAQIFSEGGL-DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W KA GG YLG P + ++ I + + + VE R
Sbjct: 108 ----GLGNWVKAQEWAAIPGGQATYLGQP--VPWGTLPTILVIEFLAIAFVEHQR----- 156
Query: 180 LGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGK 235
DP YPGG+FDPLG + DP F E KVKEIKNGRLA+ + G V Q+ G
Sbjct: 157 -SMEKDPEKKKYPGGAFDPLGYSKDPAKFHEYKVKEIKNGRLALLAFVGICVQQSAYPGT 215
Query: 236 GPLENLADHLADPVNNN 252
GPLENLA HLADP +NN
Sbjct: 216 GPLENLATHLADPWHNN 232
>gi|116784586|gb|ABK23400.1| unknown [Picea sitchensis]
gi|148907739|gb|ABR16996.1| unknown [Picea sitchensis]
gi|224284102|gb|ACN39788.1| unknown [Picea sitchensis]
Length = 247
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 109/195 (55%), Gaps = 17/195 (8%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P P++L G PGD+G+D GL PE + +E E+IHCRWAML G + PE L
Sbjct: 53 GQPRPAHLDGSAPGDFGFDPLGLGVVPENLERYKESELIHCRWAMLAVPGVLIPEAL--- 109
Query: 121 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLI-HAQSILAIWACQVVLMGAVEGYRIAGG 178
G W +A GG YLG P + IL+I+ + M E R G
Sbjct: 110 ----GLGNWVEAQKWAAIPGGQATYLGVPVPWGYFPIILSIFFLK---MAFAESQR-NGE 161
Query: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT-GKGP 237
P ++ YPGG+FDPLG + DP F E KVKEIKNGRLA+ + GF VQA G GP
Sbjct: 162 P--DLEKRKYPGGAFDPLGFSKDPAKFEEYKVKEIKNGRLALLAFVGFCVQASANPGTGP 219
Query: 238 LENLADHLADPVNNN 252
LENLA HL+DP + N
Sbjct: 220 LENLATHLSDPWHKN 234
>gi|255646873|gb|ACU23907.1| unknown [Glycine max]
Length = 276
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 119/212 (56%), Gaps = 35/212 (16%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
SYL G PGDYG+D GLS DPE F + + L E+I+ R+AMLGA+G + PE+L +
Sbjct: 67 SYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAPEILGK 125
Query: 120 NGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA- 176
G+ E WF+ G +F G + + ++ ++ LMG E R
Sbjct: 126 AGLIPQETALPWFRTG--VFPPAG-------TYNYWADSYTLFVFEMALMGFAEHRRFQD 176
Query: 177 -GGP--------------LGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAM 220
P LG +P YPGG F +PLG D ++ +LK+KE+KNGRLAM
Sbjct: 177 WAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAM 236
Query: 221 FSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
++ G+FV+A+VTG GP +NL DHLADPV+NN
Sbjct: 237 LAILGYFVRALVTGVGPYQNLLDHLADPVHNN 268
>gi|21554335|gb|AAM63442.1| PSI type III chlorophyll a/b-binding protein, putative [Arabidopsis
thaliana]
Length = 273
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 116/215 (53%), Gaps = 31/215 (14%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 114
S + SYL G PGDYG+D GLS DPE F + R L E+I+ R+AMLGA G + P
Sbjct: 59 SSQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAP 117
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 174
E+L + G+ E + G + + ++ ++ LMG E R
Sbjct: 118 EILGKAGLIPAETALPXXQTGVIPPAG-------TYTYWADNYTLFVLEMALMGFAEHRR 170
Query: 175 IAG----GPLGEVT------------DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGR 217
+ G +G+ +P YPGG F +PLG D ++ ELK+KE+KNGR
Sbjct: 171 LQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGR 230
Query: 218 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
LAM ++ G+F+Q +VTG GP +NL DHLADPVNNN
Sbjct: 231 LAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN 265
>gi|116784661|gb|ABK23427.1| unknown [Picea sitchensis]
gi|116785117|gb|ABK23601.1| unknown [Picea sitchensis]
Length = 247
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 105/194 (54%), Gaps = 15/194 (7%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P P +L G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 53 GQPRPPHLDGSAPGDFGFDPLRLGVVPENLERYKESELIHCRWAMLAVPGVLIPEAL--- 109
Query: 121 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W +A G YLG P + + I A + + + VE R G P
Sbjct: 110 ----GLGNWVEAQKWAAIPGNQATYLGAP--VPWGYLPVILAVEFLSIAFVESQR-NGEP 162
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT-GKGPL 238
E YPGG+FDPLG + DP F E KVKEIKNGRLA+ + GF VQA G GPL
Sbjct: 163 DPEKRK--YPGGAFDPLGFSKDPAKFKEYKVKEIKNGRLALLAFVGFCVQASANPGTGPL 220
Query: 239 ENLADHLADPVNNN 252
ENLA HL+DP + N
Sbjct: 221 ENLATHLSDPWHKN 234
>gi|544700|gb|AAB29485.1| light-harvesting complex I, partial (chloroplast) [Hordeum vulgare]
Length = 221
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 105/196 (53%), Gaps = 15/196 (7%)
Query: 60 FSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
F G+P P++L G P GL+ PE F + +E E+ HCRWAML G + PE L
Sbjct: 25 FPGQPRPAHLAGSSPRGLRVRPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEAL- 83
Query: 119 RNGVKFGEAVWFKAGA-QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
G W KA +G YLGNP + ++ I A + + + E R
Sbjct: 84 ------GLGNWVKAQEWAALPDGQATYLGNP--VPWGNLPTILAIEFLAIAFAEQQRTME 135
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKG 236
+ YPGG+FDPLG + DP F ELK+KEIKNGRLAM + GF V Q+ G G
Sbjct: 136 K---DPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTG 192
Query: 237 PLENLADHLADPVNNN 252
PLENLA HLADP +NN
Sbjct: 193 PLENLATHLADPWHNN 208
>gi|116794024|gb|ABK26977.1| unknown [Picea sitchensis]
Length = 247
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 105/194 (54%), Gaps = 15/194 (7%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P P +L G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 53 GQPRPPHLDGSAPGDFGFDPLRLGVVPENLERYKESELIHCRWAMLAVPGVLIPEAL--- 109
Query: 121 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W +A G YLG P + + I A + + + VE R G P
Sbjct: 110 ----GLGNWVEAQKWAAIPGNQATYLGAP--VPWGYLPVILAVEFLSIAFVESQR-NGEP 162
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT-GKGPL 238
E YPGG+FDPLG + DP F E KVKEIKNGRLA+ + GF VQA G GPL
Sbjct: 163 DPEKRK--YPGGAFDPLGFSKDPAKFKEYKVKEIKNGRLALLAFVGFCVQASANPGTGPL 220
Query: 239 ENLADHLADPVNNN 252
ENLA HL+DP + N
Sbjct: 221 ENLATHLSDPWHKN 234
>gi|388508808|gb|AFK42470.1| unknown [Lotus japonicus]
Length = 259
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 122/241 (50%), Gaps = 39/241 (16%)
Query: 36 KTGSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
K G V P PDR + F G PP +L G PGD+G+D GL +DPE
Sbjct: 40 KKGVSDVCEPLP---PDRPLW---FPGSSPPEWLDGSLPGDFGFDPIGLGSDPELLKWLA 93
Query: 95 ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
+ E++H RWAMLG G + PELL + G W++AG Q +Y +P+
Sbjct: 94 QAELMHARWAMLGVSGILIPELLEKMGY-VENYSWYEAGTQ-------EYFADPT----- 140
Query: 155 SILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPL------------YPGGS-FDPLGLA 199
++ Q+ LMG VEG R A P +P YPGG FDP+
Sbjct: 141 ---TLFIVQLALMGWVEGRRWADLVNPGSVDIEPKLPNRPNPKPDVGYPGGLWFDPMMWG 197
Query: 200 D-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT 258
PE L+ KEIKNGRLAM + GF+ QAI TG+GP+ENL HLADP + N ++ T
Sbjct: 198 RGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGQGPIENLMAHLADPGHCNIFSAFT 257
Query: 259 N 259
+
Sbjct: 258 S 258
>gi|302142798|emb|CBI20093.3| unnamed protein product [Vitis vinifera]
Length = 84
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/125 (60%), Positives = 76/125 (60%), Gaps = 48/125 (38%)
Query: 140 GGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 199
GGLDYLGNP+L GYRI GGPLGEV
Sbjct: 8 GGLDYLGNPNL---------------------GYRIGGGPLGEV---------------- 30
Query: 200 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 259
KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN
Sbjct: 31 -----------KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 79
Query: 260 FVPGK 264
FVPGK
Sbjct: 80 FVPGK 84
>gi|218191630|gb|EEC74057.1| hypothetical protein OsI_09055 [Oryza sativa Indica Group]
Length = 261
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 110/207 (53%), Gaps = 32/207 (15%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP +L G PGD+G+D GL +P + E++HCR+AM G G + + + +G+
Sbjct: 62 DPPPHLDGTLPGDFGFDPLGLGEEPANLKWYVQAELVHCRFAMAGVAGILATDFIRVSGI 121
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR----IAGG 178
VWF+AGA F D+ + A++ Q++LMG E R I G
Sbjct: 122 N-NLPVWFEAGATKF-----DF---------ANTTALFFVQLLLMGFAETKRYMDFINPG 166
Query: 179 PLGEV------------TDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
E + P YPGG F+PLGLA D E E K+KEIKNGRLAM +M G
Sbjct: 167 SQAEEGTFLGIEAALAGSQPGYPGGPLFNPLGLAKDIENADEAKLKEIKNGRLAMVAMLG 226
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNN 252
F VQA VT GP++NL HL+DP N N
Sbjct: 227 FIVQASVTHVGPIDNLLTHLSDPFNKN 253
>gi|302824061|ref|XP_002993677.1| light harvesting complex [Selaginella moellendorffii]
gi|300138500|gb|EFJ05266.1| light harvesting complex [Selaginella moellendorffii]
Length = 281
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 112/217 (51%), Gaps = 36/217 (16%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 114
S + SYL G PGDYG+D GLS DP F L E+I+ R+AMLGA G + P
Sbjct: 65 SSQSLSYLDGTLPGDYGFDPLGLS-DPAGAGNFMTPNWLSYAEIINGRYAMLGAAGAIAP 123
Query: 115 ELLARNGVKFGEA--VWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVE 171
E+ + G+ E VWFK G +F G +Y +P ++ ++ LMG E
Sbjct: 124 EIFGKIGIIPQETAVVWFKTG--VFPPAGTYNYWADP--------YTLFFLEMALMGFAE 173
Query: 172 GYRIAG----------------GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 215
R LG DP YPGG F+P G D ++ LK+KE+KN
Sbjct: 174 HRRAQDFYKPGSMGKQYFLGFEKYLGGSGDPAYPGGIFNPFGFGKDEKSMRTLKIKEVKN 233
Query: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
GRLAM ++ G+F+QA TG GP +NL DHLADP NN
Sbjct: 234 GRLAMLAILGYFIQAPFTGVGPFQNLLDHLADPFANN 270
>gi|302816085|ref|XP_002989722.1| light-harvesting complex [Selaginella moellendorffii]
gi|300142499|gb|EFJ09199.1| light-harvesting complex [Selaginella moellendorffii]
Length = 281
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 112/217 (51%), Gaps = 36/217 (16%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFP 114
S + SYL G PGDYG+D GLS DP F L E+I+ R+AMLGA G + P
Sbjct: 65 SSQSLSYLDGTLPGDYGFDPLGLS-DPAGAGNFMTPNWLSYAEIINGRYAMLGAAGAIAP 123
Query: 115 ELLARNGV--KFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVE 171
E+ + G+ + VWFK G +F G +Y +P ++ ++ LMG E
Sbjct: 124 EIFGKIGIIPQQTAVVWFKTG--VFPPAGTYNYWADP--------YTLFFLEMALMGFAE 173
Query: 172 GYRIAG----------------GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 215
R LG DP YPGG F+P G D ++ LK+KE+KN
Sbjct: 174 HRRAQDYYKPGSMGKQYFLGFEKYLGGSGDPAYPGGIFNPFGFGKDEKSMRTLKIKEVKN 233
Query: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
GRLAM ++ G+F+QA TG GP +NL DHLADP NN
Sbjct: 234 GRLAMLAILGYFIQAPFTGVGPFQNLLDHLADPFANN 270
>gi|356530445|ref|XP_003533791.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Glycine max]
Length = 260
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 122/239 (51%), Gaps = 36/239 (15%)
Query: 38 GSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
+K VS+ PDR + F G PP +L G PGD+G+D GL +DPE +
Sbjct: 41 ATKGVSAVCEPLPPDRPLW---FPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQA 97
Query: 97 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 156
E++H RWAML G + PELL R G W+ AG + +Y +P+
Sbjct: 98 ELMHSRWAMLAVFGILVPELLERIGY-IENFSWYDAGTR-------EYFVDPT------- 142
Query: 157 LAIWACQVVLMGAVEGYRIAG----------GPLGEVTDPL----YPGGS-FDPLGLAD- 200
++ Q+ LMG VEG R A + VT+P YPGG FDP+
Sbjct: 143 -TLFVVQMGLMGWVEGRRWADIVNPGSVDIEPKVPHVTNPKPDVGYPGGLWFDPMMWGRG 201
Query: 201 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 259
PE L+ KEIKNGRLAM + GF+ QAI TG+GP+ENL HLADP + N ++ T
Sbjct: 202 SPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHLADPGHCNIFSAFTR 260
>gi|4139222|gb|AAD03734.1| light harvesting complex I protein precursor [Chlamydomonas
reinhardtii]
gi|40714519|dbj|BAD06923.1| light-harvesting chlorophyll-a/b protein of photosystem I
[Chlamydomonas reinhardtii]
Length = 228
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 124/254 (48%), Gaps = 33/254 (12%)
Query: 6 MALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPP 65
MALS + A AP G +G R++ GS+ W P S + P
Sbjct: 1 MALSMRTL-SARTAAPRG---FSGRRVAAVSNGSRVTMKAGNWL---------PGS-DAP 46
Query: 66 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 125
++L + PG+YG+D L +P + + E EVIH RWAMLG G + ELL G
Sbjct: 47 AWLPDDLPGNYGFDPLSLGKEPASLKRFTESEVIHGRWAMLGVAGSLAVELL-------G 99
Query: 126 EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTD 185
W+ A + G + G ++LA + V M A EG R G+
Sbjct: 100 YGNWYDAPLWAVNGGKATWFGIEVPFDLNALLAF---EFVAMAAAEGQR------GDAGG 150
Query: 186 PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 245
+YPGG+FDPLG A D ELK+KEIKNGRLAM + GF Q TGKGP+ L +HL
Sbjct: 151 VVYPGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGFVAQHAATGKGPIAALGEHL 210
Query: 246 ADPVNNNAWAYATN 259
A+P N +ATN
Sbjct: 211 ANPWGAN---FATN 221
>gi|18125|emb|CAA46235.1| light harvesting complex protein I-20 [Chlamydomonas reinhardtii]
Length = 224
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 104/197 (52%), Gaps = 19/197 (9%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+ P++L + PG+YG+D L +P + + E EVIH RWAMLG G + ELL
Sbjct: 40 DAPAWLPDDLPGNYGFDPLSLGKEPASLKRFTESEVIHGRWAMLGVAGSLAVELL----- 94
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 182
G W+ A + G + G ++LA + V M A EG R G+
Sbjct: 95 --GYGNWYDAPLWAVNGGKATWFGIEVPFDLNALLAF---EFVAMAAAEGQR------GD 143
Query: 183 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 242
+YPGG+FDPLG A D ELK+KEIKNGRLAM + GF Q TGKGP+ L
Sbjct: 144 AGGVVYPGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGFVAQHAATGKGPIAALG 203
Query: 243 DHLADPVNNNAWAYATN 259
+HLA+P N +ATN
Sbjct: 204 EHLANPWGAN---FATN 217
>gi|149242541|pdb|2O01|2 Chain 2, The Structure Of A Plant Photosystem I Supercomplex At 3.4
Angstrom Resolution
Length = 186
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 107/200 (53%), Gaps = 32/200 (16%)
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
P +L G PGD+G+D GLS+DPE+ N + E++H RWAMLGA G PE L + G+
Sbjct: 1 PEWLDGSLPGDFGFDPLGLSSDPESLRWNVQAELVHSRWAMLGAAGIFIPEFLTKLGI-L 59
Query: 125 GEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGE 182
W+ AG Q +Y + + ++ ++V +G EG R A P
Sbjct: 60 NTPSWYTAGEQ-------EYFTDTT--------TLFIVELVFIGWAEGRRWADILNPGCV 104
Query: 183 VTDPL------------YPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFV 228
TDP+ YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G +
Sbjct: 105 NTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSASPQKLKELRTKEIKNGRLAMLAVMGAWF 164
Query: 229 QAIVTGKGPLENLADHLADP 248
Q I TG GP++NL HLADP
Sbjct: 165 QHIYTGTGPIDNLFAHLADP 184
>gi|268612159|pdb|2WSC|2 Chain 2, Improved Model Of Plant Photosystem I
gi|268612177|pdb|2WSE|2 Chain 2, Improved Model Of Plant Photosystem I
gi|268612195|pdb|2WSF|2 Chain 2, Improved Model Of Plant Photosystem I
Length = 269
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 114/216 (52%), Gaps = 37/216 (17%)
Query: 51 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 109
PDR + F G PP +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA
Sbjct: 62 PDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHSRWAMLGAA 118
Query: 110 GCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
G PE L + G+ W+ AG Q +Y + + ++ ++V +G
Sbjct: 119 GIFIPEFLTKLGI-LNTPSWYTAGEQ-------EYFTDTT--------TLFIVELVFIGW 162
Query: 170 VEGYRIAG--GPLGEVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEI 213
EG R A P TDP+ YPGG FDPLG P+ EL+ KEI
Sbjct: 163 AEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSASPQKLKELRTKEI 222
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENL-ADHLADP 248
KNGRLAM ++ G + Q I TG GP++NL A HLADP
Sbjct: 223 KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAAHLADP 258
>gi|124388816|gb|ABN10530.1| Lhca5 protein [Gentiana lutea]
Length = 272
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 108/202 (53%), Gaps = 31/202 (15%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP YL G GD+G+D GL DPE+ + E++H R+AM G G +F +LL G+
Sbjct: 72 DPPPYLDGTLAGDFGFDPLGLGEDPESLKWYVQAELVHSRFAMAGVAGILFTDLLRTTGL 131
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG----G 178
VW++AGA F + ++ Q++LMG VE R G
Sbjct: 132 S-NLPVWYEAGATKF--------------QFANTTTLFIVQMLLMGFVETKRYMDFKNPG 176
Query: 179 PLGEVT-----------DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
GE + +P YPGG +PLG+A D + E K+KEIKNGRLAM ++ G
Sbjct: 177 SQGEASFFGLEAALEGLEPGYPGGPILNPLGIAKDIKNAPEWKLKEIKNGRLAMVAILGI 236
Query: 227 FVQAIVTGKGPLENLADHLADP 248
FVQA VT GPLENL +HL+DP
Sbjct: 237 FVQASVTHVGPLENLVEHLSDP 258
>gi|187609486|gb|ACD13266.1| chlorophyll a/b binding protein precursor [Phyllostachys
iridescens]
Length = 205
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 105/196 (53%), Gaps = 15/196 (7%)
Query: 60 FSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
F G+P P +L G PGD+G+D GL+ PE + +E EV HCRWAML G + PE L
Sbjct: 20 FPGQPRPVHLDGSSPGDFGFDPLGLATVPENSERFKESEVYHCRWAMLCVPGVLVPEAL- 78
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGL-DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
G W KA GG Y G P + ++ I A + + + E R
Sbjct: 79 ------GLGNWVKAQEWAAVPGGQATYFGVP--VPWGNLPTILAIEFLAIAFAEHQRTME 130
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKG 236
+ YPGG+FDPLG + DP E K+KEI+NGRLAM + GF V Q+ G G
Sbjct: 131 K---DPEKKKYPGGAFDPLGFSKDPVKLEEYKLKEIRNGRLAMLAFVGFCVQQSPYPGTG 187
Query: 237 PLENLADHLADPVNNN 252
PLENLA HLADP +NN
Sbjct: 188 PLENLASHLADPWHNN 203
>gi|424512849|emb|CCO66433.1| predicted protein [Bathycoccus prasinos]
Length = 286
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 123/228 (53%), Gaps = 39/228 (17%)
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGAL 109
Y+ S + SYL G PGDYG+D GLS DPE F L EVIH RWAMLG
Sbjct: 66 YMLGVSDQSLSYLDGTLPGDYGFDPLGLS-DPEGAGGFINPGWLAYAEVIHGRWAMLGVA 124
Query: 110 GCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 169
G PE + VWFK G I ++G D+ P+ A++ V +M
Sbjct: 125 GATAPETMKGFIPDSTAVVWFKNGI-IPAQGSYDFWAPPT--------ALFWVMVCMMNF 175
Query: 170 VE----------GYR----IAG--GPLGEVTDPLYPGGSFDPLGLA-DDPEAFAELKVKE 212
VE G+R +AG +G +P YPGGSF+P+G+ +D +A +KVKE
Sbjct: 176 VEINRLTEYANPGFRTKQSLAGLEKGMGGTGNPAYPGGSFNPMGMGKNDMDA---MKVKE 232
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
IKNGRLAM + FG VQAI+TG+GP++NL DH+ DP +N TNF
Sbjct: 233 IKNGRLAMMAFFGIMVQAIITGEGPVKNLTDHVTDPFAHN---LLTNF 277
>gi|225444667|ref|XP_002277280.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic [Vitis
vinifera]
gi|297738533|emb|CBI27778.3| unnamed protein product [Vitis vinifera]
Length = 259
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 123/246 (50%), Gaps = 36/246 (14%)
Query: 30 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 89
GR+ R +K VSS PDR + PP +L G PGD+G+D GL +DPE
Sbjct: 33 GRV--RLNATKGVSSVCEPLPPDRPLWFP--GSSPPEWLDGSLPGDFGFDPLGLGSDPEL 88
Query: 90 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 149
+ E++H RWAML G + PE L R G W+ AGAQ ++ +P+
Sbjct: 89 LRWFAQAELMHSRWAMLAVAGILIPECLERLGF-IENFSWYDAGAQ-------EFFADPT 140
Query: 150 LIHAQSILAIWACQVVLMGAVEGYRIA-----GGPLGEVTDPL---------YPGGS-FD 194
++ Q+ LMG VEG R A G ++T P YPGG FD
Sbjct: 141 --------TLFVVQLALMGWVEGRRWADLINPGCVDIQLTFPNKAKPKPDVGYPGGLWFD 192
Query: 195 PLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
P PE L+ KEIKNGRLAM + GF QAI TG+GP+ENL H+ADP + N
Sbjct: 193 PFMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGEGPIENLMAHIADPGHCNV 252
Query: 254 WAYATN 259
++ T+
Sbjct: 253 FSAFTS 258
>gi|7271945|gb|AAF44702.1|AF241524_1 chlorophyll a/b-binding protein type I [Asarina barclaiana]
Length = 169
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 102/184 (55%), Gaps = 20/184 (10%)
Query: 74 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 133
GD+G+D GL PE + +E E+IHCRWAML G + PE L FG W KA
Sbjct: 1 GDFGFDPLGLGEVPENLERYKESELIHCRWAMLAVPGILVPEALG-----FGN--WVKAQ 53
Query: 134 AQIFSEGGL-DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP---LYP 189
GG YLGNP + ++ I + + + VE R DP YP
Sbjct: 54 EWAAVPGGQATYLGNP--VPWGTLPTILVIEFLAIAFVEHQR------SMEKDPEKRKYP 105
Query: 190 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADP 248
GG+FDPLG + DP+ F ELKVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP
Sbjct: 106 GGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADP 165
Query: 249 VNNN 252
+N
Sbjct: 166 WHNK 169
>gi|225580691|gb|ACN94453.1| photosystem I light-harvesting cholrophyll-a/b protein 2
[Dunaliella salina]
Length = 228
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 117/227 (51%), Gaps = 18/227 (7%)
Query: 35 RKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
++ ++SV S R P S EP YL + PG++ +D L + T + R
Sbjct: 15 KQAVNRSVVRPSIRVQAQRAGNFAPGS-EPKEYLN-DLPGNFNFDPLELGKEKGTLQRYR 72
Query: 95 ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
E E+IHCRWAMLGA GC+ E+L G W+ A + + G
Sbjct: 73 EAELIHCRWAMLGAAGCLAVEVL-------GLGNWYDAPLWAVTGDKPTWFGIEVPFDIA 125
Query: 155 SILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 214
+IL + +VV M EG R ++ LYPGG+FDPLG + DP++F + K+KE+K
Sbjct: 126 TILGV---EVVAMAVAEGLRNDNQ---DMEKRLYPGGAFDPLGFSKDPKSFEDKKLKELK 179
Query: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV 261
NGRLAM + GF Q TGK LE L DHL+ P NN +ATN V
Sbjct: 180 NGRLAMVACLGFAGQHAATGKPILEALGDHLSSPFFNN---FATNGV 223
>gi|356556398|ref|XP_003546513.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Glycine max]
Length = 260
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 123/239 (51%), Gaps = 36/239 (15%)
Query: 38 GSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
+K VS+ PDR + F G PP +L G PGD+G+D GL +DPE +
Sbjct: 41 ATKGVSAVCEPLPPDRPLW---FPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQA 97
Query: 97 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 156
E++H RWAML G + PELL + G W+ AGA+ +Y +P+
Sbjct: 98 ELMHARWAMLAVFGILVPELLEKIGY-IENFSWYDAGAR-------EYFVDPT------- 142
Query: 157 LAIWACQVVLMGAVEGYRIAG----------GPLGEVTDPL----YPGGS-FDPLGLAD- 200
++ Q+ LMG VEG R A + +T+P YPGG FDP+
Sbjct: 143 -TLFVVQMGLMGWVEGRRWADMVNPGSVDIEPKVPHITNPKPDVGYPGGLWFDPMMWGRG 201
Query: 201 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 259
PE L+ KEIKNGRLAM + GF+ QAI TG+GP+ENL HLADP + N ++ T
Sbjct: 202 SPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHLADPGHCNIFSAFTR 260
>gi|358249066|ref|NP_001239987.1| uncharacterized protein LOC100794944 [Glycine max]
gi|255635762|gb|ACU18230.1| unknown [Glycine max]
Length = 267
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 109/207 (52%), Gaps = 20/207 (9%)
Query: 51 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 109
PDR + F G PP +L G PGD+G+D GL +DPE+ N + E++HCRWAMLGA
Sbjct: 60 PDRPLW---FPGSTPPPWLDGTLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAA 116
Query: 110 GCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI-WA-----CQ 163
G PE L + GV W+ AG L+Y + + + + I WA
Sbjct: 117 GIFIPEFLTKIGV-LNTPSWYSAGE-------LEYFTDTTTLFIVELFFIGWAEGRRWAD 168
Query: 164 VVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMF 221
++ G V I TD YPGG FDPLG P+ +L+ KEIKNGRLAM
Sbjct: 169 IIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPQKIKDLRTKEIKNGRLAML 228
Query: 222 SMFGFFVQAIVTGKGPLENLADHLADP 248
++ G + Q I T GP++NL HLADP
Sbjct: 229 AVMGAWFQHIYTATGPIDNLFAHLADP 255
>gi|398313941|emb|CCI55397.1| PSI antenna protein Lhca2 [Marchantia polymorpha]
Length = 267
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 129/267 (48%), Gaps = 45/267 (16%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSV---SSGSPWYGPDRVKYL 57
+A ST A + G AV A G L + ++S S SV ++ P + P
Sbjct: 14 IAPSTSATKAVSSGSAVKAAFFGKTLRSA-KVSAVSKASFSVRAQATERPLWFPGSTA-- 70
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
P +L G PGD+G+D GL ++PE + E++HCRWAMLGA G PELL
Sbjct: 71 -------PEWLDGSLPGDFGFDPLGLGSEPELLKWFVQAEIVHCRWAMLGAAGIFIPELL 123
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
+ G+ W+ AG Q + Q+ L I +++ MG EG R A
Sbjct: 124 TKIGI-LNTPSWYTAGEQTY-------------FADQTTLFI--VELLFMGWAEGRRWAD 167
Query: 178 --GPLGEVTDPL------------YPGGS-FDPLGL-ADDPEAFAELKVKEIKNGRLAMF 221
P TDP+ YPGG FDPLG A EL+ KEIKNGRLAM
Sbjct: 168 ILKPGSVNTDPVFPNNKLTGTDVGYPGGFWFDPLGWGAGGAAKVKELRTKEIKNGRLAML 227
Query: 222 SMFGFFVQAIVTGKGPLENLADHLADP 248
++ G + QA+ TG GP++NL HLADP
Sbjct: 228 AVMGAWFQAVYTGTGPIDNLFAHLADP 254
>gi|147795581|emb|CAN69989.1| hypothetical protein VITISV_024400 [Vitis vinifera]
Length = 229
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 125/247 (50%), Gaps = 38/247 (15%)
Query: 30 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPE 88
GR+ R +K VSS PDR + F G PP +L G PGD+G+D GL +DPE
Sbjct: 3 GRV--RLNATKGVSSVCEPLPPDRPLW---FPGSSPPEWLDGSLPGDFGFDPLGLGSDPE 57
Query: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 148
+ E++H RWAML G + PE L R G W+ AGAQ ++ +P
Sbjct: 58 LLRWFAQAELMHSRWAMLAVAGILIPECLERLGF-IENFSWYDAGAQ-------EFFADP 109
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYRIA-----GGPLGEVTDPL---------YPGGS-F 193
+ ++ Q+ LMG VEG R A G ++T P YPGG F
Sbjct: 110 T--------TLFVVQLALMGWVEGRRWADLINPGCVDIQLTFPNKAKPKPDVGYPGGLWF 161
Query: 194 DPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
DP PE L+ KEIKNGRLAM + GF QAI TG+GP+ENL H+ADP + N
Sbjct: 162 DPFMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGEGPIENLMAHIADPGHCN 221
Query: 253 AWAYATN 259
++ T+
Sbjct: 222 VFSAFTS 228
>gi|87313223|gb|ABD37908.1| light-harvesting chlorophyll-a/b binding protein Lhca6
[Chlamydomonas incerta]
Length = 192
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 104/197 (52%), Gaps = 19/197 (9%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+ P++L + PG+YG+D L DP + + E EVIH RWAMLG G + ELL
Sbjct: 8 DAPAWLPEDLPGNYGFDPLSLGKDPASLKRFTESEVIHGRWAMLGVAGSLAVELL----- 62
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 182
G W+ A + G + G ++LA + V M A EG R G+
Sbjct: 63 --GYGNWYDAPLWAVNGGKATWFGIDVPFDLNTLLAF---EFVAMAAAEGQR------GD 111
Query: 183 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 242
+YPGG+FDPLG A D ELK+KE+KNGRLAM + GF Q TGKGP+ L
Sbjct: 112 AGGVVYPGGAFDPLGFAKDASKSGELKLKEVKNGRLAMVAFLGFVAQHAATGKGPIAALG 171
Query: 243 DHLADPVNNNAWAYATN 259
+HL++P N +ATN
Sbjct: 172 EHLSNPWGAN---FATN 185
>gi|302851787|ref|XP_002957416.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis]
gi|300257220|gb|EFJ41471.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis]
Length = 241
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP++L G GDYG+D L +P+T + E++H R+AMLGA G + + A+ G+
Sbjct: 39 PPAHLDGSLAGDYGFDPLFLGQEPQTLKWYVQAELVHGRFAMLGAAGIILTSIGAKVGLG 98
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 183
F E W+ AG + + +D+ P+L+ Q L WA G
Sbjct: 99 FPE--WYDAGKVVVEKNNIDF---PTLLITQLYLMGWAETKRWYDFKNPGSQGDGSFLGF 153
Query: 184 TDPL------YPGGSF-DPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
TD YPGG F DP+GL+ D + + E K KEIKNGRLAM + GF Q TGK
Sbjct: 154 TDEFKGLENGYPGGRFFDPMGLSRGDADKYKEYKQKEIKNGRLAMIACLGFAAQYAATGK 213
Query: 236 GPLENLADHLADPVNNNAWAYATNFV 261
GPL+NLADHLADP + N +ATN V
Sbjct: 214 GPLDNLADHLADPNHVN---FATNGV 236
>gi|20788|emb|CAA41404.1| Type 1 chlorophyll a /b-binding protein [Pinus sylvestris]
Length = 246
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 104/194 (53%), Gaps = 15/194 (7%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P P +L G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 52 GQPRPPHLDGSAPGDFGFDPLRLGVIPENLERYKESELIHCRWAMLAVPGMLIPEAL--- 108
Query: 121 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W +A G Y G P + + + A + + + VE R G P
Sbjct: 109 ----GLGNWVEAQKWAAIPGSQATYFGVP--VPWGYLPIVLAVEFLAIAFVESQR-NGEP 161
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT-GKGPL 238
E YPGG+FDPLG + DP F E KVKEIKNGRLA+ + GF VQA G GPL
Sbjct: 162 DPEKRK--YPGGAFDPLGFSKDPVKFKEYKVKEIKNGRLALLAFVGFCVQASANPGTGPL 219
Query: 239 ENLADHLADPVNNN 252
ENLA HL+DP + N
Sbjct: 220 ENLATHLSDPWHRN 233
>gi|145079846|tpg|DAA05942.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca4 [Micromonas sp. CCMP490]
Length = 250
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 107/206 (51%), Gaps = 16/206 (7%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP +L G PGDYG+D GL D ++ E+ H RWAMLG G PEL+ V+
Sbjct: 51 PPKHLDGTMPGDYGFDPLGLGEDKVALEWYKQAELQHARWAMLGVTGMAAPELIQNPFVE 110
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNP-SLIHAQSILAIWA-----CQVVLMGAVEGYRIAG 177
W +A +G Y+ +P +L Q + WA + G + + G
Sbjct: 111 GAMPNWAEAP---LWDG---YMASPNTLFVVQMFMMNWAEVRRWQDMKNPGTMNEDPLTG 164
Query: 178 GPLGEV-TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
G+ TD YP G FDP+G+A DPE LKVKEI NGRLAM ++ G +Q TG G
Sbjct: 165 ANKGDTNTDVGYPKGLFDPMGMAKDPEKVKVLKVKEIANGRLAMVAVMGCIIQNEATGVG 224
Query: 237 PLENLADHLADPVNNNAWAYATNFVP 262
P+ NL HLADP +N + TNFVP
Sbjct: 225 PIANLKAHLADPAHNTIF---TNFVP 247
>gi|168011208|ref|XP_001758295.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690330|gb|EDQ76697.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 270
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 106/198 (53%), Gaps = 16/198 (8%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
E P +L G PGDYG+D L+A+P + E++HCRWAMLGA G PELL + G+
Sbjct: 73 EAPKWLDGSLPGDYGFDPLDLAAEPGRLNWMVQAELVHCRWAMLGAAGIFIPELLTKIGI 132
Query: 123 KFGEAVWFKAG-AQIFSEGGLDYLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIA 176
W+KAG A F++ G +L + +L WA + G+V I
Sbjct: 133 -LNTPSWYKAGDATYFADQG-------TLFIVELLLMAWAESRRWADIARPGSVNTDPIF 184
Query: 177 GGPLGEVTDPLYPGGS-FDPLGLADDPE-AFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
TD YPGG FDPLG E E++ KE+KNGRLAM ++ G FVQA VT
Sbjct: 185 PNNKLTGTDVGYPGGLWFDPLGWGSGSEDKLKEIRTKEVKNGRLAMLAVLGAFVQANVTH 244
Query: 235 KGPLENLADHLADPVNNN 252
GP++NL HLADP +
Sbjct: 245 VGPIDNLFAHLADPYHTT 262
>gi|357465507|ref|XP_003603038.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355492086|gb|AES73289.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 267
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 113/198 (57%), Gaps = 22/198 (11%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP+YL G PGD+G+D GL DPE+ + E++H R+AMLG LG + +LL GV
Sbjct: 66 DPPTYLDGTLPGDFGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVLGILVTDLLRVAGV 125
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLM-----------GAVE 171
+WF+AGA + ++ +L+ Q +L +A M G+
Sbjct: 126 N-SIPIWFEAGAVKY-----EFANTGTLVVVQLLLMGYAETRRYMDFVSPGSQAKEGSFF 179
Query: 172 GYRIAGGPLGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
G + G L +P YPGG +PLGLA D ++ E K+KEIKNGRLAM ++ G FVQA
Sbjct: 180 GLEASLGGL----EPGYPGGPLLNPLGLAKDIKSAREWKLKEIKNGRLAMVAILGIFVQA 235
Query: 231 IVTGKGPLENLADHLADP 248
VT GP++NL +HL++P
Sbjct: 236 SVTHVGPIDNLVEHLSNP 253
>gi|168041250|ref|XP_001773105.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675652|gb|EDQ62145.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 241
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 103/190 (54%), Gaps = 15/190 (7%)
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
PSYL G PGD+G+D GL PE + +E E+IH RWAML G + PE L
Sbjct: 54 PSYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHARWAMLAVPGVLIPEAL------- 106
Query: 125 GEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 183
G W A + GG YLGNP + ++ I A + + + E R G P E
Sbjct: 107 GYGNWVSAQKWAATPGGQATYLGNP--VPWGNLPVILAIEFLAIAFAESQR-NGEPDPEK 163
Query: 184 TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLA 242
YPGG+FDPLG + ELK+KEIKNGRLA+ + GF VQAI G GPLENL
Sbjct: 164 RK--YPGGAFDPLGFSKGAN-LEELKLKEIKNGRLALVAFLGFAVQAIAYPGTGPLENLK 220
Query: 243 DHLADPVNNN 252
HLADP +N
Sbjct: 221 THLADPWHNT 230
>gi|302830496|ref|XP_002946814.1| hypothetical protein VOLCADRAFT_45832 [Volvox carteri f.
nagariensis]
gi|300267858|gb|EFJ52040.1| hypothetical protein VOLCADRAFT_45832 [Volvox carteri f.
nagariensis]
Length = 227
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 115/225 (51%), Gaps = 38/225 (16%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET-----FAKNREL---EVIHCRWAMLGALGCVFPELL 117
SYL G PGD+G+D GL DP + F R L E++H RWAMLGA GC+ PE L
Sbjct: 12 SYLDGTLPGDFGFDPLGLF-DPSSGGSAGFLSQRWLHTAELMHARWAMLGAAGCLAPEYL 70
Query: 118 ARNGV--KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR- 174
A V K +WFK G + G DY G P + ++A Q+V+MG EG R
Sbjct: 71 AHEKVIPKATGLLWFKTGFLPQASAGFDY-GLP-------LGVLFAVQMVMMGVAEGLRG 122
Query: 175 ---IAGGPL--------------GEVTDPLYPGG-SFDPLGLADDPEAFAELKVKEIKNG 216
IA G L YPGG F+PLGL + P A E++ EI++G
Sbjct: 123 AEYIAPGSLRNNKLLGLEKLIATTRAGSAAYPGGLMFNPLGLGEKPAAMREMQQAEIRHG 182
Query: 217 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV 261
RLAM + G+ QA+VTG+GP +N HL +P NN + N +
Sbjct: 183 RLAMLACLGYAAQAVVTGRGPYDNWNRHLENPEENNVLSLLGNVL 227
>gi|20790|emb|CAA41405.1| Type 1 chlorophyll a /b-binding protein [Pinus sylvestris]
Length = 207
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 104/194 (53%), Gaps = 15/194 (7%)
Query: 62 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G+P P +L G PGD+G+D L PE + +E E+IHCRWAML G + PE L
Sbjct: 13 GQPRPPHLDGSAPGDFGFDPLRLGVIPENLERYKESELIHCRWAMLAVPGMLIPEAL--- 69
Query: 121 GVKFGEAVWFKAGAQIFSEGGL-DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179
G W +A G Y G P + + + A + + + VE R G P
Sbjct: 70 ----GLGNWVEAQKWAAIPGSQATYFGVP--VPWGYLPIVLAVEFLAIAFVESQR-NGEP 122
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT-GKGPL 238
E YPGG+FDPLG + DP F E KVKEIKNGRLA+ + GF VQA G GPL
Sbjct: 123 DPEKRK--YPGGAFDPLGFSKDPVKFKEYKVKEIKNGRLALLAFVGFCVQASANPGTGPL 180
Query: 239 ENLADHLADPVNNN 252
ENLA HL+DP + N
Sbjct: 181 ENLATHLSDPWHRN 194
>gi|168057356|ref|XP_001780681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667846|gb|EDQ54465.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 208
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 110/206 (53%), Gaps = 32/206 (15%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP++L G GD+G+D GL DP+ + E++H R+AM G G +F +LL +G +
Sbjct: 11 PPAHLDGTLAGDFGFDPLGLGQDPQDLRWYVQAELVHSRFAMAGVAGILFTDLLRASG-R 69
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR----IAGGP 179
VWF+AGA F D+ +L + Q++LMG VE R + G
Sbjct: 70 TDIPVWFEAGATKF-----DFADTTTL---------FVVQLILMGFVETKRWMDIVKPGS 115
Query: 180 LG------------EVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
E + YPGG F+PLG A+DP L+ KEIKNGRLAM +M GF
Sbjct: 116 QAAEDSFFGFEAAFEGLETGYPGGPLFNPLGFANDPTKPQPLRWKEIKNGRLAMVAMVGF 175
Query: 227 FVQAIVTGKGPLENLADHLADPVNNN 252
VQA VT GP+ENL HL+DPV+N
Sbjct: 176 MVQAYVTKTGPIENLLTHLSDPVHNT 201
>gi|302851012|ref|XP_002957031.1| light-harvesting chlorophyll-a/b protein of photosystem I [Volvox
carteri f. nagariensis]
gi|300257587|gb|EFJ41833.1| light-harvesting chlorophyll-a/b protein of photosystem I [Volvox
carteri f. nagariensis]
Length = 270
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 143/285 (50%), Gaps = 47/285 (16%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVK---YL 57
M + ++F GKA A + N R+ R KS+++ DR K Y+
Sbjct: 1 MMLLNRSAQAAFSGKAARPAQA-----NRARLVCRAE-EKSIAT------VDRSKDQLYV 48
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGC 111
G S +YL G PGD+G+D GL DP F + + L EVIH RWAMLGA GC
Sbjct: 49 GA-SQSSLAYLDGTLPGDFGFDPLGL-LDPVNSGGFVEPKWLQYSEVIHGRWAMLGAAGC 106
Query: 112 VFPELLARNGV--KFGEAVWFKAGAQIFSEGGLD-YLGNPSLIHAQSILAIWACQVVLMG 168
+ PE+L G+ + VW+++G I G D Y +P I + I A Q +
Sbjct: 107 IAPEILGAAGLIPEKTNIVWYESGV-IPPAGSYDGYWADPYTIF---FIEIVAMQFAELR 162
Query: 169 AVEGYRIAGGPLGEVT------------DPLYPGGSF-DPLGLADDPEAFAELKVKEIKN 215
++ +R G +G+ DP YPGG F + L A ELK+KEIKN
Sbjct: 163 RLQDFRYPGS-MGKQYFLGLEKIFAGSGDPAYPGGPFFNLFNLGKTEAAMKELKLKEIKN 221
Query: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
GRLAM +M G+ QA +T +GP +NL DHLADPVNNN TNF
Sbjct: 222 GRLAMLAMLGYGAQATLTREGPFQNLLDHLADPVNNNIL---TNF 263
>gi|2306981|gb|AAB65793.1| photosystem I antenna protein [Oryza sativa Indica Group]
Length = 265
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 130/266 (48%), Gaps = 46/266 (17%)
Query: 9 SSSFVG-KAVNLAPSGNELSNG----GRISMRKTGSKSV--SSGSPWYGPDRVKYLGPFS 61
SSSF A+ AP + G GR+ +R+ S S S PDR + F
Sbjct: 8 SSSFTAVAALPGAPRASSFLGGAGRSGRLLLRQAESSSARASFAVRAAAPDRPIW---FP 64
Query: 62 GE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
G PP +L G PGD+G+D GL +DPE+ N + +++HCRWAMLGA G PE L +
Sbjct: 65 GSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQADLVHCRWAMLGAAGIFIPEFLTKI 124
Query: 121 GVKFGEAVWFKAGA-QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-- 177
G+ W+ AG Q F++ ++ +++L+G EG R A
Sbjct: 125 GI-LNTPSWYTAGEHQYFTD----------------TTTLFIIELILIGWAEGRRWADII 167
Query: 178 -GPLGEVTDPLYP-------------GGSFDPLGLAD-DPEAFAELKVKEIKNGRLAMFS 222
P TDP++P G DPLG PE EL+ KEIKNGR+AM +
Sbjct: 168 INPGCVNTDPIFPQQQVHGHRRGEPCGLWLDPLGWGTVSPEKIKELRTKEIKNGRVAMLA 227
Query: 223 MFGFFVQAIVTGKGPLENLADHLADP 248
+ G + QA TG GP++N H+ADP
Sbjct: 228 VMGAWFQAEHTGTGPIDNFFAHVADP 253
>gi|168060921|ref|XP_001782441.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666112|gb|EDQ52776.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 238
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 106/198 (53%), Gaps = 16/198 (8%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
E P +L G PGDYG+D L+A+P + E++HCRWAMLGA G PELL + G+
Sbjct: 22 EAPKWLDGSLPGDYGFDPLDLAAEPGRLNWMVQAELVHCRWAMLGAAGIFIPELLTKIGI 81
Query: 123 KFGEAVWFKAG-AQIFSEGGLDYLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIA 176
W+KAG A F++ G +L + +L WA + G+V I
Sbjct: 82 -LNTPSWYKAGDATYFADQG-------TLFIVELLLMAWAESRRWADIARPGSVNTDPIF 133
Query: 177 GGPLGEVTDPLYPGGS-FDPLGLADDPE-AFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
TD YPGG FDPLG E E++ KE+KNGRLAM ++ G FVQA VT
Sbjct: 134 PNNKLTGTDVGYPGGLWFDPLGWGSGSEDKLKEIRTKEVKNGRLAMLAVLGAFVQANVTH 193
Query: 235 KGPLENLADHLADPVNNN 252
GP++NL HLADP +
Sbjct: 194 VGPIDNLFAHLADPYHTT 211
>gi|145079153|tpg|DAA05901.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca6 [Acetabularia acetabulum]
Length = 201
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 106/202 (52%), Gaps = 30/202 (14%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP++L G P DYG+D L +DP+ A R+ E++HCRWAM+G G + P LL + G
Sbjct: 8 PPAHLDGSLPADYGFDPLSLGSDPDMLAWMRQAELMHCRWAMMGVAGILVPALLTKLGA- 66
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR--------- 174
VWF+AG + + A+ + + MG VE R
Sbjct: 67 MNVPVWFEAGKVANDNSSVPF------------SALLMVEFLAMGFVETKRWYDIKSPGS 114
Query: 175 IAGGPLGEVTDPL------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGF 226
G + +TD YPGG+ FDP G + E++ L+VKEI NGRLAM +M GF
Sbjct: 115 QGDGSIFGITDDFKGKSVGYPGGTFFDPFGFSKGSEESYKTLQVKEIANGRLAMVAMVGF 174
Query: 227 FVQAIVTGKGPLENLADHLADP 248
+ Q TGKGP++NL DH+ADP
Sbjct: 175 WAQYAATGKGPVDNLFDHIADP 196
>gi|398313943|emb|CCI55398.1| PSI antenna protein Lhca3 [Marchantia polymorpha]
Length = 279
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 111/212 (52%), Gaps = 35/212 (16%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPE----TFAKN--RELEVIHCRWAMLGALGCVFPELLAR 119
SYL G PGDYG+D GLS DP+ N R E+I+ R+AMLGA G + PE+ +
Sbjct: 70 SYLDGSLPGDYGFDPLGLS-DPQGAGGFIDPNWLRYAEIINGRFAMLGAAGAIAPEIFGK 128
Query: 120 NGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
G+ E WF+ G I G Y +P ++ ++ LMG E R
Sbjct: 129 IGLIPQETAIPWFQTGV-IPPLGQYSYWADP--------YTLFVLEMALMGFAEHRRAQD 179
Query: 178 ----------------GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAM 220
LG DP YPGG F+ LG D ++ +LKVKE+KNGRLAM
Sbjct: 180 YYKPGSMGKQYFLGFEKVLGGSGDPAYPGGPLFNFLGFGRDEKSMKDLKVKEVKNGRLAM 239
Query: 221 FSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
++ G+F+QAI TG GP +NL DHL+DP NNN
Sbjct: 240 LAVLGYFIQAIFTGVGPFQNLLDHLSDPANNN 271
>gi|255550389|ref|XP_002516245.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223544731|gb|EEF46247.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 297
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 123/246 (50%), Gaps = 39/246 (15%)
Query: 31 RISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPET 89
+++ K G +V P PDR + F G PP +L G PGD+G+D GL +DPE
Sbjct: 73 KLNATKGGVSTVCEPLP---PDRPLW---FPGSSPPEWLDGSLPGDFGFDPLGLGSDPEL 126
Query: 90 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 149
+ E++H RWAML G + PE L G WF AGA+ +Y +P+
Sbjct: 127 LKWFAQAELMHSRWAMLAVAGILIPEWLESLGF-IENYNWFDAGAR-------EYFADPT 178
Query: 150 LIHAQSILAIWACQVVLMGAVEGYRIAG----------GPLGEVTDPL----YPGGS-FD 194
++ Q+VLMG VEG R A L T P YPGG FD
Sbjct: 179 --------TLFIVQLVLMGWVEGRRWADMIKPGCVDIEPTLPNKTKPKPDVGYPGGLWFD 230
Query: 195 PLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
PL PE L+ KEIKNGRLAM + GF QA+ TG+GP+ENL H+ADP + N
Sbjct: 231 PLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAVYTGEGPIENLMAHIADPGHCNI 290
Query: 254 WAYATN 259
++ T+
Sbjct: 291 FSAFTS 296
>gi|303324978|pdb|3LW5|1 Chain 1, Improved Model Of Plant Photosystem I
Length = 170
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 99/181 (54%), Gaps = 20/181 (11%)
Query: 73 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 132
PGD+G+D GL P + +E E+IHCRWAML G + PE L G W KA
Sbjct: 3 PGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEAL-------GYGNWVKA 55
Query: 133 GAQIFSEGGL-DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP---LY 188
GG YLGNP + ++ I A + + + VE R DP Y
Sbjct: 56 QEWAALPGGQATYLGNP--VPWGTLPTILAIEFLAIAFVEHQR------SMEKDPEKKKY 107
Query: 189 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLAD 247
PGG+FDPLG + DP+ ELKVKEIKNGRLA+ + GF V Q+ G GPLENLA HLAD
Sbjct: 108 PGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLAD 167
Query: 248 P 248
P
Sbjct: 168 P 168
>gi|168041643|ref|XP_001773300.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675342|gb|EDQ61838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 198
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 105/193 (54%), Gaps = 21/193 (10%)
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
PSYL G PGD+G+D GL PE + +E E+IH RWAML G + PE L
Sbjct: 11 PSYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHARWAMLAIPGVLIPEAL------- 63
Query: 125 GEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 183
G W A + GG YLGNP + ++ I A + + + VE R GE
Sbjct: 64 GYGNWVSAQKWAATPGGQATYLGNP--VPWGNLPIILAVEFIAIAFVESQRN-----GE- 115
Query: 184 TDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLE 239
+DP YPGG FDPLG + ELK+KEIKNGRLA+ + GF VQA+ G GPLE
Sbjct: 116 SDPEKRKYPGGPFDPLGFSKGAN-LEELKLKEIKNGRLALVAFLGFVVQAVAYPGTGPLE 174
Query: 240 NLADHLADPVNNN 252
NL HLADP +N
Sbjct: 175 NLKTHLADPWHNT 187
>gi|145078891|tpg|DAA05888.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca1 [Euglena gracilis]
Length = 1081
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 105/192 (54%), Gaps = 35/192 (18%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL
Sbjct: 727 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL------ 780
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL--- 180
G WF QI+ + +D+ + A+ A QVV +E +R GG L
Sbjct: 781 -GNGAWF----QIWDK--VDF----------NRFAVVALQVV--APLEYWRGNGGFLWND 821
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
E D YPG FDPL L + K EIKNGRLAM MFG VQ+ VTGK P+ N
Sbjct: 822 EETIDQSYPG--FDPLNLTTE-----YTKEAEIKNGRLAMIGMFGLEVQSHVTGKSPITN 874
Query: 241 LADHLADPVNNN 252
L DHL+ P+ N
Sbjct: 875 LIDHLSHPLTAN 886
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 121/248 (48%), Gaps = 40/248 (16%)
Query: 9 SSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYL 68
S + A S +S G + T + + GS P+ + + + PP +L
Sbjct: 114 SIALAATASTRGQSTRGVSTRGSTRGQSTRGQRSTRGS---APEEERLVWFPNATPPDHL 170
Query: 69 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 128
TGEFPGD G+D GLS DP F + R EV H R AMLG +GC+ PEL F +
Sbjct: 171 TGEFPGDRGFDPLGLSKDPVVFERMRISEVFHGRLAMLGIVGCIVPELF------FSQGP 224
Query: 129 WFKAGAQIFSEGGLDYLGNPSLIHAQSI--LAIWACQVVLMGAVEGYRIAG--GPLGEVT 184
WF S L LG L+ Q I L W G+ G GP
Sbjct: 225 WFD-----LSSFNLTRLG---LVALQVIAPLEYWRGN-------RGFSWNGDDGP----- 264
Query: 185 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 244
D YPG FDPL L D+ E K+KEIKNGRLAM +M G VQ+ +TGK PL NL++H
Sbjct: 265 DQSYPG--FDPLRLTDE-----ETKLKEIKNGRLAMTAMLGLEVQSHITGKSPLVNLSEH 317
Query: 245 LADPVNNN 252
L++P + N
Sbjct: 318 LSNPASVN 325
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 129/260 (49%), Gaps = 58/260 (22%)
Query: 6 MALSSSFVGKA--VNLAP------SGNELSNGGRISMRK-TGSKSVSSGS-PWYGPDRVK 55
+ + S GK+ VNL+ S N L+ GG ++M +G KS S P + P+ +
Sbjct: 299 LEVQSHITGKSPLVNLSEHLSNPASVNILTGGGSVAMFAGSGRKSQKSDERPLWFPNTLA 358
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
PS+LTGE+ GD G+D AGL+ADP+TF + R EV H R AML +G + P+
Sbjct: 359 ---------PSWLTGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAIVGALVPD 409
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG-YR 174
L G+ +W++A I +V + A G +
Sbjct: 410 YL-------GKGIWYEAAQNA---------------------GIGLKEVAIFTAAYGVFE 441
Query: 175 IAGGPLGEVTDP--LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 232
+A G + E +DP +YPG FDPL L D K EIKNGRLA+ ++ GF VQ V
Sbjct: 442 VARG-VKENSDPTTIYPG--FDPLNLTTD-----YTKEAEIKNGRLALTALLGFEVQRHV 493
Query: 233 TGKGPLENLADHLADPVNNN 252
G PL NLADHL P+ +N
Sbjct: 494 VGGSPLANLADHLQQPLQHN 513
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 106/203 (52%), Gaps = 39/203 (19%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
+ EPP++LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL
Sbjct: 540 NAEPPAHLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCMVGCIVPELL--- 596
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG-- 178
G+ WF+AG + +G L + + + E +R GG
Sbjct: 597 ----GKGAWFEAGDSV--DG----------------LKLGFITMAIAAPTEYWRGQGGFN 634
Query: 179 -PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
G++ D YPG FDPL L D + E+KNGRLA+ ++ G Q + TG+ P
Sbjct: 635 WQKGDL-DRSYPG--FDPLNLTTD-----YTRAAEVKNGRLALTAVAGLTAQYLATGESP 686
Query: 238 LENLADHLADPVNNNAWAYATNF 260
L NL+ HLA+P+ N ATN
Sbjct: 687 LANLSAHLANPIGAN---IATNL 706
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 102/195 (52%), Gaps = 36/195 (18%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
+ EPP++LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL
Sbjct: 914 NAEPPAHLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCMVGCIVPELL--- 970
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG-- 178
G+ WF+AG + +G L + + + E +R GG
Sbjct: 971 ----GKGAWFEAGDSV--DG----------------LKLGFITMAIAAPTEYWRGQGGFN 1008
Query: 179 -PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
G++ D YPG FDPL L D + E+KNGRLA+ ++ G Q + TG+ P
Sbjct: 1009 WQKGDL-DRSYPG--FDPLNLTTD-----YTRAAEVKNGRLALTAVAGLTAQYLATGESP 1060
Query: 238 LENLADHLADPVNNN 252
L NL HLA+P+ N
Sbjct: 1061 LANLTAHLANPLGAN 1075
>gi|449500520|ref|XP_004161120.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus]
Length = 267
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 116/234 (49%), Gaps = 39/234 (16%)
Query: 36 KTGSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
K+G SV P PDR + F G PP +L G PGD+G+D GL +DPET
Sbjct: 46 KSGVSSVCEPLP---PDRPLW---FPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFA 99
Query: 95 ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
+ E++H RWAML G + PE G+ W+ AG++ +Y +P+
Sbjct: 100 QAELMHARWAMLAVAGILLPEWFESLGL-IQNFSWYDAGSR-------EYFADPT----- 146
Query: 155 SILAIWACQVVLMGAVEGYRIAG--------------GPLGEVTDPLYPGGS-FDPLGLA 199
+ Q+ LMG VEG R A + D YPGG FDP+
Sbjct: 147 ---TLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAMADVGYPGGFWFDPMMWG 203
Query: 200 D-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
PE L+ KEIKNGRLAM + G + QAI TG+GPLENLA H+ADP + N
Sbjct: 204 RGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN 257
>gi|145078859|tpg|DAA05887.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca2 [Euglena gracilis]
Length = 1036
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 105/192 (54%), Gaps = 35/192 (18%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL
Sbjct: 727 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL------ 780
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL--- 180
G WF QI+ + +D+ + A+ A QVV +E +R GG L
Sbjct: 781 -GNGAWF----QIWDK--VDF----------NRFAVVALQVV--APLEYWRGNGGFLWND 821
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
E D YPG FDPL L + K EIKNGRLAM MFG VQ+ VTGK P+ N
Sbjct: 822 EETVDQSYPG--FDPLNLTTE-----YTKEAEIKNGRLAMIGMFGLEVQSHVTGKSPITN 874
Query: 241 LADHLADPVNNN 252
L DHL+ P+ N
Sbjct: 875 LIDHLSHPLTAN 886
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 103/193 (53%), Gaps = 37/193 (19%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP +LTGEFPGD G+D GLS DP F + R EV H R AMLG +GC+ PEL
Sbjct: 166 PPDHLTGEFPGDRGFDPLGLSTDPVVFERMRISEVFHGRLAMLGIVGCIVPELF------ 219
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI--LAIWACQVVLMGAVEGYRIAG--GP 179
F + WF S L LG L+ Q I L W G+ G GP
Sbjct: 220 FSQGPWFD-----LSGFNLTRLG---LVALQVIAPLEYWRGN-------RGFSWNGDDGP 264
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
D YPG FDPL L DD E K+KEIKNGRLAM +M G VQ+ +TGK PL
Sbjct: 265 -----DQSYPG--FDPLRLTDD-----ETKLKEIKNGRLAMTAMLGLEVQSHITGKSPLV 312
Query: 240 NLADHLADPVNNN 252
NL++HL++P + N
Sbjct: 313 NLSEHLSNPASVN 325
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 103/195 (52%), Gaps = 36/195 (18%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
+ EPP++LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL
Sbjct: 540 NAEPPAHLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCMVGCIVPELL--- 596
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG-- 178
G+ WF+AG + +G L + + + E +R GG
Sbjct: 597 ----GKGAWFEAGDSV--DG----------------LKLGFITMAIAAPTEYWRGQGGFN 634
Query: 179 -PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
GE+ D YPG FDPL L D + E+KNGRLA+ ++ G Q + TG+ P
Sbjct: 635 WQKGEL-DRSYPG--FDPLNLTTD-----YTRAAEVKNGRLALTAVAGLTAQYLATGESP 686
Query: 238 LENLADHLADPVNNN 252
L NL+ HLA+P+ N
Sbjct: 687 LANLSAHLANPIGAN 701
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 127/260 (48%), Gaps = 58/260 (22%)
Query: 6 MALSSSFVGKA--VNLAP------SGNELSNGGRISM-RKTGSKSVSSGS-PWYGPDRVK 55
+ + S GK+ VNL+ S N L+ GG ++M +G KS S P + P+ +
Sbjct: 299 LEVQSHITGKSPLVNLSEHLSNPASVNILTGGGSVAMFAASGRKSQKSDERPLWFPNTLA 358
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
PS+L GE+ GD G+D AGL+ADP+TF + R EV H R AML +G + P+
Sbjct: 359 ---------PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPD 409
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG-YR 174
L G+ +W++A I +V + A G +
Sbjct: 410 YL-------GKGIWYEAAQNA---------------------GIGLKEVAIFTAAYGVFE 441
Query: 175 IAGGPLGEVTDP--LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 232
+A G + E +DP +YPG FDPL L D K EIKNGRLA+ ++ GF VQ V
Sbjct: 442 VARG-VKENSDPTTIYPG--FDPLNLTTD-----YTKEAEIKNGRLALTALLGFEVQRHV 493
Query: 233 TGKGPLENLADHLADPVNNN 252
G PL NLA+HL P+ N
Sbjct: 494 VGGSPLANLAEHLQQPLQRN 513
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 76/151 (50%), Gaps = 31/151 (20%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
+ EPP++LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL
Sbjct: 914 NAEPPAHLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCMVGCIVPELL--- 970
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG-- 178
G+ WF+AG + +G L + + + E +R GG
Sbjct: 971 ----GKGAWFEAGDSV--DG----------------LKLGFITMAIAAPTEYWRGQGGFN 1008
Query: 179 -PLGEVTDPLYPGGSFDPLGLADDPEAFAEL 208
GE+ D YPG FDPL L D AE+
Sbjct: 1009 WQKGEL-DRSYPG--FDPLNLTTDYTRAAEV 1036
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 188 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
YP FDPL LA DP+ +A ++V E+ +GRLAM M G V ++ GKG
Sbjct: 925 YPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCMVGCIVPELL-GKG 973
>gi|169195|gb|AAA33701.1| Major Cab protein [Petunia x hybrida]
Length = 62
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/62 (96%), Positives = 61/62 (98%)
Query: 203 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262
EAFAELKVKEIKNGRLA FSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVP
Sbjct: 1 EAFAELKVKEIKNGRLAAFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVP 60
Query: 263 GK 264
GK
Sbjct: 61 GK 62
>gi|87313215|gb|ABD37904.1| light-harvesting chlorophyll-a/b binding protein Lhca2
[Chlamydomonas incerta]
Length = 254
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 117/217 (53%), Gaps = 31/217 (14%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
+YL G PGD+G+D GL DP F + + L EVIH RWAMLGA GC+ PE+L
Sbjct: 42 AYLDGTLPGDFGFDPLGL-LDPVNSGGFIEPKWLQYSEVIHARWAMLGAAGCIAPEVLGA 100
Query: 120 NGV--KFGEAVWFKAGAQIFSEGGLD-YLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176
G+ WF++G I G D Y +P I I+A+ Q + ++ +R
Sbjct: 101 AGLIPDATNIKWFESGV-IPPAGSYDGYWADPYTIFFVEIVAM---QFAELRRLQDFRYP 156
Query: 177 GGPLGEVT------------DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
G +G+ D YPGG F + L A ELK+KEIKNGRLAM +M
Sbjct: 157 GS-MGQQYFLGLEAIFKGSGDAAYPGGPFFNLFNLGKTEAAMKELKLKEIKNGRLAMLAM 215
Query: 224 FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
G+ QA++TGKGP +NL +HLADPVNNN TNF
Sbjct: 216 LGYGAQAVLTGKGPFQNLVEHLADPVNNNIL---TNF 249
>gi|255646839|gb|ACU23891.1| unknown [Glycine max]
Length = 260
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 121/238 (50%), Gaps = 36/238 (15%)
Query: 39 SKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 97
+K VS+ PDR + F G PP +L G PGD+G+D GL +DPE + E
Sbjct: 42 TKGVSAVCEPLPPDRPLW---FPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAE 98
Query: 98 VIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSIL 157
++H RWAML G + PELL R G W+ AG + +Y +P+
Sbjct: 99 LMHSRWAMLAVFGILVPELLERIGY-IENFSWYDAGTR-------EYFVDPT-------- 142
Query: 158 AIWACQVVLMGAVEGYRIAG----------GPLGEVTDPL----YPGGS-FDPLGLAD-D 201
++ Q+ LMG VEG R A + VT+P YPGG FDP+
Sbjct: 143 TLFVVQMGLMGWVEGRRWADIVNPGSVDIEPKVPHVTNPKPDVGYPGGLWFDPMMWGRGS 202
Query: 202 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 259
PE L+ KEIKNG LAM + GF+ QAI TG+GP+ENL HLADP + N ++ T
Sbjct: 203 PEPVMVLRTKEIKNGGLAMLAFVGFWFQAIYTGEGPIENLMAHLADPGHCNIFSAFTR 260
>gi|168052965|ref|XP_001778909.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669663|gb|EDQ56245.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 198
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 105/193 (54%), Gaps = 21/193 (10%)
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
PSYL G PGD+G+D GL PE + +E E+IH RWAML G + PE L
Sbjct: 11 PSYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHARWAMLAVPGVLIPEAL------- 63
Query: 125 GEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 183
G W A + GG YLGNP + ++ I A + + + E R GE
Sbjct: 64 GYGNWVSAQKWAATPGGQATYLGNP--VPWGTLPVILAVEFIAIAFAESQRN-----GE- 115
Query: 184 TDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLE 239
+DP YPGG+FDP+G + ELK+KEIKNGRLA+ + GF +QAI G GPLE
Sbjct: 116 SDPEKRKYPGGAFDPMGFSKGAN-LEELKLKEIKNGRLALVAFLGFAIQAIAYPGTGPLE 174
Query: 240 NLADHLADPVNNN 252
NL HLADP +N
Sbjct: 175 NLKTHLADPWHNT 187
>gi|226495517|ref|NP_001141336.1| uncharacterized protein LOC100273427 [Zea mays]
gi|194704056|gb|ACF86112.1| unknown [Zea mays]
Length = 271
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 133/281 (47%), Gaps = 52/281 (18%)
Query: 6 MALSSSFVGKAVNLAPSGNEL---------------SNGGRISMRKTGSKS--VSSGSPW 48
MALSS+ A +L PSG + ++ R R+ + VS+
Sbjct: 1 MALSSAGSFVACSLRPSGASIHAPRSPPHLKPGAAAASFTRTPQRRANATKGGVSTVCEP 60
Query: 49 YGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
GPDR + F G PP +L G PGD+G+D GL ++PE + E++H RWAML
Sbjct: 61 LGPDRPIW---FPGSSPPPWLDGSLPGDFGFDPLGLGSEPELLRWFAQAELMHGRWAMLA 117
Query: 108 ALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLM 167
A G + P+LLAR G WF AG++ +Y +P ++ Q+ LM
Sbjct: 118 AAGILVPDLLARWGFIDAGFSWFDAGSR-------EYFADP--------WTLFVSQMALM 162
Query: 168 GAVEGYRIAG--------------GPLGEVTDPLYPGG-SFDPLGLAD-DPEAFAELKVK 211
G EG R A V D YPGG FD PE L+ K
Sbjct: 163 GWAEGRRWADYLRPGCVDIEPRFPNRRNPVPDVGYPGGLWFDWANWGRGSPEPVMVLRTK 222
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
EIKNGRLAM + GF+ QA+ TG+GP++NL HLADP + N
Sbjct: 223 EIKNGRLAMLAFVGFWFQAVYTGQGPIDNLLAHLADPGHCN 263
>gi|449452592|ref|XP_004144043.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus]
Length = 267
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 118/235 (50%), Gaps = 41/235 (17%)
Query: 36 KTGSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
K+G SV P PDR + F G PP +L G PGD+G+D GL +DPET
Sbjct: 46 KSGVSSVCEPLP---PDRPLW---FPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFA 99
Query: 95 ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
+ E++H RWAML G + PE G+ W+ AG++ +Y +P+
Sbjct: 100 QAELMHARWAMLAVAGILLPEWFESLGL-IQNFSWYDAGSR-------EYFADPT----- 146
Query: 155 SILAIWACQVVLMGAVEGYRIAG--GPLGEV-------------TDPLYPGGS-FDPLGL 198
+ Q+ LMG VEG R A P G V D YPGG FDP+
Sbjct: 147 ---TLLVAQLALMGWVEGRRWADLVNP-GSVDVDLKLPHKKKAKADVGYPGGFWFDPMMW 202
Query: 199 AD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
PE L+ KEIKNGRLAM + G + QAI TG+GPLENLA H+ADP + N
Sbjct: 203 GRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN 257
>gi|40714521|dbj|BAD06924.1| light-harvesting chlorophyll-a/b protein of photosystem I
[Chlamydomonas reinhardtii]
Length = 241
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP++L G GDYG+D L +P+T + E++H R+AMLGA G + + A+ G+
Sbjct: 39 PPAHLDGSLAGDYGFDPLFLGQEPQTLKWYVQAELVHGRFAMLGAAGIILTSIGAKVGLG 98
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 183
F E W+ AG + + +D+ P+L+ Q L WA A G
Sbjct: 99 FPE--WYDAGKVVVEKNNIDF---PTLMVIQFYLMGWAETKRWYDFKNPGSQADGSFLGF 153
Query: 184 TDPL------YPGGSF-DPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
T+ YPGG F DP+GL+ D + E K KE+KNGRLAM + GF Q TGK
Sbjct: 154 TEEFKGLENGYPGGRFFDPMGLSRGDAAKYQEYKQKEVKNGRLAMIACLGFAAQYAATGK 213
Query: 236 GPLENLADHLADPVNNNAWAYATNFV 261
GPL+NLADHLADP + N +ATN V
Sbjct: 214 GPLDNLADHLADPNHVN---FATNGV 236
>gi|159486759|ref|XP_001701405.1| light-harvesting chlorophyll-a/b protein of photosystem I, type III
[Chlamydomonas reinhardtii]
gi|158271707|gb|EDO97521.1| light-harvesting chlorophyll-a/b protein of photosystem I, type III
[Chlamydomonas reinhardtii]
Length = 298
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 115/216 (53%), Gaps = 29/216 (13%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
+YL G PGD+G+D GL DP F + + L EVIH RWAMLGA GC+ PE+L
Sbjct: 55 AYLDGSLPGDFGFDPLGL-LDPVNSGGFIEPKWLQYSEVIHARWAMLGAAGCIAPEVLGA 113
Query: 120 NGV--KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
G+ WF++G + Y +P I I+A+ Q + ++ +R G
Sbjct: 114 AGLIPDATNIKWFESGVIPPAGSYNGYWADPYTIFFVEIVAM---QFAELRRLQDFRYPG 170
Query: 178 GPLGEVT------------DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
+G+ D YPGG F + L A ELK+KEIKNGRLAM +M
Sbjct: 171 S-MGQQYFLGLEAIFKGSGDAAYPGGPFFNLFNLGKTEAAMKELKLKEIKNGRLAMLAML 229
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
G+ QA++TGKGP +NL +HLADPVNNN TNF
Sbjct: 230 GYGAQAVMTGKGPFQNLVEHLADPVNNN---ILTNF 262
>gi|302806497|ref|XP_002984998.1| light-harvesting complex [Selaginella moellendorffii]
gi|300147208|gb|EFJ13873.1| light-harvesting complex [Selaginella moellendorffii]
Length = 268
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 106/201 (52%), Gaps = 32/201 (15%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP++L G P D+G+D GL ++PE + E++H RWAMLGA G PE L + G+
Sbjct: 72 PPAWLDGSLPADFGFDPLGLGSEPELLKWFVQSEIVHSRWAMLGAAGIFIPEALTKLGI- 130
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLG 181
W+ AG Q +Y + Q+ L I +++L+G EG R A P
Sbjct: 131 LNTPFWYTAGEQ-------EYFTD------QTTLFI--VEMILLGWAEGRRWADILKPGS 175
Query: 182 EVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFF 227
TDP+ YPGG FDP G PE EL+ KEIKNGRLAM ++ G +
Sbjct: 176 VNTDPVFPNNKLTGTDVGYPGGFWFDPFGWGTASPEKLKELRTKEIKNGRLAMLAVMGAW 235
Query: 228 VQAIVTGKGPLENLADHLADP 248
QA+ TG P++NL HLADP
Sbjct: 236 FQAVYTGARPIDNLLAHLADP 256
>gi|302808989|ref|XP_002986188.1| light-harvesting complex [Selaginella moellendorffii]
gi|300146047|gb|EFJ12719.1| light-harvesting complex [Selaginella moellendorffii]
Length = 268
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 106/201 (52%), Gaps = 32/201 (15%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP++L G P D+G+D GL ++PE + E++H RWAMLGA G PE L + G+
Sbjct: 72 PPAWLDGSLPADFGFDPLGLGSEPELLKWFVQSEIVHSRWAMLGAAGIFIPEALTKLGI- 130
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLG 181
W+ AG Q +Y + Q+ L I +++L+G EG R A P
Sbjct: 131 LNTPFWYTAGEQ-------EYFTD------QTTLFI--VEMILLGWAEGRRWADILKPGS 175
Query: 182 EVTDPL------------YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFF 227
TDP+ YPGG FDP G PE EL+ KEIKNGRLAM ++ G +
Sbjct: 176 VNTDPVFPNNKLTGTDVGYPGGFWFDPFGWGTASPEKLKELRTKEIKNGRLAMLAVMGAW 235
Query: 228 VQAIVTGKGPLENLADHLADP 248
QA+ TG P++NL HLADP
Sbjct: 236 FQAVYTGARPIDNLLAHLADP 256
>gi|414589583|tpg|DAA40154.1| TPA: hypothetical protein ZEAMMB73_160322 [Zea mays]
gi|414589584|tpg|DAA40155.1| TPA: hypothetical protein ZEAMMB73_160322 [Zea mays]
Length = 271
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 133/281 (47%), Gaps = 52/281 (18%)
Query: 6 MALSSSFVGKAVNLAPSGNEL---------------SNGGRISMRKTGSKS--VSSGSPW 48
MALSS+ A +L PSG + ++ R R+ + VS+
Sbjct: 1 MALSSAGSFVACSLRPSGASIHAPRSPPHLKPGAAAASFTRTPQRRANATKGGVSTVCEP 60
Query: 49 YGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107
GPDR + F G PP +L G PGD+G+D GL ++PE + E++H RWAML
Sbjct: 61 LGPDRPIW---FPGSSPPPWLDGSLPGDFGFDPLGLGSEPELLRWFAQAELMHGRWAMLA 117
Query: 108 ALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLM 167
A G + P+LLAR G WF AG++ +Y +P ++ Q+ LM
Sbjct: 118 AAGILVPDLLARWGFIDAGFSWFDAGSR-------EYFADP--------WTLFVSQMALM 162
Query: 168 GAVEGYRIAG--------------GPLGEVTDPLYPGG-SFDPLGLAD-DPEAFAELKVK 211
G EG R A V D YPGG FD PE L+ K
Sbjct: 163 GWAEGRRWADYLRPGCVDIEPRFPNRKNPVPDVGYPGGLWFDWANWGRGSPEPVMVLRTK 222
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
EIKNGRLAM + GF+ QA+ TG+GP++NL HLADP + N
Sbjct: 223 EIKNGRLAMLAFVGFWFQAVYTGQGPIDNLLAHLADPGHCN 263
>gi|27542569|gb|AAO16495.1| light-harvesting complex I protein [Chlamydomonas reinhardtii]
Length = 241
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP++L G GDYG+D L +P+T + E++H R+AMLGA G + + A+ G+
Sbjct: 39 PPAHLDGSLAGDYGFDPLFLGQEPQTLKWYVQAELVHGRFAMLGAAGIILTSIGAKVGLG 98
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 183
F E W+ AG + + +D+ P+L+ Q L WA A G
Sbjct: 99 FPE--WYDAGKVVVEKNNIDF---PTLMVIQFYLMGWAETKRWYDFKNPGSQADGSFLGF 153
Query: 184 TDPL------YPGGSF-DPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
T+ YPGG F DP+GL+ D + E K KE+KNGRLAM + GF Q TGK
Sbjct: 154 TEEFKGLENGYPGGRFFDPMGLSRGDAAKYQEYKQKEVKNGRLAMIACLGFAAQYAATGK 213
Query: 236 GPLENLADHLADPVNNNAWAYATNFV 261
GPL+NLADHLADP + N +ATN V
Sbjct: 214 GPLDNLADHLADPNHVN---FATNGV 236
>gi|40714511|dbj|BAD06919.1| light-harvesting chlorophyll-a/b protein of photosystem I (Type
III) [Chlamydomonas reinhardtii]
Length = 267
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 115/216 (53%), Gaps = 29/216 (13%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
+YL G PGD+G+D GL DP F + + L EVIH RWAMLGA GC+ PE+L
Sbjct: 55 AYLDGSLPGDFGFDPLGL-LDPVNSGGFIEPKWLQYSEVIHARWAMLGAAGCIAPEVLGA 113
Query: 120 NGV--KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
G+ WF++G + Y +P I I+A+ Q + ++ +R G
Sbjct: 114 AGLIPDATNIKWFESGVIPPAGSYNGYWADPYTIFFVEIVAM---QFAELRRLQDFRYPG 170
Query: 178 GPLGEVT------------DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
+G+ D YPGG F + L A ELK+KEIKNGRLAM +M
Sbjct: 171 S-MGQQYFLGLEAIFKGSGDAAYPGGPFFNLFNLGKTEAAMKELKLKEIKNGRLAMLAML 229
Query: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
G+ QA++TGKGP +NL +HLADPVNNN TNF
Sbjct: 230 GYGAQAVMTGKGPFQNLVEHLADPVNNNIL---TNF 262
>gi|157965819|gb|ABW06946.1| chloroplast light-harvesting complex I protein precursor [Euglena
gracilis]
Length = 823
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 105/192 (54%), Gaps = 35/192 (18%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL
Sbjct: 469 PPRYLTGEAFGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL------ 522
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL--- 180
G WF QI+ + +D+ + A+ A QVV +E +R GG L
Sbjct: 523 -GNGAWF----QIWDK--VDF----------NRFAVVALQVV--APLEYWRGNGGFLWND 563
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
E D YPG FDPL L + K EIKNGRLAM MFG VQ+ VTGK P+ N
Sbjct: 564 EETVDQSYPG--FDPLNLTTE-----YTKEAEIKNGRLAMIGMFGLEVQSHVTGKSPITN 616
Query: 241 LADHLADPVNNN 252
L DHL+ P+ N
Sbjct: 617 LIDHLSSPLTAN 628
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 128/259 (49%), Gaps = 57/259 (22%)
Query: 6 MALSSSFVGKA--VNLAP------SGNELSNGGRISM-RKTGSKSVSSGSPWYGPDRVKY 56
+ + S GK+ VNL+ S N L+ GG ++M +G K+ S P + P+ +
Sbjct: 42 LEVQSHLTGKSPLVNLSEHLSNPASVNILTGGGSVAMFYASGRKTQSEDRPLWFPNTLA- 100
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
PS+LTGE+ GD G+D AGL+ADPETF + R EV H R AML +G + P+
Sbjct: 101 --------PSWLTGEYFGDRGFDPAGLAADPETFERMRIAEVYHGRLAMLAVVGALVPDY 152
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG-YRI 175
L G+ +W++A I +V + A G + +
Sbjct: 153 L-------GKGIWYEAAQNA---------------------GIGVKEVAIFTAAYGVFEV 184
Query: 176 AGGPLGEVTDP--LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 233
A G + E +DP +YPG FDPL L D K EIKNGRLA+ ++ GF VQ V
Sbjct: 185 ARG-VKENSDPTTVYPG--FDPLNLTTD-----YTKEAEIKNGRLALTALLGFEVQRHVV 236
Query: 234 GKGPLENLADHLADPVNNN 252
G PL NLADHL P+ N
Sbjct: 237 GGSPLANLADHLQQPLQRN 255
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 104/204 (50%), Gaps = 39/204 (19%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
EPP++LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL
Sbjct: 656 DAEPPAHLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCMVGCIVPELL--- 712
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG-- 178
G+ WF+AG + L + + + E +R GG
Sbjct: 713 ----GKGAWFEAGDSV------------------DGLKLGFIAMAIAAPTEYWRGHGGFN 750
Query: 179 -PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
G++ D YPG FDPL L D K E+KNGRLA+ ++ G Q + TG+ P
Sbjct: 751 WQKGDL-DRSYPG--FDPLNLTTD-----YTKAAEVKNGRLALTAVAGLTAQYLATGESP 802
Query: 238 LENLADHLADPVNNNAWAYATNFV 261
L NLA HLA+PV N ATN V
Sbjct: 803 LANLAAHLANPVGAN---IATNLV 823
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 100/195 (51%), Gaps = 36/195 (18%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 120
EPP++LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL
Sbjct: 282 DAEPPAHLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCMVGCIVPELL--- 338
Query: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG-- 178
G+ WF+AG + L + + + E +R GG
Sbjct: 339 ----GKGAWFEAGDSV------------------DGLKLGFIAMAIAAPTEYWRGHGGFN 376
Query: 179 -PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
G++ D YPG FDPL L D K E+KNGRLA+ ++ G Q + TG+ P
Sbjct: 377 WQKGDL-DRSYPG--FDPLNLTTD-----YTKAAEVKNGRLALTAVAGLTAQYLATGESP 428
Query: 238 LENLADHLADPVNNN 252
L NL+ HLA+P+ N
Sbjct: 429 LANLSAHLANPIGAN 443
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 7/68 (10%)
Query: 185 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 244
D YPG FDPL L D+ E K+KEIKNGRLAM +M G VQ+ +TGK PL NL++H
Sbjct: 8 DQSYPG--FDPLRLTDE-----ETKLKEIKNGRLAMTAMLGLEVQSHLTGKSPLVNLSEH 60
Query: 245 LADPVNNN 252
L++P + N
Sbjct: 61 LSNPASVN 68
>gi|388518909|gb|AFK47516.1| unknown [Lotus japonicus]
Length = 266
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 108/194 (55%), Gaps = 14/194 (7%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP+YL G GDYG+D GL DPE+ + E++H R+AMLG G + +LL G+
Sbjct: 65 DPPAYLDGTLAGDYGFDPLGLGEDPESLRWYVQAELVHARFAMLGVFGILVTDLLRVTGL 124
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG-------AVEGYRI 175
VWF+AGA + ++ +LI Q +L +A M A EG
Sbjct: 125 S-KIPVWFEAGAVKY-----EFTNTQTLIIVQLLLMGFAETKRYMDFIGPGSQAKEGSFF 178
Query: 176 AGGPLGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
E +P YPGG +PLGLA D + E K+KEIKNGRLAM ++ G FVQA VT
Sbjct: 179 GLEASFEGLEPGYPGGPLLNPLGLAKDIKNARESKLKEIKNGRLAMVAILGIFVQASVTH 238
Query: 235 KGPLENLADHLADP 248
GP++NL +HL++P
Sbjct: 239 VGPIDNLVEHLSNP 252
>gi|388510254|gb|AFK43193.1| unknown [Lotus japonicus]
Length = 213
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 108/194 (55%), Gaps = 14/194 (7%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP+YL G GDYG+D GL DPE+ + E++H R+AMLG G + +LL G+
Sbjct: 12 DPPAYLDGTLAGDYGFDPLGLGEDPESLRWYVQAELVHARFAMLGVFGILVTDLLRVTGL 71
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG-------AVEGYRI 175
VWF+AGA + ++ +LI Q +L +A M A EG
Sbjct: 72 S-KIPVWFEAGAVKY-----EFTNTQTLIIVQLLLMGFAETKRYMDFISPGSQAKEGSFF 125
Query: 176 AGGPLGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
E +P YPGG +PLGLA D + E K+KEIKNGRLAM ++ G FVQA VT
Sbjct: 126 GLEASFEGLEPGYPGGPLLNPLGLAKDIKNARESKLKEIKNGRLAMVAILGIFVQASVTH 185
Query: 235 KGPLENLADHLADP 248
GP++NL +HL++P
Sbjct: 186 VGPIDNLVEHLSNP 199
>gi|79320443|ref|NP_001031217.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
gi|332195726|gb|AEE33847.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
Length = 218
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 114/207 (55%), Gaps = 35/207 (16%)
Query: 72 FPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFG 125
PGDYG+D GLS DPE F + R L E+I+ R+AMLGA G + PE+L + G+
Sbjct: 15 LPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPA 73
Query: 126 EAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG----GP 179
E WF+ G I G Y + ++ ++ LMG E R+ G
Sbjct: 74 ETALPWFQTGV-IPPAGTYTYWADN--------YTLFVLEMALMGFAEHRRLQDWYNPGS 124
Query: 180 LGEVT------------DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
+G+ +P YPGG F +PLG D ++ ELK+KE+KNGRLAM ++ G+
Sbjct: 125 MGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 184
Query: 227 FVQAIVTGKGPLENLADHLADPVNNNA 253
F+Q +VTG GP +NL DHLADPVNNN
Sbjct: 185 FIQGLVTGVGPYQNLLDHLADPVNNNV 211
>gi|168049224|ref|XP_001777064.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671629|gb|EDQ58178.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 114/213 (53%), Gaps = 35/213 (16%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
SYL G PGDYG+D GL DPE F + L E+I+ R+AMLGA G + PE+L R
Sbjct: 15 SYLDGTLPGDYGFDPLGL-MDPEGAGGFIDPQWLPYAEIINGRFAMLGAAGAIAPEVLGR 73
Query: 120 NGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
G+ E WF++G I G Y +P ++ ++ LMG E R
Sbjct: 74 IGLIPQETAIPWFQSGV-IPPVGNYSYWADP--------YTLFVLEMALMGFAEHRRAQD 124
Query: 178 ----GPLGEVT------------DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAM 220
G +G+ +P YPGG F+ LG + + ELKVKE+KNGRLAM
Sbjct: 125 YYKPGSMGKQYFLGLEKFLGGSGNPAYPGGPIFNFLGFGKNEKELQELKVKEVKNGRLAM 184
Query: 221 FSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
++ G+F QAI TG GP +NL DHLADPV+NN
Sbjct: 185 MAVLGYFTQAIFTGVGPFQNLLDHLADPVHNNV 217
>gi|168049170|ref|XP_001777037.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671602|gb|EDQ58151.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 242
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 114/213 (53%), Gaps = 35/213 (16%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
SYL G PGDYG+D GL DPE F + L E+I+ R+AMLGA G + PE+L R
Sbjct: 33 SYLDGTLPGDYGFDPLGL-MDPEGAGGFIDPQWLPYAEIINGRFAMLGAAGAIAPEVLGR 91
Query: 120 NGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
G+ E WF++G I G Y +P ++ ++ LMG E R
Sbjct: 92 IGLIPQETAIPWFQSGV-IPPVGNYSYWADP--------YTLFVLEMALMGFAEHRRAQD 142
Query: 178 ----GPLGEVT------------DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAM 220
G +G+ +P YPGG F+ LG + + ELKVKE+KNGRLAM
Sbjct: 143 YYKPGSMGKQYFLGLEKFLGGSGNPAYPGGPIFNFLGFGKNEKELQELKVKEVKNGRLAM 202
Query: 221 FSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
++ G+F QAI TG GP +NL DHLADPV+NN
Sbjct: 203 MAVLGYFTQAIFTGVGPFQNLLDHLADPVHNNV 235
>gi|168052237|ref|XP_001778557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670011|gb|EDQ56587.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 273
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 105/203 (51%), Gaps = 15/203 (7%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP +L G PGD+G+D GL +DPE + E++HCRWAMLGA G PE L + G+
Sbjct: 73 QPPEWLDGSLPGDFGFDPLGLGSDPELLKWFVQAELVHCRWAMLGAAGIFIPEALTKAGI 132
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIAG 177
W AG Q + + +L + IL WA ++ G V +
Sbjct: 133 -LNTPSWTVAGDQQY------FTDATTLFVIEIILFAWAEGRRWADIINPGCVNVDPVFP 185
Query: 178 GPLGEVTDPLYPGGS-FDPLGLAD--DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
TD YPGG FDPLG D +L+ +EIKNGRLAM ++ G VQA T
Sbjct: 186 NNKLTGTDVGYPGGLWFDPLGWGQTGDAAKLKDLRTREIKNGRLAMLAVLGAVVQANYTH 245
Query: 235 KGPLENLADHLADPVNNNAWAYA 257
GP++NL HLADP +N +A +
Sbjct: 246 TGPIDNLLAHLADPGHNTIFALS 268
>gi|384246844|gb|EIE20333.1| light-harvesting chlorophyll a/b-binding protein Lhca2 [Coccomyxa
subellipsoidea C-169]
Length = 246
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 119/226 (52%), Gaps = 39/226 (17%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPE-------TFAKNRELEVIHCRWAMLGALGCVF 113
S + SYLTG P DYG+D GL DPE + A + EVIH RWAMLGA GC+
Sbjct: 29 SDQSLSYLTGALPADYGFDPLGL-LDPEGKGAGFVSPAWLQYSEVIHARWAMLGAAGCIA 87
Query: 114 PELLARNGV---KFGEAVWFKAGAQIFSEGGLD--YLGNPSLIHAQSILAIWACQVVLMG 168
PE+LA GV E +WFK+G I G D +L SL + IL Q +
Sbjct: 88 PEILATAGVIPQTPDEVIWFKSGV-IPPAGVYDKYWLDPYSLFFIEVIL----VQFAELR 142
Query: 169 AVEGYRIAGGP-------LGEVT----DPLYPGGSFDPL---GLADDPEAFAELKVKEIK 214
+ +R G L EV DP YPGG F L G +D ELK KE+K
Sbjct: 143 RWQDFRNPGSQGKQYFLGLEEVLKGSGDPSYPGGQFFNLFNLGKSD----LKELKTKELK 198
Query: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
NGRLAM ++FG+ QA++T +GP +NL DHL+DP +N TNF
Sbjct: 199 NGRLAMLAVFGYGAQAVITAEGPFKNLTDHLSDPTGHNI---LTNF 241
>gi|413954857|gb|AFW87506.1| chlorophyll a-b binding protein 8 [Zea mays]
Length = 209
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 112/208 (53%), Gaps = 35/208 (16%)
Query: 71 EFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKF 124
PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+ + G+
Sbjct: 5 RLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEIFGKMGIIP 63
Query: 125 GEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG----G 178
E WFK G I G +Y + ++ + LMG E R+ G
Sbjct: 64 PETALPWFKTGV-IPPAGTYNYWADS--------YTLFVFNMALMGFAEHRRLQDWYNPG 114
Query: 179 PLGEVT------------DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
+G+ DP YPGG F+PLG + ELK+KEIKNGRLAM ++ G
Sbjct: 115 SMGKQYFLGLEKFLAGSGDPSYPGGPLFNPLGFGKTEKEMNELKLKEIKNGRLAMLAILG 174
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNNA 253
+F+Q +VTG GP +NL DHLADPVNNN
Sbjct: 175 YFIQGLVTGVGPFQNLLDHLADPVNNNV 202
>gi|168065932|ref|XP_001784899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663529|gb|EDQ50288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 114/213 (53%), Gaps = 35/213 (16%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
SYL G PGDYG+D GL DPE F + L E+I+ R+AMLGA G + PE+L R
Sbjct: 15 SYLDGTLPGDYGFDPLGL-MDPEGAGGFIDPQWLPYAEIINGRFAMLGAAGAIAPEVLGR 73
Query: 120 NGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
G+ E WF++G I G Y +P ++ ++ LMG E R
Sbjct: 74 IGLIPQETAIPWFQSGV-IPPVGNYSYWADP--------YTLFVLEMALMGFAEHRRAQD 124
Query: 178 ----GPLGEVT------------DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAM 220
G +G+ +P YPGG F+ LG + + ELKVKE+KNGRLAM
Sbjct: 125 YYKPGSMGKQYFLGLEKFLGGSGNPAYPGGPIFNFLGFGKNEKELQELKVKEVKNGRLAM 184
Query: 221 FSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
++ G+F QAI TG GP +NL DHLADPV+NN
Sbjct: 185 MAVLGYFTQAIFTGVGPFQNLLDHLADPVHNNV 217
>gi|116793607|gb|ABK26807.1| unknown [Picea sitchensis]
Length = 125
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/64 (89%), Positives = 60/64 (93%)
Query: 201 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 260
D + ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNF
Sbjct: 62 DRVLYLELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNF 121
Query: 261 VPGK 264
VPGK
Sbjct: 122 VPGK 125
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 10/54 (18%)
Query: 14 GKAVNLAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYL 57
G+ +L P N+L G R++MRK+ +K VS S SPWYGPDRV YL
Sbjct: 14 GQISSLKPHNNQLVGVGAGVHGEARVTMRKSSTKKVSASASTSPWYGPDRVLYL 67
>gi|74272669|gb|ABA01130.1| chloroplast light harvesting complex I protein [Chlamydomonas
incerta]
Length = 241
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 113/211 (53%), Gaps = 17/211 (8%)
Query: 60 FSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
F G P P++L G GDYG+D L + ET + E++H R+AMLGA G + + A
Sbjct: 34 FPGNPAPAHLDGTLAGDYGFDPLFLGQEKETLRWYVQAELVHGRFAMLGAAGIILTSIGA 93
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 178
+ G+ F E W+ AG + + +D+ P+LI Q L WA A G
Sbjct: 94 KVGLGFPE--WYDAGKVVVEKNNIDF---PTLIVIQFYLMGWAETKRWYDFKNPGSQADG 148
Query: 179 PLGEVTDPL------YPGGSF-DPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
T+ YPGG F DP+GL+ D +AE K KE+KNGRLAM + GF Q
Sbjct: 149 SFLGFTEEFKGLENGYPGGRFFDPMGLSRGDAAKYAEYKQKEVKNGRLAMIACLGFAAQY 208
Query: 231 IVTGKGPLENLADHLADPVNNNAWAYATNFV 261
TGKGPL+NL+DHLADP + N +ATN V
Sbjct: 209 AATGKGPLDNLSDHLADPNHIN---FATNGV 236
>gi|168060917|ref|XP_001782439.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666110|gb|EDQ52774.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 210
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 105/203 (51%), Gaps = 17/203 (8%)
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
P +L G PGD+G+D GL +DPE + E++HCRWAMLGA G PE L + G+
Sbjct: 12 PEWLDGSLPGDFGFDPLGLGSDPELLKWFVQAELVHCRWAMLGAAGIFIPEALTKAGI-L 70
Query: 125 GEAVWFKAGAQIFSEGGLDYLGNP-SLIHAQSILAIWA-----CQVVLMGAVEGYRIAGG 178
W AG Q Y +P +L + IL WA +V G V +
Sbjct: 71 NTPSWNVAGDQ-------QYFADPTTLFVIELILFAWAEGRRWADIVNPGCVNVDPVFPN 123
Query: 179 PLGEVTDPLYPGGS-FDPLGL--ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 235
TD YPGG FDPLG D + EL+ KEIKNGRLAM ++ G VQA T
Sbjct: 124 NKLTGTDVGYPGGLWFDPLGWGQTKDAKKLKELRTKEIKNGRLAMLAVLGAVVQANYTHT 183
Query: 236 GPLENLADHLADPVNNNAWAYAT 258
GP++NL HLADP +N +A +
Sbjct: 184 GPIDNLLAHLADPGHNTIFALSN 206
>gi|225458605|ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
vinifera]
gi|302142320|emb|CBI19523.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 106/203 (52%), Gaps = 32/203 (15%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP YL G GD+G+D GL DPE + E++H R+AM G G + +LL G+
Sbjct: 64 DPPPYLNGTLAGDFGFDPLGLGEDPENLRWYVQAELVHARFAMAGVAGILVTDLLRVTGI 123
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA------ 176
VW++AGA F + A++ Q++LMG VE R
Sbjct: 124 S-NLPVWYEAGAVKFEFASTE--------------ALFIVQLILMGFVETKRYMDFTNPG 168
Query: 177 -----GGPLG-----EVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
G G E +P YPGG +PLGLA D + + K+KEIKNGRLAM +M G
Sbjct: 169 SQAKEGSFFGLEAALEGLEPGYPGGPLLNPLGLARDIKNAHDWKLKEIKNGRLAMVAMLG 228
Query: 226 FFVQAIVTGKGPLENLADHLADP 248
FVQA VT GP+ENL +HL++P
Sbjct: 229 VFVQASVTHAGPIENLVEHLSNP 251
>gi|169261094|gb|ACA52195.1| chloroplast chlorophyll A/B-binding protein [Oenothera elata
subsp. hookeri]
Length = 94
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 74/90 (82%), Gaps = 9/90 (10%)
Query: 3 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTG-----SKSVSSGSPWYGPDRVKYL 57
+STM++SS F+GKAV L+P E+ G+++MRKT +KS SSGSPWYGPDRVKYL
Sbjct: 9 SSTMSVSS-FMGKAVKLSP---EVLGTGKVTMRKTAGKTKQTKSASSGSPWYGPDRVKYL 64
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADP 87
GPFSGE PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 65 GPFSGESPSYLTGEFPGDYGWDTAGLSADP 94
>gi|117663141|gb|ABK55743.1| chloroplast type III LHCII CAB precursor protein [Cucumis sativus]
Length = 84
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 70/85 (82%), Gaps = 3/85 (3%)
Query: 166 LMGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
LM VEG+RI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSM
Sbjct: 1 LMVLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSM 59
Query: 224 FGFFVQAIVTGKGPLENLADHLADP 248
FGFFVQAIVTGKGPLENL DHL DP
Sbjct: 60 FGFFVQAIVTGKGPLENLLDHLDDP 84
>gi|356519222|ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Glycine max]
Length = 263
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 110/203 (54%), Gaps = 32/203 (15%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP +L G GD+G+D GL+ DP + + E++HCR+AMLG G + +LL G+
Sbjct: 62 DPPPHLDGTLAGDFGFDPLGLAEDPASLRWYVQAELVHCRFAMLGVFGILVTDLLRVTGI 121
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR----IAGG 178
VWF+AGA + D+ +L + Q+VLMG VE R ++ G
Sbjct: 122 S-KIPVWFEAGAVKY-----DFANTKTL---------FLVQLVLMGFVETKRYMDFVSPG 166
Query: 179 PLGEV------------TDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
+ +P YPGG +PLGLA D + K+KEIKNGRLAM +M G
Sbjct: 167 SQAKEGSFFGLEASLKGLEPGYPGGPLLNPLGLAKDINNAHDWKLKEIKNGRLAMVAMLG 226
Query: 226 FFVQAIVTGKGPLENLADHLADP 248
FVQA VT GP++NL +HL++P
Sbjct: 227 IFVQASVTHVGPIDNLVEHLSNP 249
>gi|145350546|ref|XP_001419664.1| chlorophyll a/b binding, possibly photosystem I light harvesting
complex [Ostreococcus lucimarinus CCE9901]
gi|144579896|gb|ABO97957.1| chlorophyll a/b binding, possibly photosystem I light harvesting
complex [Ostreococcus lucimarinus CCE9901]
Length = 235
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 99/199 (49%), Gaps = 29/199 (14%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
P ++L G PGDYG+D LSADPE + E+ H RWAMLG GCV PELL + GV
Sbjct: 45 PAAHLDGSLPGDYGFDPLSLSADPEMRQWMVQAELQHARWAMLGVAGCVAPELLTKIGVA 104
Query: 124 FGEAVWFKAGA-QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 182
W A Q ++ GG +L Q + WA + ++ P
Sbjct: 105 -DLPNWVDAATYQYWAPGG-------TLFFIQMAMFNWA-------EIRRWQDMKNPGSV 149
Query: 183 VTDPL-------------YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 229
TDPL YP G FD G A D + AELK+KEIKNGRLAM + G Q
Sbjct: 150 NTDPLFGYNSNDTNTDVGYPKGLFDKFGWAKDEKTTAELKLKEIKNGRLAMLAFLGICAQ 209
Query: 230 AIVTGKGPLENLADHLADP 248
+ TG GP+ENL H+ +P
Sbjct: 210 YVQTGVGPVENLFSHMGNP 228
>gi|307104824|gb|EFN53076.1| hypothetical protein CHLNCDRAFT_36644 [Chlorella variabilis]
Length = 275
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 135/274 (49%), Gaps = 36/274 (13%)
Query: 6 MALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPF----- 60
M + +SF G A+ A S + + + +R GS+ GS +RV G
Sbjct: 1 MQVVTSFSGVALRPAQSVSRPARRSSVVVRSEGSE----GSELAKVERVAKAGGLYQNFT 56
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 114
S + YL G PGD+G+D GL DPE F L EVIHCRWAMLG G + P
Sbjct: 57 SSQALGYLDGTLPGDFGFDPLGL-CDPEGAGGFITPEWLAYSEVIHCRWAMLGIAGFLAP 115
Query: 115 ELLARNGVKFG---EAVWFKAGA-QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 170
E+LA G EAVWF++G + G + +L ++I+ +A +
Sbjct: 116 EVLATIGAIPASPEEAVWFRSGVIPPAGQYGAYWTDAYTLFWVEAIMMNFA----ELKRW 171
Query: 171 EGYRIAGGP-----------LGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRL 218
+ Y+ G G +P YPGG F + L L PEA +L+ EI+NGRL
Sbjct: 172 QDYQSPGSQGKQYFLGLEAVFGGSGNPAYPGGQFFNMLNLGKTPEAMKKLQTNEIRNGRL 231
Query: 219 AMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
AM + G F QA++T KGP NL DHLADP++NN
Sbjct: 232 AMIACLGCFGQAVMTTKGPFANLLDHLADPISNN 265
>gi|145078792|tpg|DAA05884.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca3 [Euglena gracilis]
Length = 295
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 117/228 (51%), Gaps = 39/228 (17%)
Query: 27 SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 86
S G++S G +S S+ +R+ + + PP+YLTGEFPGD G+D AGLSAD
Sbjct: 59 STRGQVSGSTRGQRSASTRGSASVEERLLWFPNVT--PPAYLTGEFPGDRGFDPAGLSAD 116
Query: 87 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG 146
PETF + R E+IH R AML +G + P+ L G+ WF+A A G+D
Sbjct: 117 PETFDRMRIAEIIHGRVAMLAVVGALVPDFL-------GKGNWFEAPAI----AGID--- 162
Query: 147 NPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP--LYPGGSFDPLGLADDPEA 204
I Q ++G G G L + ++P +YPG FDPL L D
Sbjct: 163 ------------IGDVQQFILG--YGVFEFGRGLNKSSNPAAIYPG--FDPLNLTSD--- 203
Query: 205 FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
K EIKNGRLA+ +M GF VQ V G PL NL+DHL P+ N
Sbjct: 204 --YTKEAEIKNGRLALTAMLGFEVQRHVVGGSPLANLSDHLQQPLKFN 249
>gi|255538312|ref|XP_002510221.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223550922|gb|EEF52408.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 269
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 106/194 (54%), Gaps = 14/194 (7%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+ P YL G GDYG+D GL DPE+ + E++H R+AMLG G +F +LL G+
Sbjct: 68 DSPPYLDGTLAGDYGFDPLGLGEDPESLKWYVQAELVHARFAMLGIAGILFTDLLRVTGI 127
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV-------EGYRI 175
+ VW++AGA + ++ +L+ Q + +A M V EG
Sbjct: 128 R-KLPVWYEAGAVKY-----EFASTRTLLVVQLLWMGYAETRRYMDYVSPGSQNKEGSFF 181
Query: 176 AGGPLGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
E +P YPGG +P GLA D + + K+KEIKNGRLAM +M G FVQA VT
Sbjct: 182 GMEAALEGLEPGYPGGPLLNPFGLAKDIRSARDWKLKEIKNGRLAMVAMLGIFVQAAVTH 241
Query: 235 KGPLENLADHLADP 248
GP++NL +HL+DP
Sbjct: 242 TGPIDNLLEHLSDP 255
>gi|218202214|gb|EEC84641.1| hypothetical protein OsI_31519 [Oryza sativa Indica Group]
Length = 264
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 120/248 (48%), Gaps = 39/248 (15%)
Query: 29 GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADP 87
G R K G +V GPDR + F G PP +L G PGD+G+D GL +DP
Sbjct: 38 GHRAGATKGGVSAVCEP---LGPDRPLW---FPGSSPPPWLDGSLPGDFGFDPLGLGSDP 91
Query: 88 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGN 147
E + E++H RWAML A G + PE+L + G + W AGA+ DY +
Sbjct: 92 ELLRWFAQAELMHSRWAMLAAAGILVPEVLEKWGF-MEDYSWIDAGAR-------DYFAD 143
Query: 148 PSLIHAQSILAIWACQVVLMGAVEGYRIAG--------------GPLGEVTDPLYPGGSF 193
P ++ Q+ LMG EG R A V D YPGG +
Sbjct: 144 P--------WTLFVSQMALMGWAEGRRWADYLNPGCVAVEPRLPNRRNPVPDVGYPGGLW 195
Query: 194 DPLGL--ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 251
G PE L+ KEIKNGRLAM + GF+ QA+ TG+GP++NL HLADP +
Sbjct: 196 FDWGNWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAVYTGEGPIDNLLHHLADPGHC 255
Query: 252 NAWAYATN 259
N ++ T+
Sbjct: 256 NVFSAFTS 263
>gi|384253051|gb|EIE26526.1| hypothetical protein COCSUDRAFT_52367 [Coccomyxa subellipsoidea
C-169]
Length = 246
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 105/207 (50%), Gaps = 30/207 (14%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
E PSYL GE PGD+G+D L DP ++ E+ + RWAML A G +F +LL G
Sbjct: 46 EIPSYLKGELPGDFGFDPLRLGEDPAALKWYQQAELQNGRWAMLAAAGILFVDLLGHLGA 105
Query: 123 KFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL 180
A WFKA + + +L + +L W V Y+ P
Sbjct: 106 GGPAAATPWFKASDFTY------FAPTSTLFIVELLLFAWV-------EVRRYQDMVKPG 152
Query: 181 GEVTDPL-------------YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 227
DP+ YPGG FDPLG + AELK+KEIKN RLAM ++ GFF
Sbjct: 153 STNQDPIFSQYSLPSGNEPGYPGGIFDPLGYSKG--NMAELKLKEIKNARLAMLAVLGFF 210
Query: 228 VQAIVTGKGPLENLADHLADPVNNNAW 254
VQA TGK PL++L+ HLADP +NN +
Sbjct: 211 VQAKTTGKTPLDSLSSHLADPWSNNVF 237
>gi|224137478|ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Populus trichocarpa]
gi|222835451|gb|EEE73886.1| light-harvesting complex I protein Lhca5 [Populus trichocarpa]
Length = 266
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 14/194 (7%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP YL G GD+G+D GL DP++ + E++H R+AM G G +F +LL G+
Sbjct: 65 DPPPYLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHARFAMAGVAGILFTDLLRVTGI 124
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV-------EGYRI 175
+ VW++AGA F ++ +LI Q +L +A M V EG
Sbjct: 125 R-KLPVWYEAGAVKF-----EFASTRTLIVVQLLLMGFAETKRYMDFVSPGSQAKEGSFF 178
Query: 176 AGGPLGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 234
E +P YPGG +PLGLA D E K+KEIKNGRLAM +M G FVQA VT
Sbjct: 179 GLESALEGLEPGYPGGPLLNPLGLARDIENAHVWKLKEIKNGRLAMVAMVGIFVQAAVTH 238
Query: 235 KGPLENLADHLADP 248
GP++NL +HL++P
Sbjct: 239 AGPIDNLIEHLSNP 252
>gi|414589586|tpg|DAA40157.1| TPA: hypothetical protein ZEAMMB73_160322 [Zea mays]
Length = 232
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 111/220 (50%), Gaps = 35/220 (15%)
Query: 50 GPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 108
GPDR + F G PP +L G PGD+G+D GL ++PE + E++H RWAML A
Sbjct: 23 GPDRPIW---FPGSSPPPWLDGSLPGDFGFDPLGLGSEPELLRWFAQAELMHGRWAMLAA 79
Query: 109 LGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG 168
G + P+LLAR G WF AG++ +Y +P ++ Q+ LMG
Sbjct: 80 AGILVPDLLARWGFIDAGFSWFDAGSR-------EYFADP--------WTLFVSQMALMG 124
Query: 169 AVEGYRIAG--------------GPLGEVTDPLYPGG-SFDPLGLAD-DPEAFAELKVKE 212
EG R A V D YPGG FD PE L+ KE
Sbjct: 125 WAEGRRWADYLRPGCVDIEPRFPNRKNPVPDVGYPGGLWFDWANWGRGSPEPVMVLRTKE 184
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
IKNGRLAM + GF+ QA+ TG+GP++NL HLADP + N
Sbjct: 185 IKNGRLAMLAFVGFWFQAVYTGQGPIDNLLAHLADPGHCN 224
>gi|157965821|gb|ABW06947.1| chloroplast light-harvesting complex I protein precursor [Euglena
gracilis]
Length = 926
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 105/192 (54%), Gaps = 35/192 (18%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP++LTGEFPGD G+D GLS DP+ FA+ R EV H R AMLG +GCV E L
Sbjct: 17 PPAHLTGEFPGDRGFDPLGLSKDPKVFARMRISEVFHGRLAMLGIVGCVGQEWL------ 70
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG---PL 180
F + WF +S+ L LG + A QV+ +E +R GG
Sbjct: 71 FNKGAWFD-----YSDFDLPRLG------------LIALQVI--APLEYWRGNGGFSWNG 111
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
+ D YPG FDPLGL + + K++EIKNGRLAM +M G VQ+ +TGK PL N
Sbjct: 112 NDGPDRSYPG--FDPLGLTTE-----DTKLREIKNGRLAMSAMLGLEVQSHITGKSPLTN 164
Query: 241 LADHLADPVNNN 252
L DHL+ P N
Sbjct: 165 LGDHLSSPFTAN 176
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 102/193 (52%), Gaps = 37/193 (19%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP+YLTGEFP D G+D AGL+ADP+ + + R EV + R AML +GCV+PELL
Sbjct: 572 PPAYLTGEFPADRGFDPAGLAADPKVYERMRVAEVFNGRLAMLAIVGCVYPELL------ 625
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG-- 181
G VWF+ ++ D+ A+ + QVV +E +R GG G
Sbjct: 626 -GNGVWFEVWNKV------DFYR----------FALISLQVV--APLEYWRGNGG-FGWD 665
Query: 182 --EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
E D YPG FDP L + K EIKNGRLAM MFG VQ VT +GP+
Sbjct: 666 GEEKYDRSYPG--FDPCNLTTE-----YTKAAEIKNGRLAMIGMFGLEVQNHVTAQGPVA 718
Query: 240 NLADHLADPVNNN 252
NL +HL P+ N
Sbjct: 719 NLIEHLRHPLAAN 731
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 91/190 (47%), Gaps = 30/190 (15%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP++LTGE+P D G+D L+ADP +A+ R EV H R +ML +G + PELL
Sbjct: 761 QPPAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLSMLAIVGSILPELL----- 815
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 182
G+ WF+ G + I IL A G+ G
Sbjct: 816 --GKGAWFEVGNSVDG------------IKLGFILMAIAAPTEYWRGNGGFNWDKG---- 857
Query: 183 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 242
D YPG FDPL L D K EIKNGRLAM + G Q + TG+ PL NLA
Sbjct: 858 TADRSYPG--FDPLKLTTD-----YTKAAEIKNGRLAMTGLLGLTFQYLATGESPLANLA 910
Query: 243 DHLADPVNNN 252
HLA+PV N
Sbjct: 911 AHLANPVGAN 920
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 110/233 (47%), Gaps = 49/233 (21%)
Query: 22 SGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTA 81
+ N L+ GG ++M T K P + P G PSYLTG++ GD G+D A
Sbjct: 174 TANILTGGGSVAMFSTSGKV---DRPLWFP---------GGYAPSYLTGQYFGDRGFDPA 221
Query: 82 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGG 141
GL+ADP+ F + R EV H R AML +G V P++L G+ W++A
Sbjct: 222 GLAADPKVFERMRVSEVYHGRLAMLAIVGAVVPDIL-------GKGAWYEA--------- 265
Query: 142 LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL--YPGGSFDPLGLA 199
AQ+ I +V + A G L +DP YPG FDPL L
Sbjct: 266 -----------AQNA-GIGVNEVAVFTAAYGVVEVARGLKANSDPTKNYPG--FDPLKLT 311
Query: 200 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
D K EIKNGRLA+ M G VQ VTG PL NL +H+ P+N+N
Sbjct: 312 TD-----YTKEAEIKNGRLALTGMLGLEVQRHVTGVSPLVNLVEHVKHPLNHN 359
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 91/190 (47%), Gaps = 30/190 (15%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP++LTGE+P D G+D L+ADP +A+ R EV H R +ML +G + PELL
Sbjct: 388 QPPAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLSMLAIVGSIVPELL----- 442
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 182
G+ WF+ G + I IL A G+ G
Sbjct: 443 --GKGAWFEVGNSVDG------------IKLGFILMAIAAPTEYWRGNGGFNWDKG---- 484
Query: 183 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 242
D YPG FDPL L D K EIKNGRLAM + G Q + TG+ PL NLA
Sbjct: 485 TADRSYPG--FDPLKLTTD-----YTKAAEIKNGRLAMTGLLGLTFQYLATGESPLANLA 537
Query: 243 DHLADPVNNN 252
HLA+PV N
Sbjct: 538 AHLANPVGAN 547
>gi|358346846|ref|XP_003637475.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355503410|gb|AES84613.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 294
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 135/288 (46%), Gaps = 72/288 (25%)
Query: 4 STMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGE 63
S M S +F+G+ + ++++ +R + +V + + PDR + F G
Sbjct: 24 SPMGTSKAFLGRKL-------KVNSNIAAPVRVRSTTTVCAAAE---PDRPLW---FPGS 70
Query: 64 -PPSYLTGEFPGDYGWDTAGL--------------------------SADPETFAKNREL 96
PP +L G PGD+G+D GL ++DPE+ N +
Sbjct: 71 TPPPWLDGSLPGDFGFDPLGLYNGGLIILAGNTNDHNINQSFGCDSTASDPESLKWNVQA 130
Query: 97 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 156
E++HCRWAMLGA G PE L + G+ W+ AG Q +Y + +
Sbjct: 131 ELVHCRWAMLGAAGIFIPEFLTKIGI-LNTPSWYTAGEQ-------EYFTDTT------- 175
Query: 157 LAIWACQVVLMGAVEGYRIAG--GPLGEVTDPL------------YPGGS-FDPLGLAD- 200
++ +++ +G EG R A P TDP+ YPGG FDPLG
Sbjct: 176 -TLFIVELIFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSG 234
Query: 201 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
P+ EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP
Sbjct: 235 SPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 282
>gi|308808233|ref|XP_003081427.1| PSI-associated light-harvesting chlorophyll a/b binding protein,
(IC) [Ostreococcus tauri]
gi|63029293|gb|AAY27545.1| chloroplast light-harvesting complex I protein precursor Lhca2
[Ostreococcus tauri]
gi|116059889|emb|CAL55596.1| PSI-associated light-harvesting chlorophyll a/b binding protein,
(IC) [Ostreococcus tauri]
Length = 242
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 98/199 (49%), Gaps = 29/199 (14%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
P +L G PGD+G+D LSADPE + E+ H RWAMLG G V PELL + GV
Sbjct: 48 PAPHLDGSLPGDFGFDPLSLSADPEMRKWMVQAELQHARWAMLGVAGAVAPELLTKIGVA 107
Query: 124 FGEAVWFKAGA-QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 182
W AG Q ++ G L Q + WA V ++ P
Sbjct: 108 -DLPNWVDAGTYQYWAPAG-------PLFFIQMAMFNWA-------EVRRWQDMKNPGSM 152
Query: 183 VTDPL-------------YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 229
TDPL YPGG FD LG A DP ELK+KEIKNGRLAM + G Q
Sbjct: 153 NTDPLFGYNSNDTNTDVGYPGGLFDKLGYAKDPAKAKELKLKEIKNGRLAMVAFLGICAQ 212
Query: 230 AIVTGKGPLENLADHLADP 248
+ TG+GP+ENL H+A P
Sbjct: 213 YVQTGQGPVENLFSHIASP 231
>gi|356510907|ref|XP_003524175.1| PREDICTED: uncharacterized protein LOC100789010 [Glycine max]
Length = 320
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 76/99 (76%), Gaps = 3/99 (3%)
Query: 154 QSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEI 213
+SILA+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEI
Sbjct: 210 ESILAVVA-EIVLVGGAEYYRIING--LDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEI 266
Query: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 267 KNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN 305
>gi|224140409|ref|XP_002323575.1| predicted protein [Populus trichocarpa]
gi|222868205|gb|EEF05336.1| predicted protein [Populus trichocarpa]
Length = 283
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 131/291 (45%), Gaps = 73/291 (25%)
Query: 10 SSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDR-VKYLGPFSGEPPSYL 68
SSF+G V + SN GRI R K S PDR + Y G + P YL
Sbjct: 11 SSFIGTRVP-----DVYSNAGRIQARFGFGKKAPKKSIKTIPDRPLWYPG---AKAPEYL 62
Query: 69 TGEFPGDYGWDTAGLSADPE-----------TFAKN------------------------ 93
G GDYG+D GL E AKN
Sbjct: 63 DGSLVGDYGFDPFGLGRPAEYLQFELDSLDQNLAKNLAGDIIGTRTEVSDVKSTPFQPYS 122
Query: 94 --------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYL 145
RE E+IH RWAML LG + E L GV W AG EG YL
Sbjct: 123 EVFGLQRFRECELIHGRWAMLATLGALSVEWL--TGV-----TWQDAGKVELVEGS-SYL 174
Query: 146 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP---LYPGGSF-DPLGLADD 201
G P +++ I +V+++G +E R A DP LYPGG+F DPLGLA D
Sbjct: 175 GQPLPFSITTLILI---EVLVIGYIEFQRNAE------LDPEKRLYPGGNFFDPLGLAAD 225
Query: 202 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
PE A L++ EIK+ RLAM + GF VQA VTGKGPL N A HL+DP++
Sbjct: 226 PEKKATLQLAEIKHARLAMVAFLGFAVQAWVTGKGPLNNWATHLSDPLHTT 276
>gi|49388156|dbj|BAD25284.1| putative chlorophyll a/b-binding protein type III precursor [Oryza
sativa Japonica Group]
gi|49388341|dbj|BAD25451.1| putative chlorophyll a/b-binding protein type III precursor [Oryza
sativa Japonica Group]
gi|125538483|gb|EAY84878.1| hypothetical protein OsI_06243 [Oryza sativa Indica Group]
gi|125581168|gb|EAZ22099.1| hypothetical protein OsJ_05758 [Oryza sativa Japonica Group]
gi|215678980|dbj|BAG96410.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679371|dbj|BAG96511.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215686386|dbj|BAG87647.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737482|dbj|BAG96612.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737505|dbj|BAG96635.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737512|dbj|BAG96642.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737560|dbj|BAG96690.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737570|dbj|BAG96700.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737580|dbj|BAG96710.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737621|dbj|BAG96751.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737634|dbj|BAG96764.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737653|dbj|BAG96783.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737729|dbj|BAG96859.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737785|dbj|BAG96915.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765646|dbj|BAG87343.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767462|dbj|BAG99690.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 269
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 120/229 (52%), Gaps = 38/229 (16%)
Query: 50 GPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRW 103
G DR + S + SYL G PGD+G+D GLS DPE F + R L EV + R
Sbjct: 45 GADRQLWFA--SKQSLSYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEVFNGRT 101
Query: 104 AMLGALGCVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 161
AM+G +G V PELL + G+ E WF+ G I G Y +P ++
Sbjct: 102 AMMGVVGMVAPELLGKLGLVPAETAIPWFQTGV-IPPAGTYTYWADP--------YTLFV 152
Query: 162 CQVVLMGAVEGYRIAG----GPLGEVT------------DPLYPGGS-FDPLGLADDPEA 204
++ L+G E R G +G+ +P YPGG F+PLG EA
Sbjct: 153 FELALVGFAEHRRFQDWYTPGSMGKQYFLGLEKYLAGSGEPAYPGGPLFNPLGFGTKSEA 212
Query: 205 -FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
ELK+KEIKNGRLAM + GF VQA+ TG GP++NL DHLADPV+NN
Sbjct: 213 EMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNN 261
>gi|145079812|tpg|DAA05938.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca3 [Micromonas sp. CCMP490]
Length = 309
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 120/226 (53%), Gaps = 39/226 (17%)
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGAL 109
YL S + +YL G PGD+G+D G+S DPE F + L EVIH RWAMLG
Sbjct: 86 YLMGVSDQNMTYLDGTLPGDFGFDPLGMS-DPEGQGGFVNPQWLAYSEVIHGRWAMLGVA 144
Query: 110 GCVFPELLARNGVKFGEA--VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVV-- 165
G V PE+L G+ + VWFK+GA I +G DY +P+ I +++ + +V
Sbjct: 145 GVVAPEVLGGMGIIPADTGLVWFKSGA-IPPQGTFDYWADPTTIFWVNMVLMNFAEVKRG 203
Query: 166 -------------LMGAVEGYRIAGGPLGEVTDPLYPGG---SFDPLGLADDPEAFAELK 209
LMG +G+ +G P YPGG +F LG D A+++
Sbjct: 204 QDYWYPGSQGETPLMGWEKGFAGSGAPA-------YPGGKYFNFANLGKTD----MAKMQ 252
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA 255
KEIKNGRLAM + G VQA+ TG+GP +N+ DH++DP NN A
Sbjct: 253 KKEIKNGRLAMMAFLGIAVQAVATGEGPFKNIVDHISDPFANNMLA 298
>gi|449466336|ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
[Cucumis sativus]
gi|449522610|ref|XP_004168319.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
[Cucumis sativus]
Length = 259
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 109/204 (53%), Gaps = 34/204 (16%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+PP +L G GD+G+D GL DP++ + E++HCR+AMLG G + +LL G+
Sbjct: 58 DPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGI 117
Query: 123 KFGEAVWFKAGAQIFSEGGLDY-LGNPSLIHAQSILAIWACQVVLMGAVEGYRIA----- 176
VW+ AGA ++Y N ++ Q++LMG VE R
Sbjct: 118 S-ELPVWYNAGA-------VEYGFANKR--------TLFIVQLLLMGFVETKRYMDFKSP 161
Query: 177 GGPLGEVT-----------DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224
G E T +P YPGG +PLG+A D + + K+KEIKNGRLAM +M
Sbjct: 162 GSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAML 221
Query: 225 GFFVQAIVTGKGPLENLADHLADP 248
G FVQA VT GP++NL +HL++P
Sbjct: 222 GIFVQAYVTHTGPIDNLVEHLSNP 245
>gi|297844880|ref|XP_002890321.1| hypothetical protein ARALYDRAFT_472139 [Arabidopsis lyrata subsp.
lyrata]
gi|297336163|gb|EFH66580.1| hypothetical protein ARALYDRAFT_472139 [Arabidopsis lyrata subsp.
lyrata]
Length = 269
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 122/243 (50%), Gaps = 21/243 (8%)
Query: 28 NGGRISMR---KTGSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGL 83
GGR+S R K VSS PDR + F G PP +L G PGD+G+D GL
Sbjct: 36 TGGRMSERLVVARAGKEVSSVCEPLPPDRPLW---FPGSAPPEWLDGSLPGDFGFDPLGL 92
Query: 84 SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLD 143
+DP+T + E+IH RWAML G + PE L R G W++AG++ +
Sbjct: 93 GSDPDTLKWFAQAELIHSRWAMLAVTGILIPECLERLGF-IENFSWYEAGSREY------ 145
Query: 144 YLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLG 197
+ + +L AQ +L WA ++ G+V+ + D YPGG FD +
Sbjct: 146 FADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPKYPHKVNPKPDVGYPGGLWFDFMM 205
Query: 198 LAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAY 256
PE L+ KEIKNGRLAM + GF QA T + P+ENL HLADP + N ++
Sbjct: 206 WGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQATYTSQDPIENLMAHLADPGHCNVFSA 265
Query: 257 ATN 259
T+
Sbjct: 266 FTS 268
>gi|115479363|ref|NP_001063275.1| Os09g0439500 [Oryza sativa Japonica Group]
gi|51091350|dbj|BAD36085.1| putative chlorophyll a/b-binding protein type II [Oryza sativa
Japonica Group]
gi|51091400|dbj|BAD36143.1| putative chlorophyll a/b-binding protein type II [Oryza sativa
Japonica Group]
gi|113631508|dbj|BAF25189.1| Os09g0439500 [Oryza sativa Japonica Group]
gi|215695401|dbj|BAG90592.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 264
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 119/248 (47%), Gaps = 39/248 (15%)
Query: 29 GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADP 87
G R K G +V GPDR + F G PP +L G PGD+G+D GL +DP
Sbjct: 38 GHRAGATKGGVSAVCEP---LGPDRPLW---FPGSSPPPWLDGSLPGDFGFDPLGLGSDP 91
Query: 88 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGN 147
E + E++H RWAML G + PE+L + G + W AGA+ DY +
Sbjct: 92 ELLRWFAQAELMHSRWAMLAVAGILVPEVLEKWGF-MEDYSWIDAGAR-------DYFAD 143
Query: 148 PSLIHAQSILAIWACQVVLMGAVEGYRIAG--------------GPLGEVTDPLYPGGSF 193
P ++ Q+ LMG EG R A V D YPGG +
Sbjct: 144 P--------WTLFVSQMALMGWAEGRRWADYLNPGCVAVEPRLPNRRNPVPDVGYPGGLW 195
Query: 194 DPLGL--ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 251
G PE L+ KEIKNGRLAM + GF+ QA+ TG+GP++NL HLADP +
Sbjct: 196 FDWGNWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAVYTGEGPIDNLLHHLADPGHC 255
Query: 252 NAWAYATN 259
N ++ T+
Sbjct: 256 NVFSAFTS 263
>gi|384251522|gb|EIE24999.1| light-harvesting chlorophyll a/b-binding protein Lhca3 [Coccomyxa
subellipsoidea C-169]
Length = 274
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 109/204 (53%), Gaps = 26/204 (12%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
E PSYL GE GDYGWD GL A PE R+ E++H RWAML G +LA+ V
Sbjct: 52 EAPSYLNGELAGDYGWDPLGLGAKPEALKWYRQAELVHARWAMLAVAG-----ILAQEIV 106
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR-------- 174
K G V+F + G+++ G ++ +LA W + +L VE R
Sbjct: 107 KPG--VFFYNAGLPENLPGINFGGPEGKVNLGGLLA-W--EFLLFHWVEVRRWQDIKKKD 161
Query: 175 -IAGGPL---GEVTDPL--YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 228
+ P+ +V +P YPGG FDP G + F E++ KEIKNGRLAM + GF +
Sbjct: 162 SVNQDPIFKGNKVPNPELGYPGGIFDPFGFSKG--NFKEVQTKEIKNGRLAMVAFVGFII 219
Query: 229 QAIVTGKGPLENLADHLADPVNNN 252
QA TG+GPL NL HLA+P NN
Sbjct: 220 QAQATGQGPLANLGAHLANPFGNN 243
>gi|303290578|ref|XP_003064576.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226454174|gb|EEH51481.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas pusilla CCMP1545]
Length = 286
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 140/285 (49%), Gaps = 46/285 (16%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGS---------KSVSSGSPWYGP 51
MA T++++S+F A + S + +R G K+V P
Sbjct: 1 MAAMTVSMTSAFTRGAARVTASAPKARKLRSFVVRAEGEEAPAAEEAPKAVVKAQPRSKD 60
Query: 52 DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAM 105
D YL S + +YL G PGD+G+D G+S DPE F + L EVIH RWAM
Sbjct: 61 DL--YLMGVSDQNMAYLDGTLPGDFGFDPLGMS-DPEGAGGFVNPQWLAYSEVIHGRWAM 117
Query: 106 LGALGCVFPELLARNGV--KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQ 163
LG G V PE+L + G+ + VWF +GA I +G DY NP I ++ + +
Sbjct: 118 LGVAGIVAPEILGQAGLIPESTGLVWFTSGA-IPPQGTFDYWANPMTIFWVNMCMMNFAE 176
Query: 164 VV---------------LMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAE 207
+ LMG +G+ +G +P YPGG F+ GL D A+
Sbjct: 177 IKRGQDYWYPGSQAEQPLMGWEKGFAGSG-------NPAYPGGKYFNFAGLGKDD--MAK 227
Query: 208 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
++ KEIKNGRLAM + G VQA+VTG+GP +N+ DH+ADP N
Sbjct: 228 MQKKEIKNGRLAMMAFLGCMVQAVVTGEGPWKNICDHVADPFGAN 272
>gi|27754356|gb|AAO22627.1| putative light-harvesting chlorophyll a/b binding protein
[Arabidopsis thaliana]
Length = 270
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 121/245 (49%), Gaps = 22/245 (8%)
Query: 27 SNGGRISMRK----TGSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTA 81
S GGR+ + K VSS PDR + F G PP +L G PGD+G+D
Sbjct: 35 STGGRLMRERLVVVRAGKEVSSVCEPLPPDRPLW---FPGSSPPEWLDGSLPGDFGFDPL 91
Query: 82 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGG 141
GL +DP+T + E+IH RWAML G + PE L R G W+ AG++ +
Sbjct: 92 GLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECLERLGF-IENFSWYDAGSREY---- 146
Query: 142 LDYLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDP 195
+ + +L AQ +L WA ++ G+V+ + D YPGG FD
Sbjct: 147 --FADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPKYPHKVNPKPDVGYPGGLWFDF 204
Query: 196 LGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 254
+ PE L+ KEIKNGRLAM + GF QA T + P+ENL HLADP + N +
Sbjct: 205 MMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQATYTSQDPIENLMAHLADPGHCNVF 264
Query: 255 AYATN 259
+ T+
Sbjct: 265 SAFTS 269
>gi|323388125|gb|ADX60322.1| chlorophyll a-b binding protein of LHCII [Furcellaria lumbricalis]
Length = 86
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 66/79 (83%)
Query: 182 EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
E DPLYPG +FDPLGLADDP+ FAELK KEIKNGRLA FSMFG+FVQA+ TGKGP++N
Sbjct: 1 EGLDPLYPGEAFDPLGLADDPDTFAELKTKEIKNGRLAQFSMFGYFVQALQTGKGPVQNW 60
Query: 242 ADHLADPVNNNAWAYATNF 260
++H+ADP N N + YAT F
Sbjct: 61 SEHVADPWNVNGFNYATKF 79
>gi|15221956|ref|NP_173349.1| light-harvesting complex I chlorophyll a/b binding protein 2
[Arabidopsis thaliana]
gi|21554357|gb|AAM63464.1| PSI type II chlorophyll a/b-binding protein, putative [Arabidopsis
thaliana]
gi|56381917|gb|AAV85677.1| At1g19150 [Arabidopsis thaliana]
gi|58331805|gb|AAW70400.1| At1g19150 [Arabidopsis thaliana]
gi|332191690|gb|AEE29811.1| light-harvesting complex I chlorophyll a/b binding protein 2
[Arabidopsis thaliana]
Length = 270
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 121/245 (49%), Gaps = 22/245 (8%)
Query: 27 SNGGRISMRK----TGSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTA 81
S GGR+ + K VSS PDR + F G PP +L G PGD+G+D
Sbjct: 35 STGGRLMRERLVVVRAGKEVSSVCEPLPPDRPLW---FPGSSPPEWLDGSLPGDFGFDPL 91
Query: 82 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGG 141
GL +DP+T + E+IH RWAML G + PE L R G W+ AG++ +
Sbjct: 92 GLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECLERLGF-IENFSWYDAGSREY---- 146
Query: 142 LDYLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDP 195
+ + +L AQ +L WA ++ G+V+ + D YPGG FD
Sbjct: 147 --FADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPKYPHKVNPKPDVGYPGGLWFDF 204
Query: 196 LGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 254
+ PE L+ KEIKNGRLAM + GF QA T + P+ENL HLADP + N +
Sbjct: 205 MMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQATYTSQDPIENLMAHLADPGHCNVF 264
Query: 255 AYATN 259
+ T+
Sbjct: 265 SAFTS 269
>gi|118489398|gb|ABK96503.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 283
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 131/291 (45%), Gaps = 73/291 (25%)
Query: 10 SSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDR-VKYLGPFSGEPPSYL 68
SSF+G + + SN GRI R K S PDR + Y G + P YL
Sbjct: 11 SSFIGTRLP-----DVYSNAGRIQARFGFGKKAPKKSIKTIPDRPLWYPG---AKAPEYL 62
Query: 69 TGEFPGDYGWDTAGLSADPE-----------TFAKN------------------------ 93
G GDYG+D GL E AKN
Sbjct: 63 DGSLVGDYGFDPFGLGRPAEYLQFELDSLDQNLAKNLAGDIIGTRTEVSDVKSTPFQPYS 122
Query: 94 --------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYL 145
RE E+IH RWAML LG + E L GV W AG EG YL
Sbjct: 123 EVFGLQRFRECELIHGRWAMLATLGALSVEWL--TGV-----TWQDAGKVELVEGS-SYL 174
Query: 146 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP---LYPGGSF-DPLGLADD 201
G P +++ I +V+++G +E R A DP LYPGG+F DPLGLA D
Sbjct: 175 GQPLPFSITTLILI---EVLVIGYIEFQRNAE------LDPEKRLYPGGNFFDPLGLAAD 225
Query: 202 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
PE A L++ EIK+ RLAM + GF VQA VTGKGPL N A HL+DP++
Sbjct: 226 PEKKATLQLAEIKHARLAMVAFLGFAVQAWVTGKGPLNNWATHLSDPLHTT 276
>gi|311994|emb|CAA50763.1| light harvesting complex I chlorophyll binding protein [Pyrobotrys
stellata]
Length = 260
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 116/224 (51%), Gaps = 28/224 (12%)
Query: 60 FSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
F G P P YL GE GDYG+D G +P + E++HCRWAMLGA G + PE+
Sbjct: 34 FPGNPAPEYLKGELAGDYGFDPLGFGDEPRRLEWMVQAELVHCRWAMLGAAGILLPEIGN 93
Query: 119 RNGVK-----FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVE-- 171
+ G++ W++AG ++ +E G +G SL +L WA L V+
Sbjct: 94 KTGMQSAAPGLAFPHWWEAG-KVVAESGPWSMG--SLTFTMFLLMGWAEHKRLYDFVKPG 150
Query: 172 ----GYRIAGGPLGEVT---DPL------YPGGSFDPLGLADDPEAFAELKVKEIKNGRL 218
G+ A LG +T +PL YPGG FDP ++ + + K E+ NGRL
Sbjct: 151 SQAVGWAWAPLGLGSITGVEEPLVAKENGYPGGIFDPFQMSKNEAKYKWYKQSEVTNGRL 210
Query: 219 AMFSMFGFFVQAIVT-GKGPLENLADHLADPVNNNAWAYATNFV 261
AM +MFGF Q I GKGP++NL DH+++P +ATN V
Sbjct: 211 AMTAMFGFVSQHIAYPGKGPIDNLVDHVSNPTKVT---FATNGV 251
>gi|8954053|gb|AAF82226.1|AC069143_2 Contains similarity to a chlorophyll a/b-binding protein type II
from Arabidopsis thaliana gi|S46295 and contains a
chlorophyll A-B binding proteins PF|00504 domain
[Arabidopsis thaliana]
Length = 267
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 120/243 (49%), Gaps = 22/243 (9%)
Query: 27 SNGGRISMRK----TGSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTA 81
S GGR+ + K VSS PDR + F G PP +L G PGD+G+D
Sbjct: 35 STGGRLMRERLVVVRAGKEVSSVCEPLPPDRPLW---FPGSSPPEWLDGSLPGDFGFDPL 91
Query: 82 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGG 141
GL +DP+T + E+IH RWAML G + PE L R G W+ AG++ +
Sbjct: 92 GLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECLERLGF-IENFSWYDAGSREY---- 146
Query: 142 LDYLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDP 195
+ + +L AQ +L WA ++ G+V+ + D YPGG FD
Sbjct: 147 --FADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPKYPHKVNPKPDVGYPGGLWFDF 204
Query: 196 LGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 254
+ PE L+ KEIKNGRLAM + GF QA T + P+ENL HLADP + N +
Sbjct: 205 MMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQATYTSQDPIENLMAHLADPGHCNVF 264
Query: 255 AYA 257
+ +
Sbjct: 265 SVS 267
>gi|380447755|gb|AFD54060.1| morphogenesis protein [Leymus secalinus]
Length = 268
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 111/213 (52%), Gaps = 36/213 (16%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
+YL G PGD+G+D GLS DPE F + R L E+ + R AM+G +G + PE L +
Sbjct: 58 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGK 116
Query: 120 NGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
G+ E WF+AGA I G Y +P ++ ++ L+G E R+
Sbjct: 117 VGLVPSETAIPWFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQD 167
Query: 178 ----------------GPLGEVTDPLYPGGS-FDPLGLADDPEA-FAELKVKEIKNGRLA 219
LG DP YPGG F+PLG E ELK+KEIKNGRLA
Sbjct: 168 WYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTKSEKEMKELKLKEIKNGRLA 227
Query: 220 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
M + G +QAI TG GP +NL DHL+DPVNNN
Sbjct: 228 MLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 260
>gi|357153802|ref|XP_003576571.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Brachypodium distachyon]
Length = 272
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 116/227 (51%), Gaps = 20/227 (8%)
Query: 35 RKTGSKSVSSGSPWYGPDRVKYLGPFSG-EPPSYLTGEFPGDYGWDTAGLSADPETFAKN 93
R +K VS+ GPDR + F G PP +L G PGD+G+D GL ++PET
Sbjct: 49 RAGAAKGVSAVCEPLGPDRPVW---FPGTSPPPWLDGSLPGDFGFDPLGLGSEPETLRWF 105
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP-SLIH 152
+ E++H RWAML G + PE+L + G E W+ AG + +Y +P +L
Sbjct: 106 AQAELMHSRWAMLAVAGILIPEILQKWGF-MEEFSWYTAGER-------EYFADPWTLFI 157
Query: 153 AQSILAIWACQVVLM-----GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGL--ADDPEAF 205
AQ L WA M G+V+ D YPGG + G PE
Sbjct: 158 AQMALMGWAEGRRWMDYLNPGSVDIEPRFPNRKNPTPDVGYPGGLWFDWGNWGRGSPEPV 217
Query: 206 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
L+ KEIKNGRLAM + GF+ QA+ TG+GP++NL HLADP + N
Sbjct: 218 MVLRTKEIKNGRLAMLAFVGFWFQAVYTGQGPVDNLLAHLADPGHCN 264
>gi|116783276|gb|ABK22868.1| unknown [Picea sitchensis]
Length = 233
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 113/244 (46%), Gaps = 62/244 (25%)
Query: 7 ALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPS 66
A +S VG+AV+L S + + + S++V + P + P PP
Sbjct: 38 AKASFLVGRAVSLRQSKAAMPRRAAVIV----SEAVQTERPLWFPGTT---------PPP 84
Query: 67 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 126
+L G P D+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ +
Sbjct: 85 WLDGSLPADFGFDPLGLGSDPETLKWNVQSELVHCRWAMLGAAGIFIPELLTKLGILNTD 144
Query: 127 AVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP 186
++ ++ G +G
Sbjct: 145 PIF-----------------------------------------PNNKLTGTDVG----- 158
Query: 187 LYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 244
YPGG FDPLG PE EL+ KEIKNGRLAM S+ G + QA TG GP++NL H
Sbjct: 159 -YPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLSVMGAWFQAEYTGTGPIDNLLAH 217
Query: 245 LADP 248
LADP
Sbjct: 218 LADP 221
>gi|145355794|ref|XP_001422134.1| photosystem I light harvesting complex, chlorophyll a/b binding
[Ostreococcus lucimarinus CCE9901]
gi|144582374|gb|ABP00451.1| photosystem I light harvesting complex, chlorophyll a/b binding
[Ostreococcus lucimarinus CCE9901]
Length = 281
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 111/216 (51%), Gaps = 36/216 (16%)
Query: 61 SGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 114
S + SYL G PGDYG+D GLS DPE F + L EVIH RWAMLG G V P
Sbjct: 64 SDQSLSYLDGSLPGDYGFDPLGLS-DPEGAGGFINPQWLAYSEVIHGRWAMLGVAGMVAP 122
Query: 115 ELLARNGVKFGEA--VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG 172
E+L G+ E VW+KAG I ++G DY NP I+ LM E
Sbjct: 123 EVLGGLGIIPQETGLVWYKAG-MIPAQGTYDYWANP--------FTIFWINAALMNFAEL 173
Query: 173 YRIAG----------------GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNG 216
R LG +P YPGG F+ +G A+++VKEIKNG
Sbjct: 174 RRAQDYWNPGSMGKQELIGWEKMLGGSGEPAYPGGFFNIMG--QGKSDMAKMRVKEIKNG 231
Query: 217 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
RLAM + F QA++TG+GP++NL DH++DP +N
Sbjct: 232 RLAMMACFACGAQAVMTGEGPVKNLIDHVSDPFGHN 267
>gi|224090986|ref|XP_002309134.1| light-harvesting complex II protein Lhcb4 [Populus trichocarpa]
gi|118489077|gb|ABK96345.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222855110|gb|EEE92657.1| light-harvesting complex II protein Lhcb4 [Populus trichocarpa]
Length = 285
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 125/280 (44%), Gaps = 78/280 (27%)
Query: 27 SNGGRISMR------KTGSKSVSSGSPWYGPDR-VKYLGPFSGEPPSYLTGEFPGDYGWD 79
SN GRI R K KS+ +P DR + Y G + P YL G GDYG+D
Sbjct: 23 SNSGRIQARFGFGGKKAPKKSIKPSTP----DRPLWYPG---AKAPEYLDGSLVGDYGFD 75
Query: 80 TAGLSADPE-----------TFAKN--------------------------------REL 96
GL E AKN RE
Sbjct: 76 PFGLGKPAEYLQFELDSLDQNLAKNLAGDIIGTRTEFADVKSTPFQPYSEVFGLQRFREC 135
Query: 97 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 156
E+IH RWAML LG + E L GV W AG EG YLG P SI
Sbjct: 136 ELIHGRWAMLATLGALSVEWL--TGV-----TWQDAGKVELVEGS-SYLGQPLPF---SI 184
Query: 157 LAIWACQVVLMGAVEGYRIAGGPLGEVTDP---LYPGGSF-DPLGLADDPEAFAELKVKE 212
A+ + V++G +E R A DP LYPGG F DPLGLA DPE A L++ E
Sbjct: 185 TALIWIEAVIIGYIEFQRNAE------LDPEKRLYPGGQFFDPLGLASDPEKKATLQLAE 238
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
IK+ RLAM + GF VQA VTGKGPL N A HL+DP++
Sbjct: 239 IKHARLAMVAFLGFAVQAWVTGKGPLNNWATHLSDPLHTT 278
>gi|326514018|dbj|BAJ92159.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 111/213 (52%), Gaps = 36/213 (16%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
+YL G PGD+G+D GLS DPE F + R L E+ + R AM+G +G + PE L +
Sbjct: 59 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGK 117
Query: 120 NGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
G+ E WF+AGA I G Y +P ++ ++ L+G E R+
Sbjct: 118 VGLVPPETAIPWFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQD 168
Query: 178 ----------------GPLGEVTDPLYPGGS-FDPLGLADDPEA-FAELKVKEIKNGRLA 219
LG DP YPGG F+PLG E ELK+KEIKNGRLA
Sbjct: 169 WYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTKSEKEMKELKLKEIKNGRLA 228
Query: 220 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
M + G +QAI TG GP +NL DHL+DPVNNN
Sbjct: 229 MLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 261
>gi|225580693|gb|ACN94454.1| photosystem I light-harvesting cholrophyll-a/b protein 3
[Dunaliella salina]
Length = 286
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 107/214 (50%), Gaps = 33/214 (15%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET--------FAKNREL---EVIHCRWAMLGALGCVFP 114
YL G PGDYG+D GL DP F R L EVIH RWAMLGA GC+ P
Sbjct: 68 KYLDGTLPGDYGFDPLGL-LDPTVSNGQGAGGFVNPRWLQYSEVIHARWAMLGAAGCIAP 126
Query: 115 ELLARNGVKFGEAV--WFKAGAQIFSEGGL--DYLGNPSLIHAQSILAIWACQVVLMGAV 170
E+L + GV E WF+ G + G+ D+ +P + ++AI Q + +
Sbjct: 127 EILGKAGVIPAETAVDWFRTG--VIPPAGVYKDFWADPFTLFFIEVVAI---QFAELKRL 181
Query: 171 EGYRIAG-----------GPLGEVTDPLYPGGSFDPLGLADDPEA-FAELKVKEIKNGRL 218
+ Y+ G G +P YPGG F EA +LK+ EIKNGRL
Sbjct: 182 QDYKNPGSQSRQYFLGLEGLFKGSDNPAYPGGPFFNFANFGKTEAEMKKLKLNEIKNGRL 241
Query: 219 AMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
AM +MFG+ QA++TG GP +NL HLADP N
Sbjct: 242 AMLAMFGYGAQAVITGDGPFDNLLAHLADPTGAN 275
>gi|87313175|gb|ABD37884.1| light-harvesting chlorophyll-a/b binding protein Lhca5.2
[Mesostigma viride]
gi|145079736|tpg|DAA05927.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca9 [Mesostigma viride]
Length = 225
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 102/193 (52%), Gaps = 33/193 (17%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP++L G PGDYG+D GL+ DP+ A E E + RWAM G G +F + L
Sbjct: 48 PPAHLNGTLPGDYGYDPIGLATDPDRLAWFVEAERTNGRWAMAGVAGILFTDAL-----H 102
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIW---ACQVVLMGAVEGYRIAG-GP 179
G A WF GA++ +S + +W + V+ G +E R+ G
Sbjct: 103 IGSAPWFSIGAEL-----------------ESPIPLWGLATIEFVIFGFLEMKRLEGWKK 145
Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
G+ + L FDPLG+ E+ VKE+KNGRLAMF+ GF VQA+VT +GP+
Sbjct: 146 TGQ--NGLLNWFPFDPLGMNSK-----EMMVKEVKNGRLAMFAWCGFMVQALVTREGPVT 198
Query: 240 NLADHLADPVNNN 252
NL H+ADP NNN
Sbjct: 199 NLEKHIADPFNNN 211
>gi|388513951|gb|AFK45037.1| unknown [Medicago truncatula]
Length = 267
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 112/230 (48%), Gaps = 36/230 (15%)
Query: 36 KTGSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
+ K VS PDR + F G PP +L G PGD+G+D GL +DPE
Sbjct: 45 RNAKKGVSDVCEPLPPDRPLW---FPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWLA 101
Query: 95 ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
+ E++H RWAMLG G + PE+L + G W+ AG+ ++Y +P+
Sbjct: 102 QAELMHARWAMLGVSGILIPEILEKIGY-VKNFSWYNAGS-------VEYFADPT----- 148
Query: 155 SILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPL------------YPGGS-FDPLGLA 199
++ Q+ LMG VEG R A P +P YPGG FDP+
Sbjct: 149 ---TLFIVQLALMGWVEGRRWADIVNPGSVDIEPKLPNRPNPKPDVGYPGGLWFDPMQWG 205
Query: 200 D-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
PE L+ KEIKNGRLAM + GF QA+ G P++NL HLADP
Sbjct: 206 RGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQAVYVGGSPIDNLMAHLADP 255
>gi|357450129|ref|XP_003595341.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355484389|gb|AES65592.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 267
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 118/241 (48%), Gaps = 36/241 (14%)
Query: 36 KTGSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
+ K VS PDR + F G PP +L G PG++G+D GL +DPE
Sbjct: 45 RNAKKGVSDVCEPLPPDRPLW---FPGSSPPEWLDGSLPGNFGFDPLGLGSDPELLKWLA 101
Query: 95 ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
+ E++H RWAMLG G + PE+L + G W+ AG+ ++Y +P+
Sbjct: 102 QAELMHARWAMLGVSGILIPEILEKIGY-VKNFSWYNAGS-------VEYFADPT----- 148
Query: 155 SILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPL------------YPGGS-FDPLGLA 199
++ Q+ LMG VEG R A P +P YPGG FDP+
Sbjct: 149 ---TLFIVQLALMGWVEGRRWADIVNPGSVDIEPKLPNRPNPKPDVGYPGGLWFDPMQWG 205
Query: 200 D-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT 258
PE L+ KEIKNGRLAM + GF QA+ G P++NL HLADP + N ++ T
Sbjct: 206 RGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQAVYVGGSPIDNLMAHLADPGHVNIFSAFT 265
Query: 259 N 259
+
Sbjct: 266 S 266
>gi|427338317|gb|AFY52157.1| chlorophyll binding protein, partial [Clermontia kohalae]
gi|427338319|gb|AFY52158.1| chlorophyll binding protein, partial [Clermontia kohalae]
gi|427338321|gb|AFY52159.1| chlorophyll binding protein, partial [Clermontia kohalae]
gi|427338323|gb|AFY52160.1| chlorophyll binding protein, partial [Clermontia kohalae]
gi|427338325|gb|AFY52161.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338327|gb|AFY52162.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338329|gb|AFY52163.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338331|gb|AFY52164.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338333|gb|AFY52165.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|427338335|gb|AFY52166.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|427338337|gb|AFY52167.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|427338339|gb|AFY52168.1| chlorophyll binding protein, partial [Clermontia grandiflora subsp.
grandiflora]
gi|427338341|gb|AFY52169.1| chlorophyll binding protein, partial [Clermontia grandiflora subsp.
grandiflora]
gi|427338343|gb|AFY52170.1| chlorophyll binding protein, partial [Clermontia grandiflora subsp.
grandiflora]
gi|427338345|gb|AFY52171.1| chlorophyll binding protein, partial [Clermontia grandiflora subsp.
grandiflora]
gi|427338347|gb|AFY52172.1| chlorophyll binding protein, partial [Clermontia micrantha]
gi|427338349|gb|AFY52173.1| chlorophyll binding protein, partial [Clermontia micrantha]
gi|427338351|gb|AFY52174.1| chlorophyll binding protein, partial [Clermontia micrantha]
gi|427338353|gb|AFY52175.1| chlorophyll binding protein, partial [Clermontia micrantha]
gi|427338355|gb|AFY52176.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338357|gb|AFY52177.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338359|gb|AFY52178.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338361|gb|AFY52179.1| chlorophyll binding protein, partial [Clermontia tuberculata]
gi|427338363|gb|AFY52180.1| chlorophyll binding protein, partial [Clermontia tuberculata]
gi|427338365|gb|AFY52181.1| chlorophyll binding protein, partial [Clermontia tuberculata]
gi|427338367|gb|AFY52182.1| chlorophyll binding protein, partial [Clermontia tuberculata]
gi|427338369|gb|AFY52183.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338371|gb|AFY52184.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338373|gb|AFY52185.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338375|gb|AFY52186.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338383|gb|AFY52190.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338385|gb|AFY52191.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338387|gb|AFY52192.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338389|gb|AFY52193.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338391|gb|AFY52194.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338393|gb|AFY52195.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338395|gb|AFY52196.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338397|gb|AFY52197.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338399|gb|AFY52198.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338401|gb|AFY52199.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338403|gb|AFY52200.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338405|gb|AFY52201.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338407|gb|AFY52202.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338409|gb|AFY52203.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338411|gb|AFY52204.1| chlorophyll binding protein, partial [Clermontia calophylla]
gi|427338413|gb|AFY52205.1| chlorophyll binding protein, partial [Clermontia clermontioides
subsp. clermontioides]
gi|427338415|gb|AFY52206.1| chlorophyll binding protein, partial [Clermontia clermontioides
subsp. clermontioides]
gi|427338417|gb|AFY52207.1| chlorophyll binding protein, partial [Clermontia clermontioides
subsp. clermontioides]
gi|427338419|gb|AFY52208.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338421|gb|AFY52209.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338423|gb|AFY52210.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338425|gb|AFY52211.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338427|gb|AFY52212.1| chlorophyll binding protein, partial [Clermontia calophylla]
gi|427338429|gb|AFY52213.1| chlorophyll binding protein, partial [Clermontia calophylla]
gi|427338431|gb|AFY52214.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338433|gb|AFY52215.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338435|gb|AFY52216.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338437|gb|AFY52217.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338439|gb|AFY52218.1| chlorophyll binding protein, partial [Clermontia oblongifolia
subsp. oblongifolia]
gi|427338441|gb|AFY52219.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|427338443|gb|AFY52220.1| chlorophyll binding protein, partial [Clermontia peleana]
gi|427338445|gb|AFY52221.1| chlorophyll binding protein, partial [Clermontia singuliflora]
gi|427338447|gb|AFY52222.1| chlorophyll binding protein, partial [Clermontia singuliflora]
gi|427338449|gb|AFY52223.1| chlorophyll binding protein, partial [Clermontia singuliflora]
gi|427338451|gb|AFY52224.1| chlorophyll binding protein, partial [Clermontia singuliflora]
gi|427338453|gb|AFY52225.1| chlorophyll binding protein, partial [Clermontia drepanomorpha]
gi|427338455|gb|AFY52226.1| chlorophyll binding protein, partial [Clermontia lindseyana]
gi|428230858|gb|AFY99051.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|428230860|gb|AFY99052.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
Length = 197
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 110/202 (54%), Gaps = 35/202 (17%)
Query: 77 GWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV-- 128
G+D GLS DPE F + + L EV + R+AMLGA+G + PE+ + G+ E
Sbjct: 1 GFDPLGLS-DPEGTGGFIEPKWLAYGEVFNGRFAMLGAVGAIAPEIFGKLGLIPAETALP 59
Query: 129 WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG----GPLGEVT 184
WF+ G I G Y +P ++ ++ LMG E R+ G +G+
Sbjct: 60 WFQTGV-IPPAGSYTYWADP--------YTLFVFEMALMGFAEHRRLQDWYNPGSMGKQY 110
Query: 185 ------------DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 231
DP YPGG F +PLG D ++ ELK+KEIKNGRLAM ++ G+F+Q +
Sbjct: 111 FLGLEKGFAGSGDPAYPGGPFFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGL 170
Query: 232 VTGKGPLENLADHLADPVNNNA 253
VTG GP +NL DHLADPVNNN
Sbjct: 171 VTGVGPFQNLLDHLADPVNNNV 192
>gi|87313165|gb|ABD37879.1| light-harvesting chlorophyll-a/b binding protein Lhca2 [Mesostigma
viride]
Length = 242
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 126/270 (46%), Gaps = 52/270 (19%)
Query: 2 ATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSK---SVSSGSPWYGPDRVKYLG 58
+ S M +S+F+G V ++ R + K +K S SS P + P
Sbjct: 1 SVSQMIQASTFLGSKV---------ASVARATPAKAQAKFVVSASSNRPVWFPGNA---- 47
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
P ++L G PGD+G+D GLS+DP+ + E+ + RWAMLG G +
Sbjct: 48 -----PRAWLDGSLPGDFGYDPLGLSSDPQVLKWMVQAELQNARWAMLGVAGML------ 96
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG- 177
G V A Q + +DY + +++L + Q+VL VEG R A
Sbjct: 97 --GADLANKVGLPAAVQWYEAPLVDYQAD-----WKTLLVV---QLVLHAWVEGRRWADF 146
Query: 178 -GPLGEVTDPL-----------YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
P DP YPGG FDPLG + ELK+KEIKNGRLAM + G
Sbjct: 147 HSPGSANADPFGNSLPSTATTGYPGGPFDPLGFSKG--NLPELKLKEIKNGRLAMVASLG 204
Query: 226 FFVQAIVTGKGPLENLADHLADPVNNNAWA 255
FVQ TG PL+NLA HLADP + N +A
Sbjct: 205 LFVQYSATGASPLDNLAAHLADPGHANIFA 234
>gi|302829360|ref|XP_002946247.1| hypothetical protein VOLCADRAFT_108856 [Volvox carteri f.
nagariensis]
gi|300269062|gb|EFJ53242.1| hypothetical protein VOLCADRAFT_108856 [Volvox carteri f.
nagariensis]
Length = 256
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP++L GE PGD+G+D GL A+P++ RE E++H RWAM G + E++ +
Sbjct: 37 PPAHLKGELPGDFGFDPLGLGANPDSLKWFRESELVHSRWAMAAVAGILVQEIVRPD--- 93
Query: 124 FGEAVWFKAGAQIFSE-GGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 182
W+ AG+Q+ S G L L L W + G+V+ I
Sbjct: 94 ---VFWYSAGSQVESPLGPLGLLAFEFFCMHWVELRRWQ-DLRKPGSVDQDPIFSQYKLP 149
Query: 183 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 242
+P YPGG F P D AELKVKEIKNGRLAM + GF + A VTGKGP+ L
Sbjct: 150 PHEPGYPGGVFAPFIPGD----LAELKVKEIKNGRLAMLAFVGFVMAAQVTGKGPIAALQ 205
Query: 243 DHLADPVNNNAWAYATNFVPGK 264
+HLADP ++ A VPG+
Sbjct: 206 EHLADPWGTTIFSKAA-VVPGQ 226
>gi|307103837|gb|EFN52094.1| hypothetical protein CHLNCDRAFT_32710 [Chlorella variabilis]
Length = 264
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 116/238 (48%), Gaps = 32/238 (13%)
Query: 29 GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 88
G R+ + T S +G+ +R + + P YL G GDYG+D GL A+PE
Sbjct: 12 GTRVVAKSTSRSSARAGNVVVRAERSLWAPGVAS--PKYLDGNLAGDYGFDPMGLGANPE 69
Query: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 148
R+ E+ + RWAMLG G + E++ E W+ AG E + GN
Sbjct: 70 RLTWYRQAELQNARWAMLGVAGILGQEIINP------EQWWYSAG---MPENLPSFDGNK 120
Query: 149 SLIHAQSILAIWACQVVLMGAVEGYR---------IAGGPLG---EVTDPL--YPGGSFD 194
++ I A + +LM VE R + P +V +P YPGG FD
Sbjct: 121 V-----NMGGILAWEFLLMHFVEVRRWQDIRKKDSVNADPFNPNLKVPNPEMGYPGGPFD 175
Query: 195 PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
PLG + F E++ KEIKNGRLAM + F +QA TGKGPL NL DHLA P +NN
Sbjct: 176 PLGFSKG--NFKEVQTKEIKNGRLAMVAFVAFTIQAQATGKGPLANLTDHLASPFSNN 231
>gi|308813724|ref|XP_003084168.1| PSI-associated light-harvesting chlorophyll a/b binding protein,
(IC) [Ostreococcus tauri]
gi|63029295|gb|AAY27546.1| chloroplast light-harvesting complex I protein precursor Lhca3
[Ostreococcus tauri]
gi|116056051|emb|CAL58584.1| PSI-associated light-harvesting chlorophyll a/b binding protein,
(IC) [Ostreococcus tauri]
Length = 272
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 111/203 (54%), Gaps = 20/203 (9%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
SYL G PGDYG+D GLS DPE F + L E+IH RWAMLG G V PE+L
Sbjct: 60 SYLDGSLPGDYGFDPLGLS-DPEGAGGFVNPKWLAYSELIHGRWAMLGVAGMVAPEVLGG 118
Query: 120 NGVKFGEA--VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLM------GAVE 171
G+ E VWFKAG I ++G DY +P I + + ++ G++
Sbjct: 119 MGIIPQETGLVWFKAG-MIPAQGTYDYWASPFTIFWINAFLMNIAELRRAQDYWNPGSMG 177
Query: 172 GYRIAG--GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 229
AG LG DP YPGG F+ + + + A +K KEIKNGRLAM + FG Q
Sbjct: 178 KQDFAGLEKMLGGSGDPAYPGGFFNFMKQGE--KDMAAMKTKEIKNGRLAMMACFGCGAQ 235
Query: 230 AIVTGKGPLENLADHLADPVNNN 252
A +TG+GP++NL DH+ DP +N
Sbjct: 236 ACMTGEGPVKNLVDHVIDPFGHN 258
>gi|427338377|gb|AFY52187.1| chlorophyll binding protein, partial [Clermontia fauriei]
gi|427338379|gb|AFY52188.1| chlorophyll binding protein, partial [Clermontia fauriei]
gi|427338381|gb|AFY52189.1| chlorophyll binding protein, partial [Clermontia fauriei]
gi|428230862|gb|AFY99053.1| chlorophyll binding protein, partial [Clermontia fauriei]
Length = 197
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 109/202 (53%), Gaps = 35/202 (17%)
Query: 77 GWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV-- 128
G+D GLS DPE F + + L EV + R+AMLGA+G + PE+ + G+ E
Sbjct: 1 GFDPLGLS-DPEGTGGFIEPKWLAYGEVFNGRFAMLGAVGAIAPEIFGKLGLIPAETALP 59
Query: 129 WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG----GPLGEVT 184
WF+ G I G Y +P ++ ++ LMG E R+ G +G+
Sbjct: 60 WFQTGV-IPPAGSYTYWADP--------YTLFVFEMALMGFAEHRRLQDWYNPGSMGKQY 110
Query: 185 ------------DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 231
DP YPGG F +PLG D + ELK+KEIKNGRLAM ++ G+F+Q +
Sbjct: 111 FLGLEKGFAGSGDPAYPGGPFFNPLGFGKDETSMKELKLKEIKNGRLAMLAILGYFIQGL 170
Query: 232 VTGKGPLENLADHLADPVNNNA 253
VTG GP +NL DHLADPVNNN
Sbjct: 171 VTGVGPFQNLLDHLADPVNNNV 192
>gi|326510901|dbj|BAJ91798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 111/213 (52%), Gaps = 36/213 (16%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAR 119
+YL G PGD+G++ GLS DPE F + R L E+ + R AM+G +G + PE L +
Sbjct: 59 TYLDGTLPGDFGFNPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEALGK 117
Query: 120 NGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 177
G+ E WF+AGA I G Y +P ++ ++ L+G E R+
Sbjct: 118 VGLVPPETAIPWFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQD 168
Query: 178 ----------------GPLGEVTDPLYPGGS-FDPLGLADDPEA-FAELKVKEIKNGRLA 219
LG DP YPGG F+PLG E ELK+KEIKNGRLA
Sbjct: 169 WYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTKSEKEMKELKLKEIKNGRLA 228
Query: 220 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
M + G +QAI TG GP +NL DHL+DPVNNN
Sbjct: 229 MLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 261
>gi|145079606|tpg|DAA05920.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca4 [Mesostigma viride]
Length = 238
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 120/249 (48%), Gaps = 43/249 (17%)
Query: 23 GNELSNGGRISMRKTGSK---SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 79
G+++++ R + K +K S SS P + P P ++L G PGD+G+D
Sbjct: 9 GSKVASVARATPAKAQAKFVVSASSNRPVWFPGNA---------PRAWLDGSLPGDFGYD 59
Query: 80 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 139
GLS+DP+ + E+ + RWAMLG G + G V A Q +
Sbjct: 60 PLGLSSDPQVLKWMVQAELQNARWAMLGVAGML--------GADLANKVGLPAAVQWYEA 111
Query: 140 GGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPL---------- 187
+DY + +++L + Q+VL VEG R A P DP
Sbjct: 112 PLVDYQAD-----WKTLLVV---QLVLHAWVEGRRWADFHSPGSANADPFGNSLPSTATT 163
Query: 188 -YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 246
YPGG FDPLG + ELK+KEIKNGRLAM + G FVQ TG PL+NLA HLA
Sbjct: 164 GYPGGPFDPLGFSKG--NLPELKLKEIKNGRLAMVASLGLFVQYSATGASPLDNLAAHLA 221
Query: 247 DPVNNNAWA 255
DP + N +A
Sbjct: 222 DPGHANIFA 230
>gi|255074955|ref|XP_002501152.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas sp. RCC299]
gi|226516415|gb|ACO62410.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas sp. RCC299]
Length = 293
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 115/221 (52%), Gaps = 35/221 (15%)
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGAL 109
Y+ S + +YL G PGD+G+D G+S DPE F + L EVIH RWAMLG
Sbjct: 70 YMMGVSDQNMAYLDGTLPGDFGFDPLGMS-DPEGAGGFVNPQWLAYSEVIHGRWAMLGVA 128
Query: 110 GCVFPELLARNGV--KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI-------- 159
G V PE+L GV + VWF +GA I +G DY NP I ++ +
Sbjct: 129 GIVAPEILGGMGVIPESTGLVWFTSGA-IPPQGTFDYWANPMTIFWVNMCMMNFAEIKRG 187
Query: 160 ---W----ACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVK 211
W + L+G +G+ +G +P YPGG F+P L D A ++ K
Sbjct: 188 QDYWFPGSQAETPLLGWEKGFGGSG-------NPTYPGGKWFNPFNLGKDD--MASMQKK 238
Query: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
E+KNGRLAM + G VQA VTG+GP +N+ DH+ADP N
Sbjct: 239 EVKNGRLAMMAFLGCMVQAAVTGEGPWKNICDHVADPFGAN 279
>gi|157965827|gb|ABW06950.1| chloroplast light-harvesting complex I protein precursor [Euglena
gracilis]
Length = 610
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 103/193 (53%), Gaps = 37/193 (19%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP+YLTGEFP D G+D AGL+ADP+ + + R EV + R AML +GCV+PELL
Sbjct: 258 PPAYLTGEFPADRGFDPAGLAADPKVYERMRIAEVFNGRLAMLAIVGCVYPELL------ 311
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG-- 181
G VWF+ ++ D+ A+ + QVV +E +R GG G
Sbjct: 312 -GNGVWFEVWNKV------DFYR----------FALISLQVV--APLEYWRGNGG-FGWD 351
Query: 182 --EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
E D YPG FDP L + K EIKNGRLAM MFG VQ+ VT +GP+
Sbjct: 352 GEEKYDRSYPG--FDPCNLTTE-----YTKAAEIKNGRLAMIGMFGLEVQSHVTAQGPVA 404
Query: 240 NLADHLADPVNNN 252
NL +HL P+ N
Sbjct: 405 NLMEHLRHPLAAN 417
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 94/191 (49%), Gaps = 34/191 (17%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP++LTGE+P D G+D L+ADP +A+ R EV H R +ML +G + PE+L
Sbjct: 75 PPAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLSMLAIVGAIVPEVL------ 128
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE- 182
G+ WF+AG + + + + + E +R GG +
Sbjct: 129 -GKGAWFEAGNSVDG------------------IKLGFIAMAIAAPTEYWRGNGGFNWDK 169
Query: 183 -VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
D YPG FDPL L D K EIKNGRLAM + G Q + TG+ PL NL
Sbjct: 170 GAADRSYPG--FDPLKLTTD-----YTKAAEIKNGRLAMAGLLGLTFQYLATGESPLANL 222
Query: 242 ADHLADPVNNN 252
A HLA+PV N
Sbjct: 223 AAHLANPVGTN 233
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 94/191 (49%), Gaps = 34/191 (17%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP++LTGE+P D G+D L+ADP +A+ R EV H R +ML +G + PE+L
Sbjct: 446 PPAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLSMLAIVGAIVPEVL------ 499
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE- 182
G+ WF+AG + + + + + E +R GG +
Sbjct: 500 -GKGAWFEAGNSVDG------------------IKLGFIAMAIAAPTEYWRGNGGFNWDK 540
Query: 183 -VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
D YPG FDPL L D K EIKNGRLAM + G Q + TG+ PL NL
Sbjct: 541 GAADRSYPG--FDPLKLTTD-----YTKAAEIKNGRLAMAGLLGLTFQYLATGESPLANL 593
Query: 242 ADHLADPVNNN 252
A HLA+PV N
Sbjct: 594 AAHLANPVGAN 604
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 209 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
K EIKNGRLA+ +M G VQ VTG PL NL +H+ P+ +N
Sbjct: 2 KEAEIKNGRLALTAMLGLEVQRHVTGVSPLVNLVEHVKHPLGHN 45
>gi|308801082|ref|XP_003075322.1| PSI-associated light-harvesting chlorophyll a/b binding protein
(IC) [Ostreococcus tauri]
gi|63029299|gb|AAY27548.1| chloroplast light-harvesting complex I protein precursor Lhca1
[Ostreococcus tauri]
gi|116061876|emb|CAL52594.1| PSI-associated light-harvesting chlorophyll a/b binding protein
(IC) [Ostreococcus tauri]
Length = 225
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 104/192 (54%), Gaps = 18/192 (9%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
E P++L G+ P DYG+D L P+ A+ RE E++H RWAM+G G V E+
Sbjct: 39 EAPAHLRGDLPCDYGFDPLNLGEKPDNLARYREAELMHARWAMMGVAGAVGVEIA----- 93
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 182
G+ W A + + YLGN + HA + A+ VL+ E R A GE
Sbjct: 94 --GQGDWASAQPTTW-DATAKYLGNET--HA-PLFAVIGVNGVLVAFAESQRQAA--TGE 145
Query: 183 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV--QAIVTGKGPLEN 240
LYPGGSFDP GL+ + F LK KE+ NGR+AM + FG QA +G GP++
Sbjct: 146 AR--LYPGGSFDPAGLSKGKD-FETLKRKELANGRVAMMAFFGIMAQHQADPSGPGPVKQ 202
Query: 241 LADHLADPVNNN 252
LA+HLADP + N
Sbjct: 203 LANHLADPWHVN 214
>gi|428230866|gb|AFY99055.1| chlorophyll binding protein, partial [Lobelia erinus]
Length = 197
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 110/202 (54%), Gaps = 35/202 (17%)
Query: 77 GWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV-- 128
G+D GLS DPE F + + L EVI+ R+AMLGA G + PE+ + G+ E
Sbjct: 1 GFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIFGKLGLIPAETALP 59
Query: 129 WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG----GPLGEVT 184
WF+ G I G Y +P ++ ++ LMG E R+ G +G+
Sbjct: 60 WFQTGV-IPPAGSYTYWADP--------YTLFVFEMALMGFAEHRRLQDWYNPGSMGKQY 110
Query: 185 ------------DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 231
DP YPGG F +PLG D ++ ELK+KEIKNGRLAM ++ G+F+Q +
Sbjct: 111 FLGLEKGFAGSGDPAYPGGPFFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGL 170
Query: 232 VTGKGPLENLADHLADPVNNNA 253
VTG GP +NL DHLADPV+NN
Sbjct: 171 VTGVGPFQNLLDHLADPVSNNV 192
>gi|297733963|emb|CBI15210.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 101/191 (52%), Gaps = 14/191 (7%)
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
PSYL G PGD G+D GL+ DPE + E+++ RWAMLG G + PE+ + G+
Sbjct: 60 PSYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVAGMLLPEVFTKIGI-I 118
Query: 125 GEAVWFKAG-AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG---YRIAGGPL 180
W+ AG A+ F+ ++ L H I W + G+V ++ P
Sbjct: 119 NAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKNYSLPP 176
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
EV YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP +N
Sbjct: 177 NEVG---YPGGIFNPLNFAPTEEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFDN 229
Query: 241 LADHLADPVNN 251
L H++DP +N
Sbjct: 230 LLQHISDPWHN 240
>gi|30692874|ref|NP_190331.3| chlorophyll a-b binding protein 4 [Arabidopsis thaliana]
gi|115385|sp|P27521.1|CA4_ARATH RecName: Full=Chlorophyll a-b binding protein 4, chloroplastic;
AltName: Full=LHCI type III CAB-4; Flags: Precursor
gi|166646|gb|AAA32760.1| light-harvesting chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|6522530|emb|CAB61973.1| CHLOROPHYLL A-B BINDING PROTEIN 4 PRECURSOR homolog [Arabidopsis
thaliana]
gi|20260362|gb|AAM13079.1| chlorophyll A-B binding protein 4 precursor homolog [Arabidopsis
thaliana]
gi|21554365|gb|AAM63472.1| chlorophyll a-b binding protein 4 precursor homolog [Arabidopsis
thaliana]
gi|23197770|gb|AAN15412.1| chlorophyll A-B binding protein 4 precursor homolog [Arabidopsis
thaliana]
gi|332644764|gb|AEE78285.1| chlorophyll a-b binding protein 4 [Arabidopsis thaliana]
Length = 251
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 100/191 (52%), Gaps = 14/191 (7%)
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
P YLTG GD G+D GL+ DPE + E+++ RWAMLG G + PE+ + G+
Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI-I 122
Query: 125 GEAVWFKAGA-QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG---YRIAGGPL 180
W+ AG Q F+ ++ L H I W + G+V ++ P
Sbjct: 123 NVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPK 180
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
GEV YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP EN
Sbjct: 181 GEVG---YPGGIFNPLNFAPTQEA----KEKELANGRLAMLAFLGFVVQHNVTGKGPFEN 233
Query: 241 LADHLADPVNN 251
L HL+DP +N
Sbjct: 234 LLQHLSDPWHN 244
>gi|11066109|gb|AAG28464.1|AF195794_1 chlorophyll A-B binding protein of LHCI [Chlamydomonas reinhardtii]
Length = 239
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 114/243 (46%), Gaps = 30/243 (12%)
Query: 6 MALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPP 65
MALS + A AP G +G R++ GS+ W P S + P
Sbjct: 1 MALSMRTL-SARTAAPRG---FSGRRVAAVSNGSRVTMKAGNWL---------PGS-DAP 46
Query: 66 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 125
++L + PG+YG+D L +P + + E EVIH RWAMLG G + ELL G
Sbjct: 47 AWLPDDLPGNYGFDPLSLGKEPASLKRFTESEVIHGRWAMLGVAGSLAVELL-------G 99
Query: 126 EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTD 185
W+ A + G + G ++LA + V M A EG R
Sbjct: 100 YGNWYDAPLWAVNGGKATWFGIEVPFDLNALLAF---EFVAMAAAEGQRRR------CRR 150
Query: 186 PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 245
PGG+FDPLG A D ELK+KEIKNGRLAM + GF Q TGK PL L +HL
Sbjct: 151 RRLPGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGFVAQHAATGKAPLAALGEHL 210
Query: 246 ADP 248
A+P
Sbjct: 211 ANP 213
>gi|384253050|gb|EIE26525.1| light-harvesting chlorophyll-a/b protein of photosystem I
[Coccomyxa subellipsoidea C-169]
Length = 272
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 113/217 (52%), Gaps = 34/217 (15%)
Query: 62 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 121
G+ P++L G PGD+G+D GL ADPE A E E +H RWAML G E++ +
Sbjct: 46 GDAPAHLDGSLPGDFGFDPLGLGADPERLAWFAESERVHARWAMLAVAGIAVQEVVRPD- 104
Query: 122 VKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GP 179
W++A + + + +P+ +IL + A ++ M VE R P
Sbjct: 105 -----VFWYEAALK----SPMPFGNSPA-----AILGLVAFELFAMHFVEVRRAYDFKNP 150
Query: 180 LGEVTDPL------------YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 227
+ DP+ YPGG F P+ D AELK+KEIKNGRLAM + GF
Sbjct: 151 GSQDQDPIFSNNKLPKHEVGYPGGIFAPVIPGD----LAELKLKEIKNGRLAMLAFAGFV 206
Query: 228 VQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
+QA VTGKGPL +L DHL++P+ ++ A +PG+
Sbjct: 207 MQAQVTGKGPLASLGDHLSNPIGTTIFSKAV-VIPGQ 242
>gi|159474444|ref|XP_001695335.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
gi|158275818|gb|EDP01593.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
Length = 239
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 92/176 (52%), Gaps = 16/176 (9%)
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 122
+ P++L + PG+YG+D L +P + + E EVIH RWAMLG G + ELL
Sbjct: 44 DAPAWLPDDLPGNYGFDPLSLGKEPASLKRFTESEVIHGRWAMLGVAGSLAVELL----- 98
Query: 123 KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 182
G W+ A + G + G ++LA + V M A EG R G+
Sbjct: 99 --GYGNWYDAPLWAVNGGKATWFGIEVPFDLNALLAF---EFVAMAAAEGQR------GD 147
Query: 183 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
+YPGG+FDPLG A D ELK+KEIKNGRLAM + GF Q TGKGP+
Sbjct: 148 AGGVVYPGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGFVAQHAATGKGPI 203
>gi|225457389|ref|XP_002284856.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
vinifera]
gi|147843386|emb|CAN79984.1| hypothetical protein VITISV_038035 [Vitis vinifera]
Length = 252
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 101/191 (52%), Gaps = 14/191 (7%)
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
PSYL G PGD G+D GL+ DPE + E+++ RWAMLG G + PE+ + G+
Sbjct: 63 PSYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVAGMLLPEVFTKIGI-I 121
Query: 125 GEAVWFKAG-AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG---YRIAGGPL 180
W+ AG A+ F+ ++ L H I W + G+V ++ P
Sbjct: 122 NAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKNYSLPP 179
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
EV YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP +N
Sbjct: 180 NEVG---YPGGIFNPLNFAPTEEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFDN 232
Query: 241 LADHLADPVNN 251
L H++DP +N
Sbjct: 233 LLQHISDPWHN 243
>gi|297819360|ref|XP_002877563.1| chlorophyll a/b-binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297323401|gb|EFH53822.1| chlorophyll a/b-binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 252
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 100/192 (52%), Gaps = 14/192 (7%)
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
P YLTG GD G+D GL+ DPE + E+++ RWAMLG G + PE+ + G+
Sbjct: 65 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKLGI-I 123
Query: 125 GEAVWFKAGA-QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG---YRIAGGPL 180
W+ AG Q F+ ++ L H I W + G+V ++ P
Sbjct: 124 NVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPK 181
Query: 181 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
GEV YPGG F+PL A EA K KEI NGRLAM + GF VQ VTGKGP EN
Sbjct: 182 GEVG---YPGGIFNPLNFAPTLEA----KEKEIANGRLAMLAFLGFVVQHNVTGKGPFEN 234
Query: 241 LADHLADPVNNN 252
L HL+DP +N
Sbjct: 235 LLQHLSDPWHNT 246
>gi|157965823|gb|ABW06948.1| chloroplast light-harvesting complex I protein precursor [Euglena
gracilis]
Length = 582
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 103/193 (53%), Gaps = 37/193 (19%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP+YLTGEFP D G+D AGL+ADP+ + + R EV + R AML +GCV+PELL
Sbjct: 228 PPAYLTGEFPADRGFDPAGLAADPKVYERMRIAEVFNGRLAMLAIVGCVYPELL------ 281
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG-- 181
G VWF+ ++ D+ A+ + QVV +E +R GG G
Sbjct: 282 -GNGVWFEVWNKV------DFYR----------FALISLQVV--APLEYWRGNGG-FGWD 321
Query: 182 --EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
E D YPG FDP L + K EIKNGRLAM MFG VQ+ VT +GP+
Sbjct: 322 GEEKYDRSYPG--FDPCNLTTE-----YTKAAEIKNGRLAMIGMFGLEVQSHVTAQGPVA 374
Query: 240 NLADHLADPVNNN 252
NL +HL P+ N
Sbjct: 375 NLIEHLRHPLAAN 387
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 94/191 (49%), Gaps = 34/191 (17%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP++LTGE+P D G+D L+ADP +A+ R EV H R +ML +G + PE+L
Sbjct: 45 PPAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLSMLAIVGAIVPEVL------ 98
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE- 182
G+ WF+AG + + + + + E +R GG +
Sbjct: 99 -GKGAWFEAGNSV------------------DGIKLGFIAMAIAAPTEYWRGNGGFNWDK 139
Query: 183 -VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
D YPG FDPL L D K EIKNGRLAM + G Q + TG+ PL NL
Sbjct: 140 GAADRSYPG--FDPLKLTTD-----YTKAAEIKNGRLAMAGLLGLTFQYLATGESPLANL 192
Query: 242 ADHLADPVNNN 252
A HLA+PV N
Sbjct: 193 AAHLANPVGAN 203
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 93/191 (48%), Gaps = 34/191 (17%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP++LTGE+P D G+D L+ADP +A+ R EV H R ML +G + PE+L
Sbjct: 418 PPAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLCMLAIVGAIVPEVL------ 471
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE- 182
G+ WF+AG + + + + + E +R GG +
Sbjct: 472 -GKGAWFEAGNSV------------------DGIKLGFIAMAIAAPTEYWRGNGGFNWDK 512
Query: 183 -VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
D YPG FDPL L D K EIKNGRLAM + G Q + TG+ PL NL
Sbjct: 513 GAADRSYPG--FDPLKLTTD-----YTKAAEIKNGRLAMAGLLGLTFQYLATGESPLANL 565
Query: 242 ADHLADPVNNN 252
A HLA+PV N
Sbjct: 566 AAHLANPVGAN 576
>gi|255639053|gb|ACU19827.1| unknown [Glycine max]
Length = 290
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 137/306 (44%), Gaps = 79/306 (25%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMR-------KTGSKSVSSGSPWYGPDR 53
MAT+T A +SSF+G + A SG GR+ R K S GS G D
Sbjct: 1 MATATAAATSSFMGTRLLEAHSG-----AGRVHARFGFGKKKAPAQKKASRGS---GRDT 52
Query: 54 VKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN--------- 93
V+ L + P YL G GDYG+D GL E AKN
Sbjct: 53 VRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDIIGTR 112
Query: 94 -----------------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 130
RE E+IH RWAML LG + E L GV W
Sbjct: 113 TELADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWL--TGV-----TWQ 165
Query: 131 KAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP---L 187
AG EG YLG P ++ IW + +++G +E R A DP L
Sbjct: 166 DAGKVELVEGS-SYLGQPLPFSITTL--IW-IEALVIGYIEFQRNAE------LDPEKRL 215
Query: 188 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 246
YPGGS FDPLGLA DPE A L++ EIK+ RLAM GF VQA VTGKGPL N A HL+
Sbjct: 216 YPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVGFLGFAVQAAVTGKGPLNNWATHLS 275
Query: 247 DPVNNN 252
DP++
Sbjct: 276 DPLHTT 281
>gi|302831910|ref|XP_002947520.1| light harvesting complex A [Volvox carteri f. nagariensis]
gi|300267384|gb|EFJ51568.1| light harvesting complex A [Volvox carteri f. nagariensis]
Length = 264
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
P YL G PGD+G+D L A+P + E++H R+AML G + PELL G
Sbjct: 68 PGYLDGTLPGDFGFDPLYLGAEPSKLKWYAQAELVHARFAMLAVAGILVPELLTNIGFS- 126
Query: 125 GEAVWFKAGAQIFSEGGLDYLG-NPSLIHAQSILAIWA-----CQVVLMGAVEGYRI-AG 177
W AG + G Y SL Q +L WA V G+ I +
Sbjct: 127 ----WPGAGVAWYDAGKFQYFAPASSLFGVQMLLFAWAELRRYQDFVKPGSANQDPIFSN 182
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
L + +P YPGG FDP G + LK KEIKNGRLAM + GF QA TG P
Sbjct: 183 NKLPDGNEPGYPGGIFDPFGWSKG--DMKSLKTKEIKNGRLAMLAFAGFAAQAYTTGTTP 240
Query: 238 LENLADHLADPVNNNAW 254
L+NLA HLADP W
Sbjct: 241 LKNLATHLADPWATTVW 257
>gi|4689382|gb|AAD27878.1|AF139466_1 chlorophyll a/b binding protein CP29 [Vigna radiata]
Length = 290
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 130/297 (43%), Gaps = 81/297 (27%)
Query: 10 SSFVGKAVNLAPSGNELSNGGRISMR-------KTGSKSVSSGSPWYGPDRVKYLGPFSG 62
SSF+G + A SG+ GRI R K K VS G P + L
Sbjct: 12 SSFMGTRLLDAHSGS-----GRIQARFGFGSKKKAAPKKVSKG-----PSTDRPLWYPGA 61
Query: 63 EPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------------------ 93
+ P +L G GDYG+D GL E AKN
Sbjct: 62 KAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNEAGIIIGTRTEVADVKST 121
Query: 94 --------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 139
RE E+IH RWAML LG + E L GV W AG E
Sbjct: 122 PFQPYSEVFGLQRFRECELIHGRWAMLATLGALSVEWL--TGV-----TWQDAGKVELVE 174
Query: 140 GGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP---LYPGGS-FDP 195
G YLG P ++ IW +V+++G +E R A DP LYPGGS FDP
Sbjct: 175 GS-SYLGQPLPFSITTL--IW-IEVLVIGYIEFQRNAE------LDPEKRLYPGGSYFDP 224
Query: 196 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
LGLA DPE A L++ EIK+ RLAM GF VQA TGKGPL N A HL+DP++
Sbjct: 225 LGLASDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTT 281
>gi|428230864|gb|AFY99054.1| chlorophyll binding protein, partial [Cyanea asplenifolia]
Length = 197
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 109/202 (53%), Gaps = 35/202 (17%)
Query: 77 GWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV-- 128
G+D GLS DPE F + + L EVI+ R+AMLGA G + PE+ + G+ E
Sbjct: 1 GFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIFGKLGLIPAETALP 59
Query: 129 WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG----GPLGEVT 184
WF+ G I G Y +P ++ ++ LMG E R G +G+
Sbjct: 60 WFQTGV-IPPAGSYTYWADP--------YTLFVFEMALMGFAEHRRFQDWYNPGSMGKQY 110
Query: 185 ------------DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 231
+P YPGG F +PLG D ++ ELK+KEIKNGRLAM ++ G+F+Q +
Sbjct: 111 FLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGL 170
Query: 232 VTGKGPLENLADHLADPVNNNA 253
VTG GP +NL DHLADPVNNN
Sbjct: 171 VTGVGPFQNLLDHLADPVNNNV 192
>gi|732534|gb|AAB40979.1| light harvesting complex a [Volvox carteri]
Length = 264
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
P YL G PGD+G+D L A+P + E++H R+AML G + PELL G
Sbjct: 68 PGYLDGTLPGDFGFDPLYLGAEPSKLKWYAQAELVHARFAMLAVAGILVPELLTNIGFS- 126
Query: 125 GEAVWFKAGAQIFSEGGLDYLG-NPSLIHAQSILAIWA-----CQVVLMGAVEGYRI-AG 177
W AG + G Y SL Q +L WA V G+ I +
Sbjct: 127 ----WPGAGVAWYDAGKFQYFAPASSLFGVQMLLFAWAELRRYQDFVKPGSANQDPIFSN 182
Query: 178 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
L + +P YPGG FDP G + LK KEIKNGRLAM + GF QA TG P
Sbjct: 183 NKLPDGNEPGYPGGIFDPFGWSKGD--MKSLKTKEIKNGRLAMLAFAGFAAQAYTTGTTP 240
Query: 238 LENLADHLADPVNNNAW 254
L+NLA HLADP W
Sbjct: 241 LKNLATHLADPWATTVW 257
>gi|77799148|gb|ABB03717.1| putative chloroplast chlorophyll A-B binding protein type I
[Sorghum bicolor]
Length = 61
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/55 (98%), Positives = 55/55 (100%)
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
VKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 7 VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 61
>gi|87313221|gb|ABD37907.1| light-harvesting chlorophyll-a/b binding protein Lhca5
[Chlamydomonas incerta]
Length = 257
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 105/214 (49%), Gaps = 39/214 (18%)
Query: 64 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123
PP++L GE PGD+G+D GL A+ E+ +E E++HCRWAM G + E++ +
Sbjct: 38 PPAHLKGELPGDFGFDPLGLGANAESLKWFKESELVHCRWAMAAVAGILVQEIVRPD--- 94
Query: 124 FGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLG 181
W+ AG ++ S G L + A + LM VE R P
Sbjct: 95 ---VFWYNAGKEVESPLG--------------PLGLLAVEFFLMHWVELRRWQDLRKPGS 137
Query: 182 EVTDPL------------YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 229
DP+ YPGG F P D AELKVKEIKNGRLAM + GF +
Sbjct: 138 VDQDPIFSQYKLPAHEVGYPGGVFAPFIPGD----LAELKVKEIKNGRLAMLAFVGFVMA 193
Query: 230 AIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263
A VTGKGP+ L +HLADP ++ A VPG
Sbjct: 194 AQVTGKGPIAALQEHLADPFGTTIFSKAA-VVPG 226
>gi|302848571|ref|XP_002955817.1| hypothetical protein VOLCADRAFT_106964 [Volvox carteri f.
nagariensis]
gi|300258785|gb|EFJ43018.1| hypothetical protein VOLCADRAFT_106964 [Volvox carteri f.
nagariensis]
Length = 257
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 99/202 (49%), Gaps = 31/202 (15%)
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124
P YL GE GDYGWD GL ADP R+ E++H RWAMLG G + E++ +
Sbjct: 42 PDYLKGELAGDYGWDPLGLGADPVALRWYRQSELVHARWAMLGVAGVLVQEVVKPD---- 97
Query: 125 GEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEV 183
F E GL P ++ + A + +LM VE R G V
Sbjct: 98 ----------VYFYEAGLPQ-NLPEPFTNVNMGGLLAWEFILMHWVEVRRWQDYKNFGSV 146
Query: 184 T-DPL------------YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
DP+ YPGG FDPLG + EL+ KEIKNGRLAM + GF +QA
Sbjct: 147 NEDPIFKGNKVPNPEMGYPGGIFDPLGFSKG--NLKELQTKEIKNGRLAMVAYMGFVLQA 204
Query: 231 IVTGKGPLENLADHLADPVNNN 252
TGKGPL L+ HL++P NN
Sbjct: 205 QATGKGPLAALSAHLSNPFGNN 226
>gi|159480944|ref|XP_001698542.1| regulatory chlorophyll a/b binding protein [Chlamydomonas
reinhardtii]
gi|158282282|gb|EDP08035.1| regulatory chlorophyll a/b binding protein [Chlamydomonas
reinhardtii]
Length = 237
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 107/220 (48%), Gaps = 44/220 (20%)
Query: 66 SYLTGEFPGDYGWDTAGLSADPET----FAKNREL---EVIHCRWAMLGALGCVFPELLA 118
SYL G PGD G+D GL DP F R L EV+H RWAMLGA GC+ PE LA
Sbjct: 19 SYLDGTLPGDMGFDPLGLF-DPTNGSAGFMSQRWLHTAEVVHGRWAMLGAAGCLAPEYLA 77
Query: 119 RNGV--KFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR-- 174
V K +WFK G G DY G P + A++ Q+ LMG VE R
Sbjct: 78 HEKVIPKATGLLWFKTGFLPPVSAGFDY-GLP-------VTALFLIQMGLMGTVESLRWA 129
Query: 175 -------IAGGPLGEVTDPL-------------YPGG-SFDPLGL-ADDPEAFAELKVKE 212
+A PL V PL YPGG F+PLGL A P E + E
Sbjct: 130 ELSNPGSLASNPL--VPQPLARLIGTTRLGGGAYPGGLMFNPLGLGATRPAVMREYQQSE 187
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
I++GRLAM + G+ QA+VTGKGP N HL DP N
Sbjct: 188 IRHGRLAMVACLGYAAQAVVTGKGPYTNWVAHLEDPDIEN 227
>gi|326508082|dbj|BAJ86784.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326526845|dbj|BAK00811.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 273
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 113/227 (49%), Gaps = 36/227 (15%)
Query: 50 GPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 108
GPDR + F G PP +L G PGD+G+D G ++PE+ + E++H RWAML
Sbjct: 65 GPDRPVW---FPGTAPPPWLDGSLPGDFGFDPLGFGSEPESLRWFAQAELMHGRWAMLAV 121
Query: 109 LGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG 168
G + PE+L + G E W+ AG + +Y +P ++ Q+ LMG
Sbjct: 122 AGILIPEILQKWGF-MEEFSWYTAGER-------EYFADP--------WTLFVTQMALMG 165
Query: 169 AVEGYRIAG--GPLGEVTDPLYPGGSFD------PLGLADD--------PEAFAELKVKE 212
VEG R P +P +P P GL D PE L+ KE
Sbjct: 166 WVEGRRWMDYLNPGSVDIEPRFPNRKNPTPDVGYPGGLWFDWGNWGRGSPEPVMVLRTKE 225
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 259
IKNGRLAM + GF+ Q + TG+GPL+NL HLADP + N ++ T+
Sbjct: 226 IKNGRLAMLAFVGFWFQVVYTGQGPLDNLFAHLADPGHCNIFSAFTS 272
>gi|346987811|gb|AEO51756.1| chloroplast chlorophyll A/B binding protein [Dimocarpus longan]
Length = 286
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 126/290 (43%), Gaps = 68/290 (23%)
Query: 10 SSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 69
SSF+G + + S GR+ R ++ + P + L + P YL
Sbjct: 11 SSFLGTRL----PADVYSKSGRVQARFGFRTKKAAPKKFSKPSADRPLWYPGAKAPEYLD 66
Query: 70 GEFPGDYGWDTAGLSADPE-----------TFAKN------------------------- 93
G GDYG+D GL E AKN
Sbjct: 67 GSLVGDYGFDPFGLGKPVEYLQYDLDSLDQNLAKNMAGDIIGTRVESSEVKSTPFQPYTE 126
Query: 94 -------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG 146
RE E+IH RWAML LG + E L GV W AG EG YLG
Sbjct: 127 VFGLQRFRECELIHGRWAMLATLGALSVEWL--TGV-----TWQDAGKVELVEGS-SYLG 178
Query: 147 NPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP---LYPGGSF-DPLGLADDP 202
P ++ IW +V+L+G +E R A DP LYPGG F DPLGLA DP
Sbjct: 179 QPLPFSISTL--IW-IEVLLIGYIEFQRNAE------LDPEKRLYPGGKFFDPLGLAADP 229
Query: 203 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
E A L++ EIK+ RLAM GF VQA VTGKGPL N A HL+DP++
Sbjct: 230 EKKATLQLAEIKHARLAMVGFLGFAVQAAVTGKGPLNNWATHLSDPLHTT 279
>gi|255574383|ref|XP_002528105.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223532494|gb|EEF34284.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 285
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 121/283 (42%), Gaps = 84/283 (29%)
Query: 27 SNGGRISMR----------KTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDY 76
SN GR+ R K +K S WY + P +L G GDY
Sbjct: 23 SNSGRVQARFGFGTKKSAPKRSAKPTSDRPLWYP----------GAKAPEWLDGSLVGDY 72
Query: 77 GWDTAGLSADPE-----------TFAKN-------------------------------- 93
G+D GL E AKN
Sbjct: 73 GFDPFGLGKPAEYLQFELDSLDQNLAKNIAGDIIGTRTEAADVKSTPFQPYSEVFGLQRF 132
Query: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
RE E+IH RWAML LG + E L GV W AG EG YLG P
Sbjct: 133 RECELIHGRWAMLATLGALTVEWL--TGV-----TWQDAGKVELVEGS-SYLGQPLPFSI 184
Query: 154 QSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP---LYPGGSF-DPLGLADDPEAFAELK 209
++ IW +V+++G +E R DP LYPGG F DPLGLA+DPE A L+
Sbjct: 185 TTL--IW-IEVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAEDPEKKATLQ 235
Query: 210 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
+ EIK+ RLAM + GF VQA VTGKGPL N A HL+DP++
Sbjct: 236 LAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTT 278
>gi|326523021|dbj|BAJ88556.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 113/227 (49%), Gaps = 36/227 (15%)
Query: 50 GPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 108
GPDR + F G PP +L G PGD+G+D G ++PE+ + E++H RWAML
Sbjct: 62 GPDRPVW---FPGTAPPPWLDGSLPGDFGFDPLGFGSEPESLRWFAQAELMHGRWAMLAV 118
Query: 109 LGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG 168
G + PE+L + G E W+ AG + +Y +P ++ Q+ LMG
Sbjct: 119 AGILIPEILQKWGF-MEEFSWYTAGER-------EYFADP--------WTLFVTQMALMG 162
Query: 169 AVEGYRIAG--GPLGEVTDPLYPGGSFD------PLGLADD--------PEAFAELKVKE 212
VEG R P +P +P P GL D PE L+ KE
Sbjct: 163 WVEGRRWMDYLNPGSVDIEPRFPNRKNPTPDVGYPGGLWFDWGNWGRGSPEPVMVLRTKE 222
Query: 213 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 259
IKNGRLAM + GF+ Q + TG+GPL+NL HLADP + N ++ T+
Sbjct: 223 IKNGRLAMLAFVGFWFQVVYTGQGPLDNLFAHLADPGHCNIFSAFTS 269
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,735,244,728
Number of Sequences: 23463169
Number of extensions: 216285411
Number of successful extensions: 430390
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1536
Number of HSP's successfully gapped in prelim test: 299
Number of HSP's that attempted gapping in prelim test: 424037
Number of HSP's gapped (non-prelim): 2627
length of query: 264
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 124
effective length of database: 9,074,351,707
effective search space: 1125219611668
effective search space used: 1125219611668
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)