Your job contains 1 sequence.
>024658
MRKCELCECPARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGP
KLGPTVSVCDACVAAARCGVNDDDKAVVRGGSQSERISGHDETDDDDDYEDEDDDDDDDE
DPDEEEEEEDDENQVVPWSGDDSQSPPQPPPPPVSSSCSSISEEDFSLKRMRDFGDLFSD
DEIGCSSRPVTNEEAAASMSSYRPLKQPRPTISDCDRDHGQSVSRSTAIISSLRGLQNQT
MTDQGDAAAAITGICRLSRDHQTR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024658
(264 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2131709 - symbol:BBX28 "B-box domain protein 2... 337 7.2e-36 2
TAIR|locus:2147274 - symbol:BBX29 "B-box domain protein 2... 327 1.6e-29 1
TAIR|locus:2092940 - symbol:BBX32 "B-box domain protein 3... 164 3.1e-12 1
TAIR|locus:2095562 - symbol:BBX31 "B-box domain protein 3... 150 9.4e-11 1
TAIR|locus:1009023318 - symbol:BBX30 "B-box domain protei... 148 1.5e-10 1
TAIR|locus:2129860 - symbol:BBX9 "B-box domain protein 9"... 141 5.7e-09 2
TAIR|locus:2199262 - symbol:BBX27 "B-box domain protein 2... 132 3.7e-08 2
TAIR|locus:2043288 - symbol:AT2G47890 species:3702 "Arabi... 135 5.1e-07 1
TAIR|locus:2088748 - symbol:BBX10 "B-box domain protein 1... 130 1.2e-06 2
TAIR|locus:2074587 - symbol:COL2 "CONSTANS-like 2" specie... 132 1.3e-06 1
TAIR|locus:2047246 - symbol:COL3 "CONSTANS-like 3" specie... 130 1.6e-06 1
TAIR|locus:2164718 - symbol:BBX8 "B-box domain protein 8"... 127 6.3e-06 1
TAIR|locus:2091082 - symbol:COL9 "CONSTANS-like 9" specie... 124 1.5e-05 1
UNIPROTKB|Q9FRZ6 - symbol:Q9FRZ6 "Hd1" species:4530 "Oryz... 121 1.5e-05 1
TAIR|locus:2198841 - symbol:STO "SALT TOLERANCE" species:... 108 1.6e-05 2
TAIR|locus:2050130 - symbol:BBX18 "B-box domain protein 1... 114 1.8e-05 1
UNIPROTKB|Q9FRZ7 - symbol:Hd1 "Hd1 protein" species:39946... 122 2.2e-05 1
UNIPROTKB|Q9FDX8 - symbol:HD1 "Zinc finger protein HD1" s... 121 3.8e-05 1
UNIPROTKB|Q9FE92 - symbol:Hd1 "Heading day 1" species:453... 121 4.0e-05 1
TAIR|locus:2051104 - symbol:BBX12 "B-box domain protein 1... 120 5.2e-05 1
TAIR|locus:2143206 - symbol:CO "CONSTANS" species:3702 "A... 119 6.0e-05 1
TAIR|locus:2061330 - symbol:STH "salt tolerance homologue... 115 6.9e-05 1
TAIR|locus:2010504 - symbol:BBX13 "B-box domain protein 1... 119 7.6e-05 1
TAIR|locus:2122759 - symbol:bbx23 "B-box domain protein 2... 108 8.0e-05 1
TAIR|locus:2005624 - symbol:BBX21 "B-box domain protein 2... 117 8.4e-05 1
TAIR|locus:2143221 - symbol:COL1 "CONSTANS-like 1" specie... 114 0.00022 1
TAIR|locus:2028421 - symbol:BBX17 "B-box domain protein 1... 112 0.00032 1
>TAIR|locus:2131709 [details] [associations]
symbol:BBX28 "B-box domain protein 28" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 Pfam:PF00643 SMART:SM00336 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161566 GO:GO:0008270 GO:GO:0003700
GO:GO:0005622 EMBL:AL030978 IPI:IPI00524555 PIR:T05755
RefSeq:NP_194461.1 UniGene:At.28344 EnsemblPlants:AT4G27310.1
GeneID:828839 KEGG:ath:AT4G27310 TAIR:At4g27310 eggNOG:NOG263097
HOGENOM:HOG000115162 InParanoid:O81834 OMA:SAFKSTV PhylomeDB:O81834
ProtClustDB:CLSN2916189 Genevestigator:O81834 Uniprot:O81834
Length = 223
Score = 337 (123.7 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 60/94 (63%), Positives = 69/94 (73%)
Query: 2 RKCELCECPARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGPK 61
+KC+LC ARMYCESDQASLCWDCD KVH ANFLVAKH RCLLC CQSLTPWKA+G +
Sbjct: 3 KKCDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATGLR 62
Query: 62 LGPTVSVCDACVAAARCGVNDDDKAVVRGGSQSE 95
LGPT SVC++CVA G ++ + Q E
Sbjct: 63 LGPTFSVCESCVALKNAGGGRGNRVLSENRGQEE 96
Score = 66 (28.3 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 21/72 (29%), Positives = 29/72 (40%)
Query: 133 NQVVPWSGDDXXXXXXXXXXXXXXXXXXISEEDFSLKRMRDFGDLF-SDDEIGCSSRPVT 191
NQVVPWS +++ R R+ DL SDDEIG SS +
Sbjct: 151 NQVVPWSAAAQVPPVMSSSSSDGGSGGSVTKRT----RARENSDLLCSDDEIGSSSAQGS 206
Query: 192 NEEAAASMSSYR 203
N S+++
Sbjct: 207 NYSRPLKRSAFK 218
Score = 46 (21.3 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 164 EDFSLKRMRDFGDLFSDDEIGCSSRPVTNEEAAASMSSYRPLKQPRPTISDCDRDHGQ-- 221
E + D + +SDDE +EEA + + Q P +S D G
Sbjct: 118 ESYDDDEEEDEDEEYSDDEDEDDDEDGDDEEAENQVVPWSAAAQVPPVMSSSSSDGGSGG 177
Query: 222 SVSRST 227
SV++ T
Sbjct: 178 SVTKRT 183
>TAIR|locus:2147274 [details] [associations]
symbol:BBX29 "B-box domain protein 29" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009409 "response to cold" evidence=IEP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR000315 SMART:SM00336
EMBL:CP002688 GO:GO:0009555 GO:GO:0009409 GO:GO:0008270
GO:GO:0003700 GO:GO:0005622 HOGENOM:HOG000115162
ProtClustDB:CLSN2916189 EMBL:BT012358 EMBL:AK221519 IPI:IPI00528573
RefSeq:NP_200258.2 UniGene:At.43303 STRING:Q6NLH4
EnsemblPlants:AT5G54470.1 GeneID:835535 KEGG:ath:AT5G54470
TAIR:At5g54470 eggNOG:NOG303512 InParanoid:Q6NLH4 OMA:CESCLAR
Genevestigator:Q6NLH4 Uniprot:Q6NLH4
Length = 215
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 63/100 (63%), Positives = 73/100 (73%)
Query: 2 RKCELCECPARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGPK 61
+KCELC ARMYCESDQASLCWDCD KVH ANFLVAKH+RCLLC CQS TPWKASG
Sbjct: 4 KKCELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASGLN 63
Query: 62 LGPTVSVCDACVAAARCGVNDDDKAVVRGGS--QSERISG 99
LGPTVS+C++C+A + N++ R + Q E I G
Sbjct: 64 LGPTVSICESCLARKK---NNNSSLAGRDQNLNQEEEIIG 100
>TAIR|locus:2092940 [details] [associations]
symbol:BBX32 "B-box domain protein 32" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009640 "photomorphogenesis" evidence=IMP] [GO:0009785 "blue
light signaling pathway" evidence=IMP] [GO:0010017 "red or far-red
light signaling pathway" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0009909 "regulation of
flower development" evidence=IMP] GO:GO:0005634 GO:GO:0005737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003700 EMBL:AP000604
GO:GO:0009640 GO:GO:0010200 GO:GO:0009909 EMBL:BT005244
EMBL:AK117844 IPI:IPI00537563 RefSeq:NP_188752.1 UniGene:At.38107
IntAct:Q9LJB7 EnsemblPlants:AT3G21150.1 GeneID:821667
KEGG:ath:AT3G21150 TAIR:At3g21150 eggNOG:NOG279642
HOGENOM:HOG000090878 InParanoid:Q9LJB7 OMA:IISAVEM PhylomeDB:Q9LJB7
ProtClustDB:CLSN2915650 Genevestigator:Q9LJB7 Uniprot:Q9LJB7
Length = 225
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 33/81 (40%), Positives = 45/81 (55%)
Query: 4 CELCECPARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGPKLG 63
CELC A ++C +D A LC CD K H +NFL A+H R ++C C+SLT SGP L
Sbjct: 5 CELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSGPLLP 64
Query: 64 --PTVSVCDACVAAARCGVND 82
P + C +++ C D
Sbjct: 65 WPPRTTCCSESSSSSCCSSLD 85
>TAIR|locus:2095562 [details] [associations]
symbol:BBX31 "B-box domain protein 31" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010224 "response to UV-B" evidence=IEP;RCA] [GO:0009744
"response to sucrose stimulus" evidence=RCA] InterPro:IPR000315
Pfam:PF00643 SMART:SM00336 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 GO:GO:0010224
EMBL:AB028622 EMBL:AY086564 EMBL:AB493627 IPI:IPI00531471
RefSeq:NP_188827.1 UniGene:At.37979 ProteinModelPortal:Q9LRM4
EnsemblPlants:AT3G21890.1 GeneID:821744 KEGG:ath:AT3G21890
TAIR:At3g21890 eggNOG:NOG259331 HOGENOM:HOG000090727
InParanoid:Q9LRM4 OMA:CEADSAF PhylomeDB:Q9LRM4
ProtClustDB:CLSN2685268 Genevestigator:Q9LRM4 Uniprot:Q9LRM4
Length = 121
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 3 KCELCECPARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLT 53
+CELC+ A ++CE+D A LC CD VH ANFL +H+R +LC CQ LT
Sbjct: 30 RCELCDGDASVFCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSCQKLT 80
>TAIR|locus:1009023318 [details] [associations]
symbol:BBX30 "B-box domain protein 30" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119
SMART:SM00336 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008270
GO:GO:0005622 EMBL:DQ487602 IPI:IPI00657516 RefSeq:NP_001031645.1
UniGene:At.63271 EnsemblPlants:AT4G15248.1 GeneID:3769879
KEGG:ath:AT4G15248 TAIR:At4g15248 OMA:ELCGENA PhylomeDB:Q1G3I2
Genevestigator:Q2V3I2 Uniprot:Q1G3I2
Length = 117
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 27/50 (54%), Positives = 33/50 (66%)
Query: 4 CELCECPARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLT 53
CELC A +YCE+D A LC CD VH ANFL +HLR ++C C+ LT
Sbjct: 32 CELCGENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRKLT 81
>TAIR|locus:2129860 [details] [associations]
symbol:BBX9 "B-box domain protein 9" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006863 "purine
nucleobase transport" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:Z97338 EMBL:AL161541 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 HOGENOM:HOG000116529 IPI:IPI00529586
PIR:F71416 RefSeq:NP_193260.2 UniGene:At.54335
EnsemblPlants:AT4G15250.1 GeneID:827191 KEGG:ath:AT4G15250
TAIR:At4g15250 eggNOG:NOG321931 InParanoid:O23379 OMA:YQDCGIS
PhylomeDB:O23379 ProtClustDB:CLSN2915042 Genevestigator:O23379
GermOnline:AT4G15250 Uniprot:O23379
Length = 330
Score = 141 (54.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 32/78 (41%), Positives = 41/78 (52%)
Query: 3 KCELCECP-ARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGPK 61
+C+ C A +YC+SD A LC +CD VH AN L +H R LLC C SL P
Sbjct: 4 RCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKC-SLQPTAVHC-- 60
Query: 62 LGPTVSVCDACV-AAARC 78
+ VS+C C A+ C
Sbjct: 61 MNENVSLCQGCQWTASNC 78
Score = 41 (19.5 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 180 DDEIGCSSRPVTNEEAAASMSSYRPLKQPRPTI 212
DD G S+ VT + SS+ P++ P +
Sbjct: 128 DDWNGSSTSVVTQTQNLKDYSSFFPMESNLPKV 160
Score = 39 (18.8 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 21/66 (31%), Positives = 27/66 (40%)
Query: 179 SDDEIGCSSRPVTN-EEAAASMSSYRPLKQPR---PTISDCDRDHGQSVSRSTAIISSLR 234
S+D IGCSS T E S + P PT+S G V + +S+L
Sbjct: 186 SNDIIGCSSLDNTKCYEYEDSFKEENNIGLPSLLLPTLS------GNVVPNMSLSMSNLT 239
Query: 235 GLQNQT 240
G N T
Sbjct: 240 GESNAT 245
>TAIR|locus:2199262 [details] [associations]
symbol:BBX27 "B-box domain protein 27" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 PROSITE:PS50119 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC016447 EMBL:AK117800 IPI:IPI00522806
PIR:C96705 RefSeq:NP_176986.1 UniGene:At.35557
ProteinModelPortal:Q9C9F4 EnsemblPlants:AT1G68190.1 GeneID:843148
KEGG:ath:AT1G68190 TAIR:At1g68190 eggNOG:NOG293044
HOGENOM:HOG000111890 InParanoid:Q9C9F4 OMA:CIADTAN PhylomeDB:Q9C9F4
ProtClustDB:CLSN2717503 Genevestigator:Q9C9F4 GermOnline:AT1G68190
Uniprot:Q9C9F4
Length = 356
Score = 132 (51.5 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 2 RKCELCEC-PARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQS 51
R CE C+ A +YC +D A+LC CD KVH AN L +HLR +LC C++
Sbjct: 12 RVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKN 62
Score = 48 (22.0 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 18/58 (31%), Positives = 24/58 (41%)
Query: 186 SSRPVTNEEAAASMSSYRPLKQPRP---TISDCDRDHGQSVSRSTAIISSLRGLQNQT 240
SS ++E S S P+ P+P TIS + S S +IS L N T
Sbjct: 278 SSLDKSHEMKTFSSSFNNPIFAPKPASSTISFSSSETDNPYSHSEEVISFCPSLSNNT 335
>TAIR|locus:2043288 [details] [associations]
symbol:AT2G47890 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009805 "coumarin biosynthetic process"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AC005309 EMBL:AC006072 EMBL:BT023413 IPI:IPI00543399
PIR:G84920 RefSeq:NP_182310.1 UniGene:At.12948 STRING:O82256
EnsemblPlants:AT2G47890.1 GeneID:819401 KEGG:ath:AT2G47890
TAIR:At2g47890 eggNOG:NOG271369 HOGENOM:HOG000240051
InParanoid:O82256 OMA:CSRHARA PhylomeDB:O82256
ProtClustDB:CLSN2683730 Genevestigator:O82256 Uniprot:O82256
Length = 332
Score = 135 (52.6 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 2 RKCELCECP-ARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVC 49
R C+ C+ A +YC++D A LC CD++VH AN L AKH R LLC C
Sbjct: 11 RLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSC 59
>TAIR|locus:2088748 [details] [associations]
symbol:BBX10 "B-box domain protein 10" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AP000739 HOGENOM:HOG000116529 EMBL:AB493626 IPI:IPI00533145
RefSeq:NP_188826.1 UniGene:At.53422 EnsemblPlants:AT3G21880.1
GeneID:821743 KEGG:ath:AT3G21880 TAIR:At3g21880 eggNOG:NOG290178
InParanoid:Q9LJ44 OMA:KKTRTFG PhylomeDB:Q9LJ44
ProtClustDB:CLSN2685267 Genevestigator:Q9LJ44 Uniprot:Q9LJ44
Length = 364
Score = 130 (50.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 31/71 (43%), Positives = 39/71 (54%)
Query: 3 KCELCECP-ARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGPK 61
KC+ C A +YC+SD A LC +CD VH AN L +H+R L+C C S P A+
Sbjct: 4 KCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFS-QP--AAIRC 60
Query: 62 LGPTVSVCDAC 72
L VS C C
Sbjct: 61 LDEKVSYCQGC 71
Score = 36 (17.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 180 DDEIGCSS 187
DD IGCSS
Sbjct: 195 DDIIGCSS 202
>TAIR|locus:2074587 [details] [associations]
symbol:COL2 "CONSTANS-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:AC021640
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677
EMBL:AC068900 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009658 GO:GO:0009909 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:L81120 EMBL:L81119 EMBL:AF370149
EMBL:AY059092 EMBL:AY088779 IPI:IPI00518847 RefSeq:NP_186887.1
UniGene:At.10373 IntAct:Q96502 STRING:Q96502
EnsemblPlants:AT3G02380.1 GeneID:821298 KEGG:ath:AT3G02380
TAIR:At3g02380 eggNOG:NOG281690 InParanoid:Q96502 OMA:RVCEACE
PhylomeDB:Q96502 Genevestigator:Q96502 GermOnline:AT3G02380
Uniprot:Q96502
Length = 347
Score = 132 (51.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/74 (39%), Positives = 40/74 (54%)
Query: 2 RKCELCECPA-RMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGP 60
R C+ C A +YCE+D A LC CD +VH AN + ++H R +C C+S P A+
Sbjct: 14 RACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCES-AP--AAFL 70
Query: 61 KLGPTVSVCDACVA 74
S+C AC A
Sbjct: 71 CKADAASLCTACDA 84
Score = 114 (45.2 bits), Expect = 0.00021, P = 0.00021
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 1 MRKCELCE-CPARMYCESDQASLCWDCDEKVHCANFLVAKHLRC----LLCHVCQSLTP 54
+R C+ CE PA C++D ASLC CD ++H AN L +H R L + C S+ P
Sbjct: 56 VRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMAP 114
>TAIR|locus:2047246 [details] [associations]
symbol:COL3 "CONSTANS-like 3" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010099 "regulation of
photomorphogenesis" evidence=IMP] [GO:0010161 "red light signaling
pathway" evidence=IMP] [GO:0009637 "response to blue light"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010155 "regulation of proton transport" evidence=RCA]
[GO:0010218 "response to far red light" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC006585 EMBL:AC007266 GO:GO:0010161
GO:GO:0010099 HOGENOM:HOG000238833 EMBL:AY058130 EMBL:AY140103
EMBL:BT002107 EMBL:AY085729 IPI:IPI00519735 PIR:E84640
RefSeq:NP_180052.1 UniGene:At.24362 ProteinModelPortal:Q9SK53
IntAct:Q9SK53 STRING:Q9SK53 EnsemblPlants:AT2G24790.1 GeneID:817016
KEGG:ath:AT2G24790 TAIR:At2g24790 eggNOG:NOG277018
InParanoid:Q9SK53 OMA:TDSREND PhylomeDB:Q9SK53
ProtClustDB:CLSN2912944 Genevestigator:Q9SK53 Uniprot:Q9SK53
Length = 294
Score = 130 (50.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 2 RKCELCECPAR-MYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQ 50
R C+ C+ A ++C +D A LC DCD K+H AN L ++H R LC VC+
Sbjct: 6 RLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCE 55
>TAIR|locus:2164718 [details] [associations]
symbol:BBX8 "B-box domain protein 8" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005886 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB023039 EMBL:AY039957 EMBL:AY142607
IPI:IPI00527282 RefSeq:NP_199636.1 UniGene:At.7080
ProteinModelPortal:Q9LUA9 IntAct:Q9LUA9 STRING:Q9LUA9
EnsemblPlants:AT5G48250.1 GeneID:834878 KEGG:ath:AT5G48250
TAIR:At5g48250 eggNOG:NOG248444 HOGENOM:HOG000116529
InParanoid:Q9LUA9 OMA:ESACEQG PhylomeDB:Q9LUA9
ProtClustDB:CLSN2684850 Genevestigator:Q9LUA9 GermOnline:AT5G48250
Uniprot:Q9LUA9
Length = 373
Score = 127 (49.8 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 31/79 (39%), Positives = 39/79 (49%)
Query: 4 CELC-ECPARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGPKL 62
C+ C E + +YC SD A LC CD VH AN L +H R L+C C + P AS
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNA-QP--ASVRCS 61
Query: 63 GPTVSVCDACVAAARCGVN 81
VS+C C + G N
Sbjct: 62 DERVSLCQNCDWSGHDGKN 80
>TAIR|locus:2091082 [details] [associations]
symbol:COL9 "CONSTANS-like 9" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017
SMART:SM00336 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0007623 GO:GO:0008270 GO:GO:0003700
EMBL:AC009176 eggNOG:NOG248444 HOGENOM:HOG000116529
ProtClustDB:CLSN2684850 EMBL:AY049290 IPI:IPI00522412
RefSeq:NP_001030659.1 RefSeq:NP_001118599.1 RefSeq:NP_187422.1
RefSeq:NP_974250.1 UniGene:At.18337 STRING:Q9SSE5 PRIDE:Q9SSE5
EnsemblPlants:AT3G07650.1 EnsemblPlants:AT3G07650.2
EnsemblPlants:AT3G07650.3 EnsemblPlants:AT3G07650.4 GeneID:819956
KEGG:ath:AT3G07650 TAIR:At3g07650 InParanoid:Q9SSE5 OMA:TSHIQTE
PhylomeDB:Q9SSE5 Genevestigator:Q9SSE5 GermOnline:AT3G07650
GO:GO:0048579 Uniprot:Q9SSE5
Length = 372
Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 4 CELC-ECPARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGPKL 62
C+ C E + +YC SD A LC CD VH AN L +H R L+C C + P A+ +
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNA-QP--ATVRCV 61
Query: 63 GPTVSVCDAC 72
VS+C C
Sbjct: 62 EERVSLCQNC 71
>UNIPROTKB|Q9FRZ6 [details] [associations]
symbol:Q9FRZ6 "Hd1" species:4530 "Oryza sativa" [GO:0003677
"DNA binding" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0010229 "inflorescence development" evidence=IGI]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] InterPro:IPR000315
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0010229 GO:GO:0048571
GO:GO:0048572 EMBL:AB041841 Gramene:Q9FRZ6 Genevestigator:Q9FRZ6
Uniprot:Q9FRZ6
Length = 259
Score = 121 (47.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/76 (32%), Positives = 36/76 (47%)
Query: 2 RKCELCEC-PARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGP 60
R C+ C P+ +YC +D A LC CD +VH AN + ++H R +C C+ A
Sbjct: 33 RPCDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEACERAPAALACRA 92
Query: 61 KLGPTVSVCDACVAAA 76
CD V +A
Sbjct: 93 DAAALCVACDVQVYSA 108
>TAIR|locus:2198841 [details] [associations]
symbol:STO "SALT TOLERANCE" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009416 "response to light stimulus"
evidence=IEP] [GO:0009640 "photomorphogenesis" evidence=IGI]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009651
"response to salt stress" evidence=IGI;RCA] [GO:0009737 "response
to abscisic acid stimulus" evidence=RCA] [GO:0046686 "response to
cadmium ion" evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0009651 GO:GO:0008270 GO:GO:0003700
GO:GO:0080167 GO:GO:0009640 EMBL:AC024174 HOGENOM:HOG000239240
ProtClustDB:CLSN2682276 EMBL:X95572 EMBL:AY079377 EMBL:AY045794
IPI:IPI00518701 PIR:E86195 RefSeq:NP_172094.1 UniGene:At.23289
UniGene:At.38035 UniGene:At.70752 ProteinModelPortal:Q96288
SMR:Q96288 IntAct:Q96288 MINT:MINT-189223 STRING:Q96288
EnsemblPlants:AT1G06040.1 GeneID:837113 KEGG:ath:AT1G06040
TAIR:At1g06040 eggNOG:NOG313367 InParanoid:Q96288 OMA:PRCDICQ
PhylomeDB:Q96288 Genevestigator:Q96288 Uniprot:Q96288
Length = 248
Score = 108 (43.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 3 KCELCE-CPARMYCESDQASLCWDCDEKVHCANFLVAKHLR 42
+C++CE PA + C +D+A+LC CD ++H AN L +KH R
Sbjct: 4 QCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQR 44
Score = 108 (43.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 3 KCELC-ECPARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLT 53
+C++C E A ++C D+A LC DCDE +H AN A H R L + +LT
Sbjct: 56 RCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALT 107
Score = 47 (21.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 15/71 (21%), Positives = 25/71 (35%)
Query: 136 VPWSGDDXXXXXXXXXXXXXXXXXXISEEDFSLKRMRDFGDLFSDDEIGCSSRPVTNEEA 195
+PW+ DD + E M FGD +D + + P +
Sbjct: 150 LPWAVDDFFHFSDIESTDKKGQLDLGAGELDWFSDMGFFGDQINDKALPAAEVPELSVSH 209
Query: 196 AASMSSYRPLK 206
+ SY+P+K
Sbjct: 210 LGHVHSYKPMK 220
>TAIR|locus:2050130 [details] [associations]
symbol:BBX18 "B-box domain protein 18" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010264 "myo-inositol hexakisphosphate biosynthetic process"
evidence=RCA] InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119
SMART:SM00336 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008270
EMBL:AC006841 GO:GO:0003700 GO:GO:0005622 HOGENOM:HOG000239240
EMBL:AY060570 EMBL:AY125573 IPI:IPI00525924 PIR:H84599
RefSeq:NP_565507.1 UniGene:At.27367 ProteinModelPortal:Q9SJU5
SMR:Q9SJU5 STRING:Q9SJU5 EnsemblPlants:AT2G21320.1 GeneID:816671
KEGG:ath:AT2G21320 TAIR:At2g21320 eggNOG:NOG329451
InParanoid:Q9SJU5 OMA:KCNKLAS PhylomeDB:Q9SJU5
ProtClustDB:CLSN2914972 ArrayExpress:Q9SJU5 Genevestigator:Q9SJU5
Uniprot:Q9SJU5
Length = 172
Score = 114 (45.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 4 CELCECPARM-YCESDQASLCWDCDEKVHCANFLVAKHLR 42
C+ CE A + +C +D+A+LC CDEKVH N L ++HLR
Sbjct: 5 CDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLR 44
>UNIPROTKB|Q9FRZ7 [details] [associations]
symbol:Hd1 "Hd1 protein" species:39946 "Oryza sativa Indica
Group" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0048571 "long-day
photoperiodism" evidence=IEP] [GO:0048572 "short-day
photoperiodism" evidence=IEP] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0010229 GO:GO:0048571
GO:GO:0048572 EMBL:AB041839 EMBL:AB564434 Gramene:Q9FRZ7
Uniprot:Q9FRZ7
Length = 342
Score = 122 (48.0 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 25/76 (32%), Positives = 36/76 (47%)
Query: 2 RKCELCEC-PARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGP 60
R C+ C P+ +YC +D A LC CD +VH AN + ++H R +C C+ A
Sbjct: 33 RPCDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEACEQAPAALACRA 92
Query: 61 KLGPTVSVCDACVAAA 76
CD V +A
Sbjct: 93 DAAALCVACDVQVHSA 108
>UNIPROTKB|Q9FDX8 [details] [associations]
symbol:HD1 "Zinc finger protein HD1" species:39947 "Oryza
sativa Japonica Group" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0045892 GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 EMBL:AP008212 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0009908 GO:GO:0009909 GO:GO:0010229
eggNOG:NOG281690 OMA:RVCEACE GO:GO:0048579 GO:GO:0048576
EMBL:AB041837 EMBL:AB041838 EMBL:AB375859 EMBL:AP003044
EMBL:AP005813 RefSeq:NP_001057378.1 UniGene:Os.1189 STRING:Q9FDX8
EnsemblPlants:LOC_Os06g16370.1 GeneID:4340746 KEGG:osa:4340746
Gramene:Q9FDX8 ProtClustDB:CLSN2696123 GO:GO:0048571 GO:GO:0048572
Uniprot:Q9FDX8
Length = 395
Score = 121 (47.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 25/76 (32%), Positives = 36/76 (47%)
Query: 2 RKCELCEC-PARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGP 60
R C+ C P+ +YC +D A LC CD +VH AN + ++H R +C C+ A
Sbjct: 33 RPCDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEACERAPAALACRA 92
Query: 61 KLGPTVSVCDACVAAA 76
CD V +A
Sbjct: 93 DAAALCVACDVQVHSA 108
>UNIPROTKB|Q9FE92 [details] [associations]
symbol:Hd1 "Heading day 1" species:4530 "Oryza sativa"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0048571 "long-day
photoperiodism" evidence=IEP] [GO:0048572 "short-day
photoperiodism" evidence=IEP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0009909 GO:GO:0010229 GO:GO:0048571 GO:GO:0048572
EMBL:JN402207 EMBL:AB041840 EMBL:AB041842 Gramene:Q9FE92
Genevestigator:Q9FE92 Uniprot:Q9FE92
Length = 407
Score = 121 (47.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 25/76 (32%), Positives = 36/76 (47%)
Query: 2 RKCELCEC-PARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGP 60
R C+ C P+ +YC +D A LC CD +VH AN + ++H R +C C+ A
Sbjct: 33 RPCDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEACERAPAALACRA 92
Query: 61 KLGPTVSVCDACVAAA 76
CD V +A
Sbjct: 93 DAAALCVACDVQVYSA 108
>TAIR|locus:2051104 [details] [associations]
symbol:BBX12 "B-box domain protein 12" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC002332 EMBL:BT002067 EMBL:AY128321
EMBL:BT006572 IPI:IPI00527026 IPI:IPI00539934 PIR:C84746
RefSeq:NP_850211.1 RefSeq:NP_973589.1 UniGene:At.43493
IntAct:O22800 STRING:O22800 EnsemblPlants:AT2G33500.1 GeneID:817915
KEGG:ath:AT2G33500 TAIR:At2g33500 eggNOG:NOG269245
HOGENOM:HOG000243233 InParanoid:O22800 OMA:ATHERSA PhylomeDB:O22800
ProtClustDB:CLSN2713949 Genevestigator:O22800 Uniprot:O22800
Length = 402
Score = 120 (47.3 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 4 CELC-ECPARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVC 49
CE C E A ++C +D A LC CD+ VH AN L KH+R +C C
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNC 58
>TAIR|locus:2143206 [details] [associations]
symbol:CO "CONSTANS" species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;NAS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IGI] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010018 "far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009908 GO:GO:0009909 EMBL:AL391144 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:X94937 EMBL:BT001926 EMBL:AY086574
IPI:IPI00535908 IPI:IPI00657421 PIR:A56133 RefSeq:NP_001031887.1
RefSeq:NP_197088.1 UniGene:At.18 IntAct:Q39057 MINT:MINT-6608985
STRING:Q39057 EnsemblPlants:AT5G15840.1 GeneID:831441
KEGG:ath:AT5G15840 TAIR:At5g15840 eggNOG:NOG306777
InParanoid:Q39057 KO:K12135 OMA:CHADSAY PhylomeDB:Q39057
Genevestigator:Q39057 GO:GO:0010018 Uniprot:Q39057
Length = 373
Score = 119 (46.9 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 2 RKCELCECPA-RMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGP 60
R C+ C A +YC +D A LC CD +VH AN + ++H R +C C+ P A+
Sbjct: 18 RPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCER-AP--AAFL 74
Query: 61 KLGPTVSVCDAC 72
S+C AC
Sbjct: 75 CEADDASLCTAC 86
Score = 117 (46.2 bits), Expect = 0.00010, P = 0.00010
Identities = 23/43 (53%), Positives = 27/43 (62%)
Query: 1 MRKCELCE-CPARMYCESDQASLCWDCDEKVHCANFLVAKHLR 42
+R CE CE PA CE+D ASLC CD +VH AN L +H R
Sbjct: 60 VRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQR 102
>TAIR|locus:2061330 [details] [associations]
symbol:STH "salt tolerance homologue" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0019904 "protein domain specific binding"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0010224 "response to UV-B"
evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AC007169 HOGENOM:HOG000239240 UniGene:At.24192
UniGene:At.69838 EMBL:AF323666 EMBL:AF325077 EMBL:AF370311
EMBL:AY063097 IPI:IPI00545007 PIR:A84720 RefSeq:NP_565722.1
ProteinModelPortal:Q9SID1 SMR:Q9SID1 IntAct:Q9SID1 STRING:Q9SID1
EnsemblPlants:AT2G31380.1 GeneID:817696 KEGG:ath:AT2G31380
TAIR:At2g31380 eggNOG:NOG279894 InParanoid:Q9SID1 OMA:CAKCDVE
PhylomeDB:Q9SID1 ProtClustDB:CLSN2682276 Genevestigator:Q9SID1
GermOnline:AT2G31380 Uniprot:Q9SID1
Length = 238
Score = 115 (45.5 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 3 KCELCE-CPARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTP 54
+C++CE PA + C +D+A+LC CD +VH AN L +KH R L + P
Sbjct: 4 QCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPP 56
>TAIR|locus:2010504 [details] [associations]
symbol:BBX13 "B-box domain protein 13" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017
SMART:SM00336 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 EMBL:AC069471
HOGENOM:HOG000243233 ProtClustDB:CLSN2713949 EMBL:AY037206
EMBL:BT002681 IPI:IPI00538865 PIR:B86406 RefSeq:NP_174126.1
UniGene:At.19754 ProteinModelPortal:Q9C7E8 SMR:Q9C7E8 IntAct:Q9C7E8
STRING:Q9C7E8 PRIDE:Q9C7E8 EnsemblPlants:AT1G28050.1 GeneID:839698
KEGG:ath:AT1G28050 TAIR:At1g28050 eggNOG:NOG245106
InParanoid:Q9C7E8 OMA:SCGRYKQ PhylomeDB:Q9C7E8
Genevestigator:Q9C7E8 GermOnline:AT1G28050 Uniprot:Q9C7E8
Length = 433
Score = 119 (46.9 bits), Expect = 7.7e-05, P = 7.6e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 4 CELC-ECPARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVC 49
C+ C E A ++C +D A LC CD++VH AN L KH+R +C C
Sbjct: 9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNC 55
>TAIR|locus:2122759 [details] [associations]
symbol:bbx23 "B-box domain protein 23" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008270 GO:GO:0003700
GO:GO:0005622 EMBL:AF096373 EMBL:AL161516 HOGENOM:HOG000239240
EMBL:AL049488 EMBL:AY122916 IPI:IPI00525768 PIR:T01973
RefSeq:NP_192762.1 UniGene:At.33641 ProteinModelPortal:O82617
SMR:O82617 EnsemblPlants:AT4G10240.1 GeneID:826615
KEGG:ath:AT4G10240 TAIR:At4g10240 eggNOG:NOG273282
InParanoid:O82617 OMA:TENSECS PhylomeDB:O82617
ProtClustDB:CLSN2915973 Genevestigator:O82617 Uniprot:O82617
Length = 162
Score = 108 (43.1 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 31/71 (43%), Positives = 36/71 (50%)
Query: 3 KCELCE-CPARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGPK 61
+CE+CE A + C SD+A LC CD KVH AN L +H R L S T ASG
Sbjct: 4 QCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATT--ASGAP 61
Query: 62 LGPTVSVCDAC 72
L CD C
Sbjct: 62 L------CDIC 66
>TAIR|locus:2005624 [details] [associations]
symbol:BBX21 "B-box domain protein 21" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009641 "shade avoidance"
evidence=IGI;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 GO:GO:0009641 HOGENOM:HOG000239240 EMBL:AC006434
EMBL:AB493536 IPI:IPI00536705 PIR:G96785 RefSeq:NP_177686.1
UniGene:At.34761 UniGene:At.69592 ProteinModelPortal:Q9LQZ7
SMR:Q9LQZ7 IntAct:Q9LQZ7 STRING:Q9LQZ7 EnsemblPlants:AT1G75540.1
GeneID:843890 KEGG:ath:AT1G75540 TAIR:At1g75540 eggNOG:NOG315170
InParanoid:Q9LQZ7 OMA:CDICQDK PhylomeDB:Q9LQZ7
ProtClustDB:CLSN2682536 Genevestigator:Q9LQZ7 GermOnline:AT1G75540
Uniprot:Q9LQZ7
Length = 331
Score = 117 (46.2 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 3 KCELCECP-ARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLT 53
+C++C+ A ++C +D+ASLC CD +VH AN L +KHLR L + S T
Sbjct: 4 RCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNT 55
>TAIR|locus:2143221 [details] [associations]
symbol:COL1 "CONSTANS-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0009909
EMBL:AL391144 EMBL:Y10555 EMBL:Y10556 EMBL:AY074369 EMBL:BT002363
IPI:IPI00520338 PIR:T51414 RefSeq:NP_197089.1 UniGene:At.24486
UniGene:At.48027 IntAct:O50055 STRING:O50055
EnsemblPlants:AT5G15850.1 GeneID:831442 KEGG:ath:AT5G15850
TAIR:At5g15850 eggNOG:NOG314154 HOGENOM:HOG000238833
InParanoid:O50055 OMA:QSCERAP PhylomeDB:O50055
ProtClustDB:CLSN2685199 Genevestigator:O50055 GermOnline:AT5G15850
Uniprot:O50055
Length = 355
Score = 114 (45.2 bits), Expect = 0.00022, P = 0.00022
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 4 CELCECPA-RMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQ 50
C+ C A +YC +D A LC CD +VH AN L ++H R +C C+
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCE 59
Score = 113 (44.8 bits), Expect = 0.00028, P = 0.00028
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 1 MRKCELCE-CPARMYCESDQASLCWDCDEKVHCANFLVAKHLR 42
+R C+ CE PA +C++D ASLC CD ++H AN L +H R
Sbjct: 52 VRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQR 94
>TAIR|locus:2028421 [details] [associations]
symbol:BBX17 "B-box domain protein 17" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 IPI:IPI00544498
RefSeq:NP_175339.2 UniGene:At.38297 EnsemblPlants:AT1G49130.1
GeneID:841336 KEGG:ath:AT1G49130 OMA:VATKHER Uniprot:F4I1N0
Length = 326
Score = 112 (44.5 bits), Expect = 0.00032, P = 0.00032
Identities = 25/45 (55%), Positives = 26/45 (57%)
Query: 2 RKCELC-ECPARMYCESDQASLCWDCDEKVHCANFLVAKHLR-CL 44
R CELC A YC SD A LC CDE VH AN + KH R CL
Sbjct: 26 RACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCL 70
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.131 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 264 214 0.00085 112 3 11 22 0.50 32
31 0.49 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 612 (65 KB)
Total size of DFA: 192 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.14u 0.13s 18.27t Elapsed: 00:00:01
Total cpu time: 18.14u 0.13s 18.27t Elapsed: 00:00:01
Start: Mon May 20 17:00:05 2013 End: Mon May 20 17:00:06 2013