Query 024658
Match_columns 264
No_of_seqs 157 out of 429
Neff 3.8
Searched_HMMs 46136
Date Fri Mar 29 06:24:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024658.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024658hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd00021 BBOX B-Box-type zinc f 97.4 0.00013 2.8E-09 47.4 2.4 38 2-45 1-39 (39)
2 smart00336 BBOX B-Box-type zin 96.8 0.0012 2.6E-08 43.3 2.7 39 1-45 3-42 (42)
3 PF00643 zf-B_box: B-box zinc 96.5 0.0014 2.9E-08 43.8 1.4 39 1-45 3-42 (42)
4 PF06524 NOA36: NOA36 protein; 96.3 0.0034 7.4E-08 59.3 3.3 12 111-122 279-290 (314)
5 KOG4367 Predicted Zn-finger pr 96.2 0.0012 2.6E-08 66.2 0.2 74 3-76 164-253 (699)
6 cd00021 BBOX B-Box-type zinc f 96.2 0.0027 5.8E-08 41.1 1.5 37 49-86 3-39 (39)
7 KOG0585 Ca2+/calmodulin-depend 96.2 0.002 4.3E-08 65.2 1.2 51 200-252 192-242 (576)
8 KOG0198 MEKK and related serin 95.9 0.003 6.6E-08 59.8 1.1 29 224-252 121-149 (313)
9 KOG4279 Serine/threonine prote 95.6 0.0028 6.2E-08 67.0 -0.2 50 200-259 665-719 (1226)
10 KOG0581 Mitogen-activated prot 95.4 0.0073 1.6E-07 58.8 1.5 30 223-252 181-211 (364)
11 smart00336 BBOX B-Box-type zin 95.3 0.012 2.7E-07 38.4 2.0 40 42-85 2-41 (42)
12 PF06524 NOA36: NOA36 protein; 95.1 0.019 4E-07 54.5 3.2 8 59-66 183-190 (314)
13 PF09026 CENP-B_dimeris: Centr 95.0 0.0063 1.4E-07 49.8 0.0 6 135-140 40-45 (101)
14 PF10446 DUF2457: Protein of u 94.8 0.019 4.1E-07 57.3 2.6 16 234-249 217-232 (458)
15 KOG0575 Polo-like serine/threo 94.6 0.0099 2.1E-07 60.9 0.0 36 217-252 115-150 (592)
16 PF00643 zf-B_box: B-box zinc 94.6 0.02 4.3E-07 38.1 1.5 37 48-85 5-41 (42)
17 KOG0615 Serine/threonine prote 94.3 0.018 4E-07 57.4 1.2 35 218-252 274-308 (475)
18 PF09026 CENP-B_dimeris: Centr 93.7 0.018 3.9E-07 47.1 0.0 14 125-138 33-46 (101)
19 PHA02882 putative serine/threo 93.7 0.032 6.9E-07 49.2 1.5 29 224-252 130-158 (294)
20 PF10446 DUF2457: Protein of u 93.6 0.04 8.7E-07 55.0 2.1 16 176-191 188-203 (458)
21 cd07868 STKc_CDK8 Catalytic do 93.5 0.034 7.3E-07 48.9 1.3 29 224-252 112-140 (317)
22 KOG0592 3-phosphoinositide-dep 93.4 0.036 7.8E-07 56.9 1.5 28 225-252 179-206 (604)
23 cd07867 STKc_CDC2L6 Catalytic 93.3 0.04 8.7E-07 48.2 1.4 29 224-252 112-140 (317)
24 KOG0943 Predicted ubiquitin-pr 93.2 0.055 1.2E-06 60.1 2.6 18 89-106 1730-1747(3015)
25 KOG1035 eIF-2alpha kinase GCN2 93.2 0.033 7.3E-07 61.3 1.0 27 226-252 703-729 (1351)
26 cd07862 STKc_CDK6 Catalytic do 93.1 0.042 9E-07 47.5 1.2 29 224-252 114-142 (290)
27 cd05037 PTK_Jak_rpt1 Pseudokin 93.1 0.04 8.6E-07 46.2 1.0 30 223-252 104-133 (259)
28 cd07871 STKc_PCTAIRE3 Catalyti 93.1 0.048 1E-06 47.7 1.6 29 224-252 107-135 (288)
29 cd05102 PTKc_VEGFR3 Catalytic 92.9 0.042 9.2E-07 49.0 1.1 28 225-252 179-206 (338)
30 cd05631 STKc_GRK4 Catalytic do 92.8 0.05 1.1E-06 47.5 1.3 30 223-252 105-134 (285)
31 cd07859 STKc_TDY_MAPK_plant Ca 92.8 0.053 1.2E-06 47.8 1.4 29 224-252 107-135 (338)
32 cd05571 STKc_PKB Catalytic dom 92.7 0.051 1.1E-06 48.7 1.3 28 225-252 100-127 (323)
33 cd05614 STKc_MSK2_N N-terminal 92.7 0.056 1.2E-06 48.3 1.4 28 225-252 110-137 (332)
34 cd05575 STKc_SGK Catalytic dom 92.6 0.054 1.2E-06 48.4 1.3 28 225-252 101-128 (323)
35 cd05593 STKc_PKB_gamma Catalyt 92.5 0.057 1.2E-06 48.7 1.3 28 225-252 100-127 (328)
36 cd05602 STKc_SGK1 Catalytic do 92.5 0.059 1.3E-06 48.2 1.4 28 225-252 101-128 (325)
37 cd05078 PTK_Jak2_Jak3_rpt1 Pse 92.2 0.059 1.3E-06 46.0 1.0 29 225-253 105-133 (258)
38 cd05042 PTKc_Aatyk Catalytic d 92.2 0.067 1.5E-06 45.7 1.3 29 224-252 104-132 (269)
39 cd05628 STKc_NDR1 Catalytic do 92.2 0.065 1.4E-06 48.9 1.3 31 222-252 103-133 (363)
40 cd05108 PTKc_EGFR Catalytic do 92.2 0.066 1.4E-06 47.4 1.3 28 225-252 114-141 (316)
41 PHA03212 serine/threonine kina 92.2 0.069 1.5E-06 50.2 1.5 29 224-252 186-214 (391)
42 cd07878 STKc_p38beta_MAPK11 Ca 92.2 0.062 1.4E-06 48.2 1.1 29 224-252 122-150 (343)
43 cd05621 STKc_ROCK2 Catalytic d 92.2 0.066 1.4E-06 49.7 1.3 28 225-252 147-174 (370)
44 cd05629 STKc_NDR_like_fungal C 92.1 0.069 1.5E-06 48.9 1.4 27 226-252 107-133 (377)
45 cd07869 STKc_PFTAIRE1 Catalyti 92.1 0.068 1.5E-06 47.0 1.2 28 225-252 108-135 (303)
46 cd05586 STKc_Sck1_like Catalyt 92.1 0.067 1.4E-06 47.8 1.2 28 225-252 101-128 (330)
47 cd05076 PTK_Tyk2_rpt1 Pseudoki 92.1 0.075 1.6E-06 46.3 1.5 30 223-252 120-149 (274)
48 PTZ00036 glycogen synthase kin 92.1 0.07 1.5E-06 51.0 1.4 27 226-252 176-202 (440)
49 cd08226 PK_STRAD_beta Pseudoki 92.0 0.071 1.5E-06 47.6 1.3 29 224-252 105-133 (328)
50 KOG0658 Glycogen synthase kina 92.0 0.058 1.3E-06 52.7 0.8 34 225-258 130-168 (364)
51 cd05585 STKc_YPK1_like Catalyt 92.0 0.075 1.6E-06 47.3 1.4 28 225-252 98-125 (312)
52 cd07874 STKc_JNK3 Catalytic do 92.0 0.077 1.7E-06 47.9 1.5 28 225-252 124-151 (355)
53 cd05587 STKc_cPKC Catalytic do 91.9 0.076 1.6E-06 47.5 1.3 30 223-252 104-133 (324)
54 cd05626 STKc_LATS2 Catalytic d 91.9 0.072 1.6E-06 49.1 1.2 27 226-252 107-133 (381)
55 cd05603 STKc_SGK2 Catalytic do 91.9 0.075 1.6E-06 47.4 1.3 28 225-252 101-128 (321)
56 PHA03210 serine/threonine kina 91.9 0.076 1.6E-06 51.8 1.4 28 225-252 272-299 (501)
57 PLN00181 protein SPA1-RELATED; 91.8 0.07 1.5E-06 54.8 1.2 29 224-252 84-112 (793)
58 PHA03207 serine/threonine kina 91.7 0.085 1.8E-06 49.0 1.5 29 224-252 189-217 (392)
59 cd07863 STKc_CDK4 Catalytic do 91.7 0.083 1.8E-06 45.4 1.3 29 224-252 112-140 (288)
60 cd08227 PK_STRAD_alpha Pseudok 91.7 0.074 1.6E-06 47.5 1.0 28 225-252 106-133 (327)
61 cd05591 STKc_nPKC_epsilon Cata 91.6 0.086 1.9E-06 47.1 1.4 28 225-252 101-128 (321)
62 cd07876 STKc_JNK2 Catalytic do 91.6 0.087 1.9E-06 47.8 1.5 28 225-252 128-155 (359)
63 cd05598 STKc_LATS Catalytic do 91.6 0.08 1.7E-06 48.3 1.2 27 226-252 107-133 (376)
64 cd05620 STKc_nPKC_delta Cataly 91.6 0.087 1.9E-06 47.2 1.4 28 225-252 101-128 (316)
65 PTZ00284 protein kinase; Provi 91.6 0.087 1.9E-06 50.2 1.4 29 225-253 236-265 (467)
66 PLN03225 Serine/threonine-prot 91.5 0.082 1.8E-06 53.1 1.3 27 226-252 261-287 (566)
67 PHA03209 serine/threonine kina 91.5 0.089 1.9E-06 48.1 1.4 28 225-252 162-189 (357)
68 cd05612 STKc_PRKX_like Catalyt 91.5 0.091 2E-06 46.2 1.4 29 224-252 105-133 (291)
69 cd07853 STKc_NLK Catalytic dom 91.5 0.094 2E-06 47.9 1.5 28 225-252 108-135 (372)
70 cd05595 STKc_PKB_beta Catalyti 91.5 0.085 1.8E-06 47.4 1.2 29 224-252 99-127 (323)
71 cd05109 PTKc_HER2 Catalytic do 91.5 0.078 1.7E-06 45.6 0.9 30 223-252 112-141 (279)
72 cd05075 PTKc_Axl Catalytic dom 91.5 0.089 1.9E-06 44.7 1.2 28 225-252 117-144 (272)
73 KOG0660 Mitogen-activated prot 91.4 0.079 1.7E-06 51.7 1.0 31 222-252 127-157 (359)
74 cd07872 STKc_PCTAIRE2 Catalyti 91.4 0.097 2.1E-06 46.1 1.5 28 225-252 109-136 (309)
75 cd05573 STKc_ROCK_NDR_like Cat 91.4 0.091 2E-06 46.9 1.3 27 226-252 107-133 (350)
76 cd05599 STKc_NDR_like Catalyti 91.4 0.092 2E-06 47.5 1.3 28 225-252 106-133 (364)
77 cd05604 STKc_SGK3 Catalytic do 91.3 0.093 2E-06 46.9 1.2 28 225-252 101-128 (325)
78 cd05096 PTKc_DDR1 Catalytic do 91.2 0.1 2.2E-06 45.8 1.4 29 224-252 142-170 (304)
79 cd05625 STKc_LATS1 Catalytic d 91.2 0.097 2.1E-06 48.0 1.3 27 226-252 107-133 (382)
80 PTZ00263 protein kinase A cata 91.2 0.099 2.1E-06 47.1 1.3 27 226-252 124-150 (329)
81 cd05616 STKc_cPKC_beta Catalyt 91.1 0.1 2.2E-06 46.7 1.3 30 223-252 104-133 (323)
82 cd05592 STKc_nPKC_theta_delta 91.1 0.1 2.3E-06 46.7 1.3 28 225-252 101-128 (316)
83 PLN00034 mitogen-activated pro 91.0 0.1 2.2E-06 47.3 1.3 29 224-252 172-200 (353)
84 KOG0600 Cdc2-related protein k 91.0 0.097 2.1E-06 53.4 1.2 34 219-252 217-250 (560)
85 cd07857 STKc_MPK1 Catalytic do 91.0 0.12 2.5E-06 46.3 1.6 29 224-252 109-137 (332)
86 cd05091 PTKc_Ror2 Catalytic do 91.0 0.1 2.2E-06 44.9 1.1 28 225-252 129-156 (283)
87 cd05086 PTKc_Aatyk2 Catalytic 91.0 0.097 2.1E-06 45.0 1.0 27 226-252 105-131 (268)
88 cd05077 PTK_Jak1_rpt1 Pseudoki 90.9 0.11 2.4E-06 44.8 1.3 32 222-253 107-138 (262)
89 cd05608 STKc_GRK1 Catalytic do 90.9 0.12 2.6E-06 45.0 1.5 29 224-252 101-129 (280)
90 cd05601 STKc_CRIK Catalytic do 90.9 0.1 2.2E-06 46.5 1.1 27 226-252 108-134 (330)
91 cd05584 STKc_p70S6K Catalytic 90.9 0.11 2.4E-06 46.6 1.3 28 225-252 105-132 (323)
92 cd07875 STKc_JNK1 Catalytic do 90.8 0.11 2.5E-06 47.1 1.4 28 225-252 131-158 (364)
93 KOG0579 Ste20-like serine/thre 90.8 0.072 1.6E-06 56.4 0.0 48 193-252 115-162 (1187)
94 cd05046 PTK_CCK4 Pseudokinase 90.7 0.11 2.3E-06 44.4 1.0 30 223-252 120-149 (275)
95 cd05596 STKc_ROCK Catalytic do 90.7 0.12 2.5E-06 47.8 1.3 27 226-252 148-174 (370)
96 cd05590 STKc_nPKC_eta Catalyti 90.7 0.12 2.6E-06 46.4 1.4 29 224-252 100-128 (320)
97 cd05622 STKc_ROCK1 Catalytic d 90.7 0.11 2.5E-06 48.0 1.2 28 225-252 147-174 (371)
98 KOG0578 p21-activated serine/t 90.6 0.092 2E-06 53.7 0.6 35 219-253 368-402 (550)
99 cd05582 STKc_RSK_N N-terminal 90.6 0.12 2.6E-06 46.0 1.3 28 225-252 103-130 (318)
100 PTZ00426 cAMP-dependent protei 90.5 0.12 2.7E-06 47.3 1.3 29 224-252 135-163 (340)
101 PHA03211 serine/threonine kina 90.5 0.12 2.6E-06 50.6 1.2 28 225-252 265-292 (461)
102 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 90.4 0.13 2.8E-06 44.3 1.3 30 223-252 111-140 (284)
103 cd05627 STKc_NDR2 Catalytic do 90.4 0.12 2.7E-06 46.9 1.2 28 225-252 106-133 (360)
104 KOG0664 Nemo-like MAPK-related 90.4 0.1 2.2E-06 50.8 0.7 28 225-252 161-188 (449)
105 cd05576 STKc_RPK118_like Catal 90.4 0.13 2.9E-06 43.6 1.3 31 222-252 87-117 (237)
106 cd05106 PTKc_CSF-1R Catalytic 90.3 0.12 2.6E-06 48.0 1.0 29 224-252 216-244 (374)
107 cd05064 PTKc_EphR_A10 Catalyti 90.3 0.12 2.6E-06 44.4 1.0 31 222-252 109-139 (266)
108 cd07848 STKc_CDKL5 Catalytic d 90.2 0.14 2.9E-06 44.2 1.3 29 224-252 104-132 (287)
109 cd05600 STKc_Sid2p_Dbf2p Catal 90.2 0.14 3.1E-06 45.8 1.4 28 225-252 106-133 (333)
110 KOG0192 Tyrosine kinase specif 90.2 0.12 2.7E-06 49.6 1.0 30 223-252 145-175 (362)
111 cd05597 STKc_DMPK_like Catalyt 90.2 0.14 3E-06 46.2 1.3 28 225-252 107-134 (331)
112 cd05074 PTKc_Tyro3 Catalytic d 90.2 0.13 2.8E-06 43.8 1.0 31 223-253 116-146 (273)
113 cd05035 PTKc_Axl_like Catalyti 90.2 0.13 2.7E-06 43.6 1.0 28 225-252 118-145 (273)
114 cd05589 STKc_PKN Catalytic dom 90.1 0.14 3E-06 45.8 1.3 31 222-252 103-133 (324)
115 cd05624 STKc_MRCK_beta Catalyt 90.0 0.13 2.9E-06 46.3 1.1 27 226-252 108-134 (331)
116 cd05633 STKc_GRK3 Catalytic do 90.0 0.14 3.1E-06 44.7 1.2 29 224-252 101-129 (279)
117 cd05570 STKc_PKC Catalytic dom 90.0 0.15 3.3E-06 45.5 1.4 29 224-252 100-128 (318)
118 cd05618 STKc_aPKC_iota Catalyt 90.0 0.15 3.2E-06 46.1 1.3 29 224-252 100-128 (329)
119 cd05623 STKc_MRCK_alpha Cataly 89.9 0.14 3E-06 46.1 1.1 28 225-252 107-134 (332)
120 KOG0594 Protein kinase PCTAIRE 89.9 0.14 3E-06 49.4 1.1 29 224-252 124-152 (323)
121 cd05619 STKc_nPKC_theta Cataly 89.9 0.15 3.3E-06 45.8 1.4 28 225-252 101-128 (316)
122 cd05111 PTK_HER3 Pseudokinase 89.9 0.13 2.9E-06 44.6 0.9 28 225-252 114-141 (279)
123 cd00192 PTKc Catalytic domain 89.9 0.15 3.3E-06 42.3 1.2 30 223-252 108-137 (262)
124 cd05617 STKc_aPKC_zeta Catalyt 89.8 0.16 3.4E-06 45.8 1.3 29 224-252 100-128 (327)
125 cd05080 PTKc_Tyk2_rpt2 Catalyt 89.8 0.13 2.9E-06 44.3 0.8 29 224-252 111-139 (283)
126 cd07861 STKc_CDK1_euk Catalyti 89.7 0.16 3.5E-06 43.5 1.3 30 223-252 104-133 (285)
127 cd05051 PTKc_DDR Catalytic dom 89.7 0.16 3.4E-06 43.9 1.2 27 226-252 136-162 (296)
128 cd05089 PTKc_Tie1 Catalytic do 89.6 0.15 3.2E-06 44.8 1.0 28 225-252 124-151 (297)
129 cd05594 STKc_PKB_alpha Catalyt 89.6 0.14 3.1E-06 45.7 1.0 28 225-252 100-128 (325)
130 cd05147 RIO1_euk RIO kinase fa 89.6 0.17 3.7E-06 43.4 1.4 28 225-252 122-150 (190)
131 cd08216 PK_STRAD Pseudokinase 89.6 0.14 3.1E-06 44.8 0.9 28 225-252 106-133 (314)
132 cd05084 PTKc_Fes Catalytic dom 89.5 0.17 3.6E-06 42.7 1.3 30 223-252 97-126 (252)
133 cd05632 STKc_GRK5 Catalytic do 89.5 0.16 3.6E-06 44.3 1.2 30 223-252 105-134 (285)
134 cd05053 PTKc_FGFR Catalytic do 89.5 0.13 2.9E-06 44.4 0.6 28 225-252 137-164 (293)
135 cd05052 PTKc_Abl Catalytic dom 89.4 0.15 3.3E-06 43.4 0.9 28 225-252 109-136 (263)
136 PF00069 Pkinase: Protein kina 89.4 0.17 3.7E-06 42.3 1.2 30 223-252 101-130 (260)
137 cd05094 PTKc_TrkC Catalytic do 89.3 0.16 3.4E-06 44.3 0.9 30 223-252 126-155 (291)
138 cd05048 PTKc_Ror Catalytic Dom 89.2 0.16 3.6E-06 43.5 1.0 28 225-252 129-156 (283)
139 cd07837 STKc_CdkB_plant Cataly 89.2 0.18 3.9E-06 43.5 1.2 32 221-252 111-142 (295)
140 cd05588 STKc_aPKC Catalytic do 89.1 0.19 4E-06 45.3 1.3 29 224-252 100-128 (329)
141 cd07839 STKc_CDK5 Catalytic do 89.1 0.19 4.1E-06 43.1 1.3 32 221-252 100-131 (284)
142 cd05101 PTKc_FGFR2 Catalytic d 89.1 0.17 3.6E-06 44.4 1.0 28 225-252 142-169 (304)
143 cd05082 PTKc_Csk Catalytic dom 89.1 0.17 3.6E-06 42.9 0.9 28 225-252 107-134 (256)
144 PTZ00267 NIMA-related protein 89.1 0.17 3.7E-06 48.8 1.1 28 225-252 174-201 (478)
145 cd05093 PTKc_TrkB Catalytic do 89.1 0.18 3.8E-06 43.9 1.1 31 222-252 122-152 (288)
146 cd05116 PTKc_Syk Catalytic dom 89.0 0.18 3.9E-06 42.9 1.1 29 224-252 99-127 (257)
147 cd06624 STKc_ASK Catalytic dom 89.0 0.2 4.2E-06 42.8 1.3 28 225-252 113-140 (268)
148 cd06658 STKc_PAK5 Catalytic do 89.0 0.2 4.3E-06 44.2 1.3 29 224-252 122-150 (292)
149 cd07843 STKc_CDC2L1 Catalytic 89.0 0.19 4.1E-06 43.6 1.2 31 222-252 108-138 (293)
150 PTZ00283 serine/threonine prot 89.0 0.19 4E-06 49.2 1.3 28 225-252 148-175 (496)
151 cd07870 STKc_PFTAIRE2 Catalyti 88.9 0.22 4.7E-06 43.1 1.6 29 224-252 107-135 (291)
152 cd05615 STKc_cPKC_alpha Cataly 88.9 0.2 4.3E-06 45.0 1.3 30 223-252 104-133 (323)
153 cd05092 PTKc_TrkA Catalytic do 88.7 0.2 4.4E-06 43.4 1.2 29 224-252 126-154 (280)
154 cd07847 STKc_CDKL1_4 Catalytic 88.7 0.2 4.4E-06 42.7 1.2 32 221-252 101-132 (286)
155 cd05090 PTKc_Ror1 Catalytic do 88.7 0.17 3.8E-06 43.6 0.8 29 224-252 128-156 (283)
156 cd05104 PTKc_Kit Catalytic dom 88.6 0.21 4.5E-06 46.3 1.3 29 224-252 218-246 (375)
157 cd05607 STKc_GRK7 Catalytic do 88.6 0.2 4.4E-06 43.5 1.1 28 225-252 100-127 (277)
158 cd05054 PTKc_VEGFR Catalytic d 88.5 0.2 4.4E-06 45.6 1.1 29 224-252 177-205 (337)
159 cd05110 PTKc_HER4 Catalytic do 88.3 0.21 4.6E-06 44.0 1.1 29 224-252 113-141 (303)
160 cd05055 PTKc_PDGFR Catalytic d 88.2 0.18 3.9E-06 44.6 0.6 30 223-252 144-173 (302)
161 cd05040 PTKc_Ack_like Catalyti 88.2 0.21 4.6E-06 42.1 1.0 28 225-252 102-129 (257)
162 cd05115 PTKc_Zap-70 Catalytic 88.2 0.2 4.4E-06 42.9 0.8 29 224-252 99-127 (257)
163 KOG0666 Cyclin C-dependent kin 88.2 0.17 3.8E-06 49.7 0.5 27 226-252 138-164 (438)
164 cd05088 PTKc_Tie2 Catalytic do 88.2 0.23 4.9E-06 43.9 1.2 31 223-253 127-157 (303)
165 cd05095 PTKc_DDR2 Catalytic do 88.1 0.21 4.6E-06 43.6 1.0 29 224-252 134-162 (296)
166 KOG0659 Cdk activating kinase 88.0 0.15 3.2E-06 48.9 -0.1 40 213-252 94-133 (318)
167 cd06630 STKc_MEKK1 Catalytic d 88.0 0.25 5.5E-06 41.7 1.3 29 225-253 108-136 (268)
168 KOG0598 Ribosomal protein S6 k 88.0 0.24 5.2E-06 48.4 1.3 35 226-260 131-177 (357)
169 cd06645 STKc_MAP4K3 Catalytic 88.0 0.26 5.6E-06 41.9 1.4 29 224-252 110-138 (267)
170 cd05045 PTKc_RET Catalytic dom 88.0 0.2 4.3E-06 43.5 0.7 30 223-252 130-159 (290)
171 cd07844 STKc_PCTAIRE_like Cata 87.9 0.25 5.5E-06 42.6 1.3 29 224-252 107-135 (291)
172 cd05118 STKc_CMGC Catalytic do 87.9 0.25 5.5E-06 42.0 1.2 29 224-252 102-130 (283)
173 cd05103 PTKc_VEGFR2 Catalytic 87.8 0.21 4.6E-06 45.2 0.8 29 224-252 183-211 (343)
174 cd07849 STKc_ERK1_2_like Catal 87.7 0.26 5.6E-06 44.2 1.3 28 225-252 111-138 (336)
175 cd05049 PTKc_Trk Catalytic dom 87.7 0.24 5.3E-06 42.2 1.0 31 222-252 124-154 (280)
176 cd05043 PTK_Ryk Pseudokinase d 87.6 0.23 5E-06 42.6 0.9 28 225-252 122-149 (280)
177 cd05145 RIO1_like RIO kinase f 87.6 0.26 5.6E-06 41.6 1.2 30 223-252 120-150 (190)
178 PRK10345 hypothetical protein; 87.5 0.26 5.6E-06 43.7 1.1 27 226-252 110-137 (210)
179 cd05062 PTKc_IGF-1R Catalytic 87.5 0.27 5.8E-06 42.3 1.2 27 226-252 125-151 (277)
180 cd05579 STKc_MAST_like Catalyt 87.5 0.28 6.1E-06 40.9 1.3 29 224-252 97-125 (265)
181 cd05058 PTKc_Met_Ron Catalytic 87.5 0.26 5.6E-06 41.7 1.1 27 226-252 104-130 (262)
182 cd05605 STKc_GRK4_like Catalyt 87.4 0.28 6E-06 42.9 1.3 29 224-252 106-134 (285)
183 cd05630 STKc_GRK6 Catalytic do 87.4 0.27 5.8E-06 43.1 1.2 29 224-252 106-134 (285)
184 cd07842 STKc_CDK8_like Catalyt 87.4 0.28 6E-06 42.7 1.2 28 225-252 113-140 (316)
185 cd05038 PTKc_Jak_rpt2 Catalyti 87.4 0.29 6.3E-06 41.6 1.4 30 223-252 112-141 (284)
186 cd05036 PTKc_ALK_LTK Catalytic 87.4 0.23 4.9E-06 42.9 0.7 29 225-253 121-149 (277)
187 cd05032 PTKc_InsR_like Catalyt 87.4 0.25 5.5E-06 42.1 1.0 28 225-252 124-151 (277)
188 cd05610 STKc_MASTL Catalytic d 87.4 0.26 5.7E-06 50.1 1.2 29 224-252 108-136 (669)
189 KOG1187 Serine/threonine prote 87.3 0.31 6.8E-06 46.4 1.7 26 227-252 181-209 (361)
190 KOG0201 Serine/threonine prote 87.3 0.25 5.5E-06 49.6 1.1 26 227-252 118-143 (467)
191 cd06625 STKc_MEKK3_like Cataly 87.3 0.31 6.6E-06 41.1 1.4 29 224-252 108-136 (263)
192 cd05611 STKc_Rim15_like Cataly 87.2 0.31 6.8E-06 41.2 1.5 28 225-252 102-129 (260)
193 cd07841 STKc_CDK7 Catalytic do 87.2 0.3 6.4E-06 42.4 1.3 29 224-252 106-134 (298)
194 cd05039 PTKc_Csk_like Catalyti 87.2 0.23 5.1E-06 41.9 0.7 29 224-252 106-134 (256)
195 cd08223 STKc_Nek4 Catalytic do 87.2 0.28 6.1E-06 41.2 1.2 30 223-252 105-134 (257)
196 cd05606 STKc_beta_ARK Catalyti 87.1 0.3 6.4E-06 42.5 1.3 29 224-252 101-129 (278)
197 cd05059 PTKc_Tec_like Catalyti 87.1 0.29 6.2E-06 41.6 1.1 29 224-252 104-132 (256)
198 cd08220 STKc_Nek8 Catalytic do 87.0 0.32 6.9E-06 40.7 1.3 27 226-252 107-133 (256)
199 cd06637 STKc_TNIK Catalytic do 86.9 0.32 6.9E-06 41.3 1.4 28 225-252 116-143 (272)
200 cd07873 STKc_PCTAIRE1 Catalyti 86.9 0.34 7.3E-06 42.4 1.5 28 225-252 109-136 (301)
201 cd06646 STKc_MAP4K5 Catalytic 86.9 0.34 7.3E-06 41.2 1.5 29 224-252 110-138 (267)
202 cd05044 PTKc_c-ros Catalytic d 86.9 0.28 6.1E-06 41.6 1.0 29 224-252 110-138 (269)
203 cd05100 PTKc_FGFR3 Catalytic d 86.9 0.28 6.1E-06 44.0 1.0 28 226-253 140-167 (334)
204 cd05067 PTKc_Lck_Blk Catalytic 86.8 0.33 7.2E-06 41.2 1.4 29 224-252 106-134 (260)
205 cd05041 PTKc_Fes_like Catalyti 86.7 0.28 6E-06 41.2 0.8 28 225-252 98-125 (251)
206 PRK09188 serine/threonine prot 86.7 0.28 6E-06 47.3 1.0 29 224-252 115-144 (365)
207 cd05061 PTKc_InsR Catalytic do 86.7 0.3 6.5E-06 42.5 1.1 27 226-252 125-151 (288)
208 cd06659 STKc_PAK6 Catalytic do 86.7 0.34 7.4E-06 42.8 1.4 30 223-252 120-149 (297)
209 cd08529 STKc_FA2-like Catalyti 86.6 0.31 6.7E-06 40.8 1.1 28 225-252 106-133 (256)
210 cd05113 PTKc_Btk_Bmx Catalytic 86.5 0.3 6.5E-06 41.7 1.0 29 224-252 104-132 (256)
211 cd06653 STKc_MEKK3_like_1 Cata 86.5 0.36 7.7E-06 41.2 1.4 28 225-252 111-138 (264)
212 cd05148 PTKc_Srm_Brk Catalytic 86.4 0.29 6.3E-06 41.3 0.8 28 225-252 109-136 (261)
213 cd05056 PTKc_FAK Catalytic dom 86.4 0.3 6.5E-06 41.7 0.9 29 224-252 111-139 (270)
214 cd06636 STKc_MAP4K4_6 Catalyti 86.4 0.36 7.7E-06 41.5 1.4 27 226-252 127-153 (282)
215 cd06608 STKc_myosinIII_like Ca 86.4 0.41 8.8E-06 40.3 1.7 29 224-252 117-145 (275)
216 cd07840 STKc_CDK9_like Catalyt 86.3 0.37 7.9E-06 40.9 1.4 32 221-252 101-132 (287)
217 cd07850 STKc_JNK Catalytic dom 86.3 0.34 7.5E-06 43.8 1.3 28 225-252 123-150 (353)
218 cd08229 STKc_Nek7 Catalytic do 86.3 0.37 8.1E-06 40.8 1.4 28 225-252 111-138 (267)
219 cd05047 PTKc_Tie Catalytic dom 86.3 0.3 6.4E-06 42.0 0.8 29 224-252 116-144 (270)
220 cd05050 PTKc_Musk Catalytic do 86.2 0.34 7.4E-06 41.9 1.2 29 224-252 134-162 (288)
221 cd07855 STKc_ERK5 Catalytic do 86.2 0.36 7.8E-06 43.3 1.3 29 224-252 111-139 (334)
222 cd05060 PTKc_Syk_like Catalyti 86.2 0.32 6.9E-06 41.2 0.9 30 224-253 99-128 (257)
223 cd06619 PKc_MKK5 Catalytic dom 86.2 0.36 7.8E-06 41.8 1.3 28 225-252 100-127 (279)
224 cd07865 STKc_CDK9 Catalytic do 86.1 0.36 7.8E-06 41.7 1.2 29 224-252 123-151 (310)
225 cd05097 PTKc_DDR_like Catalyti 86.1 0.36 7.9E-06 42.1 1.3 28 225-252 134-161 (295)
226 cd07845 STKc_CDK10 Catalytic d 86.0 0.37 8.1E-06 42.3 1.3 30 223-252 111-140 (309)
227 cd06652 STKc_MEKK2 Catalytic d 85.9 0.4 8.7E-06 40.8 1.4 29 224-252 110-138 (265)
228 cd05070 PTKc_Fyn_Yrk Catalytic 85.9 0.35 7.6E-06 41.1 1.0 28 225-252 107-134 (260)
229 cd05580 STKc_PKA Catalytic dom 85.8 0.39 8.4E-06 41.8 1.3 28 225-252 106-133 (290)
230 cd07866 STKc_BUR1 Catalytic do 85.8 0.39 8.5E-06 41.5 1.3 29 224-252 119-147 (311)
231 cd05069 PTKc_Yes Catalytic dom 85.8 0.35 7.6E-06 41.2 1.0 28 225-252 107-134 (260)
232 cd06638 STKc_myosinIIIA Cataly 85.7 0.41 9E-06 41.1 1.4 28 225-252 129-156 (286)
233 COG0515 SPS1 Serine/threonine 85.7 0.44 9.6E-06 38.3 1.5 32 222-253 103-134 (384)
234 cd06611 STKc_SLK_like Catalyti 85.6 0.4 8.8E-06 41.1 1.3 31 222-252 105-135 (280)
235 cd05079 PTKc_Jak1_rpt2 Catalyt 85.6 0.35 7.5E-06 41.9 0.9 29 224-252 113-141 (284)
236 cd05083 PTKc_Chk Catalytic dom 85.5 0.38 8.2E-06 40.7 1.1 28 225-252 105-132 (254)
237 cd07832 STKc_CCRK Catalytic do 85.4 0.41 8.9E-06 40.9 1.2 30 223-252 102-131 (286)
238 cd07836 STKc_Pho85 Catalytic d 85.4 0.41 8.9E-06 40.9 1.3 30 223-252 103-132 (284)
239 cd06649 PKc_MEK2 Catalytic dom 85.3 0.42 9.2E-06 43.0 1.3 28 225-252 108-136 (331)
240 PTZ00024 cyclin-dependent prot 85.3 0.42 9.1E-06 42.6 1.3 30 223-252 122-151 (335)
241 cd06651 STKc_MEKK3 Catalytic d 85.3 0.45 9.8E-06 40.6 1.5 29 224-252 110-138 (266)
242 cd08228 STKc_Nek6 Catalytic do 85.3 0.47 1E-05 40.2 1.5 29 224-252 110-138 (267)
243 cd05098 PTKc_FGFR1 Catalytic d 85.2 0.43 9.3E-06 42.0 1.3 28 225-252 145-172 (307)
244 cd05033 PTKc_EphR Catalytic do 85.2 0.37 8.1E-06 41.0 0.9 29 224-252 110-138 (266)
245 cd05065 PTKc_EphR_B Catalytic 85.2 0.39 8.4E-06 41.0 1.0 29 224-252 110-138 (269)
246 cd05114 PTKc_Tec_Rlk Catalytic 85.2 0.38 8.3E-06 40.7 1.0 28 225-252 105-132 (256)
247 cd05068 PTKc_Frk_like Catalyti 85.1 0.4 8.6E-06 40.7 1.0 29 224-252 107-135 (261)
248 cd06613 STKc_MAP4K3_like Catal 85.1 0.42 9E-06 40.2 1.1 29 224-252 105-133 (262)
249 cd07835 STKc_CDK1_like Catalyt 85.0 0.47 1E-05 40.7 1.5 30 223-252 102-131 (283)
250 cd05057 PTKc_EGFR_like Catalyt 85.0 0.37 8.1E-06 41.5 0.8 29 224-252 113-141 (279)
251 PLN00009 cyclin-dependent kina 85.0 0.41 8.9E-06 41.5 1.1 29 224-252 106-134 (294)
252 cd07831 STKc_MOK Catalytic dom 84.9 0.44 9.5E-06 40.6 1.2 28 225-252 105-132 (282)
253 cd05105 PTKc_PDGFR_alpha Catal 84.9 0.46 9.9E-06 45.2 1.4 29 224-252 241-269 (400)
254 smart00219 TyrKc Tyrosine kina 84.8 0.42 9.1E-06 39.8 1.0 30 223-252 106-135 (258)
255 PHA03390 pk1 serine/threonine- 84.8 0.47 1E-05 41.1 1.3 31 222-252 111-141 (267)
256 cd05577 STKc_GRK Catalytic dom 84.8 0.51 1.1E-05 40.7 1.6 28 225-252 100-127 (277)
257 cd06627 STKc_Cdc7_like Catalyt 84.7 0.5 1.1E-05 39.2 1.4 28 225-252 104-131 (254)
258 KOG0193 Serine/threonine prote 84.7 0.32 7E-06 50.7 0.4 27 226-252 494-520 (678)
259 cd08225 STKc_Nek5 Catalytic do 84.7 0.46 1E-05 39.8 1.2 29 224-252 105-133 (257)
260 cd05071 PTKc_Src Catalytic dom 84.6 0.46 9.9E-06 40.8 1.2 29 224-252 106-134 (262)
261 cd05072 PTKc_Lyn Catalytic dom 84.6 0.46 1E-05 40.2 1.2 28 225-252 108-135 (261)
262 cd06643 STKc_SLK Catalytic dom 84.6 0.44 9.6E-06 41.1 1.1 29 224-252 107-135 (282)
263 cd06654 STKc_PAK1 Catalytic do 84.5 0.51 1.1E-05 41.6 1.5 32 221-252 117-148 (296)
264 cd06648 STKc_PAK_II Catalytic 84.4 0.48 1E-05 41.4 1.3 28 225-252 120-147 (285)
265 cd05066 PTKc_EphR_A Catalytic 84.4 0.4 8.6E-06 41.0 0.7 29 224-252 110-138 (267)
266 cd08219 STKc_Nek3 Catalytic do 84.4 0.47 1E-05 40.0 1.2 29 224-252 104-132 (255)
267 cd07854 STKc_MAPK4_6 Catalytic 84.3 0.52 1.1E-05 42.6 1.5 30 223-252 117-146 (342)
268 cd07830 STKc_MAK_like Catalyti 84.2 0.53 1.1E-05 40.3 1.4 31 222-252 101-131 (283)
269 cd07856 STKc_Sty1_Hog1 Catalyt 84.2 0.54 1.2E-05 42.4 1.5 29 224-252 112-140 (328)
270 cd07834 STKc_MAPK Catalytic do 84.2 0.54 1.2E-05 41.6 1.5 28 225-252 108-135 (330)
271 KOG4645 MAPKKK (MAP kinase kin 83.9 0.49 1.1E-05 53.1 1.3 28 225-252 1339-1366(1509)
272 cd07860 STKc_CDK2_3 Catalytic 83.9 0.53 1.2E-05 40.4 1.3 29 224-252 104-132 (284)
273 cd05085 PTKc_Fer Catalytic dom 83.9 0.48 1E-05 39.8 1.0 28 225-252 98-125 (250)
274 cd06612 STKc_MST1_2 Catalytic 83.8 0.5 1.1E-05 39.5 1.1 29 224-252 103-131 (256)
275 cd07880 STKc_p38gamma_MAPK12 C 83.8 0.56 1.2E-05 42.5 1.5 29 224-252 122-150 (343)
276 cd05099 PTKc_FGFR4 Catalytic d 83.7 0.47 1E-05 42.1 0.9 27 226-252 140-166 (314)
277 cd07879 STKc_p38delta_MAPK13 C 83.7 0.58 1.3E-05 42.3 1.5 28 225-252 122-149 (342)
278 cd08217 STKc_Nek2 Catalytic do 83.6 0.59 1.3E-05 38.9 1.4 30 223-252 108-142 (265)
279 PF14812 PBP1_TM: Transmembran 83.6 0.35 7.5E-06 38.4 0.0 9 132-140 49-57 (81)
280 KOG1164 Casein kinase (serine/ 83.6 0.56 1.2E-05 42.9 1.3 25 228-252 130-154 (322)
281 cd07852 STKc_MAPK15 Catalytic 83.5 0.51 1.1E-05 42.2 1.1 28 225-252 112-139 (337)
282 cd07858 STKc_TEY_MAPK_plant Ca 83.4 0.6 1.3E-05 42.0 1.5 30 223-252 111-140 (337)
283 cd06628 STKc_MAPKKK_Byr2_like 83.4 0.62 1.3E-05 39.5 1.5 29 224-252 110-138 (267)
284 cd08221 STKc_Nek9 Catalytic do 83.4 0.6 1.3E-05 39.3 1.4 29 224-252 105-133 (256)
285 cd05572 STKc_cGK_PKG Catalytic 83.4 0.61 1.3E-05 39.5 1.4 28 225-252 98-125 (262)
286 cd06617 PKc_MKK3_6 Catalytic d 83.3 0.63 1.4E-05 39.8 1.5 29 224-252 107-136 (283)
287 cd05087 PTKc_Aatyk1_Aatyk3 Cat 83.1 0.53 1.2E-05 40.3 1.0 28 225-252 105-132 (269)
288 PTZ00415 transmission-blocking 83.0 0.6 1.3E-05 53.8 1.5 15 126-140 171-185 (2849)
289 cd06626 STKc_MEKK4 Catalytic d 83.0 0.63 1.4E-05 39.1 1.4 28 225-252 104-131 (264)
290 cd06639 STKc_myosinIIIB Cataly 83.0 0.6 1.3E-05 40.4 1.3 28 225-252 133-160 (291)
291 cd05112 PTKc_Itk Catalytic dom 82.9 0.58 1.3E-05 39.4 1.1 29 224-252 104-132 (256)
292 cd07877 STKc_p38alpha_MAPK14 C 82.9 0.58 1.3E-05 42.4 1.2 28 225-252 125-152 (345)
293 cd05034 PTKc_Src_like Catalyti 82.9 0.61 1.3E-05 39.4 1.2 29 224-252 107-135 (261)
294 cd05107 PTKc_PDGFR_beta Cataly 82.8 0.6 1.3E-05 44.5 1.3 28 225-252 244-271 (401)
295 cd06917 STKc_NAK1_like Catalyt 82.7 0.66 1.4E-05 39.6 1.4 28 225-252 106-133 (277)
296 cd05578 STKc_Yank1 Catalytic d 82.6 0.66 1.4E-05 39.2 1.3 29 224-252 104-132 (258)
297 cd07846 STKc_CDKL2_3 Catalytic 82.6 0.64 1.4E-05 39.8 1.3 29 224-252 104-132 (286)
298 cd06632 STKc_MEKK1_plant Catal 82.6 0.66 1.4E-05 38.7 1.3 28 225-252 107-134 (258)
299 KOG4721 Serine/threonine prote 82.5 0.37 8.1E-06 50.7 -0.2 30 223-252 215-244 (904)
300 cd08224 STKc_Nek6_Nek7 Catalyt 82.4 0.67 1.5E-05 39.0 1.3 29 224-252 110-138 (267)
301 PRK01723 3-deoxy-D-manno-octul 82.4 0.66 1.4E-05 41.4 1.3 28 225-252 147-174 (239)
302 cd07838 STKc_CDK4_6_like Catal 82.3 0.66 1.4E-05 39.5 1.2 30 223-252 110-139 (287)
303 cd07829 STKc_CDK_like Catalyti 82.3 0.64 1.4E-05 39.5 1.1 29 224-252 102-130 (282)
304 cd06622 PKc_MAPKK_PBS2_like Ca 82.2 0.61 1.3E-05 40.2 1.0 29 224-252 106-135 (286)
305 cd05122 PKc_STE Catalytic doma 82.1 0.75 1.6E-05 37.7 1.4 28 225-252 103-130 (253)
306 cd05073 PTKc_Hck Catalytic dom 82.0 0.63 1.4E-05 39.6 1.0 29 224-252 106-134 (260)
307 cd05063 PTKc_EphR_A2 Catalytic 82.0 0.58 1.3E-05 39.8 0.8 30 223-252 110-139 (268)
308 cd07864 STKc_CDK12 Catalytic d 81.9 0.71 1.5E-05 40.0 1.3 31 222-252 118-148 (302)
309 cd05609 STKc_MAST Catalytic do 81.9 0.7 1.5E-05 40.6 1.3 27 226-252 107-133 (305)
310 cd06631 STKc_YSK4 Catalytic do 81.8 0.73 1.6E-05 39.1 1.3 30 224-253 106-135 (265)
311 cd06635 STKc_TAO1 Catalytic do 81.6 0.69 1.5E-05 41.1 1.2 28 225-252 130-157 (317)
312 cd06607 STKc_TAO Catalytic dom 81.6 0.68 1.5E-05 40.8 1.1 29 224-252 119-147 (307)
313 cd06657 STKc_PAK4 Catalytic do 81.5 0.75 1.6E-05 40.6 1.4 29 224-252 120-148 (292)
314 cd05574 STKc_phototropin_like 81.5 0.69 1.5E-05 40.7 1.1 27 226-252 109-135 (316)
315 cd06609 STKc_MST3_like Catalyt 81.3 0.81 1.8E-05 39.1 1.5 30 223-252 101-130 (274)
316 cd05144 RIO2_C RIO kinase fami 81.1 0.77 1.7E-05 38.6 1.2 31 222-252 127-157 (198)
317 cd06629 STKc_MAPKKK_Bck1_like 81.1 0.79 1.7E-05 39.1 1.3 27 226-252 114-140 (272)
318 cd06656 STKc_PAK3 Catalytic do 80.9 0.82 1.8E-05 40.3 1.4 30 223-252 118-147 (297)
319 PTZ00415 transmission-blocking 80.9 0.85 1.8E-05 52.6 1.7 6 48-53 95-100 (2849)
320 KOG0593 Predicted protein kina 80.7 0.8 1.7E-05 45.0 1.3 29 224-252 105-133 (396)
321 KOG0583 Serine/threonine prote 80.5 0.8 1.7E-05 43.9 1.2 26 227-252 127-152 (370)
322 cd05613 STKc_MSK1_N N-terminal 80.4 0.83 1.8E-05 39.6 1.2 27 227-253 112-138 (290)
323 cd06610 STKc_OSR1_SPAK Catalyt 80.3 0.86 1.9E-05 38.2 1.3 29 224-252 106-134 (267)
324 KOG1832 HIV-1 Vpr-binding prot 80.3 0.8 1.7E-05 50.1 1.3 14 41-54 1358-1371(1516)
325 cd07833 STKc_CDKL Catalytic do 80.1 0.91 2E-05 38.8 1.3 29 224-252 104-132 (288)
326 KOG0595 Serine/threonine-prote 79.9 0.8 1.7E-05 45.8 1.1 29 224-252 113-141 (429)
327 TIGR03724 arch_bud32 Kae1-asso 79.8 0.87 1.9E-05 37.7 1.1 29 224-252 94-122 (199)
328 cd06606 STKc_MAPKKK Catalytic 79.7 0.98 2.1E-05 37.2 1.4 30 223-252 104-133 (260)
329 KOG0663 Protein kinase PITSLRE 79.6 0.85 1.8E-05 45.2 1.1 34 219-252 176-209 (419)
330 smart00090 RIO RIO-like kinase 79.5 0.95 2E-05 40.4 1.3 30 223-252 151-181 (237)
331 cd06644 STKc_STK10_LOK Catalyt 79.3 0.87 1.9E-05 39.6 1.0 30 223-252 113-142 (292)
332 PRK12274 serine/threonine prot 79.3 0.87 1.9E-05 41.6 1.0 28 225-252 96-124 (218)
333 PLN03224 probable serine/threo 79.1 0.93 2E-05 45.6 1.3 28 225-252 314-341 (507)
334 KOG0584 Serine/threonine prote 79.1 0.9 2E-05 47.3 1.2 30 223-252 146-177 (632)
335 cd06655 STKc_PAK2 Catalytic do 79.0 1 2.3E-05 39.7 1.4 30 223-252 118-147 (296)
336 PRK09605 bifunctional UGMP fam 79.0 0.99 2.1E-05 44.6 1.4 28 225-252 433-460 (535)
337 cd06634 STKc_TAO2 Catalytic do 78.8 1 2.3E-05 39.8 1.3 28 225-252 120-147 (308)
338 cd06650 PKc_MEK1 Catalytic dom 78.7 1 2.2E-05 40.7 1.3 30 224-253 107-137 (333)
339 cd07851 STKc_p38 Catalytic dom 78.7 1.1 2.4E-05 40.5 1.5 30 223-252 121-150 (343)
340 cd08222 STKc_Nek11 Catalytic d 78.6 1.1 2.4E-05 37.9 1.4 30 223-252 109-138 (260)
341 cd06633 STKc_TAO3 Catalytic do 78.5 1 2.3E-05 40.0 1.2 28 225-252 126-153 (313)
342 KOG0669 Cyclin T-dependent kin 78.4 0.69 1.5E-05 44.7 0.1 31 227-257 131-165 (376)
343 cd08530 STKc_CNK2-like Catalyt 78.3 1.1 2.3E-05 37.4 1.2 29 224-252 107-135 (256)
344 cd05583 STKc_MSK_N N-terminal 78.2 1.1 2.4E-05 38.7 1.3 27 226-252 111-137 (288)
345 PF07714 Pkinase_Tyr: Protein 78.1 1.1 2.4E-05 38.7 1.2 30 223-252 106-135 (259)
346 KOG0603 Ribosomal protein S6 k 78.0 0.44 9.5E-06 49.5 -1.4 28 226-253 421-448 (612)
347 cd06605 PKc_MAPKK Catalytic do 78.0 1.3 2.8E-05 37.3 1.7 28 225-252 105-133 (265)
348 PRK14879 serine/threonine prot 78.0 1.1 2.4E-05 37.3 1.2 28 225-252 100-127 (211)
349 cd08215 STKc_Nek Catalytic dom 77.8 1.2 2.5E-05 36.9 1.3 30 223-252 106-135 (258)
350 cd06640 STKc_MST4 Catalytic do 77.8 1.2 2.7E-05 38.3 1.5 30 223-252 104-133 (277)
351 cd06642 STKc_STK25-YSK1 Cataly 77.7 1.1 2.5E-05 38.4 1.3 29 224-252 105-133 (277)
352 KOG0580 Serine/threonine prote 77.7 1.5 3.2E-05 41.7 2.0 32 224-255 128-159 (281)
353 PRK13184 pknD serine/threonine 77.6 0.98 2.1E-05 48.9 1.0 28 225-252 118-145 (932)
354 cd05119 RIO RIO kinase family, 77.6 1.3 2.8E-05 36.2 1.4 33 220-252 114-147 (187)
355 KOG0576 Mitogen-activated prot 77.4 0.81 1.8E-05 48.6 0.3 26 227-252 119-144 (829)
356 cd06616 PKc_MKK4 Catalytic dom 77.4 1.1 2.4E-05 38.6 1.1 29 224-252 111-140 (288)
357 KOG0984 Mitogen-activated prot 77.2 0.79 1.7E-05 43.2 0.1 26 227-252 155-181 (282)
358 KOG1832 HIV-1 Vpr-binding prot 77.1 1.5 3.3E-05 48.1 2.2 6 97-102 1404-1409(1516)
359 cd06623 PKc_MAPKK_plant_like C 77.1 1.3 2.9E-05 37.0 1.4 29 224-252 103-132 (264)
360 KOG0667 Dual-specificity tyros 77.0 1.2 2.6E-05 46.2 1.3 29 224-252 293-321 (586)
361 cd06615 PKc_MEK Catalytic doma 77.0 1.2 2.6E-05 39.5 1.2 29 224-252 103-132 (308)
362 KOG0582 Ste20-like serine/thre 76.8 1.1 2.4E-05 45.6 1.0 26 227-252 133-158 (516)
363 cd05581 STKc_PDK1 Catalytic do 76.3 1.4 3.1E-05 37.2 1.4 30 223-252 105-134 (280)
364 cd08218 STKc_Nek1 Catalytic do 76.0 1.3 2.8E-05 37.3 1.1 28 225-252 106-133 (256)
365 cd00180 PKc Catalytic domain o 76.0 1.4 3.1E-05 34.2 1.3 29 224-252 96-124 (215)
366 cd06621 PKc_MAPKK_Pek1_like Ca 75.7 1.5 3.2E-05 38.2 1.4 28 225-252 110-137 (287)
367 cd05123 STKc_AGC Catalytic dom 75.3 1.3 2.9E-05 36.8 1.0 29 224-252 97-125 (250)
368 KOG1167 Serine/threonine prote 75.3 1.5 3.3E-05 43.7 1.5 30 224-253 136-165 (418)
369 KOG0197 Tyrosine kinases [Sign 74.2 1.4 3.1E-05 44.5 1.1 42 217-258 300-345 (468)
370 KOG0599 Phosphorylase kinase g 73.9 1.4 3.1E-05 43.0 0.9 31 224-254 127-157 (411)
371 cd06618 PKc_MKK7 Catalytic dom 73.9 1.6 3.5E-05 38.1 1.2 29 224-252 118-147 (296)
372 cd06614 STKc_PAK Catalytic dom 73.8 1.6 3.5E-05 37.7 1.1 32 221-252 117-148 (286)
373 KOG0032 Ca2+/calmodulin-depend 73.7 1.7 3.8E-05 42.0 1.5 35 219-253 134-168 (382)
374 KOG0589 Serine/threonine prote 73.7 1.7 3.7E-05 43.4 1.4 28 225-252 111-138 (426)
375 PF03153 TFIIA: Transcription 73.4 1.3 2.9E-05 41.9 0.6 7 130-136 329-335 (375)
376 KOG0616 cAMP-dependent protein 72.9 1.9 4.1E-05 42.2 1.4 27 226-252 150-176 (355)
377 KOG0194 Protein tyrosine kinas 72.7 1.7 3.7E-05 43.9 1.1 29 224-252 266-294 (474)
378 cd06647 STKc_PAK_I Catalytic d 72.6 1.8 3.9E-05 38.0 1.2 29 224-252 119-147 (293)
379 cd08528 STKc_Nek10 Catalytic d 72.4 1.9 4.1E-05 36.7 1.2 28 225-252 118-146 (269)
380 KOG2345 Serine/threonine prote 71.8 1.7 3.7E-05 41.6 0.9 25 228-252 135-161 (302)
381 KOG0607 MAP kinase-interacting 71.7 1.2 2.6E-05 44.3 -0.2 27 227-253 183-209 (463)
382 cd06641 STKc_MST3 Catalytic do 71.3 2.3 4.9E-05 36.7 1.5 30 223-252 104-133 (277)
383 PTZ00266 NIMA-related protein 71.1 2.1 4.6E-05 46.9 1.5 28 225-252 123-157 (1021)
384 KOG0665 Jun-N-terminal kinase 70.6 1.9 4.1E-05 42.4 0.9 29 224-252 122-150 (369)
385 smart00220 S_TKc Serine/Threon 70.6 2.3 5E-05 34.4 1.3 30 223-252 90-119 (244)
386 PLN02400 cellulose synthase 70.3 4.4 9.6E-05 44.8 3.6 30 45-74 38-71 (1085)
387 KOG0591 NIMA (never in mitosis 69.6 2.3 5E-05 41.6 1.2 26 227-252 131-160 (375)
388 PLN02189 cellulose synthase 69.1 5.2 0.00011 44.1 3.9 30 45-74 36-69 (1040)
389 PF04147 Nop14: Nop14-like fam 68.8 4 8.7E-05 43.6 2.9 7 167-173 446-452 (840)
390 PRK10359 lipopolysaccharide co 67.1 2.8 6E-05 38.4 1.2 27 226-252 141-167 (232)
391 PF03115 Astro_capsid: Astrovi 66.8 1.9 4E-05 46.2 0.0 6 133-138 719-724 (787)
392 PHA02988 hypothetical protein; 66.0 3 6.6E-05 36.7 1.2 30 223-252 125-155 (283)
393 KOG3540 Beta amyloid precursor 65.9 5.1 0.00011 41.3 2.9 11 46-56 143-153 (615)
394 KOG0986 G protein-coupled rece 63.9 3.4 7.4E-05 42.5 1.2 29 224-252 291-319 (591)
395 KOG0661 MAPK related serine/th 62.6 2 4.3E-05 44.0 -0.7 26 227-252 117-142 (538)
396 KOG0033 Ca2+/calmodulin-depend 62.1 4.3 9.4E-05 39.2 1.5 28 225-252 115-142 (355)
397 PF04889 Cwf_Cwc_15: Cwf15/Cwc 61.5 5.1 0.00011 37.1 1.8 11 165-175 197-208 (244)
398 cd06620 PKc_MAPKK_Byr1_like Ca 61.1 4.4 9.6E-05 35.0 1.3 29 224-252 107-136 (284)
399 KOG0983 Mitogen-activated prot 60.9 3.9 8.4E-05 40.1 1.0 27 226-252 197-224 (391)
400 smart00221 STYKc Protein kinas 60.8 4.9 0.00011 32.4 1.4 31 222-252 100-130 (225)
401 KOG1166 Mitotic checkpoint ser 60.0 4.3 9.3E-05 44.5 1.2 37 216-252 790-826 (974)
402 KOG0577 Serine/threonine prote 59.7 3.3 7.1E-05 44.1 0.3 30 228-257 134-167 (948)
403 KOG1027 Serine/threonine prote 59.6 3.8 8.3E-05 44.4 0.7 31 223-253 609-639 (903)
404 PLN00113 leucine-rich repeat r 59.2 5.2 0.00011 41.6 1.6 28 225-252 785-815 (968)
405 KOG4250 TANK binding protein k 58.0 4.7 0.0001 42.9 1.1 36 217-252 113-152 (732)
406 PLN02436 cellulose synthase A 57.9 11 0.00024 41.9 3.8 30 45-74 38-71 (1094)
407 KOG3130 Uncharacterized conser 56.9 8.7 0.00019 38.9 2.7 7 167-173 339-345 (514)
408 KOG1006 Mitogen-activated prot 56.3 3 6.6E-05 40.6 -0.6 26 227-252 174-200 (361)
409 KOG1152 Signal transduction se 56.1 4.8 0.0001 42.6 0.8 32 220-251 670-701 (772)
410 KOG0699 Serine/threonine prote 56.1 7.5 0.00016 39.2 2.1 22 117-138 295-316 (542)
411 cd05151 ChoK Choline Kinase (C 55.1 6.8 0.00015 31.2 1.3 28 225-252 88-120 (170)
412 cd05120 APH_ChoK_like Aminogly 54.9 6.3 0.00014 29.4 1.1 29 224-252 90-121 (155)
413 PRK14559 putative protein seri 54.7 11 0.00024 39.5 3.2 51 1-68 1-51 (645)
414 KOG3130 Uncharacterized conser 53.9 7.3 0.00016 39.4 1.6 6 133-138 304-309 (514)
415 PF03153 TFIIA: Transcription 52.8 4.6 9.9E-05 38.4 0.0 7 96-102 273-279 (375)
416 KOG1999 RNA polymerase II tran 51.9 11 0.00023 41.6 2.6 12 205-216 162-173 (1024)
417 PTZ00007 (NAP-L) nucleosome as 50.0 14 0.0003 36.0 2.8 13 85-97 271-283 (337)
418 KOG2140 Uncharacterized conser 48.8 12 0.00027 39.2 2.4 26 115-140 423-448 (739)
419 KOG3241 Uncharacterized conser 48.0 14 0.00031 33.8 2.4 10 46-55 45-54 (227)
420 PF04546 Sigma70_ner: Sigma-70 47.3 10 0.00023 33.5 1.4 7 249-255 148-154 (211)
421 PF12773 DZR: Double zinc ribb 46.8 23 0.00049 24.2 2.7 40 18-64 10-49 (50)
422 KOG1345 Serine/threonine kinas 45.9 9.3 0.0002 37.4 0.9 27 226-252 127-153 (378)
423 KOG0605 NDR and related serine 45.6 11 0.00024 39.1 1.4 27 226-252 247-273 (550)
424 KOG4236 Serine/threonine prote 45.5 11 0.00023 40.1 1.3 26 227-252 671-696 (888)
425 KOG3540 Beta amyloid precursor 44.7 16 0.00035 37.8 2.4 11 83-93 180-190 (615)
426 KOG0586 Serine/threonine prote 44.0 12 0.00027 39.1 1.5 27 226-252 161-187 (596)
427 KOG1163 Casein kinase (serine/ 43.7 11 0.00024 36.5 1.0 26 227-252 118-143 (341)
428 PF06293 Kdo: Lipopolysacchari 43.2 12 0.00027 32.3 1.2 30 223-252 121-150 (206)
429 PF14569 zf-UDP: Zinc-binding 42.6 23 0.00049 28.3 2.4 36 39-74 5-44 (80)
430 KOG0200 Fibroblast/platelet-de 41.5 13 0.00027 38.0 1.1 32 221-252 419-450 (609)
431 KOG1290 Serine/threonine prote 41.0 13 0.00027 38.7 1.0 27 226-252 193-220 (590)
432 cd05146 RIO3_euk RIO kinase fa 40.6 15 0.00032 32.7 1.3 27 226-252 130-157 (197)
433 KOG1991 Nuclear transport rece 39.8 18 0.0004 39.9 2.0 43 88-130 892-952 (1010)
434 PTZ00429 beta-adaptin; Provisi 39.2 21 0.00045 38.1 2.3 17 126-142 613-629 (746)
435 KOG0610 Putative serine/threon 38.5 12 0.00025 38.1 0.3 27 226-252 185-211 (459)
436 KOG3241 Uncharacterized conser 38.4 23 0.0005 32.5 2.2 8 20-27 93-100 (227)
437 KOG0574 STE20-like serine/thre 38.1 9 0.00019 38.1 -0.5 30 229-258 138-171 (502)
438 KOG1151 Tousled-like protein k 38.0 9.5 0.00021 39.7 -0.4 35 218-252 566-602 (775)
439 KOG1980 Uncharacterized conser 36.1 17 0.00037 38.7 1.1 20 79-99 360-379 (754)
440 KOG0668 Casein kinase II, alph 35.8 20 0.00044 34.5 1.5 28 225-252 137-164 (338)
441 KOG0597 Serine-threonine prote 35.6 17 0.00038 38.6 1.1 27 226-252 106-132 (808)
442 KOG0772 Uncharacterized conser 34.7 31 0.00067 36.1 2.6 7 134-140 153-159 (641)
443 KOG0587 Traf2- and Nck-interac 34.6 17 0.00036 39.9 0.8 26 227-252 130-155 (953)
444 PF03660 PHF5: PHF5-like prote 34.6 17 0.00038 30.3 0.7 52 20-74 20-78 (106)
445 PRK15123 lipopolysaccharide co 34.2 21 0.00046 32.9 1.3 26 227-252 145-170 (268)
446 KOG4158 BRPK/PTEN-induced prot 34.1 17 0.00038 37.3 0.8 26 227-252 348-373 (598)
447 KOG0671 LAMMER dual specificit 33.5 20 0.00044 36.0 1.1 27 226-252 198-224 (415)
448 PF14531 Kinase-like: Kinase-l 32.9 22 0.00048 33.7 1.2 28 225-252 150-177 (288)
449 KOG2038 CAATT-binding transcri 32.8 24 0.00052 38.5 1.5 11 13-23 697-707 (988)
450 PF05764 YL1: YL1 nuclear prot 32.6 42 0.00091 30.7 2.9 6 225-230 145-150 (240)
451 KOG0262 RNA polymerase I, larg 32.6 45 0.00097 38.3 3.6 104 80-184 1320-1440(1640)
452 PRK14873 primosome assembly pr 32.4 31 0.00067 36.2 2.3 38 10-52 381-419 (665)
453 PLN02638 cellulose synthase A 31.6 46 0.00099 37.3 3.4 36 39-74 13-52 (1079)
454 KOG2807 RNA polymerase II tran 31.4 23 0.00049 35.1 1.1 67 10-76 274-364 (378)
455 cd02335 ZZ_ADA2 Zinc finger, Z 31.4 50 0.0011 23.1 2.5 32 45-76 2-34 (49)
456 cd02340 ZZ_NBR1_like Zinc fing 31.4 43 0.00093 23.1 2.2 31 45-76 2-33 (43)
457 KOG0604 MAP kinase-activated p 30.9 26 0.00056 34.8 1.3 26 227-252 168-193 (400)
458 PF09073 BUD22: BUD22; InterP 30.1 72 0.0016 31.5 4.3 71 93-163 177-259 (432)
459 cd02341 ZZ_ZZZ3 Zinc finger, Z 29.9 47 0.001 23.6 2.2 41 46-86 3-48 (48)
460 cd02249 ZZ Zinc finger, ZZ typ 29.9 51 0.0011 22.5 2.3 44 44-89 1-46 (46)
461 KOG1834 Calsyntenin [Extracell 29.7 32 0.0007 37.1 1.9 40 98-137 892-931 (952)
462 PF04438 zf-HIT: HIT zinc fing 29.1 23 0.00049 23.0 0.4 24 42-69 1-24 (30)
463 KOG0127 Nucleolar protein fibr 28.9 27 0.00059 36.7 1.2 32 101-132 215-246 (678)
464 KOG4672 Uncharacterized conser 28.8 92 0.002 31.9 4.7 68 88-155 231-314 (487)
465 KOG2141 Protein involved in hi 28.7 50 0.0011 35.7 3.1 75 98-172 237-320 (822)
466 KOG4364 Chromatin assembly fac 28.7 53 0.0012 35.3 3.2 55 82-137 507-561 (811)
467 KOG1025 Epidermal growth facto 28.5 26 0.00057 38.8 1.0 27 226-252 804-830 (1177)
468 KOG1824 TATA-binding protein-i 28.1 26 0.00057 39.0 0.9 26 101-126 316-343 (1233)
469 KOG0590 Checkpoint kinase and 27.7 25 0.00054 36.3 0.7 25 228-252 428-452 (601)
470 PF09538 FYDLN_acid: Protein o 27.6 1.1E+02 0.0024 25.2 4.3 83 47-132 10-93 (108)
471 PF15449 Retinal: Retinal prot 27.0 61 0.0013 36.6 3.4 58 110-173 483-540 (1287)
472 PHA02811 putative host range p 26.9 39 0.00085 30.9 1.7 29 101-129 169-197 (197)
473 KOG2652 RNA polymerase II tran 26.4 49 0.0011 32.7 2.4 42 91-132 255-298 (348)
474 KOG0127 Nucleolar protein fibr 26.3 36 0.00078 35.9 1.5 40 96-135 224-265 (678)
475 PF12253 CAF1A: Chromatin asse 26.1 77 0.0017 24.8 3.0 47 83-129 29-76 (77)
476 PF07975 C1_4: TFIIH C1-like d 25.9 37 0.00079 24.8 1.1 31 46-76 2-40 (51)
477 KOG2652 RNA polymerase II tran 25.4 64 0.0014 31.9 2.9 51 86-136 253-308 (348)
478 PF15243 ANAPC15: Anaphase-pro 25.2 41 0.00088 27.3 1.3 28 105-132 63-90 (92)
479 PF14951 DUF4503: Domain of un 25.0 52 0.0011 32.9 2.2 54 2-59 275-329 (389)
480 TIGR00595 priA primosomal prot 24.9 55 0.0012 33.0 2.5 47 12-65 213-260 (505)
481 PF05320 Pox_RNA_Pol_19: Poxvi 24.9 21 0.00044 31.9 -0.4 30 103-132 2-31 (167)
482 KOG0262 RNA polymerase I, larg 24.3 65 0.0014 37.1 3.1 52 84-135 1316-1385(1640)
483 KOG4257 Focal adhesion tyrosin 24.2 30 0.00065 37.4 0.5 25 228-252 499-523 (974)
484 KOG0694 Serine/threonine prote 24.2 36 0.00079 36.3 1.1 27 226-252 474-500 (694)
485 KOG1240 Protein kinase contain 24.0 34 0.00073 39.0 0.8 25 228-252 128-152 (1431)
486 KOG1834 Calsyntenin [Extracell 23.9 52 0.0011 35.6 2.2 44 85-129 883-926 (952)
487 PF03896 TRAP_alpha: Transloco 23.7 63 0.0014 30.8 2.5 50 105-154 33-82 (285)
488 KOG2141 Protein involved in hi 23.6 76 0.0016 34.5 3.3 63 91-153 222-286 (822)
489 smart00750 KIND kinase non-cat 23.4 42 0.00091 26.8 1.1 37 227-263 24-64 (176)
490 KOG2773 Apoptosis antagonizing 22.9 47 0.001 34.0 1.6 38 96-133 79-116 (483)
491 KOG1991 Nuclear transport rece 22.8 50 0.0011 36.7 1.8 43 89-131 888-950 (1010)
492 PLN02915 cellulose synthase A 22.8 71 0.0015 35.8 3.0 71 45-118 17-92 (1044)
493 KOG1989 ARK protein kinase fam 22.7 41 0.00088 36.2 1.2 26 227-252 151-178 (738)
494 KOG3653 Transforming growth fa 22.5 40 0.00086 35.0 1.0 24 229-252 316-348 (534)
495 KOG2023 Nuclear transport rece 22.4 45 0.00098 36.1 1.4 20 98-117 345-364 (885)
496 KOG0614 cGMP-dependent protein 22.4 40 0.00086 35.7 1.0 24 229-252 529-552 (732)
497 cd02342 ZZ_UBA_plant Zinc fing 22.3 58 0.0013 23.2 1.5 24 3-26 2-30 (43)
498 PHA03346 US22 family homolog; 22.3 77 0.0017 32.8 3.0 49 90-138 395-461 (520)
499 PF01056 Myc_N: Myc amino-term 22.1 30 0.00064 33.7 0.0 27 110-136 221-247 (329)
500 KOG2675 Adenylate cyclase-asso 22.0 79 0.0017 32.4 2.9 33 136-168 228-267 (480)
No 1
>cd00021 BBOX B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
Probab=97.38 E-value=0.00013 Score=47.35 Aligned_cols=38 Identities=45% Similarity=0.840 Sum_probs=33.2
Q ss_pred CCCCCCCC-CceEEecCCCcccccccCcccccccccCCccccccc
Q 024658 2 RKCELCEC-PARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLL 45 (264)
Q Consensus 2 ~~Cd~C~~-pA~vyC~aD~A~LC~~CDa~VHsAN~La~rH~RvpL 45 (264)
..|..++. ++.+||..|++.+|..|+...|. .|.+++|
T Consensus 1 ~~C~~H~~~~~~~fC~~~~~~iC~~C~~~~H~------~H~~~~i 39 (39)
T cd00021 1 RLCDEHGEEPLSLFCETDRALLCVDCDLSVHS------GHRRVPL 39 (39)
T ss_pred CCCCccCCcceEEEeCccChhhhhhcChhhcC------CCCEeeC
Confidence 36899988 99999999999999999988875 5888775
No 2
>smart00336 BBOX B-Box-type zinc finger.
Probab=96.77 E-value=0.0012 Score=43.29 Aligned_cols=39 Identities=41% Similarity=0.698 Sum_probs=32.6
Q ss_pred CCCCCCCCC-CceEEecCCCcccccccCcccccccccCCccccccc
Q 024658 1 MRKCELCEC-PARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLL 45 (264)
Q Consensus 1 m~~Cd~C~~-pA~vyC~aD~A~LC~~CDa~VHsAN~La~rH~RvpL 45 (264)
++.|..+.. ++.+||..+.+.+|..|....| +.|.+++|
T Consensus 3 ~~~C~~h~~~~~~~~C~~c~~~iC~~C~~~~H------~~H~~~~l 42 (42)
T smart00336 3 PPKCDSHGDEPAEFFCEECGALLCRTCDEAEH------RGHTVVLL 42 (42)
T ss_pred CCcCCCCCCCceEEECCCCCcccccccChhhc------CCCceecC
Confidence 367999996 9999999999999999998866 35777664
No 3
>PF00643 zf-B_box: B-box zinc finger; InterPro: IPR000315 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents B-box-type zinc finger domains, which are around 40 residues in length. B-box zinc fingers can be divided into two groups, where types 1 and 2 B-box domains differ in their consensus sequence and in the spacing of the 7-8 zinc-binding residues. Several proteins contain both types 1 and 2 B-boxes, suggesting some level of cooperativity between these two domains. B-box domains are found in over 1500 proteins from a variety of organisms. They are found in TRIM (tripartite motif) proteins that consist of an N-terminal RING finger (originally called an A-box), followed by 1-2 B-box domains and a coiled-coil domain (also called RBCC for Ring, B-box, Coiled-Coil). TRIM proteins contain a type 2 B-box domain, and may also contain a type 1 B-box. In proteins that do not contain RING or coiled-coil domains, the B-box domain is primarily type 2. Many type 2 B-box proteins are involved in ubiquitinylation. Proteins containing a B-box zinc finger domain include transcription factors, ribonucleoproteins and proto-oncoproteins; for example, MID1, MID2, TRIM9, TNL, TRIM36, TRIM63, TRIFIC, NCL1 and CONSTANS-like proteins []. The microtubule-associated E3 ligase MID1 (6.3.2 from EC) contains a type 1 B-box zinc finger domain. MID1 specifically binds Alpha-4, which in turn recruits the catalytic subunit of phosphatase 2A (PP2Ac). This complex is required for targeting of PP2Ac for proteasome-mediated degradation. The MID1 B-box coordinates two zinc ions and adopts a beta/beta/alpha cross-brace structure similar to that of ZZ, PHD, RING and FYVE zinc fingers [, ]. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 3DDT_B 2D8U_A 3Q1D_A 2EGM_A 2YVR_B 2DJA_A 2DQ5_A 2JUN_A 2YRG_A 2DID_A ....
Probab=96.47 E-value=0.0014 Score=43.78 Aligned_cols=39 Identities=26% Similarity=0.499 Sum_probs=33.2
Q ss_pred CCCCCCCCC-CceEEecCCCcccccccCcccccccccCCccccccc
Q 024658 1 MRKCELCEC-PARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLL 45 (264)
Q Consensus 1 m~~Cd~C~~-pA~vyC~aD~A~LC~~CDa~VHsAN~La~rH~RvpL 45 (264)
++.|..+.. ++.+||..+...||..|....|.. |..++|
T Consensus 3 ~~~C~~H~~~~~~~~C~~C~~~~C~~C~~~~H~~------H~~~~i 42 (42)
T PF00643_consen 3 EPKCPEHPEEPLSLFCEDCNEPLCSECTVSGHKG------HKIVPI 42 (42)
T ss_dssp SSB-SSTTTSBEEEEETTTTEEEEHHHHHTSTTT------SEEEEC
T ss_pred CccCccCCccceEEEecCCCCccCccCCCCCCCC------CEEeEC
Confidence 578999999 699999999999999999999865 777664
No 4
>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues. The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus
Probab=96.28 E-value=0.0034 Score=59.27 Aligned_cols=12 Identities=75% Similarity=1.249 Sum_probs=4.7
Q ss_pred CCCCCCCCCCCC
Q 024658 111 DEDDDDDDDEDP 122 (264)
Q Consensus 111 ded~~~dd~e~e 122 (264)
|+|+|||+||++
T Consensus 279 d~d~d~d~eed~ 290 (314)
T PF06524_consen 279 DEDDDEDDEEDE 290 (314)
T ss_pred cccccccccccc
Confidence 344444443333
No 5
>KOG4367 consensus Predicted Zn-finger protein [Function unknown]
Probab=96.24 E-value=0.0012 Score=66.17 Aligned_cols=74 Identities=26% Similarity=0.385 Sum_probs=64.3
Q ss_pred CCCCCCC---CceEEecCCCcccccccCcccccccccCCcccccccc-------------cccccCCCCceecccCCCCc
Q 024658 3 KCELCEC---PARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLC-------------HVCQSLTPWKASGPKLGPTV 66 (264)
Q Consensus 3 ~Cd~C~~---pA~vyC~aD~A~LC~~CDa~VHsAN~La~rH~RvpLC-------------~~C~~~p~~ka~~~C~~d~~ 66 (264)
.|.+|++ .|.|+|+....+.|.-|..+.|-+--.+++|.-+|-. ..|-.|+...-.+||..|.+
T Consensus 164 kcqlce~a~k~a~v~ceqcdv~yc~pc~~~~hp~rgplakh~l~~~~~grvs~~~s~r~~~~ct~h~~e~~smyc~~ck~ 243 (699)
T KOG4367|consen 164 KCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKM 243 (699)
T ss_pred hhhhhcCChhhhhhhHhhCceEEechHHhccCCCCCchhhcccCCcccCceeeccchhhhhhccCCCCCCceEEEEecCC
Confidence 6999998 4999999999999999999999877778888655542 47888998889999999999
Q ss_pred ccCchhhhcc
Q 024658 67 SVCDACVAAA 76 (264)
Q Consensus 67 ~LC~~Cd~~~ 76 (264)
++|-.|--.+
T Consensus 244 pvc~~clee~ 253 (699)
T KOG4367|consen 244 PVCYQCLEEG 253 (699)
T ss_pred hHHHHHHHhh
Confidence 9999998754
No 6
>cd00021 BBOX B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
Probab=96.18 E-value=0.0027 Score=41.11 Aligned_cols=37 Identities=11% Similarity=-0.017 Sum_probs=28.7
Q ss_pred cccCCCCceecccCCCCcccCchhhhcccCCCCCCccc
Q 024658 49 CQSLTPWKASGPKLGPTVSVCDACVAAARCGVNDDDKA 86 (264)
Q Consensus 49 C~~~p~~ka~~~C~~d~~~LC~~Cd~~~n~~~H~r~pV 86 (264)
|+.|+...+.+||..|.+.||..|...+ -.+|.++||
T Consensus 3 C~~H~~~~~~~fC~~~~~~iC~~C~~~~-H~~H~~~~i 39 (39)
T cd00021 3 CDEHGEEPLSLFCETDRALLCVDCDLSV-HSGHRRVPL 39 (39)
T ss_pred CCccCCcceEEEeCccChhhhhhcChhh-cCCCCEeeC
Confidence 5555544589999999999999999865 357777664
No 7
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=96.15 E-value=0.002 Score=65.19 Aligned_cols=51 Identities=14% Similarity=0.087 Sum_probs=35.0
Q ss_pred ccCCCCCCCCCCCCCccccCCCCcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 200 SSYRPLKQPRPTISDCDRDHGQSVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 200 ~s~Rplk~~~i~~~~~v~~~~~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.+.++++.-+. ..+++.-.++-.--+.+|.+|.|||.|.|||||+|++|+|
T Consensus 192 ~s~G~v~w~p~--d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLL 242 (576)
T KOG0585|consen 192 CSKGEVKWCPP--DKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLL 242 (576)
T ss_pred ccCCccccCCC--CcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheE
Confidence 34567666553 2222222233334467888999999999999999999986
No 8
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=95.91 E-value=0.003 Score=59.80 Aligned_cols=29 Identities=17% Similarity=0.162 Sum_probs=27.0
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+++|+++|+|||++.|+|+|+|+||||
T Consensus 121 ~ytr~iL~GL~ylHs~g~vH~DiK~~NiL 149 (313)
T KOG0198|consen 121 RYTRQILEGLAYLHSKGIVHCDIKPANIL 149 (313)
T ss_pred HHHHHHHHHHHHHHhCCEeccCcccceEE
Confidence 45689999999999999999999999997
No 9
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.64 E-value=0.0028 Score=67.00 Aligned_cols=50 Identities=20% Similarity=0.379 Sum_probs=39.6
Q ss_pred ccCCCCCCCCCCCCCccccCCCCcchhHHHHHHhhhhccccccccCcchhhhH-----hhhhccc
Q 024658 200 SSYRPLKQPRPTISDCDRDHGQSVSRSTAIISSLRGLQNQTMTDQGDAAAAIT-----GICRLSR 259 (264)
Q Consensus 200 ~s~Rplk~~~i~~~~~v~~~~~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~-----~ic~l~~ 259 (264)
+-.+|||+---+++= -+.+|+++|+|||.+.|.|||+|+-|+| |+||+|-
T Consensus 665 skWGPlKDNEstm~f----------YtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISD 719 (1226)
T KOG4279|consen 665 SKWGPLKDNESTMNF----------YTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISD 719 (1226)
T ss_pred hccCCCccchhHHHH----------HHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecc
Confidence 346889885433322 3589999999999999999999999987 8888763
No 10
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=95.36 E-value=0.0073 Score=58.80 Aligned_cols=30 Identities=10% Similarity=0.153 Sum_probs=27.1
Q ss_pred cchhHHHHHHhhhhcc-ccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQN-QTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~-~~i~~~d~~~a~i~ 252 (264)
.+-+.+|+.+|.|||+ -.|||||+|++|||
T Consensus 181 ~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlL 211 (364)
T KOG0581|consen 181 GKIARAVLRGLSYLHEERKIIHRDIKPSNLL 211 (364)
T ss_pred HHHHHHHHHHHHHHhhccCeeeccCCHHHee
Confidence 3456899999999996 99999999999997
No 11
>smart00336 BBOX B-Box-type zinc finger.
Probab=95.30 E-value=0.012 Score=38.44 Aligned_cols=40 Identities=15% Similarity=-0.020 Sum_probs=28.7
Q ss_pred ccccccccccCCCCceecccCCCCcccCchhhhcccCCCCCCcc
Q 024658 42 RCLLCHVCQSLTPWKASGPKLGPTVSVCDACVAAARCGVNDDDK 85 (264)
Q Consensus 42 RvpLC~~C~~~p~~ka~~~C~~d~~~LC~~Cd~~~n~~~H~r~p 85 (264)
|.++|..++..+ +.+||..|...||..|... .-.+|...|
T Consensus 2 ~~~~C~~h~~~~---~~~~C~~c~~~iC~~C~~~-~H~~H~~~~ 41 (42)
T smart00336 2 RPPKCDSHGDEP---AEFFCEECGALLCRTCDEA-EHRGHTVVL 41 (42)
T ss_pred cCCcCCCCCCCc---eEEECCCCCcccccccChh-hcCCCceec
Confidence 455665555444 8999999999999999975 225666554
No 12
>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues. The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus
Probab=95.09 E-value=0.019 Score=54.46 Aligned_cols=8 Identities=13% Similarity=-0.135 Sum_probs=3.1
Q ss_pred cccCCCCc
Q 024658 59 GPKLGPTV 66 (264)
Q Consensus 59 ~~C~~d~~ 66 (264)
+.|+.|.+
T Consensus 183 ~sCLRCK~ 190 (314)
T PF06524_consen 183 YSCLRCKI 190 (314)
T ss_pred hhhhheee
Confidence 33443333
No 13
>PF09026 CENP-B_dimeris: Centromere protein B dimerisation domain; InterPro: IPR015115 Centromere protein B (CENP-B) interacts with centromeric heterochromatin in chromosomes and binds to a specific subset of alphoid satellite DNA, called the CENP-B box. CENP-B may organise arrays of centromere satellite DNA into a higher order structure, which then directs centromere formation and kinetochore assembly in mammalian chromosomes. The CENP-B dimerisation domain is composed of two alpha-helices, which are folded into an antiparallel configuration. Dimerisation of CENP-B is mediated by this domain, in which monomers dimerise to form a symmetrical, antiparallel, four-helix bundle structure with a large hydrophobic patch in which 23 residues of one monomer form van der Waals contacts with the other monomer. This CENP-B dimer configuration may be suitable for capturing two distant CENP-B boxes during centromeric heterochromatin formation []. ; GO: 0003677 DNA binding, 0003682 chromatin binding, 0006355 regulation of transcription, DNA-dependent, 0000775 chromosome, centromeric region, 0005634 nucleus; PDB: 1UFI_A.
Probab=95.03 E-value=0.0063 Score=49.77 Aligned_cols=6 Identities=33% Similarity=0.340 Sum_probs=0.0
Q ss_pred eecCCC
Q 024658 135 VVPWSG 140 (264)
Q Consensus 135 vVp~s~ 140 (264)
-|||..
T Consensus 40 e~p~p~ 45 (101)
T PF09026_consen 40 EVPVPE 45 (101)
T ss_dssp ------
T ss_pred cccchh
Confidence 568866
No 14
>PF10446 DUF2457: Protein of unknown function (DUF2457); InterPro: IPR018853 This entry represents a family of uncharacterised proteins.
Probab=94.79 E-value=0.019 Score=57.27 Aligned_cols=16 Identities=13% Similarity=0.023 Sum_probs=9.0
Q ss_pred hhhccccccccCcchh
Q 024658 234 RGLQNQTMTDQGDAAA 249 (264)
Q Consensus 234 ~~l~~~~i~~~d~~~a 249 (264)
++.-+..+|-+||.++
T Consensus 217 Rr~~K~~~iPQDIDPS 232 (458)
T PF10446_consen 217 RRREKHIPIPQDIDPS 232 (458)
T ss_pred HHHcCCCCCCCCCCCC
Confidence 3445556666666654
No 15
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=94.57 E-value=0.0099 Score=60.94 Aligned_cols=36 Identities=8% Similarity=0.027 Sum_probs=32.3
Q ss_pred ccCCCCcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 217 RDHGQSVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 217 ~~~~~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+.-+++-...+|||.+|+|||+..|||||.|=.|||
T Consensus 115 ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlf 150 (592)
T KOG0575|consen 115 LTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLF 150 (592)
T ss_pred CCcHHHHHHHHHHHHHHHHHHhcCceecccchhhee
Confidence 556777788899999999999999999999998886
No 16
>PF00643 zf-B_box: B-box zinc finger; InterPro: IPR000315 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents B-box-type zinc finger domains, which are around 40 residues in length. B-box zinc fingers can be divided into two groups, where types 1 and 2 B-box domains differ in their consensus sequence and in the spacing of the 7-8 zinc-binding residues. Several proteins contain both types 1 and 2 B-boxes, suggesting some level of cooperativity between these two domains. B-box domains are found in over 1500 proteins from a variety of organisms. They are found in TRIM (tripartite motif) proteins that consist of an N-terminal RING finger (originally called an A-box), followed by 1-2 B-box domains and a coiled-coil domain (also called RBCC for Ring, B-box, Coiled-Coil). TRIM proteins contain a type 2 B-box domain, and may also contain a type 1 B-box. In proteins that do not contain RING or coiled-coil domains, the B-box domain is primarily type 2. Many type 2 B-box proteins are involved in ubiquitinylation. Proteins containing a B-box zinc finger domain include transcription factors, ribonucleoproteins and proto-oncoproteins; for example, MID1, MID2, TRIM9, TNL, TRIM36, TRIM63, TRIFIC, NCL1 and CONSTANS-like proteins []. The microtubule-associated E3 ligase MID1 (6.3.2 from EC) contains a type 1 B-box zinc finger domain. MID1 specifically binds Alpha-4, which in turn recruits the catalytic subunit of phosphatase 2A (PP2Ac). This complex is required for targeting of PP2Ac for proteasome-mediated degradation. The MID1 B-box coordinates two zinc ions and adopts a beta/beta/alpha cross-brace structure similar to that of ZZ, PHD, RING and FYVE zinc fingers [, ]. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 3DDT_B 2D8U_A 3Q1D_A 2EGM_A 2YVR_B 2DJA_A 2DQ5_A 2JUN_A 2YRG_A 2DID_A ....
Probab=94.56 E-value=0.02 Score=38.11 Aligned_cols=37 Identities=11% Similarity=0.016 Sum_probs=26.0
Q ss_pred ccccCCCCceecccCCCCcccCchhhhcccCCCCCCcc
Q 024658 48 VCQSLTPWKASGPKLGPTVSVCDACVAAARCGVNDDDK 85 (264)
Q Consensus 48 ~C~~~p~~ka~~~C~~d~~~LC~~Cd~~~n~~~H~r~p 85 (264)
.|..|+...+.+||..|..+||..|.... =.+|..+|
T Consensus 5 ~C~~H~~~~~~~~C~~C~~~~C~~C~~~~-H~~H~~~~ 41 (42)
T PF00643_consen 5 KCPEHPEEPLSLFCEDCNEPLCSECTVSG-HKGHKIVP 41 (42)
T ss_dssp B-SSTTTSBEEEEETTTTEEEEHHHHHTS-TTTSEEEE
T ss_pred cCccCCccceEEEecCCCCccCccCCCCC-CCCCEEeE
Confidence 34555555599999999999999999953 12255444
No 17
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=94.28 E-value=0.018 Score=57.45 Aligned_cols=35 Identities=9% Similarity=0.087 Sum_probs=29.9
Q ss_pred cCCCCcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 218 DHGQSVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 218 ~~~~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.++..--...||+..|+|||++.|||||+||-|||
T Consensus 274 ~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNIL 308 (475)
T KOG0615|consen 274 REDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENIL 308 (475)
T ss_pred ccchhHHHHHHHHHHHHHHHHcCcccccCCcceEE
Confidence 34444456789999999999999999999999997
No 18
>PF09026 CENP-B_dimeris: Centromere protein B dimerisation domain; InterPro: IPR015115 Centromere protein B (CENP-B) interacts with centromeric heterochromatin in chromosomes and binds to a specific subset of alphoid satellite DNA, called the CENP-B box. CENP-B may organise arrays of centromere satellite DNA into a higher order structure, which then directs centromere formation and kinetochore assembly in mammalian chromosomes. The CENP-B dimerisation domain is composed of two alpha-helices, which are folded into an antiparallel configuration. Dimerisation of CENP-B is mediated by this domain, in which monomers dimerise to form a symmetrical, antiparallel, four-helix bundle structure with a large hydrophobic patch in which 23 residues of one monomer form van der Waals contacts with the other monomer. This CENP-B dimer configuration may be suitable for capturing two distant CENP-B boxes during centromeric heterochromatin formation []. ; GO: 0003677 DNA binding, 0003682 chromatin binding, 0006355 regulation of transcription, DNA-dependent, 0000775 chromosome, centromeric region, 0005634 nucleus; PDB: 1UFI_A.
Probab=93.73 E-value=0.018 Score=47.14 Aligned_cols=14 Identities=36% Similarity=0.681 Sum_probs=0.4
Q ss_pred hhhccccCCceecC
Q 024658 125 EEEEEDDENQVVPW 138 (264)
Q Consensus 125 ~~~ee~~enqvVp~ 138 (264)
+++++++++-|--.
T Consensus 33 dddee~de~p~p~f 46 (101)
T PF09026_consen 33 DDDEEEDEVPVPEF 46 (101)
T ss_dssp -------------H
T ss_pred ccccccccccchhH
Confidence 33333335555443
No 19
>PHA02882 putative serine/threonine kinase; Provisional
Probab=93.69 E-value=0.032 Score=49.19 Aligned_cols=29 Identities=7% Similarity=0.155 Sum_probs=26.3
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||++.|+|||+|++|||
T Consensus 130 ~i~~qi~~~l~~lH~~~iiHrDiKp~Nil 158 (294)
T PHA02882 130 NIMKDMLTTLEYIHEHGISHGDIKPENIM 158 (294)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 34578999999999999999999999996
No 20
>PF10446 DUF2457: Protein of unknown function (DUF2457); InterPro: IPR018853 This entry represents a family of uncharacterised proteins.
Probab=93.57 E-value=0.04 Score=55.03 Aligned_cols=16 Identities=13% Similarity=0.270 Sum_probs=8.6
Q ss_pred CCCCccccCCCCCCCC
Q 024658 176 DLFSDDEIGCSSRPVT 191 (264)
Q Consensus 176 ~~~s~~~~~~~s~~~~ 191 (264)
+|--.-++-|.+--..
T Consensus 188 ~LPDSTDFVCGTLDED 203 (458)
T PF10446_consen 188 ELPDSTDFVCGTLDED 203 (458)
T ss_pred CCCCcccccCCCcCCc
Confidence 4444456667665433
No 21
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=93.53 E-value=0.034 Score=48.93 Aligned_cols=29 Identities=17% Similarity=0.094 Sum_probs=26.7
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||++.|+|+|.|+.|||
T Consensus 112 ~i~~qi~~al~~LH~~~ivHrDlkp~Nil 140 (317)
T cd07868 112 SLLYQILDGIHYLHANWVLHRDLKPANIL 140 (317)
T ss_pred HHHHHHHHHHHHHHhCCEEcCCCCHHHEE
Confidence 44689999999999999999999999998
No 22
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=93.40 E-value=0.036 Score=56.86 Aligned_cols=28 Identities=14% Similarity=0.199 Sum_probs=26.3
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+||++|.|||+..|||||.|+-|||
T Consensus 179 YAAeIldAleylH~~GIIHRDlKPENIL 206 (604)
T KOG0592|consen 179 YAAEILDALEYLHSNGIIHRDLKPENIL 206 (604)
T ss_pred HHHHHHHHHHHHHhcCceeccCChhhee
Confidence 3678999999999999999999999997
No 23
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=93.32 E-value=0.04 Score=48.19 Aligned_cols=29 Identities=17% Similarity=0.094 Sum_probs=26.7
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+...+|+.+|.+||++.|+|+|.|++|||
T Consensus 112 ~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil 140 (317)
T cd07867 112 SLLYQILDGIHYLHANWVLHRDLKPANIL 140 (317)
T ss_pred HHHHHHHHHHHHHHhCCEEcCCCCHHHEE
Confidence 44579999999999999999999999997
No 24
>KOG0943 consensus Predicted ubiquitin-protein ligase/hyperplastic discs protein, HECT superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=93.25 E-value=0.055 Score=60.14 Aligned_cols=18 Identities=28% Similarity=0.497 Sum_probs=10.2
Q ss_pred cCCCCccccCCCCCCCCC
Q 024658 89 RGGSQSERISGHDETDDD 106 (264)
Q Consensus 89 ~~g~p~~~~~~~d~~~~d 106 (264)
|.|.-...+.+||+.+||
T Consensus 1730 f~GEed~~Dddndddddd 1747 (3015)
T KOG0943|consen 1730 FAGEEDHHDDDNDDDDDD 1747 (3015)
T ss_pred ccCccccccccccccccc
Confidence 666666666666554433
No 25
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=93.25 E-value=0.033 Score=61.34 Aligned_cols=27 Identities=15% Similarity=0.154 Sum_probs=25.5
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-++|+++|.|+|++.|||||.||-|||
T Consensus 703 FreIlEGLaYIH~~giIHRDLKP~NIF 729 (1351)
T KOG1035|consen 703 FREILEGLAYIHDQGIIHRDLKPRNIF 729 (1351)
T ss_pred HHHHHHHHHHHHhCceeeccCCcceeE
Confidence 378999999999999999999999997
No 26
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=93.12 E-value=0.042 Score=47.46 Aligned_cols=29 Identities=10% Similarity=0.095 Sum_probs=26.3
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||++.|+|+|.+++|||
T Consensus 114 ~i~~qi~~aL~~lH~~~iiH~dlkp~Nil 142 (290)
T cd07862 114 DMMFQLLRGLDFLHSHRVVHRDLKPQNIL 142 (290)
T ss_pred HHHHHHHHHHHHHHHCCeeeCCCCHHHEE
Confidence 34578999999999999999999999997
No 27
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=93.08 E-value=0.04 Score=46.22 Aligned_cols=30 Identities=13% Similarity=0.217 Sum_probs=26.8
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||++.|+|+|.+++|||
T Consensus 104 ~~~~~~i~~~l~~LH~~~i~H~dlkp~Nil 133 (259)
T cd05037 104 LDVAKQLASALHYLEDKKLVHGNVCGKNIL 133 (259)
T ss_pred HHHHHHHHHHHHHHhhCCeecccCccceEE
Confidence 344579999999999999999999999987
No 28
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=93.06 E-value=0.048 Score=47.67 Aligned_cols=29 Identities=3% Similarity=-0.009 Sum_probs=26.4
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.++.|||
T Consensus 107 ~~~~qi~~aL~~LH~~~ivH~dlkp~Nil 135 (288)
T cd07871 107 IFMFQLLRGLSYCHKRKILHRDLKPQNLL 135 (288)
T ss_pred HHHHHHHHHHHHHHhCCcccCCCCHHHEE
Confidence 34578999999999999999999999996
No 29
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=92.93 E-value=0.042 Score=49.00 Aligned_cols=28 Identities=18% Similarity=0.096 Sum_probs=25.6
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|+|+.|||
T Consensus 179 ~~~qi~~aL~~LH~~~ivHrDiKp~Nil 206 (338)
T cd05102 179 YSFQVARGMEFLASRKCIHRDLAARNIL 206 (338)
T ss_pred HHHHHHHHHHHHHHCCEECCCCccceEE
Confidence 3468999999999999999999999985
No 30
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=92.81 E-value=0.05 Score=47.50 Aligned_cols=30 Identities=13% Similarity=0.169 Sum_probs=26.8
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||++.|+|+|++++|||
T Consensus 105 ~~~~~qi~~~l~~lH~~~iiH~dikp~Nil 134 (285)
T cd05631 105 IFYAAELCCGLEDLQRERIVYRDLKPENIL 134 (285)
T ss_pred HHHHHHHHHHHHHHHhCCEEeCCCCHHHEE
Confidence 345678999999999999999999999985
No 31
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=92.77 E-value=0.053 Score=47.84 Aligned_cols=29 Identities=7% Similarity=0.038 Sum_probs=26.2
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|+++.|||
T Consensus 107 ~i~~qi~~aL~~LH~~~ivH~dlkp~NIl 135 (338)
T cd07859 107 FFLYQLLRALKYIHTANVFHRDLKPKNIL 135 (338)
T ss_pred HHHHHHHHHHHHHHHCCeecCCCCHHHeE
Confidence 34578999999999999999999999986
No 32
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=92.74 E-value=0.051 Score=48.66 Aligned_cols=28 Identities=14% Similarity=0.109 Sum_probs=25.8
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|||.++.|||
T Consensus 100 ~~~qi~~~L~~lH~~~ivHrDlkp~NIl 127 (323)
T cd05571 100 YGAEIVSALGYLHSCDVVYRDLKLENLM 127 (323)
T ss_pred HHHHHHHHHHHHHhCCeEeCCCCHHHEE
Confidence 3468999999999999999999999996
No 33
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=92.67 E-value=0.056 Score=48.26 Aligned_cols=28 Identities=21% Similarity=0.132 Sum_probs=25.8
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|||+|+.|||
T Consensus 110 ~~~qi~~~l~~lH~~~ivHrDlkp~Nil 137 (332)
T cd05614 110 YSGEIILALEHLHKLGIVYRDIKLENIL 137 (332)
T ss_pred HHHHHHHHHHHHHHCCcEecCCCHHHeE
Confidence 4468999999999999999999999996
No 34
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=92.64 E-value=0.054 Score=48.40 Aligned_cols=28 Identities=18% Similarity=0.114 Sum_probs=25.8
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|++||++.|+|+|++++|||
T Consensus 101 ~~~qi~~~l~~lH~~givH~dikp~NIl 128 (323)
T cd05575 101 YAAEIASALGYLHSLNIIYRDLKPENIL 128 (323)
T ss_pred HHHHHHHHHHHHHHCCeEeCCCCHHHeE
Confidence 3578999999999999999999999996
No 35
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=92.50 E-value=0.057 Score=48.71 Aligned_cols=28 Identities=14% Similarity=0.146 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|+++.|||
T Consensus 100 ~~~qi~~aL~~LH~~~ivHrDikp~NIl 127 (328)
T cd05593 100 YGAEIVSALDYLHSGKIVYRDLKLENLM 127 (328)
T ss_pred HHHHHHHHHHHHHhCCeEecccCHHHeE
Confidence 4578999999999999999999999995
No 36
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=92.49 E-value=0.059 Score=48.20 Aligned_cols=28 Identities=18% Similarity=0.121 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|||.+++|||
T Consensus 101 ~~~qi~~~L~~lH~~giiHrDlkp~Nil 128 (325)
T cd05602 101 YAAEIASALGYLHSLNIVYRDLKPENIL 128 (325)
T ss_pred HHHHHHHHHHHHHHCCeEecCCCHHHeE
Confidence 3478999999999999999999999985
No 37
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=92.24 E-value=0.059 Score=45.99 Aligned_cols=29 Identities=14% Similarity=0.098 Sum_probs=26.3
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhHh
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAITG 253 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~~ 253 (264)
...+|+.+|++||++.|+|+|.++++||-
T Consensus 105 ~~~qi~~~l~~lH~~~iiH~dlkp~nili 133 (258)
T cd05078 105 VAKQLAWALHFLEDKGLTHGNVCAKNVLL 133 (258)
T ss_pred HHHHHHHHHHHHHHCCeecCCCccceEEE
Confidence 45789999999999999999999999874
No 38
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=92.22 E-value=0.067 Score=45.66 Aligned_cols=29 Identities=14% Similarity=0.048 Sum_probs=26.0
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.+++|||
T Consensus 104 ~~~~qi~~~l~~lH~~~ivH~dlkp~Nil 132 (269)
T cd05042 104 RMACEVASGLLWLHQADFIHSDLALRNCQ 132 (269)
T ss_pred HHHHHHHHHHHHHHhcCEecccccHhheE
Confidence 34568999999999999999999999985
No 39
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=92.21 E-value=0.065 Score=48.95 Aligned_cols=31 Identities=0% Similarity=0.009 Sum_probs=27.3
Q ss_pred CcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 222 SVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 222 ~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
......+|+.+|.+||++.|+|||.|+.|||
T Consensus 103 ~~~~~~qi~~aL~~lH~~givHrDlKp~NIL 133 (363)
T cd05628 103 TQFYIAETVLAIDSIHQLGFIHRDIKPDNLL 133 (363)
T ss_pred HHHHHHHHHHHHHHHHhCCeEecCCCHHHeE
Confidence 3445678999999999999999999999996
No 40
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=92.20 E-value=0.066 Score=47.44 Aligned_cols=28 Identities=14% Similarity=0.187 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|++||++.|+|+|.++.|||
T Consensus 114 ~~~qi~~~L~~LH~~~iiH~dlkp~Nil 141 (316)
T cd05108 114 WCVQIAKGMNYLEERRLVHRDLAARNVL 141 (316)
T ss_pred HHHHHHHHHHHHHhcCeeccccchhheE
Confidence 4568999999999999999999999986
No 41
>PHA03212 serine/threonine kinase US3; Provisional
Probab=92.20 E-value=0.069 Score=50.25 Aligned_cols=29 Identities=10% Similarity=0.198 Sum_probs=26.1
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|||+|++|||
T Consensus 186 ~i~~qi~~aL~ylH~~~IvHrDiKP~NIl 214 (391)
T PHA03212 186 AIERSVLRAIQYLHENRIIHRDIKAENIF 214 (391)
T ss_pred HHHHHHHHHHHHHHhCCcccCCCChHhEE
Confidence 34568999999999999999999999996
No 42
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=92.18 E-value=0.062 Score=48.17 Aligned_cols=29 Identities=3% Similarity=0.088 Sum_probs=26.1
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|+++.|||
T Consensus 122 ~i~~qi~~aL~~LH~~~ivHrdikp~Nil 150 (343)
T cd07878 122 FLIYQLLRGLKYIHSAGIIHRDLKPSNVA 150 (343)
T ss_pred HHHHHHHHHHHHHHHCCeecccCChhhEE
Confidence 34578999999999999999999999985
No 43
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=92.16 E-value=0.066 Score=49.68 Aligned_cols=28 Identities=4% Similarity=0.172 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|||.|+.|||
T Consensus 147 ~~~qil~aL~~LH~~~IvHrDLKp~NIL 174 (370)
T cd05621 147 YTAEVVLALDAIHSMGLIHRDVKPDNML 174 (370)
T ss_pred HHHHHHHHHHHHHHCCeEecCCCHHHEE
Confidence 4468999999999999999999999985
No 44
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=92.13 E-value=0.069 Score=48.90 Aligned_cols=27 Identities=4% Similarity=0.079 Sum_probs=25.5
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||++.|+|||+|+.|||
T Consensus 107 ~~ql~~aL~~LH~~givHrDlkp~NIl 133 (377)
T cd05629 107 MAECVLAIEAVHKLGFIHRDIKPDNIL 133 (377)
T ss_pred HHHHHHHHHHHHhCCeeccCCCHHHEE
Confidence 578999999999999999999999997
No 45
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=92.09 E-value=0.068 Score=46.98 Aligned_cols=28 Identities=4% Similarity=0.030 Sum_probs=25.8
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|.|+.|||
T Consensus 108 ~~~qi~~al~~lH~~~ivH~dlkp~Nil 135 (303)
T cd07869 108 FLFQLLRGLSYIHQRYILHRDLKPQNLL 135 (303)
T ss_pred HHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence 4478999999999999999999999996
No 46
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=92.07 E-value=0.067 Score=47.85 Aligned_cols=28 Identities=11% Similarity=0.107 Sum_probs=25.6
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|||+++.|||
T Consensus 101 ~~~qil~al~~LH~~~ivHrDlkp~Nil 128 (330)
T cd05586 101 YIAELVLALEHLHKYDIVYRDLKPENIL 128 (330)
T ss_pred HHHHHHHHHHHHHHCCeEeccCCHHHeE
Confidence 3468999999999999999999999996
No 47
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=92.06 E-value=0.075 Score=46.26 Aligned_cols=30 Identities=17% Similarity=0.258 Sum_probs=27.0
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||++.|+|+|.+++|||
T Consensus 120 ~~i~~qi~~~l~~lH~~~iiH~dlkp~Nil 149 (274)
T cd05076 120 ITVAQQLASALSYLEDKNLVHGNVCAKNIL 149 (274)
T ss_pred HHHHHHHHHHHHHHHcCCccCCCCCcccEE
Confidence 345678999999999999999999999997
No 48
>PTZ00036 glycogen synthase kinase; Provisional
Probab=92.06 E-value=0.07 Score=50.99 Aligned_cols=27 Identities=7% Similarity=0.091 Sum_probs=25.1
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||++.|+|||.|+.|||
T Consensus 176 ~~qi~~gL~yLH~~~IiHrDLKp~NIL 202 (440)
T PTZ00036 176 SYQLCRALAYIHSKFICHRDLKPQNLL 202 (440)
T ss_pred HHHHHHHHHHHHHCCEecCCcCHHHEE
Confidence 358999999999999999999999987
No 49
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=92.03 E-value=0.071 Score=47.63 Aligned_cols=29 Identities=14% Similarity=0.064 Sum_probs=26.4
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.|++|||
T Consensus 105 ~~~~qi~~aL~~lH~~~ivHrDlkp~Nil 133 (328)
T cd08226 105 NILFGALRGLNYLHQNGYIHRNIKASHIL 133 (328)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 44578999999999999999999999996
No 50
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=92.01 E-value=0.058 Score=52.66 Aligned_cols=34 Identities=9% Similarity=0.218 Sum_probs=30.0
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH-----hhhhcc
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT-----GICRLS 258 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~-----~ic~l~ 258 (264)
-+-||..+|.|||+..|-|||+|+.||| |+-|||
T Consensus 130 Yt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKic 168 (364)
T KOG0658|consen 130 YTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKIC 168 (364)
T ss_pred HHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEec
Confidence 3579999999999999999999999997 666665
No 51
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=91.97 E-value=0.075 Score=47.25 Aligned_cols=28 Identities=11% Similarity=0.167 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|||.+++|||
T Consensus 98 ~~~qi~~~l~~lH~~~i~HrDlkp~Nil 125 (312)
T cd05585 98 YTAELLCALENLHKFNVIYRDLKPENIL 125 (312)
T ss_pred HHHHHHHHHHHHHhCCeEeCCCCHHHeE
Confidence 4568999999999999999999999985
No 52
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=91.96 E-value=0.077 Score=47.94 Aligned_cols=28 Identities=7% Similarity=0.156 Sum_probs=25.9
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|||.++.|||
T Consensus 124 ~~~qi~~aL~~LH~~givHrDikp~Nil 151 (355)
T cd07874 124 LLYQMLCGIKHLHSAGIIHRDLKPSNIV 151 (355)
T ss_pred HHHHHHHHHHHHHhCCcccCCCChHHEE
Confidence 4578999999999999999999999996
No 53
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=91.92 E-value=0.076 Score=47.50 Aligned_cols=30 Identities=13% Similarity=0.018 Sum_probs=26.9
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||++.|+|+|.++.|||
T Consensus 104 ~~~~~qi~~al~~lH~~~ivH~dlkp~Nil 133 (324)
T cd05587 104 VFYAAEIAIGLFFLHSKGIIYRDLKLDNVM 133 (324)
T ss_pred HHHHHHHHHHHHHHHHCCeEecCCCHHHeE
Confidence 345678999999999999999999999996
No 54
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=91.91 E-value=0.072 Score=49.10 Aligned_cols=27 Identities=4% Similarity=0.083 Sum_probs=25.3
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||++.|+|||+|++|||
T Consensus 107 ~~qi~~aL~~LH~~givHrDlKp~Nil 133 (381)
T cd05626 107 IAELTLAIESVHKMGFIHRDIKPDNIL 133 (381)
T ss_pred HHHHHHHHHHHHhCCeeecCCcHHHEE
Confidence 468999999999999999999999996
No 55
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=91.89 E-value=0.075 Score=47.35 Aligned_cols=28 Identities=11% Similarity=0.089 Sum_probs=25.8
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|||+++.|||
T Consensus 101 ~~~qi~~~L~~lH~~~ivH~Dlkp~NIl 128 (321)
T cd05603 101 YAAEVASAIGYLHSLNIIYRDLKPENIL 128 (321)
T ss_pred HHHHHHHHHHHHHHCCeEeccCCHHHeE
Confidence 3578999999999999999999999986
No 56
>PHA03210 serine/threonine kinase US3; Provisional
Probab=91.88 E-value=0.076 Score=51.78 Aligned_cols=28 Identities=4% Similarity=0.112 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|||+|++|||
T Consensus 272 i~~ql~~aL~yLH~~gIiHrDLKP~NIL 299 (501)
T PHA03210 272 IMKQLLCAVEYIHDKKLIHRDIKLENIF 299 (501)
T ss_pred HHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 3468889999999999999999999986
No 57
>PLN00181 protein SPA1-RELATED; Provisional
Probab=91.85 E-value=0.07 Score=54.79 Aligned_cols=29 Identities=7% Similarity=0.069 Sum_probs=26.6
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.|||++.|+|||.|++|||
T Consensus 84 ~i~~qi~~al~~lH~~gIvHrDlKP~NiL 112 (793)
T PLN00181 84 HVFRQIVEIVNAAHSQGIVVHNVRPSCFV 112 (793)
T ss_pred HHHHHHHHHHHHHHhCCeeeccCCchhEE
Confidence 34579999999999999999999999998
No 58
>PHA03207 serine/threonine kinase US3; Provisional
Probab=91.70 E-value=0.085 Score=49.04 Aligned_cols=29 Identities=10% Similarity=0.157 Sum_probs=26.2
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|||+|++|||
T Consensus 189 ~i~~ql~~aL~~LH~~givHrDlkp~Nil 217 (392)
T PHA03207 189 TIQRRLLEALAYLHGRGIIHRDVKTENIF 217 (392)
T ss_pred HHHHHHHHHHHHHHHCCccccCCCHHHEE
Confidence 44578999999999999999999999986
No 59
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=91.70 E-value=0.083 Score=45.43 Aligned_cols=29 Identities=10% Similarity=0.082 Sum_probs=26.2
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.++.|||
T Consensus 112 ~~~~qi~~al~~lH~~~ivH~dikp~Nil 140 (288)
T cd07863 112 DLMRQFLRGLDFLHANCIVHRDLKPENIL 140 (288)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 34578999999999999999999999987
No 60
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=91.68 E-value=0.074 Score=47.50 Aligned_cols=28 Identities=11% Similarity=0.122 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|.++.|||
T Consensus 106 i~~qi~~~L~~LH~~~iiH~dlkp~Nil 133 (327)
T cd08227 106 ILQGVLKALDYIHHMGYVHRSVKASHIL 133 (327)
T ss_pred HHHHHHHHHHHHHHCCEecCCCChhhEE
Confidence 3467899999999999999999999996
No 61
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=91.64 E-value=0.086 Score=47.09 Aligned_cols=28 Identities=11% Similarity=0.007 Sum_probs=25.8
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|||.++.|||
T Consensus 101 ~~~qi~~aL~~LH~~~ivHrDikp~Nil 128 (321)
T cd05591 101 YAAEVTLALMFLHRHGVIYRDLKLDNIL 128 (321)
T ss_pred HHHHHHHHHHHHHHCCeeccCCCHHHeE
Confidence 4578999999999999999999999996
No 62
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=91.64 E-value=0.087 Score=47.78 Aligned_cols=28 Identities=7% Similarity=0.156 Sum_probs=25.8
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|||.++.|||
T Consensus 128 ~~~qi~~~L~~LH~~~ivHrDlkp~NIl 155 (359)
T cd07876 128 LLYQMLCGIKHLHSAGIIHRDLKPSNIV 155 (359)
T ss_pred HHHHHHHHHHHHHhCCcccCCCCHHHEE
Confidence 3468999999999999999999999996
No 63
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=91.61 E-value=0.08 Score=48.34 Aligned_cols=27 Identities=4% Similarity=0.110 Sum_probs=25.1
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||++.|+|||+|+.|||
T Consensus 107 ~~qi~~al~~lH~~~ivHrDlkp~Nil 133 (376)
T cd05598 107 IAELTCAIESVHKMGFIHRDIKPDNIL 133 (376)
T ss_pred HHHHHHHHHHHHHCCeEeCCCCHHHEE
Confidence 468999999999999999999999996
No 64
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=91.61 E-value=0.087 Score=47.19 Aligned_cols=28 Identities=11% Similarity=0.137 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|||+++.|||
T Consensus 101 ~~~qi~~~l~~lH~~~ivHrDlkp~Nil 128 (316)
T cd05620 101 YAAEIVCGLQFLHSKGIIYRDLKLDNVM 128 (316)
T ss_pred HHHHHHHHHHHHHHCCeEecCCCHHHeE
Confidence 4468999999999999999999999985
No 65
>PTZ00284 protein kinase; Provisional
Probab=91.55 E-value=0.087 Score=50.22 Aligned_cols=29 Identities=7% Similarity=-0.104 Sum_probs=25.3
Q ss_pred hhHHHHHHhhhhccc-cccccCcchhhhHh
Q 024658 225 RSTAIISSLRGLQNQ-TMTDQGDAAAAITG 253 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~-~i~~~d~~~a~i~~ 253 (264)
...+|+.+|.+||.+ .|+|||+|++|||-
T Consensus 236 i~~qi~~aL~yLH~~~gIiHrDlKP~NILl 265 (467)
T PTZ00284 236 IIFQTGVALDYFHTELHLMHTDLKPENILM 265 (467)
T ss_pred HHHHHHHHHHHHHhcCCeecCCCCHHHEEE
Confidence 346889999999974 99999999999973
No 66
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=91.55 E-value=0.082 Score=53.06 Aligned_cols=27 Identities=19% Similarity=0.286 Sum_probs=25.0
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||++.|+|||+|++|||
T Consensus 261 ~~qll~aL~yLH~~gIiHRDLKP~NIL 287 (566)
T PLN03225 261 MRQILFALDGLHSTGIVHRDVKPQNII 287 (566)
T ss_pred HHHHHHHHHHHHHCCEEeCcCCHHHEE
Confidence 467899999999999999999999996
No 67
>PHA03209 serine/threonine kinase US3; Provisional
Probab=91.51 E-value=0.089 Score=48.14 Aligned_cols=28 Identities=21% Similarity=0.239 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|||+|+.|||
T Consensus 162 i~~qi~~aL~~LH~~~ivHrDlkp~Nil 189 (357)
T PHA03209 162 IEKQILEGLRYLHAQRIIHRDVKTENIF 189 (357)
T ss_pred HHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence 4478999999999999999999999996
No 68
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=91.50 E-value=0.091 Score=46.15 Aligned_cols=29 Identities=14% Similarity=0.161 Sum_probs=26.5
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.++.|||
T Consensus 105 ~~~~qi~~~l~~lH~~~i~H~dlkp~NIl 133 (291)
T cd05612 105 FYASEIVCALEYLHSKEIVYRDLKPENIL 133 (291)
T ss_pred HHHHHHHHHHHHHHHCCeeecCCCHHHeE
Confidence 34578999999999999999999999997
No 69
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=91.47 E-value=0.094 Score=47.92 Aligned_cols=28 Identities=11% Similarity=0.099 Sum_probs=25.8
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|.++.|||
T Consensus 108 ~~~qi~~aL~~LH~~~ivH~dlkp~Nil 135 (372)
T cd07853 108 FLYQILRGLKYLHSAGILHRDIKPGNLL 135 (372)
T ss_pred HHHHHHHHHHHHHhCCeeCCCCChHHEE
Confidence 4578999999999999999999999986
No 70
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=91.47 E-value=0.085 Score=47.38 Aligned_cols=29 Identities=14% Similarity=0.137 Sum_probs=26.0
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.++.|||
T Consensus 99 ~~~~qi~~aL~~LH~~~ivH~Dlkp~NIl 127 (323)
T cd05595 99 FYGAEIVSALEYLHSRDVVYRDIKLENLM 127 (323)
T ss_pred HHHHHHHHHHHHHHHCCeEecCCCHHHEE
Confidence 34578999999999999999999999985
No 71
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=91.46 E-value=0.078 Score=45.63 Aligned_cols=30 Identities=13% Similarity=0.165 Sum_probs=27.1
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||++.|+|+|.++.|||
T Consensus 112 ~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil 141 (279)
T cd05109 112 LNWCVQIAKGMSYLEEVRLVHRDLAARNVL 141 (279)
T ss_pred HHHHHHHHHHHHHHHHCCeeccccccceEE
Confidence 445689999999999999999999999986
No 72
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=91.46 E-value=0.089 Score=44.71 Aligned_cols=28 Identities=21% Similarity=0.144 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|.++.|||
T Consensus 117 ~~~~i~~~l~~lH~~~i~H~dlkp~Nil 144 (272)
T cd05075 117 FMTDIASGMEYLSSKSFIHRDLAARNCM 144 (272)
T ss_pred HHHHHHHHHHHHHHCCeeccccchhheE
Confidence 3467899999999999999999999987
No 73
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=91.44 E-value=0.079 Score=51.68 Aligned_cols=31 Identities=6% Similarity=0.071 Sum_probs=27.9
Q ss_pred CcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 222 SVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 222 ~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+--||+-+|||+|+..|+|||.|++|||
T Consensus 127 ~q~f~YQiLrgLKyiHSAnViHRDLKPsNll 157 (359)
T KOG0660|consen 127 AQYFLYQILRGLKYIHSANVIHRDLKPSNLL 157 (359)
T ss_pred HHHHHHHHHHhcchhhcccccccccchhhee
Confidence 3456679999999999999999999999997
No 74
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=91.40 E-value=0.097 Score=46.11 Aligned_cols=28 Identities=7% Similarity=0.000 Sum_probs=25.6
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|||.++.|||
T Consensus 109 ~~~qi~~aL~~lH~~~ivH~dlkp~Nil 136 (309)
T cd07872 109 FLYQILRGLAYCHRRKVLHRDLKPQNLL 136 (309)
T ss_pred HHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence 4568999999999999999999999985
No 75
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=91.38 E-value=0.091 Score=46.88 Aligned_cols=27 Identities=7% Similarity=0.127 Sum_probs=25.3
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||++.|+|+|+++.|||
T Consensus 107 ~~qi~~aL~~LH~~giiH~Dlkp~NIl 133 (350)
T cd05573 107 IAELVLALDSVHKLGFIHRDIKPDNIL 133 (350)
T ss_pred HHHHHHHHHHHHHCCeeccCCCHHHeE
Confidence 468999999999999999999999996
No 76
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=91.37 E-value=0.092 Score=47.48 Aligned_cols=28 Identities=4% Similarity=0.033 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|+|+++.|||
T Consensus 106 ~~~qi~~aL~~lH~~~ivH~Dlkp~NIl 133 (364)
T cd05599 106 YIAETILAIDSIHKLGYIHRDIKPDNLL 133 (364)
T ss_pred HHHHHHHHHHHHHHCCeEeccCCHHHeE
Confidence 4478999999999999999999999996
No 77
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=91.28 E-value=0.093 Score=46.94 Aligned_cols=28 Identities=18% Similarity=0.118 Sum_probs=25.8
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|.++.|||
T Consensus 101 ~~~qi~~al~~lH~~givH~Dlkp~NIl 128 (325)
T cd05604 101 YAAEIASALGYLHSINIVYRDLKPENIL 128 (325)
T ss_pred HHHHHHHHHHHHHHCCeeecCCCHHHeE
Confidence 4578999999999999999999999986
No 78
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=91.24 E-value=0.1 Score=45.77 Aligned_cols=29 Identities=14% Similarity=0.094 Sum_probs=26.6
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||+..|+|+|.+++|||
T Consensus 142 ~i~~~i~~al~~lH~~~ivH~dlkp~Nil 170 (304)
T cd05096 142 HVALQIASGMKYLSSLNFVHRDLATRNCL 170 (304)
T ss_pred HHHHHHHHHHHHHHHCCccccCcchhheE
Confidence 45678999999999999999999999997
No 79
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=91.22 E-value=0.097 Score=48.02 Aligned_cols=27 Identities=4% Similarity=0.097 Sum_probs=25.4
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||++.|+|||+|+.|||
T Consensus 107 ~~qi~~al~~lH~~~ivHrDlKp~NIL 133 (382)
T cd05625 107 IAELTCAVESVHKMGFIHRDIKPDNIL 133 (382)
T ss_pred HHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 468999999999999999999999997
No 80
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=91.20 E-value=0.099 Score=47.09 Aligned_cols=27 Identities=4% Similarity=0.114 Sum_probs=25.3
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||++.|+|+|+++.|||
T Consensus 124 ~~qi~~aL~~LH~~~ivH~dlkp~NIl 150 (329)
T PTZ00263 124 HAELVLAFEYLHSKDIIYRDLKPENLL 150 (329)
T ss_pred HHHHHHHHHHHHHCCeeecCCCHHHEE
Confidence 468999999999999999999999986
No 81
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=91.14 E-value=0.1 Score=46.69 Aligned_cols=30 Identities=13% Similarity=0.018 Sum_probs=26.9
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||++.|+|||.++.|||
T Consensus 104 ~~~~~qi~~aL~~LH~~~ivHrDlkp~Nil 133 (323)
T cd05616 104 VFYAAEIAIGLFFLHSKGIIYRDLKLDNVM 133 (323)
T ss_pred HHHHHHHHHHHHHHHHCCEEecCCCHHHeE
Confidence 345678999999999999999999999985
No 82
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=91.07 E-value=0.1 Score=46.67 Aligned_cols=28 Identities=14% Similarity=0.138 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|+++.|||
T Consensus 101 ~~~qi~~al~~LH~~~ivH~dlkp~Nil 128 (316)
T cd05592 101 YAAEIICGLQFLHKKGIIYRDLKLDNVL 128 (316)
T ss_pred HHHHHHHHHHHHHHCCEEeCCCCHHHeE
Confidence 3578999999999999999999999996
No 83
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=91.03 E-value=0.1 Score=47.34 Aligned_cols=29 Identities=10% Similarity=0.190 Sum_probs=26.2
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||++.|+|+|.++.|||
T Consensus 172 ~i~~qi~~aL~~LH~~~ivHrDlkp~NIl 200 (353)
T PLN00034 172 DVARQILSGIAYLHRRHIVHRDIKPSNLL 200 (353)
T ss_pred HHHHHHHHHHHHHHHCCEeecCCCHHHEE
Confidence 34578999999999999999999999996
No 84
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=91.03 E-value=0.097 Score=53.42 Aligned_cols=34 Identities=9% Similarity=0.047 Sum_probs=29.7
Q ss_pred CCCCcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 219 HGQSVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 219 ~~~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.+|--....||+.+|+|+|++.|.|||+|++|||
T Consensus 217 ~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiL 250 (560)
T KOG0600|consen 217 EPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNIL 250 (560)
T ss_pred hHHHHHHHHHHHHHHHHHhhcCeeeccccccceE
Confidence 3445556679999999999999999999999997
No 85
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=91.02 E-value=0.12 Score=46.34 Aligned_cols=29 Identities=10% Similarity=0.119 Sum_probs=26.1
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|++||++.|+|+|.++.|||
T Consensus 109 ~~~~qi~~aL~~LH~~givH~dlkp~Nil 137 (332)
T cd07857 109 SFIYQILCGLKYIHSANVLHRDLKPGNLL 137 (332)
T ss_pred HHHHHHHHHHHHHHhCCcccCCCCHHHeE
Confidence 34578999999999999999999999985
No 86
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=91.00 E-value=0.1 Score=44.92 Aligned_cols=28 Identities=14% Similarity=0.134 Sum_probs=25.6
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|+|.+++||+
T Consensus 129 ~~~ql~~aL~~lH~~gi~H~dlkp~Nil 156 (283)
T cd05091 129 IVTQIAAGMEFLSSHHVVHKDLATRNVL 156 (283)
T ss_pred HHHHHHHHHHHHHHcCccccccchhheE
Confidence 3468999999999999999999999996
No 87
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=90.99 E-value=0.097 Score=45.04 Aligned_cols=27 Identities=7% Similarity=0.076 Sum_probs=25.0
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||++.|+|+|++++|||
T Consensus 105 ~~~i~~al~~lH~~~i~H~dikp~nil 131 (268)
T cd05086 105 ACEIAAGVTHMHKHNFLHSDLALRNCF 131 (268)
T ss_pred HHHHHHHHHHHHHCCeeccCCccceEE
Confidence 468999999999999999999999986
No 88
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=90.93 E-value=0.11 Score=44.78 Aligned_cols=32 Identities=13% Similarity=0.129 Sum_probs=28.2
Q ss_pred CcchhHHHHHHhhhhccccccccCcchhhhHh
Q 024658 222 SVSRSTAIISSLRGLQNQTMTDQGDAAAAITG 253 (264)
Q Consensus 222 ~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~~ 253 (264)
..+...+|+.+|.+||++.|+|+|.++.|||=
T Consensus 107 ~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill 138 (262)
T cd05077 107 KFKVAKQLASALSYLEDKDLVHGNVCTKNILL 138 (262)
T ss_pred HHHHHHHHHHHHHHhhhCCeECCCCCcccEEE
Confidence 34556899999999999999999999999874
No 89
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=90.92 E-value=0.12 Score=45.04 Aligned_cols=29 Identities=17% Similarity=0.188 Sum_probs=26.4
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.++.||+
T Consensus 101 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nil 129 (280)
T cd05608 101 FYTAQIISGLEHLHQRRIIYRDLKPENVL 129 (280)
T ss_pred HHHHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence 45578999999999999999999999986
No 90
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=90.91 E-value=0.1 Score=46.55 Aligned_cols=27 Identities=0% Similarity=0.103 Sum_probs=25.1
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|++||++.|+|||.++.|||
T Consensus 108 ~~qi~~aL~~lH~~~i~H~Dlkp~NIl 134 (330)
T cd05601 108 LAELVLAIHSVHQMGYVHRDIKPENVL 134 (330)
T ss_pred HHHHHHHHHHHHHCCeEcccCchHheE
Confidence 468999999999999999999999996
No 91
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=90.91 E-value=0.11 Score=46.57 Aligned_cols=28 Identities=18% Similarity=0.101 Sum_probs=25.8
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|.++.|||
T Consensus 105 ~~~qi~~~l~~lH~~~ivH~dlkp~Nil 132 (323)
T cd05584 105 YLSEISLALEHLHQQGIIYRDLKPENIL 132 (323)
T ss_pred HHHHHHHHHHHHHHCCeecCCCCHHHeE
Confidence 3568999999999999999999999997
No 92
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=90.83 E-value=0.11 Score=47.11 Aligned_cols=28 Identities=7% Similarity=0.156 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|+|+++.|||
T Consensus 131 ~~~qi~~aL~~LH~~~ivH~Dlkp~NIl 158 (364)
T cd07875 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIV 158 (364)
T ss_pred HHHHHHHHHHHHhhCCeecCCCCHHHEE
Confidence 3578999999999999999999999986
No 93
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=90.77 E-value=0.072 Score=56.43 Aligned_cols=48 Identities=17% Similarity=0.133 Sum_probs=39.4
Q ss_pred HHhhhhcccCCCCCCCCCCCCCccccCCCCcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 193 EEAAASMSSYRPLKQPRPTISDCDRDHGQSVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 193 ~~~~~s~~s~Rplk~~~i~~~~~v~~~~~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+.|+.=-|+|++.-|- .| -.++++.|++||++.|||||.|+.|||
T Consensus 115 AVDaimlEL~r~LtE~QIq---vv---------c~q~ldALn~LHs~~iIHRDLKAGNiL 162 (1187)
T KOG0579|consen 115 AVDAIMLELGRVLTEDQIQ---VV---------CYQVLDALNWLHSQNIIHRDLKAGNIL 162 (1187)
T ss_pred hHhHHHHHhccccchHHHH---HH---------HHHHHHHHHHHhhcchhhhhccccceE
Confidence 3467788888999987761 11 357899999999999999999999997
No 94
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=90.71 E-value=0.11 Score=44.43 Aligned_cols=30 Identities=23% Similarity=0.180 Sum_probs=26.5
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||++.|+|+|.++.||+
T Consensus 120 ~~~~~~l~~~l~~LH~~~i~H~dlkp~Nil 149 (275)
T cd05046 120 VALCTQIALGMDHLSNARFVHRDLAARNCL 149 (275)
T ss_pred HHHHHHHHHHHHHhhhcCcccCcCccceEE
Confidence 345578999999999999999999999976
No 95
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=90.71 E-value=0.12 Score=47.84 Aligned_cols=27 Identities=4% Similarity=0.186 Sum_probs=25.2
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||++.|+|||.++.|||
T Consensus 148 ~~qi~~aL~~LH~~~ivHrDLkp~NIL 174 (370)
T cd05596 148 TAEVVLALDAIHSMGFIHRDVKPDNML 174 (370)
T ss_pred HHHHHHHHHHHHHCCeeccCCCHHHEE
Confidence 468999999999999999999999986
No 96
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=90.70 E-value=0.12 Score=46.38 Aligned_cols=29 Identities=14% Similarity=0.060 Sum_probs=26.3
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||++.|+|||+++.|||
T Consensus 100 ~~~~ql~~~L~~lH~~~ivH~dlkp~NIl 128 (320)
T cd05590 100 FYAAEITSALMFLHDKGIIYRDLKLDNVL 128 (320)
T ss_pred HHHHHHHHHHHHHHHCCeEeCCCCHHHeE
Confidence 34578999999999999999999999996
No 97
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=90.66 E-value=0.11 Score=48.03 Aligned_cols=28 Identities=4% Similarity=0.158 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|||.|+.|||
T Consensus 147 ~~~qi~~aL~~LH~~~ivHrDLkp~NIl 174 (371)
T cd05622 147 YTAEVVLALDAIHSMGFIHRDVKPDNML 174 (371)
T ss_pred HHHHHHHHHHHHHHCCEEeCCCCHHHEE
Confidence 3468999999999999999999999996
No 98
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=90.63 E-value=0.092 Score=53.68 Aligned_cols=35 Identities=17% Similarity=0.186 Sum_probs=29.0
Q ss_pred CCCCcchhHHHHHHhhhhccccccccCcchhhhHh
Q 024658 219 HGQSVSRSTAIISSLRGLQNQTMTDQGDAAAAITG 253 (264)
Q Consensus 219 ~~~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~~ 253 (264)
-+|--.-.++|+.+|++||++.|||||+|+-+||.
T Consensus 368 E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL 402 (550)
T KOG0578|consen 368 EGQIAAICREILQGLKFLHARGIIHRDIKSDNILL 402 (550)
T ss_pred HHHHHHHHHHHHHHHHHHHhcceeeeccccceeEe
Confidence 34444456778899999999999999999999975
No 99
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=90.61 E-value=0.12 Score=45.98 Aligned_cols=28 Identities=11% Similarity=0.031 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|.++.|||
T Consensus 103 ~~~qi~~~l~~lH~~~i~H~dlkp~Nil 130 (318)
T cd05582 103 YLAELALALDHLHSLGIIYRDLKPENIL 130 (318)
T ss_pred HHHHHHHHHHHHHHCCEecCCCCHHHeE
Confidence 3468999999999999999999999986
No 100
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=90.54 E-value=0.12 Score=47.26 Aligned_cols=29 Identities=10% Similarity=0.041 Sum_probs=26.5
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|||.++.|||
T Consensus 135 ~~~~qi~~aL~~LH~~~ivHrDLkp~NIL 163 (340)
T PTZ00426 135 FYAAQIVLIFEYLQSLNIVYRDLKPENLL 163 (340)
T ss_pred HHHHHHHHHHHHHHHCCeEccCCCHHHEE
Confidence 34678999999999999999999999997
No 101
>PHA03211 serine/threonine kinase US3; Provisional
Probab=90.50 E-value=0.12 Score=50.61 Aligned_cols=28 Identities=4% Similarity=0.156 Sum_probs=25.4
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|+|+|++|||
T Consensus 265 i~~qi~~aL~yLH~~gIvHrDLKP~NIL 292 (461)
T PHA03211 265 VARQLLSAIDYIHGEGIIHRDIKTENVL 292 (461)
T ss_pred HHHHHHHHHHHHHHCCEEECcCCHHHEE
Confidence 3467889999999999999999999986
No 102
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=90.45 E-value=0.13 Score=44.28 Aligned_cols=30 Identities=13% Similarity=0.121 Sum_probs=26.7
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..-..+|+.+|.+||+..|+|+|.+++||+
T Consensus 111 ~~~~~~l~~aL~~LH~~~i~H~dlkp~nil 140 (284)
T cd05081 111 LLYASQICKGMEYLGSKRYVHRDLATRNIL 140 (284)
T ss_pred HHHHHHHHHHHHHHHHCCceeccCCHhhEE
Confidence 344578999999999999999999999985
No 103
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=90.40 E-value=0.12 Score=46.92 Aligned_cols=28 Identities=0% Similarity=0.044 Sum_probs=25.8
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|||.|+.|||
T Consensus 106 ~~~qi~~~L~~lH~~givHrDLkp~NIl 133 (360)
T cd05627 106 YIAETVLAIDAIHQLGFIHRDIKPDNLL 133 (360)
T ss_pred HHHHHHHHHHHHHHCCeEccCCCHHHEE
Confidence 4578999999999999999999999996
No 104
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=90.39 E-value=0.1 Score=50.77 Aligned_cols=28 Identities=11% Similarity=0.126 Sum_probs=25.2
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+--+|+.+|||||+..|.|||+|+.|+|
T Consensus 161 FlYQILRGLKYLHsA~ILHRDIKPGNLL 188 (449)
T KOG0664|consen 161 FVYQILRGLKYLHTANILHRDIKPGNLL 188 (449)
T ss_pred hHHHHHhhhHHHhhcchhhccCCCccEE
Confidence 4579999999999999999999998854
No 105
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=90.39 E-value=0.13 Score=43.65 Aligned_cols=31 Identities=10% Similarity=0.133 Sum_probs=27.2
Q ss_pred CcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 222 SVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 222 ~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+...+|+.+|.+||++.|+|+|.++.||+
T Consensus 87 ~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil 117 (237)
T cd05576 87 VKRWAAEMVVALDALHREGIVCRDLNPNNIL 117 (237)
T ss_pred HHHHHHHHHHHHHHHHhCCeeccCCCHHHEE
Confidence 3455678999999999999999999999986
No 106
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=90.31 E-value=0.12 Score=47.97 Aligned_cols=29 Identities=14% Similarity=0.120 Sum_probs=26.4
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+-..+|+.+|.+||++.|+|||.+++|||
T Consensus 216 ~i~~qi~~aL~yLH~~giiHrDLkp~Nil 244 (374)
T cd05106 216 RFSSQVAQGMDFLASKNCIHRDVAARNVL 244 (374)
T ss_pred HHHHHHHHHHHHHHHCCEEeccCchheEE
Confidence 44578999999999999999999999986
No 107
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=90.25 E-value=0.12 Score=44.38 Aligned_cols=31 Identities=16% Similarity=0.169 Sum_probs=27.5
Q ss_pred CcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 222 SVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 222 ~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
......+|+.+|.+||++.|+|+|.++.|||
T Consensus 109 ~~~~~~~i~~al~~lH~~~iiH~dikp~nil 139 (266)
T cd05064 109 LMGMLPGLASGMKYLSEMGYVHKGLAAHKVL 139 (266)
T ss_pred HHHHHHHHHHHHHHHHHCCEeeccccHhhEE
Confidence 3455678999999999999999999999986
No 108
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=90.23 E-value=0.14 Score=44.22 Aligned_cols=29 Identities=7% Similarity=0.082 Sum_probs=26.2
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||+..|+|+|.++.||+
T Consensus 104 ~~~~qi~~~L~~lH~~~i~H~dlkp~Nil 132 (287)
T cd07848 104 SYIYQLIKAIHWCHKNDIVHRDIKPENLL 132 (287)
T ss_pred HHHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence 34578999999999999999999999986
No 109
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=90.19 E-value=0.14 Score=45.77 Aligned_cols=28 Identities=4% Similarity=0.051 Sum_probs=25.9
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||.+.|+|+|.++.|||
T Consensus 106 ~~~qi~~~l~~lH~~~ivH~dlkp~Nil 133 (333)
T cd05600 106 YMAEMFEAVDALHELGYIHRDLKPENFL 133 (333)
T ss_pred HHHHHHHHHHHHHHCCccccCCCHHHEE
Confidence 4578999999999999999999999996
No 110
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=90.19 E-value=0.12 Score=49.61 Aligned_cols=30 Identities=10% Similarity=0.121 Sum_probs=26.7
Q ss_pred cchhHHHHHHhhhhcccc-ccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQT-MTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~-i~~~d~~~a~i~ 252 (264)
....-+|..+++|||++. |||||.|+.|||
T Consensus 145 l~~aldiArGm~YLH~~~~iIHrDLK~~NiL 175 (362)
T KOG0192|consen 145 LRIALDIARGMEYLHSEGPIIHRDLKSDNIL 175 (362)
T ss_pred HHHHHHHHHHHHHHhcCCCeeecccChhhEE
Confidence 355568889999999999 999999999997
No 111
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=90.18 E-value=0.14 Score=46.23 Aligned_cols=28 Identities=0% Similarity=0.054 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|||.++.|||
T Consensus 107 ~~~qi~~~l~~lH~~~ivH~dlkp~Nil 134 (331)
T cd05597 107 YLAEMVLAIDSVHQLGYVHRDIKPDNVL 134 (331)
T ss_pred HHHHHHHHHHHHHhCCeEECCCCHHHEE
Confidence 4578999999999999999999999985
No 112
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=90.16 E-value=0.13 Score=43.78 Aligned_cols=31 Identities=19% Similarity=0.073 Sum_probs=27.1
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhHh
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAITG 253 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~~ 253 (264)
.....+|+.+|.+||+..|+|+|.+++|||-
T Consensus 116 ~~~~~~i~~~l~~lH~~~i~H~dikp~nili 146 (273)
T cd05074 116 VRFMIDIASGMEYLSSKNFIHRDLAARNCML 146 (273)
T ss_pred HHHHHHHHHHHHHHHhCCEeecccchhhEEE
Confidence 3445789999999999999999999999873
No 113
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=90.16 E-value=0.13 Score=43.57 Aligned_cols=28 Identities=18% Similarity=0.086 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|.++.||+
T Consensus 118 ~~~~i~~aL~~lH~~~i~H~dlkp~Nil 145 (273)
T cd05035 118 FMVDIALGMEYLSNRNFIHRDLAARNCM 145 (273)
T ss_pred HHHHHHHHHHHHHhCCeeccccchheEE
Confidence 3478999999999999999999999986
No 114
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=90.11 E-value=0.14 Score=45.82 Aligned_cols=31 Identities=10% Similarity=0.127 Sum_probs=27.1
Q ss_pred CcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 222 SVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 222 ~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
......+|+.+|++||++.|+|||.++.|||
T Consensus 103 ~~~~~~qi~~al~~lH~~~ivHrdlkp~Nil 133 (324)
T cd05589 103 AVFYAACVVLGLQYLHENKIVYRDLKLDNLL 133 (324)
T ss_pred HHHHHHHHHHHHHHHHhCCeEecCCCHHHeE
Confidence 3345678999999999999999999999985
No 115
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=90.02 E-value=0.13 Score=46.28 Aligned_cols=27 Identities=0% Similarity=0.115 Sum_probs=25.1
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||++.|+|+|.|+.|||
T Consensus 108 ~~qi~~~L~~lH~~~iiHrDlkp~Nil 134 (331)
T cd05624 108 IAEMVLAIHSIHQLHYVHRDIKPDNVL 134 (331)
T ss_pred HHHHHHHHHHHHHCCeeeccCchHHEE
Confidence 468999999999999999999999986
No 116
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=90.02 E-value=0.14 Score=44.66 Aligned_cols=29 Identities=24% Similarity=0.192 Sum_probs=26.1
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|+++.|||
T Consensus 101 ~i~~qi~~al~~lH~~~ivH~dikp~Nil 129 (279)
T cd05633 101 FYATEIILGLEHMHNRFVVYRDLKPANIL 129 (279)
T ss_pred HHHHHHHHHHHHHHHCCcCCCCCCHHHEE
Confidence 34578999999999999999999999986
No 117
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=90.00 E-value=0.15 Score=45.55 Aligned_cols=29 Identities=10% Similarity=0.067 Sum_probs=26.3
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|++||++.|+|+|.++.|||
T Consensus 100 ~~~~qi~~~l~~LH~~~ivH~dlkp~Nil 128 (318)
T cd05570 100 FYAAEIVLGLQFLHERGIIYRDLKLDNVL 128 (318)
T ss_pred HHHHHHHHHHHHHHhCCeEccCCCHHHeE
Confidence 34578999999999999999999999987
No 118
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=89.97 E-value=0.15 Score=46.13 Aligned_cols=29 Identities=14% Similarity=0.031 Sum_probs=26.1
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|||+++.|||
T Consensus 100 ~i~~qi~~~l~~lH~~~ivH~Dikp~Nil 128 (329)
T cd05618 100 FYSAEISLALNYLHERGIIYRDLKLDNVL 128 (329)
T ss_pred HHHHHHHHHHHHHHHCCeeeCCCCHHHEE
Confidence 34568999999999999999999999986
No 119
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=89.94 E-value=0.14 Score=46.09 Aligned_cols=28 Identities=4% Similarity=0.077 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|||.|+.|||
T Consensus 107 ~~~qi~~al~~lH~~~iiHrDlkp~Nil 134 (332)
T cd05623 107 YLAEMVIAIDSVHQLHYVHRDIKPDNIL 134 (332)
T ss_pred HHHHHHHHHHHHHHCCeEecCCCHHHEE
Confidence 3468999999999999999999999986
No 120
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=89.93 E-value=0.14 Score=49.39 Aligned_cols=29 Identities=10% Similarity=0.088 Sum_probs=27.1
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+...||+.+|.+||+..|+|||.|+.|||
T Consensus 124 ~~m~Qll~gl~~~H~~~IlHRDLKPQNlL 152 (323)
T KOG0594|consen 124 SFMRQLLRGLAFLHSHGILHRDLKPQNLL 152 (323)
T ss_pred HHHHHHHHHHHHHHhCCeecccCCcceEE
Confidence 55689999999999999999999999996
No 121
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=89.93 E-value=0.15 Score=45.75 Aligned_cols=28 Identities=18% Similarity=0.157 Sum_probs=25.9
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|||+++.|||
T Consensus 101 ~~~qi~~al~~LH~~~ivHrdikp~Nil 128 (316)
T cd05619 101 YAAEIICGLQFLHSKGIVYRDLKLDNIL 128 (316)
T ss_pred HHHHHHHHHHHHHhCCeEeCCCCHHHEE
Confidence 4578999999999999999999999996
No 122
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=89.90 E-value=0.13 Score=44.58 Aligned_cols=28 Identities=21% Similarity=0.190 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|.+++|||
T Consensus 114 i~~qi~~~l~~lH~~~iiH~dlkp~nil 141 (279)
T cd05111 114 WCVQIAKGMYYLEEHRMVHRNLAARNIL 141 (279)
T ss_pred HHHHHHHHHHHHHHCCEeccccCcceEE
Confidence 4468999999999999999999999986
No 123
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=89.88 E-value=0.15 Score=42.27 Aligned_cols=30 Identities=17% Similarity=0.129 Sum_probs=26.7
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||++.|+|+|.++.|||
T Consensus 108 ~~~~~~l~~al~~lH~~~i~H~di~p~nil 137 (262)
T cd00192 108 LSFAIQIAKGMEYLASKKFVHRDLAARNCL 137 (262)
T ss_pred HHHHHHHHHHHHHHHcCCcccCccCcceEE
Confidence 345578999999999999999999999986
No 124
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=89.77 E-value=0.16 Score=45.75 Aligned_cols=29 Identities=10% Similarity=0.016 Sum_probs=26.2
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.++.|||
T Consensus 100 ~~~~qi~~al~~lH~~~ivHrDlkp~Nil 128 (327)
T cd05617 100 FYAAEICIALNFLHERGIIYRDLKLDNVL 128 (327)
T ss_pred HHHHHHHHHHHHHHHCCeeccCCCHHHEE
Confidence 34578999999999999999999999986
No 125
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=89.76 E-value=0.13 Score=44.30 Aligned_cols=29 Identities=17% Similarity=0.102 Sum_probs=26.1
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||++.|+|+|.+++|||
T Consensus 111 ~i~~~l~~~l~~lH~~~i~H~dlkp~Nil 139 (283)
T cd05080 111 LFAQQICEGMAYLHSQHYIHRDLAARNVL 139 (283)
T ss_pred HHHHHHHHHHHHHHHCCeeccccChheEE
Confidence 34568999999999999999999999987
No 126
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=89.70 E-value=0.16 Score=43.49 Aligned_cols=30 Identities=7% Similarity=-0.015 Sum_probs=26.9
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||++.|+|+|.++.|||
T Consensus 104 ~~~~~qi~~~L~~lH~~~i~H~dl~p~nil 133 (285)
T cd07861 104 KSYLYQILQGILFCHSRRVLHRDLKPQNLL 133 (285)
T ss_pred HHHHHHHHHHHHHHHhCCeeecCCCHHHEE
Confidence 345689999999999999999999999985
No 127
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=89.66 E-value=0.16 Score=43.92 Aligned_cols=27 Identities=22% Similarity=0.218 Sum_probs=25.1
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||+..|+|+|.+++|||
T Consensus 136 ~~~i~~al~~LH~~~i~H~dlkp~Nil 162 (296)
T cd05051 136 ATQIASGMRYLESLNFVHRDLATRNCL 162 (296)
T ss_pred HHHHHHHHHHHHHcCccccccchhcee
Confidence 468999999999999999999999987
No 128
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=89.64 E-value=0.15 Score=44.75 Aligned_cols=28 Identities=11% Similarity=0.179 Sum_probs=25.4
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|++||+..|+|+|+++.|||
T Consensus 124 i~~qi~~al~~lH~~~ivH~dlkp~Nil 151 (297)
T cd05089 124 FASDVATGMQYLSEKQFIHRDLAARNVL 151 (297)
T ss_pred HHHHHHHHHHHHHHCCcccCcCCcceEE
Confidence 4468999999999999999999999985
No 129
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=89.64 E-value=0.14 Score=45.74 Aligned_cols=28 Identities=14% Similarity=0.170 Sum_probs=24.9
Q ss_pred hhHHHHHHhhhhcc-ccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQN-QTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~-~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+ +.|+|+|+++.|||
T Consensus 100 ~~~qi~~aL~~lH~~~~ivHrDikp~NIl 128 (325)
T cd05594 100 YGAEIVSALDYLHSEKNVVYRDLKLENLM 128 (325)
T ss_pred HHHHHHHHHHHHHhcCCEEecCCCCCeEE
Confidence 34689999999997 79999999999995
No 130
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=89.61 E-value=0.17 Score=43.42 Aligned_cols=28 Identities=14% Similarity=0.102 Sum_probs=24.7
Q ss_pred hhHHHHHHhhhh-ccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGL-QNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l-~~~~i~~~d~~~a~i~ 252 (264)
-..+|+..|.+| |+..|+|||.|++|||
T Consensus 122 i~~qi~~~L~~l~H~~giiHrDlkP~NIl 150 (190)
T cd05147 122 LYLQVIQIMRILYQDCRLVHADLSEYNLL 150 (190)
T ss_pred HHHHHHHHHHHHHHhCCcccCCCCHHHEE
Confidence 346788999999 7999999999999996
No 131
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=89.61 E-value=0.14 Score=44.77 Aligned_cols=28 Identities=11% Similarity=0.164 Sum_probs=25.4
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|++||++.|+|+|.++.||+
T Consensus 106 ~~~~l~~~L~~LH~~~ivH~dlk~~Nil 133 (314)
T cd08216 106 ILKDVLNALDYIHSKGFIHRSVKASHIL 133 (314)
T ss_pred HHHHHHHHHHHHHHCCeecCCCCcceEE
Confidence 3468999999999999999999999986
No 132
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=89.54 E-value=0.17 Score=42.67 Aligned_cols=30 Identities=10% Similarity=0.059 Sum_probs=26.4
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||++.|+|+|.++.||+
T Consensus 97 ~~~~~qi~~~L~~lH~~~i~H~dl~p~nil 126 (252)
T cd05084 97 IQMVENAAAGMEYLESKHCIHRDLAARNCL 126 (252)
T ss_pred HHHHHHHHHHHHHHHhCCccccccchheEE
Confidence 345578999999999999999999999975
No 133
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=89.54 E-value=0.16 Score=44.27 Aligned_cols=30 Identities=13% Similarity=0.168 Sum_probs=26.6
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||++.|+|+|.++.||+
T Consensus 105 ~~~~~ql~~~l~~lH~~~iiH~dikp~Nil 134 (285)
T cd05632 105 LFYAAEILCGLEDLHRENTVYRDLKPENIL 134 (285)
T ss_pred HHHHHHHHHHHHHHHhCCeeecCCCHHHEE
Confidence 345578999999999999999999999987
No 134
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=89.50 E-value=0.13 Score=44.41 Aligned_cols=28 Identities=11% Similarity=0.059 Sum_probs=25.6
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|++||++.|+|+|.+++|||
T Consensus 137 i~~qi~~al~~LH~~~ivH~dlkp~Nil 164 (293)
T cd05053 137 FAYQVARGMEFLASKKCIHRDLAARNVL 164 (293)
T ss_pred HHHHHHHHHHHHHHCCccccccceeeEE
Confidence 4568999999999999999999999985
No 135
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=89.40 E-value=0.15 Score=43.44 Aligned_cols=28 Identities=21% Similarity=0.185 Sum_probs=25.8
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|.++.|||
T Consensus 109 ~~~ql~~~l~~lH~~~i~H~dlkp~nil 136 (263)
T cd05052 109 MATQISSAMEYLEKKNFIHRDLAARNCL 136 (263)
T ss_pred HHHHHHHHHHHHHhCCEeecccCcceEE
Confidence 3578999999999999999999999987
No 136
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=89.37 E-value=0.17 Score=42.28 Aligned_cols=30 Identities=13% Similarity=0.174 Sum_probs=26.7
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..-..+|+.+|.+||++.|+|+|+++.||+
T Consensus 101 ~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl 130 (260)
T PF00069_consen 101 LKIAYQILEALAYLHSKGIVHRDIKPENIL 130 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTEEESSBSGGGEE
T ss_pred cccccccccccccccccccccccccccccc
Confidence 344578999999999999999999999996
No 137
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=89.27 E-value=0.16 Score=44.29 Aligned_cols=30 Identities=17% Similarity=0.120 Sum_probs=26.5
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..-..+|+.+|.+||++.|+|+|.+++|||
T Consensus 126 ~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 155 (291)
T cd05094 126 LHIASQIASGMVYLASQHFVHRDLATRNCL 155 (291)
T ss_pred HHHHHHHHHHHHHHHhCCeeecccCcceEE
Confidence 344578999999999999999999999986
No 138
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=89.22 E-value=0.16 Score=43.49 Aligned_cols=28 Identities=14% Similarity=0.108 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|+|.+++||+
T Consensus 129 ~~~~l~~al~~lH~~~i~H~dlkp~Nil 156 (283)
T cd05048 129 IAIQIAAGMEYLSSHHFVHRDLAARNCL 156 (283)
T ss_pred HHHHHHHHHHHHHhCCeeccccccceEE
Confidence 4578999999999999999999999986
No 139
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=89.21 E-value=0.18 Score=43.50 Aligned_cols=32 Identities=3% Similarity=-0.014 Sum_probs=27.7
Q ss_pred CCcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 221 QSVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 221 ~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+......+|+.+|.+||++.|+|++.++.||+
T Consensus 111 ~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil 142 (295)
T cd07837 111 TIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLL 142 (295)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeecCCChHHEE
Confidence 33455678999999999999999999999985
No 140
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=89.15 E-value=0.19 Score=45.32 Aligned_cols=29 Identities=14% Similarity=0.017 Sum_probs=26.4
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||.+.|+|||.++.|||
T Consensus 100 ~~~~qi~~~l~~lH~~~ivH~dlkp~Nil 128 (329)
T cd05588 100 FYSAEISLALNFLHERGIIYRDLKLDNVL 128 (329)
T ss_pred HHHHHHHHHHHHHHHCCeEecCCCHHHeE
Confidence 44578999999999999999999999986
No 141
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=89.11 E-value=0.19 Score=43.13 Aligned_cols=32 Identities=6% Similarity=-0.035 Sum_probs=27.8
Q ss_pred CCcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 221 QSVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 221 ~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+..+...+|+.+|.+||++.|+|+|.++.||+
T Consensus 100 ~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil 131 (284)
T cd07839 100 IVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLL 131 (284)
T ss_pred HHHHHHHHHHHHHHHHHHCCEecCCCCHHHEE
Confidence 33456688999999999999999999999985
No 142
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=89.09 E-value=0.17 Score=44.39 Aligned_cols=28 Identities=14% Similarity=0.105 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||+..|+|+|.++.|||
T Consensus 142 ~~~qi~~al~~LH~~givH~dlkp~Nil 169 (304)
T cd05101 142 CTYQVARGMEYLASQKCIHRDLAARNVL 169 (304)
T ss_pred HHHHHHHHHHHHHHCCeeecccccceEE
Confidence 3568999999999999999999999986
No 143
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=89.08 E-value=0.17 Score=42.94 Aligned_cols=28 Identities=14% Similarity=0.143 Sum_probs=25.3
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|+|.+++||+
T Consensus 107 ~~~~i~~~l~~lH~~~i~H~dlkp~nil 134 (256)
T cd05082 107 FSLDVCEAMEYLEANNFVHRDLAARNVL 134 (256)
T ss_pred HHHHHHHHHHHHHhCCEeccccchheEE
Confidence 3468899999999999999999999986
No 144
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=89.06 E-value=0.17 Score=48.80 Aligned_cols=28 Identities=18% Similarity=0.165 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|||+|+.|||
T Consensus 174 i~~qi~~aL~~lH~~~ivHrDlkp~NIl 201 (478)
T PTZ00267 174 LFYQIVLALDEVHSRKMMHRDLKSANIF 201 (478)
T ss_pred HHHHHHHHHHHHHhCCEEECCcCHHhEE
Confidence 3468999999999999999999999995
No 145
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=89.06 E-value=0.18 Score=43.93 Aligned_cols=31 Identities=13% Similarity=0.073 Sum_probs=27.3
Q ss_pred CcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 222 SVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 222 ~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
......+|+.+|.+||++.|+|+|.+++|||
T Consensus 122 ~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nil 152 (288)
T cd05093 122 MLHIAQQIAAGMVYLASQHFVHRDLATRNCL 152 (288)
T ss_pred HHHHHHHHHHHHHHHHhCCeeecccCcceEE
Confidence 3445678999999999999999999999986
No 146
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=89.03 E-value=0.18 Score=42.85 Aligned_cols=29 Identities=10% Similarity=0.125 Sum_probs=26.0
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.++.||+
T Consensus 99 ~i~~qi~~al~~lH~~~i~H~dlkp~nil 127 (257)
T cd05116 99 ELVHQVSMGMKYLEETNFVHRDLAARNVL 127 (257)
T ss_pred HHHHHHHHHHHHHHHCCEeecccchhhEE
Confidence 34568999999999999999999999986
No 147
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=88.98 E-value=0.2 Score=42.79 Aligned_cols=28 Identities=11% Similarity=0.237 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|++.+++||+
T Consensus 113 ~~~qi~~al~~lH~~~i~h~dl~p~nil 140 (268)
T cd06624 113 YTKQILEGLKYLHDNQIVHRDIKGDNVL 140 (268)
T ss_pred HHHHHHHHHHHHHHCCEeecCCCHHHEE
Confidence 3468999999999999999999999987
No 148
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=88.97 E-value=0.2 Score=44.17 Aligned_cols=29 Identities=17% Similarity=0.232 Sum_probs=26.3
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.++.||+
T Consensus 122 ~~~~qi~~~l~~LH~~~ivH~dlkp~Nil 150 (292)
T cd06658 122 TVCLSVLRALSYLHNQGVIHRDIKSDSIL 150 (292)
T ss_pred HHHHHHHHHHHHHHHCCEeecCCCHHHEE
Confidence 45578999999999999999999999986
No 149
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=88.95 E-value=0.19 Score=43.57 Aligned_cols=31 Identities=6% Similarity=0.073 Sum_probs=27.1
Q ss_pred CcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 222 SVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 222 ~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
......+|+.+|.+||++.|+|+|.++.|||
T Consensus 108 ~~~i~~qi~~aL~~LH~~~i~H~dl~p~nil 138 (293)
T cd07843 108 VKCLMLQLLSGVAHLHDNWILHRDLKTSNLL 138 (293)
T ss_pred HHHHHHHHHHHHHHHHHCCeeeccCCHHHEE
Confidence 3345578999999999999999999999985
No 150
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=88.95 E-value=0.19 Score=49.21 Aligned_cols=28 Identities=11% Similarity=0.152 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|||.|++|||
T Consensus 148 i~~qll~aL~~lH~~~IiHrDLKP~NIL 175 (496)
T PTZ00283 148 LFIQVLLAVHHVHSKHMIHRDIKSANIL 175 (496)
T ss_pred HHHHHHHHHHHHHhCCEecCCCCHHHEE
Confidence 3468999999999999999999999985
No 151
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=88.94 E-value=0.22 Score=43.15 Aligned_cols=29 Identities=7% Similarity=0.037 Sum_probs=26.2
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||+..|+|+|.++.|||
T Consensus 107 ~~~~qi~~~L~~lH~~~i~H~dlkp~Nil 135 (291)
T cd07870 107 LFMFQLLRGLAYIHGQHILHRDLKPQNLL 135 (291)
T ss_pred HHHHHHHHHHHHHHhCCcccCCCChHHEE
Confidence 34578999999999999999999999986
No 152
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=88.92 E-value=0.2 Score=45.03 Aligned_cols=30 Identities=13% Similarity=0.009 Sum_probs=26.4
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||++.|+|+|+++.|||
T Consensus 104 ~~i~~qi~~al~~lH~~~ivHrDikp~Nil 133 (323)
T cd05615 104 VFYAAEISVGLFFLHRRGIIYRDLKLDNVM 133 (323)
T ss_pred HHHHHHHHHHHHHHHHCCeeccCCCHHHeE
Confidence 344578999999999999999999999985
No 153
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=88.74 E-value=0.2 Score=43.35 Aligned_cols=29 Identities=14% Similarity=0.069 Sum_probs=26.2
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+...+|+.+|.+||+..|+|+|.++.|||
T Consensus 126 ~~~~qi~~al~~LH~~~i~H~dlkp~nil 154 (280)
T cd05092 126 AIASQIASGMVYLASLHFVHRDLATRNCL 154 (280)
T ss_pred HHHHHHHHHHHHHHHCCeecccccHhhEE
Confidence 34578999999999999999999999987
No 154
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=88.74 E-value=0.2 Score=42.73 Aligned_cols=32 Identities=3% Similarity=-0.105 Sum_probs=27.9
Q ss_pred CCcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 221 QSVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 221 ~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+......+|+.+|.+||++.|+|+|.++.||+
T Consensus 101 ~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil 132 (286)
T cd07847 101 LIKKIIWQTLQAVNFCHKHNCIHRDVKPENIL 132 (286)
T ss_pred HHHHHHHHHHHHHHHHHHCCceecCCChhhEE
Confidence 34455678999999999999999999999987
No 155
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=88.73 E-value=0.17 Score=43.58 Aligned_cols=29 Identities=17% Similarity=0.139 Sum_probs=26.2
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.+++|||
T Consensus 128 ~i~~~i~~al~~lH~~~i~H~dlkp~nil 156 (283)
T cd05090 128 HIAIQIAAGMEYLSSHFFVHKDLAARNIL 156 (283)
T ss_pred HHHHHHHHHHHHHHhcCeehhccccceEE
Confidence 34578999999999999999999999986
No 156
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=88.56 E-value=0.21 Score=46.27 Aligned_cols=29 Identities=21% Similarity=0.107 Sum_probs=26.2
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.++.|||
T Consensus 218 ~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil 246 (375)
T cd05104 218 SFSYQVAKGMSFLASKNCIHRDLAARNIL 246 (375)
T ss_pred HHHHHHHHHHHHHHHCCeeccCCchhhEE
Confidence 44578999999999999999999999986
No 157
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=88.55 E-value=0.2 Score=43.51 Aligned_cols=28 Identities=11% Similarity=0.106 Sum_probs=25.6
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|++||+..|+|+|+++.|||
T Consensus 100 ~~~qi~~al~~lH~~~ivH~dikp~Nil 127 (277)
T cd05607 100 YSAQITCGILHLHSMDIVYRDMKPENVL 127 (277)
T ss_pred HHHHHHHHHHHHHHCCEEEccCChHhEE
Confidence 3468999999999999999999999987
No 158
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=88.49 E-value=0.2 Score=45.59 Aligned_cols=29 Identities=21% Similarity=0.118 Sum_probs=25.9
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.++.||+
T Consensus 177 ~~~~qi~~aL~~lH~~~ivHrDikp~Nil 205 (337)
T cd05054 177 SYSFQVARGMEFLASRKCIHRDLAARNIL 205 (337)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCcceEE
Confidence 34478999999999999999999999984
No 159
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=88.27 E-value=0.21 Score=43.95 Aligned_cols=29 Identities=14% Similarity=0.168 Sum_probs=26.0
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.++.|||
T Consensus 113 ~~~~qi~~~L~~LH~~~ivH~dikp~Nil 141 (303)
T cd05110 113 NWCVQIAKGMMYLEERRLVHRDLAARNVL 141 (303)
T ss_pred HHHHHHHHHHHHHhhcCeeccccccceee
Confidence 34568999999999999999999999986
No 160
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=88.18 E-value=0.18 Score=44.65 Aligned_cols=30 Identities=17% Similarity=0.109 Sum_probs=26.5
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||++.|+|+|.+++|||
T Consensus 144 ~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil 173 (302)
T cd05055 144 LSFSYQVAKGMAFLASKNCIHRDLAARNVL 173 (302)
T ss_pred HHHHHHHHHHHHHHHHCCeehhhhccceEE
Confidence 345578999999999999999999999975
No 161
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=88.18 E-value=0.21 Score=42.06 Aligned_cols=28 Identities=21% Similarity=0.247 Sum_probs=25.4
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|++.+++||+
T Consensus 102 ~~~qi~~~L~~lH~~~i~H~di~p~nil 129 (257)
T cd05040 102 YAVQIANGMRYLESKRFIHRDLAARNIL 129 (257)
T ss_pred HHHHHHHHHHHHHhCCccccccCcccEE
Confidence 3468999999999999999999999976
No 162
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=88.16 E-value=0.2 Score=42.92 Aligned_cols=29 Identities=10% Similarity=0.132 Sum_probs=26.0
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.+++|||
T Consensus 99 ~~~~~i~~~l~~lH~~~i~H~dlkp~nil 127 (257)
T cd05115 99 ELMHQVSMGMKYLEGKNFVHRDLAARNVL 127 (257)
T ss_pred HHHHHHHHHHHHHHhcCeeecccchheEE
Confidence 34568999999999999999999999986
No 163
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=88.15 E-value=0.17 Score=49.75 Aligned_cols=27 Identities=15% Similarity=0.084 Sum_probs=25.2
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
--+|++++.|||+.=|+|||.|+||||
T Consensus 138 lwQil~Gv~YLH~NWvlHRDLKPaNIl 164 (438)
T KOG0666|consen 138 LWQILDGVHYLHSNWVLHRDLKPANIL 164 (438)
T ss_pred HHHHHhhhHHHhhhheeeccCCcceEE
Confidence 358999999999999999999999997
No 164
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=88.15 E-value=0.23 Score=43.93 Aligned_cols=31 Identities=13% Similarity=0.104 Sum_probs=27.2
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhHh
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAITG 253 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~~ 253 (264)
.....+|+.+|++||+..|+|+|.+++|||=
T Consensus 127 ~~~~~qi~~al~~LH~~gi~H~dlkp~Nili 157 (303)
T cd05088 127 LHFAADVARGMDYLSQKQFIHRDLAARNILV 157 (303)
T ss_pred HHHHHHHHHHHHHHHhCCccccccchheEEe
Confidence 3456789999999999999999999999874
No 165
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=88.12 E-value=0.21 Score=43.56 Aligned_cols=29 Identities=17% Similarity=0.111 Sum_probs=26.0
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||++.|+|+|.+++|||
T Consensus 134 ~~~~~i~~al~~lH~~~i~H~dlkp~Nil 162 (296)
T cd05095 134 FMATQIASGMKYLSSLNFVHRDLATRNCL 162 (296)
T ss_pred HHHHHHHHHHHHHHHCCeecccCChheEE
Confidence 34578999999999999999999999986
No 166
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=88.05 E-value=0.15 Score=48.94 Aligned_cols=40 Identities=5% Similarity=-0.079 Sum_probs=35.0
Q ss_pred CCccccCCCCcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 213 SDCDRDHGQSVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 213 ~~~v~~~~~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+.+++.+++--+-...++.+|.|||.+-|.|||.|++|+|
T Consensus 94 ~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLL 133 (318)
T KOG0659|consen 94 KNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLL 133 (318)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceE
Confidence 4445677777888899999999999999999999999987
No 167
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=88.04 E-value=0.25 Score=41.75 Aligned_cols=29 Identities=10% Similarity=0.140 Sum_probs=26.4
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhHh
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAITG 253 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~~ 253 (264)
...+|+.+|++||++.|+|+++++.+|+-
T Consensus 108 ~~~ql~~al~~LH~~~i~H~~i~~~nil~ 136 (268)
T cd06630 108 YTEQLLRGLSYLHENQIIHRDVKGANLLI 136 (268)
T ss_pred HHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 35899999999999999999999999873
No 168
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=88.04 E-value=0.24 Score=48.40 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=30.0
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH------------hhhhcccc
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT------------GICRLSRD 260 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~------------~ic~l~~~ 260 (264)
..+|+-.|.+||++.|++||.|+-||| |+||..-+
T Consensus 131 laEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 131 LAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred HHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 357999999999999999999999995 77775544
No 169
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=88.00 E-value=0.26 Score=41.89 Aligned_cols=29 Identities=17% Similarity=0.079 Sum_probs=25.8
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|++||+..|+|+|.++.||+
T Consensus 110 ~~~~~i~~~l~~lH~~~i~H~dlkp~nil 138 (267)
T cd06645 110 YVSRETLQGLYYLHSKGKMHRDIKGANIL 138 (267)
T ss_pred HHHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence 34568999999999999999999999986
No 170
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=87.99 E-value=0.2 Score=43.54 Aligned_cols=30 Identities=17% Similarity=0.141 Sum_probs=26.5
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.+-..+|+.+|.+||+..|+|+|++++|||
T Consensus 130 ~~i~~~i~~~l~~LH~~~ivH~dikp~nil 159 (290)
T cd05045 130 ISFAWQISRGMQYLAEMKLVHRDLAARNVL 159 (290)
T ss_pred HHHHHHHHHHHHHHHHCCeehhhhhhheEE
Confidence 345578999999999999999999999984
No 171
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=87.87 E-value=0.25 Score=42.63 Aligned_cols=29 Identities=3% Similarity=-0.040 Sum_probs=25.9
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|++||+..|+|+|.++.+||
T Consensus 107 ~~~~ql~~al~~lH~~~i~H~dl~p~nil 135 (291)
T cd07844 107 LFLFQLLRGLAYCHQRRVLHRDLKPQNLL 135 (291)
T ss_pred HHHHHHHHHHHHHHhCCeecccCCHHHEE
Confidence 34568999999999999999999999986
No 172
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=87.86 E-value=0.25 Score=41.97 Aligned_cols=29 Identities=7% Similarity=0.021 Sum_probs=26.3
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||.+.|+|+|.++.+|+
T Consensus 102 ~~~~~i~~~l~~LH~~~i~H~dl~p~nil 130 (283)
T cd05118 102 SYLYQLLQGLAFCHSHGILHRDLKPENLL 130 (283)
T ss_pred HHHHHHHHHHHHHHHCCeeecCcCHHHEE
Confidence 34578999999999999999999999986
No 173
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=87.78 E-value=0.21 Score=45.22 Aligned_cols=29 Identities=17% Similarity=0.098 Sum_probs=26.0
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||.+.|+|+|+++.|||
T Consensus 183 ~~~~qi~~al~~lH~~~i~H~dikp~Nil 211 (343)
T cd05103 183 CYSFQVAKGMEFLASRKCIHRDLAARNIL 211 (343)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCccCeEE
Confidence 34568999999999999999999999986
No 174
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=87.72 E-value=0.26 Score=44.21 Aligned_cols=28 Identities=7% Similarity=0.097 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|+|.++.|||
T Consensus 111 i~~ql~~aL~~LH~~~ivH~dlkp~Nil 138 (336)
T cd07849 111 FLYQILRGLKYIHSANVLHRDLKPSNLL 138 (336)
T ss_pred HHHHHHHHHHHHHhCCeeccCCCHHHEE
Confidence 3468999999999999999999999986
No 175
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=87.67 E-value=0.24 Score=42.24 Aligned_cols=31 Identities=16% Similarity=0.082 Sum_probs=27.4
Q ss_pred CcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 222 SVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 222 ~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
......+|+.+|.+||++.|+|+|.++.||+
T Consensus 124 ~~~~~~~i~~~l~~lH~~~i~h~dlkp~nil 154 (280)
T cd05049 124 LLQIAVQIASGMVYLASQHFVHRDLATRNCL 154 (280)
T ss_pred HHHHHHHHHHHHHHHhhCCeeccccccceEE
Confidence 3445688999999999999999999999986
No 176
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=87.63 E-value=0.23 Score=42.63 Aligned_cols=28 Identities=14% Similarity=0.113 Sum_probs=25.3
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|+|.++++||
T Consensus 122 i~~~i~~~l~~LH~~~i~H~di~p~nil 149 (280)
T cd05043 122 MAIQIACGMSYLHKRGVIHKDIAARNCV 149 (280)
T ss_pred HHHHHHHHHHHHHHCCEeecccCHhhEE
Confidence 4458999999999999999999999985
No 177
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=87.60 E-value=0.26 Score=41.63 Aligned_cols=30 Identities=10% Similarity=0.094 Sum_probs=26.5
Q ss_pred cchhHHHHHHhhhhcc-ccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQN-QTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~-~~i~~~d~~~a~i~ 252 (264)
..-..+|+..|.+||. +.|+|+|.+++||+
T Consensus 120 ~~i~~~l~~~l~~lH~~~givHrDlkP~NIl 150 (190)
T cd05145 120 EELYEQVVEQMRRLYQEAGLVHGDLSEYNIL 150 (190)
T ss_pred HHHHHHHHHHHHHHHHhCCEecCCCChhhEE
Confidence 3445789999999999 99999999999987
No 178
>PRK10345 hypothetical protein; Provisional
Probab=87.53 E-value=0.26 Score=43.70 Aligned_cols=27 Identities=15% Similarity=0.149 Sum_probs=24.2
Q ss_pred hHHHHHHh-hhhccccccccCcchhhhH
Q 024658 226 STAIISSL-RGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl-~~l~~~~i~~~d~~~a~i~ 252 (264)
..+++..| ++||.+.|+|+|.|++|||
T Consensus 110 ~~~~L~~l~~yLh~~~IvhrDlKp~NIL 137 (210)
T PRK10345 110 LRQLLKKLKRYLLDNRIVTMELKPQNIL 137 (210)
T ss_pred HHHHHHHHHHHHHHCCEeecCCCHHHEE
Confidence 46778777 8999999999999999997
No 179
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=87.50 E-value=0.27 Score=42.29 Aligned_cols=27 Identities=15% Similarity=0.117 Sum_probs=24.8
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||+..|+|+|.++.|||
T Consensus 125 ~~~l~~~l~~lH~~~~vH~dlkp~Nil 151 (277)
T cd05062 125 AGEIADGMAYLNANKFVHRDLAARNCM 151 (277)
T ss_pred HHHHHHHHHHHHHCCcccCCcchheEE
Confidence 457999999999999999999999986
No 180
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=87.48 E-value=0.28 Score=40.87 Aligned_cols=29 Identities=14% Similarity=0.109 Sum_probs=26.4
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||.+.|+|+|+++.||+
T Consensus 97 ~i~~qi~~~L~~lH~~~i~H~di~~~nil 125 (265)
T cd05579 97 IYIAEIVLALEYLHSNGIIHRDLKPDNIL 125 (265)
T ss_pred HHHHHHHHHHHHHHHcCeecCCCCHHHeE
Confidence 44578999999999999999999999987
No 181
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=87.47 E-value=0.26 Score=41.65 Aligned_cols=27 Identities=11% Similarity=0.113 Sum_probs=24.8
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||+..|+|+|.++.|||
T Consensus 104 ~~~i~~~l~~lH~~~i~H~dlk~~nil 130 (262)
T cd05058 104 GLQVAKGMEYLASKKFVHRDLAARNCM 130 (262)
T ss_pred HHHHHHHHHHHHhCCccccccCcceEE
Confidence 358999999999999999999999976
No 182
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=87.42 E-value=0.28 Score=42.86 Aligned_cols=29 Identities=14% Similarity=0.141 Sum_probs=26.2
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|+++.||+
T Consensus 106 ~~~~qi~~~l~~lH~~~ivH~dlkp~Nil 134 (285)
T cd05605 106 FYAAEITCGLEDLHRERIVYRDLKPENIL 134 (285)
T ss_pred HHHHHHHHHHHHHHHCCcEecCCCHHHEE
Confidence 34578999999999999999999999987
No 183
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=87.42 E-value=0.27 Score=43.08 Aligned_cols=29 Identities=14% Similarity=0.140 Sum_probs=26.0
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||+..|+|+|.++.|||
T Consensus 106 ~~~~qi~~~l~~lH~~~iiH~dikp~Nil 134 (285)
T cd05630 106 FYAAEICCGLEDLHQERIVYRDLKPENIL 134 (285)
T ss_pred HHHHHHHHHHHHHHhCCEEeCCCCHHHEE
Confidence 34578999999999999999999999985
No 184
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=87.41 E-value=0.28 Score=42.69 Aligned_cols=28 Identities=14% Similarity=0.060 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|+|.++.||+
T Consensus 113 i~~qi~~~l~~lH~~~i~h~dlkp~Nil 140 (316)
T cd07842 113 LLWQILNGVHYLHSNWVLHRDLKPANIL 140 (316)
T ss_pred HHHHHHHHHHHHHhCCEeeCCCCHHHEE
Confidence 3468999999999999999999999986
No 185
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=87.40 E-value=0.29 Score=41.59 Aligned_cols=30 Identities=23% Similarity=0.137 Sum_probs=26.6
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..-..+|+.+|.+||++.|+|+|.++.||+
T Consensus 112 ~~~~~~l~~aL~~lH~~~i~H~dl~p~nil 141 (284)
T cd05038 112 LLFSSQICKGMDYLGSQRYIHRDLAARNIL 141 (284)
T ss_pred HHHHHHHHHHHHHHHhCCeecCCCCHHhEE
Confidence 345578999999999999999999999986
No 186
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=87.39 E-value=0.23 Score=42.87 Aligned_cols=29 Identities=10% Similarity=0.022 Sum_probs=26.1
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhHh
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAITG 253 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~~ 253 (264)
...+|+.+|.+||++.|+|+|.++.|||=
T Consensus 121 ~~~qi~~~l~~LH~~~ivH~dlkp~nil~ 149 (277)
T cd05036 121 CARDVAKGCKYLEENHFIHRDIAARNCLL 149 (277)
T ss_pred HHHHHHHHHHHHHHCCEeecccchheEEE
Confidence 45689999999999999999999999873
No 187
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=87.39 E-value=0.25 Score=42.08 Aligned_cols=28 Identities=14% Similarity=0.112 Sum_probs=25.1
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||+..|+|+|+++.+||
T Consensus 124 ~~~~i~~~l~~lH~~~i~H~di~p~nil 151 (277)
T cd05032 124 MAAEIADGMAYLAAKKFVHRDLAARNCM 151 (277)
T ss_pred HHHHHHHHHHHHHhCCccccccChheEE
Confidence 3468999999999999999999999975
No 188
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=87.38 E-value=0.26 Score=50.14 Aligned_cols=29 Identities=7% Similarity=0.060 Sum_probs=26.3
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|+|+.|||
T Consensus 108 ~i~~qil~aL~yLH~~gIiHrDLKP~NIL 136 (669)
T cd05610 108 KYISEVALALDYLHRHGIIHRDLKPDNML 136 (669)
T ss_pred HHHHHHHHHHHHHHhCCEEeCCccHHHEE
Confidence 34578999999999999999999999996
No 189
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=87.34 E-value=0.31 Score=46.45 Aligned_cols=26 Identities=12% Similarity=0.081 Sum_probs=22.7
Q ss_pred HHHHHHhhhhcccc---ccccCcchhhhH
Q 024658 227 TAIISSLRGLQNQT---MTDQGDAAAAIT 252 (264)
Q Consensus 227 t~i~~sl~~l~~~~---i~~~d~~~a~i~ 252 (264)
..|-.+|.|||+.. |||||+|++|||
T Consensus 181 ~g~A~gL~yLH~~~~~~iiHrDiKssNIL 209 (361)
T KOG1187|consen 181 LGAARGLAYLHEGCPPPIIHRDIKSSNIL 209 (361)
T ss_pred HHHHHHHHHHccCCCCCEecCCCCHHHee
Confidence 45667999999966 999999999997
No 190
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=87.32 E-value=0.25 Score=49.64 Aligned_cols=26 Identities=19% Similarity=0.217 Sum_probs=24.9
Q ss_pred HHHHHHhhhhccccccccCcchhhhH
Q 024658 227 TAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 227 t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+.++.+|++||++..||||+|+||||
T Consensus 118 re~l~~l~ylH~~~kiHrDIKaanil 143 (467)
T KOG0201|consen 118 REVLKGLDYLHSEKKIHRDIKAANIL 143 (467)
T ss_pred HHHHHHhhhhhhcceeccccccccee
Confidence 78899999999999999999999997
No 191
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=87.29 E-value=0.31 Score=41.11 Aligned_cols=29 Identities=14% Similarity=0.195 Sum_probs=26.1
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||...|+|+|.++.||+
T Consensus 108 ~~~~~l~~~l~~lH~~~i~H~dl~p~nil 136 (263)
T cd06625 108 KYTRQILEGVEYLHSNMIVHRDIKGANIL 136 (263)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 34578999999999999999999999987
No 192
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=87.24 E-value=0.31 Score=41.22 Aligned_cols=28 Identities=4% Similarity=0.137 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||+..|+|++.++.+|+
T Consensus 102 i~~qi~~aL~~lH~~~i~H~dl~p~nil 129 (260)
T cd05611 102 YIAEVVLGVEDLHQRGIIHRDIKPENLL 129 (260)
T ss_pred HHHHHHHHHHHHHHCCeecCCCCHHHeE
Confidence 3478999999999999999999999986
No 193
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=87.24 E-value=0.3 Score=42.38 Aligned_cols=29 Identities=10% Similarity=0.038 Sum_probs=26.0
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||++.|+|+|.++.||+
T Consensus 106 ~~~~qi~~al~~lH~~~i~H~dl~p~nil 134 (298)
T cd07841 106 SYMLMTLRGLEYLHSNWILHRDLKPNNLL 134 (298)
T ss_pred HHHHHHHHHHHHHHhCCeeecCCChhhEE
Confidence 34578999999999999999999999985
No 194
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=87.24 E-value=0.23 Score=41.91 Aligned_cols=29 Identities=10% Similarity=0.145 Sum_probs=25.9
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||+..|+|+|.++.||+
T Consensus 106 ~~~~qi~~~l~~lh~~~i~H~di~p~Nil 134 (256)
T cd05039 106 GFALDVCEGMEYLEEKNFVHRDLAARNVL 134 (256)
T ss_pred HHHHHHHHHHHHHHhCCccchhcccceEE
Confidence 34468999999999999999999999986
No 195
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=87.23 E-value=0.28 Score=41.17 Aligned_cols=30 Identities=13% Similarity=0.119 Sum_probs=26.4
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.+-..+|+.+|.+||++.|+|+|++++||+
T Consensus 105 ~~~~~~l~~~l~~lH~~~i~H~di~p~nil 134 (257)
T cd08223 105 VEWFVQIAMALQYLHEKHILHRDLKTQNVF 134 (257)
T ss_pred HHHHHHHHHHHHHHHhCCeeccCCCchhEE
Confidence 344578999999999999999999999985
No 196
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=87.10 E-value=0.3 Score=42.51 Aligned_cols=29 Identities=21% Similarity=0.170 Sum_probs=26.2
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||+..|+|+|++++||+
T Consensus 101 ~~~~ql~~~l~~lH~~~i~H~di~p~nil 129 (278)
T cd05606 101 FYAAEIILGLEHMHNRFVVYRDLKPANIL 129 (278)
T ss_pred HHHHHHHHHHHHHHHCCEEcCCCCHHHEE
Confidence 44578999999999999999999999986
No 197
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=87.08 E-value=0.29 Score=41.61 Aligned_cols=29 Identities=10% Similarity=0.109 Sum_probs=25.9
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||++.|+|+|.++.||+
T Consensus 104 ~i~~qi~~~l~~lH~~~i~H~dl~p~ni~ 132 (256)
T cd05059 104 DMCSDVCEAMEYLESNGFIHRDLAARNCL 132 (256)
T ss_pred HHHHHHHHHHHHHHHCCcccccccHhhEE
Confidence 34578999999999999999999999986
No 198
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=87.01 E-value=0.32 Score=40.73 Aligned_cols=27 Identities=11% Similarity=0.142 Sum_probs=25.2
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|++||++.|+|++.++.+|+
T Consensus 107 ~~~i~~~l~~lh~~~i~h~dl~~~nil 133 (256)
T cd08220 107 FVQILLALHHVHTKLILHRDLKTQNIL 133 (256)
T ss_pred HHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 468999999999999999999999988
No 199
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=86.95 E-value=0.32 Score=41.33 Aligned_cols=28 Identities=11% Similarity=0.177 Sum_probs=25.4
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|.++.||+
T Consensus 116 ~~~qi~~~l~~LH~~~ivh~dl~~~nil 143 (272)
T cd06637 116 ICREILRGLSHLHQHKVIHRDIKGQNVL 143 (272)
T ss_pred HHHHHHHHHHHHHHCCCccCCCCHHHEE
Confidence 4468999999999999999999999985
No 200
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=86.90 E-value=0.34 Score=42.43 Aligned_cols=28 Identities=4% Similarity=-0.007 Sum_probs=25.6
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|+|.++.|||
T Consensus 109 ~~~qi~~aL~~lH~~~i~H~dlkp~Nil 136 (301)
T cd07873 109 FLFQLLRGLNYCHRRKVLHRDLKPQNLL 136 (301)
T ss_pred HHHHHHHHHHHHHhCCeeCCCCCHHHEE
Confidence 4578999999999999999999999986
No 201
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=86.90 E-value=0.34 Score=41.22 Aligned_cols=29 Identities=14% Similarity=0.069 Sum_probs=26.1
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|++||+..|+|+|.++.||+
T Consensus 110 ~~~~qi~~~l~~lH~~~i~H~dl~p~nil 138 (267)
T cd06646 110 YVCRETLQGLAYLHSKGKMHRDIKGANIL 138 (267)
T ss_pred HHHHHHHHHHHHHHHCCccccCCCHHHEE
Confidence 45578999999999999999999999985
No 202
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=86.89 E-value=0.28 Score=41.59 Aligned_cols=29 Identities=10% Similarity=-0.026 Sum_probs=25.8
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+...+|+.+|++||++.|+|+|.++.+|+
T Consensus 110 ~~~~~l~~~l~~lH~~~i~H~dl~p~nil 138 (269)
T cd05044 110 DICLDVAKGCVYLEQMHFIHRDLAARNCL 138 (269)
T ss_pred HHHHHHHHHHHHHHhCCcccCCCChheEE
Confidence 34468899999999999999999999987
No 203
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=86.85 E-value=0.28 Score=43.96 Aligned_cols=28 Identities=14% Similarity=0.087 Sum_probs=25.5
Q ss_pred hHHHHHHhhhhccccccccCcchhhhHh
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAITG 253 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~~ 253 (264)
..+|+.+|.+||+..|+|+|.++.|||=
T Consensus 140 ~~qi~~al~~LH~~givH~dlkp~Nill 167 (334)
T cd05100 140 AYQVARGMEYLASQKCIHRDLAARNVLV 167 (334)
T ss_pred HHHHHHHHHHHHHCCeeccccccceEEE
Confidence 4689999999999999999999999863
No 204
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=86.79 E-value=0.33 Score=41.20 Aligned_cols=29 Identities=14% Similarity=0.137 Sum_probs=25.8
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+-..+|+.+|++||+..|+|+|.+++||+
T Consensus 106 ~i~~~i~~al~~LH~~~i~H~dl~p~ni~ 134 (260)
T cd05067 106 DMAAQIAEGMAFIERKNYIHRDLRAANIL 134 (260)
T ss_pred HHHHHHHHHHHHHhcCCeecccccHHhEE
Confidence 34568999999999999999999999975
No 205
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=86.74 E-value=0.28 Score=41.22 Aligned_cols=28 Identities=14% Similarity=0.057 Sum_probs=25.2
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|+|.++.|||
T Consensus 98 ~~~~~~~~l~~lH~~~i~h~di~p~nil 125 (251)
T cd05041 98 MSLDAAAGMEYLESKNCIHRDLAARNCL 125 (251)
T ss_pred HHHHHHHHHHHHHhCCEehhhcCcceEE
Confidence 3467889999999999999999999986
No 206
>PRK09188 serine/threonine protein kinase; Provisional
Probab=86.73 E-value=0.28 Score=47.31 Aligned_cols=29 Identities=14% Similarity=0.083 Sum_probs=26.2
Q ss_pred chhHHHHHHhhhhccccccccCc-chhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGD-AAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~-~~a~i~ 252 (264)
+...+|+.+|.+||++.|+|||. |++|||
T Consensus 115 ~~~~~i~~aL~~lH~~gIiHrDL~KP~NIL 144 (365)
T PRK09188 115 AWFRSAHRALRDLHRAGITHNDLAKPQNWL 144 (365)
T ss_pred HHHHHHHHHHHHHHHCCCeeCCCCCcceEE
Confidence 34578999999999999999999 999987
No 207
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=86.68 E-value=0.3 Score=42.47 Aligned_cols=27 Identities=15% Similarity=0.148 Sum_probs=24.5
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||.+.|+|+|.++.|||
T Consensus 125 ~~~l~~~l~~lH~~~i~H~dikp~nil 151 (288)
T cd05061 125 AAEIADGMAYLNAKKFVHRDLAARNCM 151 (288)
T ss_pred HHHHHHHHHHHHhCCCcCCCCChheEE
Confidence 357889999999999999999999985
No 208
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=86.65 E-value=0.34 Score=42.76 Aligned_cols=30 Identities=13% Similarity=0.189 Sum_probs=26.8
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.+...+|+.+|.+||++.|+|+|.++.||+
T Consensus 120 ~~~~~qi~~~L~~LH~~~ivH~dl~p~Nil 149 (297)
T cd06659 120 ATVCESVLQALCYLHSQGVIHRDIKSDSIL 149 (297)
T ss_pred HHHHHHHHHHHHHHHhCCeecCCCCHHHeE
Confidence 345678999999999999999999999985
No 209
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=86.63 E-value=0.31 Score=40.80 Aligned_cols=28 Identities=11% Similarity=0.088 Sum_probs=25.4
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|++.++.||+
T Consensus 106 i~~~l~~al~~lH~~~i~h~dl~~~nil 133 (256)
T cd08529 106 FFIQILLGLAHLHSKKILHRDIKSLNLF 133 (256)
T ss_pred HHHHHHHHHHHHHHCCcccCCCCcceEE
Confidence 3468999999999999999999999986
No 210
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=86.53 E-value=0.3 Score=41.73 Aligned_cols=29 Identities=10% Similarity=0.092 Sum_probs=26.4
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||+..|+|+|.++.|||
T Consensus 104 ~~~~~i~~~l~~lH~~~i~H~dl~p~nil 132 (256)
T cd05113 104 EMCKDVCEGMAYLESKQFIHRDLAARNCL 132 (256)
T ss_pred HHHHHHHHHHHHHHhCCeeccccCcceEE
Confidence 45578999999999999999999999987
No 211
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=86.51 E-value=0.36 Score=41.23 Aligned_cols=28 Identities=14% Similarity=0.194 Sum_probs=25.8
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|++.+++||+
T Consensus 111 ~~~~i~~al~~LH~~~i~H~dl~p~ni~ 138 (264)
T cd06653 111 YTRQILQGVSYLHSNMIVHRDIKGANIL 138 (264)
T ss_pred HHHHHHHHHHHHHhCCEecCCCCHHHEE
Confidence 4478999999999999999999999987
No 212
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=86.43 E-value=0.29 Score=41.33 Aligned_cols=28 Identities=18% Similarity=0.147 Sum_probs=25.1
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|.++.||+
T Consensus 109 ~~~~i~~al~~lH~~~i~h~dl~~~nil 136 (261)
T cd05148 109 MACQVAEGMAYLEEQNSIHRDLAARNIL 136 (261)
T ss_pred HHHHHHHHHHHHHHCCeeccccCcceEE
Confidence 4468899999999999999999999875
No 213
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=86.42 E-value=0.3 Score=41.71 Aligned_cols=29 Identities=17% Similarity=0.147 Sum_probs=25.9
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|++||+..|+|+|.+++|||
T Consensus 111 ~~~~~l~~~l~~lH~~~~~H~dl~p~nil 139 (270)
T cd05056 111 LYSYQLSTALAYLESKRFVHRDIAARNVL 139 (270)
T ss_pred HHHHHHHHHHHHHHhCCeeccccChheEE
Confidence 34568999999999999999999999985
No 214
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=86.40 E-value=0.36 Score=41.52 Aligned_cols=27 Identities=11% Similarity=0.196 Sum_probs=24.8
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||+..|+|++.++.||+
T Consensus 127 ~~qi~~al~~LH~~~ivH~dl~~~nil 153 (282)
T cd06636 127 CREILRGLAHLHAHKVIHRDIKGQNVL 153 (282)
T ss_pred HHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence 457999999999999999999999976
No 215
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=86.37 E-value=0.41 Score=40.27 Aligned_cols=29 Identities=10% Similarity=0.044 Sum_probs=26.2
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|++||++.|+|++.++++|+
T Consensus 117 ~~~~ql~~al~~lH~~~i~H~~l~p~ni~ 145 (275)
T cd06608 117 YILRETLRGLAYLHENKVIHRDIKGQNIL 145 (275)
T ss_pred HHHHHHHHHHHHHhcCCcccCCCCHHHEE
Confidence 34578999999999999999999999987
No 216
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=86.34 E-value=0.37 Score=40.94 Aligned_cols=32 Identities=13% Similarity=0.131 Sum_probs=27.9
Q ss_pred CCcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 221 QSVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 221 ~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+......+|+.+|++||++.|+|++.++.||+
T Consensus 101 ~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil 132 (287)
T cd07840 101 QIKCYMKQLLEGLQYLHSNGILHRDIKGSNIL 132 (287)
T ss_pred HHHHHHHHHHHHHHHHHHCCceeccCcHHHeE
Confidence 34456688999999999999999999999986
No 217
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=86.33 E-value=0.34 Score=43.84 Aligned_cols=28 Identities=7% Similarity=0.156 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|+|.++.|||
T Consensus 123 ~~~ql~~aL~~LH~~gi~H~dlkp~Nil 150 (353)
T cd07850 123 LLYQMLCGIKHLHSAGIIHRDLKPSNIV 150 (353)
T ss_pred HHHHHHHHHHHHHhCCeeeCCCCHHHEE
Confidence 3578999999999999999999999986
No 218
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=86.31 E-value=0.37 Score=40.82 Aligned_cols=28 Identities=11% Similarity=0.139 Sum_probs=25.3
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|++.++.||+
T Consensus 111 ~~~~i~~~l~~LH~~~i~H~dl~p~nil 138 (267)
T cd08229 111 YFVQLCSALEHMHSRRVMHRDIKPANVF 138 (267)
T ss_pred HHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence 3568999999999999999999999985
No 219
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=86.27 E-value=0.3 Score=41.99 Aligned_cols=29 Identities=14% Similarity=0.129 Sum_probs=25.8
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|++||+..|+|+|+++.|||
T Consensus 116 ~~~~~i~~al~~lH~~~i~H~dikp~nil 144 (270)
T cd05047 116 HFAADVARGMDYLSQKQFIHRDLAARNIL 144 (270)
T ss_pred HHHHHHHHHHHHHHHCCEeecccccceEE
Confidence 34467889999999999999999999987
No 220
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=86.24 E-value=0.34 Score=41.89 Aligned_cols=29 Identities=7% Similarity=0.079 Sum_probs=26.3
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||++.|+|+|.+++|||
T Consensus 134 ~~~~~i~~aL~~lH~~~i~H~dl~p~nil 162 (288)
T cd05050 134 CIAKQVAAGMAYLSERKFVHRDLATRNCL 162 (288)
T ss_pred HHHHHHHHHHHHHHhCCeecccccHhheE
Confidence 45678999999999999999999999986
No 221
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=86.22 E-value=0.36 Score=43.27 Aligned_cols=29 Identities=3% Similarity=0.067 Sum_probs=26.0
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||+..|+|++.++.|||
T Consensus 111 ~i~~qi~~aL~~LH~~~ivH~dlkp~Nil 139 (334)
T cd07855 111 YFLYQLLRGLKYIHSANVIHRDLKPSNLL 139 (334)
T ss_pred HHHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence 34578999999999999999999999986
No 222
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=86.18 E-value=0.32 Score=41.24 Aligned_cols=30 Identities=10% Similarity=0.078 Sum_probs=26.6
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhHh
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAITG 253 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~~ 253 (264)
.-..+|+.+|.+||+..|+|+|.++.|||-
T Consensus 99 ~~~~qi~~~l~~lh~~~i~H~di~p~nili 128 (257)
T cd05060 99 ELAHQVAMGMAYLESKHFVHRDLAARNVLL 128 (257)
T ss_pred HHHHHHHHHHHHHhhcCeeccCcccceEEE
Confidence 445789999999999999999999999873
No 223
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=86.17 E-value=0.36 Score=41.79 Aligned_cols=28 Identities=11% Similarity=0.127 Sum_probs=25.8
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|+|.++.|||
T Consensus 100 ~~~qi~~~l~~lH~~~i~H~dlkp~Nil 127 (279)
T cd06619 100 IAVAVVKGLTYLWSLKILHRDVKPSNML 127 (279)
T ss_pred HHHHHHHHHHHHHHCCEeeCCCCHHHEE
Confidence 4578999999999999999999999986
No 224
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=86.11 E-value=0.36 Score=41.72 Aligned_cols=29 Identities=14% Similarity=0.155 Sum_probs=25.9
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|++||+..|+|+|.++.||+
T Consensus 123 ~i~~qi~~al~~lH~~~i~H~dl~p~nil 151 (310)
T cd07865 123 KVMKMLLNGLYYIHRNKILHRDMKAANIL 151 (310)
T ss_pred HHHHHHHHHHHHHHHCCeeccCCCHHHEE
Confidence 34578999999999999999999999984
No 225
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=86.09 E-value=0.36 Score=42.10 Aligned_cols=28 Identities=14% Similarity=0.114 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|.+++||+
T Consensus 134 i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 134 MAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred HHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 4578999999999999999999999987
No 226
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=85.99 E-value=0.37 Score=42.32 Aligned_cols=30 Identities=7% Similarity=0.081 Sum_probs=27.0
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..-..+|+.+|.+||+..|+|+|.++.|||
T Consensus 111 ~~~~~qi~~~l~~lH~~~i~H~dl~p~nil 140 (309)
T cd07845 111 KCLMLQLLRGLQYLHENFIIHRDLKVSNLL 140 (309)
T ss_pred HHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 445688999999999999999999999986
No 227
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=85.91 E-value=0.4 Score=40.83 Aligned_cols=29 Identities=14% Similarity=0.188 Sum_probs=26.5
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|++.++.||+
T Consensus 110 ~~~~~l~~~l~~lH~~~i~H~dl~p~nil 138 (265)
T cd06652 110 KYTRQILEGVSYLHSNMIVHRDIKGANIL 138 (265)
T ss_pred HHHHHHHHHHHHHHhCCEecCCCCHHHEE
Confidence 44578999999999999999999999997
No 228
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=85.87 E-value=0.35 Score=41.06 Aligned_cols=28 Identities=7% Similarity=0.105 Sum_probs=25.2
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|+|.++.||+
T Consensus 107 ~~~~l~~al~~lH~~~i~H~di~p~Nil 134 (260)
T cd05070 107 MAAQVAAGMAYIERMNYIHRDLRSANIL 134 (260)
T ss_pred HHHHHHHHHHHHHHCCcccCCCccceEE
Confidence 3478999999999999999999999974
No 229
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=85.80 E-value=0.39 Score=41.81 Aligned_cols=28 Identities=7% Similarity=0.100 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|++||++.|+|+|.++++||
T Consensus 106 ~~~qil~~l~~lH~~~i~H~dl~p~nil 133 (290)
T cd05580 106 YAAQVVLALEYLHSLDIVYRDLKPENLL 133 (290)
T ss_pred HHHHHHHHHHHHHHCCEecCCCCHHHEE
Confidence 3468999999999999999999999986
No 230
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=85.80 E-value=0.39 Score=41.51 Aligned_cols=29 Identities=14% Similarity=0.156 Sum_probs=25.9
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.++.|||
T Consensus 119 ~i~~~l~~al~~lH~~~i~H~dl~p~nil 147 (311)
T cd07866 119 CYMLQLLEGINYLHENHILHRDIKAANIL 147 (311)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 34578999999999999999999999985
No 231
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=85.76 E-value=0.35 Score=41.18 Aligned_cols=28 Identities=14% Similarity=0.124 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|+|.++.||+
T Consensus 107 ~~~~l~~al~~lH~~~i~H~dl~~~Nil 134 (260)
T cd05069 107 MAAQIADGMAYIERMNYIHRDLRAANIL 134 (260)
T ss_pred HHHHHHHHHHHHHhCCEeecccCcceEE
Confidence 4568999999999999999999999986
No 232
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=85.71 E-value=0.41 Score=41.09 Aligned_cols=28 Identities=11% Similarity=0.052 Sum_probs=25.4
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||+..|+|+|.++++|+
T Consensus 129 ~~~~i~~~l~~lH~~~i~H~dlkp~nil 156 (286)
T cd06638 129 ILHEALMGLQHLHVNKTIHRDVKGNNIL 156 (286)
T ss_pred HHHHHHHHHHHHHhCCccccCCCHHhEE
Confidence 4578899999999999999999999985
No 233
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=85.69 E-value=0.44 Score=38.29 Aligned_cols=32 Identities=16% Similarity=0.117 Sum_probs=27.5
Q ss_pred CcchhHHHHHHhhhhccccccccCcchhhhHh
Q 024658 222 SVSRSTAIISSLRGLQNQTMTDQGDAAAAITG 253 (264)
Q Consensus 222 ~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~~ 253 (264)
......+|+.+|++||.+.|+|||.|+.+|+.
T Consensus 103 ~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~ 134 (384)
T COG0515 103 ALFILAQILSALEYLHSKGIIHRDIKPENILL 134 (384)
T ss_pred HHHHHHHHHHHHHHHHhCCeeccCCCHHHeee
Confidence 34456788999999999999999999999975
No 234
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=85.63 E-value=0.4 Score=41.15 Aligned_cols=31 Identities=13% Similarity=0.099 Sum_probs=27.1
Q ss_pred CcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 222 SVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 222 ~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
......+|+.+|.+||++.|+|+|.++.||+
T Consensus 105 ~~~~~~ql~~~l~~lh~~~i~h~dl~p~nil 135 (280)
T cd06611 105 IRYVCRQMLEALNFLHSHKVIHRDLKAGNIL 135 (280)
T ss_pred HHHHHHHHHHHHHHHHHCCcccCCCChhhEE
Confidence 3445678999999999999999999999976
No 235
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=85.56 E-value=0.35 Score=41.88 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=26.3
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+..|.+||+..|+|+|.+++||+
T Consensus 113 ~i~~~i~~aL~~lH~~gi~H~dlkp~Nil 141 (284)
T cd05079 113 KYAVQICKGMDYLGSRQYVHRDLAARNVL 141 (284)
T ss_pred HHHHHHHHHHHHHHHCCeeecccchheEE
Confidence 34578999999999999999999999998
No 236
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=85.55 E-value=0.38 Score=40.70 Aligned_cols=28 Identities=18% Similarity=0.182 Sum_probs=25.4
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|+|.++.||+
T Consensus 105 ~~~qi~~al~~lH~~~~~H~dl~p~nil 132 (254)
T cd05083 105 FSLDVAEGMEYLESKKLVHRDLAARNIL 132 (254)
T ss_pred HHHHHHHHHHHHHhCCeeccccCcceEE
Confidence 3568999999999999999999999985
No 237
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=85.39 E-value=0.41 Score=40.87 Aligned_cols=30 Identities=7% Similarity=0.073 Sum_probs=26.3
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||+..|+|+|.++.||+
T Consensus 102 ~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~ 131 (286)
T cd07832 102 KSYMRMLLKGVAYMHANGIMHRDLKPANLL 131 (286)
T ss_pred HHHHHHHHHHHHHHHHCCeecCCcCHHHEE
Confidence 344578999999999999999999999986
No 238
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=85.39 E-value=0.41 Score=40.93 Aligned_cols=30 Identities=3% Similarity=0.004 Sum_probs=26.5
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||++.|+|+|.++.+|+
T Consensus 103 ~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~ 132 (284)
T cd07836 103 KSFTYQLLKGIAFCHENRVLHRDLKPQNLL 132 (284)
T ss_pred HHHHHHHHHHHHHHHHCCeeeCCCCHHHEE
Confidence 344578999999999999999999999986
No 239
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=85.30 E-value=0.42 Score=42.97 Aligned_cols=28 Identities=18% Similarity=0.237 Sum_probs=24.6
Q ss_pred hhHHHHHHhhhhccc-cccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQ-TMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~-~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++ .|+|+|.+++|||
T Consensus 108 ~~~~i~~~l~~lH~~~~ivH~dlkp~Nil 136 (331)
T cd06649 108 VSIAVLRGLAYLREKHQIMHRDVKPSNIL 136 (331)
T ss_pred HHHHHHHHHHHHhhcCCEEcCCCChhhEE
Confidence 357899999999986 5999999999986
No 240
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=85.30 E-value=0.42 Score=42.63 Aligned_cols=30 Identities=17% Similarity=0.082 Sum_probs=27.0
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||+..|+|+|.++.|||
T Consensus 122 ~~~~~ql~~aL~~LH~~~i~H~dl~~~nil 151 (335)
T PTZ00024 122 KCILLQILNGLNVLHKWYFMHRDLSPANIF 151 (335)
T ss_pred HHHHHHHHHHHHHHHhCCeecccccHHHeE
Confidence 445678999999999999999999999986
No 241
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=85.29 E-value=0.45 Score=40.64 Aligned_cols=29 Identities=14% Similarity=0.200 Sum_probs=26.4
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|++.++.+|+
T Consensus 110 ~~~~qi~~~l~~LH~~~i~H~~l~p~nil 138 (266)
T cd06651 110 KYTRQILEGMSYLHSNMIVHRDIKGANIL 138 (266)
T ss_pred HHHHHHHHHHHHHHhCCeeeCCCCHHHEE
Confidence 44678999999999999999999999987
No 242
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=85.25 E-value=0.47 Score=40.20 Aligned_cols=29 Identities=7% Similarity=0.110 Sum_probs=26.1
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||+..|+|+|.++.||+
T Consensus 110 ~~~~~i~~~l~~LH~~~i~H~dl~~~nil 138 (267)
T cd08228 110 KYFVQLCSAVEHMHSRRVMHRDIKPANVF 138 (267)
T ss_pred HHHHHHHHHHHHHhhCCeeCCCCCHHHEE
Confidence 44568999999999999999999999987
No 243
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=85.23 E-value=0.43 Score=42.03 Aligned_cols=28 Identities=11% Similarity=0.086 Sum_probs=25.6
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|+|.++.|||
T Consensus 145 ~~~qi~~aL~~lH~~gi~H~dlkp~Nil 172 (307)
T cd05098 145 CAYQVARGMEYLASKKCIHRDLAARNVL 172 (307)
T ss_pred HHHHHHHHHHHHHHCCcccccccHHheE
Confidence 3578899999999999999999999987
No 244
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=85.23 E-value=0.37 Score=41.03 Aligned_cols=29 Identities=21% Similarity=0.154 Sum_probs=25.8
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||+..|+|+|.++.|||
T Consensus 110 ~~~~~l~~~l~~Lh~~~i~H~di~p~nil 138 (266)
T cd05033 110 GMLRGIASGMKYLSEMNYVHRDLAARNIL 138 (266)
T ss_pred HHHHHHHHHHHHHHhCCcccCCCCcceEE
Confidence 34467889999999999999999999987
No 245
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=85.18 E-value=0.39 Score=41.01 Aligned_cols=29 Identities=17% Similarity=0.141 Sum_probs=25.8
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|++||++.|+|+|.+++||+
T Consensus 110 ~i~~~l~~al~~lH~~g~~H~dl~p~nil 138 (269)
T cd05065 110 GMLRGIAAGMKYLSEMNYVHRDLAARNIL 138 (269)
T ss_pred HHHHHHHHHHHHHHHCCEeecccChheEE
Confidence 34468889999999999999999999986
No 246
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=85.16 E-value=0.38 Score=40.72 Aligned_cols=28 Identities=11% Similarity=0.105 Sum_probs=25.2
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|+|.++.||+
T Consensus 105 ~~~~i~~~l~~lH~~~i~H~dl~p~ni~ 132 (256)
T cd05114 105 MCQDVCEGMEYLERNSFIHRDLAARNCL 132 (256)
T ss_pred HHHHHHHHHHHHHHCCccccccCcceEE
Confidence 3467899999999999999999999986
No 247
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=85.10 E-value=0.4 Score=40.74 Aligned_cols=29 Identities=17% Similarity=0.173 Sum_probs=26.1
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.++.||+
T Consensus 107 ~~~~~i~~~l~~lH~~~i~H~dl~p~Nil 135 (261)
T cd05068 107 DMAAQVASGMAYLEAQNYIHRDLAARNVL 135 (261)
T ss_pred HHHHHHHHHHHHHHhCCeeeccCCcceEE
Confidence 44568999999999999999999999987
No 248
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=85.08 E-value=0.42 Score=40.16 Aligned_cols=29 Identities=14% Similarity=0.051 Sum_probs=25.7
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||+..|+|+|.++.||+
T Consensus 105 ~~~~ql~~~l~~lh~~~i~h~dl~p~ni~ 133 (262)
T cd06613 105 YVCRETLKGLAYLHETGKIHRDIKGANIL 133 (262)
T ss_pred HHHHHHHHHHHHHHhCCceecCCChhhEE
Confidence 34567899999999999999999999975
No 249
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=85.05 E-value=0.47 Score=40.69 Aligned_cols=30 Identities=3% Similarity=-0.001 Sum_probs=26.8
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||++.|+|++.++.+|+
T Consensus 102 ~~~~~~i~~~L~~lH~~~~~H~dl~p~nil 131 (283)
T cd07835 102 KSYLYQLLQGIAYCHSHRVLHRDLKPQNLL 131 (283)
T ss_pred HHHHHHHHHHHHHHHHCCeeCCCCCHHHEE
Confidence 445678999999999999999999999975
No 250
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=85.03 E-value=0.37 Score=41.46 Aligned_cols=29 Identities=14% Similarity=0.185 Sum_probs=25.8
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||+..|+|+|+++.||+
T Consensus 113 ~~~~qi~~~l~~LH~~~i~H~di~p~nil 141 (279)
T cd05057 113 NWCVQIAKGMSYLEEKRLVHRDLAARNVL 141 (279)
T ss_pred HHHHHHHHHHHHHHhCCEEecccCcceEE
Confidence 34468999999999999999999999986
No 251
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=84.97 E-value=0.41 Score=41.53 Aligned_cols=29 Identities=3% Similarity=0.020 Sum_probs=25.8
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|++||++.|+|++.++.||+
T Consensus 106 ~~~~qi~~aL~~LH~~~i~H~dl~p~nil 134 (294)
T PLN00009 106 TYLYQILRGIAYCHSHRVLHRDLKPQNLL 134 (294)
T ss_pred HHHHHHHHHHHHHHhCCeeCCCCCcceEE
Confidence 34468999999999999999999999876
No 252
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=84.92 E-value=0.44 Score=40.61 Aligned_cols=28 Identities=11% Similarity=0.116 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|++.++.+|+
T Consensus 105 ~~~qi~~~L~~LH~~~i~H~dl~p~ni~ 132 (282)
T cd07831 105 YMYQLLKSLDHMHRNGIFHRDIKPENIL 132 (282)
T ss_pred HHHHHHHHHHHHHHCCceecccCHHHEE
Confidence 4478999999999999999999999986
No 253
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=84.89 E-value=0.46 Score=45.16 Aligned_cols=29 Identities=14% Similarity=0.099 Sum_probs=26.3
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|++||++.|+|+|+++.|||
T Consensus 241 ~~~~qi~~aL~~LH~~~ivH~dikp~Nil 269 (400)
T cd05105 241 SFTYQVARGMEFLASKNCVHRDLAARNVL 269 (400)
T ss_pred HHHHHHHHHHHHHHhCCeeCCCCChHhEE
Confidence 45578999999999999999999999986
No 254
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=84.79 E-value=0.42 Score=39.79 Aligned_cols=30 Identities=17% Similarity=0.137 Sum_probs=26.4
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||+..|+|+|.++.||+
T Consensus 106 ~~~~~ql~~~l~~lh~~~~~h~dl~~~nil 135 (258)
T smart00219 106 LSFALQIARGMEYLESKNFIHRDLAARNCL 135 (258)
T ss_pred HHHHHHHHHHHHHHhcCCeeecccccceEE
Confidence 345578999999999999999999999985
No 255
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=84.76 E-value=0.47 Score=41.14 Aligned_cols=31 Identities=6% Similarity=0.124 Sum_probs=27.3
Q ss_pred CcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 222 SVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 222 ~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
......+|+.+|.+||+..|+|+|.++.+|+
T Consensus 111 ~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil 141 (267)
T PHA03390 111 VKKIIRQLVEALNDLHKHNIIHNDIKLENVL 141 (267)
T ss_pred HHHHHHHHHHHHHHHHhCCeeeCCCCHHHEE
Confidence 3445678999999999999999999999986
No 256
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=84.76 E-value=0.51 Score=40.69 Aligned_cols=28 Identities=14% Similarity=0.205 Sum_probs=25.4
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|+++.||+
T Consensus 100 ~~~ql~~~l~~lH~~~i~H~di~p~Nil 127 (277)
T cd05577 100 YAAQIICGLEHLHQRRIVYRDLKPENVL 127 (277)
T ss_pred HHHHHHHHHHHHHhCCcccCCCCHHHEE
Confidence 3468999999999999999999999986
No 257
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=84.74 E-value=0.5 Score=39.23 Aligned_cols=28 Identities=21% Similarity=0.177 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|+|.++.||+
T Consensus 104 ~~~~i~~~l~~lH~~~i~H~dl~p~ni~ 131 (254)
T cd06627 104 YVYQVLQGLAYLHEQGVIHRDIKAANIL 131 (254)
T ss_pred HHHHHHHHHHHHhhCCcccCCCCHHHEE
Confidence 4478999999999999999999999986
No 258
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=84.72 E-value=0.32 Score=50.70 Aligned_cols=27 Identities=11% Similarity=0.149 Sum_probs=25.1
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|..+..|||.|.|||+|.|+-|||
T Consensus 494 AqQiaqGM~YLHAK~IIHrDLKSnNIF 520 (678)
T KOG0193|consen 494 AQQIAQGMDYLHAKNIIHRDLKSNNIF 520 (678)
T ss_pred HHHHHHhhhhhhhhhhhhhhccccceE
Confidence 368889999999999999999999997
No 259
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=84.66 E-value=0.46 Score=39.75 Aligned_cols=29 Identities=14% Similarity=0.147 Sum_probs=25.8
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||+..|+|++.++.+|+
T Consensus 105 ~~~~~l~~~l~~lh~~~i~H~dl~~~nil 133 (257)
T cd08225 105 SWFVQISLGLKHIHDRKILHRDIKSQNIF 133 (257)
T ss_pred HHHHHHHHHHHHHHHCCcccccCCHHHEE
Confidence 34467999999999999999999999987
No 260
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=84.63 E-value=0.46 Score=40.76 Aligned_cols=29 Identities=17% Similarity=0.140 Sum_probs=26.0
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||+..|+|+|.++.||+
T Consensus 106 ~~~~~l~~aL~~lH~~~i~H~dl~p~Nil 134 (262)
T cd05071 106 DMAAQIASGMAYVERMNYVHRDLRAANIL 134 (262)
T ss_pred HHHHHHHHHHHHHHHCCccccccCcccEE
Confidence 34578999999999999999999999985
No 261
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=84.57 E-value=0.46 Score=40.21 Aligned_cols=28 Identities=14% Similarity=0.134 Sum_probs=25.3
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|+|.++.||+
T Consensus 108 ~~~~l~~~l~~LH~~~i~H~dl~p~nil 135 (261)
T cd05072 108 FSAQIAEGMAYIERKNYIHRDLRAANVL 135 (261)
T ss_pred HHHHHHHHHHHHHHCCeeccccchhhEE
Confidence 3468999999999999999999999986
No 262
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=84.57 E-value=0.44 Score=41.06 Aligned_cols=29 Identities=14% Similarity=0.146 Sum_probs=26.0
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||...|+|+|.++.||+
T Consensus 107 ~~~~qi~~~L~~LH~~~i~H~dlkp~nil 135 (282)
T cd06643 107 VVCKQTLEALNYLHENKIIHRDLKAGNIL 135 (282)
T ss_pred HHHHHHHHHHHHHHHCCeeecCCCcccEE
Confidence 34568999999999999999999999985
No 263
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=84.54 E-value=0.51 Score=41.56 Aligned_cols=32 Identities=13% Similarity=0.117 Sum_probs=27.7
Q ss_pred CCcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 221 QSVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 221 ~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+......+|+.+|.+||++.|+|+|.++.||+
T Consensus 117 ~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nil 148 (296)
T cd06654 117 QIAAVCRECLQALEFLHSNQVIHRDIKSDNIL 148 (296)
T ss_pred HHHHHHHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence 33455678999999999999999999999986
No 264
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=84.42 E-value=0.48 Score=41.35 Aligned_cols=28 Identities=18% Similarity=0.178 Sum_probs=25.6
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|++.++.||+
T Consensus 120 ~~~ql~~~l~~lH~~~i~H~dl~p~Nil 147 (285)
T cd06648 120 VCLAVLKALSFLHAQGVIHRDIKSDSIL 147 (285)
T ss_pred HHHHHHHHHHHHHhCCeecCCCChhhEE
Confidence 4478999999999999999999999985
No 265
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=84.38 E-value=0.4 Score=41.00 Aligned_cols=29 Identities=21% Similarity=0.150 Sum_probs=25.7
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.++.|||
T Consensus 110 ~i~~~i~~~l~~lH~~~i~h~dlkp~nil 138 (267)
T cd05066 110 GMLRGIASGMKYLSDMGYVHRDLAARNIL 138 (267)
T ss_pred HHHHHHHHHHHHHHHCCEeehhhchhcEE
Confidence 34467899999999999999999999985
No 266
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=84.36 E-value=0.47 Score=40.02 Aligned_cols=29 Identities=3% Similarity=0.045 Sum_probs=25.8
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|+|.++.+|+
T Consensus 104 ~~~~~i~~al~~lH~~~i~H~dl~p~nil 132 (255)
T cd08219 104 QWFVQMCLGVQHIHEKRVLHRDIKSKNIF 132 (255)
T ss_pred HHHHHHHHHHHHHhhCCcccCCCCcceEE
Confidence 34578999999999999999999999985
No 267
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=84.32 E-value=0.52 Score=42.58 Aligned_cols=30 Identities=7% Similarity=0.048 Sum_probs=26.7
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+++|++||+..|+|+++++.|||
T Consensus 117 ~~~~~qi~~aL~~LH~~givH~dikp~Nil 146 (342)
T cd07854 117 RLFMYQLLRGLKYIHSANVLHRDLKPANVF 146 (342)
T ss_pred HHHHHHHHHHHHHHHhCCcccCCCCHHHEE
Confidence 345678999999999999999999999986
No 268
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=84.20 E-value=0.53 Score=40.25 Aligned_cols=31 Identities=10% Similarity=0.055 Sum_probs=27.2
Q ss_pred CcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 222 SVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 222 ~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
......+|+.+|.+||++.|+|+|.++.+|+
T Consensus 101 ~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~ 131 (283)
T cd07830 101 IRSIIYQILQGLAHIHKHGFFHRDLKPENLL 131 (283)
T ss_pred HHHHHHHHHHHHHHHHHCCcccCCCChhhEE
Confidence 3445679999999999999999999999986
No 269
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=84.17 E-value=0.54 Score=42.44 Aligned_cols=29 Identities=10% Similarity=0.071 Sum_probs=26.3
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+...+|+.+|.+||++.|+|++.++.||+
T Consensus 112 ~~~~ql~~aL~~LH~~~iiH~dl~p~Nil 140 (328)
T cd07856 112 YFLYQILRGLKYVHSAGVVHRDLKPSNIL 140 (328)
T ss_pred HHHHHHHHHHHHHHhCCcccCCCCHHHEe
Confidence 45678999999999999999999999986
No 270
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=84.15 E-value=0.54 Score=41.60 Aligned_cols=28 Identities=14% Similarity=0.134 Sum_probs=25.6
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|++||+..|+|+|.++.|||
T Consensus 108 i~~~l~~~l~~LH~~gi~H~dlkp~nil 135 (330)
T cd07834 108 FLYQILRGLKYLHSANVIHRDLKPSNIL 135 (330)
T ss_pred HHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 4578999999999999999999999986
No 271
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=83.94 E-value=0.49 Score=53.06 Aligned_cols=28 Identities=14% Similarity=0.202 Sum_probs=26.0
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.+-+++++|.+||+..|.|||+|+||||
T Consensus 1339 yt~qll~gla~LH~~gIVHRDIK~aNI~ 1366 (1509)
T KOG4645|consen 1339 YTKQLLEGLAYLHEHGIVHRDIKPANIL 1366 (1509)
T ss_pred HHHHHHHHHHHHHhcCceecCCCcccee
Confidence 3568999999999999999999999997
No 272
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=83.91 E-value=0.53 Score=40.38 Aligned_cols=29 Identities=7% Similarity=0.015 Sum_probs=25.6
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||+..|+|++.++.+|+
T Consensus 104 ~~~~~i~~~l~~lh~~~i~H~~l~p~nil 132 (284)
T cd07860 104 SYLFQLLQGLAFCHSHRVLHRDLKPQNLL 132 (284)
T ss_pred HHHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence 34567999999999999999999999976
No 273
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=83.90 E-value=0.48 Score=39.76 Aligned_cols=28 Identities=11% Similarity=0.014 Sum_probs=25.0
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+..|.+||++.|+|+|.+++||+
T Consensus 98 ~~~~i~~~l~~lH~~~~~H~dl~p~nil 125 (250)
T cd05085 98 FALDAAAGMAYLESKNCIHRDLAARNCL 125 (250)
T ss_pred HHHHHHHHHHHHHhCCeeecccChheEE
Confidence 3467889999999999999999999976
No 274
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=83.83 E-value=0.5 Score=39.54 Aligned_cols=29 Identities=14% Similarity=0.067 Sum_probs=25.7
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||+..|+|++.++.+|+
T Consensus 103 ~~~~~l~~~l~~lh~~~i~H~dl~~~ni~ 131 (256)
T cd06612 103 AILYQTLKGLEYLHSNKKIHRDIKAGNIL 131 (256)
T ss_pred HHHHHHHHHHHHHHHCCcccCCCCcceEE
Confidence 34578899999999999999999999986
No 275
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=83.82 E-value=0.56 Score=42.50 Aligned_cols=29 Identities=3% Similarity=0.074 Sum_probs=26.0
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||+..|+|+|.+++||+
T Consensus 122 ~i~~qi~~al~~LH~~gi~H~dlkp~Nil 150 (343)
T cd07880 122 FLVYQMLKGLKYIHAAGIIHRDLKPGNLA 150 (343)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 34578999999999999999999999985
No 276
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=83.70 E-value=0.47 Score=42.05 Aligned_cols=27 Identities=11% Similarity=0.135 Sum_probs=25.1
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||+..|+|+|.++.|||
T Consensus 140 ~~qi~~aL~~lH~~gi~H~dlkp~Nil 166 (314)
T cd05099 140 AYQVARGMEYLESRRCIHRDLAARNVL 166 (314)
T ss_pred HHHHHHHHHHHHHCCeeeccccceeEE
Confidence 468999999999999999999999986
No 277
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=83.70 E-value=0.58 Score=42.29 Aligned_cols=28 Identities=4% Similarity=0.124 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|++.++.|||
T Consensus 122 ~~~qi~~aL~~LH~~~i~H~dlkp~NIl 149 (342)
T cd07879 122 LVYQMLCGLKYIHSAGIIHRDLKPGNLA 149 (342)
T ss_pred HHHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence 4578999999999999999999999985
No 278
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=83.63 E-value=0.59 Score=38.92 Aligned_cols=30 Identities=17% Similarity=0.073 Sum_probs=26.6
Q ss_pred cchhHHHHHHhhhhc-----cccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQ-----NQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~-----~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+|| +..|+|+|.++.||+
T Consensus 108 ~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nil 142 (265)
T cd08217 108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIF 142 (265)
T ss_pred HHHHHHHHHHHHHHhcCccccCcceecCCCHHHEE
Confidence 345678999999999 999999999999986
No 279
>PF14812 PBP1_TM: Transmembrane domain of transglycosylase PBP1 at N-terminal; PDB: 3FWL_A 3VMA_A.
Probab=83.57 E-value=0.35 Score=38.38 Aligned_cols=9 Identities=33% Similarity=0.693 Sum_probs=0.0
Q ss_pred CCceecCCC
Q 024658 132 ENQVVPWSG 140 (264)
Q Consensus 132 enqvVp~s~ 140 (264)
|.+.+|+-+
T Consensus 49 eee~m~rK~ 57 (81)
T PF14812_consen 49 EEEPMPRKG 57 (81)
T ss_dssp ---------
T ss_pred hcccccccc
Confidence 444566655
No 280
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=83.56 E-value=0.56 Score=42.94 Aligned_cols=25 Identities=8% Similarity=0.170 Sum_probs=23.4
Q ss_pred HHHHHhhhhccccccccCcchhhhH
Q 024658 228 AIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 228 ~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
++++.|+.||+..++|||+|++|++
T Consensus 130 q~l~~l~~lH~~G~iHRDiKp~N~~ 154 (322)
T KOG1164|consen 130 QNLNALEDLHSKGFIHRDIKPENFV 154 (322)
T ss_pred HHHHHHHHHHhcCcccCCcCHHHee
Confidence 7889999999999999999999975
No 281
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=83.54 E-value=0.51 Score=42.21 Aligned_cols=28 Identities=7% Similarity=0.126 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|.++.|||
T Consensus 112 i~~qi~~~L~~LH~~~i~H~dl~p~nil 139 (337)
T cd07852 112 IMYQLLKALKYIHSGNVIHRDLKPSNIL 139 (337)
T ss_pred HHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence 4578899999999999999999999976
No 282
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=83.41 E-value=0.6 Score=42.01 Aligned_cols=30 Identities=3% Similarity=0.040 Sum_probs=26.8
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|++||++.|+|++.++.||+
T Consensus 111 ~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil 140 (337)
T cd07858 111 QYFLYQLLRGLKYIHSANVLHRDLKPSNLL 140 (337)
T ss_pred HHHHHHHHHHHHHHHhCCEecCCCCHHHEE
Confidence 445678999999999999999999999985
No 283
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=83.41 E-value=0.62 Score=39.49 Aligned_cols=29 Identities=21% Similarity=0.212 Sum_probs=26.3
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||+..|+|+|.++.+|+
T Consensus 110 ~~~~~l~~~l~~lH~~~ivH~di~p~nil 138 (267)
T cd06628 110 NFVRQILKGLNYLHNRGIIHRDIKGANIL 138 (267)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCHHHEE
Confidence 44578999999999999999999999986
No 284
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=83.38 E-value=0.6 Score=39.32 Aligned_cols=29 Identities=10% Similarity=0.023 Sum_probs=25.9
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||+..|+|+|.++.+|+
T Consensus 105 ~~~~~l~~~l~~lh~~~i~h~dl~p~ni~ 133 (256)
T cd08221 105 WYLFQIVSAVSYIHKAGILHRDIKTLNIF 133 (256)
T ss_pred HHHHHHHHHHHHHHhCCccccCCChHhEE
Confidence 44578899999999999999999999986
No 285
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=83.37 E-value=0.61 Score=39.53 Aligned_cols=28 Identities=7% Similarity=0.101 Sum_probs=25.4
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|++||++.|+|++.++.+|+
T Consensus 98 ~~~~i~~~l~~lH~~~~~h~dl~~~nil 125 (262)
T cd05572 98 YIACVVLAFEYLHNRGIIYRDLKPENLL 125 (262)
T ss_pred HHHHHHHHHHHHhhCCcccCCCCHHHEE
Confidence 3467999999999999999999999996
No 286
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=83.28 E-value=0.63 Score=39.80 Aligned_cols=29 Identities=10% Similarity=0.235 Sum_probs=25.6
Q ss_pred chhHHHHHHhhhhccc-cccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQ-TMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~-~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||.+ .|+|+|.++.+||
T Consensus 107 ~~~~qi~~~l~~lH~~~~i~h~dlkp~nil 136 (283)
T cd06617 107 KIAVSIVKALEYLHSKLSVIHRDVKPSNVL 136 (283)
T ss_pred HHHHHHHHHHHHHhhcCCeecCCCCHHHEE
Confidence 4457899999999987 8999999999986
No 287
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=83.13 E-value=0.53 Score=40.27 Aligned_cols=28 Identities=14% Similarity=0.045 Sum_probs=25.3
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|+|.++.||+
T Consensus 105 ~~~qi~~al~~lH~~~i~H~dlkp~nil 132 (269)
T cd05087 105 MACEIALGLLHLHKNNFIHSDLALRNCL 132 (269)
T ss_pred HHHHHHHHHHHHHHCCEeccccCcceEE
Confidence 3468999999999999999999999976
No 288
>PTZ00415 transmission-blocking target antigen s230; Provisional
Probab=83.03 E-value=0.6 Score=53.78 Aligned_cols=15 Identities=33% Similarity=0.667 Sum_probs=8.7
Q ss_pred hhccccCCceecCCC
Q 024658 126 EEEEDDENQVVPWSG 140 (264)
Q Consensus 126 ~~ee~~enqvVp~s~ 140 (264)
+|+|+++.||-|+--
T Consensus 171 ~e~~~~~~~~~~~~d 185 (2849)
T PTZ00415 171 EEEEEEEEEIKGFDD 185 (2849)
T ss_pred cccccccccccCCCc
Confidence 444455557777754
No 289
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=83.02 E-value=0.63 Score=39.13 Aligned_cols=28 Identities=14% Similarity=0.175 Sum_probs=25.3
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|+|.++.||+
T Consensus 104 i~~~i~~~l~~lh~~~i~H~dl~~~nil 131 (264)
T cd06626 104 YTLQLLEGLAYLHSHGIVHRDIKPANIF 131 (264)
T ss_pred HHHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence 3478999999999999999999999985
No 290
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=82.96 E-value=0.6 Score=40.42 Aligned_cols=28 Identities=14% Similarity=0.135 Sum_probs=25.0
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|++||+..|+|++.++.+|+
T Consensus 133 ~~~qi~~al~~lH~~~ivH~dlkp~nil 160 (291)
T cd06639 133 ILYGALLGLQHLHNNRIIHRDVKGNNIL 160 (291)
T ss_pred HHHHHHHHHHHHHhCCeeccCCCHHHEE
Confidence 3467899999999999999999999985
No 291
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=82.88 E-value=0.58 Score=39.39 Aligned_cols=29 Identities=10% Similarity=0.069 Sum_probs=25.6
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||+..|+|+|.+++||+
T Consensus 104 ~~~~~l~~~l~~lH~~~i~h~dl~p~ni~ 132 (256)
T cd05112 104 GMCLDVCEGMAYLESSNVIHRDLAARNCL 132 (256)
T ss_pred HHHHHHHHHHHHHHHCCccccccccceEE
Confidence 34468899999999999999999999976
No 292
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=82.87 E-value=0.58 Score=42.45 Aligned_cols=28 Identities=7% Similarity=0.148 Sum_probs=25.2
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|++.++.||+
T Consensus 125 i~~qi~~aL~~LH~~~ivH~dlkp~NIl 152 (345)
T cd07877 125 LIYQILRGLKYIHSADIIHRDLKPSNLA 152 (345)
T ss_pred HHHHHHHHHHHHHHCCeeecCCChHHEE
Confidence 3468899999999999999999999986
No 293
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=82.86 E-value=0.61 Score=39.37 Aligned_cols=29 Identities=17% Similarity=0.171 Sum_probs=25.9
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||++.|+|+|.++.||+
T Consensus 107 ~~~~~i~~al~~lh~~~i~h~di~p~nil 135 (261)
T cd05034 107 DMAAQIAEGMAYLESRNYIHRDLAARNIL 135 (261)
T ss_pred HHHHHHHHHHHHHHhCCcccCCcchheEE
Confidence 44568899999999999999999999986
No 294
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=82.82 E-value=0.6 Score=44.50 Aligned_cols=28 Identities=14% Similarity=0.097 Sum_probs=25.4
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|+|.+++|||
T Consensus 244 ~~~qi~~aL~~LH~~~ivHrdlkp~NiL 271 (401)
T cd05107 244 FSYQVANGMEFLASKNCVHRDLAARNVL 271 (401)
T ss_pred HHHHHHHHHHHHhcCCcCcccCCcceEE
Confidence 4468999999999999999999999985
No 295
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=82.65 E-value=0.66 Score=39.63 Aligned_cols=28 Identities=14% Similarity=0.151 Sum_probs=25.3
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||+..|+|++.++.||+
T Consensus 106 i~~~i~~~l~~lh~~~i~H~dl~p~ni~ 133 (277)
T cd06917 106 IIREVLVALKYIHKVGVIHRDIKAANIL 133 (277)
T ss_pred HHHHHHHHHHHHHhCCcccCCcCHHHEE
Confidence 4467999999999999999999999986
No 296
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=82.62 E-value=0.66 Score=39.24 Aligned_cols=29 Identities=14% Similarity=0.099 Sum_probs=26.1
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|.|++.++.||+
T Consensus 104 ~~~~~i~~~l~~lh~~~i~h~dl~~~nil 132 (258)
T cd05578 104 FWICEIVLALEYLHSKGIIHRDIKPDNIL 132 (258)
T ss_pred HHHHHHHHHHHHHHhCCeeccCCCHHHeE
Confidence 34578999999999999999999999987
No 297
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=82.62 E-value=0.64 Score=39.79 Aligned_cols=29 Identities=7% Similarity=0.043 Sum_probs=25.9
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|++.++.+|+
T Consensus 104 ~~~~~i~~~l~~LH~~~i~h~~l~p~ni~ 132 (286)
T cd07846 104 KYLFQILRGIEFCHSHNIIHRDIKPENIL 132 (286)
T ss_pred HHHHHHHHHHHHHHHCCccccCCCHHHEE
Confidence 34568999999999999999999999986
No 298
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=82.61 E-value=0.66 Score=38.75 Aligned_cols=28 Identities=18% Similarity=0.201 Sum_probs=25.5
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|++.++.+|+
T Consensus 107 ~~~~i~~~l~~lH~~~i~H~dl~~~ni~ 134 (258)
T cd06632 107 YTRQILLGLEYLHDRNTVHRDIKGANIL 134 (258)
T ss_pred HHHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence 4568999999999999999999999985
No 299
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=82.55 E-value=0.37 Score=50.65 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=28.1
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
++-|+.|..+++|||.-+|||||.|+-|||
T Consensus 215 v~Wsk~IA~GM~YLH~hKIIHRDLKSPNiL 244 (904)
T KOG4721|consen 215 VDWSKGIAGGMNYLHLHKIIHRDLKSPNIL 244 (904)
T ss_pred HHHHHHhhhhhHHHHHhhHhhhccCCCceE
Confidence 377899999999999999999999999997
No 300
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=82.38 E-value=0.67 Score=39.03 Aligned_cols=29 Identities=10% Similarity=0.146 Sum_probs=25.8
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+...+|+.+|.+||+..|+|++.++.||+
T Consensus 110 ~~~~~l~~~l~~lh~~~i~h~dl~p~nil 138 (267)
T cd08224 110 KYFVQLCSALEHMHSKRIMHRDIKPANVF 138 (267)
T ss_pred HHHHHHHHHHHHHHhCCEecCCcChhhEE
Confidence 44578999999999999999999999975
No 301
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=82.37 E-value=0.66 Score=41.35 Aligned_cols=28 Identities=14% Similarity=0.040 Sum_probs=25.7
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+..|.+||.+.|+|+|.++.|||
T Consensus 147 ~~~~i~~~l~~lH~~GI~HrDlkp~NIL 174 (239)
T PRK01723 147 QWQAIGQLIARFHDAGVYHADLNAHNIL 174 (239)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCchhEE
Confidence 4568999999999999999999999996
No 302
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=82.32 E-value=0.66 Score=39.50 Aligned_cols=30 Identities=7% Similarity=0.076 Sum_probs=26.6
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..-..+|+.+|.+||+..|+|++.++.||+
T Consensus 110 ~~~~~~i~~al~~LH~~~i~h~~l~~~nil 139 (287)
T cd07838 110 KDLMRQLLRGVDFLHSHRIVHRDLKPQNIL 139 (287)
T ss_pred HHHHHHHHHHHHHHHHCCeeeccCChhhEE
Confidence 445678999999999999999999999985
No 303
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=82.26 E-value=0.64 Score=39.50 Aligned_cols=29 Identities=10% Similarity=0.053 Sum_probs=25.7
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|++.++.+|+
T Consensus 102 ~~~~~i~~~l~~LH~~~i~H~~l~~~ni~ 130 (282)
T cd07829 102 SIMYQLLRGLAYCHSHRILHRDLKPQNIL 130 (282)
T ss_pred HHHHHHHHHHHHHHHCCcccCCCChheEE
Confidence 34578999999999999999999999875
No 304
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=82.20 E-value=0.61 Score=40.16 Aligned_cols=29 Identities=10% Similarity=0.222 Sum_probs=25.0
Q ss_pred chhHHHHHHhhhhccc-cccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQ-TMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~-~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++ .|+|+|.++.||+
T Consensus 106 ~~~~~i~~~l~~LH~~~~i~H~dl~p~nil 135 (286)
T cd06622 106 RITYAVVKGLKFLKEEHNIIHRDVKPTNVL 135 (286)
T ss_pred HHHHHHHHHHHHHHhcCCEeeCCCCHHHEE
Confidence 4457899999999964 8999999999986
No 305
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=82.09 E-value=0.75 Score=37.66 Aligned_cols=28 Identities=18% Similarity=0.208 Sum_probs=25.3
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|++||++.|.|+|.++.||+
T Consensus 103 i~~~i~~~l~~lh~~~i~h~dl~p~ni~ 130 (253)
T cd05122 103 VCKELLKGLEYLHSNGIIHRDIKAANIL 130 (253)
T ss_pred HHHHHHHHHHHhhcCCEecCCCCHHHEE
Confidence 4568999999999999999999999985
No 306
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=82.05 E-value=0.63 Score=39.63 Aligned_cols=29 Identities=17% Similarity=0.137 Sum_probs=25.7
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+...+|+.+|.+||+..|+|+|+++.||+
T Consensus 106 ~~~~~l~~aL~~lH~~~i~H~dl~p~ni~ 134 (260)
T cd05073 106 DFSAQIAEGMAFIEQRNYIHRDLRAANIL 134 (260)
T ss_pred HHHHHHHHHHHHHHhCCccccccCcceEE
Confidence 34468999999999999999999999976
No 307
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=82.03 E-value=0.58 Score=39.80 Aligned_cols=30 Identities=20% Similarity=0.189 Sum_probs=26.1
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||+..|+|+|.+++||+
T Consensus 110 ~~~~~~l~~al~~lH~~~i~H~dlkp~Nil 139 (268)
T cd05063 110 VGMLRGIAAGMKYLSDMNYVHRDLAARNIL 139 (268)
T ss_pred HHHHHHHHHHHHHHHHCCeeccccchhhEE
Confidence 344567889999999999999999999986
No 308
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=81.91 E-value=0.71 Score=39.99 Aligned_cols=31 Identities=10% Similarity=0.057 Sum_probs=27.3
Q ss_pred CcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 222 SVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 222 ~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+-..+|+.+|.+||+..|+|++.++.+|+
T Consensus 118 ~~~i~~qi~~aL~~LH~~~i~H~dl~p~nil 148 (302)
T cd07864 118 IKSFMKQLLEGLNYCHKKNFLHRDIKCSNIL 148 (302)
T ss_pred HHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 3455678999999999999999999999986
No 309
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=81.90 E-value=0.7 Score=40.64 Aligned_cols=27 Identities=11% Similarity=0.091 Sum_probs=24.5
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||+..|+|+|.++.||+
T Consensus 107 ~~~i~~~l~~lH~~~i~H~dl~p~NIl 133 (305)
T cd05609 107 FAETVLALEYLHNYGIVHRDLKPDNLL 133 (305)
T ss_pred HHHHHHHHHHHHHCCccccCCchHHEE
Confidence 357889999999999999999999985
No 310
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=81.78 E-value=0.73 Score=39.10 Aligned_cols=30 Identities=10% Similarity=0.127 Sum_probs=26.4
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhHh
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAITG 253 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~~ 253 (264)
....+|+.+|.+||+..|+|++.++.||+=
T Consensus 106 ~~~~qi~~~l~~lH~~~i~H~dl~p~nil~ 135 (265)
T cd06631 106 KYTKQILDGVAYLHNNCVVHRDIKGNNVML 135 (265)
T ss_pred HHHHHHHHHHHHHHhCCcccCCcCHHhEEE
Confidence 345789999999999999999999999873
No 311
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=81.62 E-value=0.69 Score=41.13 Aligned_cols=28 Identities=18% Similarity=0.191 Sum_probs=25.3
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|++.++.||+
T Consensus 130 i~~~i~~~l~~lH~~~i~H~dL~p~Nil 157 (317)
T cd06635 130 ITHGALQGLAYLHSHNMIHRDIKAGNIL 157 (317)
T ss_pred HHHHHHHHHHHHHHCCcccCCCCcccEE
Confidence 3467999999999999999999999986
No 312
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=81.57 E-value=0.68 Score=40.78 Aligned_cols=29 Identities=14% Similarity=0.106 Sum_probs=25.9
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||+..|+|++.++.+|+
T Consensus 119 ~~~~ql~~~L~~LH~~~i~H~dl~p~nIl 147 (307)
T cd06607 119 AICHGALQGLAYLHSHERIHRDIKAGNIL 147 (307)
T ss_pred HHHHHHHHHHHHHHHCCceecCCCcccEE
Confidence 34578999999999999999999999986
No 313
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=81.54 E-value=0.75 Score=40.62 Aligned_cols=29 Identities=17% Similarity=0.207 Sum_probs=26.3
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|++||++.|+|+|.+++||+
T Consensus 120 ~~~~ql~~~l~~lH~~givH~dl~p~Nil 148 (292)
T cd06657 120 AVCLAVLKALSVLHAQGVIHRDIKSDSIL 148 (292)
T ss_pred HHHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence 45578999999999999999999999986
No 314
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=81.46 E-value=0.69 Score=40.70 Aligned_cols=27 Identities=11% Similarity=0.078 Sum_probs=24.8
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||+..|+|+|.++.||+
T Consensus 109 ~~qi~~~l~~lH~~~i~H~dlkp~Nil 135 (316)
T cd05574 109 AAEVLLALEYLHLLGIVYRDLKPENIL 135 (316)
T ss_pred HHHHHHHHHHHHHCCeeccCCChHHeE
Confidence 458999999999999999999999986
No 315
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=81.32 E-value=0.81 Score=39.14 Aligned_cols=30 Identities=17% Similarity=0.079 Sum_probs=26.6
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||++.|+|++.++.+|+
T Consensus 101 ~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~ 130 (274)
T cd06609 101 AFILREVLLGLEYLHEEGKIHRDIKAANIL 130 (274)
T ss_pred HHHHHHHHHHHHHHHhCCcccCCCCHHHEE
Confidence 445578999999999999999999999986
No 316
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=81.11 E-value=0.77 Score=38.62 Aligned_cols=31 Identities=6% Similarity=-0.018 Sum_probs=27.0
Q ss_pred CcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 222 SVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 222 ~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...-..+|+..|.+||...|+|+|.+++||+
T Consensus 127 ~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nil 157 (198)
T cd05144 127 PEEVLDEILEEIVKAYKHGIIHGDLSEFNIL 157 (198)
T ss_pred HHHHHHHHHHHHHHHHHCCCCcCCCCcccEE
Confidence 3445578999999999999999999999985
No 317
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=81.10 E-value=0.79 Score=39.08 Aligned_cols=27 Identities=11% Similarity=0.196 Sum_probs=24.9
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||++.|+|+|.++.+|+
T Consensus 114 ~~qi~~~l~~lH~~~i~H~dl~~~nil 140 (272)
T cd06629 114 TEQVLEGLAYLHSKGILHRDLKADNLL 140 (272)
T ss_pred HHHHHHHHHHHhhCCeeecCCChhhEE
Confidence 468999999999999999999999986
No 318
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=80.92 E-value=0.82 Score=40.28 Aligned_cols=30 Identities=10% Similarity=0.107 Sum_probs=26.6
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||+..|+|+|.++.||+
T Consensus 118 ~~~~~~l~~~L~~LH~~~i~H~dL~p~Nil 147 (297)
T cd06656 118 AAVCRECLQALDFLHSNQVIHRDIKSDNIL 147 (297)
T ss_pred HHHHHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence 345578999999999999999999999986
No 319
>PTZ00415 transmission-blocking target antigen s230; Provisional
Probab=80.89 E-value=0.85 Score=52.62 Aligned_cols=6 Identities=17% Similarity=0.373 Sum_probs=3.0
Q ss_pred ccccCC
Q 024658 48 VCQSLT 53 (264)
Q Consensus 48 ~C~~~p 53 (264)
.|+.|.
T Consensus 95 ~~~~~~ 100 (2849)
T PTZ00415 95 TCPFHK 100 (2849)
T ss_pred cCcccc
Confidence 455544
No 320
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=80.70 E-value=0.8 Score=44.97 Aligned_cols=29 Identities=3% Similarity=0.000 Sum_probs=26.8
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+..-+|+.++.+.|+..|||||+|+-|||
T Consensus 105 ~~l~Q~l~ai~~cHk~n~IHRDIKPENIL 133 (396)
T KOG0593|consen 105 KYLYQLLKAIHFCHKNNCIHRDIKPENIL 133 (396)
T ss_pred HHHHHHHHHhhhhhhcCeecccCChhheE
Confidence 45678999999999999999999999998
No 321
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=80.51 E-value=0.8 Score=43.92 Aligned_cols=26 Identities=12% Similarity=0.139 Sum_probs=25.0
Q ss_pred HHHHHHhhhhccccccccCcchhhhH
Q 024658 227 TAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 227 t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.|||.++.|+|+..|.|||.|+-|||
T Consensus 127 ~Qlisav~y~H~~gi~HRDLK~ENil 152 (370)
T KOG0583|consen 127 RQLISAVAYCHSRGIVHRDLKPENIL 152 (370)
T ss_pred HHHHHHHHHHHhCCEeeCCCCHHHEE
Confidence 89999999999999999999999986
No 322
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=80.44 E-value=0.83 Score=39.56 Aligned_cols=27 Identities=15% Similarity=0.059 Sum_probs=24.7
Q ss_pred HHHHHHhhhhccccccccCcchhhhHh
Q 024658 227 TAIISSLRGLQNQTMTDQGDAAAAITG 253 (264)
Q Consensus 227 t~i~~sl~~l~~~~i~~~d~~~a~i~~ 253 (264)
.+|+.+|.+||+..|+|+|.++.|||-
T Consensus 112 ~qi~~al~~lH~~~i~H~dl~p~nil~ 138 (290)
T cd05613 112 GEIVLALEHLHKLGIIYRDIKLENILL 138 (290)
T ss_pred HHHHHHHHHHHhCCeeccCCCHHHeEE
Confidence 479999999999999999999999863
No 323
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=80.34 E-value=0.86 Score=38.25 Aligned_cols=29 Identities=14% Similarity=0.134 Sum_probs=25.9
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|++.++.+|+
T Consensus 106 ~~~~ql~~al~~lh~~~i~h~~l~p~ni~ 134 (267)
T cd06610 106 TVLKEVLKGLEYLHSNGQIHRDIKAGNIL 134 (267)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCHHhEE
Confidence 34578999999999999999999999986
No 324
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=80.32 E-value=0.8 Score=50.14 Aligned_cols=14 Identities=21% Similarity=0.327 Sum_probs=7.2
Q ss_pred cccccccccccCCC
Q 024658 41 LRCLLCHVCQSLTP 54 (264)
Q Consensus 41 ~RvpLC~~C~~~p~ 54 (264)
.|.+|-+.|-.++.
T Consensus 1358 v~R~~~Dlct~~~D 1371 (1516)
T KOG1832|consen 1358 VDRCLLDLCTEPTD 1371 (1516)
T ss_pred cccchhhhhcCCcc
Confidence 34444456665553
No 325
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=80.08 E-value=0.91 Score=38.81 Aligned_cols=29 Identities=7% Similarity=0.056 Sum_probs=26.1
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||.+.|+|++.++.+|+
T Consensus 104 ~~~~~i~~~l~~LH~~~i~H~dl~~~ni~ 132 (288)
T cd07833 104 SYIWQLLQAIAYCHSHNIIHRDIKPENIL 132 (288)
T ss_pred HHHHHHHHHHHHHHHCCeecCCCCHHHeE
Confidence 34568999999999999999999999987
No 326
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=79.93 E-value=0.8 Score=45.77 Aligned_cols=29 Identities=14% Similarity=0.116 Sum_probs=26.5
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
++..||-.+|+.||.+.|||||.|+-|||
T Consensus 113 ~Fm~QLA~alq~L~~~~IiHRDLKPQNiL 141 (429)
T KOG0595|consen 113 HFMQQLASALQFLHENNIIHRDLKPQNIL 141 (429)
T ss_pred HHHHHHHHHHHHHHHCCeeeccCCcceEE
Confidence 44578999999999999999999999998
No 327
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=79.78 E-value=0.87 Score=37.71 Aligned_cols=29 Identities=10% Similarity=0.011 Sum_probs=26.0
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-..+|...|.+||++.|+|+|.++.||+
T Consensus 94 ~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil 122 (199)
T TIGR03724 94 ELLREIGRLVGKLHKAGIVHGDLTTSNII 122 (199)
T ss_pred HHHHHHHHHHHHHHHCCeecCCCCcceEE
Confidence 44678999999999999999999999985
No 328
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=79.69 E-value=0.98 Score=37.15 Aligned_cols=30 Identities=17% Similarity=0.174 Sum_probs=26.7
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||+..|+|++.++.+|+
T Consensus 104 ~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~ 133 (260)
T cd06606 104 RKYTRQILEGLAYLHSNGIVHRDIKGANIL 133 (260)
T ss_pred HHHHHHHHHHHHHHHHCCccccCCCHHHEE
Confidence 345678999999999999999999999986
No 329
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=79.58 E-value=0.85 Score=45.21 Aligned_cols=34 Identities=9% Similarity=0.181 Sum_probs=28.4
Q ss_pred CCCCcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 219 HGQSVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 219 ~~~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+++.---.-|++.+|++||..-|+|||.|.+|+|
T Consensus 176 ~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLL 209 (419)
T KOG0663|consen 176 PGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLL 209 (419)
T ss_pred hHHHHHHHHHHHHHHHHHhhceeEecccchhhee
Confidence 3344444568999999999999999999999987
No 330
>smart00090 RIO RIO-like kinase.
Probab=79.46 E-value=0.95 Score=40.41 Aligned_cols=30 Identities=13% Similarity=0.144 Sum_probs=26.5
Q ss_pred cchhHHHHHHhhhhcccc-ccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQT-MTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~-i~~~d~~~a~i~ 252 (264)
.....+|+..|.+||.+. |+|+|.++.||+
T Consensus 151 ~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIl 181 (237)
T smart00090 151 FELYDDILEEMRKLYKEGELVHGDLSEYNIL 181 (237)
T ss_pred HHHHHHHHHHHHHHHhcCCEEeCCCChhhEE
Confidence 345678999999999999 999999999984
No 331
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=79.30 E-value=0.87 Score=39.58 Aligned_cols=30 Identities=10% Similarity=0.135 Sum_probs=26.4
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||+..|+|+|.++.||+
T Consensus 113 ~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil 142 (292)
T cd06644 113 QVICRQMLEALQYLHSMKIIHRDLKAGNVL 142 (292)
T ss_pred HHHHHHHHHHHHHHhcCCeeecCCCcceEE
Confidence 344578899999999999999999999986
No 332
>PRK12274 serine/threonine protein kinase; Provisional
Probab=79.29 E-value=0.87 Score=41.64 Aligned_cols=28 Identities=14% Similarity=-0.038 Sum_probs=25.1
Q ss_pred hhHHHHHHhhhhccccccccCc-chhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGD-AAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~-~~a~i~ 252 (264)
...+|+..|++||.+.|+|+|. +++|||
T Consensus 96 ~~~qi~~~L~~lH~~GIvHrDL~kp~NIL 124 (218)
T PRK12274 96 YFRAARRLLQQLHRCGVAHNDLAKEANWL 124 (218)
T ss_pred HHHHHHHHHHHHHHCcCccCCCCCcceEE
Confidence 4578899999999999999999 788887
No 333
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=79.11 E-value=0.93 Score=45.58 Aligned_cols=28 Identities=11% Similarity=0.191 Sum_probs=25.2
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|||.|++|||
T Consensus 314 i~~ql~~aL~~lH~~~ivHrDLKp~NIL 341 (507)
T PLN03224 314 VMRQVLTGLRKLHRIGIVHRDIKPENLL 341 (507)
T ss_pred HHHHHHHHHHHHHHCCeecCCCchHhEE
Confidence 3467888999999999999999999996
No 334
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=79.05 E-value=0.9 Score=47.34 Aligned_cols=30 Identities=20% Similarity=0.157 Sum_probs=26.8
Q ss_pred cchhHHHHHHhhhhcccc--ccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQT--MTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~--i~~~d~~~a~i~ 252 (264)
.+-.++|+++|+|||+++ |||||.|=-|||
T Consensus 146 k~W~RQILkGL~yLHs~~PPIIHRDLKCDNIF 177 (632)
T KOG0584|consen 146 KSWCRQILKGLVYLHSQDPPIIHRDLKCDNIF 177 (632)
T ss_pred HHHHHHHHHHhhhhhcCCCCccccccccceEE
Confidence 467899999999999986 999999998885
No 335
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=79.05 E-value=1 Score=39.69 Aligned_cols=30 Identities=7% Similarity=0.091 Sum_probs=26.3
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||+..|+|+|.++.||+
T Consensus 118 ~~i~~~l~~al~~LH~~~i~H~dL~p~Nil 147 (296)
T cd06655 118 AAVCRECLQALEFLHANQVIHRDIKSDNVL 147 (296)
T ss_pred HHHHHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence 344568999999999999999999999986
No 336
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=79.03 E-value=0.99 Score=44.57 Aligned_cols=28 Identities=4% Similarity=-0.016 Sum_probs=25.6
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|...|.+||+..|+|||.+++|||
T Consensus 433 ~~~~i~~~L~~lH~~giiHrDlkp~NIL 460 (535)
T PRK09605 433 LVRKVGEIVAKLHKAGIVHGDLTTSNFI 460 (535)
T ss_pred HHHHHHHHHHHHHhCCCccCCCChHHEE
Confidence 3478899999999999999999999997
No 337
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=78.79 E-value=1 Score=39.84 Aligned_cols=28 Identities=18% Similarity=0.207 Sum_probs=25.1
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+..|+|+|.++.|||
T Consensus 120 ~~~~l~~~l~~LH~~~i~H~dl~p~nil 147 (308)
T cd06634 120 VTHGALQGLAYLHSHNMIHRDVKAGNIL 147 (308)
T ss_pred HHHHHHHHHHHHHhCCcccCCCCHHhEE
Confidence 3467889999999999999999999986
No 338
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=78.67 E-value=1 Score=40.74 Aligned_cols=30 Identities=20% Similarity=0.209 Sum_probs=25.3
Q ss_pred chhHHHHHHhhhhccc-cccccCcchhhhHh
Q 024658 224 SRSTAIISSLRGLQNQ-TMTDQGDAAAAITG 253 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~-~i~~~d~~~a~i~~ 253 (264)
....+|+.+|.+||++ .|+|+|.++.|||-
T Consensus 107 ~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili 137 (333)
T cd06650 107 KVSIAVIKGLTYLREKHKIMHRDVKPSNILV 137 (333)
T ss_pred HHHHHHHHHHHHHHhcCCEEecCCChhhEEE
Confidence 3456899999999975 69999999999873
No 339
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=78.65 E-value=1.1 Score=40.49 Aligned_cols=30 Identities=10% Similarity=0.101 Sum_probs=26.5
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||+..|+|++.++.||+
T Consensus 121 ~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil 150 (343)
T cd07851 121 QFLVYQILRGLKYIHSAGIIHRDLKPSNIA 150 (343)
T ss_pred HHHHHHHHHHHHHHHHCCeecCCCCHHHeE
Confidence 345578999999999999999999999985
No 340
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=78.60 E-value=1.1 Score=37.93 Aligned_cols=30 Identities=7% Similarity=0.065 Sum_probs=26.3
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||+..|+|++.++.+|+
T Consensus 109 ~~~~~~l~~~l~~lH~~~i~h~~l~~~nil 138 (260)
T cd08222 109 CEWFIQLLLGVHYMHQRRILHRDLKAKNIF 138 (260)
T ss_pred HHHHHHHHHHHHHHHHcCccccCCChhheE
Confidence 344568999999999999999999999985
No 341
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=78.46 E-value=1 Score=40.04 Aligned_cols=28 Identities=18% Similarity=0.191 Sum_probs=25.8
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|++.++.+|+
T Consensus 126 ~~~qi~~al~~LH~~gi~H~dl~p~nil 153 (313)
T cd06633 126 ITHGALQGLAYLHSHNMIHRDIKAGNIL 153 (313)
T ss_pred HHHHHHHHHHHHHHCCeecCCCChhhEE
Confidence 4578999999999999999999999987
No 342
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=78.41 E-value=0.69 Score=44.71 Aligned_cols=31 Identities=19% Similarity=0.350 Sum_probs=26.5
Q ss_pred HHHHHHhhhhccccccccCcchhhhH----hhhhc
Q 024658 227 TAIISSLRGLQNQTMTDQGDAAAAIT----GICRL 257 (264)
Q Consensus 227 t~i~~sl~~l~~~~i~~~d~~~a~i~----~ic~l 257 (264)
..++++|.+||.-+|+|||.|+||+| ||=||
T Consensus 131 k~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilkl 165 (376)
T KOG0669|consen 131 KGLMNGLYYIHRNKILHRDMKAANVLITKDGILKL 165 (376)
T ss_pred HHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEe
Confidence 45788999999999999999999987 55444
No 343
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=78.34 E-value=1.1 Score=37.45 Aligned_cols=29 Identities=17% Similarity=0.222 Sum_probs=25.5
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||+..|+|++.++.+|+
T Consensus 107 ~~~~~l~~al~~lh~~~i~h~~l~~~ni~ 135 (256)
T cd08530 107 RIFIQLLRGLQALHEQKILHRDLKSANIL 135 (256)
T ss_pred HHHHHHHHHHHHHhhCCcccCCCCcceEE
Confidence 34467999999999999999999999975
No 344
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=78.17 E-value=1.1 Score=38.75 Aligned_cols=27 Identities=15% Similarity=0.102 Sum_probs=24.6
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+.+|.+||++.|+|+|.++.||+
T Consensus 111 ~~ql~~~l~~lH~~~~~H~dl~p~nil 137 (288)
T cd05583 111 IAEIVLALDHLHQLGIIYRDIKLENIL 137 (288)
T ss_pred HHHHHHHHHHHHHCCeeccCCCHHHeE
Confidence 358999999999999999999999985
No 345
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=78.08 E-value=1.1 Score=38.70 Aligned_cols=30 Identities=17% Similarity=0.181 Sum_probs=25.5
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.+-..+|+.+|.+||++.|+|++..+.+||
T Consensus 106 ~~i~~~i~~~l~~Lh~~~iiH~~l~~~nil 135 (259)
T PF07714_consen 106 LSIAIQIAEALSYLHSNNIIHGNLSPSNIL 135 (259)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEST-SGGGEE
T ss_pred cccccccccccccccccccccccccccccc
Confidence 344578999999999999999999999886
No 346
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=78.02 E-value=0.44 Score=49.48 Aligned_cols=28 Identities=14% Similarity=0.170 Sum_probs=26.0
Q ss_pred hHHHHHHhhhhccccccccCcchhhhHh
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAITG 253 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~~ 253 (264)
..+|+..+.+||.|.|++||.++.|||=
T Consensus 421 ~~~lv~Av~~LH~~gvvhRDLkp~NIL~ 448 (612)
T KOG0603|consen 421 AAELVSAVDYLHEQGVVHRDLKPGNILL 448 (612)
T ss_pred HHHHHHHHHHHHhcCeeecCCChhheee
Confidence 3789999999999999999999999983
No 347
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=78.01 E-value=1.3 Score=37.34 Aligned_cols=28 Identities=14% Similarity=0.229 Sum_probs=25.1
Q ss_pred hhHHHHHHhhhhcc-ccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQN-QTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~-~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+ ..|+|++.++.||+
T Consensus 105 ~~~~l~~~l~~lH~~~~i~H~dl~~~ni~ 133 (265)
T cd06605 105 IAVAVLKGLTYLHEKHKIIHRDVKPSNIL 133 (265)
T ss_pred HHHHHHHHHHHHcCCCCeecCCCCHHHEE
Confidence 34688999999999 99999999999985
No 348
>PRK14879 serine/threonine protein kinase; Provisional
Probab=78.01 E-value=1.1 Score=37.34 Aligned_cols=28 Identities=11% Similarity=0.036 Sum_probs=24.8
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|...|.+||++.|+|+|.+++|||
T Consensus 100 i~~~i~~~l~~lH~~~i~H~Dl~p~Nil 127 (211)
T PRK14879 100 LSREIGRLVGKLHSAGIIHGDLTTSNMI 127 (211)
T ss_pred HHHHHHHHHHHHHhCCcccCCCCcccEE
Confidence 3467888999999999999999999985
No 349
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=77.83 E-value=1.2 Score=36.92 Aligned_cols=30 Identities=10% Similarity=0.107 Sum_probs=26.6
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||++.|+|++.++.+|+
T Consensus 106 ~~i~~~i~~~l~~lh~~~~~H~dl~~~nil 135 (258)
T cd08215 106 LDWFVQLCLALKYLHSRKILHRDIKPQNIF 135 (258)
T ss_pred HHHHHHHHHHHHHHHhCCEecccCChHHeE
Confidence 345678999999999999999999999976
No 350
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=77.82 E-value=1.2 Score=38.30 Aligned_cols=30 Identities=17% Similarity=0.168 Sum_probs=26.9
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||...|+|++.++.||+
T Consensus 104 ~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil 133 (277)
T cd06640 104 ATMLKEILKGLDYLHSEKKIHRDIKAANVL 133 (277)
T ss_pred HHHHHHHHHHHHHHHhCCccCcCCChhhEE
Confidence 355678999999999999999999999987
No 351
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=77.73 E-value=1.1 Score=38.41 Aligned_cols=29 Identities=17% Similarity=0.157 Sum_probs=25.8
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||++.|+|++.++.||+
T Consensus 105 ~~~~~i~~~l~~lH~~~ivH~dl~p~ni~ 133 (277)
T cd06642 105 TILREILKGLDYLHSERKIHRDIKAANVL 133 (277)
T ss_pred HHHHHHHHHHHHHhcCCeeccCCChheEE
Confidence 34478999999999999999999999985
No 352
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=77.72 E-value=1.5 Score=41.73 Aligned_cols=32 Identities=3% Similarity=-0.111 Sum_probs=27.5
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhHhhh
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAITGIC 255 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~~ic 255 (264)
--..++.+.|.|.|.+.|||||+|++|+|==|
T Consensus 128 ~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~ 159 (281)
T KOG0580|consen 128 TYIKQLANALLYCHLKRVIHRDIKPENLLLGS 159 (281)
T ss_pred HHHHHHHHHHHHhccCCcccCCCCHHHhccCC
Confidence 34578889999999999999999999998544
No 353
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=77.65 E-value=0.98 Score=48.94 Aligned_cols=28 Identities=7% Similarity=0.043 Sum_probs=25.4
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|||.|+.|||
T Consensus 118 I~~QIa~AL~yLHs~GIIHRDLKPeNIL 145 (932)
T PRK13184 118 IFHKICATIEYVHSKGVLHRDLKPDNIL 145 (932)
T ss_pred HHHHHHHHHHHHHHCCccccCCchheEE
Confidence 3468999999999999999999999996
No 354
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=77.63 E-value=1.3 Score=36.25 Aligned_cols=33 Identities=12% Similarity=0.070 Sum_probs=27.9
Q ss_pred CCCcchhHHHHHHhhhhcc-ccccccCcchhhhH
Q 024658 220 GQSVSRSTAIISSLRGLQN-QTMTDQGDAAAAIT 252 (264)
Q Consensus 220 ~~~~s~~t~i~~sl~~l~~-~~i~~~d~~~a~i~ 252 (264)
.+......+|+..|..||. ..|+|+|.++.||+
T Consensus 114 ~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nil 147 (187)
T cd05119 114 EDPEELYDQILELMRKLYREAGLVHGDLSEYNIL 147 (187)
T ss_pred ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEE
Confidence 3444556789999999999 99999999999985
No 355
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=77.42 E-value=0.81 Score=48.57 Aligned_cols=26 Identities=19% Similarity=0.183 Sum_probs=23.8
Q ss_pred HHHHHHhhhhccccccccCcchhhhH
Q 024658 227 TAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 227 t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+..+.||+|||++.-+|||+|+||||
T Consensus 119 Retl~gl~ylhs~gk~hRdiKGanil 144 (829)
T KOG0576|consen 119 RETLQGLKYLHSQGKIHRDIKGANIL 144 (829)
T ss_pred hhhhccchhhhcCCccccccccccee
Confidence 45678999999999999999999997
No 356
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=77.38 E-value=1.1 Score=38.58 Aligned_cols=29 Identities=14% Similarity=0.206 Sum_probs=24.5
Q ss_pred chhHHHHHHhhhhccc-cccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQ-TMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~-~i~~~d~~~a~i~ 252 (264)
...-+|+.+|++||.+ .|+|+|.++.||+
T Consensus 111 ~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil 140 (288)
T cd06616 111 KIAVATVKALNYLKEELKIIHRDVKPSNIL 140 (288)
T ss_pred HHHHHHHHHHHHHhhcCCeeccCCCHHHEE
Confidence 3446788999999964 8999999999986
No 357
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=77.18 E-value=0.79 Score=43.16 Aligned_cols=26 Identities=12% Similarity=0.258 Sum_probs=23.1
Q ss_pred HHHHHHhhhhccc-cccccCcchhhhH
Q 024658 227 TAIISSLRGLQNQ-TMTDQGDAAAAIT 252 (264)
Q Consensus 227 t~i~~sl~~l~~~-~i~~~d~~~a~i~ 252 (264)
--||..|.+||.| .|||||.|++|||
T Consensus 155 ~Svv~al~~L~~kL~vIHRDvKPsNiL 181 (282)
T KOG0984|consen 155 VSVVHALEFLHSKLSVIHRDVKPSNIL 181 (282)
T ss_pred HHHHHHHHHHHHHhhhhhccCCcceEE
Confidence 3588999999987 6999999999996
No 358
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=77.12 E-value=1.5 Score=48.07 Aligned_cols=6 Identities=33% Similarity=0.274 Sum_probs=2.3
Q ss_pred cCCCCC
Q 024658 97 ISGHDE 102 (264)
Q Consensus 97 ~~~~d~ 102 (264)
+.++||
T Consensus 1404 ~dd~De 1409 (1516)
T KOG1832|consen 1404 DDDSDE 1409 (1516)
T ss_pred ccccCc
Confidence 333433
No 359
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=77.12 E-value=1.3 Score=37.05 Aligned_cols=29 Identities=10% Similarity=0.147 Sum_probs=25.8
Q ss_pred chhHHHHHHhhhhcc-ccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQN-QTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~-~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||+ +.|+|++.++.+|+
T Consensus 103 ~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~ 132 (264)
T cd06623 103 YIARQILKGLDYLHTKRHIIHRDIKPSNLL 132 (264)
T ss_pred HHHHHHHHHHHHHhccCCCccCCCCHHHEE
Confidence 345689999999999 99999999999986
No 360
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=76.97 E-value=1.2 Score=46.17 Aligned_cols=29 Identities=14% Similarity=0.066 Sum_probs=27.0
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+++|+.+|..||...|||.|.|+.|||
T Consensus 293 ~~~~Qil~~L~~L~~l~IIHcDLKPENIL 321 (586)
T KOG0667|consen 293 KFAQQILTALLFLHELGIIHCDLKPENIL 321 (586)
T ss_pred HHHHHHHHHHHHHHhCCeeeccCChhhee
Confidence 45689999999999999999999999998
No 361
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=76.96 E-value=1.2 Score=39.48 Aligned_cols=29 Identities=17% Similarity=0.228 Sum_probs=25.4
Q ss_pred chhHHHHHHhhhhcc-ccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQN-QTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~-~~i~~~d~~~a~i~ 252 (264)
.-..+|+.+|.+||+ ..|+|+|.++.|||
T Consensus 103 ~~~~~i~~~l~~lH~~~~i~H~dl~p~nil 132 (308)
T cd06615 103 KISIAVLRGLTYLREKHKIMHRDVKPSNIL 132 (308)
T ss_pred HHHHHHHHHHHHHHhhCCEEECCCChHHEE
Confidence 445789999999997 47999999999987
No 362
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=76.75 E-value=1.1 Score=45.58 Aligned_cols=26 Identities=15% Similarity=0.184 Sum_probs=24.7
Q ss_pred HHHHHHhhhhccccccccCcchhhhH
Q 024658 227 TAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 227 t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
++++++|.|||.+.-||||.|+.+||
T Consensus 133 re~LkaL~YLH~~G~IHRdvKAgnIL 158 (516)
T KOG0582|consen 133 REVLKALDYLHQNGHIHRDVKAGNIL 158 (516)
T ss_pred HHHHHHHHHHHhcCceecccccccEE
Confidence 67889999999999999999999997
No 363
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=76.35 E-value=1.4 Score=37.24 Aligned_cols=30 Identities=13% Similarity=0.113 Sum_probs=26.8
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..-..+|+.+|.+||+..|.|+|.++.||+
T Consensus 105 ~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~ 134 (280)
T cd05581 105 RFYAAEILLALEYLHSKGIIHRDLKPENIL 134 (280)
T ss_pred HHHHHHHHHHHHHHHHCCeeecCCCHHHeE
Confidence 344578999999999999999999999998
No 364
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=75.98 E-value=1.3 Score=37.25 Aligned_cols=28 Identities=11% Similarity=0.131 Sum_probs=25.2
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||++.|+|++.++.+|+
T Consensus 106 ~~~~l~~~l~~lh~~~i~h~~l~~~nil 133 (256)
T cd08218 106 WFVQICLALKHVHDRKILHRDIKSQNIF 133 (256)
T ss_pred HHHHHHHHHHHHHhCCEecCCCCHHHEE
Confidence 3467999999999999999999999987
No 365
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=75.97 E-value=1.4 Score=34.16 Aligned_cols=29 Identities=14% Similarity=0.111 Sum_probs=25.6
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+..|++||++.|.|+|.++.||+
T Consensus 96 ~~~~~l~~~l~~lh~~~~~H~dl~~~ni~ 124 (215)
T cd00180 96 RILLQILEGLEYLHSNGIIHRDLKPENIL 124 (215)
T ss_pred HHHHHHHHHHHHHHhCCeeccCCCHhhEE
Confidence 34578899999999999999999999986
No 366
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=75.69 E-value=1.5 Score=38.18 Aligned_cols=28 Identities=11% Similarity=0.205 Sum_probs=25.0
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.+||++.|+|++.++.+|+
T Consensus 110 i~~~i~~~L~~lH~~~i~H~dl~~~nil 137 (287)
T cd06621 110 IAESVLKGLSYLHSRKIIHRDIKPSNIL 137 (287)
T ss_pred HHHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence 3467999999999999999999999876
No 367
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=75.27 E-value=1.3 Score=36.84 Aligned_cols=29 Identities=14% Similarity=0.071 Sum_probs=25.8
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||...|+|++.++.+|+
T Consensus 97 ~~~~qi~~~l~~lh~~~~~H~~l~p~ni~ 125 (250)
T cd05123 97 FYAAEIVLALEYLHSLGIIYRDLKPENIL 125 (250)
T ss_pred HHHHHHHHHHHHHHHCCceecCCCcceEE
Confidence 34568999999999999999999999986
No 368
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=75.27 E-value=1.5 Score=43.72 Aligned_cols=30 Identities=7% Similarity=0.045 Sum_probs=26.7
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhHh
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAITG 253 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~~ 253 (264)
..-..++..|.+||.+.|+|||+|+.|+|.
T Consensus 136 ~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~ 165 (418)
T KOG1167|consen 136 WYLRNLLKALAHLHKNGIVHRDIKPSNFLY 165 (418)
T ss_pred HHHHHHHHHhhhhhccCccccCCCcccccc
Confidence 445678899999999999999999999986
No 369
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=74.19 E-value=1.4 Score=44.46 Aligned_cols=42 Identities=17% Similarity=0.149 Sum_probs=35.4
Q ss_pred ccCCCCcchhHHHHHHhhhhccccccccCcchhhhH----hhhhcc
Q 024658 217 RDHGQSVSRSTAIISSLRGLQNQTMTDQGDAAAAIT----GICRLS 258 (264)
Q Consensus 217 ~~~~~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~----~ic~l~ 258 (264)
+.-++-.+.+.+|-++..||..+.+||||.|+.||| .+||.+
T Consensus 300 l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIs 345 (468)
T KOG0197|consen 300 LNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKIS 345 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEc
Confidence 445566788999999999999999999999999998 456544
No 370
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=73.95 E-value=1.4 Score=43.04 Aligned_cols=31 Identities=6% Similarity=-0.001 Sum_probs=27.3
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhHhh
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAITGI 254 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~~i 254 (264)
+--++|.+++.+||...|.|||.|+-|||-+
T Consensus 127 ~iMrqlfegVeylHa~~IVHRDLKpENILld 157 (411)
T KOG0599|consen 127 RIMRQLFEGVEYLHARNIVHRDLKPENILLD 157 (411)
T ss_pred HHHHHHHHHHHHHHHhhhhhcccChhheeec
Confidence 3457888999999999999999999999854
No 371
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=73.88 E-value=1.6 Score=38.10 Aligned_cols=29 Identities=17% Similarity=0.245 Sum_probs=25.3
Q ss_pred chhHHHHHHhhhhcc-ccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQN-QTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~-~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||+ ..|+|+|.++.+|+
T Consensus 118 ~i~~~i~~~l~~lH~~~~i~H~dl~p~nil 147 (296)
T cd06618 118 KMTVAIVKALHYLKEKHGVIHRDVKPSNIL 147 (296)
T ss_pred HHHHHHHHHHHHHHhhCCEecCCCcHHHEE
Confidence 455789999999996 58999999999986
No 372
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=73.82 E-value=1.6 Score=37.70 Aligned_cols=32 Identities=16% Similarity=0.160 Sum_probs=27.4
Q ss_pred CCcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 221 QSVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 221 ~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+...-..+|+.+|.+||+..|+|++.++.+|+
T Consensus 117 ~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~ 148 (286)
T cd06614 117 QIAYVCREVLQGLEYLHSQNVIHRDIKSDNIL 148 (286)
T ss_pred HHHHHHHHHHHHHHHHHhCCeeeCCCChhhEE
Confidence 34445678999999999999999999999985
No 373
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=73.68 E-value=1.7 Score=42.04 Aligned_cols=35 Identities=6% Similarity=0.056 Sum_probs=29.7
Q ss_pred CCCCcchhHHHHHHhhhhccccccccCcchhhhHh
Q 024658 219 HGQSVSRSTAIISSLRGLQNQTMTDQGDAAAAITG 253 (264)
Q Consensus 219 ~~~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~~ 253 (264)
.-.+..--++|++.+++||+..|.|||.|+-|||=
T Consensus 134 E~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~ 168 (382)
T KOG0032|consen 134 ERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLL 168 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeee
Confidence 33455667899999999999999999999999873
No 374
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=73.67 E-value=1.7 Score=43.38 Aligned_cols=28 Identities=14% Similarity=0.100 Sum_probs=25.9
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-.++|+-.++|||.+-|.|||.|.+|||
T Consensus 111 ~~~Q~~~av~ylH~~~iLHRDlK~~Nif 138 (426)
T KOG0589|consen 111 WFVQILLAVNYLHENRVLHRDLKCANIF 138 (426)
T ss_pred HHHHHHHHHHHHHhhhhhcccchhhhhh
Confidence 3469999999999999999999999997
No 375
>PF03153 TFIIA: Transcription factor IIA, alpha/beta subunit; InterPro: IPR004855 Transcription factor IIA (TFIIA) is one of several factors that form part of a transcription pre-initiation complex along with RNA polymerase II, the TATA-box-binding protein (TBP) and TBP-associated factors, on the TATA-box sequence upstream of the initiation start site. After initiation, some components of the pre-initiation complex (including TFIIA) remain attached and re-initiate a subsequent round of transcription. TFIIA binds to TBP to stabilise TBP binding to the TATA element. TFIIA also inhibits the cytokine HMGB1 (high mobility group 1 protein) binding to TBP [], and can dissociate HMGB1 already bound to TBP/TATA-box. Human and Drosophila TFIIA have three subunits: two large subunits, LN/alpha and LC/beta, derived from the same gene, and a small subunit, S/gamma. Yeast TFIIA has two subunits: a large TOA1 subunit that shows sequence similarity to the N-terminal of LN/alpha and the C-terminal of LC/beta, and a small subunit, TOA2 that is highly homologous with S/gamma. The conserved regions of the large and small subunits of TFIIA combine to form two domains: a four-helix bundle (helical domain) composed of two helices from each of the N-terminal regions of TOA1 and TOA2 in yeast; and a beta-barrel (beta-barrel domain) composed of beta-sheets from the C-terminal regions of TOA1 and TOA2 []. This entry represents the precursor that yields both the alpha and beta subunits of TFIIA. The TFIIA heterotrimer is an essential general transcription initiation factor for the expression of genes transcribed by RNA polymerase II []. ; GO: 0006367 transcription initiation from RNA polymerase II promoter, 0005672 transcription factor TFIIA complex; PDB: 1NVP_B 1YTF_B 1RM1_C 1NH2_B.
Probab=73.43 E-value=1.3 Score=41.95 Aligned_cols=7 Identities=43% Similarity=0.710 Sum_probs=2.5
Q ss_pred ccCCcee
Q 024658 130 DDENQVV 136 (264)
Q Consensus 130 ~~enqvV 136 (264)
+.+|.||
T Consensus 329 ~~~~~~~ 335 (375)
T PF03153_consen 329 DTDNVVL 335 (375)
T ss_dssp TTS-EEE
T ss_pred CcCCEEE
Confidence 4444443
No 376
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=72.89 E-value=1.9 Score=42.17 Aligned_cols=27 Identities=11% Similarity=0.132 Sum_probs=25.7
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+.+||-.|+|||+..|+-||.|+-|||
T Consensus 150 AAeivlAleylH~~~iiYRDLKPENiL 176 (355)
T KOG0616|consen 150 AAEIVLALEYLHSLDIIYRDLKPENLL 176 (355)
T ss_pred HHHHHHHHHHHHhcCeeeccCChHHee
Confidence 678999999999999999999999997
No 377
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=72.67 E-value=1.7 Score=43.89 Aligned_cols=29 Identities=14% Similarity=0.000 Sum_probs=24.5
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
........||.|||++.+||||+|+-|+|
T Consensus 266 ~~~~~AA~Gl~YLh~k~~IHRDIAARNcL 294 (474)
T KOG0194|consen 266 RFCYDAARGLEYLHSKNCIHRDIAARNCL 294 (474)
T ss_pred HHHHHHHhHHHHHHHCCCcchhHhHHHhe
Confidence 34456677999999999999999998876
No 378
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=72.56 E-value=1.8 Score=38.04 Aligned_cols=29 Identities=10% Similarity=0.117 Sum_probs=25.8
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||.+.|+|+|.++.||+
T Consensus 119 ~i~~~l~~al~~LH~~gi~H~dL~p~Nil 147 (293)
T cd06647 119 AVCRECLQALEFLHSNQVIHRDIKSDNIL 147 (293)
T ss_pred HHHHHHHHHHHHHHhCCEeeccCCHHHEE
Confidence 34568899999999999999999999986
No 379
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=72.45 E-value=1.9 Score=36.70 Aligned_cols=28 Identities=14% Similarity=0.185 Sum_probs=24.1
Q ss_pred hhHHHHHHhhhhcc-ccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQN-QTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~-~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||. +.|+|+|.++.|||
T Consensus 118 ~~~~l~~~l~~lh~~~~i~H~dl~~~nil 146 (269)
T cd08528 118 IFVQMVLALRYLHKEKRIVHRDLTPNNIM 146 (269)
T ss_pred HHHHHHHHHHHhccCCceeecCCCHHHEE
Confidence 34578999999995 67999999999986
No 380
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=71.80 E-value=1.7 Score=41.59 Aligned_cols=25 Identities=20% Similarity=0.259 Sum_probs=23.0
Q ss_pred HHHHHhhhhcccc--ccccCcchhhhH
Q 024658 228 AIISSLRGLQNQT--MTDQGDAAAAIT 252 (264)
Q Consensus 228 ~i~~sl~~l~~~~--i~~~d~~~a~i~ 252 (264)
.|.++|+.||... ..|+|+|+||||
T Consensus 135 gic~gL~~lH~~~~~yAH~DiKP~NIL 161 (302)
T KOG2345|consen 135 GICRGLEALHEKEPPYAHRDIKPANIL 161 (302)
T ss_pred HHHHHHHHHhccCCcccccCCCcceeE
Confidence 4678999999999 999999999997
No 381
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=71.72 E-value=1.2 Score=44.26 Aligned_cols=27 Identities=19% Similarity=0.154 Sum_probs=24.2
Q ss_pred HHHHHHhhhhccccccccCcchhhhHh
Q 024658 227 TAIISSLRGLQNQTMTDQGDAAAAITG 253 (264)
Q Consensus 227 t~i~~sl~~l~~~~i~~~d~~~a~i~~ 253 (264)
..|-..|.-||+|.|-|||.|+-|||-
T Consensus 183 kdia~aLdFlH~kgIAHRDlKPENiLC 209 (463)
T KOG0607|consen 183 KDIASALDFLHTKGIAHRDLKPENILC 209 (463)
T ss_pred HHHHHHHHHHhhcCcccccCCccceee
Confidence 456779999999999999999999973
No 382
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=71.32 E-value=2.3 Score=36.68 Aligned_cols=30 Identities=17% Similarity=0.156 Sum_probs=26.3
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||.+.|+|+|.++.||+
T Consensus 104 ~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~ 133 (277)
T cd06641 104 ATILREILKGLDYLHSEKKIHRDIKAANVL 133 (277)
T ss_pred HHHHHHHHHHHHHHccCCeecCCCCHHhEE
Confidence 345578899999999999999999999986
No 383
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=71.11 E-value=2.1 Score=46.94 Aligned_cols=28 Identities=11% Similarity=0.110 Sum_probs=24.7
Q ss_pred hhHHHHHHhhhhcc-------ccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQN-------QTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~-------~~i~~~d~~~a~i~ 252 (264)
...+|+.+|.+||+ +.|+|+|+++.|||
T Consensus 123 Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNIL 157 (1021)
T PTZ00266 123 ITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIF 157 (1021)
T ss_pred HHHHHHHHHHHHHhcccccccCCceeccCcHHHeE
Confidence 45789999999998 44999999999997
No 384
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=70.64 E-value=1.9 Score=42.36 Aligned_cols=29 Identities=7% Similarity=0.126 Sum_probs=25.7
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+-+-++.-++++||+..|+|||.|+.||+
T Consensus 122 ~i~yq~~~~ik~lhs~~IihRdLkPsniv 150 (369)
T KOG0665|consen 122 YILYQMLCGIKHLHSAGIIHRDLKPSNIV 150 (369)
T ss_pred HHHHHHHHHHHHHHhcceeecccCcccce
Confidence 34568888999999999999999999985
No 385
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=70.56 E-value=2.3 Score=34.36 Aligned_cols=30 Identities=17% Similarity=0.141 Sum_probs=26.4
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||+..|.|++..+.+|+
T Consensus 90 ~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~ 119 (244)
T smart00220 90 RFYARQILSALEYLHSNGIIHRDLKPENIL 119 (244)
T ss_pred HHHHHHHHHHHHHHHHcCeecCCcCHHHeE
Confidence 345678999999999999999999999986
No 386
>PLN02400 cellulose synthase
Probab=70.26 E-value=4.4 Score=44.83 Aligned_cols=30 Identities=17% Similarity=0.351 Sum_probs=23.7
Q ss_pred cccccccCCC----CceecccCCCCcccCchhhh
Q 024658 45 LCHVCQSLTP----WKASGPKLGPTVSVCDACVA 74 (264)
Q Consensus 45 LC~~C~~~p~----~ka~~~C~~d~~~LC~~Cd~ 74 (264)
+|+.|...-. --..+.|..|+-++|..|.-
T Consensus 38 iCqICGD~VG~t~dGe~FVAC~eCaFPVCRpCYE 71 (1085)
T PLN02400 38 ICQICGDDVGVTETGDVFVACNECAFPVCRPCYE 71 (1085)
T ss_pred eeeecccccCcCCCCCEEEEEccCCCccccchhh
Confidence 7889975322 22678999999999999986
No 387
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=69.56 E-value=2.3 Score=41.62 Aligned_cols=26 Identities=15% Similarity=0.109 Sum_probs=23.3
Q ss_pred HHHHHHhhhhcc----ccccccCcchhhhH
Q 024658 227 TAIISSLRGLQN----QTMTDQGDAAAAIT 252 (264)
Q Consensus 227 t~i~~sl~~l~~----~~i~~~d~~~a~i~ 252 (264)
+++...|.+.|+ +.|.|||+|+||||
T Consensus 131 ~QL~~AL~~cH~~~~r~~VmHRDIKPaNIF 160 (375)
T KOG0591|consen 131 VQLCRALYHCHSKIPRGTVMHRDIKPANIF 160 (375)
T ss_pred HHHHHHHHHHhccccccceeeccCcchheE
Confidence 688889999999 56999999999997
No 388
>PLN02189 cellulose synthase
Probab=69.07 E-value=5.2 Score=44.12 Aligned_cols=30 Identities=17% Similarity=0.321 Sum_probs=23.9
Q ss_pred cccccccC----CCCceecccCCCCcccCchhhh
Q 024658 45 LCHVCQSL----TPWKASGPKLGPTVSVCDACVA 74 (264)
Q Consensus 45 LC~~C~~~----p~~ka~~~C~~d~~~LC~~Cd~ 74 (264)
+|+.|... ..-...+.|..|+-++|..|.-
T Consensus 36 ~C~iCgd~vg~~~~g~~fvaC~~C~fpvCr~Cye 69 (1040)
T PLN02189 36 VCEICGDEIGLTVDGDLFVACNECGFPVCRPCYE 69 (1040)
T ss_pred cccccccccCcCCCCCEEEeeccCCCccccchhh
Confidence 78888754 2233778999999999999986
No 389
>PF04147 Nop14: Nop14-like family ; InterPro: IPR007276 Emg1 and Nop14 are novel proteins whose interaction is required for the maturation of the 18S rRNA and for 40S ribosome production [].
Probab=68.80 E-value=4 Score=43.59 Aligned_cols=7 Identities=29% Similarity=0.710 Sum_probs=3.0
Q ss_pred hhhhccc
Q 024658 167 SLKRMRD 173 (264)
Q Consensus 167 ~~kr~r~ 173 (264)
+++|+|.
T Consensus 446 iI~RIrk 452 (840)
T PF04147_consen 446 IIQRIRK 452 (840)
T ss_pred HHHHHHH
Confidence 4444443
No 390
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=67.07 E-value=2.8 Score=38.41 Aligned_cols=27 Identities=15% Similarity=0.220 Sum_probs=24.9
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-.+|...|..||...|+|+|.+++||+
T Consensus 141 ~~~i~~~l~~lH~~gi~H~Dikp~Nil 167 (232)
T PRK10359 141 KAKIKASIESLHQHGMVSGDPHKGNFI 167 (232)
T ss_pred HHHHHHHHHHHHHcCCccCCCChHHEE
Confidence 458999999999999999999999986
No 391
>PF03115 Astro_capsid: Astrovirus capsid protein precursor; InterPro: IPR004337 The astrovirus genome is apparently organised with nonstructural proteins encoded at the 5' end and structural proteins at the 3' end []. Proteins in this family are encoded by astrovirus ORF2, one of the three astrovirus ORFs (1a, 1b, 2). The proteins contain a viral RNA-dependent RNA polymerase motif []. The 87kDa precursor polyprotein undergoes an intracellular cleavage to form a 79kDa protein. Subsequently, extracellular trypsin cleavage yields the three proteins forming the infectious virion [].; PDB: 3QSQ_A 3TS3_D.
Probab=66.78 E-value=1.9 Score=46.19 Aligned_cols=6 Identities=50% Similarity=0.535 Sum_probs=0.0
Q ss_pred CceecC
Q 024658 133 NQVVPW 138 (264)
Q Consensus 133 nqvVp~ 138 (264)
||=+|-
T Consensus 719 NqGi~e 724 (787)
T PF03115_consen 719 NQGIPE 724 (787)
T ss_dssp ------
T ss_pred HcCCCH
Confidence 344433
No 392
>PHA02988 hypothetical protein; Provisional
Probab=66.04 E-value=3 Score=36.73 Aligned_cols=30 Identities=7% Similarity=0.021 Sum_probs=25.2
Q ss_pred cchhHHHHHHhhhhcc-ccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQN-QTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~-~~i~~~d~~~a~i~ 252 (264)
.....+|+.+|.+||+ ..|+|||.++++||
T Consensus 125 ~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nil 155 (283)
T PHA02988 125 LDMAIDCCKGLYNLYKYTNKPYKNLTSVSFL 155 (283)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCChhhEE
Confidence 3445688999999997 48899999999986
No 393
>KOG3540 consensus Beta amyloid precursor protein [General function prediction only]
Probab=65.94 E-value=5.1 Score=41.26 Aligned_cols=11 Identities=18% Similarity=0.691 Sum_probs=7.0
Q ss_pred ccccccCCCCc
Q 024658 46 CHVCQSLTPWK 56 (264)
Q Consensus 46 C~~C~~~p~~k 56 (264)
|+.|+.+..|+
T Consensus 143 mD~cEn~~hwh 153 (615)
T KOG3540|consen 143 MDQCENNQHWH 153 (615)
T ss_pred cccccchHHHH
Confidence 45677666655
No 394
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=63.92 E-value=3.4 Score=42.53 Aligned_cols=29 Identities=17% Similarity=0.174 Sum_probs=26.7
Q ss_pred chhHHHHHHhhhhccccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
=-+++|+=+|..||+.-|.-||.|++|||
T Consensus 291 FYAAEi~cGLehlH~~~iVYRDLKPeNIL 319 (591)
T KOG0986|consen 291 FYAAEIICGLEHLHRRRIVYRDLKPENIL 319 (591)
T ss_pred HHHHHHHhhHHHHHhcceeeccCChhhee
Confidence 34688999999999999999999999997
No 395
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=62.57 E-value=2 Score=44.04 Aligned_cols=26 Identities=12% Similarity=0.155 Sum_probs=25.1
Q ss_pred HHHHHHhhhhccccccccCcchhhhH
Q 024658 227 TAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 227 t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-||+.||+++|+-.+-|||.|+-|||
T Consensus 117 ~QilqGL~hiHk~GfFHRDlKPENiL 142 (538)
T KOG0661|consen 117 YQILQGLAHIHKHGFFHRDLKPENIL 142 (538)
T ss_pred HHHHHHHHHHHhcCcccccCChhheE
Confidence 79999999999999999999999996
No 396
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=62.11 E-value=4.3 Score=39.24 Aligned_cols=28 Identities=7% Similarity=0.063 Sum_probs=25.4
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-.+||+++|+|-|...|+|||-++-++|
T Consensus 115 ~~rQiLeal~yCH~n~IvHRDvkP~nll 142 (355)
T KOG0033|consen 115 CIQQILEALAYCHSNGIVHRDLKPENLL 142 (355)
T ss_pred HHHHHHHHHHHHHhcCceeccCChhhee
Confidence 3579999999999999999999998876
No 397
>PF04889 Cwf_Cwc_15: Cwf15/Cwc15 cell cycle control protein; InterPro: IPR006973 This family represents Cwf15/Cwc15 (from Schizosaccharomyces pombe and Saccharomyces cerevisiae respectively) and their homologues. The function of these proteins is unknown, but they form part of the spliceosome and are thus thought to be involved in mRNA splicing [].; GO: 0000398 nuclear mRNA splicing, via spliceosome, 0005681 spliceosomal complex
Probab=61.48 E-value=5.1 Score=37.11 Aligned_cols=11 Identities=45% Similarity=0.519 Sum_probs=4.6
Q ss_pred hhhhh-hccccC
Q 024658 165 DFSLK-RMRDFG 175 (264)
Q Consensus 165 ~~~~k-r~r~~~ 175 (264)
.|.+| |.|..+
T Consensus 197 ~~~~kr~W~ddv 208 (244)
T PF04889_consen 197 DFKVKRRWDDDV 208 (244)
T ss_pred CCccccCCcccc
Confidence 34444 334443
No 398
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=61.11 E-value=4.4 Score=35.03 Aligned_cols=29 Identities=17% Similarity=0.213 Sum_probs=24.8
Q ss_pred chhHHHHHHhhhhcc-ccccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQN-QTMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~-~~i~~~d~~~a~i~ 252 (264)
....+|+.+|.+||+ ..|+|++.++.+|+
T Consensus 107 ~~~~~i~~~l~~LH~~~~i~H~dl~p~nil 136 (284)
T cd06620 107 KIAVAVVEGLTYLYNVHRIMHRDIKPSNIL 136 (284)
T ss_pred HHHHHHHHHHHHHHHhcCeeccCCCHHHEE
Confidence 445678999999996 47999999999987
No 399
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=60.94 E-value=3.9 Score=40.06 Aligned_cols=27 Identities=19% Similarity=0.257 Sum_probs=23.0
Q ss_pred hHHHHHHhhhhccc-cccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQ-TMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~-~i~~~d~~~a~i~ 252 (264)
+-+||+.|-||-.| .|||||.|++|||
T Consensus 197 tva~v~AL~YLKeKH~viHRDvKPSNIL 224 (391)
T KOG0983|consen 197 TVAIVKALYYLKEKHGVIHRDVKPSNIL 224 (391)
T ss_pred HHHHHHHHHHHHHhcceeecccCccceE
Confidence 46899999998533 7999999999997
No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=60.81 E-value=4.9 Score=32.44 Aligned_cols=31 Identities=13% Similarity=0.074 Sum_probs=26.4
Q ss_pred CcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 222 SVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 222 ~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+...+|+.+|.+||++.|.|++.++.+|+
T Consensus 100 ~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~ 130 (225)
T smart00221 100 ARFYLRQILEALEYLHSLGIVHRDLKPENIL 130 (225)
T ss_pred HHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 3445578899999999999999999999875
No 401
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=59.95 E-value=4.3 Score=44.46 Aligned_cols=37 Identities=8% Similarity=-0.047 Sum_probs=32.8
Q ss_pred cccCCCCcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 216 DRDHGQSVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 216 v~~~~~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+-++.-....+++|+.-++.||...|||+|+|+-|.+
T Consensus 790 ~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfl 826 (974)
T KOG1166|consen 790 VMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFL 826 (974)
T ss_pred CCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeE
Confidence 3567778899999999999999999999999998753
No 402
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=59.70 E-value=3.3 Score=44.13 Aligned_cols=30 Identities=20% Similarity=0.304 Sum_probs=25.5
Q ss_pred HHHHHhhhhccccccccCcchhhhH----hhhhc
Q 024658 228 AIISSLRGLQNQTMTDQGDAAAAIT----GICRL 257 (264)
Q Consensus 228 ~i~~sl~~l~~~~i~~~d~~~a~i~----~ic~l 257 (264)
..+.+|.|||+-.+||||+|+.||| ||=||
T Consensus 134 gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKL 167 (948)
T KOG0577|consen 134 GALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKL 167 (948)
T ss_pred HHHHHHHHHHHhhHHhhhccccceEecCCCeeee
Confidence 3477999999999999999999998 55554
No 403
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=59.58 E-value=3.8 Score=44.37 Aligned_cols=31 Identities=19% Similarity=0.142 Sum_probs=27.0
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhHh
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAITG 253 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~~ 253 (264)
.+--.+|+++|.+||+-.|+|||.|+-|||=
T Consensus 609 ~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI 639 (903)
T KOG1027|consen 609 ISVLSQIASGLAHLHSLKIVHRDLKPQNILI 639 (903)
T ss_pred HHHHHHHHHHHHHHHhcccccccCCCceEEE
Confidence 3445789999999999999999999999973
No 404
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=59.16 E-value=5.2 Score=41.65 Aligned_cols=28 Identities=18% Similarity=0.139 Sum_probs=24.8
Q ss_pred hhHHHHHHhhhhc---cccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQ---NQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~---~~~i~~~d~~~a~i~ 252 (264)
-..+|+.+|.||| .+.|+|||.|+++|+
T Consensus 785 i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil 815 (968)
T PLN00113 785 IAIGIAKALRFLHCRCSPAVVVGNLSPEKII 815 (968)
T ss_pred HHHHHHHHHHHhccCCCCCeecCCCCHHhEE
Confidence 3467899999999 779999999999986
No 405
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=57.96 E-value=4.7 Score=42.86 Aligned_cols=36 Identities=19% Similarity=0.274 Sum_probs=28.1
Q ss_pred ccCCCCcchh----HHHHHHhhhhccccccccCcchhhhH
Q 024658 217 RDHGQSVSRS----TAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 217 ~~~~~~~s~~----t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-.-|.+++-- .+|+.+|++||.-.|+|||+|+-||+
T Consensus 113 N~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIv 152 (732)
T KOG4250|consen 113 NAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIV 152 (732)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEE
Confidence 4455555443 45667999999999999999999985
No 406
>PLN02436 cellulose synthase A
Probab=57.90 E-value=11 Score=41.94 Aligned_cols=30 Identities=17% Similarity=0.335 Sum_probs=23.7
Q ss_pred cccccccCCC----CceecccCCCCcccCchhhh
Q 024658 45 LCHVCQSLTP----WKASGPKLGPTVSVCDACVA 74 (264)
Q Consensus 45 LC~~C~~~p~----~ka~~~C~~d~~~LC~~Cd~ 74 (264)
+|+.|...-. --..+.|..|+-++|..|.-
T Consensus 38 iCqICGD~Vg~t~dGe~FVACn~C~fpvCr~Cye 71 (1094)
T PLN02436 38 TCQICGDEIELTVDGEPFVACNECAFPVCRPCYE 71 (1094)
T ss_pred cccccccccCcCCCCCEEEeeccCCCccccchhh
Confidence 7889975322 23678999999999999986
No 407
>KOG3130 consensus Uncharacterized conserved protein [Function unknown]
Probab=56.85 E-value=8.7 Score=38.89 Aligned_cols=7 Identities=43% Similarity=0.510 Sum_probs=4.1
Q ss_pred hhhhccc
Q 024658 167 SLKRMRD 173 (264)
Q Consensus 167 ~~kr~r~ 173 (264)
..||.|.
T Consensus 339 ~~~r~~~ 345 (514)
T KOG3130|consen 339 EAKRKRK 345 (514)
T ss_pred HHHHHHh
Confidence 4556665
No 408
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=56.26 E-value=3 Score=40.55 Aligned_cols=26 Identities=15% Similarity=0.201 Sum_probs=21.0
Q ss_pred HHHHHHhhhhcc-ccccccCcchhhhH
Q 024658 227 TAIISSLRGLQN-QTMTDQGDAAAAIT 252 (264)
Q Consensus 227 t~i~~sl~~l~~-~~i~~~d~~~a~i~ 252 (264)
-++|+.|+||-. -.|||||.|++|||
T Consensus 174 vatV~AL~yLK~~lkiIHRDvKPSNIL 200 (361)
T KOG1006|consen 174 VATVDALDYLKEELKIIHRDVKPSNIL 200 (361)
T ss_pred eeehhHHHHHHHHhhhhhccCChhheE
Confidence 367888888853 37999999999995
No 409
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=56.10 E-value=4.8 Score=42.59 Aligned_cols=32 Identities=6% Similarity=0.166 Sum_probs=26.0
Q ss_pred CCCcchhHHHHHHhhhhccccccccCcchhhh
Q 024658 220 GQSVSRSTAIISSLRGLQNQTMTDQGDAAAAI 251 (264)
Q Consensus 220 ~~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i 251 (264)
+++----.||+-+++.||.|.|+|||+|--|+
T Consensus 670 ~eAk~IFkQV~agi~hlh~~~ivhrdikdenv 701 (772)
T KOG1152|consen 670 PEAKLIFKQVVAGIKHLHDQGIVHRDIKDENV 701 (772)
T ss_pred HHHHHHHHHHHhccccccccCceecccccccE
Confidence 33444457899999999999999999998765
No 410
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=56.06 E-value=7.5 Score=39.17 Aligned_cols=22 Identities=36% Similarity=0.660 Sum_probs=15.0
Q ss_pred CCCCCCcchhhccccCCceecC
Q 024658 117 DDDEDPDEEEEEEDDENQVVPW 138 (264)
Q Consensus 117 dd~e~e~~~~~ee~~enqvVp~ 138 (264)
+||..+++.++||..|.|.+|.
T Consensus 295 ~Ded~e~e~ddEE~~e~~map~ 316 (542)
T KOG0699|consen 295 DDEDAEDEQDDEEMVEGSMAPL 316 (542)
T ss_pred cccccccccchhhhhhhccccc
Confidence 3334444566777788899998
No 411
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=55.12 E-value=6.8 Score=31.17 Aligned_cols=28 Identities=11% Similarity=0.114 Sum_probs=24.5
Q ss_pred hhHHHHHHhhhhccccc-----cccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTM-----TDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i-----~~~d~~~a~i~ 252 (264)
...+|+..|.+||+..+ +|+|.++.||+
T Consensus 88 ~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil 120 (170)
T cd05151 88 NLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFL 120 (170)
T ss_pred HHHHHHHHHHHHhCCCCCCceeecCCCCcCcEE
Confidence 34689999999999886 99999999986
No 412
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=54.91 E-value=6.3 Score=29.40 Aligned_cols=29 Identities=10% Similarity=0.069 Sum_probs=24.1
Q ss_pred chhHHHHHHhhhhccc---cccccCcchhhhH
Q 024658 224 SRSTAIISSLRGLQNQ---TMTDQGDAAAAIT 252 (264)
Q Consensus 224 s~~t~i~~sl~~l~~~---~i~~~d~~~a~i~ 252 (264)
....+|...|.+||.. .|+|+|.++.||+
T Consensus 90 ~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil 121 (155)
T cd05120 90 DIAEQLAELLAKLHQLPLLVLCHGDLHPGNIL 121 (155)
T ss_pred HHHHHHHHHHHHHhCCCceEEEecCCCcceEE
Confidence 4456788899999975 4999999999986
No 413
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=54.74 E-value=11 Score=39.47 Aligned_cols=51 Identities=18% Similarity=0.430 Sum_probs=30.2
Q ss_pred CCCCCCCCCCceEEecCCCcccccccCcccccccccCCcccccccccccccCCCCceecccCCCCccc
Q 024658 1 MRKCELCECPARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGPKLGPTVSV 68 (264)
Q Consensus 1 m~~Cd~C~~pA~vyC~aD~A~LC~~CDa~VHsAN~La~rH~RvpLC~~C~~~p~~ka~~~C~~d~~~L 68 (264)
|..|-.|+.. -.+.|++|..|.+++- | ..|..|...-+ ...-||..|+..+
T Consensus 1 M~~Cp~Cg~~-----n~~~akFC~~CG~~l~--------~---~~Cp~CG~~~~-~~~~fC~~CG~~~ 51 (645)
T PRK14559 1 MLICPQCQFE-----NPNNNRFCQKCGTSLT--------H---KPCPQCGTEVP-VDEAHCPNCGAET 51 (645)
T ss_pred CCcCCCCCCc-----CCCCCccccccCCCCC--------C---CcCCCCCCCCC-cccccccccCCcc
Confidence 8999999982 1245666777765542 1 24777765321 1445666666554
No 414
>KOG3130 consensus Uncharacterized conserved protein [Function unknown]
Probab=53.93 E-value=7.3 Score=39.40 Aligned_cols=6 Identities=17% Similarity=0.507 Sum_probs=2.4
Q ss_pred CceecC
Q 024658 133 NQVVPW 138 (264)
Q Consensus 133 nqvVp~ 138 (264)
+-.+|-
T Consensus 304 dN~~p~ 309 (514)
T KOG3130|consen 304 DNSIPT 309 (514)
T ss_pred CCcCcc
Confidence 333443
No 415
>PF03153 TFIIA: Transcription factor IIA, alpha/beta subunit; InterPro: IPR004855 Transcription factor IIA (TFIIA) is one of several factors that form part of a transcription pre-initiation complex along with RNA polymerase II, the TATA-box-binding protein (TBP) and TBP-associated factors, on the TATA-box sequence upstream of the initiation start site. After initiation, some components of the pre-initiation complex (including TFIIA) remain attached and re-initiate a subsequent round of transcription. TFIIA binds to TBP to stabilise TBP binding to the TATA element. TFIIA also inhibits the cytokine HMGB1 (high mobility group 1 protein) binding to TBP [], and can dissociate HMGB1 already bound to TBP/TATA-box. Human and Drosophila TFIIA have three subunits: two large subunits, LN/alpha and LC/beta, derived from the same gene, and a small subunit, S/gamma. Yeast TFIIA has two subunits: a large TOA1 subunit that shows sequence similarity to the N-terminal of LN/alpha and the C-terminal of LC/beta, and a small subunit, TOA2 that is highly homologous with S/gamma. The conserved regions of the large and small subunits of TFIIA combine to form two domains: a four-helix bundle (helical domain) composed of two helices from each of the N-terminal regions of TOA1 and TOA2 in yeast; and a beta-barrel (beta-barrel domain) composed of beta-sheets from the C-terminal regions of TOA1 and TOA2 []. This entry represents the precursor that yields both the alpha and beta subunits of TFIIA. The TFIIA heterotrimer is an essential general transcription initiation factor for the expression of genes transcribed by RNA polymerase II []. ; GO: 0006367 transcription initiation from RNA polymerase II promoter, 0005672 transcription factor TFIIA complex; PDB: 1NVP_B 1YTF_B 1RM1_C 1NH2_B.
Probab=52.76 E-value=4.6 Score=38.35 Aligned_cols=7 Identities=14% Similarity=0.045 Sum_probs=0.0
Q ss_pred ccCCCCC
Q 024658 96 RISGHDE 102 (264)
Q Consensus 96 ~~~~~d~ 102 (264)
.+|.+|+
T Consensus 273 ~DG~~d~ 279 (375)
T PF03153_consen 273 LDGAGDD 279 (375)
T ss_dssp -------
T ss_pred ccCCCCC
Confidence 4444444
No 416
>KOG1999 consensus RNA polymerase II transcription elongation factor DSIF/SUPT5H/SPT5 [Transcription]
Probab=51.94 E-value=11 Score=41.56 Aligned_cols=12 Identities=33% Similarity=0.653 Sum_probs=7.5
Q ss_pred CCCCCCCCCCcc
Q 024658 205 LKQPRPTISDCD 216 (264)
Q Consensus 205 lk~~~i~~~~~v 216 (264)
.|+|+|=+=++.
T Consensus 162 vkDP~LW~VKC~ 173 (1024)
T KOG1999|consen 162 VKDPNLWIVKCK 173 (1024)
T ss_pred CCCCCeeEEEec
Confidence 577777555554
No 417
>PTZ00007 (NAP-L) nucleosome assembly protein -L; Provisional
Probab=49.99 E-value=14 Score=35.98 Aligned_cols=13 Identities=8% Similarity=-0.189 Sum_probs=8.0
Q ss_pred cccccCCCCcccc
Q 024658 85 KAVVRGGSQSERI 97 (264)
Q Consensus 85 pV~~~~g~p~~~~ 97 (264)
+|.=|+|-....+
T Consensus 271 AV~yftGea~d~~ 283 (337)
T PTZ00007 271 AVYWFLGEAIDED 283 (337)
T ss_pred cHHhhCCCccccc
Confidence 4556888766533
No 418
>KOG2140 consensus Uncharacterized conserved protein [General function prediction only]
Probab=48.83 E-value=12 Score=39.20 Aligned_cols=26 Identities=35% Similarity=0.656 Sum_probs=14.3
Q ss_pred CCCCCCCCcchhhccccCCceecCCC
Q 024658 115 DDDDDEDPDEEEEEEDDENQVVPWSG 140 (264)
Q Consensus 115 ~~dd~e~e~~~~~ee~~enqvVp~s~ 140 (264)
+++++|+|++..||+++.-|+.....
T Consensus 423 ~E~~~eee~e~~ee~~e~~qI~D~T~ 448 (739)
T KOG2140|consen 423 SEDDDEEEDESVEEDEEKLQIIDMTE 448 (739)
T ss_pred ccccccccccccccccccceeecccc
Confidence 44444445444455555777776654
No 419
>KOG3241 consensus Uncharacterized conserved protein [Function unknown]
Probab=48.05 E-value=14 Score=33.81 Aligned_cols=10 Identities=30% Similarity=1.179 Sum_probs=3.9
Q ss_pred ccccccCCCC
Q 024658 46 CHVCQSLTPW 55 (264)
Q Consensus 46 C~~C~~~p~~ 55 (264)
|+.|.....|
T Consensus 45 CqRCkEqieW 54 (227)
T KOG3241|consen 45 CQRCKEQIEW 54 (227)
T ss_pred HHHHHHHHHH
Confidence 4444333333
No 420
>PF04546 Sigma70_ner: Sigma-70, non-essential region; InterPro: IPR007631 The bacterial core RNA polymerase complex, which consists of five subunits, is sufficient for transcription elongation and termination but is unable to initiate transcription. Transcription initiation from promoter elements requires a sixth, dissociable subunit called a sigma factor, which reversibly associates with the core RNA polymerase complex to form a holoenzyme []. RNA polymerase recruits alternative sigma factors as a means of switching on specific regulons. Most bacteria express a multiplicity of sigma factors. Two of these factors, sigma-70 (gene rpoD), generally known as the major or primary sigma factor, and sigma-54 (gene rpoN or ntrA) direct the transcription of a wide variety of genes. The other sigma factors, known as alternative sigma factors, are required for the transcription of specific subsets of genes. With regard to sequence similarity, sigma factors can be grouped into two classes, the sigma-54 and sigma-70 families. Sequence alignments of the sigma70 family members reveal four conserved regions that can be further divided into subregions eg. sub-region 2.2, which may be involved in the binding of the sigma factor to the core RNA polymerase; and sub-region 4.2, which seems to harbor a DNA-binding 'helix-turn-helix' motif involved in binding the conserved -35 region of promoters recognised by the major sigma factors [, ]. This domain is found in the primary vegetative sigma factor. Its function is unclear, and it can be removed without apparent loss of function [, ].; GO: 0003677 DNA binding, 0003700 sequence-specific DNA binding transcription factor activity, 0016987 sigma factor activity, 0006352 transcription initiation, DNA-dependent, 0006355 regulation of transcription, DNA-dependent; PDB: 1SIG_A 3IYD_F.
Probab=47.31 E-value=10 Score=33.47 Aligned_cols=7 Identities=29% Similarity=0.738 Sum_probs=3.6
Q ss_pred hhhHhhh
Q 024658 249 AAITGIC 255 (264)
Q Consensus 249 a~i~~ic 255 (264)
-.|+-||
T Consensus 148 r~i~~l~ 154 (211)
T PF04546_consen 148 RRIMRLC 154 (211)
T ss_dssp HHHHHCC
T ss_pred HHHHHHH
Confidence 3455555
No 421
>PF12773 DZR: Double zinc ribbon
Probab=46.77 E-value=23 Score=24.18 Aligned_cols=40 Identities=15% Similarity=0.208 Sum_probs=22.7
Q ss_pred CCcccccccCcccccccccCCcccccccccccccCCCCceecccCCC
Q 024658 18 DQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGPKLGP 64 (264)
Q Consensus 18 D~A~LC~~CDa~VHsAN~La~rH~RvpLC~~C~~~p~~ka~~~C~~d 64 (264)
+.+.+|..|...+- .......+|..|...- .....||..|
T Consensus 10 ~~~~fC~~CG~~l~------~~~~~~~~C~~Cg~~~-~~~~~fC~~C 49 (50)
T PF12773_consen 10 DDAKFCPHCGTPLP------PPDQSKKICPNCGAEN-PPNAKFCPNC 49 (50)
T ss_pred ccccCChhhcCChh------hccCCCCCCcCCcCCC-cCCcCccCcc
Confidence 45777777776665 2344456677776532 2244555544
No 422
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=45.93 E-value=9.3 Score=37.45 Aligned_cols=27 Identities=11% Similarity=0.207 Sum_probs=24.7
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+.|+...|.++|+|.|.|||.|.-|||
T Consensus 127 ~~ql~SAi~fMHsknlVHRdlK~eNiL 153 (378)
T KOG1345|consen 127 FAQLLSAIEFMHSKNLVHRDLKAENIL 153 (378)
T ss_pred HHHHHHHHHHhhccchhhcccccceEE
Confidence 467888999999999999999999997
No 423
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=45.58 E-value=11 Score=39.06 Aligned_cols=27 Identities=0% Similarity=0.053 Sum_probs=24.8
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.+++|-.|+-||.-.|||||+||.|+|
T Consensus 247 iaE~vlAI~~iH~~gyIHRDIKPdNlL 273 (550)
T KOG0605|consen 247 IAETVLAIESIHQLGYIHRDIKPDNLL 273 (550)
T ss_pred HHHHHHHHHHHHHcCcccccCChhhee
Confidence 477888999999999999999999986
No 424
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=45.53 E-value=11 Score=40.07 Aligned_cols=26 Identities=19% Similarity=0.207 Sum_probs=22.3
Q ss_pred HHHHHHhhhhccccccccCcchhhhH
Q 024658 227 TAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 227 t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
|||+-.|+|||-|.|.|=|.|+-|||
T Consensus 671 tQIL~ALr~LH~knIvHCDLKPENVL 696 (888)
T KOG4236|consen 671 TQILVALRYLHFKNIVHCDLKPENVL 696 (888)
T ss_pred HHHHHHHHHhhhcceeeccCCchhee
Confidence 67888888888888888888888886
No 425
>KOG3540 consensus Beta amyloid precursor protein [General function prediction only]
Probab=44.73 E-value=16 Score=37.80 Aligned_cols=11 Identities=9% Similarity=-0.342 Sum_probs=5.7
Q ss_pred CccccccCCCC
Q 024658 83 DDKAVVRGGSQ 93 (264)
Q Consensus 83 r~pV~~~~g~p 93 (264)
++.=+-|--||
T Consensus 180 ~F~GvEfVCCP 190 (615)
T KOG3540|consen 180 MFRGVEFVCCP 190 (615)
T ss_pred cccCceEEeCC
Confidence 33334456677
No 426
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=44.02 E-value=12 Score=39.07 Aligned_cols=27 Identities=15% Similarity=0.161 Sum_probs=25.0
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-.+|+.++.|||.|.|.|||.|.-|||
T Consensus 161 F~q~vsaveYcH~k~ivHrdLk~eNil 187 (596)
T KOG0586|consen 161 FRQIVSAVEYCHSKNIVHRDLKAENIL 187 (596)
T ss_pred hHHHHHHHHHHhhcceeccccchhhcc
Confidence 368999999999999999999999986
No 427
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=43.73 E-value=11 Score=36.47 Aligned_cols=26 Identities=4% Similarity=0.086 Sum_probs=24.1
Q ss_pred HHHHHHhhhhccccccccCcchhhhH
Q 024658 227 TAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 227 t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.|||.-|+++|.+-.||||+|+-|.|
T Consensus 118 DQml~RiEyvH~r~fiHRDIKPdNFL 143 (341)
T KOG1163|consen 118 DQMLSRIEYVHLRNFIHRDIKPDNFL 143 (341)
T ss_pred HHHHHHHHHHHhhccccccCCcccee
Confidence 47899999999999999999999875
No 428
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=43.24 E-value=12 Score=32.29 Aligned_cols=30 Identities=10% Similarity=0.031 Sum_probs=25.6
Q ss_pred cchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 223 VSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 223 ~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..--.+|..-+.+||.+.|.|+|....|||
T Consensus 121 ~~ll~~l~~~i~~lH~~gi~H~Dl~~~NIL 150 (206)
T PF06293_consen 121 RELLRALARLIAKLHDAGIYHGDLNPSNIL 150 (206)
T ss_pred HHHHHHHHHHHHHHHHCcCCCCCCCcccEE
Confidence 344567777899999999999999999997
No 429
>PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A.
Probab=42.57 E-value=23 Score=28.31 Aligned_cols=36 Identities=19% Similarity=0.357 Sum_probs=14.3
Q ss_pred cccccccccccccCCC----CceecccCCCCcccCchhhh
Q 024658 39 KHLRCLLCHVCQSLTP----WKASGPKLGPTVSVCDACVA 74 (264)
Q Consensus 39 rH~RvpLC~~C~~~p~----~ka~~~C~~d~~~LC~~Cd~ 74 (264)
++.-..+|+.|...-. -...+.|..|+.++|..|.-
T Consensus 5 k~~~~qiCqiCGD~VGl~~~Ge~FVAC~eC~fPvCr~CyE 44 (80)
T PF14569_consen 5 KNLNGQICQICGDDVGLTENGEVFVACHECAFPVCRPCYE 44 (80)
T ss_dssp S--SS-B-SSS--B--B-SSSSB--S-SSS-----HHHHH
T ss_pred hhcCCcccccccCccccCCCCCEEEEEcccCCccchhHHH
Confidence 3444567888864322 33778899999999999976
No 430
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=41.45 E-value=13 Score=37.97 Aligned_cols=32 Identities=16% Similarity=0.090 Sum_probs=29.1
Q ss_pred CCcchhHHHHHHhhhhccccccccCcchhhhH
Q 024658 221 QSVSRSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 221 ~~~s~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-.|+.-||..++.+|.++.++|||.|+=|||
T Consensus 419 dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVL 450 (609)
T KOG0200|consen 419 DLLSFAYQIANGMEYLASVPCVHRDLAARNVL 450 (609)
T ss_pred HHHHHHHHHHHHHHHHhhCCccchhhhhhhEE
Confidence 34578899999999999999999999999997
No 431
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=41.02 E-value=13 Score=38.74 Aligned_cols=27 Identities=7% Similarity=0.164 Sum_probs=24.1
Q ss_pred hHHHHHHhhhhccc-cccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQ-TMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~-~i~~~d~~~a~i~ 252 (264)
..+|+.+|.|||.+ .|||-|+|+-|||
T Consensus 193 ~~qvL~GLdYLH~ecgIIHTDlKPENvL 220 (590)
T KOG1290|consen 193 CRQVLTGLDYLHRECGIIHTDLKPENVL 220 (590)
T ss_pred HHHHHHHHHHHHHhcCccccCCCcceee
Confidence 46788899999976 7999999999987
No 432
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=40.56 E-value=15 Score=32.73 Aligned_cols=27 Identities=7% Similarity=0.133 Sum_probs=24.3
Q ss_pred hHHHHHHhhhh-ccccccccCcchhhhH
Q 024658 226 STAIISSLRGL-QNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l-~~~~i~~~d~~~a~i~ 252 (264)
-.+|+..|.+| |+..|+|+|....||+
T Consensus 130 ~~~i~~~l~~l~H~~glVHGDLs~~NIL 157 (197)
T cd05146 130 YYQVLSMMKQLYKECNLVHADLSEYNML 157 (197)
T ss_pred HHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 46888999888 8999999999999987
No 433
>KOG1991 consensus Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=39.77 E-value=18 Score=39.86 Aligned_cols=43 Identities=35% Similarity=0.354 Sum_probs=0.0
Q ss_pred ccCCCCccccCCCCCCCCCCCCC------------------CCCCCCCCCCCCcchhhccc
Q 024658 88 VRGGSQSERISGHDETDDDDDYE------------------DEDDDDDDDEDPDEEEEEED 130 (264)
Q Consensus 88 ~~~g~p~~~~~~~d~~~~dd~~~------------------ded~~~dd~e~e~~~~~ee~ 130 (264)
.+.+-...-+.+.++++|+++.+ |+|||+|++|.+.++++...
T Consensus 892 ~~~~~~~~~e~~~~d~dD~d~~d~d~~~~~~~~~~~~~~~~~~ddd~d~~~~~~~ed~~f~ 952 (1010)
T KOG1991|consen 892 GEEEDDDEEEDFIDDEDDIDEDDQDYLDEYGELALEKEDSLDDDDDFDEDELDLEEDELFE 952 (1010)
T ss_pred ccCCCCcchhhccCccccccccchhHHHhhccccccccccccccccccchhcccccccccc
No 434
>PTZ00429 beta-adaptin; Provisional
Probab=39.17 E-value=21 Score=38.07 Aligned_cols=17 Identities=18% Similarity=0.038 Sum_probs=9.6
Q ss_pred hhccccCCceecCCCCC
Q 024658 126 EEEEDDENQVVPWSGDD 142 (264)
Q Consensus 126 ~~ee~~enqvVp~s~~~ 142 (264)
+|+||.++++-|-+-|+
T Consensus 613 ~~~~~~~~~~~~~~~~~ 629 (746)
T PTZ00429 613 TEDDDAVELPSTPSMGT 629 (746)
T ss_pred ccchhhccCCCCCCCCC
Confidence 34455566666665544
No 435
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=38.47 E-value=12 Score=38.08 Aligned_cols=27 Identities=11% Similarity=0.087 Sum_probs=25.0
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..+|+=.|+|||...|+-||.|+-|||
T Consensus 185 aAEvl~ALEYLHmlGivYRDLKPENIL 211 (459)
T KOG0610|consen 185 AAEVLLALEYLHMLGIVYRDLKPENIL 211 (459)
T ss_pred HHHHHHHHHHHHhhceeeccCCcceeE
Confidence 467888999999999999999999997
No 436
>KOG3241 consensus Uncharacterized conserved protein [Function unknown]
Probab=38.42 E-value=23 Score=32.52 Aligned_cols=8 Identities=25% Similarity=0.766 Sum_probs=3.7
Q ss_pred cccccccC
Q 024658 20 ASLCWDCD 27 (264)
Q Consensus 20 A~LC~~CD 27 (264)
+..|+.|-
T Consensus 93 ~~vCAKC~ 100 (227)
T KOG3241|consen 93 QKVCAKCC 100 (227)
T ss_pred HHHHHHHh
Confidence 34444444
No 437
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=38.08 E-value=9 Score=38.15 Aligned_cols=30 Identities=23% Similarity=0.336 Sum_probs=25.3
Q ss_pred HHHHhhhhccccccccCcchhhhH----hhhhcc
Q 024658 229 IISSLRGLQNQTMTDQGDAAAAIT----GICRLS 258 (264)
Q Consensus 229 i~~sl~~l~~~~i~~~d~~~a~i~----~ic~l~ 258 (264)
-+++|.|||--.-||||+|+.||| ||-||.
T Consensus 138 TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLA 171 (502)
T KOG0574|consen 138 TLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLA 171 (502)
T ss_pred HHhHHHHHHHHHHHHhhcccccEEEcccchhhhh
Confidence 356889999888899999999998 777764
No 438
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=37.96 E-value=9.5 Score=39.67 Aligned_cols=35 Identities=14% Similarity=0.125 Sum_probs=27.8
Q ss_pred cCCCCcchhHHHHHHhhhhccc--cccccCcchhhhH
Q 024658 218 DHGQSVSRSTAIISSLRGLQNQ--TMTDQGDAAAAIT 252 (264)
Q Consensus 218 ~~~~~~s~~t~i~~sl~~l~~~--~i~~~d~~~a~i~ 252 (264)
+.-++-|-.-+||+.|+||-.. -|||-|.|++|||
T Consensus 566 SEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNIL 602 (775)
T KOG1151|consen 566 SEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNIL 602 (775)
T ss_pred hHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEE
Confidence 3344555567899999999855 5999999999997
No 439
>KOG1980 consensus Uncharacterized conserved protein [Function unknown]
Probab=36.12 E-value=17 Score=38.67 Aligned_cols=20 Identities=10% Similarity=-0.158 Sum_probs=14.8
Q ss_pred CCCCCccccccCCCCccccCC
Q 024658 79 GVNDDDKAVVRGGSQSERISG 99 (264)
Q Consensus 79 ~~H~r~pV~~~~g~p~~~~~~ 99 (264)
.+-+||| .+|+.-+.+-.-|
T Consensus 360 ~~~~~VP-Kg~S~yqa~wi~d 379 (754)
T KOG1980|consen 360 KRPKRVP-KGTSDYQAAWILD 379 (754)
T ss_pred ccccccC-CCccccceeeecC
Confidence 5677888 8888888776654
No 440
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=35.83 E-value=20 Score=34.53 Aligned_cols=28 Identities=4% Similarity=0.024 Sum_probs=25.1
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-+.+|+..|-+-|+..|.|||.|+-|+.
T Consensus 137 Y~~elLkALdyCHS~GImHRDVKPhNvm 164 (338)
T KOG0668|consen 137 YIYELLKALDYCHSMGIMHRDVKPHNVM 164 (338)
T ss_pred HHHHHHHHHhHHHhcCcccccCCcceee
Confidence 4689999999999999999999998763
No 441
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=35.60 E-value=17 Score=38.65 Aligned_cols=27 Identities=15% Similarity=0.190 Sum_probs=24.9
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.-++|..|-|||+-.|.|+|.|+-+||
T Consensus 106 a~~LVsaL~yLhs~rilhrd~kPqniL 132 (808)
T KOG0597|consen 106 AYDLVSALYYLHSNRILHRDMKPQNIL 132 (808)
T ss_pred HHHHHHHHHHHHhcCcccccCCcceee
Confidence 457899999999999999999999997
No 442
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=34.70 E-value=31 Score=36.14 Aligned_cols=7 Identities=29% Similarity=0.515 Sum_probs=4.3
Q ss_pred ceecCCC
Q 024658 134 QVVPWSG 140 (264)
Q Consensus 134 qvVp~s~ 140 (264)
-.||.+-
T Consensus 153 ~~IP~sh 159 (641)
T KOG0772|consen 153 KLIPGSH 159 (641)
T ss_pred hcCCccc
Confidence 4578763
No 443
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=34.63 E-value=17 Score=39.93 Aligned_cols=26 Identities=15% Similarity=0.248 Sum_probs=23.8
Q ss_pred HHHHHHhhhhccccccccCcchhhhH
Q 024658 227 TAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 227 t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..|+-+|.+|||-.+||||+|+-|||
T Consensus 130 re~lrgl~HLH~nkviHRDikG~NiL 155 (953)
T KOG0587|consen 130 REILRGLAHLHNNKVIHRDIKGQNVL 155 (953)
T ss_pred HHHHHHHHHHhhcceeeecccCceEE
Confidence 56777999999999999999999997
No 444
>PF03660 PHF5: PHF5-like protein; InterPro: IPR005345 Phf5 is a member of a novel murine multigene family that is highly conserved during evolution and belongs to the superfamily of PHD-finger proteins. At least one example, from Mus musculus (Mouse), may act as a chromatin-associated protein []. The Schizosaccharomyces pombe (Fission yeast) ini1 gene is essential, required for splicing []. It is localised in the nucleus, but not detected in the nucleolus and can be complemented by human ini1 []. The proteins of this family contain five CXXC motifs.; PDB: 2K0A_A.
Probab=34.57 E-value=17 Score=30.28 Aligned_cols=52 Identities=23% Similarity=0.392 Sum_probs=25.4
Q ss_pred cccccccCcccccccccCCcccccccccccccCCCCceecccCCCC-------cccCchhhh
Q 024658 20 ASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGPKLGPT-------VSVCDACVA 74 (264)
Q Consensus 20 A~LC~~CDa~VHsAN~La~rH~RvpLC~~C~~~p~~ka~~~C~~d~-------~~LC~~Cd~ 74 (264)
..||..||-+--.-...++-...|.+|+-|.... ....|..|. +..|..|..
T Consensus 20 G~lC~kCdGkCpiCDS~Vrp~~~VrICdeCs~G~---~~~rCIiCg~~~g~sdAYYC~eC~~ 78 (106)
T PF03660_consen 20 GRLCEKCDGKCPICDSYVRPCTKVRICDECSFGS---LQGRCIICGSGPGVSDAYYCWECVR 78 (106)
T ss_dssp -EE-GGGTT--TTT-------EE-EEEHHHHTSS---TTSB-TTTSSSB--EE-EE-HHHHH
T ss_pred hhhhhhcCCcccccCCccCCcceEEECCcCCCCC---cCceEEEecCCCCcccceehhhhHh
Confidence 3455555554443334444567788999888776 556666666 678888866
No 445
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=34.18 E-value=21 Score=32.92 Aligned_cols=26 Identities=4% Similarity=0.119 Sum_probs=23.5
Q ss_pred HHHHHHhhhhccccccccCcchhhhH
Q 024658 227 TAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 227 t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.+|...+.+||...|+|+|....|||
T Consensus 145 ~~la~~i~~LH~~Gi~HgDL~~~NiL 170 (268)
T PRK15123 145 KRVATMVRDMHAAGINHRDCYICHFL 170 (268)
T ss_pred HHHHHHHHHHHHCcCccCCCChhhEE
Confidence 46777899999999999999999996
No 446
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=34.07 E-value=17 Score=37.32 Aligned_cols=26 Identities=8% Similarity=0.215 Sum_probs=23.9
Q ss_pred HHHHHHhhhhccccccccCcchhhhH
Q 024658 227 TAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 227 t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.|+++...+||++.|-|||.|+-|||
T Consensus 348 aQlLEav~hL~~hgvAhRDlKSDNiL 373 (598)
T KOG4158|consen 348 AQLLEAVTHLHKHGVAHRDLKSDNIL 373 (598)
T ss_pred HHHHHHHHHHHHccchhhcccccceE
Confidence 46788999999999999999999997
No 447
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=33.54 E-value=20 Score=35.97 Aligned_cols=27 Identities=15% Similarity=0.154 Sum_probs=25.3
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..||+.+++.||.-.|||-|.|+-|||
T Consensus 198 ~~QL~~sv~fLh~~kl~HTDLKPENIL 224 (415)
T KOG0671|consen 198 GYQLLESVAFLHDLKLTHTDLKPENIL 224 (415)
T ss_pred HHHHHHHHHHHHhcceeecCCChheEE
Confidence 468999999999999999999999997
No 448
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=32.93 E-value=22 Score=33.68 Aligned_cols=28 Identities=7% Similarity=0.074 Sum_probs=23.8
Q ss_pred hhHHHHHHhhhhccccccccCcchhhhH
Q 024658 225 RSTAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 225 ~~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
-|-++|.-..+||++.|.|+|+++.++|
T Consensus 150 lT~Q~I~lvA~Lh~~GlVHgdi~~~nfl 177 (288)
T PF14531_consen 150 LTVQMIRLVANLHSYGLVHGDIKPENFL 177 (288)
T ss_dssp HHHHHHHHHHHHHHTTEEEST-SGGGEE
T ss_pred HHHHHHHHHHHHhhcceEecccceeeEE
Confidence 3557788889999999999999999987
No 449
>KOG2038 consensus CAATT-binding transcription factor/60S ribosomal subunit biogenesis protein [Translation, ribosomal structure and biogenesis; Transcription]
Probab=32.79 E-value=24 Score=38.53 Aligned_cols=11 Identities=36% Similarity=1.002 Sum_probs=4.7
Q ss_pred EEecCCCcccc
Q 024658 13 MYCESDQASLC 23 (264)
Q Consensus 13 vyC~aD~A~LC 23 (264)
+||-|+.+.|+
T Consensus 697 ~f~nAd~tslW 707 (988)
T KOG2038|consen 697 LFCNADHTSLW 707 (988)
T ss_pred cccCCccchHH
Confidence 44444444433
No 450
>PF05764 YL1: YL1 nuclear protein; InterPro: IPR008895 The proteins in this family are designated YL1 []. They have been shown to be DNA-binding and may be transcription factors [].; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=32.59 E-value=42 Score=30.71 Aligned_cols=6 Identities=33% Similarity=0.628 Sum_probs=2.5
Q ss_pred hhHHHH
Q 024658 225 RSTAII 230 (264)
Q Consensus 225 ~~t~i~ 230 (264)
|++.|.
T Consensus 145 R~st~~ 150 (240)
T PF05764_consen 145 RSSTVA 150 (240)
T ss_pred HHHHHH
Confidence 444443
No 451
>KOG0262 consensus RNA polymerase I, large subunit [Transcription]
Probab=32.57 E-value=45 Score=38.27 Aligned_cols=104 Identities=27% Similarity=0.384 Sum_probs=0.0
Q ss_pred CCCCccccccCCCCccccCCCCCCCCCC----------------CCCCCCCCCCCCCCCcchhhccccCCceecCCCCCC
Q 024658 80 VNDDDKAVVRGGSQSERISGHDETDDDD----------------DYEDEDDDDDDDEDPDEEEEEEDDENQVVPWSGDDS 143 (264)
Q Consensus 80 ~H~r~pV~~~~g~p~~~~~~~d~~~~dd----------------~~~ded~~~dd~e~e~~~~~ee~~enqvVp~s~~~~ 143 (264)
...+-+.....|.+.......-++++|| +|+++|+++-.++.++++++++|..|+.---..++.
T Consensus 1320 ~~~~~~~~~~~~~~~~~~~~e~~~~~ddddas~~k~~~k~~~~~dYe~~de~e~~~~~~~e~~~~~e~~e~d~e~g~dg~ 1399 (1640)
T KOG0262|consen 1320 GNEVDNNDEVGGEDNEDSDDESEDDEDDDDASDAKLHKKTEEEADYESEDEDERVEEREDEGDEDEESDEDDEEVGLDGT 1399 (1640)
T ss_pred cccCCccccccCCccccccccccccCcccchhHHHHhhhhccccCcCCCchhhhhhhhhcccccccccccchhhcccCCC
Q ss_pred CCCCCCCCCCCCCCCCccccchhhhhhccc-cCCCCCccccC
Q 024658 144 QSPPQPPPPPVSSSCSSISEEDFSLKRMRD-FGDLFSDDEIG 184 (264)
Q Consensus 144 ~~~~~~~pp~~ssss~~~~~~~~~~kr~r~-~~~~~s~~~~~ 184 (264)
.+|...+.+..---...+.- -+++|+.++ -.....+.+.|
T Consensus 1400 ~~~~~~~~e~~~~~~~~er~-~qs~~~~~~fi~~y~fd~~~~ 1440 (1640)
T KOG0262|consen 1400 PEPEEEDQEGQPEVNAVERR-EQSVKKRHDFISRYTFDKESG 1440 (1640)
T ss_pred CCcccccccCCchhhHHHHH-HHHHHHHHHHhhhhccccccC
No 452
>PRK14873 primosome assembly protein PriA; Provisional
Probab=32.38 E-value=31 Score=36.25 Aligned_cols=38 Identities=13% Similarity=0.307 Sum_probs=26.3
Q ss_pred CceEEecCCC-cccccccCcccccccccCCcccccccccccccC
Q 024658 10 PARMYCESDQ-ASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSL 52 (264)
Q Consensus 10 pA~vyC~aD~-A~LC~~CDa~VHsAN~La~rH~RvpLC~~C~~~ 52 (264)
...++|+.+. ..-|..||..+-.. +..+.+.|..|...
T Consensus 381 ap~l~C~~Cg~~~~C~~C~~~L~~h-----~~~~~l~Ch~CG~~ 419 (665)
T PRK14873 381 VPSLACARCRTPARCRHCTGPLGLP-----SAGGTPRCRWCGRA 419 (665)
T ss_pred CCeeEhhhCcCeeECCCCCCceeEe-----cCCCeeECCCCcCC
Confidence 3567888875 78899998554321 23457889999764
No 453
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=31.59 E-value=46 Score=37.27 Aligned_cols=36 Identities=19% Similarity=0.271 Sum_probs=26.4
Q ss_pred cccccccccccccCCC----CceecccCCCCcccCchhhh
Q 024658 39 KHLRCLLCHVCQSLTP----WKASGPKLGPTVSVCDACVA 74 (264)
Q Consensus 39 rH~RvpLC~~C~~~p~----~ka~~~C~~d~~~LC~~Cd~ 74 (264)
++.-..+|+.|...-. --..+.|.+|+-+||..|.-
T Consensus 13 ~~~~~qiCqICGD~vg~~~~Ge~FVAC~eC~FPVCrpCYE 52 (1079)
T PLN02638 13 KHGGGQVCQICGDNVGKTVDGEPFVACDVCAFPVCRPCYE 52 (1079)
T ss_pred cccCCceeeecccccCcCCCCCEEEEeccCCCccccchhh
Confidence 3444458999975322 22678999999999999986
No 454
>KOG2807 consensus RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 [Transcription; Replication, recombination and repair]
Probab=31.45 E-value=23 Score=35.06 Aligned_cols=67 Identities=18% Similarity=0.239 Sum_probs=46.0
Q ss_pred CceEEecCCCcccc------cccCcccccccccCC-ccccccc----------------ccccccCCCCceecccCCCCc
Q 024658 10 PARMYCESDQASLC------WDCDEKVHCANFLVA-KHLRCLL----------------CHVCQSLTPWKASGPKLGPTV 66 (264)
Q Consensus 10 pA~vyC~aD~A~LC------~~CDa~VHsAN~La~-rH~RvpL----------------C~~C~~~p~~ka~~~C~~d~~ 66 (264)
-+.++|....|+-| .-|+..+=++.-|++ -|.=+|| |-+|+..-..+..+.|..|..
T Consensus 274 ~~Gy~CP~CkakvCsLP~eCpiC~ltLVss~hLARSyhhL~PL~~F~Eip~~~~~~~~~Cf~C~~~~~~~~~y~C~~Ck~ 353 (378)
T KOG2807|consen 274 GGGYFCPQCKAKVCSLPIECPICSLTLVSSPHLARSYHHLFPLKPFVEIPETEYNGSRFCFACQGELLSSGRYRCESCKN 353 (378)
T ss_pred cCceeCCcccCeeecCCccCCccceeEecchHHHHHHHhhcCCcchhhccccccCCCcceeeeccccCCCCcEEchhccc
Confidence 47888888888765 457766555444444 2333333 667855444557899999999
Q ss_pred ccCchhhh-cc
Q 024658 67 SVCDACVA-AA 76 (264)
Q Consensus 67 ~LC~~Cd~-~~ 76 (264)
.+|..|+. .|
T Consensus 354 ~FCldCDv~iH 364 (378)
T KOG2807|consen 354 VFCLDCDVFIH 364 (378)
T ss_pred eeeccchHHHH
Confidence 99999999 55
No 455
>cd02335 ZZ_ADA2 Zinc finger, ZZ type. Zinc finger present in ADA2, a putative transcriptional adaptor, and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding.
Probab=31.41 E-value=50 Score=23.07 Aligned_cols=32 Identities=16% Similarity=0.249 Sum_probs=24.6
Q ss_pred cccccccCCCCceecccCCC-CcccCchhhhcc
Q 024658 45 LCHVCQSLTPWKASGPKLGP-TVSVCDACVAAA 76 (264)
Q Consensus 45 LC~~C~~~p~~ka~~~C~~d-~~~LC~~Cd~~~ 76 (264)
.|..|...+..-.-+.|..| ..-||..|...+
T Consensus 2 ~Cd~C~~~~~~g~r~~C~~C~d~dLC~~Cf~~g 34 (49)
T cd02335 2 HCDYCSKDITGTIRIKCAECPDFDLCLECFSAG 34 (49)
T ss_pred CCCCcCCCCCCCcEEECCCCCCcchhHHhhhCc
Confidence 37778766644466888888 788999999976
No 456
>cd02340 ZZ_NBR1_like Zinc finger, ZZ type. Zinc finger present in Drosophila ref(2)P, NBR1, Human sequestosome 1 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Drosophila ref(2)P appears to control the multiplication of sigma rhabdovirus. NBR1 (Next to BRCA1 gene 1 protein) interacts with fasciculation and elongation protein zeta-1 (FEZ1) and calcium and integrin binding protein (CIB), and may function in cell signalling pathways. Sequestosome 1 is a phosphotyrosine independent ligand for the Lck SH2 domain and binds noncovalently to ubiquitin via its UBA domain.
Probab=31.37 E-value=43 Score=23.07 Aligned_cols=31 Identities=23% Similarity=0.415 Sum_probs=23.0
Q ss_pred cccccccCCCCceecccCCC-CcccCchhhhcc
Q 024658 45 LCHVCQSLTPWKASGPKLGP-TVSVCDACVAAA 76 (264)
Q Consensus 45 LC~~C~~~p~~ka~~~C~~d-~~~LC~~Cd~~~ 76 (264)
.|..|+. +-.-.-+.|..| ..-||..|...+
T Consensus 2 ~Cd~C~~-~i~G~ry~C~~C~d~dLC~~C~~~~ 33 (43)
T cd02340 2 ICDGCQG-PIVGVRYKCLVCPDYDLCESCEAKG 33 (43)
T ss_pred CCCCCCC-cCcCCeEECCCCCCccchHHhhCcC
Confidence 4677877 434467788888 688999998854
No 457
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=30.85 E-value=26 Score=34.85 Aligned_cols=26 Identities=12% Similarity=0.114 Sum_probs=22.6
Q ss_pred HHHHHHhhhhccccccccCcchhhhH
Q 024658 227 TAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 227 t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
.+|-..+.|||.-.|-|||.|+-|+|
T Consensus 168 ~qI~~Av~~lH~~nIAHRDlKpENLL 193 (400)
T KOG0604|consen 168 KQIGLAVRYLHSMNIAHRDLKPENLL 193 (400)
T ss_pred HHHHHHHHHHHhcchhhccCChhhee
Confidence 44555789999999999999999987
No 458
>PF09073 BUD22: BUD22; InterPro: IPR015158 BUD22 has been shown in yeast to be a nuclear protein involved in bud-site selection. It plays a role in positioning the proximal bud pole signal [].
Probab=30.07 E-value=72 Score=31.53 Aligned_cols=71 Identities=24% Similarity=0.406 Sum_probs=0.0
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCCCCCc------------chhhccccCCceecCCCCCCCCCCCCCCCCCCCCCCc
Q 024658 93 QSERISGHDETDDDDDYEDEDDDDDDDEDPD------------EEEEEEDDENQVVPWSGDDSQSPPQPPPPPVSSSCSS 160 (264)
Q Consensus 93 p~~~~~~~d~~~~dd~~~ded~~~dd~e~e~------------~~~~ee~~enqvVp~s~~~~~~~~~~~pp~~ssss~~ 160 (264)
....++......+++++++++++.+++.|++ ++|+++++++.++......+.+......-..|.+.+.
T Consensus 177 ~~~~~~~d~~~~e~~~~~~~~~~~~~~~d~~~~~q~d~~l~~Ssdee~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~ 256 (432)
T PF09073_consen 177 EESEEGEDSSDDESDEEDDEEDDEDEESDDEDLSQYDGLLASSSDEESEDEDDPSIDEDESESESEEDDEDESDSDSDSP 256 (432)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhccccCCccccccccccccCCccccccccccccccccccccccc
Q ss_pred ccc
Q 024658 161 ISE 163 (264)
Q Consensus 161 ~~~ 163 (264)
..+
T Consensus 257 s~s 259 (432)
T PF09073_consen 257 SDS 259 (432)
T ss_pred ccc
No 459
>cd02341 ZZ_ZZZ3 Zinc finger, ZZ type. Zinc finger present in ZZZ3 (ZZ finger containing 3) and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding.
Probab=29.87 E-value=47 Score=23.63 Aligned_cols=41 Identities=15% Similarity=0.086 Sum_probs=0.0
Q ss_pred ccccccCCCCceecccCCCC---cccCchhhhcc--cCCCCCCccc
Q 024658 46 CHVCQSLTPWKASGPKLGPT---VSVCDACVAAA--RCGVNDDDKA 86 (264)
Q Consensus 46 C~~C~~~p~~ka~~~C~~d~---~~LC~~Cd~~~--n~~~H~r~pV 86 (264)
|..|...|-.-.-+.|..|. .-||..|...+ ....|.-++|
T Consensus 3 Cd~C~~~pI~G~R~~C~~C~~~d~DlC~~C~~~~~~H~~~H~~~~i 48 (48)
T cd02341 3 CDSCGIEPIPGTRYHCSECDDGDFDLCQDCVVKGESHQEDHWLVKI 48 (48)
T ss_pred CCCCCCCccccceEECCCCCCCCCccCHHHHhCcCCCCCCCceeeC
No 460
>cd02249 ZZ Zinc finger, ZZ type. Zinc finger present in dystrophin, CBP/p300 and many other proteins. The ZZ motif coordinates one or two zinc ions and most likely participates in ligand binding or molecular scaffolding. Many proteins containing ZZ motifs have other zinc-binding motifs as well, and the majority serve as scaffolds in pathways involving acetyltransferase, protein kinase, or ubiqitin-related activity. ZZ proteins can be grouped into the following functional classes: chromatin modifying, cytoskeletal scaffolding, ubiquitin binding or conjugating, and membrane receptor or ion-channel modifying proteins.
Probab=29.85 E-value=51 Score=22.54 Aligned_cols=44 Identities=16% Similarity=0.196 Sum_probs=0.0
Q ss_pred ccccccccCCCCceecccCCCC-cccCchhhhcccCCCCC-Ccccccc
Q 024658 44 LLCHVCQSLTPWKASGPKLGPT-VSVCDACVAAARCGVND-DDKAVVR 89 (264)
Q Consensus 44 pLC~~C~~~p~~ka~~~C~~d~-~~LC~~Cd~~~n~~~H~-r~pV~~~ 89 (264)
..|..|.. +-+-.-+.|..|. .-||..|...+. +.|. ..+..++
T Consensus 1 ~~C~~C~~-~i~g~r~~C~~C~d~dLC~~Cf~~~~-~~H~~~H~~~~~ 46 (46)
T cd02249 1 YSCDGCLK-PIVGVRYHCLVCEDFDLCSSCYAKGK-KGHPPDHSFTEI 46 (46)
T ss_pred CCCcCCCC-CCcCCEEECCCCCCCcCHHHHHCcCc-CCCCCCCCEeEC
No 461
>KOG1834 consensus Calsyntenin [Extracellular structures]
Probab=29.74 E-value=32 Score=37.08 Aligned_cols=40 Identities=28% Similarity=0.582 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCcchhhccccCCceec
Q 024658 98 SGHDETDDDDDYEDEDDDDDDDEDPDEEEEEEDDENQVVP 137 (264)
Q Consensus 98 ~~~d~~~~dd~~~ded~~~dd~e~e~~~~~ee~~enqvVp 137 (264)
...+++++..++++||+.+.++-+++|.+++||++..-|+
T Consensus 892 s~ee~~e~EeeeE~e~~ee~s~~~~~ds~sedEee~~e~~ 931 (952)
T KOG1834|consen 892 SIEEESEEEEEEETEDEEESSDSDSADSESEDEEEGTEVG 931 (952)
T ss_pred cccccccccccccccccccccccccccCccchhhhccccC
No 462
>PF04438 zf-HIT: HIT zinc finger; InterPro: IPR007529 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the HIT-type zinc finger, which contains 7 conserved cysteines and one histidine that can potentially coordinate two zinc atoms. It has been named after the first protein that originally defined the domain: the yeast HIT1 protein (P46973 from SWISSPROT) []. The HIT-type zinc finger displays some sequence similarities to the MYND-type zinc finger. The function of this domain is unknown but it is mainly found in nuclear proteins involved in gene regulation and chromatin remodeling. This domain is also found in the thyroid receptor interacting protein 3 (TRIP-3) Q15649 from SWISSPROT, that specifically interacts with the ligand binding domain of the thyroid receptor. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 2YQP_A 2YQQ_A 1X4S_A.
Probab=29.08 E-value=23 Score=22.98 Aligned_cols=24 Identities=25% Similarity=0.315 Sum_probs=0.0
Q ss_pred ccccccccccCCCCceecccCCCCcccC
Q 024658 42 RCLLCHVCQSLTPWKASGPKLGPTVSVC 69 (264)
Q Consensus 42 RvpLC~~C~~~p~~ka~~~C~~d~~~LC 69 (264)
+..+|.+|.. + +.+.|..|.+.+|
T Consensus 1 ~~~~C~vC~~-~---~kY~Cp~C~~~~C 24 (30)
T PF04438_consen 1 PRKLCSVCGN-P---AKYRCPRCGARYC 24 (30)
T ss_dssp --EEETSSSS-E---ESEE-TTT--EES
T ss_pred CcCCCccCcC-C---CEEECCCcCCcee
No 463
>KOG0127 consensus Nucleolar protein fibrillarin NOP77 (RRM superfamily) [RNA processing and modification]
Probab=28.87 E-value=27 Score=36.72 Aligned_cols=32 Identities=28% Similarity=0.628 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcchhhccccC
Q 024658 101 DETDDDDDYEDEDDDDDDDEDPDEEEEEEDDE 132 (264)
Q Consensus 101 d~~~~dd~~~ded~~~dd~e~e~~~~~ee~~e 132 (264)
.+|.|++..+|+++|.|+++-|+|.+++|+.+
T Consensus 215 ~eEed~e~~~d~~~~~~~Ed~e~d~edeEe~D 246 (678)
T KOG0127|consen 215 KEEEDKEADEDDGKDFDEEDGEEDSEDEEETD 246 (678)
T ss_pred chhhhcccccccccccchhccccccccccccc
No 464
>KOG4672 consensus Uncharacterized conserved low complexity protein [Function unknown]
Probab=28.79 E-value=92 Score=31.86 Aligned_cols=68 Identities=19% Similarity=0.223 Sum_probs=0.0
Q ss_pred ccCCCCccccCCCCCCCCCCCCCCCCCC----------------CCCCCCCcchhhccccCCceecCCCCCCCCCCCCCC
Q 024658 88 VRGGSQSERISGHDETDDDDDYEDEDDD----------------DDDDEDPDEEEEEEDDENQVVPWSGDDSQSPPQPPP 151 (264)
Q Consensus 88 ~~~g~p~~~~~~~d~~~~dd~~~ded~~----------------~dd~e~e~~~~~ee~~enqvVp~s~~~~~~~~~~~p 151 (264)
.+-+...+-+|.-.+.+.|..+|.-|+. .++++++++++.+||+-...++-+-++....|++++
T Consensus 231 d~~ss~~ed~g~pe~~~~dkh~ds~d~a~~~~i~e~~~~v~~~~~~~~~d~~dds~~eden~~~~~~sn~sk~a~P~~~a 310 (487)
T KOG4672|consen 231 DGLSSNFEDSGEPEEEGHDKHYDSIDLAPDNRINENITSVPLLPPPGIPDNEDDSRPEDENASSFQNSNLSKTAIPEPDA 310 (487)
T ss_pred ccccCCCCCCCCccccccccccccccccchhccccccccccccCCCCCCccccccchhhhccccccccccccccCCCCCC
Q ss_pred CCCC
Q 024658 152 PPVS 155 (264)
Q Consensus 152 p~~s 155 (264)
|..+
T Consensus 311 P~~~ 314 (487)
T KOG4672|consen 311 PLQP 314 (487)
T ss_pred Cccc
No 465
>KOG2141 consensus Protein involved in high osmolarity signaling pathway [Signal transduction mechanisms]
Probab=28.71 E-value=50 Score=35.74 Aligned_cols=75 Identities=23% Similarity=0.323 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCcchhhccccCCceecCCCCCCCCCCCCCCCCCCCCC---------Cccccchhhh
Q 024658 98 SGHDETDDDDDYEDEDDDDDDDEDPDEEEEEEDDENQVVPWSGDDSQSPPQPPPPPVSSSC---------SSISEEDFSL 168 (264)
Q Consensus 98 ~~~d~~~~dd~~~ded~~~dd~e~e~~~~~ee~~enqvVp~s~~~~~~~~~~~pp~~ssss---------~~~~~~~~~~ 168 (264)
|+.++.++.++..-.|+++.+++++++++..-+.+|-.+.-+.+--..+|--.++..++|. =+.++.+..|
T Consensus 237 gs~~~~e~e~e~~~~de~~e~~~~~~d~d~i~E~~~~~i~~s~~~~~~e~~~~~~~~s~sKYvPPslRkkl~~~~~sE~l 316 (822)
T KOG2141|consen 237 GSEDEDESEDEKDSVDEEEESEEDNEDDDGISEISNSEIRDSALKKSEEPEYLRKINSSSKYVPPSLRKKLETSSESEQL 316 (822)
T ss_pred cCcccchhhhhccchhhhhhhhhcccCCccccccccccccCCccccCCCcccccccccccccCCHHHHHHhcCccchHHH
Q ss_pred hhcc
Q 024658 169 KRMR 172 (264)
Q Consensus 169 kr~r 172 (264)
-|+|
T Consensus 317 ~rl~ 320 (822)
T KOG2141|consen 317 QRLR 320 (822)
T ss_pred HHHH
No 466
>KOG4364 consensus Chromatin assembly factor-I [Chromatin structure and dynamics]
Probab=28.67 E-value=53 Score=35.33 Aligned_cols=55 Identities=24% Similarity=0.284 Sum_probs=0.0
Q ss_pred CCccccccCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCcchhhccccCCceec
Q 024658 82 DDDKAVVRGGSQSERISGHDETDDDDDYEDEDDDDDDDEDPDEEEEEEDDENQVVP 137 (264)
Q Consensus 82 ~r~pV~~~~g~p~~~~~~~d~~~~dd~~~ded~~~dd~e~e~~~~~ee~~enqvVp 137 (264)
.|.|+.--.+..+.++.+.+=|++.- .+.=-+++||++++.+++-+|+.+.-.||
T Consensus 507 arrPlAq~~llDYEVdSDeEWEEEep-GESlS~sEddedd~~eEd~edEdDgffVP 561 (811)
T KOG4364|consen 507 ARRPLAQDPLLDYEVDSDEEWEEEEP-GESLSDSEDDEDDSLEEDCEDEDDGFFVP 561 (811)
T ss_pred cCCcccccccccccccCcccccccCC-CccccccccccccccccccccccCCeecC
No 467
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=28.46 E-value=26 Score=38.82 Aligned_cols=27 Identities=19% Similarity=0.234 Sum_probs=0.0
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
..||-++++|||.|.++|||.|.-|+|
T Consensus 804 ~~QIAkgM~YLe~qrlVHrdLaaRNVL 830 (1177)
T KOG1025|consen 804 CYQIAKGMKYLEEQRLVHRDLAARNVL 830 (1177)
T ss_pred HHHHHHHHHHHHhcchhhhhhhhhhee
No 468
>KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only]
Probab=28.12 E-value=26 Score=39.05 Aligned_cols=26 Identities=42% Similarity=0.722 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCC--CCCCcchh
Q 024658 101 DETDDDDDYEDEDDDDDD--DEDPDEEE 126 (264)
Q Consensus 101 d~~~~dd~~~ded~~~dd--~e~e~~~~ 126 (264)
|.++|+|...-||++||+ +|.+||||
T Consensus 316 d~~eDed~~~~ed~eDde~~deYsDDeD 343 (1233)
T KOG1824|consen 316 DTEEDEDAMFLEDEEDDEQDDEYSDDED 343 (1233)
T ss_pred CCccchhhhhhhccccchhccccccccc
No 469
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=27.71 E-value=25 Score=36.27 Aligned_cols=25 Identities=4% Similarity=0.150 Sum_probs=0.0
Q ss_pred HHHHHhhhhccccccccCcchhhhH
Q 024658 228 AIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 228 ~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+|+.+++|||...|.|||.|.-+|+
T Consensus 428 qL~~Gv~y~h~~GiahrdlK~enll 452 (601)
T KOG0590|consen 428 QLLRGVKYLHSMGLAHRDLKLENLL 452 (601)
T ss_pred HHHHHHHHHHhcCceeccCccccEE
No 470
>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.
Probab=27.56 E-value=1.1e+02 Score=25.20 Aligned_cols=83 Identities=27% Similarity=0.379 Sum_probs=0.0
Q ss_pred cccccCCCCceecccCCCCcccCchhhhcccCC-CCCCccccccCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCcch
Q 024658 47 HVCQSLTPWKASGPKLGPTVSVCDACVAAARCG-VNDDDKAVVRGGSQSERISGHDETDDDDDYEDEDDDDDDDEDPDEE 125 (264)
Q Consensus 47 ~~C~~~p~~ka~~~C~~d~~~LC~~Cd~~~n~~-~H~r~pV~~~~g~p~~~~~~~d~~~~dd~~~ded~~~dd~e~e~~~ 125 (264)
..|+.-. +.||=+.=.-.+|..|-..-... ......+.++...+.+.+........+....++++++.+.+++..+
T Consensus 10 R~Cp~CG---~kFYDLnk~PivCP~CG~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~d~~~~dd~~~~~~~dDd~~d 86 (108)
T PF09538_consen 10 RTCPSCG---AKFYDLNKDPIVCPKCGTEFPPEPPLKSRRPRPDEEEAAADEEEEDEEEDDDVSLDDDDDDDDDDDDLDD 86 (108)
T ss_pred ccCCCCc---chhccCCCCCccCCCCCCccCccccccccccccccccccccccccccccccccccccccccccccccccc
Q ss_pred hhccccC
Q 024658 126 EEEEDDE 132 (264)
Q Consensus 126 ~~ee~~e 132 (264)
.++++.+
T Consensus 87 ~~dd~~d 93 (108)
T PF09538_consen 87 DDDDDVD 93 (108)
T ss_pred ccccccc
No 471
>PF15449 Retinal: Retinal protein
Probab=27.01 E-value=61 Score=36.63 Aligned_cols=58 Identities=29% Similarity=0.459 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCcchhhccccCCceecCCCCCCCCCCCCCCCCCCCCCCccccchhhhhhccc
Q 024658 110 EDEDDDDDDDEDPDEEEEEEDDENQVVPWSGDDSQSPPQPPPPPVSSSCSSISEEDFSLKRMRD 173 (264)
Q Consensus 110 ~ded~~~dd~e~e~~~~~ee~~enqvVp~s~~~~~~~~~~~pp~~ssss~~~~~~~~~~kr~r~ 173 (264)
+.-..+++||.+.+|+||+|.+-....+|.- .+.++-+-||-...++--....||+|.
T Consensus 483 ~~ps~~e~eDss~eEeeede~~s~s~~~~q~------~a~~~RP~SSPa~~es~fq~~~krl~s 540 (1287)
T PF15449_consen 483 DTPSLSEDEDSSPEEEEEDEVSSMSLCTWQE------KALPSRPRSSPAGTESPFQPHSKRLRS 540 (1287)
T ss_pred CCccccccCCCChhhcccccccccccccccc------ccCCCCCCCCCcccccccccchhhccC
No 472
>PHA02811 putative host range protein; Provisional
Probab=26.87 E-value=39 Score=30.91 Aligned_cols=29 Identities=45% Similarity=0.724 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcchhhcc
Q 024658 101 DETDDDDDYEDEDDDDDDDEDPDEEEEEE 129 (264)
Q Consensus 101 d~~~~dd~~~ded~~~dd~e~e~~~~~ee 129 (264)
+..++|++++++++++++||..+++++-|
T Consensus 169 ~~~~~d~d~d~~~~~~~~d~~~~~~~~~~ 197 (197)
T PHA02811 169 ISSDDDDDNDNADNDEEDDEVNDIEDDYE 197 (197)
T ss_pred eccccccccccccccccccccccccccCC
No 473
>KOG2652 consensus RNA polymerase II transcription initiation factor TFIIA, large chain [Transcription]
Probab=26.44 E-value=49 Score=32.67 Aligned_cols=42 Identities=31% Similarity=0.530 Sum_probs=0.0
Q ss_pred CCCccccCCCCCCCCCCCCCCCCCCCCCCCCCc--chhhccccC
Q 024658 91 GSQSERISGHDETDDDDDYEDEDDDDDDDEDPD--EEEEEEDDE 132 (264)
Q Consensus 91 g~p~~~~~~~d~~~~dd~~~ded~~~dd~e~e~--~~~~ee~~e 132 (264)
|.-..++.+.+|+++++...++|++.+.++++| |+|.-+.++
T Consensus 255 g~~~~~eE~e~Eee~~~~~~~~dee~~n~Dd~D~~Eeeplnsed 298 (348)
T KOG2652|consen 255 GTGDTSEEDENEEEDDDPDPDEDEELGNSDDDDGVEEEPLNSED 298 (348)
T ss_pred ccccccccccccccccCcccchhhhcccccccCccccccccCcc
No 474
>KOG0127 consensus Nucleolar protein fibrillarin NOP77 (RRM superfamily) [RNA processing and modification]
Probab=26.34 E-value=36 Score=35.87 Aligned_cols=40 Identities=33% Similarity=0.597 Sum_probs=0.0
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCC--CCCCcchhhccccCCce
Q 024658 96 RISGHDETDDDDDYEDEDDDDDD--DEDPDEEEEEEDDENQV 135 (264)
Q Consensus 96 ~~~~~d~~~~dd~~~ded~~~dd--~e~e~~~~~ee~~enqv 135 (264)
.+.|+|...+|-++++||+++.| .|..++.+++|+++-+|
T Consensus 224 ~d~~~~~~~Ed~e~d~edeEe~D~~se~~ee~~~~Eee~~~v 265 (678)
T KOG0127|consen 224 EDDGKDFDEEDGEEDSEDEEETDGNSEAFEEGEESEEEEDDV 265 (678)
T ss_pred cccccccchhcccccccccccccccchhhhcccccccccccc
No 475
>PF12253 CAF1A: Chromatin assembly factor 1 subunit A; InterPro: IPR022043 The CAF-1 or chromatin assembly factor-1 consists of three subunits, and this is the first, or A []. The A domain is uniquely required for the progression of S phase in mouse cells [], independent of its ability to promote histone deposition [] but dependent on its ability to interact with HP1 - heterochromatin protein 1-rich heterochromatin domains next to centromeres that are crucial for chromosome segregation during mitosis. This HP1-CAF-1 interaction module functions as a built-in replication control for heterochromatin, which, like a control barrier, has an impact on S-phase progression in addition to DNA-based checkpoints [].
Probab=26.09 E-value=77 Score=24.83 Aligned_cols=47 Identities=6% Similarity=0.263 Sum_probs=0.0
Q ss_pred Ccccccc-CCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCcchhhcc
Q 024658 83 DDKAVVR-GGSQSERISGHDETDDDDDYEDEDDDDDDDEDPDEEEEEE 129 (264)
Q Consensus 83 r~pV~~~-~g~p~~~~~~~d~~~~dd~~~ded~~~dd~e~e~~~~~ee 129 (264)
|.|+.-- .+--...+.+.+=+++++-++-+++++++++++++++.++
T Consensus 29 r~P~~~d~~~lDYdyDSd~EWeE~e~GEdl~~~eeeeed~e~d~d~D~ 76 (77)
T PF12253_consen 29 RNPFAKDLPNLDYDYDSDDEWEEEEEGEDLDSDEEEEEDEEDDDDMDG 76 (77)
T ss_pred CCcccccccccceecCCccccccCCCCccccccccccccccccccccC
No 476
>PF07975 C1_4: TFIIH C1-like domain; InterPro: IPR004595 All proteins in this domain for which functions are known are components of the TFIIH complex which is involved in the initiation of transcription and nucleotide excision repair. It includes the yeast transcription factor Ssl1 (Suppressor of stem-loop protein 1) that is essential for translation initiation and affects UV resistance. The C-terminal region is essential for transcription activity. This regions binds three zinc atoms through two independent domain. The first contains a C4 zinc finger motif, whereas the second is characterised by a CX(2)CX(2-4)FCADCD motif. The solution structure of the second C-terminal domain revealed homology with the regulatory domain of protein kinase C [].; GO: 0006281 DNA repair, 0005634 nucleus; PDB: 1Z60_A.
Probab=25.93 E-value=37 Score=24.78 Aligned_cols=31 Identities=19% Similarity=0.198 Sum_probs=0.0
Q ss_pred ccccccCCCCc-------eecccCCCCcccCchhhh-cc
Q 024658 46 CHVCQSLTPWK-------ASGPKLGPTVSVCDACVA-AA 76 (264)
Q Consensus 46 C~~C~~~p~~k-------a~~~C~~d~~~LC~~Cd~-~~ 76 (264)
|-.|...-+.. ..+.|..|...+|..|++ +|
T Consensus 2 CfgC~~~~~~~~~~~~~~~~y~C~~C~~~FC~dCD~fiH 40 (51)
T PF07975_consen 2 CFGCQKPFPDGPEKKADSSRYRCPKCKNHFCIDCDVFIH 40 (51)
T ss_dssp ETTTTEE-TTS-------EEE--TTTT--B-HHHHHTTT
T ss_pred CccCCCCCCCcccccccCCeEECCCCCCccccCcChhhh
No 477
>KOG2652 consensus RNA polymerase II transcription initiation factor TFIIA, large chain [Transcription]
Probab=25.40 E-value=64 Score=31.90 Aligned_cols=51 Identities=27% Similarity=0.416 Sum_probs=0.0
Q ss_pred ccccCCCCccccCCCCCCCCCCCCCCCCCCCCCCC--CCcchhhccccC---Ccee
Q 024658 86 AVVRGGSQSERISGHDETDDDDDYEDEDDDDDDDE--DPDEEEEEEDDE---NQVV 136 (264)
Q Consensus 86 V~~~~g~p~~~~~~~d~~~~dd~~~ded~~~dd~e--~e~~~~~ee~~e---nqvV 136 (264)
|.++.+.-++.+...++.+++.++++|-...|+|+ ||+.-++|+|.- |-||
T Consensus 253 ~Dg~~~~~eE~e~Eee~~~~~~~~dee~~n~Dd~D~~EeeplnsedDvsdt~nvVv 308 (348)
T KOG2652|consen 253 VDGTGDTSEEDENEEEDDDPDPDEDEELGNSDDDDGVEEEPLNSEDDVSDTQNVVV 308 (348)
T ss_pred ccccccccccccccccccCcccchhhhcccccccCccccccccCcccccccceeEE
No 478
>PF15243 ANAPC15: Anaphase-promoting complex subunit 15
Probab=25.22 E-value=41 Score=27.30 Aligned_cols=28 Identities=25% Similarity=0.712 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCCcchhhccccC
Q 024658 105 DDDDYEDEDDDDDDDEDPDEEEEEEDDE 132 (264)
Q Consensus 105 ~dd~~~ded~~~dd~e~e~~~~~ee~~e 132 (264)
++.+.++++++++.++.|+.+++++|-+
T Consensus 63 ~~~e~d~e~~~dd~d~~e~~~~d~de~~ 90 (92)
T PF15243_consen 63 EEEEEDDEDEDDDSDDSEESMQDDDEMN 90 (92)
T ss_pred ccccccccccccccccccchhccchhcc
No 479
>PF14951 DUF4503: Domain of unknown function (DUF4503)
Probab=25.01 E-value=52 Score=32.93 Aligned_cols=54 Identities=24% Similarity=0.347 Sum_probs=0.0
Q ss_pred CCCCCCCC-CceEEecCCCcccccccCcccccccccCCcccccccccccccCCCCceec
Q 024658 2 RKCELCEC-PARMYCESDQASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASG 59 (264)
Q Consensus 2 ~~Cd~C~~-pA~vyC~aD~A~LC~~CDa~VHsAN~La~rH~RvpLC~~C~~~p~~ka~~ 59 (264)
|.|+.|+. .-...=..-.++.|..|..-|- ++++++|--|-|- |+..|...+.+
T Consensus 275 PvCd~CGn~rLe~~pe~rg~~~C~~Cs~~V~--sP~~r~~LeVfl~--Cps~p~ctvKV 329 (389)
T PF14951_consen 275 PVCDRCGNGRLEQSPEDRGAFSCGDCSRVVT--SPVLRMHLEVFLD--CPSRPQCTVKV 329 (389)
T ss_pred ccccccCCccceeCccCCCceeccchhhhcc--CcceeeeEEEEEe--CCCCCCceEEE
No 480
>TIGR00595 priA primosomal protein N'. All proteins in this family for which functions are known are components of the primosome which is involved in replication, repair, and recombination.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=24.95 E-value=55 Score=32.96 Aligned_cols=47 Identities=23% Similarity=0.357 Sum_probs=0.0
Q ss_pred eEEecCCC-cccccccCcccccccccCCcccccccccccccCCCCceecccCCCC
Q 024658 12 RMYCESDQ-ASLCWDCDEKVHCANFLVAKHLRCLLCHVCQSLTPWKASGPKLGPT 65 (264)
Q Consensus 12 ~vyC~aD~-A~LC~~CDa~VHsAN~La~rH~RvpLC~~C~~~p~~ka~~~C~~d~ 65 (264)
.++|+.+. ..-|..||..+-.. ++.+.+.|..|....+ ..-.|+.|.
T Consensus 213 ~~~C~~Cg~~~~C~~C~~~l~~h-----~~~~~l~Ch~Cg~~~~--~~~~Cp~C~ 260 (505)
T TIGR00595 213 NLLCRSCGYILCCPNCDVSLTYH-----KKEGKLRCHYCGYQEP--IPKTCPQCG 260 (505)
T ss_pred eeEhhhCcCccCCCCCCCceEEe-----cCCCeEEcCCCcCcCC--CCCCCCCCC
No 481
>PF05320 Pox_RNA_Pol_19: Poxvirus DNA-directed RNA polymerase 19 kDa subunit; InterPro: IPR007984 DNA-directed RNA polymerases 2.7.7.6 from EC (also known as DNA-dependent RNA polymerases) are responsible for the polymerisation of ribonucleotides into a sequence complementary to the template DNA. In eukaryotes, there are three different forms of DNA-directed RNA polymerases transcribing different sets of genes. Most RNA polymerases are multimeric enzymes and are composed of a variable number of subunits. The core RNA polymerase complex consists of five subunits (two alpha, one beta, one beta-prime and one omega) and is sufficient for transcription elongation and termination but is unable to initiate transcription. Transcription initiation from promoter elements requires a sixth, dissociable subunit called a sigma factor, which reversibly associates with the core RNA polymerase complex to form a holoenzyme []. The core RNA polymerase complex forms a "crab claw"-like structure with an internal channel running along the full length []. The key functional sites of the enzyme, as defined by mutational and cross-linking analysis, are located on the inner wall of this channel. RNA synthesis follows after the attachment of RNA polymerase to a specific site, the promoter, on the template DNA strand. The RNA synthesis process continues until a termination sequence is reached. The RNA product, which is synthesised in the 5' to 3'direction, is known as the primary transcript. Eukaryotic nuclei contain three distinct types of RNA polymerases that differ in the RNA they synthesise: RNA polymerase I: located in the nucleoli, synthesises precursors of most ribosomal RNAs. RNA polymerase II: occurs in the nucleoplasm, synthesises mRNA precursors. RNA polymerase III: also occurs in the nucleoplasm, synthesises the precursors of 5S ribosomal RNA, the tRNAs, and a variety of other small nuclear and cytosolic RNAs. Eukaryotic cells are also known to contain separate mitochondrial and chloroplast RNA polymerases. Eukaryotic RNA polymerases, whose molecular masses vary in size from 500 to 700 kDa, contain two non-identical large (>100 kDa) subunits and an array of up to 12 different small (less than 50 kDa) subunits. The poxvirus DNA-directed RNA polymerase (2.7.7.6 from EC) catalyses the transcription of DNA into RNA. It consists of at least eight subunits, this is the 19 kDa subunit.; GO: 0003677 DNA binding, 0003899 DNA-directed RNA polymerase activity, 0006351 transcription, DNA-dependent
Probab=24.89 E-value=21 Score=31.90 Aligned_cols=30 Identities=50% Similarity=0.683 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCcchhhccccC
Q 024658 103 TDDDDDYEDEDDDDDDDEDPDEEEEEEDDE 132 (264)
Q Consensus 103 ~~~dd~~~ded~~~dd~e~e~~~~~ee~~e 132 (264)
++.+|..+.+.|++++++.|++++++++.+
T Consensus 2 ~ds~di~~~~sde~~~~~yee~~e~~~~~e 31 (167)
T PF05320_consen 2 EDSDDIIDYESDEDDIEEYEEEEEDEEDAE 31 (167)
T ss_pred cchHHHHhhhccCcchhhhhhhcccccccc
No 482
>KOG0262 consensus RNA polymerase I, large subunit [Transcription]
Probab=24.30 E-value=65 Score=37.07 Aligned_cols=52 Identities=31% Similarity=0.571 Sum_probs=0.0
Q ss_pred ccccccCCCCccccCCCCCCCCCCCCCCCCCC------------------CCCCCCCcchhhccccCCce
Q 024658 84 DKAVVRGGSQSERISGHDETDDDDDYEDEDDD------------------DDDDEDPDEEEEEEDDENQV 135 (264)
Q Consensus 84 ~pV~~~~g~p~~~~~~~d~~~~dd~~~ded~~------------------~dd~e~e~~~~~ee~~enqv 135 (264)
.|..+-.+......+|.+++++|++.++|.+| |++||+|..++.+++++++.
T Consensus 1316 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ddddas~~k~~~k~~~~~dYe~~de~e~~~~~~~e~~~~~ 1385 (1640)
T KOG0262|consen 1316 DPDDGNEVDNNDEVGGEDNEDSDDESEDDEDDDDASDAKLHKKTEEEADYESEDEDERVEEREDEGDEDE 1385 (1640)
T ss_pred CccccccCCccccccCCccccccccccccCcccchhHHHHhhhhccccCcCCCchhhhhhhhhccccccc
No 483
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=24.18 E-value=30 Score=37.44 Aligned_cols=25 Identities=24% Similarity=0.255 Sum_probs=0.0
Q ss_pred HHHHHhhhhccccccccCcchhhhH
Q 024658 228 AIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 228 ~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+|-++|.|||++...|||+|.-|||
T Consensus 499 Qi~talaYLeSkrfVHRDIAaRNiL 523 (974)
T KOG4257|consen 499 QICTALAYLESKRFVHRDIAARNIL 523 (974)
T ss_pred HHHHHHHHHHhhchhhhhhhhhhee
No 484
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=24.17 E-value=36 Score=36.31 Aligned_cols=27 Identities=7% Similarity=0.103 Sum_probs=0.0
Q ss_pred hHHHHHHhhhhccccccccCcchhhhH
Q 024658 226 STAIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 226 ~t~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
...|+-+|.+||...||.||.|=-|||
T Consensus 474 aAev~l~L~fLH~~~IIYRDlKLdNiL 500 (694)
T KOG0694|consen 474 AAEVVLGLQFLHENGIIYRDLKLDNLL 500 (694)
T ss_pred HHHHHHHHHHHHhcCceeeecchhheE
No 485
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=24.01 E-value=34 Score=38.99 Aligned_cols=25 Identities=8% Similarity=0.097 Sum_probs=0.0
Q ss_pred HHHHHhhhhccccccccCcchhhhH
Q 024658 228 AIISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 228 ~i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+|+.+|+..|++.|-|||+|.-|||
T Consensus 128 QLL~al~qcH~~gVcHGDIKsENIL 152 (1431)
T KOG1240|consen 128 QLLKALSQCHKLGVCHGDIKSENIL 152 (1431)
T ss_pred HHHHHHHHHHHcCccccccccceEE
No 486
>KOG1834 consensus Calsyntenin [Extracellular structures]
Probab=23.94 E-value=52 Score=35.58 Aligned_cols=44 Identities=20% Similarity=0.353 Sum_probs=0.0
Q ss_pred cccccCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCcchhhcc
Q 024658 85 KAVVRGGSQSERISGHDETDDDDDYEDEDDDDDDDEDPDEEEEEE 129 (264)
Q Consensus 85 pV~~~~g~p~~~~~~~d~~~~dd~~~ded~~~dd~e~e~~~~~ee 129 (264)
|+.-|-+ +.+.+.+.++|++.+.++.+..+|.+.+|.+.+|||+
T Consensus 883 Pme~~e~-~gs~ee~~e~EeeeE~e~~ee~s~~~~~ds~sedEee 926 (952)
T KOG1834|consen 883 PMEDYEK-GGSIEEESEEEEEEETEDEEESSDSDSADSESEDEEE 926 (952)
T ss_pred chHhccc-CCcccccccccccccccccccccccccccCccchhhh
No 487
>PF03896 TRAP_alpha: Translocon-associated protein (TRAP), alpha subunit; InterPro: IPR005595 The alpha-subunit of the TRAP complex (TRAP alpha) is a single-spanning membrane protein of the endoplasmic reticulum (ER) which is found in proximity of nascent polypeptide chains translocating across the membrane [].; GO: 0005783 endoplasmic reticulum
Probab=23.74 E-value=63 Score=30.80 Aligned_cols=50 Identities=30% Similarity=0.509 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCCcchhhccccCCceecCCCCCCCCCCCCCCCCC
Q 024658 105 DDDDYEDEDDDDDDDEDPDEEEEEEDDENQVVPWSGDDSQSPPQPPPPPV 154 (264)
Q Consensus 105 ~dd~~~ded~~~dd~e~e~~~~~ee~~enqvVp~s~~~~~~~~~~~pp~~ 154 (264)
.|..++++.+++..++|++|+.+.++++.+..+-..+.+...+..+-|-+
T Consensus 33 ~~~~~d~e~~~~~~~~e~~d~~~~~ed~~~~~e~~dd~~e~~~~~~sP~a 82 (285)
T PF03896_consen 33 QDDTEDEEVEDDEVEEEEEDEAEVEEDESIETEVEDDDEEDGELKPSPDA 82 (285)
T ss_pred ccccccchhhhccccccccccceecccCCCCCcccccccccccccccCCc
No 488
>KOG2141 consensus Protein involved in high osmolarity signaling pathway [Signal transduction mechanisms]
Probab=23.61 E-value=76 Score=34.47 Aligned_cols=63 Identities=29% Similarity=0.446 Sum_probs=0.0
Q ss_pred CCCccccCCCCCCC--CCCCCCCCCCCCCCCCCCcchhhccccCCceecCCCCCCCCCCCCCCCC
Q 024658 91 GSQSERISGHDETD--DDDDYEDEDDDDDDDEDPDEEEEEEDDENQVVPWSGDDSQSPPQPPPPP 153 (264)
Q Consensus 91 g~p~~~~~~~d~~~--~dd~~~ded~~~dd~e~e~~~~~ee~~enqvVp~s~~~~~~~~~~~pp~ 153 (264)
+.-+.++.|+++++ ..|+.+++|+-...||++++++++++.+.-+=+--+.-+++++-+.+++
T Consensus 222 e~~e~~e~~~~~~~sgs~~~~e~e~e~~~~de~~e~~~~~~d~d~i~E~~~~~i~~s~~~~~~e~ 286 (822)
T KOG2141|consen 222 EESEDSESGDEEDDSGSEDEDESEDEKDSVDEEEESEEDNEDDDGISEISNSEIRDSALKKSEEP 286 (822)
T ss_pred ccccccccccccccccCcccchhhhhccchhhhhhhhhcccCCccccccccccccCCccccCCCc
No 489
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=23.45 E-value=42 Score=26.76 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=0.0
Q ss_pred HHHHHHhhhhcc----ccccccCcchhhhHhhhhccccccC
Q 024658 227 TAIISSLRGLQN----QTMTDQGDAAAAITGICRLSRDHQT 263 (264)
Q Consensus 227 t~i~~sl~~l~~----~~i~~~d~~~a~i~~ic~l~~~~~~ 263 (264)
.+|+.+|.+||+ .-|.-.++....++|++++......
T Consensus 24 ~qi~~~L~~lH~~~kp~Nil~~~~~~~~~fG~~~~~~~~~~ 64 (176)
T smart00750 24 LQCLRALRELHRQAKSGNILLTWDGLLKLDGSVAFKTPEQS 64 (176)
T ss_pred HHHHHHHHHHHhcCCcccEeEcCccceeeccceEeeccccC
No 490
>KOG2773 consensus Apoptosis antagonizing transcription factor/protein transport protein [Transcription; Intracellular trafficking, secretion, and vesicular transport]
Probab=22.91 E-value=47 Score=34.04 Aligned_cols=38 Identities=39% Similarity=0.726 Sum_probs=0.0
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCCcchhhccccCC
Q 024658 96 RISGHDETDDDDDYEDEDDDDDDDEDPDEEEEEEDDEN 133 (264)
Q Consensus 96 ~~~~~d~~~~dd~~~ded~~~dd~e~e~~~~~ee~~en 133 (264)
.++++++..+.+++.+..+++..+++|++++++++.+|
T Consensus 79 ~e~~~~~~~~~~~~~e~eE~~~~~~~Es~Ee~~eed~n 116 (483)
T KOG2773|consen 79 EEGKGDEKSEEDDEEESEEENEGDEEESDEEEEEEDEN 116 (483)
T ss_pred cccccccccccccccccccccccccccccccchhhhcc
No 491
>KOG1991 consensus Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=22.81 E-value=50 Score=36.66 Aligned_cols=43 Identities=26% Similarity=0.340 Sum_probs=0.0
Q ss_pred cCCCCccccCCCCCCCCCCCCCCCCCC--------------------CCCCCCCcchhhcccc
Q 024658 89 RGGSQSERISGHDETDDDDDYEDEDDD--------------------DDDDEDPDEEEEEEDD 131 (264)
Q Consensus 89 ~~g~p~~~~~~~d~~~~dd~~~ded~~--------------------~dd~e~e~~~~~ee~~ 131 (264)
+++.....++..+|+..+|++|++.++ +||.++++.+.+|+++
T Consensus 888 ~~~e~~~~~~~~~e~~~~d~dD~d~~d~d~~~~~~~~~~~~~~~~~~ddd~d~~~~~~~ed~~ 950 (1010)
T KOG1991|consen 888 DSEEGEEEDDDEEEDFIDDEDDIDEDDQDYLDEYGELALEKEDSLDDDDDFDEDELDLEEDEL 950 (1010)
T ss_pred ccccccCCCCcchhhccCccccccccchhHHHhhccccccccccccccccccchhcccccccc
No 492
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=22.80 E-value=71 Score=35.76 Aligned_cols=71 Identities=23% Similarity=0.255 Sum_probs=0.0
Q ss_pred cccccccCCCCc----eecccCCCCcccCchhhhcccCCCCCCccccccCCCCcccc-CCCCCCCCCCCCCCCCCCCCC
Q 024658 45 LCHVCQSLTPWK----ASGPKLGPTVSVCDACVAAARCGVNDDDKAVVRGGSQSERI-SGHDETDDDDDYEDEDDDDDD 118 (264)
Q Consensus 45 LC~~C~~~p~~k----a~~~C~~d~~~LC~~Cd~~~n~~~H~r~pV~~~~g~p~~~~-~~~d~~~~dd~~~ded~~~dd 118 (264)
+|+.|...-... ..+.|..|+-++|..|.---...+.+-.|- .+.+..+- |..--+.||+++++.||.+++
T Consensus 17 ~c~iCGd~vg~~~~Ge~FVAC~eC~fpvCr~cyeye~~~g~~~cp~---c~t~y~~~~~~~~~~~d~~~~~~~dd~~~~ 92 (1044)
T PLN02915 17 TCRVCGDEVGVKEDGQPFVACHVCGFPVCKPCYEYERSEGNQCCPQ---CNTRYKRHKGCPRVEGDDEEGNDMDDFEDE 92 (1044)
T ss_pred hhhccccccCcCCCCCEEEEeccCCCccccchhhhhhhcCCccCCc---cCCchhhhcCCCCccCCccccccchhhhhh
No 493
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=22.73 E-value=41 Score=36.16 Aligned_cols=26 Identities=0% Similarity=0.055 Sum_probs=0.0
Q ss_pred HHHHHHhhhhcccc--ccccCcchhhhH
Q 024658 227 TAIISSLRGLQNQT--MTDQGDAAAAIT 252 (264)
Q Consensus 227 t~i~~sl~~l~~~~--i~~~d~~~a~i~ 252 (264)
.+|..++-+||... |||||+|--|||
T Consensus 151 ~dv~~AVa~mH~~~pPiIHRDLKiENvL 178 (738)
T KOG1989|consen 151 YDVCEAVAAMHYLKPPIIHRDLKIENVL 178 (738)
T ss_pred HHHHHHHHHHhcCCCccchhhhhhhheE
No 494
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=22.53 E-value=40 Score=34.95 Aligned_cols=24 Identities=8% Similarity=0.178 Sum_probs=0.0
Q ss_pred HHHHhhhhc---------cccccccCcchhhhH
Q 024658 229 IISSLRGLQ---------NQTMTDQGDAAAAIT 252 (264)
Q Consensus 229 i~~sl~~l~---------~~~i~~~d~~~a~i~ 252 (264)
|..+|.+|| +..|.|||.|+.|||
T Consensus 316 marGLa~LHee~p~~d~~Kp~IaHRDlkSkNVL 348 (534)
T KOG3653|consen 316 MARGLAHLHEELPRGDHHKPPIAHRDLKSKNVL 348 (534)
T ss_pred HHHHHHHhcccCCcCCCCCCccccccccccceE
No 495
>KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=22.44 E-value=45 Score=36.08 Aligned_cols=20 Identities=55% Similarity=0.976 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCCCC
Q 024658 98 SGHDETDDDDDYEDEDDDDD 117 (264)
Q Consensus 98 ~~~d~~~~dd~~~ded~~~d 117 (264)
|-+++.+++|++||||||+|
T Consensus 345 ~~~~~~~~eDdddDe~DDdD 364 (885)
T KOG2023|consen 345 GNGEDADDEDDDDDEDDDDD 364 (885)
T ss_pred cCcccccccccccccccccc
No 496
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=22.36 E-value=40 Score=35.70 Aligned_cols=24 Identities=4% Similarity=0.131 Sum_probs=0.0
Q ss_pred HHHHhhhhccccccccCcchhhhH
Q 024658 229 IISSLRGLQNQTMTDQGDAAAAIT 252 (264)
Q Consensus 229 i~~sl~~l~~~~i~~~d~~~a~i~ 252 (264)
+++.+.|||.+.||-||.|+-|.+
T Consensus 529 v~EAfeYLH~k~iIYRDLKPENll 552 (732)
T KOG0614|consen 529 VLEAFEYLHRKGIIYRDLKPENLL 552 (732)
T ss_pred HHHHHHHHHhcCceeccCChhhee
No 497
>cd02342 ZZ_UBA_plant Zinc finger, ZZ type. Zinc finger present in plant ubiquitin-associated (UBA) proteins. The ZZ motif coordinates a zinc ion and most likely participates in ligand binding or molecular scaffolding.
Probab=22.34 E-value=58 Score=23.20 Aligned_cols=24 Identities=29% Similarity=0.726 Sum_probs=0.0
Q ss_pred CCCCCCC-C---ceEEecCCCcc-ccccc
Q 024658 3 KCELCEC-P---ARMYCESDQAS-LCWDC 26 (264)
Q Consensus 3 ~Cd~C~~-p---A~vyC~aD~A~-LC~~C 26 (264)
.||.|+. | .++.|....-+ ||..|
T Consensus 2 ~CDgCg~~PI~G~RykC~~C~dyDLC~~C 30 (43)
T cd02342 2 QCDGCGVLPITGPRYKSKVKEDYDLCTIC 30 (43)
T ss_pred CCCCCCCCcccccceEeCCCCCCccHHHH
No 498
>PHA03346 US22 family homolog; Provisional
Probab=22.25 E-value=77 Score=32.76 Aligned_cols=49 Identities=37% Similarity=0.490 Sum_probs=0.0
Q ss_pred CCCCccccCCCCC------------------CCCCCCCCCCCCCCCCCCCCcchhhccccCCceecC
Q 024658 90 GGSQSERISGHDE------------------TDDDDDYEDEDDDDDDDEDPDEEEEEEDDENQVVPW 138 (264)
Q Consensus 90 ~g~p~~~~~~~d~------------------~~~dd~~~ded~~~dd~e~e~~~~~ee~~enqvVp~ 138 (264)
.+.|...+++.++ .+|++++++|+||+-++..-+.|++.=.+=-+|-+|
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 461 (520)
T PHA03346 395 PRGPPENEDEADGGGGLAPPPEPPRPPPPPFPDDDDEGDDEDDDDWEDLGFDLDEDDVYDLKDVDEW 461 (520)
T ss_pred CCCCCCcccccccccCcCCCCCCCCCCCCCCCCcccccccccccccccCCccccccccccchhhhhh
No 499
>PF01056 Myc_N: Myc amino-terminal region; InterPro: IPR012682 The class III basic helix-turn-helix (bHLH) transcription factors have proliferative and apoptotic roles and are characterised by the presence of a leucine zipper adjacent to the bHLH domain. The myc oncogene gene was first discovered in small-cell lung cancer cell lines where it is found to be deregulated []. Although the biochemical function of the gene product is unknown, as a nuclear protein with a short half-life it may play a direct or indirect role in controlling gene expression []. Myc forms a heterodimer with Max, and this complex regulates cell growth through direct activation of genes involved in cell replication []. This entry represents the N-terminal domain found adjacent to the basic helix-loop-helix (bHLH) region (IPR001092 from INTERPRO).; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 1EE4_C.
Probab=22.11 E-value=30 Score=33.70 Aligned_cols=27 Identities=41% Similarity=0.705 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCcchhhccccCCcee
Q 024658 110 EDEDDDDDDDEDPDEEEEEEDDENQVV 136 (264)
Q Consensus 110 ~ded~~~dd~e~e~~~~~ee~~enqvV 136 (264)
....+...++++++++++||++|.-||
T Consensus 221 ssgsd~~s~~~~~~~eeeeeeEEIDVV 247 (329)
T PF01056_consen 221 SSGSDSESDSDEEEEEEEEEEEEIDVV 247 (329)
T ss_dssp ---------------------------
T ss_pred ccccccccccccccccccCCCcceEEE
No 500
>KOG2675 consensus Adenylate cyclase-associated protein (CAP/Srv2p) [Cytoskeleton; Signal transduction mechanisms]
Probab=22.03 E-value=79 Score=32.44 Aligned_cols=33 Identities=27% Similarity=0.447 Sum_probs=0.0
Q ss_pred ecCCCCCCCCCCCCCCCCCC-------CCCCccccchhhh
Q 024658 136 VPWSGDDSQSPPQPPPPPVS-------SSCSSISEEDFSL 168 (264)
Q Consensus 136 Vp~s~~~~~~~~~~~pp~~s-------sss~~~~~~~~~~ 168 (264)
.+.++++..+||+||||++. ++++....+-.+|
T Consensus 228 ~~~s~~g~PPPPPP~PPp~~~~~~~~~~~~~~~k~~~~Al 267 (480)
T KOG2675|consen 228 KAASAPGAPPPPPPAPPPAPFFADSNPPSSDANKGGRGAL 267 (480)
T ss_pred CcccCCCCCCCCCCCCCCcccccccCCCCcccccccHHHH
Done!